Query 017428
Match_columns 371
No_of_seqs 384 out of 3327
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 14:16:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bus_A REBM, methyltransferase 100.0 5.6E-28 1.9E-32 219.6 25.9 222 97-331 7-228 (273)
2 2o57_A Putative sarcosine dime 100.0 2.7E-28 9.3E-33 224.5 20.9 224 92-331 16-246 (297)
3 1kpg_A CFA synthase;, cyclopro 100.0 1.2E-26 4.3E-31 212.3 24.2 216 96-323 9-232 (287)
4 3hem_A Cyclopropane-fatty-acyl 100.0 6.5E-27 2.2E-31 215.9 22.4 261 93-369 14-293 (302)
5 2fk8_A Methoxy mycolic acid sy 99.9 3.2E-25 1.1E-29 206.0 19.3 218 93-322 32-257 (318)
6 3vc1_A Geranyl diphosphate 2-C 99.9 3E-23 1E-27 192.2 18.9 176 140-329 103-279 (312)
7 1nkv_A Hypothetical protein YJ 99.9 2.2E-22 7.5E-27 180.8 18.6 164 141-319 24-187 (256)
8 1vl5_A Unknown conserved prote 99.9 3E-22 1E-26 180.5 18.4 169 142-323 26-194 (260)
9 3ujc_A Phosphoethanolamine N-m 99.9 1.2E-22 4.2E-27 183.2 15.4 167 141-324 43-211 (266)
10 4gek_A TRNA (CMO5U34)-methyltr 99.9 3.1E-22 1.1E-26 180.3 17.8 153 158-316 70-242 (261)
11 3f4k_A Putative methyltransfer 99.9 2.3E-21 7.7E-26 174.2 22.0 154 158-322 46-199 (257)
12 1xxl_A YCGJ protein; structura 99.9 1.9E-21 6.6E-26 173.1 20.7 170 141-323 9-178 (239)
13 3mgg_A Methyltransferase; NYSG 99.9 5.8E-22 2E-26 180.1 17.0 168 158-328 37-207 (276)
14 3kkz_A Uncharacterized protein 99.9 9.6E-22 3.3E-26 177.9 18.4 153 158-321 46-198 (267)
15 3dtn_A Putative methyltransfer 99.9 1.7E-22 5.8E-27 179.1 12.0 170 143-324 33-219 (234)
16 4htf_A S-adenosylmethionine-de 99.9 1.1E-21 3.7E-26 179.3 17.5 176 140-323 56-236 (285)
17 3dh0_A SAM dependent methyltra 99.9 3.5E-21 1.2E-25 168.8 19.5 156 143-322 27-184 (219)
18 3gu3_A Methyltransferase; alph 99.9 3.8E-21 1.3E-25 175.6 20.5 164 158-326 22-201 (284)
19 3hnr_A Probable methyltransfer 99.9 1.7E-22 5.8E-27 177.3 10.5 150 159-319 46-201 (220)
20 3bkx_A SAM-dependent methyltra 99.9 7.3E-21 2.5E-25 172.7 20.6 184 134-324 24-224 (275)
21 3ege_A Putative methyltransfer 99.9 3.2E-22 1.1E-26 180.6 11.5 164 141-326 22-185 (261)
22 3dlc_A Putative S-adenosyl-L-m 99.9 1.2E-21 4E-26 171.4 14.7 168 141-320 32-204 (219)
23 3h2b_A SAM-dependent methyltra 99.9 7.9E-22 2.7E-26 170.9 13.0 179 98-321 4-184 (203)
24 3l8d_A Methyltransferase; stru 99.9 2.7E-21 9.3E-26 172.1 15.6 149 158-320 53-201 (242)
25 3ou2_A SAM-dependent methyltra 99.9 1.4E-20 4.8E-25 164.6 18.8 189 94-319 6-205 (218)
26 4fsd_A Arsenic methyltransfera 99.9 4.8E-21 1.6E-25 182.4 16.9 154 157-318 82-250 (383)
27 2ex4_A Adrenal gland protein A 99.9 4.2E-21 1.4E-25 171.0 15.1 198 92-321 27-227 (241)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.9 7.9E-21 2.7E-25 170.3 16.7 188 96-320 50-239 (254)
29 2yqz_A Hypothetical protein TT 99.9 7.8E-21 2.7E-25 171.1 15.4 155 158-321 39-198 (263)
30 2p7i_A Hypothetical protein; p 99.8 1.2E-20 4.3E-25 168.1 15.8 152 159-319 43-199 (250)
31 3ocj_A Putative exported prote 99.8 3.3E-20 1.1E-24 171.2 17.9 162 158-320 118-292 (305)
32 3lcc_A Putative methyl chlorid 99.8 1.6E-20 5.5E-25 166.6 14.9 145 159-325 67-213 (235)
33 1pjz_A Thiopurine S-methyltran 99.8 1.5E-20 5.3E-25 163.0 13.5 154 142-321 11-178 (203)
34 3ccf_A Cyclopropane-fatty-acyl 99.8 3.2E-20 1.1E-24 169.0 16.1 163 144-323 48-214 (279)
35 2p35_A Trans-aconitate 2-methy 99.8 1.3E-19 4.4E-24 162.9 18.1 157 141-314 21-185 (259)
36 1ri5_A MRNA capping enzyme; me 99.8 1.1E-19 3.8E-24 166.6 17.9 166 158-323 64-254 (298)
37 3dli_A Methyltransferase; PSI- 99.8 6.5E-20 2.2E-24 163.2 15.6 141 158-320 41-185 (240)
38 3sm3_A SAM-dependent methyltra 99.8 1.1E-19 3.8E-24 160.6 16.8 160 158-321 30-209 (235)
39 4hg2_A Methyltransferase type 99.8 3.9E-20 1.3E-24 166.0 13.5 100 159-267 40-139 (257)
40 3g5l_A Putative S-adenosylmeth 99.8 5.1E-20 1.7E-24 165.1 14.2 160 158-322 44-219 (253)
41 3g5t_A Trans-aconitate 3-methy 99.8 3.9E-19 1.3E-23 163.5 20.2 160 158-321 36-211 (299)
42 3e23_A Uncharacterized protein 99.8 6.9E-20 2.4E-24 159.7 14.3 139 158-321 43-184 (211)
43 3gwz_A MMCR; methyltransferase 99.8 1.6E-18 5.5E-23 164.1 23.8 162 142-318 191-355 (369)
44 3i53_A O-methyltransferase; CO 99.8 7.2E-19 2.4E-23 164.1 19.8 151 158-320 169-322 (332)
45 3e8s_A Putative SAM dependent 99.8 1.5E-20 5.1E-25 165.3 7.9 153 159-321 53-211 (227)
46 3fpf_A Mtnas, putative unchara 99.8 4.3E-19 1.5E-23 160.3 17.2 161 90-264 60-223 (298)
47 1x19_A CRTF-related protein; m 99.8 6E-19 2.1E-23 166.4 19.0 166 141-320 178-349 (359)
48 2aot_A HMT, histamine N-methyl 99.8 1.6E-19 5.6E-24 165.5 14.3 148 158-316 52-218 (292)
49 3jwh_A HEN1; methyltransferase 99.8 2E-19 6.8E-24 157.5 14.1 148 159-315 30-188 (217)
50 3i9f_A Putative type 11 methyl 99.8 1.2E-19 4E-24 152.7 11.7 133 159-321 18-150 (170)
51 4e2x_A TCAB9; kijanose, tetron 99.8 2.8E-20 9.6E-25 179.0 8.7 164 134-321 88-255 (416)
52 3g2m_A PCZA361.24; SAM-depende 99.8 9.2E-20 3.1E-24 167.7 11.7 174 141-323 71-278 (299)
53 3dp7_A SAM-dependent methyltra 99.8 3.6E-19 1.2E-23 168.2 15.7 157 159-318 180-341 (363)
54 2r3s_A Uncharacterized protein 99.8 1.4E-18 4.8E-23 162.2 19.4 168 142-321 152-325 (335)
55 3jwg_A HEN1, methyltransferase 99.8 2.3E-19 7.7E-24 157.3 13.2 149 159-316 30-189 (219)
56 1vlm_A SAM-dependent methyltra 99.8 6.8E-19 2.3E-23 154.4 15.4 138 159-319 48-188 (219)
57 2gs9_A Hypothetical protein TT 99.8 1E-18 3.5E-23 152.1 16.2 131 158-310 36-171 (211)
58 3pfg_A N-methyltransferase; N, 99.8 6E-19 2.1E-23 159.0 15.0 100 159-266 51-154 (263)
59 3bkw_A MLL3908 protein, S-aden 99.8 1.9E-18 6.6E-23 153.5 17.8 154 158-320 43-215 (243)
60 2a14_A Indolethylamine N-methy 99.8 4.8E-20 1.6E-24 166.5 6.9 148 158-320 55-239 (263)
61 1y8c_A S-adenosylmethionine-de 99.8 1.1E-18 3.7E-23 155.3 15.3 103 158-264 37-143 (246)
62 2xvm_A Tellurite resistance pr 99.8 1.9E-18 6.6E-23 148.7 16.3 139 159-319 33-173 (199)
63 1qzz_A RDMB, aclacinomycin-10- 99.8 3.3E-18 1.1E-22 162.2 19.1 165 143-321 172-341 (374)
64 2gb4_A Thiopurine S-methyltran 99.8 1.1E-18 3.8E-23 156.2 13.8 143 158-321 68-229 (252)
65 1ve3_A Hypothetical protein PH 99.8 8.6E-19 2.9E-23 154.2 12.8 104 159-265 39-144 (227)
66 3cc8_A Putative methyltransfer 99.8 3.5E-18 1.2E-22 150.3 16.6 146 158-323 32-189 (230)
67 3g07_A 7SK snRNA methylphospha 99.8 3E-19 1E-23 163.7 9.7 152 158-318 46-268 (292)
68 3lst_A CALO1 methyltransferase 99.8 3.3E-18 1.1E-22 160.7 16.5 160 142-318 173-335 (348)
69 2g72_A Phenylethanolamine N-me 99.8 9.6E-19 3.3E-23 160.0 12.5 149 158-321 71-258 (289)
70 2kw5_A SLR1183 protein; struct 99.8 3.3E-18 1.1E-22 147.8 14.8 145 159-323 31-175 (202)
71 3mcz_A O-methyltransferase; ad 99.8 4.5E-18 1.5E-22 160.0 16.0 152 159-316 180-336 (352)
72 2ip2_A Probable phenazine-spec 99.8 8.7E-18 3E-22 156.9 17.6 163 142-319 157-322 (334)
73 2p8j_A S-adenosylmethionine-de 99.8 2.1E-19 7.3E-24 156.1 5.6 156 158-318 23-182 (209)
74 1tw3_A COMT, carminomycin 4-O- 99.8 1.4E-17 4.9E-22 157.0 18.4 164 143-320 173-340 (360)
75 3ggd_A SAM-dependent methyltra 99.8 4.3E-18 1.5E-22 151.7 13.6 159 158-327 56-227 (245)
76 3bxo_A N,N-dimethyltransferase 99.8 1.1E-17 3.9E-22 148.2 15.8 101 159-267 41-145 (239)
77 3d2l_A SAM-dependent methyltra 99.8 9.4E-18 3.2E-22 149.1 15.2 100 159-263 34-137 (243)
78 3thr_A Glycine N-methyltransfe 99.8 9.4E-18 3.2E-22 153.6 15.1 105 159-264 58-176 (293)
79 3reo_A (ISO)eugenol O-methyltr 99.8 3.7E-17 1.3E-21 154.6 18.8 151 158-321 203-357 (368)
80 3p9c_A Caffeic acid O-methyltr 99.7 5.2E-17 1.8E-21 153.3 19.5 163 141-321 188-355 (364)
81 3e05_A Precorrin-6Y C5,15-meth 99.7 8.8E-17 3E-21 139.2 19.4 135 143-317 30-165 (204)
82 3orh_A Guanidinoacetate N-meth 99.7 4.5E-19 1.5E-23 157.4 4.8 104 158-263 60-170 (236)
83 2i62_A Nicotinamide N-methyltr 99.7 7.9E-18 2.7E-22 151.6 13.0 149 158-322 56-242 (265)
84 2avn_A Ubiquinone/menaquinone 99.7 9E-18 3.1E-22 151.2 12.3 152 159-322 55-216 (260)
85 3njr_A Precorrin-6Y methylase; 99.7 9.1E-17 3.1E-21 139.3 17.6 134 144-318 46-179 (204)
86 2qe6_A Uncharacterized protein 99.7 9.4E-17 3.2E-21 145.5 18.2 162 137-315 60-238 (274)
87 1wzn_A SAM-dependent methyltra 99.7 4.9E-17 1.7E-21 145.4 15.6 117 139-264 27-146 (252)
88 4a6d_A Hydroxyindole O-methylt 99.7 7.1E-17 2.4E-21 151.7 16.8 164 143-320 169-335 (353)
89 3cgg_A SAM-dependent methyltra 99.7 5.3E-17 1.8E-21 138.9 14.6 126 158-318 46-174 (195)
90 2vdw_A Vaccinia virus capping 99.7 3E-17 1E-21 150.8 13.8 165 158-322 48-249 (302)
91 3m70_A Tellurite resistance pr 99.7 4.7E-17 1.6E-21 148.5 14.9 137 159-318 121-259 (286)
92 3ofk_A Nodulation protein S; N 99.7 2.5E-17 8.7E-22 143.8 12.2 102 158-264 51-155 (216)
93 3hm2_A Precorrin-6Y C5,15-meth 99.7 6.6E-17 2.3E-21 136.5 14.4 136 141-317 13-151 (178)
94 1zx0_A Guanidinoacetate N-meth 99.7 3.8E-18 1.3E-22 151.4 6.4 105 158-264 60-171 (236)
95 1fp1_D Isoliquiritigenin 2'-O- 99.7 6.5E-17 2.2E-21 153.2 14.8 158 142-319 197-360 (372)
96 2zfu_A Nucleomethylin, cerebra 99.7 2.2E-17 7.7E-22 144.1 10.2 113 158-319 67-179 (215)
97 1yzh_A TRNA (guanine-N(7)-)-me 99.7 4.3E-16 1.5E-20 136.0 15.8 104 159-263 42-156 (214)
98 3grz_A L11 mtase, ribosomal pr 99.7 1.7E-16 5.9E-21 137.4 13.1 126 158-319 60-185 (205)
99 1fp2_A Isoflavone O-methyltran 99.7 2E-16 6.9E-21 148.7 14.2 146 159-318 189-340 (352)
100 3mti_A RRNA methylase; SAM-dep 99.7 1.8E-16 6E-21 135.0 11.7 106 158-265 22-137 (185)
101 3evz_A Methyltransferase; NYSG 99.7 5.6E-16 1.9E-20 136.6 15.3 129 158-317 55-204 (230)
102 2b3t_A Protein methyltransfera 99.7 8.2E-16 2.8E-20 139.6 16.7 140 139-317 96-261 (276)
103 1xdz_A Methyltransferase GIDB; 99.7 1.5E-16 5.1E-21 141.5 11.5 132 158-322 70-205 (240)
104 3mq2_A 16S rRNA methyltransfer 99.7 3.5E-17 1.2E-21 143.2 7.0 148 158-322 27-187 (218)
105 3p2e_A 16S rRNA methylase; met 99.7 2.5E-17 8.5E-22 145.0 6.0 153 158-323 24-189 (225)
106 3m33_A Uncharacterized protein 99.7 1.6E-16 5.6E-21 139.9 11.0 120 158-321 48-169 (226)
107 3lpm_A Putative methyltransfer 99.7 5.5E-16 1.9E-20 139.4 14.5 130 159-319 50-201 (259)
108 3bgv_A MRNA CAP guanine-N7 met 99.7 5.2E-16 1.8E-20 143.5 14.7 108 158-265 34-157 (313)
109 3p9n_A Possible methyltransfer 99.7 9.8E-16 3.3E-20 131.0 15.1 108 158-266 44-156 (189)
110 3eey_A Putative rRNA methylase 99.7 2.9E-16 1E-20 135.1 11.5 108 158-265 22-141 (197)
111 4df3_A Fibrillarin-like rRNA/T 99.7 1.1E-15 3.7E-20 134.0 15.1 143 152-320 71-218 (233)
112 1fbn_A MJ fibrillarin homologu 99.7 5.2E-16 1.8E-20 137.1 13.1 133 158-320 74-214 (230)
113 1dus_A MJ0882; hypothetical pr 99.7 1E-15 3.6E-20 130.6 14.4 118 141-265 40-159 (194)
114 2fca_A TRNA (guanine-N(7)-)-me 99.7 7.3E-16 2.5E-20 134.5 13.5 104 159-263 39-153 (213)
115 3uwp_A Histone-lysine N-methyl 99.7 2.9E-16 9.9E-21 147.0 11.1 124 138-267 158-292 (438)
116 1l3i_A Precorrin-6Y methyltran 99.7 9.6E-16 3.3E-20 130.6 13.1 131 143-313 23-154 (192)
117 3giw_A Protein of unknown func 99.7 7.2E-16 2.5E-20 137.7 12.6 164 137-315 61-243 (277)
118 3mb5_A SAM-dependent methyltra 99.7 1E-15 3.5E-20 137.1 13.7 136 143-319 83-222 (255)
119 3lbf_A Protein-L-isoaspartate 99.7 1.5E-15 5.2E-20 131.9 14.2 112 141-265 65-176 (210)
120 3dxy_A TRNA (guanine-N(7)-)-me 99.6 4E-16 1.4E-20 136.6 10.4 104 159-263 35-150 (218)
121 3q87_B N6 adenine specific DNA 99.6 1.2E-15 3.9E-20 128.4 12.8 120 159-322 24-152 (170)
122 2yxd_A Probable cobalt-precorr 99.6 3.1E-15 1.1E-19 126.5 15.6 132 141-316 23-154 (183)
123 2h00_A Methyltransferase 10 do 99.6 1E-16 3.5E-21 143.7 6.6 150 158-321 65-240 (254)
124 3htx_A HEN1; HEN1, small RNA m 99.6 4E-15 1.4E-19 149.1 18.1 105 159-265 722-836 (950)
125 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.7E-15 5.7E-20 135.8 13.8 135 143-318 86-223 (258)
126 3g89_A Ribosomal RNA small sub 99.6 7.1E-16 2.4E-20 137.8 10.6 132 158-322 80-215 (249)
127 1jsx_A Glucose-inhibited divis 99.6 2.4E-15 8.2E-20 130.3 13.6 99 159-263 66-165 (207)
128 2frn_A Hypothetical protein PH 99.6 2.7E-15 9.1E-20 136.3 14.4 129 158-315 125-253 (278)
129 1yb2_A Hypothetical protein TA 99.6 1E-15 3.5E-20 138.9 11.5 133 144-318 101-236 (275)
130 1zg3_A Isoflavanone 4'-O-methy 99.6 1.5E-15 5.1E-20 143.1 13.0 148 159-319 194-347 (358)
131 2fyt_A Protein arginine N-meth 99.6 2.8E-15 9.5E-20 140.1 14.3 102 158-260 64-168 (340)
132 2pxx_A Uncharacterized protein 99.6 6.9E-16 2.4E-20 134.2 9.3 105 158-265 42-161 (215)
133 2nxc_A L11 mtase, ribosomal pr 99.6 2.4E-15 8.2E-20 134.8 13.0 124 158-318 120-243 (254)
134 4dzr_A Protein-(glutamine-N5) 99.6 1.6E-16 5.5E-21 138.1 4.7 143 139-318 15-191 (215)
135 3q7e_A Protein arginine N-meth 99.6 3E-15 1E-19 140.4 13.1 103 158-261 66-171 (349)
136 3iv6_A Putative Zn-dependent a 99.6 2.6E-15 8.9E-20 134.2 11.8 112 141-263 33-148 (261)
137 3dmg_A Probable ribosomal RNA 99.6 2.3E-15 7.9E-20 142.4 11.9 140 158-323 233-377 (381)
138 3fzg_A 16S rRNA methylase; met 99.6 4.4E-16 1.5E-20 130.6 5.7 103 158-263 49-152 (200)
139 3u81_A Catechol O-methyltransf 99.6 2.7E-15 9.1E-20 131.6 10.8 106 159-265 59-172 (221)
140 3ntv_A MW1564 protein; rossman 99.6 9.2E-15 3.1E-19 129.2 14.3 104 159-265 72-178 (232)
141 3tfw_A Putative O-methyltransf 99.6 1.3E-14 4.6E-19 129.5 15.5 104 159-265 64-172 (248)
142 1o54_A SAM-dependent O-methylt 99.6 5.8E-15 2E-19 134.0 13.2 135 143-318 102-238 (277)
143 3bzb_A Uncharacterized protein 99.6 1.9E-14 6.5E-19 130.9 16.2 134 159-318 80-236 (281)
144 3r0q_C Probable protein argini 99.6 5.8E-15 2E-19 139.8 13.0 103 158-263 63-169 (376)
145 3lec_A NADB-rossmann superfami 99.6 9.5E-15 3.2E-19 127.5 13.3 126 158-317 21-147 (230)
146 3dr5_A Putative O-methyltransf 99.6 5.4E-15 1.8E-19 129.6 11.7 120 138-265 41-165 (221)
147 2ift_A Putative methylase HI07 99.6 3E-15 1E-19 129.3 9.7 106 159-265 54-165 (201)
148 1nt2_A Fibrillarin-like PRE-rR 99.6 1.1E-14 3.6E-19 126.8 13.1 100 158-263 57-161 (210)
149 1u2z_A Histone-lysine N-methyl 99.6 1.2E-14 4.1E-19 138.7 14.6 119 140-264 229-360 (433)
150 1dl5_A Protein-L-isoaspartate 99.6 1.2E-14 4.2E-19 134.5 14.2 112 141-264 63-176 (317)
151 2esr_A Methyltransferase; stru 99.6 1.9E-15 6.4E-20 127.7 7.9 120 141-266 18-141 (177)
152 2yxe_A Protein-L-isoaspartate 99.6 1.7E-14 5.7E-19 125.8 14.2 112 141-264 65-178 (215)
153 2b25_A Hypothetical protein; s 99.6 5.3E-15 1.8E-19 138.1 11.7 160 143-320 95-282 (336)
154 2ipx_A RRNA 2'-O-methyltransfe 99.6 8.7E-15 3E-19 129.3 12.5 101 158-263 77-182 (233)
155 2fhp_A Methylase, putative; al 99.6 4.7E-15 1.6E-19 126.1 10.3 109 158-267 44-158 (187)
156 3kr9_A SAM-dependent methyltra 99.6 1.5E-14 5E-19 126.1 13.4 125 158-317 15-141 (225)
157 1g6q_1 HnRNP arginine N-methyl 99.6 1.1E-14 3.7E-19 135.5 13.4 102 159-261 39-143 (328)
158 3duw_A OMT, O-methyltransferas 99.6 1.9E-14 6.4E-19 126.2 14.2 104 159-265 59-169 (223)
159 3ckk_A TRNA (guanine-N(7)-)-me 99.6 5.9E-15 2E-19 130.6 11.0 105 158-263 46-168 (235)
160 1vbf_A 231AA long hypothetical 99.6 1.6E-14 5.6E-19 127.2 13.7 110 141-265 58-167 (231)
161 2y1w_A Histone-arginine methyl 99.6 1.3E-14 4.5E-19 136.0 13.8 116 141-263 38-155 (348)
162 2ld4_A Anamorsin; methyltransf 99.6 3.5E-15 1.2E-19 126.0 8.9 113 158-311 12-128 (176)
163 3gdh_A Trimethylguanosine synt 99.6 4.2E-16 1.4E-20 138.5 2.9 139 159-319 79-219 (241)
164 4azs_A Methyltransferase WBDD; 99.6 2.6E-15 8.8E-20 149.7 8.8 106 159-266 67-176 (569)
165 3gnl_A Uncharacterized protein 99.6 1.5E-14 5.3E-19 127.2 12.5 126 158-317 21-147 (244)
166 2fpo_A Methylase YHHF; structu 99.6 6.9E-15 2.4E-19 127.2 10.1 105 159-265 55-162 (202)
167 1af7_A Chemotaxis receptor met 99.6 5.3E-15 1.8E-19 133.4 9.6 104 159-262 106-251 (274)
168 3r3h_A O-methyltransferase, SA 99.6 9.6E-15 3.3E-19 129.9 11.0 107 159-268 61-175 (242)
169 3bwc_A Spermidine synthase; SA 99.6 1.8E-14 6.3E-19 132.4 12.4 138 159-322 96-243 (304)
170 3hp7_A Hemolysin, putative; st 99.6 2.1E-14 7.1E-19 129.9 12.5 154 141-321 72-234 (291)
171 2gpy_A O-methyltransferase; st 99.6 2.5E-14 8.7E-19 126.3 12.8 104 159-265 55-162 (233)
172 4dcm_A Ribosomal RNA large sub 99.6 2.4E-14 8.3E-19 135.2 13.0 113 145-263 214-334 (375)
173 1ixk_A Methyltransferase; open 99.6 2.6E-14 9E-19 132.0 12.7 132 158-317 118-273 (315)
174 1i9g_A Hypothetical protein RV 99.5 3E-14 1E-18 129.3 12.7 113 142-264 88-204 (280)
175 2ozv_A Hypothetical protein AT 99.5 1.9E-14 6.4E-19 129.4 11.0 106 158-263 36-170 (260)
176 2yvl_A TRMI protein, hypotheti 99.5 1.2E-13 4E-18 123.0 15.8 110 143-263 81-190 (248)
177 1i1n_A Protein-L-isoaspartate 99.5 8.2E-14 2.8E-18 122.3 14.6 101 158-264 77-183 (226)
178 3id6_C Fibrillarin-like rRNA/T 99.5 2E-13 6.9E-18 119.9 16.9 136 157-319 75-216 (232)
179 1o9g_A RRNA methyltransferase; 99.5 1.7E-14 5.6E-19 129.0 10.2 121 139-264 37-215 (250)
180 1jg1_A PIMT;, protein-L-isoasp 99.5 5.1E-14 1.7E-18 124.6 13.1 111 141-264 79-190 (235)
181 3c3p_A Methyltransferase; NP_9 99.5 2.8E-14 9.5E-19 124.0 11.2 103 159-265 57-162 (210)
182 3tr6_A O-methyltransferase; ce 99.5 3E-14 1E-18 125.0 10.7 105 159-266 65-177 (225)
183 3b3j_A Histone-arginine methyl 99.5 3.4E-14 1.1E-18 138.3 11.9 117 139-262 144-262 (480)
184 1ws6_A Methyltransferase; stru 99.5 9.4E-15 3.2E-19 122.3 6.5 103 159-266 42-150 (171)
185 1sui_A Caffeoyl-COA O-methyltr 99.5 4.8E-14 1.6E-18 125.7 11.3 103 159-264 80-191 (247)
186 1g8a_A Fibrillarin-like PRE-rR 99.5 2.1E-13 7.2E-18 119.8 15.4 135 158-320 73-213 (227)
187 2pbf_A Protein-L-isoaspartate 99.5 7.1E-14 2.4E-18 122.8 12.3 101 158-264 80-194 (227)
188 3tma_A Methyltransferase; thum 99.5 2.6E-13 8.9E-18 127.5 16.5 117 141-263 191-317 (354)
189 2vdv_E TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.8E-18 123.3 12.7 105 158-263 49-173 (246)
190 1ej0_A FTSJ; methyltransferase 99.5 5.7E-14 1.9E-18 117.9 10.0 96 158-265 22-138 (180)
191 1p91_A Ribosomal RNA large sub 99.5 1.7E-13 6E-18 123.5 13.9 96 158-266 85-181 (269)
192 1r18_A Protein-L-isoaspartate( 99.5 6.3E-14 2.2E-18 123.3 10.4 100 158-264 84-195 (227)
193 4hc4_A Protein arginine N-meth 99.5 1.1E-13 3.8E-18 129.9 12.6 101 159-261 84-187 (376)
194 2pjd_A Ribosomal RNA small sub 99.5 6.8E-14 2.3E-18 130.9 10.8 102 159-264 197-304 (343)
195 3opn_A Putative hemolysin; str 99.5 1.1E-14 3.6E-19 128.6 4.7 155 141-321 24-186 (232)
196 2igt_A SAM dependent methyltra 99.5 1.1E-13 3.9E-18 128.5 11.6 106 159-265 154-274 (332)
197 2bm8_A Cephalosporin hydroxyla 99.5 1.1E-13 3.6E-18 122.6 10.0 97 159-264 82-188 (236)
198 3cbg_A O-methyltransferase; cy 99.5 1.6E-13 5.4E-18 121.2 10.8 105 159-266 73-185 (232)
199 2qm3_A Predicted methyltransfe 99.5 1.1E-12 3.7E-17 124.1 17.2 103 158-263 172-277 (373)
200 3sso_A Methyltransferase; macr 99.5 3.9E-14 1.3E-18 132.3 6.9 96 159-265 217-326 (419)
201 2hnk_A SAM-dependent O-methylt 99.5 2.4E-13 8.2E-18 120.5 11.6 104 159-265 61-183 (239)
202 3tm4_A TRNA (guanine N2-)-meth 99.5 5.1E-13 1.7E-17 126.3 14.1 126 158-318 217-351 (373)
203 3c3y_A Pfomt, O-methyltransfer 99.5 2.1E-13 7.3E-18 120.8 10.8 103 159-264 71-182 (237)
204 1nv8_A HEMK protein; class I a 99.5 3.2E-13 1.1E-17 122.8 12.2 101 159-262 124-248 (284)
205 2avd_A Catechol-O-methyltransf 99.5 3.9E-13 1.3E-17 118.1 11.9 104 159-265 70-181 (229)
206 3a27_A TYW2, uncharacterized p 99.5 2.5E-13 8.5E-18 122.9 10.7 102 158-265 119-221 (272)
207 2plw_A Ribosomal RNA methyltra 99.4 4.2E-13 1.4E-17 115.5 11.5 95 158-264 22-155 (201)
208 3k6r_A Putative transferase PH 99.4 7.9E-13 2.7E-17 119.1 13.4 128 158-314 125-252 (278)
209 2yxl_A PH0851 protein, 450AA l 99.4 1.9E-12 6.4E-17 125.4 16.3 107 158-265 259-391 (450)
210 3ajd_A Putative methyltransfer 99.4 5.5E-13 1.9E-17 120.7 10.5 107 158-265 83-213 (274)
211 1zq9_A Probable dimethyladenos 99.4 4.7E-13 1.6E-17 121.8 9.0 88 141-236 16-103 (285)
212 3adn_A Spermidine synthase; am 99.4 6.6E-13 2.2E-17 121.1 9.3 105 159-263 84-198 (294)
213 1wy7_A Hypothetical protein PH 99.4 1.1E-11 3.6E-16 107.2 16.0 127 158-321 49-177 (207)
214 3dou_A Ribosomal RNA large sub 99.4 2.7E-12 9.1E-17 109.8 11.0 107 141-264 12-140 (191)
215 1xj5_A Spermidine synthase 1; 99.4 1.8E-12 6.3E-17 120.2 10.5 105 159-263 121-235 (334)
216 3gjy_A Spermidine synthase; AP 99.4 1.8E-12 6.3E-17 118.5 9.9 105 159-264 90-201 (317)
217 3m6w_A RRNA methylase; rRNA me 99.3 1.9E-12 6.5E-17 124.7 9.8 106 158-265 101-231 (464)
218 2nyu_A Putative ribosomal RNA 99.3 5.9E-12 2E-16 107.7 11.8 95 158-264 22-146 (196)
219 2o07_A Spermidine synthase; st 99.3 2.1E-12 7.3E-17 118.4 9.2 106 159-264 96-210 (304)
220 2f8l_A Hypothetical protein LM 99.3 1.7E-11 5.7E-16 114.6 15.4 103 159-264 131-257 (344)
221 1ne2_A Hypothetical protein TA 99.3 1.1E-11 3.8E-16 106.5 13.0 87 158-253 51-139 (200)
222 2frx_A Hypothetical protein YE 99.3 1.2E-11 4.3E-16 120.0 14.6 108 158-266 117-249 (479)
223 2b2c_A Spermidine synthase; be 99.3 6.9E-13 2.4E-17 122.1 5.3 104 159-263 109-222 (314)
224 3m4x_A NOL1/NOP2/SUN family pr 99.3 2.7E-12 9.1E-17 123.5 9.6 107 158-265 105-236 (456)
225 2oxt_A Nucleoside-2'-O-methylt 99.3 6E-13 2.1E-17 119.6 4.8 102 158-265 74-187 (265)
226 1uir_A Polyamine aminopropyltr 99.3 1.5E-12 5E-17 120.2 7.5 105 159-263 78-195 (314)
227 2wa2_A Non-structural protein 99.3 3.2E-13 1.1E-17 122.0 2.8 102 158-265 82-195 (276)
228 1inl_A Spermidine synthase; be 99.3 1.9E-12 6.4E-17 118.5 7.5 105 159-263 91-205 (296)
229 2b78_A Hypothetical protein SM 99.3 1.6E-12 5.4E-17 123.3 7.1 106 159-264 213-332 (385)
230 1iy9_A Spermidine synthase; ro 99.3 3E-12 1E-16 115.8 8.6 105 159-263 76-189 (275)
231 1uwv_A 23S rRNA (uracil-5-)-me 99.3 6E-11 2.1E-15 114.2 17.9 118 135-263 268-389 (433)
232 2pt6_A Spermidine synthase; tr 99.3 1.4E-12 4.7E-17 120.6 5.7 105 159-263 117-230 (321)
233 3c0k_A UPF0064 protein YCCW; P 99.3 3.8E-12 1.3E-16 121.3 8.9 106 159-264 221-340 (396)
234 1sqg_A SUN protein, FMU protei 99.3 1.5E-11 5.1E-16 118.4 12.5 106 158-265 246-376 (429)
235 3v97_A Ribosomal RNA large sub 99.3 5.3E-12 1.8E-16 128.3 9.8 105 159-263 540-657 (703)
236 2yx1_A Hypothetical protein MJ 99.3 8E-12 2.7E-16 116.4 10.2 99 159-266 196-294 (336)
237 4dmg_A Putative uncharacterize 99.3 6.6E-12 2.3E-16 119.0 8.9 105 158-265 214-328 (393)
238 2i7c_A Spermidine synthase; tr 99.3 6.8E-12 2.3E-16 114.0 8.7 105 159-263 79-192 (283)
239 2as0_A Hypothetical protein PH 99.3 4.4E-12 1.5E-16 120.9 7.6 108 158-265 217-337 (396)
240 3lcv_B Sisomicin-gentamicin re 99.3 7.7E-12 2.6E-16 109.7 8.2 101 159-263 133-236 (281)
241 1wxx_A TT1595, hypothetical pr 99.3 3E-12 1E-16 121.5 5.6 104 159-264 210-326 (382)
242 3frh_A 16S rRNA methylase; met 99.3 2E-11 6.8E-16 106.1 10.1 101 158-263 105-206 (253)
243 2h1r_A Dimethyladenosine trans 99.3 2.8E-11 9.6E-16 110.8 11.7 88 141-237 30-117 (299)
244 1mjf_A Spermidine synthase; sp 99.3 3.9E-12 1.3E-16 115.5 5.9 103 159-263 76-193 (281)
245 2xyq_A Putative 2'-O-methyl tr 99.2 2.8E-11 9.6E-16 109.6 10.3 113 158-317 63-195 (290)
246 2cmg_A Spermidine synthase; tr 99.2 7.5E-12 2.6E-16 112.3 5.9 96 159-263 73-171 (262)
247 1qam_A ERMC' methyltransferase 99.2 6.2E-12 2.1E-16 111.8 4.8 83 141-233 18-101 (244)
248 3b5i_A S-adenosyl-L-methionine 99.2 8.2E-10 2.8E-14 103.3 18.6 187 137-323 31-302 (374)
249 2p41_A Type II methyltransfera 99.2 6.1E-12 2.1E-16 115.3 3.8 100 158-264 82-192 (305)
250 3gru_A Dimethyladenosine trans 99.2 1.3E-10 4.6E-15 105.6 12.0 87 141-236 38-124 (295)
251 2jjq_A Uncharacterized RNA met 99.2 4.5E-10 1.5E-14 107.6 15.7 97 159-263 291-387 (425)
252 3k0b_A Predicted N6-adenine-sp 99.2 3.5E-10 1.2E-14 107.2 13.8 119 140-264 188-351 (393)
253 3ldg_A Putative uncharacterize 99.1 4.3E-10 1.5E-14 106.1 14.3 119 140-264 181-344 (384)
254 1yub_A Ermam, rRNA methyltrans 99.1 2.3E-13 7.9E-18 121.2 -8.0 113 141-263 17-145 (245)
255 3ldu_A Putative methylase; str 99.1 3.5E-10 1.2E-14 107.0 12.9 118 141-264 183-345 (385)
256 2okc_A Type I restriction enzy 99.1 4.2E-10 1.4E-14 108.8 11.5 106 158-264 171-308 (445)
257 3bt7_A TRNA (uracil-5-)-methyl 99.1 3.2E-10 1.1E-14 106.9 10.0 114 137-264 198-327 (369)
258 3tqs_A Ribosomal RNA small sub 99.0 6.4E-10 2.2E-14 99.1 10.1 83 141-233 17-103 (255)
259 2b9e_A NOL1/NOP2/SUN domain fa 99.0 3.2E-09 1.1E-13 97.3 14.2 106 158-265 102-236 (309)
260 2ih2_A Modification methylase 99.0 6.5E-10 2.2E-14 106.6 10.0 108 141-264 27-165 (421)
261 3axs_A Probable N(2),N(2)-dime 99.0 6E-10 2E-14 105.1 7.6 101 159-263 53-158 (392)
262 3fut_A Dimethyladenosine trans 99.0 1.1E-09 3.6E-14 98.4 8.7 85 141-236 35-120 (271)
263 2dul_A N(2),N(2)-dimethylguano 99.0 2E-09 6.8E-14 101.4 10.1 100 159-263 48-164 (378)
264 2qfm_A Spermine synthase; sper 98.9 7.9E-10 2.7E-14 102.2 6.5 106 158-263 188-314 (364)
265 1m6y_A S-adenosyl-methyltransf 98.9 1.2E-09 4.2E-14 99.6 7.3 88 141-235 14-107 (301)
266 3cvo_A Methyltransferase-like 98.9 4.1E-08 1.4E-12 83.7 15.8 98 159-263 31-154 (202)
267 2efj_A 3,7-dimethylxanthine me 98.9 2.5E-08 8.5E-13 93.4 14.2 160 159-321 53-294 (384)
268 4gqb_A Protein arginine N-meth 98.9 2E-08 6.9E-13 99.7 14.0 100 159-260 358-464 (637)
269 2r6z_A UPF0341 protein in RSP 98.9 3.6E-10 1.2E-14 101.0 0.9 79 159-238 84-173 (258)
270 3v97_A Ribosomal RNA large sub 98.8 1.8E-08 6.2E-13 102.4 12.9 119 140-263 177-347 (703)
271 3uzu_A Ribosomal RNA small sub 98.8 8.7E-09 3E-13 93.0 9.2 72 141-223 30-105 (279)
272 2ar0_A M.ecoki, type I restric 98.8 1.3E-08 4.6E-13 100.3 10.1 107 158-264 169-313 (541)
273 3ftd_A Dimethyladenosine trans 98.8 2.9E-08 9.9E-13 88.1 11.2 89 141-239 19-107 (249)
274 3ll7_A Putative methyltransfer 98.8 3.1E-09 1.1E-13 100.5 4.1 73 159-233 94-170 (410)
275 1m6e_X S-adenosyl-L-methionnin 98.7 2.5E-08 8.4E-13 92.7 8.9 162 158-319 51-280 (359)
276 2qy6_A UPF0209 protein YFCK; s 98.7 1.2E-08 4.1E-13 90.9 6.2 127 158-318 60-234 (257)
277 2oyr_A UPF0341 protein YHIQ; a 98.7 8.2E-09 2.8E-13 91.8 5.0 96 160-257 90-194 (258)
278 3o4f_A Spermidine synthase; am 98.7 9.8E-08 3.4E-12 85.9 10.6 105 159-263 84-198 (294)
279 3evf_A RNA-directed RNA polyme 98.7 6.7E-08 2.3E-12 85.3 9.2 115 141-264 62-185 (277)
280 1qyr_A KSGA, high level kasuga 98.7 1.7E-08 5.9E-13 89.7 5.1 83 141-234 9-98 (252)
281 3ua3_A Protein arginine N-meth 98.7 1.2E-07 4E-12 94.1 11.5 100 159-260 410-531 (745)
282 3khk_A Type I restriction-modi 98.7 6.3E-08 2.2E-12 95.4 9.5 105 160-264 246-396 (544)
283 3lkd_A Type I restriction-modi 98.6 4.4E-07 1.5E-11 89.2 14.1 107 158-264 221-359 (542)
284 2wk1_A NOVP; transferase, O-me 98.5 4.8E-07 1.6E-11 81.3 9.7 103 159-263 107-244 (282)
285 4auk_A Ribosomal RNA large sub 98.3 1.8E-06 6.2E-11 79.8 9.7 93 158-263 211-306 (375)
286 3gcz_A Polyprotein; flavivirus 98.3 2.4E-07 8.1E-12 82.0 3.6 116 141-265 78-203 (282)
287 1wg8_A Predicted S-adenosylmet 98.3 1.1E-06 3.7E-11 78.2 7.6 85 141-236 10-99 (285)
288 3s1s_A Restriction endonucleas 98.3 1.5E-06 5.3E-11 87.5 9.1 106 158-264 321-466 (878)
289 4fzv_A Putative methyltransfer 98.3 1.5E-06 5.3E-11 80.8 7.7 109 158-266 148-287 (359)
290 2k4m_A TR8_protein, UPF0146 pr 98.2 1.2E-06 4.1E-11 69.6 3.8 89 159-268 36-126 (153)
291 3eld_A Methyltransferase; flav 98.1 3.3E-06 1.1E-10 75.1 6.6 104 158-265 81-193 (300)
292 2vz8_A Fatty acid synthase; tr 98.1 4.2E-07 1.4E-11 103.8 0.7 146 158-316 1240-1392(2512)
293 3c6k_A Spermine synthase; sper 98.1 4.4E-06 1.5E-10 77.6 7.1 106 158-263 205-331 (381)
294 3lkz_A Non-structural protein 98.1 1.1E-05 3.8E-10 71.4 8.5 115 141-265 82-206 (321)
295 3ufb_A Type I restriction-modi 98.0 0.00011 3.9E-09 72.0 14.9 118 141-264 205-363 (530)
296 2px2_A Genome polyprotein [con 98.0 1.2E-05 4.3E-10 69.9 6.8 94 158-265 73-185 (269)
297 3p8z_A Mtase, non-structural p 97.9 0.00011 3.7E-09 63.0 11.4 114 141-265 66-188 (267)
298 1rjd_A PPM1P, carboxy methyl t 97.9 0.00026 9E-09 65.2 14.4 150 159-312 98-281 (334)
299 2zig_A TTHA0409, putative modi 97.8 6.9E-05 2.4E-09 68.0 9.9 59 140-205 223-281 (297)
300 3tka_A Ribosomal RNA small sub 97.4 0.00012 4.1E-09 66.6 5.3 87 141-237 45-139 (347)
301 2uyo_A Hypothetical protein ML 97.4 0.0021 7.3E-08 58.4 12.5 149 159-314 103-274 (310)
302 1g60_A Adenine-specific methyl 97.3 0.0007 2.4E-08 60.1 8.2 59 140-205 200-258 (260)
303 1i4w_A Mitochondrial replicati 97.2 0.0011 3.7E-08 61.3 9.1 76 141-220 40-117 (353)
304 3r24_A NSP16, 2'-O-methyl tran 97.2 0.0021 7E-08 57.0 10.1 91 158-264 109-218 (344)
305 3vyw_A MNMC2; tRNA wobble urid 97.2 0.0016 5.4E-08 58.7 9.4 126 159-319 97-248 (308)
306 2dph_A Formaldehyde dismutase; 96.6 0.0093 3.2E-07 56.2 9.9 99 158-264 185-300 (398)
307 1f8f_A Benzyl alcohol dehydrog 96.5 0.012 4.2E-07 54.7 10.2 94 158-264 190-290 (371)
308 1kol_A Formaldehyde dehydrogen 96.5 0.017 5.8E-07 54.3 10.9 99 158-264 185-301 (398)
309 3iei_A Leucine carboxyl methyl 96.2 0.32 1.1E-05 44.4 17.2 151 159-320 91-282 (334)
310 3tos_A CALS11; methyltransfera 96.0 0.1 3.6E-06 45.7 12.7 105 159-265 70-219 (257)
311 3two_A Mannitol dehydrogenase; 95.9 0.03 1E-06 51.5 9.5 90 158-264 176-266 (348)
312 4ej6_A Putative zinc-binding d 95.9 0.041 1.4E-06 51.2 10.3 98 147-264 176-285 (370)
313 1pqw_A Polyketide synthase; ro 95.9 0.026 9E-07 47.3 8.1 90 158-263 38-137 (198)
314 2oo3_A Protein involved in cat 95.9 0.003 1E-07 56.1 2.1 100 159-262 92-197 (283)
315 1e3j_A NADP(H)-dependent ketos 95.8 0.077 2.6E-06 48.9 11.8 94 158-264 168-272 (352)
316 3s2e_A Zinc-containing alcohol 95.8 0.025 8.5E-07 51.9 8.3 92 158-264 166-264 (340)
317 1pl8_A Human sorbitol dehydrog 95.8 0.034 1.2E-06 51.4 9.1 94 158-264 171-274 (356)
318 3m6i_A L-arabinitol 4-dehydrog 95.7 0.071 2.4E-06 49.3 10.9 102 147-264 173-284 (363)
319 3fpc_A NADP-dependent alcohol 95.5 0.039 1.3E-06 50.9 8.4 98 147-264 160-267 (352)
320 3pvc_A TRNA 5-methylaminomethy 95.5 0.041 1.4E-06 55.7 9.2 125 159-317 59-231 (689)
321 3uog_A Alcohol dehydrogenase; 95.4 0.032 1.1E-06 51.8 7.4 94 158-265 189-289 (363)
322 1v3u_A Leukotriene B4 12- hydr 95.3 0.059 2E-06 49.2 9.0 91 158-264 145-245 (333)
323 3ps9_A TRNA 5-methylaminomethy 95.2 0.072 2.5E-06 53.7 9.9 125 159-317 67-239 (676)
324 1uuf_A YAHK, zinc-type alcohol 95.1 0.036 1.2E-06 51.6 7.0 93 158-264 194-289 (369)
325 3goh_A Alcohol dehydrogenase, 95.1 0.035 1.2E-06 50.3 6.6 88 157-263 141-229 (315)
326 3g7u_A Cytosine-specific methy 95.1 0.12 4.2E-06 48.0 10.4 70 160-236 3-81 (376)
327 1rjw_A ADH-HT, alcohol dehydro 95.0 0.13 4.4E-06 47.1 10.2 92 158-264 164-262 (339)
328 1p0f_A NADP-dependent alcohol 95.0 0.13 4.6E-06 47.6 10.5 92 158-264 191-294 (373)
329 1cdo_A Alcohol dehydrogenase; 95.0 0.12 4.2E-06 47.9 10.1 92 158-264 192-295 (374)
330 2fzw_A Alcohol dehydrogenase c 94.9 0.12 4.2E-06 47.9 9.9 92 158-264 190-293 (373)
331 2py6_A Methyltransferase FKBM; 94.9 0.089 3.1E-06 49.6 8.9 63 157-219 225-293 (409)
332 3ip1_A Alcohol dehydrogenase, 94.9 0.22 7.5E-06 46.8 11.6 94 157-264 212-319 (404)
333 2jhf_A Alcohol dehydrogenase E 94.8 0.17 5.8E-06 46.9 10.6 92 158-264 191-294 (374)
334 3gms_A Putative NADPH:quinone 94.8 0.095 3.3E-06 48.0 8.6 91 158-264 144-244 (340)
335 1g55_A DNA cytosine methyltran 94.7 0.023 7.8E-07 52.4 4.3 70 159-235 2-77 (343)
336 1zkd_A DUF185; NESG, RPR58, st 94.7 0.22 7.6E-06 46.4 10.9 52 159-213 81-140 (387)
337 3uko_A Alcohol dehydrogenase c 94.7 0.077 2.6E-06 49.4 8.0 92 158-264 193-296 (378)
338 1e3i_A Alcohol dehydrogenase, 94.7 0.15 5.3E-06 47.3 10.1 92 158-264 195-298 (376)
339 1eg2_A Modification methylase 94.7 0.068 2.3E-06 48.6 7.3 59 140-205 230-291 (319)
340 4b7c_A Probable oxidoreductase 94.7 0.073 2.5E-06 48.6 7.6 92 158-264 149-249 (336)
341 1boo_A Protein (N-4 cytosine-s 94.6 0.048 1.6E-06 49.8 6.1 58 141-205 241-298 (323)
342 3fwz_A Inner membrane protein 94.6 0.85 2.9E-05 35.6 12.8 89 159-262 7-104 (140)
343 1jvb_A NAD(H)-dependent alcoho 94.5 0.13 4.5E-06 47.2 9.0 92 158-264 170-272 (347)
344 2hcy_A Alcohol dehydrogenase 1 94.5 0.08 2.7E-06 48.6 7.5 92 158-264 169-270 (347)
345 2h6e_A ADH-4, D-arabinose 1-de 94.4 0.021 7.2E-07 52.5 3.2 91 159-264 171-270 (344)
346 2d8a_A PH0655, probable L-thre 94.4 0.13 4.3E-06 47.3 8.5 92 158-264 167-268 (348)
347 3jyn_A Quinone oxidoreductase; 94.4 0.13 4.5E-06 46.7 8.6 94 158-265 140-241 (325)
348 2j3h_A NADP-dependent oxidored 94.4 0.13 4.5E-06 47.0 8.6 92 158-264 155-256 (345)
349 4eye_A Probable oxidoreductase 94.3 0.093 3.2E-06 48.1 7.4 92 158-264 159-258 (342)
350 3qwb_A Probable quinone oxidor 94.3 0.097 3.3E-06 47.8 7.4 93 158-264 148-248 (334)
351 2c0c_A Zinc binding alcohol de 94.2 0.21 7.1E-06 46.2 9.7 93 158-264 163-262 (362)
352 3jv7_A ADH-A; dehydrogenase, n 94.1 0.1 3.4E-06 47.9 7.3 93 158-264 171-271 (345)
353 2zig_A TTHA0409, putative modi 94.1 0.069 2.3E-06 48.0 5.9 97 208-321 20-138 (297)
354 2eih_A Alcohol dehydrogenase; 94.1 0.21 7.3E-06 45.6 9.3 91 158-264 166-266 (343)
355 2b5w_A Glucose dehydrogenase; 94.0 0.095 3.2E-06 48.4 6.9 89 160-264 174-274 (357)
356 3fbg_A Putative arginate lyase 94.0 0.22 7.4E-06 45.7 9.3 90 158-262 150-247 (346)
357 4dvj_A Putative zinc-dependent 93.9 0.31 1.1E-05 45.0 10.2 90 158-262 171-269 (363)
358 1yb5_A Quinone oxidoreductase; 93.6 0.24 8E-06 45.6 8.7 90 158-263 170-269 (351)
359 1piw_A Hypothetical zinc-type 93.5 0.033 1.1E-06 51.6 2.6 95 158-264 179-277 (360)
360 1qor_A Quinone oxidoreductase; 93.4 0.21 7.3E-06 45.3 8.0 91 158-264 140-240 (327)
361 1vj0_A Alcohol dehydrogenase, 93.4 0.18 6.3E-06 46.9 7.7 94 158-264 195-299 (380)
362 2cdc_A Glucose dehydrogenase g 93.3 0.25 8.5E-06 45.7 8.4 88 159-264 181-279 (366)
363 4dup_A Quinone oxidoreductase; 93.2 0.21 7.2E-06 45.9 7.7 91 158-264 167-266 (353)
364 3qv2_A 5-cytosine DNA methyltr 93.1 0.25 8.5E-06 45.0 7.9 69 159-235 10-85 (327)
365 3nx4_A Putative oxidoreductase 93.1 0.093 3.2E-06 47.6 5.1 91 161-264 149-242 (324)
366 2j8z_A Quinone oxidoreductase; 93.1 0.26 9E-06 45.3 8.2 91 158-264 162-262 (354)
367 2zb4_A Prostaglandin reductase 92.9 0.37 1.3E-05 44.3 8.9 91 159-264 159-261 (357)
368 4eez_A Alcohol dehydrogenase 1 92.6 0.23 8E-06 45.4 7.1 91 158-263 163-263 (348)
369 3ius_A Uncharacterized conserv 92.6 1.9 6.5E-05 37.7 12.9 93 159-263 5-102 (286)
370 1wly_A CAAR, 2-haloacrylate re 92.5 0.41 1.4E-05 43.5 8.6 91 158-264 145-245 (333)
371 2dq4_A L-threonine 3-dehydroge 92.4 0.095 3.2E-06 48.0 4.2 91 158-264 164-263 (343)
372 2c7p_A Modification methylase 92.4 0.33 1.1E-05 44.2 7.7 66 159-233 11-78 (327)
373 2cf5_A Atccad5, CAD, cinnamyl 92.4 0.16 5.4E-06 46.9 5.6 95 158-264 180-276 (357)
374 3krt_A Crotonyl COA reductase; 92.3 0.6 2E-05 44.5 9.7 94 157-264 227-345 (456)
375 4a2c_A Galactitol-1-phosphate 92.2 1.1 3.9E-05 40.6 11.2 94 158-264 160-261 (346)
376 1xg5_A ARPG836; short chain de 92.1 2.5 8.5E-05 37.0 13.1 78 159-237 32-122 (279)
377 3gaz_A Alcohol dehydrogenase s 92.1 0.38 1.3E-05 44.0 7.7 89 158-263 150-246 (343)
378 4f3n_A Uncharacterized ACR, CO 91.9 0.74 2.5E-05 43.4 9.5 45 159-203 138-188 (432)
379 2zwa_A Leucine carboxyl methyl 91.9 3.4 0.00012 41.6 15.2 158 159-321 108-311 (695)
380 1xa0_A Putative NADPH dependen 91.8 0.29 9.9E-06 44.4 6.7 93 159-264 149-247 (328)
381 1yqd_A Sinapyl alcohol dehydro 91.8 0.18 6.3E-06 46.6 5.4 93 158-264 187-283 (366)
382 3tqh_A Quinone oxidoreductase; 91.6 0.77 2.6E-05 41.4 9.2 96 147-262 146-244 (321)
383 3llv_A Exopolyphosphatase-rela 91.5 0.71 2.4E-05 35.9 7.9 65 159-233 6-77 (141)
384 1boo_A Protein (N-4 cytosine-s 91.5 0.38 1.3E-05 43.7 7.0 56 208-263 13-84 (323)
385 4h0n_A DNMT2; SAH binding, tra 91.1 0.31 1.1E-05 44.5 6.0 69 159-234 3-77 (333)
386 3ioy_A Short-chain dehydrogena 91.0 1.5 5.2E-05 39.4 10.6 78 159-237 8-98 (319)
387 2vhw_A Alanine dehydrogenase; 91.0 0.15 5E-06 47.6 3.7 101 158-263 167-268 (377)
388 2gdz_A NAD+-dependent 15-hydro 90.8 1.7 5.8E-05 37.8 10.5 104 159-263 7-139 (267)
389 3grk_A Enoyl-(acyl-carrier-pro 90.7 2.5 8.6E-05 37.4 11.6 103 159-264 31-170 (293)
390 3oig_A Enoyl-[acyl-carrier-pro 90.7 1.9 6.4E-05 37.4 10.6 105 159-264 7-148 (266)
391 1iz0_A Quinone oxidoreductase; 90.6 0.052 1.8E-06 48.8 0.3 90 158-264 125-219 (302)
392 3pxx_A Carveol dehydrogenase; 90.6 2.9 9.9E-05 36.6 11.9 102 159-263 10-153 (287)
393 4dio_A NAD(P) transhydrogenase 90.6 0.35 1.2E-05 45.3 5.8 98 158-263 189-312 (405)
394 2qrv_A DNA (cytosine-5)-methyl 90.3 0.64 2.2E-05 41.6 7.2 69 158-233 15-90 (295)
395 4dcm_A Ribosomal RNA large sub 90.3 1.4 4.7E-05 40.9 9.7 97 159-263 39-136 (375)
396 1pjc_A Protein (L-alanine dehy 90.3 0.17 5.7E-06 46.9 3.4 101 158-263 166-267 (361)
397 3gqv_A Enoyl reductase; medium 90.2 0.86 2.9E-05 42.1 8.2 93 157-263 163-263 (371)
398 1tt7_A YHFP; alcohol dehydroge 90.1 0.59 2E-05 42.3 7.0 93 159-264 150-248 (330)
399 4a0s_A Octenoyl-COA reductase/ 90.0 0.89 3.1E-05 43.1 8.4 96 157-263 219-336 (447)
400 3ek2_A Enoyl-(acyl-carrier-pro 89.9 1.6 5.4E-05 37.9 9.4 104 158-264 13-154 (271)
401 2eez_A Alanine dehydrogenase; 89.8 0.24 8.2E-06 45.9 4.1 101 158-263 165-266 (369)
402 3ijr_A Oxidoreductase, short c 89.8 3.3 0.00011 36.6 11.6 102 159-263 47-182 (291)
403 3e8x_A Putative NAD-dependent 89.7 2.3 8E-05 36.0 10.2 75 159-242 21-100 (236)
404 3ce6_A Adenosylhomocysteinase; 89.6 1.1 3.8E-05 43.1 8.6 88 158-263 273-361 (494)
405 3p2y_A Alanine dehydrogenase/p 89.6 0.14 4.9E-06 47.5 2.3 97 158-262 183-301 (381)
406 2vn8_A Reticulon-4-interacting 88.8 0.21 7.2E-06 46.3 2.9 92 157-263 182-280 (375)
407 3c85_A Putative glutathione-re 88.7 2.2 7.7E-05 34.6 9.0 91 159-262 39-138 (183)
408 4eso_A Putative oxidoreductase 88.7 2.2 7.6E-05 36.9 9.4 100 159-264 8-139 (255)
409 3r3s_A Oxidoreductase; structu 88.6 3.7 0.00013 36.3 11.0 103 159-264 49-186 (294)
410 3k31_A Enoyl-(acyl-carrier-pro 88.5 1.9 6.6E-05 38.2 9.1 103 159-264 30-169 (296)
411 1wma_A Carbonyl reductase [NAD 88.2 1.4 4.8E-05 38.2 7.8 102 159-263 4-138 (276)
412 3v2g_A 3-oxoacyl-[acyl-carrier 88.1 7.1 0.00024 34.0 12.4 103 159-264 31-166 (271)
413 1lss_A TRK system potassium up 87.8 7.3 0.00025 29.5 11.5 90 159-261 4-100 (140)
414 1l7d_A Nicotinamide nucleotide 87.7 0.3 1E-05 45.5 3.2 42 158-199 171-213 (384)
415 1ja9_A 4HNR, 1,3,6,8-tetrahydr 87.6 2.1 7.3E-05 37.1 8.7 76 159-237 21-110 (274)
416 3t7c_A Carveol dehydrogenase; 87.4 5.6 0.00019 35.2 11.4 75 159-236 28-127 (299)
417 1x13_A NAD(P) transhydrogenase 87.1 0.26 9E-06 46.3 2.4 41 158-198 171-212 (401)
418 3l9w_A Glutathione-regulated p 86.9 2.5 8.7E-05 39.6 9.1 90 159-263 4-102 (413)
419 3sx2_A Putative 3-ketoacyl-(ac 86.8 4.1 0.00014 35.5 10.1 78 159-239 13-115 (278)
420 4fs3_A Enoyl-[acyl-carrier-pro 86.5 3.1 0.00011 36.0 9.0 106 158-264 5-147 (256)
421 3is3_A 17BETA-hydroxysteroid d 86.1 11 0.00037 32.7 12.4 103 159-264 18-153 (270)
422 4fn4_A Short chain dehydrogena 85.9 3.7 0.00013 35.7 9.0 75 159-236 7-94 (254)
423 3ubt_Y Modification methylase 85.8 1.3 4.4E-05 40.1 6.3 66 160-233 1-68 (331)
424 1y1p_A ARII, aldehyde reductas 85.7 11 0.00037 33.5 12.6 79 158-238 10-95 (342)
425 4g81_D Putative hexonate dehyd 85.5 6.4 0.00022 34.2 10.4 77 159-238 9-98 (255)
426 3o26_A Salutaridine reductase; 85.3 6.4 0.00022 34.6 10.7 77 159-237 12-102 (311)
427 3edm_A Short chain dehydrogena 85.3 2.6 8.7E-05 36.6 7.8 102 159-263 8-143 (259)
428 3ew7_A LMO0794 protein; Q8Y8U8 85.2 7.3 0.00025 32.2 10.5 94 160-263 1-102 (221)
429 1zsy_A Mitochondrial 2-enoyl t 84.7 1.7 5.8E-05 39.8 6.6 92 158-263 167-270 (357)
430 3h2s_A Putative NADH-flavin re 84.5 4.3 0.00015 33.8 8.7 95 160-263 1-104 (224)
431 3gvp_A Adenosylhomocysteinase 83.9 5.9 0.0002 37.2 9.8 88 158-263 219-307 (435)
432 3u5t_A 3-oxoacyl-[acyl-carrier 83.8 4.9 0.00017 34.9 9.0 102 159-263 27-161 (267)
433 4fgs_A Probable dehydrogenase 83.4 3.8 0.00013 36.0 8.1 99 159-263 29-159 (273)
434 4e6p_A Probable sorbitol dehyd 83.3 11 0.00038 32.3 11.1 73 159-237 8-93 (259)
435 2g1u_A Hypothetical protein TM 83.2 4.6 0.00016 31.8 7.9 93 158-262 18-117 (155)
436 1gu7_A Enoyl-[acyl-carrier-pro 83.1 0.75 2.6E-05 42.3 3.5 97 158-264 166-276 (364)
437 3pi7_A NADH oxidoreductase; gr 83.0 1.7 5.9E-05 39.6 5.9 89 160-264 166-264 (349)
438 4imr_A 3-oxoacyl-(acyl-carrier 82.9 6 0.00021 34.5 9.3 75 159-236 33-119 (275)
439 1id1_A Putative potassium chan 82.4 8.2 0.00028 30.1 9.1 94 159-262 3-104 (153)
440 3qiv_A Short-chain dehydrogena 82.1 6.9 0.00024 33.4 9.2 75 159-236 9-96 (253)
441 3d4o_A Dipicolinate synthase s 82.1 8.5 0.00029 34.0 10.0 88 158-262 154-243 (293)
442 3n58_A Adenosylhomocysteinase; 82.1 7 0.00024 36.9 9.5 104 138-263 230-334 (464)
443 1xhl_A Short-chain dehydrogena 82.0 12 0.00042 32.9 11.1 77 159-236 26-116 (297)
444 1yb1_A 17-beta-hydroxysteroid 81.8 8.3 0.00029 33.4 9.7 76 159-237 31-119 (272)
445 3nzo_A UDP-N-acetylglucosamine 81.7 4.2 0.00014 37.8 8.1 80 159-239 35-125 (399)
446 3l77_A Short-chain alcohol deh 81.7 14 0.00048 31.0 10.9 77 159-238 2-92 (235)
447 1qsg_A Enoyl-[acyl-carrier-pro 81.7 8.7 0.0003 33.1 9.8 76 159-237 9-98 (265)
448 3awd_A GOX2181, putative polyo 81.5 8.9 0.0003 32.7 9.7 75 159-236 13-100 (260)
449 2a4k_A 3-oxoacyl-[acyl carrier 81.3 14 0.00049 31.8 11.0 100 159-264 6-137 (263)
450 2km1_A Protein DRE2; yeast, an 80.9 1.1 3.8E-05 34.8 3.1 71 190-261 21-96 (136)
451 3ucx_A Short chain dehydrogena 80.8 9.2 0.00032 33.0 9.6 75 159-236 11-98 (264)
452 3lyl_A 3-oxoacyl-(acyl-carrier 80.7 8.1 0.00028 32.8 9.1 76 159-237 5-93 (247)
453 1g60_A Adenine-specific methyl 80.5 2.1 7.3E-05 37.2 5.3 21 243-263 54-74 (260)
454 3ksu_A 3-oxoacyl-acyl carrier 80.3 8.5 0.00029 33.2 9.2 102 159-263 11-147 (262)
455 1g0o_A Trihydroxynaphthalene r 80.1 13 0.00043 32.4 10.4 103 159-264 29-164 (283)
456 3iht_A S-adenosyl-L-methionine 80.1 5 0.00017 31.9 6.6 115 135-263 23-147 (174)
457 3l4b_C TRKA K+ channel protien 80.0 11 0.00036 31.5 9.4 87 161-261 2-97 (218)
458 3tjr_A Short chain dehydrogena 80.0 10 0.00035 33.5 9.8 76 159-237 31-119 (301)
459 3ggo_A Prephenate dehydrogenas 79.8 9.5 0.00032 34.1 9.5 90 159-261 33-126 (314)
460 1fmc_A 7 alpha-hydroxysteroid 79.7 8.7 0.0003 32.6 9.0 75 159-236 11-98 (255)
461 3h7a_A Short chain dehydrogena 79.5 5.8 0.0002 34.1 7.8 76 159-237 7-94 (252)
462 3sju_A Keto reductase; short-c 79.1 9.5 0.00032 33.3 9.2 76 159-237 24-112 (279)
463 3i6i_A Putative leucoanthocyan 79.0 5.7 0.0002 35.8 7.9 87 159-251 10-108 (346)
464 2h7i_A Enoyl-[acyl-carrier-pro 78.2 3 0.0001 36.2 5.6 101 159-264 7-149 (269)
465 3me5_A Cytosine-specific methy 78.2 3.5 0.00012 39.5 6.4 59 158-220 87-146 (482)
466 2pd4_A Enoyl-[acyl-carrier-pro 78.1 6.4 0.00022 34.2 7.7 76 159-237 6-95 (275)
467 2jah_A Clavulanic acid dehydro 78.0 14 0.00048 31.4 9.8 75 159-236 7-94 (247)
468 2p91_A Enoyl-[acyl-carrier-pro 78.0 18 0.00061 31.5 10.7 76 159-237 21-110 (285)
469 2rir_A Dipicolinate synthase, 77.9 6.2 0.00021 35.0 7.6 88 158-262 156-245 (300)
470 3ond_A Adenosylhomocysteinase; 77.5 28 0.00097 33.2 12.3 99 140-262 250-351 (488)
471 2rhc_B Actinorhodin polyketide 77.1 14 0.00048 32.0 9.7 76 159-237 22-110 (277)
472 3nyw_A Putative oxidoreductase 76.9 14 0.00049 31.5 9.5 77 159-236 7-97 (250)
473 3rku_A Oxidoreductase YMR226C; 76.9 13 0.00043 32.7 9.4 78 159-237 33-126 (287)
474 3ojo_A CAP5O; rossmann fold, c 76.7 12 0.00041 35.2 9.4 94 159-261 11-127 (431)
475 1iy8_A Levodione reductase; ox 76.6 15 0.00053 31.5 9.8 78 159-237 13-103 (267)
476 2ae2_A Protein (tropinone redu 76.5 13 0.00045 31.8 9.2 76 159-237 9-98 (260)
477 1ae1_A Tropinone reductase-I; 76.1 16 0.00055 31.6 9.8 76 159-237 21-110 (273)
478 3gvc_A Oxidoreductase, probabl 75.9 23 0.0008 30.7 10.8 74 159-238 29-115 (277)
479 1h2b_A Alcohol dehydrogenase; 75.6 6.6 0.00023 35.8 7.4 91 158-264 186-286 (359)
480 3h9u_A Adenosylhomocysteinase; 75.6 14 0.00047 34.8 9.4 87 158-262 210-297 (436)
481 1zem_A Xylitol dehydrogenase; 75.6 15 0.00051 31.5 9.4 75 159-236 7-94 (262)
482 4f6c_A AUSA reductase domain p 75.6 21 0.00071 33.1 11.0 79 158-237 68-161 (427)
483 2x9g_A PTR1, pteridine reducta 75.5 20 0.00068 31.2 10.3 75 159-236 23-116 (288)
484 3cxt_A Dehydrogenase with diff 75.3 15 0.00051 32.2 9.4 76 159-237 34-122 (291)
485 3o38_A Short chain dehydrogena 75.2 13 0.00044 31.9 8.9 77 159-237 22-112 (266)
486 3ic5_A Putative saccharopine d 75.2 10 0.00035 27.5 7.2 66 159-234 5-77 (118)
487 3v8b_A Putative dehydrogenase, 75.0 13 0.00045 32.5 8.9 75 159-236 28-115 (283)
488 3nrc_A Enoyl-[acyl-carrier-pro 74.7 20 0.00068 31.1 10.0 76 159-238 26-115 (280)
489 4hp8_A 2-deoxy-D-gluconate 3-d 74.6 37 0.0013 29.1 11.4 75 159-238 9-91 (247)
490 3ai3_A NADPH-sorbose reductase 74.6 17 0.00059 31.0 9.5 76 159-237 7-96 (263)
491 3ruf_A WBGU; rossmann fold, UD 74.5 6.3 0.00022 35.4 6.9 78 159-237 25-111 (351)
492 3f9i_A 3-oxoacyl-[acyl-carrier 74.5 31 0.0011 29.0 11.1 74 158-237 13-95 (249)
493 1geg_A Acetoin reductase; SDR 74.3 19 0.00064 30.7 9.7 74 160-236 3-89 (256)
494 3svt_A Short-chain type dehydr 74.3 15 0.00052 31.9 9.1 77 159-236 11-101 (281)
495 3lf2_A Short chain oxidoreduct 74.3 19 0.00064 30.9 9.7 78 159-237 8-98 (265)
496 3r1i_A Short-chain type dehydr 74.2 11 0.00036 32.9 8.0 77 159-238 32-121 (276)
497 1yxm_A Pecra, peroxisomal tran 73.6 19 0.00066 31.4 9.8 77 159-236 18-110 (303)
498 3pgx_A Carveol dehydrogenase; 73.2 18 0.00063 31.3 9.4 77 159-238 15-117 (280)
499 1w6u_A 2,4-dienoyl-COA reducta 73.2 18 0.0006 31.7 9.4 75 159-236 26-114 (302)
500 1xu9_A Corticosteroid 11-beta- 73.0 13 0.00046 32.3 8.5 73 159-233 28-113 (286)
No 1
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.96 E-value=5.6e-28 Score=219.56 Aligned_cols=222 Identities=30% Similarity=0.500 Sum_probs=166.9
Q ss_pred HHHHHHhcccchhhHhhhcccccccccCCCCCcCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHH
Q 017428 97 EGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYL 176 (371)
Q Consensus 97 ~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l 176 (371)
+.+..+||..++.|+.+++..++.+||...... ......+.++.+.+++.+.+.+ +.+|||||||+|.++..+
T Consensus 7 ~~~~~~Yd~~~~~y~~~~~~~~~~~y~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l 79 (273)
T 3bus_A 7 EEVRQMYDDFTDPFARIWGENLHFGYWEDAGAD--VSVDDATDRLTDEMIALLDVRS-----GDRVLDVGCGIGKPAVRL 79 (273)
T ss_dssp ----------------CCGGGCCCCCCCCSSCC--CCHHHHHHHHHHHHHHHSCCCT-----TCEEEEESCTTSHHHHHH
T ss_pred HHHHHHHcchHHHHHHHcCCCceEEecCCCccc--cCHHHHHHHHHHHHHHhcCCCC-----CCEEEEeCCCCCHHHHHH
Confidence 348889999999999999999999999765431 2366777888888998887665 889999999999999999
Q ss_pred HHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCC
Q 017428 177 AKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPA 256 (371)
Q Consensus 177 ~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg 256 (371)
++.++.+|+|+|+|+.+++.+++++...++++++.+..+|+.++++++++||+|++..+++|++++..+++++.++||||
T Consensus 80 ~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 159 (273)
T 3bus_A 80 ATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPG 159 (273)
T ss_dssp HHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE
T ss_pred HHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC
Confidence 98778899999999999999999999988888899999999999888899999999999999999999999999999999
Q ss_pred cEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecCCcccCccHHHH
Q 017428 257 GTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVAPFWPAVI 331 (371)
Q Consensus 257 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~ 331 (371)
|++++.++...... .......+......+....+.+.+++.++|+++||+++++........+++....
T Consensus 160 G~l~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~ 228 (273)
T 3bus_A 160 GTVAIADFVLLAPV------EGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDISAQARPSLVKTA 228 (273)
T ss_dssp EEEEEEEEEESSCC------CHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEECHHHHTTHHHHHH
T ss_pred eEEEEEEeeccCCC------ChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEECcHhHHHHHHHHH
Confidence 99999987543211 1111122222222222334679999999999999999999888776655554443
No 2
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.96 E-value=2.7e-28 Score=224.52 Aligned_cols=224 Identities=27% Similarity=0.470 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHhccc--chhhHhhhc-ccccccccCCCCCcCcchHHHHHHHHHHHHHHHc----CCCCCCCCCCCEEEE
Q 017428 92 ARELKEGIAEFYDES--SSLWEDIWG-DHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFA----GVSEDPTKRPKNVVD 164 (371)
Q Consensus 92 ~~~~~~~i~~~yd~~--~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~VLD 164 (371)
.....+.+.+|||.. .++|+.+|+ .+++.+||..... .......+.+.+..++..+ .+.+ +.+|||
T Consensus 16 ~~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~-----~~~vLD 88 (297)
T 2o57_A 16 SKTVKDNAEIYYDDDDSDRFYFHVWGGEDIHVGLYKEPVD--QDEIREASLRTDEWLASELAMTGVLQR-----QAKGLD 88 (297)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCSCCCCSSGG--GSCHHHHHHHHHHHHHHHHHHTTCCCT-----TCEEEE
T ss_pred HHHHHHHHHHHcCCccchhHHHHHhCCCceEEEecCCCCC--CcchHHHHHHHHHHHHHHhhhccCCCC-----CCEEEE
Confidence 355667899999987 488988885 6788899976510 1126677777888888877 5554 889999
Q ss_pred ECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcCCHHH
Q 017428 165 VGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSK 244 (371)
Q Consensus 165 lG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 244 (371)
||||+|.++..+++.++.+|+|+|+|+.+++.|++++...++++++.+.++|+.++++++++||+|++..+++|++++..
T Consensus 89 iGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 168 (297)
T 2o57_A 89 LGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK 168 (297)
T ss_dssp ETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH
T ss_pred eCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHH
Confidence 99999999999999878899999999999999999999888888999999999999988899999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecCCccc
Q 017428 245 FVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVA 324 (371)
Q Consensus 245 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~ 324 (371)
++++++++|||||++++.++........ .. ...++ ..+..+.+.+.+++.++|+++||+++++..+...+.
T Consensus 169 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~----~~~~~----~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 239 (297)
T 2o57_A 169 VFQECARVLKPRGVMAITDPMKEDGIDK-SS----IQPIL----DRIKLHDMGSLGLYRSLAKECGLVTLRTFSRPDSLV 239 (297)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEECTTCCG-GG----GHHHH----HHHTCSSCCCHHHHHHHHHHTTEEEEEEEECHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEEeccCCCCch-HH----HHHHH----HHhcCCCCCCHHHHHHHHHHCCCeEEEEEECchhhH
Confidence 9999999999999999998764432211 11 11222 222334467999999999999999999988776655
Q ss_pred CccHHHH
Q 017428 325 PFWPAVI 331 (371)
Q Consensus 325 ~~~~~~~ 331 (371)
++|....
T Consensus 240 ~~~~~~~ 246 (297)
T 2o57_A 240 HHYSKVK 246 (297)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 3
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.95 E-value=1.2e-26 Score=212.33 Aligned_cols=216 Identities=18% Similarity=0.180 Sum_probs=165.7
Q ss_pred HHHHHHHhcccchhhHhhhccccc--ccccCCCCCcCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHH
Q 017428 96 KEGIAEFYDESSSLWEDIWGDHMH--HGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSS 173 (371)
Q Consensus 96 ~~~i~~~yd~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~ 173 (371)
.+++..+||..+++|..+++..++ .++|..+.. .....+.+.+..++..+.+.+ +.+|||||||+|.++
T Consensus 9 ~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~----~l~~a~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G~~~ 79 (287)
T 1kpg_A 9 FANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDM----TLQEAQIAKIDLALGKLGLQP-----GMTLLDVGCGWGATM 79 (287)
T ss_dssp HHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHTTTTCCT-----TCEEEEETCTTSHHH
T ss_pred HHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCC----CHHHHHHHHHHHHHHHcCCCC-----cCEEEEECCcccHHH
Confidence 456999999999999998887644 577765432 267777888888888777654 889999999999999
Q ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCc--CCHHHHHHHHHH
Q 017428 174 RYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHM--PDKSKFVSELAR 251 (371)
Q Consensus 174 ~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~ 251 (371)
..+++.++.+|+|+|+|+.+++.|++++...++.+++.+..+|+.+++ ++||+|++..+++|+ .++..+++++.+
T Consensus 80 ~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~ 156 (287)
T 1kpg_A 80 MRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHR 156 (287)
T ss_dssp HHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHH
Confidence 999977788999999999999999999998888789999999998765 889999999999999 678999999999
Q ss_pred hcCCCcEEEEEeccCCCCCcC---ccccChHHHHHHHHHhh-ccCCCCCCCHHHHHHHHHhCCCceEEEEecCCcc
Q 017428 252 VTAPAGTIIIVTWCHRDLAPS---EESLQPWEQELLKKICD-AYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 252 ~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~ 323 (371)
+|||||.+++.++........ ..............+.. .+....+.+.+++.++++++||+++++..+..++
T Consensus 157 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y 232 (287)
T 1kpg_A 157 LLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQPHY 232 (287)
T ss_dssp HSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECHHHH
T ss_pred hcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeCcHhH
Confidence 999999999988764331110 00000000011111111 1111134689999999999999999998765543
No 4
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.95 E-value=6.5e-27 Score=215.91 Aligned_cols=261 Identities=15% Similarity=0.150 Sum_probs=188.5
Q ss_pred HHHHHHHHHHhcccchhhHhhhccccc--ccccCCCCCcCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcC
Q 017428 93 RELKEGIAEFYDESSSLWEDIWGDHMH--HGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIG 170 (371)
Q Consensus 93 ~~~~~~i~~~yd~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG 170 (371)
...++++..+||..+++|..++++.+. .++|..+.. .....+.+.+..++..+.+++ +.+|||||||+|
T Consensus 14 ~~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~----~l~~a~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G 84 (302)
T 3hem_A 14 KPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDM----TLEEAQYAKRKLALDKLNLEP-----GMTLLDIGCGWG 84 (302)
T ss_dssp CCCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHHTTCCCT-----TCEEEEETCTTS
T ss_pred cchHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCC----CHHHHHHHHHHHHHHHcCCCC-----cCEEEEeeccCc
Confidence 345678999999999999999987654 467765432 267788888899999887665 889999999999
Q ss_pred hHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcCCH--------
Q 017428 171 GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK-------- 242 (371)
Q Consensus 171 ~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-------- 242 (371)
.++..+++.++.+|+|+|+|+.+++.|++++...++++++.+..+|+.++ +++||+|++..+++|++++
T Consensus 85 ~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~ 161 (302)
T 3hem_A 85 STMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFER 161 (302)
T ss_dssp HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTH
T ss_pred HHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhH
Confidence 99999999878899999999999999999999999888999999999876 6899999999999999654
Q ss_pred -HHHHHHHHHhcCCCcEEEEEeccCCCCCcCcccc---ChHH---HHHHHH-HhhccCCCCCCCHHHHHHHHHhCCCceE
Q 017428 243 -SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESL---QPWE---QELLKK-ICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (371)
Q Consensus 243 -~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~---~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~ll~~aGF~~v 314 (371)
..+++++.++|||||.+++.++............ .... ..++.. ..... .+.+.+++.++++++||+++
T Consensus 162 ~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~s~~~~~~~l~~aGf~~~ 238 (302)
T 3hem_A 162 YDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG---RLPRISQVDYYSSNAGWKVE 238 (302)
T ss_dssp HHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC---CCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC---CCCCHHHHHHHHHhCCcEEE
Confidence 7999999999999999999987654321000000 0000 011111 11111 24689999999999999999
Q ss_pred EEEecCCcccCccHHHHHhh-hcHHHHHHHHHhhcccchhHhHHHHHHHHcccccC
Q 017428 315 KAEDWSQNVAPFWPAVIHSA-LTWKGFTSLLRTEIFTGRKVLLCNHIEEDFPNALS 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 369 (371)
+++.+..++........+.. ..+..+..+....+- -.....+..+..+|+.|.+
T Consensus 239 ~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~~~~~~~-~~w~~yl~~~~~~f~~~~~ 293 (302)
T 3hem_A 239 RYHRIGANYVPTLNAWADALQAHKDEAIALKGQETC-DIYMHYLRGCSDLFRDKYT 293 (302)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTHHHHHHHHCHHHH-HHHHHHHHHHHHHHHTTSS
T ss_pred EEEeCchhHHHHHHHHHHHHHHhHHHHHHHhCHHHH-HHHHHHHHHHHHHHhCCCC
Confidence 99887776543222221111 112222222222221 1245567777788888865
No 5
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.93 E-value=3.2e-25 Score=206.02 Aligned_cols=218 Identities=17% Similarity=0.179 Sum_probs=162.4
Q ss_pred HHHHHHHHHHhcccchhhHhhhccccc--ccccCCCCCcCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcC
Q 017428 93 RELKEGIAEFYDESSSLWEDIWGDHMH--HGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIG 170 (371)
Q Consensus 93 ~~~~~~i~~~yd~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG 170 (371)
....+++..+||..+++|..+++..+. .++|..+.. .....+...+..++..+.+.+ +.+|||||||+|
T Consensus 32 ~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G 102 (318)
T 2fk8_A 32 RTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPEL----TLEEAQYAKVDLNLDKLDLKP-----GMTLLDIGCGWG 102 (318)
T ss_dssp ------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHTTSCCCT-----TCEEEEESCTTS
T ss_pred hhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCC----CHHHHHHHHHHHHHHhcCCCC-----cCEEEEEcccch
Confidence 455667899999999999988887544 467764332 266777788888888777654 889999999999
Q ss_pred hHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCc--CCHHHHHHH
Q 017428 171 GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHM--PDKSKFVSE 248 (371)
Q Consensus 171 ~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~ 248 (371)
.++..+++.++++|+|+|+|+.+++.|++++...++.+++.+..+|+.+++ ++||+|++..+++|+ +++..++++
T Consensus 103 ~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~ 179 (318)
T 2fk8_A 103 TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKR 179 (318)
T ss_dssp HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHH
Confidence 999999988788999999999999999999998888778999999998764 789999999999999 678999999
Q ss_pred HHHhcCCCcEEEEEeccCCCCCcCccccCh---HHHHHHHHHhhc-cCCCCCCCHHHHHHHHHhCCCceEEEEecCCc
Q 017428 249 LARVTAPAGTIIIVTWCHRDLAPSEESLQP---WEQELLKKICDA-YYLPAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (371)
Q Consensus 249 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~ 322 (371)
+.++|||||.+++.++.............. ........+... +....+.+.+++.++|+++||+++++..+...
T Consensus 180 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~ 257 (318)
T 2fk8_A 180 CFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLRPH 257 (318)
T ss_dssp HHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEECHHH
T ss_pred HHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEecchh
Confidence 999999999999998765432100000000 000000111111 11113468999999999999999988776544
No 6
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.91 E-value=3e-23 Score=192.21 Aligned_cols=176 Identities=25% Similarity=0.423 Sum_probs=141.1
Q ss_pred HHHHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 140 RMIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 140 ~~~~~~l~~~~-~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
...+.+++.+. +. ++.+|||||||+|.++..+++.++.+|+|+|+|+.+++.|++++...++.+++.++.+|+.
T Consensus 103 ~~~~~l~~~l~~~~-----~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 103 AQAEFLMDHLGQAG-----PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML 177 (312)
T ss_dssp HHHHHHHTTSCCCC-----TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHhccCC-----CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 33444555555 43 4889999999999999999998788999999999999999999999998889999999999
Q ss_pred CCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCC
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
++++++++||+|++..+++|+ ++..+++++.++|||||++++.++...... .....+... +.. .+ .+.+++
T Consensus 178 ~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~-~~~---~~-~~~~~s 248 (312)
T 3vc1_A 178 DTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRY---GQPSKWVSQ-INA---HF-ECNIHS 248 (312)
T ss_dssp SCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTT---CSCCHHHHH-HHH---HH-TCCCCB
T ss_pred cCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccc---cchhHHHHH-HHh---hh-cCCCCC
Confidence 998888999999999999999 699999999999999999999987655432 112222211 111 11 224679
Q ss_pred HHHHHHHHHhCCCceEEEEecCCcccCccHH
Q 017428 299 TADYVKLLQSLSLEDIKAEDWSQNVAPFWPA 329 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~ 329 (371)
.+++.++|+++||++++++.+.....++|..
T Consensus 249 ~~~~~~~l~~aGf~~~~~~~~~~~~~~~w~~ 279 (312)
T 3vc1_A 249 RREYLRAMADNRLVPHTIVDLTPDTLPYWEL 279 (312)
T ss_dssp HHHHHHHHHTTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEeCCHHHHHHHHH
Confidence 9999999999999999999887554444443
No 7
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.89 E-value=2.2e-22 Score=180.77 Aligned_cols=164 Identities=18% Similarity=0.205 Sum_probs=132.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.+..++..+.+.+ +.+|||||||+|.++..+++.++.+|+|+|+|+.+++.|+++++..++.+++.+.++|+.++
T Consensus 24 ~~~~l~~~~~~~~-----~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 24 KYATLGRVLRMKP-----GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHTCCCT-----TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred HHHHHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 4556666666554 88999999999999999999877899999999999999999999988877999999999998
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
++ +++||+|++..+++|++++..++++++++|||||++++.+........ . .. +...........+.+.+
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-----~---~~-~~~~~~~~~~~~~~~~~ 168 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPA-----T---EE-IAQACGVSSTSDFLTLP 168 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCS-----S---HH-HHHTTTCSCGGGSCCHH
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCC-----h---HH-HHHHHhcccccccCCHH
Confidence 77 789999999999999999999999999999999999998754332211 0 01 11111111122467999
Q ss_pred HHHHHHHhCCCceEEEEec
Q 017428 301 DYVKLLQSLSLEDIKAEDW 319 (371)
Q Consensus 301 ~~~~ll~~aGF~~v~~~~~ 319 (371)
++.++|+++||+++++...
T Consensus 169 ~~~~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 169 GLVGAFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHHHHHTTTBCCCEEEEC
T ss_pred HHHHHHHHCCCeeEEEEeC
Confidence 9999999999999887643
No 8
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.89 E-value=3e-22 Score=180.50 Aligned_cols=169 Identities=22% Similarity=0.326 Sum_probs=132.6
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 017428 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (371)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (371)
+..++..+...+ +.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++++...+++ ++.+.++|+.+++
T Consensus 26 ~~~l~~~l~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 26 LAKLMQIAALKG-----NEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMP 98 (260)
T ss_dssp HHHHHHHHTCCS-----CCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCC
T ss_pred HHHHHHHhCCCC-----CCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCC
Confidence 455556565554 889999999999999999887 469999999999999999999888874 7999999999999
Q ss_pred CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHH
Q 017428 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (371)
+++++||+|++..+++|++++..++++++++|||||++++.++..+.. .....+. ........... ...++.++
T Consensus 99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~-~~~~~~~~ 172 (260)
T 1vl5_A 99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN----DAFDVFY-NYVEKERDYSH-HRAWKKSD 172 (260)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS----HHHHHHH-HHHHHHHCTTC-CCCCBHHH
T ss_pred CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC----HHHHHHH-HHHHHhcCccc-cCCCCHHH
Confidence 888999999999999999999999999999999999999987654321 1111111 11111111112 23578999
Q ss_pred HHHHHHhCCCceEEEEecCCcc
Q 017428 302 YVKLLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 302 ~~~ll~~aGF~~v~~~~~~~~~ 323 (371)
+.++|+++||+++.+..+..++
T Consensus 173 ~~~~l~~aGf~~~~~~~~~~~~ 194 (260)
T 1vl5_A 173 WLKMLEEAGFELEELHCFHKTF 194 (260)
T ss_dssp HHHHHHHHTCEEEEEEEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEeeccC
Confidence 9999999999998887765543
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.89 E-value=1.2e-22 Score=183.20 Aligned_cols=167 Identities=24% Similarity=0.475 Sum_probs=133.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
....++..+.+.+ +.+|||||||+|.++..+++.++.+|+|+|+|+.+++.|+++.... ++++++++|+.++
T Consensus 43 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 43 ATKKILSDIELNE-----NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK 114 (266)
T ss_dssp HHHHHTTTCCCCT-----TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC
T ss_pred HHHHHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC
Confidence 4556666665544 8899999999999999999987889999999999999999876443 5899999999999
Q ss_pred CCCCCccceEEccccccCc--CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCC
Q 017428 221 PFPDGQFDLVWSMESGEHM--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
++++++||+|++..+++|+ .++..+++++.++|||||.+++.++..... ..+......... ..+. .+++
T Consensus 115 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~----~~~~~~~~~~~~----~~~~-~~~~ 185 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEK----ENWDDEFKEYVK----QRKY-TLIT 185 (266)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCG----GGCCHHHHHHHH----HHTC-CCCC
T ss_pred CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCc----ccchHHHHHHHh----cCCC-CCCC
Confidence 8888999999999999999 788999999999999999999998754431 122222222221 1122 2568
Q ss_pred HHHHHHHHHhCCCceEEEEecCCccc
Q 017428 299 TADYVKLLQSLSLEDIKAEDWSQNVA 324 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~~~~~~~ 324 (371)
.+++.++|+++||+++++..+..++.
T Consensus 186 ~~~~~~~l~~~Gf~~~~~~~~~~~~~ 211 (266)
T 3ujc_A 186 VEEYADILTACNFKNVVSKDLSDYWN 211 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEEECHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEeCCHHHH
Confidence 99999999999999999887766543
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.89 E-value=3.1e-22 Score=180.28 Aligned_cols=153 Identities=14% Similarity=0.136 Sum_probs=118.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 234 (371)
++.+|||||||+|..+..+++.+ +++|+|+|+|+.|++.|+++++..+...+++++++|+.++++ +.||+|++..
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccceeee
Confidence 48999999999999999999875 579999999999999999999988887899999999999875 4699999999
Q ss_pred cccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccC---------------CCCCC
Q 017428 235 SGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY---------------LPAWC 297 (371)
Q Consensus 235 ~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 297 (371)
+++|+++. ..++++++++|||||+|++.+....... .................+ .....
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~----~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDA----KVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSH----HHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 99999654 5789999999999999999986543221 111111111111100000 01135
Q ss_pred CHHHHHHHHHhCCCceEEE
Q 017428 298 STADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 298 ~~~~~~~ll~~aGF~~v~~ 316 (371)
+.+++.++|+++||+.|++
T Consensus 224 s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHcCCCeEEE
Confidence 8899999999999998876
No 11
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.88 E-value=2.3e-21 Score=174.23 Aligned_cols=154 Identities=19% Similarity=0.267 Sum_probs=127.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++...++++++.++++|+.++++++++||+|++..+++
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 47899999999999999999987669999999999999999999999998889999999999988889999999999999
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
|+ ++..+++++.++|||||++++.+........ .......+.. . .+.+.+.+++.++|+++||+++++.
T Consensus 126 ~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----~~~~~~~~~~---~--~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 126 NI-GFERGMNEWSKYLKKGGFIAVSEASWFTSER-----PAEIEDFWMD---A--YPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp CC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCC-----CHHHHHHHHH---H--CTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCC-----hHHHHHHHHH---h--CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 99 8999999999999999999999854222111 1111121211 1 1235689999999999999999987
Q ss_pred ecCCc
Q 017428 318 DWSQN 322 (371)
Q Consensus 318 ~~~~~ 322 (371)
.+...
T Consensus 195 ~~~~~ 199 (257)
T 3f4k_A 195 ILPEN 199 (257)
T ss_dssp ECCGG
T ss_pred ECChh
Confidence 65543
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.88 E-value=1.9e-21 Score=173.06 Aligned_cols=170 Identities=22% Similarity=0.391 Sum_probs=134.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
....++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+++ ++.+.++|+.++
T Consensus 9 ~~~~~~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 81 (239)
T 1xxl_A 9 SLGLMIKTAECRA-----EHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL 81 (239)
T ss_dssp HHHHHHHHHTCCT-----TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC
T ss_pred CcchHHHHhCcCC-----CCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC
Confidence 3445566666654 899999999999999999887 569999999999999999999888774 799999999999
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
++++++||+|++..+++|++++..++++++++|||||++++.+...+.. .....+. ..+.......+. ..++.+
T Consensus 82 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~-~~~~~~ 155 (239)
T 1xxl_A 82 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED----PVLDEFV-NHLNRLRDPSHV-RESSLS 155 (239)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS----HHHHHHH-HHHHHHHCTTCC-CCCBHH
T ss_pred CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC----hhHHHHH-HHHHHhcccccc-CCCCHH
Confidence 8888999999999999999999999999999999999999988654321 1111111 111111122222 357899
Q ss_pred HHHHHHHhCCCceEEEEecCCcc
Q 017428 301 DYVKLLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 301 ~~~~ll~~aGF~~v~~~~~~~~~ 323 (371)
++.++|+++||+++.+..+..++
T Consensus 156 ~~~~ll~~aGf~~~~~~~~~~~~ 178 (239)
T 1xxl_A 156 EWQAMFSANQLAYQDIQKWNLPI 178 (239)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred HHHHHHHHCCCcEEEEEeecCcc
Confidence 99999999999999888775443
No 13
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.88 E-value=5.8e-22 Score=180.11 Aligned_cols=168 Identities=24% Similarity=0.331 Sum_probs=131.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.+++++...+++ ++.+...|+.++++++++||+|++..++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCCCCCeeEEEEechh
Confidence 48899999999999999999987 689999999999999999999988874 7999999999988888999999999999
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCC--cCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceE
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLA--PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 314 (371)
+|++++..+++++.++|||||++++.+....... +.......+...+.. .....+. ..++..++.++|+++||+++
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~l~~aGf~~v 193 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR-VQAYMKG-NSLVGRQIYPLLQESGFEKI 193 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH-HHHHTTC-CTTGGGGHHHHHHHTTCEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH-HHHhcCC-CcchHHHHHHHHHHCCCCeE
Confidence 9999999999999999999999999886432211 111111111111111 1111111 24577899999999999999
Q ss_pred EEEecCCcccCccH
Q 017428 315 KAEDWSQNVAPFWP 328 (371)
Q Consensus 315 ~~~~~~~~~~~~~~ 328 (371)
+++....+...+.+
T Consensus 194 ~~~~~~~~~~~~~~ 207 (276)
T 3mgg_A 194 RVEPRMVYIDSSKP 207 (276)
T ss_dssp EEEEEEEEECTTCH
T ss_pred EEeeEEEECCCCCh
Confidence 99887766655433
No 14
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.88 E-value=9.6e-22 Score=177.91 Aligned_cols=153 Identities=19% Similarity=0.270 Sum_probs=127.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|+++++..+++++++++++|+.++++++++||+|++..+++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCce
Confidence 48999999999999999999975569999999999999999999999998889999999999888889999999999999
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
|+ ++..+++++.++|||||++++.+........ .......+. ..+ +.+.+.+++.++|+++||+++++.
T Consensus 126 ~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----~~~~~~~~~---~~~--~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 126 NI-GFERGLNEWRKYLKKGGYLAVSECSWFTDER-----PAEINDFWM---DAY--PEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp GT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCC-----CHHHHHHHH---HHC--TTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred ec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCC-----hHHHHHHHH---HhC--CCCCCHHHHHHHHHHCCCEEEEEE
Confidence 99 8999999999999999999999865322111 111112221 111 246689999999999999999988
Q ss_pred ecCC
Q 017428 318 DWSQ 321 (371)
Q Consensus 318 ~~~~ 321 (371)
.+..
T Consensus 195 ~~~~ 198 (267)
T 3kkz_A 195 ILPE 198 (267)
T ss_dssp ECCG
T ss_pred ECCH
Confidence 7654
No 15
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.88 E-value=1.7e-22 Score=179.10 Aligned_cols=170 Identities=18% Similarity=0.222 Sum_probs=127.6
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (371)
..++..+... .++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+ ++.++.+|+.+.+
T Consensus 33 ~~~~~~~~~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~ 105 (234)
T 3dtn_A 33 GVSVSIASVD----TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYD 105 (234)
T ss_dssp HHHHHTCCCS----CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCC
T ss_pred HHHHHHhhcC----CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccC
Confidence 4445554422 247899999999999999999987 7899999999999999999875443 7999999999988
Q ss_pred CCCCccceEEccccccCcCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHh-----------
Q 017428 222 FPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC----------- 288 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 288 (371)
++ ++||+|++..+++|+++.. .++++++++|||||++++.+........ ........+....
T Consensus 106 ~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 180 (234)
T 3dtn_A 106 FE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAF----IENLNKTIWRQYVENSGLTEEEIA 180 (234)
T ss_dssp CC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHH----HHHHHHHHHHHHHHTSSCCHHHHH
T ss_pred CC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChh----hhhHHHHHHHHHHHhcCCCHHHHH
Confidence 76 8999999999999998765 5999999999999999999876543211 1111111111110
Q ss_pred ---hccCCCCCCCHHHHHHHHHhCCCceEEEEecCCccc
Q 017428 289 ---DAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVA 324 (371)
Q Consensus 289 ---~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~ 324 (371)
........++.+++.++|+++||+++++.....++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~ 219 (234)
T 3dtn_A 181 AGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFA 219 (234)
T ss_dssp TTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEE
T ss_pred HHHHhcccccccCHHHHHHHHHHcCCCceeeeeeeccee
Confidence 011122357899999999999999998876555543
No 16
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.88 E-value=1.1e-21 Score=179.25 Aligned_cols=176 Identities=16% Similarity=0.153 Sum_probs=133.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
+.+..++..+.. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++++++.++++|+.+
T Consensus 56 ~~l~~~l~~~~~------~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 128 (285)
T 4htf_A 56 QDLDRVLAEMGP------QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQD 128 (285)
T ss_dssp HHHHHHHHHTCS------SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGG
T ss_pred HHHHHHHHhcCC------CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHH
Confidence 345566666543 2679999999999999999987 889999999999999999999988887789999999998
Q ss_pred CC-CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHh----hccCCC
Q 017428 220 QP-FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC----DAYYLP 294 (371)
Q Consensus 220 ~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 294 (371)
++ +++++||+|++..+++|++++..+++++.++|||||++++..+..............+ ........ ......
T Consensus 129 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 207 (285)
T 4htf_A 129 VASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNF-DYVQAGMPKKKKRTLSPD 207 (285)
T ss_dssp TGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCH-HHHHTTCCCC----CCCS
T ss_pred hhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCH-HHHhhhccccccccCCCC
Confidence 86 7789999999999999999999999999999999999999885432110000000000 00000000 001112
Q ss_pred CCCCHHHHHHHHHhCCCceEEEEecCCcc
Q 017428 295 AWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 295 ~~~~~~~~~~ll~~aGF~~v~~~~~~~~~ 323 (371)
.+++.+++.++|+++||+++++.......
T Consensus 208 ~~~~~~~l~~~l~~aGf~v~~~~~~~~~~ 236 (285)
T 4htf_A 208 YPRDPTQVYLWLEEAGWQIMGKTGVRVFH 236 (285)
T ss_dssp CCBCHHHHHHHHHHTTCEEEEEEEESSSG
T ss_pred CCCCHHHHHHHHHHCCCceeeeeeEEEee
Confidence 35789999999999999999998776554
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.88 E-value=3.5e-21 Score=168.80 Aligned_cols=156 Identities=22% Similarity=0.286 Sum_probs=131.5
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
..++..+.+.+ +.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+++ ++.+..+|+.++
T Consensus 27 ~~~~~~~~~~~-----~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~ 100 (219)
T 3dh0_A 27 EKVLKEFGLKE-----GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKI 100 (219)
T ss_dssp HHHHHHHTCCT-----TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBC
T ss_pred HHHHHHhCCCC-----CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccC
Confidence 44555555554 7899999999999999999986 479999999999999999999888875 899999999998
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
++++++||+|++..+++|++++..+++++.++|||||.+++.++......... .....++.+
T Consensus 101 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------------------~~~~~~~~~ 162 (219)
T 3dh0_A 101 PLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP------------------PPEEVYSEW 162 (219)
T ss_dssp SSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC------------------CGGGSCCHH
T ss_pred CCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCC------------------chhcccCHH
Confidence 88889999999999999999999999999999999999999987654431110 011246899
Q ss_pred HHHHHHHhCCCceEEEEecCCc
Q 017428 301 DYVKLLQSLSLEDIKAEDWSQN 322 (371)
Q Consensus 301 ~~~~ll~~aGF~~v~~~~~~~~ 322 (371)
++.++|+++||+++++..+...
T Consensus 163 ~~~~~l~~~Gf~~~~~~~~~~~ 184 (219)
T 3dh0_A 163 EVGLILEDAGIRVGRVVEVGKY 184 (219)
T ss_dssp HHHHHHHHTTCEEEEEEEETTT
T ss_pred HHHHHHHHCCCEEEEEEeeCCc
Confidence 9999999999999998776543
No 18
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.88 E-value=3.8e-21 Score=175.63 Aligned_cols=164 Identities=19% Similarity=0.175 Sum_probs=125.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 235 (371)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+ .++++.++|+.+++++ ++||+|++..+
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 98 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGDATEIELN-DKYDIAICHAF 98 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESCTTTCCCS-SCEEEEEEESC
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcchhhcCcC-CCeeEEEECCh
Confidence 47899999999999999999886 4799999999999999999987655 3899999999998874 79999999999
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEeccC-----CCCC-----cCccccChHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCH-----RDLA-----PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKL 305 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (371)
++|++++..++++++++|||||++++.+... .... +....+..+ ...+.......+. .+.+..++.++
T Consensus 99 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~ 176 (284)
T 3gu3_A 99 LLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVL-QKLFESDTQRNGK-DGNIGMKIPIY 176 (284)
T ss_dssp GGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHH-HHHHHHHHHHTCC-CTTGGGTHHHH
T ss_pred hhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHH-HHHHHHHhhhhcc-cccHHHHHHHH
Confidence 9999999999999999999999999988641 1000 000111112 2223322223332 25567889999
Q ss_pred HHhCCCceEEE----EecCCcccCc
Q 017428 306 LQSLSLEDIKA----EDWSQNVAPF 326 (371)
Q Consensus 306 l~~aGF~~v~~----~~~~~~~~~~ 326 (371)
|+++||++|++ .....+...|
T Consensus 177 l~~aGF~~v~~~~~~~~~~~~~~~~ 201 (284)
T 3gu3_A 177 LSELGVKNIECRVSDKVNFLDSNMH 201 (284)
T ss_dssp HHHTTCEEEEEEECCCCEEECTTCC
T ss_pred HHHcCCCeEEEEEcCCccccCCCCC
Confidence 99999999988 3344444444
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.87 E-value=1.7e-22 Score=177.33 Aligned_cols=150 Identities=16% Similarity=0.159 Sum_probs=115.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++. .++.+..+|+.+++++ ++||+|++..+++|
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred CCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 789999999999999999987 7899999999999999998753 4799999999998877 99999999999999
Q ss_pred cCCHHH--HHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHH----hhccCCCCCCCHHHHHHHHHhCCCc
Q 017428 239 MPDKSK--FVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI----CDAYYLPAWCSTADYVKLLQSLSLE 312 (371)
Q Consensus 239 ~~~~~~--~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ll~~aGF~ 312 (371)
+++... +++++.++|||||.+++.+....... ............. ........+.+.+++.++|+++||+
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQD----AYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHH----HHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEeccccChH----HHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCE
Confidence 998876 99999999999999999985432211 0000000000000 0000111245899999999999999
Q ss_pred eEEEEec
Q 017428 313 DIKAEDW 319 (371)
Q Consensus 313 ~v~~~~~ 319 (371)
++.+...
T Consensus 195 v~~~~~~ 201 (220)
T 3hnr_A 195 VTFTRLN 201 (220)
T ss_dssp EEEEECS
T ss_pred EEEeecc
Confidence 8776543
No 20
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.87 E-value=7.3e-21 Score=172.71 Aligned_cols=184 Identities=14% Similarity=0.169 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHH------HHHHHHHHHHHcC
Q 017428 134 HRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPV------QAQRANALAAARG 205 (371)
Q Consensus 134 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~--~~v~gvD~s~~------~~~~a~~~~~~~~ 205 (371)
....+.+....++..+.+.+ +.+|||||||+|.++..+++.++ .+|+|+|+|+. +++.|++++...+
T Consensus 24 ~~~~~~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~ 98 (275)
T 3bkx_A 24 IQRRQTAHRLAIAEAWQVKP-----GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP 98 (275)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-----TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHcCCCC-----CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC
Confidence 55667777888888887665 88999999999999999999863 79999999997 9999999998888
Q ss_pred CCCCeEEEEcC---CCCCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHH
Q 017428 206 LADKVSFQVGD---ALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQE 282 (371)
Q Consensus 206 ~~~~v~~~~~d---~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 282 (371)
+.+++.+..+| ...+++++++||+|++..+++|++++..+++.+.++++|||++++.++........ ........
T Consensus 99 ~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~--~~~~~~~~ 176 (275)
T 3bkx_A 99 LGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALD--QIGHLQAA 176 (275)
T ss_dssp TGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGG--GHHHHHHH
T ss_pred CCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchh--hhhHHHHH
Confidence 76789999998 44456678899999999999999999888888888888899999999765543211 11111111
Q ss_pred HHHHHh----h--ccCCCCCCCHHHHHHHHHhCCCceEEEEecCCccc
Q 017428 283 LLKKIC----D--AYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVA 324 (371)
Q Consensus 283 ~~~~~~----~--~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~ 324 (371)
+..... . ......+++.+++.++|+++||+++++..+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~~~~~ 224 (275)
T 3bkx_A 177 MIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVEDPTL 224 (275)
T ss_dssp HHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBCCTTC
T ss_pred HHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEecCCCC
Confidence 111111 1 11122367999999999999999999887755543
No 21
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=3.2e-22 Score=180.56 Aligned_cols=164 Identities=21% Similarity=0.203 Sum_probs=127.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
+.+.++..+...+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.++++|+.++
T Consensus 22 ~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~-------~~~~~~~~d~~~~ 88 (261)
T 3ege_A 22 IVNAIINLLNLPK-----GSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQQAVVH-------PQVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHHSSCCC-------TTEEEECCCTTSC
T ss_pred HHHHHHHHhCCCC-----CCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHHHHHhc-------cCCEEEECchhhC
Confidence 4455566665544 899999999999999999985 78999999999999887653 2799999999999
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
++++++||+|++..+++|++++..++++++++|| ||++++.++.......... ........ .... ..+.+.+
T Consensus 89 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~-~~~~~~~ 160 (261)
T 3ege_A 89 ALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWL--YDYFPFLW----EDAL-RFLPLDE 160 (261)
T ss_dssp CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGG--GGTCHHHH----HHHH-TSCCHHH
T ss_pred CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHH--HHHHHHHh----hhhh-hhCCCHH
Confidence 9888999999999999999999999999999999 9999998875433221110 01111111 1111 1255788
Q ss_pred HHHHHHHhCCCceEEEEecCCcccCc
Q 017428 301 DYVKLLQSLSLEDIKAEDWSQNVAPF 326 (371)
Q Consensus 301 ~~~~ll~~aGF~~v~~~~~~~~~~~~ 326 (371)
++. +|+++||+++++..+..+...|
T Consensus 161 ~~~-~l~~aGF~~v~~~~~~~p~~~~ 185 (261)
T 3ege_A 161 QIN-LLQENTKRRVEAIPFLLPHDLS 185 (261)
T ss_dssp HHH-HHHHHHCSEEEEEECCEETTCS
T ss_pred HHH-HHHHcCCCceeEEEecCCCcCc
Confidence 899 9999999999999987776544
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.87 E-value=1.2e-21 Score=171.38 Aligned_cols=168 Identities=18% Similarity=0.168 Sum_probs=130.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
+...++..+..++ + +|||+|||+|.++..+++..+.+|+|+|+|+.+++.|++++...++.+++.+.++|+.++
T Consensus 32 ~~~~~~~~~~~~~-----~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 32 IAENIINRFGITA-----G-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI 105 (219)
T ss_dssp HHHHHHHHHCCCE-----E-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC
T ss_pred HHHHHHHhcCCCC-----C-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC
Confidence 4566666666543 4 999999999999999998756799999999999999999999998878999999999999
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhcc-----CCCC
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY-----YLPA 295 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 295 (371)
++++++||+|++..+++|++++..++++++++|||||.+++.+..... .........+......+ ....
T Consensus 106 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (219)
T 3dlc_A 106 PIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK------ELRDSISAEMIRKNPDWKEFNRKNIS 179 (219)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH------HHHHHHHHHHHHHCTTHHHHHHHHSS
T ss_pred CCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH------HHHHHHHHHHHHhHHHHHhhhhhccc
Confidence 888899999999999999999999999999999999999998743221 01110111111110000 0012
Q ss_pred CCCHHHHHHHHHhCCCceEEEEecC
Q 017428 296 WCSTADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 296 ~~~~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
.++.+++.++|+++||+++++....
T Consensus 180 ~~~~~~~~~~l~~aGf~~v~~~~~~ 204 (219)
T 3dlc_A 180 QENVERFQNVLDEIGISSYEIILGD 204 (219)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEET
T ss_pred cCCHHHHHHHHHHcCCCeEEEEecC
Confidence 3478999999999999998876433
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=7.9e-22 Score=170.92 Aligned_cols=179 Identities=15% Similarity=0.145 Sum_probs=137.0
Q ss_pred HHHHHhcccchhhHhhhcccccccccCCCCCcCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHH
Q 017428 98 GIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLA 177 (371)
Q Consensus 98 ~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~ 177 (371)
.+.++|+..+..|...+....... ......+..++... +.+|||+|||+|.++..++
T Consensus 4 ~~~~~y~~~a~~y~~~~~~~~~~~--------------~~~~~~l~~~~~~~---------~~~vLDiGcG~G~~~~~l~ 60 (203)
T 3h2b_A 4 DVSKAYSSPTFDAEALLGTVISAE--------------DPDRVLIEPWATGV---------DGVILDVGSGTGRWTGHLA 60 (203)
T ss_dssp HHHHHHHCTTTCHHHHTCSSCCTT--------------CTTHHHHHHHHHHC---------CSCEEEETCTTCHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHhhhhcccc--------------HHHHHHHHHHhccC---------CCeEEEecCCCCHHHHHHH
Confidence 367888888888876654321110 00122333343321 5789999999999999999
Q ss_pred HHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcC--CHHHHHHHHHHhcCC
Q 017428 178 KKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMP--DKSKFVSELARVTAP 255 (371)
Q Consensus 178 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~Lkp 255 (371)
+. +.+|+|+|+|+.+++.++++. +++.++++|+.++++++++||+|++..+++|++ ++..+++++.++|||
T Consensus 61 ~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~p 133 (203)
T 3h2b_A 61 SL-GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVED 133 (203)
T ss_dssp HT-TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEE
T ss_pred hc-CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCC
Confidence 87 789999999999999999862 479999999999888889999999999999996 889999999999999
Q ss_pred CcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 256 AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 256 gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
||.+++..+......... .......+++.+++.++|+++||+++++.....
T Consensus 134 gG~l~i~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 134 GGGLLMSFFSGPSLEPMY---------------HPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp EEEEEEEEECCSSCEEEC---------------CSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred CcEEEEEEccCCchhhhh---------------chhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 999999986544311100 001111246899999999999999999987665
No 24
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.86 E-value=2.7e-21 Score=172.06 Aligned_cols=149 Identities=21% Similarity=0.305 Sum_probs=120.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ...++.++++|+.++++++++||+|++..+++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 3789999999999999999987 789999999999999998764 23589999999999988889999999999999
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
|++++..++++++++|+|||.+++.++........ .. +............++++++.++|+++||++++..
T Consensus 128 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 128 WTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRE-NS--------YPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp SSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGG-GG--------GGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhh-hh--------hhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 99999999999999999999999998654322110 00 1111111112235799999999999999999987
Q ss_pred ecC
Q 017428 318 DWS 320 (371)
Q Consensus 318 ~~~ 320 (371)
...
T Consensus 199 ~~~ 201 (242)
T 3l8d_A 199 GVY 201 (242)
T ss_dssp EEE
T ss_pred ccc
Confidence 543
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=1.4e-20 Score=164.56 Aligned_cols=189 Identities=20% Similarity=0.233 Sum_probs=134.0
Q ss_pred HHHHHHHHHhcccchhhHhhhcccccccccCCCCCcCcchHHHHHHHHHHHHHHHcC-CCCCCCCCCCEEEEECCCcChH
Q 017428 94 ELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGS 172 (371)
Q Consensus 94 ~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~VLDlG~GtG~~ 172 (371)
.+.+...++|+..+..|+..+.. ........++..+. +. ++.+|||||||+|.+
T Consensus 6 ~~~~~~~~~~~~~a~~y~~~~~~--------------------~~~~~~~~~~~~l~~~~-----~~~~vLdiG~G~G~~ 60 (218)
T 3ou2_A 6 GLIESQLSYYRARASEYDATFVP--------------------YMDSAAPAALERLRAGN-----IRGDVLELASGTGYW 60 (218)
T ss_dssp HHHHHHHHHHHHHGGGHHHHHHH--------------------HHTTTHHHHHHHHTTTT-----SCSEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh--------------------HHHHHHHHHHHHHhcCC-----CCCeEEEECCCCCHH
Confidence 44556778888777777654322 11112344444443 22 367999999999999
Q ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcCCH--HHHHHHHH
Q 017428 173 SRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK--SKFVSELA 250 (371)
Q Consensus 173 ~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~ 250 (371)
+..+++. +.+|+|+|+|+.+++.+++ .+. +++.++.+|+.++ +++++||+|++..+++|+++. ..+++++.
T Consensus 61 ~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~ 133 (218)
T 3ou2_A 61 TRHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVR 133 (218)
T ss_dssp HHHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHH
Confidence 9999998 8899999999999999987 343 5799999999987 678999999999999999885 89999999
Q ss_pred HhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHH-hhcc-------CCCCCCCHHHHHHHHHhCCCceEEEEec
Q 017428 251 RVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI-CDAY-------YLPAWCSTADYVKLLQSLSLEDIKAEDW 319 (371)
Q Consensus 251 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~ll~~aGF~~v~~~~~ 319 (371)
++|||||.+++.++...... +........... .... ....+++.+++.++|+++||+++..+..
T Consensus 134 ~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 134 SAVAPGGVVEFVDVTDHERR-----LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDEVH 205 (218)
T ss_dssp HHEEEEEEEEEEEECCCC-----------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHcCCCeEEEEEeCCCCccc-----cchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeeecc
Confidence 99999999999987653211 000000000000 0000 0123569999999999999996655443
No 26
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.86 E-value=4.8e-21 Score=182.35 Aligned_cols=154 Identities=20% Similarity=0.217 Sum_probs=122.9
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-----C-C-CCCeEEEEcCCCCC------C
Q 017428 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-----G-L-ADKVSFQVGDALQQ------P 221 (371)
Q Consensus 157 ~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-----~-~-~~~v~~~~~d~~~~------~ 221 (371)
.++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++++.. | . .+++.|+++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 358899999999999999999986 569999999999999999987654 2 2 25899999999987 7
Q ss_pred CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHH
Q 017428 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (371)
+++++||+|+++.+++|++++..++++++++|||||+|++.++....... ...... ...........++.++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~ 233 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLS------EAAQQD--PILYGECLGGALYLED 233 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCC------HHHHHC--HHHHHTTCTTCCBHHH
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccC------HhHhhh--HHHhhcccccCCCHHH
Confidence 88899999999999999999999999999999999999998865443221 111110 0111122234578999
Q ss_pred HHHHHHhCCCceEEEEe
Q 017428 302 YVKLLQSLSLEDIKAED 318 (371)
Q Consensus 302 ~~~ll~~aGF~~v~~~~ 318 (371)
+.++|+++||+++++..
T Consensus 234 ~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 234 FRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHCCCceEEEEe
Confidence 99999999999887654
No 27
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.86 E-value=4.2e-21 Score=171.02 Aligned_cols=198 Identities=13% Similarity=0.166 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHhcccchhhHhhhcccccccccCCCCCcCcchH-HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcC
Q 017428 92 ARELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDH-RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIG 170 (371)
Q Consensus 92 ~~~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG 170 (371)
....++.+.+||+.....|+..++..- ..... ......++..++..+.. ..++.+|||||||+|
T Consensus 27 ~~~~~~~~~~~w~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~vLDiGcG~G 91 (241)
T 2ex4_A 27 EKQFYSKAKTYWKQIPPTVDGMLGGYG-----------HISSIDINSSRKFLQRFLREGPN----KTGTSCALDCGAGIG 91 (241)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHTTTCG-----------GGHHHHHHHHHHHHHGGGC--------CCCCSEEEEETCTTT
T ss_pred cchhHHHHHHHHhcCCccccccccCCC-----------CcchhhHHhHHHHHHHHHHhccc----CCCCCEEEEECCCCC
Confidence 356677788899887777766543210 00001 12222333333332211 124789999999999
Q ss_pred hHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcCCH--HHHHHH
Q 017428 171 GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK--SKFVSE 248 (371)
Q Consensus 171 ~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~ 248 (371)
.++..+++....+|+|+|+|+.+++.|++++...+ ..++.++.+|+.++++++++||+|++..+++|+++. ..++++
T Consensus 92 ~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~ 170 (241)
T 2ex4_A 92 RITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRR 170 (241)
T ss_dssp HHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHH
Confidence 99999988755699999999999999999886653 246899999998888777899999999999999885 489999
Q ss_pred HHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 249 LARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 249 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
+.++|||||++++.+..... ...+. ........+.+++.++|+++||+++++.....
T Consensus 171 ~~~~LkpgG~l~i~~~~~~~----~~~~~------------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 227 (241)
T 2ex4_A 171 CKGSLRPNGIIVIKDNMAQE----GVILD------------DVDSSVCRDLDVVRRIICSAGLSLLAEERQEN 227 (241)
T ss_dssp HHHHEEEEEEEEEEEEEBSS----SEEEE------------TTTTEEEEBHHHHHHHHHHTTCCEEEEEECCS
T ss_pred HHHhcCCCeEEEEEEccCCC----cceec------------ccCCcccCCHHHHHHHHHHcCCeEEEeeecCC
Confidence 99999999999998865432 00000 00000124899999999999999999876543
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.86 E-value=7.9e-21 Score=170.29 Aligned_cols=188 Identities=15% Similarity=0.143 Sum_probs=139.2
Q ss_pred HHHHHHHhcccchhhHhhhcccccccccCCCCCcCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHH
Q 017428 96 KEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRY 175 (371)
Q Consensus 96 ~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~ 175 (371)
++...++|+.....|+...... .............++..+... ++.+|||||||+|.++..
T Consensus 50 ~~~~~~~w~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~l~~~-----~~~~vLDiG~G~G~~~~~ 110 (254)
T 1xtp_A 50 YGKALEYWRTVPATVSGVLGGM--------------DHVHDVDIEGSRNFIASLPGH-----GTSRALDCGAGIGRITKN 110 (254)
T ss_dssp HHHHHHHHHTSCSSHHHHTTTC--------------GGGHHHHHHHHHHHHHTSTTC-----CCSEEEEETCTTTHHHHH
T ss_pred hhhhhhHHhcCCccccceecCc--------------CccCHHHHHHHHHHHHhhccc-----CCCEEEEECCCcCHHHHH
Confidence 4456677776555555433211 113334445556677766544 378999999999999999
Q ss_pred HHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcC--CHHHHHHHHHHhc
Q 017428 176 LAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMP--DKSKFVSELARVT 253 (371)
Q Consensus 176 l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L 253 (371)
+++....+|+|+|+|+.+++.|++++... .++.++++|+.++++++++||+|++..+++|++ +...++++++++|
T Consensus 111 l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 187 (254)
T 1xtp_A 111 LLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQAL 187 (254)
T ss_dssp THHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred HHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhc
Confidence 98876568999999999999999987543 479999999999888889999999999999995 5789999999999
Q ss_pred CCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecC
Q 017428 254 APAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 254 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
||||++++.+........ +. .......+++.+++.++|+++||+++++....
T Consensus 188 kpgG~l~i~~~~~~~~~~----~~-----------~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 188 TPNGYIFFKENCSTGDRF----LV-----------DKEDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEEEEEEEEEBC--CCE----EE-----------ETTTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred CCCeEEEEEecCCCcccc----ee-----------cccCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 999999999854322110 00 00011114589999999999999999887643
No 29
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.85 E-value=7.8e-21 Score=171.14 Aligned_cols=155 Identities=19% Similarity=0.220 Sum_probs=119.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++ .+..+++.+.++|+.++++++++||+|++..+++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 4789999999999999999987 789999999999999999987 2234689999999999888889999999999999
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCC-----CCCCHHHHHHHHHhCCCc
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLP-----AWCSTADYVKLLQSLSLE 312 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~aGF~ 312 (371)
|++++..+++++.++|||||++++. +..... .....+ ...+.......+.+ .+++.+++.++|+++||+
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 189 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEG-WDQAEA----SPEWTL-QERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLK 189 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEE-EEEECC----CHHHHH-HHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCc----cHHHHH-HHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999987 332210 110001 11122222222211 245788999999999999
Q ss_pred eEEEEecCC
Q 017428 313 DIKAEDWSQ 321 (371)
Q Consensus 313 ~v~~~~~~~ 321 (371)
++.+.....
T Consensus 190 ~~~~~~~~~ 198 (263)
T 2yqz_A 190 PRTREVARW 198 (263)
T ss_dssp CEEEEEEEE
T ss_pred cceEEEeee
Confidence 877654433
No 30
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.85 E-value=1.2e-20 Score=168.13 Aligned_cols=152 Identities=11% Similarity=0.045 Sum_probs=115.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. .++.++++|+.++ .++++||+|++.++++|
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~-----~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLK-----DGITYIHSRFEDA-QLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSC-----SCEEEEESCGGGC-CCSSCEEEEEEESCGGG
T ss_pred CCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhh-----CCeEEEEccHHHc-CcCCcccEEEEhhHHHh
Confidence 678999999999999999887 5689999999999999998752 2799999999887 46789999999999999
Q ss_pred cCCHHHHHHHHH-HhcCCCcEEEEEeccCCCCCcCc----cccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 017428 239 MPDKSKFVSELA-RVTAPAGTIIIVTWCHRDLAPSE----ESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 239 ~~~~~~~l~~~~-~~LkpgG~l~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
++++..++++++ ++|||||++++.++......... ..+..+. . +...........+++.+++.++|+++||++
T Consensus 116 ~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 116 IDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNS-A-VTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTT-C-CCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred hcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccch-h-cccccccccccccCCHHHHHHHHHHCCCeE
Confidence 999999999999 99999999999886433210000 0000000 0 000000111123579999999999999999
Q ss_pred EEEEec
Q 017428 314 IKAEDW 319 (371)
Q Consensus 314 v~~~~~ 319 (371)
+++..+
T Consensus 194 ~~~~~~ 199 (250)
T 2p7i_A 194 TYRSGI 199 (250)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 988754
No 31
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.85 E-value=3.3e-20 Score=171.20 Aligned_cols=162 Identities=20% Similarity=0.232 Sum_probs=126.0
Q ss_pred CCCEEEEECCCcChHHHHHH-HHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLA-KKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~-~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 235 (371)
++.+|||||||+|.++..++ ... +.+|+|+|+|+.+++.|++++...++.++++++++|+.+++++ ++||+|++..+
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 48899999999999999985 333 6799999999999999999998888877799999999998877 99999999999
Q ss_pred ccCcCCHHH---HHHHHHHhcCCCcEEEEEeccCCCCCcCcc-----ccChHHHHHHHHHh---hccCCCCCCCHHHHHH
Q 017428 236 GEHMPDKSK---FVSELARVTAPAGTIIIVTWCHRDLAPSEE-----SLQPWEQELLKKIC---DAYYLPAWCSTADYVK 304 (371)
Q Consensus 236 l~~~~~~~~---~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 304 (371)
++|++++.. ++++++++|||||++++.++.......... .............. ...+...+++.+++.+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRA 276 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHH
Confidence 999988765 799999999999999998876543322211 11111111111111 1122334679999999
Q ss_pred HHHhCCCceEEEEecC
Q 017428 305 LLQSLSLEDIKAEDWS 320 (371)
Q Consensus 305 ll~~aGF~~v~~~~~~ 320 (371)
+|+++||+++++....
T Consensus 277 ~l~~aGF~~v~~~~~~ 292 (305)
T 3ocj_A 277 QLEEAGFTDLRFEDDR 292 (305)
T ss_dssp HHHHTTCEEEEEECCT
T ss_pred HHHHCCCEEEEEEccc
Confidence 9999999999988633
No 32
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.84 E-value=1.6e-20 Score=166.55 Aligned_cols=145 Identities=17% Similarity=0.236 Sum_probs=122.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+...++.++++|+.+.+ ++++||+|++..+++|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhc
Confidence 459999999999999999875 78999999999999999999876555567999999999876 4579999999999999
Q ss_pred cC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEE
Q 017428 239 MP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 239 ~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 316 (371)
++ +...+++++.++|||||.+++.++...... .+.+..++.+++.++|+++||+++++
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHV--------------------GGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCC--------------------SCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccC--------------------CCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 98 889999999999999999999886543221 11112368999999999999999999
Q ss_pred EecCCcccC
Q 017428 317 EDWSQNVAP 325 (371)
Q Consensus 317 ~~~~~~~~~ 325 (371)
+.....+.+
T Consensus 205 ~~~~~~~~~ 213 (235)
T 3lcc_A 205 EENPHAIPT 213 (235)
T ss_dssp EECTTCCTT
T ss_pred EecCCcccc
Confidence 887776644
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=1.5e-20 Score=163.03 Aligned_cols=154 Identities=15% Similarity=0.159 Sum_probs=117.4
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC-----------CCCCe
Q 017428 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG-----------LADKV 210 (371)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----------~~~~v 210 (371)
+..++..+.+.+ +.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++..... ...++
T Consensus 11 l~~~~~~l~~~~-----~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v 84 (203)
T 1pjz_A 11 LQQYWSSLNVVP-----GARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGI 84 (203)
T ss_dssp HHHHHHHHCCCT-----TCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred HHHHHHhcccCC-----CCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCcc
Confidence 344455555543 789999999999999999997 8899999999999999998764210 12579
Q ss_pred EEEEcCCCCCCCCC-CccceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHH
Q 017428 211 SFQVGDALQQPFPD-GQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI 287 (371)
Q Consensus 211 ~~~~~d~~~~~~~~-~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (371)
+++++|+.++++++ ++||+|++..+++|++. ...++++++++|||||++++.........
T Consensus 85 ~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~----------------- 147 (203)
T 1pjz_A 85 EIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL----------------- 147 (203)
T ss_dssp EEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS-----------------
T ss_pred EEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc-----------------
Confidence 99999999988665 78999999999999864 46799999999999999555543322100
Q ss_pred hhccCCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 288 CDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 288 ~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
..+.+...+.+++.+++++ ||+++.++....
T Consensus 148 --~~~~~~~~~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 148 --LEGPPFSVPQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp --SSSCCCCCCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred --cCCCCCCCCHHHHHHHhcC-CcEEEEeccccc
Confidence 0111223589999999999 999888776554
No 34
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.84 E-value=3.2e-20 Score=168.98 Aligned_cols=163 Identities=16% Similarity=0.212 Sum_probs=123.6
Q ss_pred HHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 017428 144 ETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP 223 (371)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 223 (371)
.++..+...+ +.+|||||||+|.++..+++ .+.+|+|+|+|+.|++.++++. +++.+.++|+.++++
T Consensus 48 ~l~~~l~~~~-----~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~- 114 (279)
T 3ccf_A 48 DLLQLLNPQP-----GEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV- 114 (279)
T ss_dssp HHHHHHCCCT-----TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC-
T ss_pred HHHHHhCCCC-----CCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc-
Confidence 3444444443 78999999999999999998 4789999999999999998764 478999999999886
Q ss_pred CCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhh---ccC-CCCCCCH
Q 017428 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD---AYY-LPAWCST 299 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~ 299 (371)
+++||+|++..+++|++++..++++++++|||||++++..+...... .+.......+..... ... ...+.+.
T Consensus 115 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (279)
T 3ccf_A 115 DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIK----YILEALYNALETLGIHNPQALNPWYFPSI 190 (279)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTH----HHHHHHHHHHHHHTCCCGGGGCCCCCCCH
T ss_pred CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchH----HHHHHHHHHHHhcCCccccCcCceeCCCH
Confidence 58999999999999999999999999999999999999876432210 111111111111111 011 1135689
Q ss_pred HHHHHHHHhCCCceEEEEecCCcc
Q 017428 300 ADYVKLLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 300 ~~~~~ll~~aGF~~v~~~~~~~~~ 323 (371)
+++.++|+++||+++.+..+..+.
T Consensus 191 ~~~~~~l~~aGf~~~~~~~~~~~~ 214 (279)
T 3ccf_A 191 GEYVNILEKQGFDVTYAALFNRPT 214 (279)
T ss_dssp HHHHHHHHHHTEEEEEEEEEECCE
T ss_pred HHHHHHHHHcCCEEEEEEEecccc
Confidence 999999999999999887665554
No 35
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.3e-19 Score=162.85 Aligned_cols=157 Identities=19% Similarity=0.186 Sum_probs=119.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
....++..+... ++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.++++ .+++.+.++|+.+
T Consensus 21 ~~~~l~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~ 89 (259)
T 2p35_A 21 PARDLLAQVPLE-----RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR------LPNTNFGKADLAT 89 (259)
T ss_dssp HHHHHHTTCCCS-----CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH------STTSEEEECCTTT
T ss_pred HHHHHHHhcCCC-----CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CCCcEEEECChhh
Confidence 344566655544 37899999999999999999987 68999999999999999886 2579999999999
Q ss_pred CCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHH--Hhhc-----cC
Q 017428 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK--ICDA-----YY 292 (371)
Q Consensus 220 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~ 292 (371)
++ ++++||+|++..+++|++++..++++++++|||||++++..+..... ............ .... ..
T Consensus 90 ~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
T 2p35_A 90 WK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE-----PTHIAMHETADGGPWKDAFSGGGLR 163 (259)
T ss_dssp CC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS-----HHHHHHHHHHHHSTTGGGC------
T ss_pred cC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc-----HHHHHHHHHhcCcchHHHhcccccc
Confidence 87 77899999999999999999999999999999999999988542210 000011111111 0000 01
Q ss_pred CCCCCCHHHHHHHHHhCCCceE
Q 017428 293 LPAWCSTADYVKLLQSLSLEDI 314 (371)
Q Consensus 293 ~~~~~~~~~~~~ll~~aGF~~v 314 (371)
...+.+.+++.++|+++||.+.
T Consensus 164 ~~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 164 RKPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp -CCCCCHHHHHHHHGGGEEEEE
T ss_pred ccCCCCHHHHHHHHHhcCCceE
Confidence 1236799999999999999743
No 36
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.83 E-value=1.1e-19 Score=166.58 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=121.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~l 236 (371)
++.+|||||||+|.++..+++....+|+|+|+|+.+++.|++++...++..++.++++|+.+.++ ++++||+|++..++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 37899999999999999988863349999999999999999999888776689999999999887 57899999999999
Q ss_pred cC----cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCc-------CccccChHHH--HHHHH-Hhhcc----------C
Q 017428 237 EH----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAP-------SEESLQPWEQ--ELLKK-ICDAY----------Y 292 (371)
Q Consensus 237 ~~----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-------~~~~~~~~~~--~~~~~-~~~~~----------~ 292 (371)
+| ..+...+++++.++|||||++++.......... ....+..... ..+.. ....+ .
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 223 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNC 223 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCC
Confidence 77 456789999999999999999998754210000 0000000000 00000 00000 0
Q ss_pred CCCCCCHHHHHHHHHhCCCceEEEEecCCcc
Q 017428 293 LPAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 293 ~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~ 323 (371)
...+++++++.++|+++||+++++..+...+
T Consensus 224 ~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~ 254 (298)
T 1ri5_A 224 IEYFVDFTRMVDGFKRLGLSLVERKGFIDFY 254 (298)
T ss_dssp EEECCCHHHHHHHHHTTTEEEEEEEEHHHHH
T ss_pred cccccCHHHHHHHHHHcCCEEEEecCHHHHH
Confidence 0125689999999999999999987765544
No 37
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.83 E-value=6.5e-20 Score=163.18 Aligned_cols=141 Identities=18% Similarity=0.196 Sum_probs=114.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v~~~~~ 235 (371)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ +.++.+|+.+. ++++++||+|++..+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISHF 110 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred CCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence 4789999999999999999887 78999999999999998863 78899998775 778899999999999
Q ss_pred ccCcC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 017428 236 GEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 236 l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
++|++ +...++++++++|||||++++..+..... . .... .........+++.+++.++|+++||++
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-------~----~~~~-~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL-------Y----SLIN-FYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH-------H----HHHH-HTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh-------H----HHHH-HhcCccccccCCHHHHHHHHHHCCCeE
Confidence 99998 55999999999999999999987643211 0 1111 111111223578999999999999999
Q ss_pred EEEEecC
Q 017428 314 IKAEDWS 320 (371)
Q Consensus 314 v~~~~~~ 320 (371)
+++..+.
T Consensus 179 ~~~~~~~ 185 (240)
T 3dli_A 179 VKIEFFE 185 (240)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9988776
No 38
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.83 E-value=1.1e-19 Score=160.60 Aligned_cols=160 Identities=22% Similarity=0.297 Sum_probs=123.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCCCCCCccceEEcc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPDGQFDLVWSM 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~fD~v~~~ 233 (371)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ ..++.+..+|+..+++++++||+|++.
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 3789999999999999999987 78999999999999999998876665 236899999999988888999999999
Q ss_pred ccccCcCCHH---HHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhc--c-----------CCCCCC
Q 017428 234 ESGEHMPDKS---KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA--Y-----------YLPAWC 297 (371)
Q Consensus 234 ~~l~~~~~~~---~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~ 297 (371)
.+++|++++. .+++++.++|||||.+++.++....... .+.......+...... + ....++
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK---LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH---HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH---HHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 9999999887 8999999999999999999876533221 1110000101000000 0 001257
Q ss_pred CHHHHHHHHHhCCCceEEEEecCC
Q 017428 298 STADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 298 ~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
+.+++.++|+++||+++++.....
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~~~~ 209 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRVKEL 209 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEecce
Confidence 999999999999999998876443
No 39
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=3.9e-20 Score=166.05 Aligned_cols=100 Identities=24% Similarity=0.365 Sum_probs=90.0
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++ .+++.+.++|++++++++++||+|++..++|+
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~ 111 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHW 111 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCCCCSSCEEEEEECSCCTT
T ss_pred CCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhcccCCcccEEEEeeehhH
Confidence 578999999999999999987 6899999999999988764 25899999999999999999999999999977
Q ss_pred cCCHHHHHHHHHHhcCCCcEEEEEeccCC
Q 017428 239 MPDKSKFVSELARVTAPAGTIIIVTWCHR 267 (371)
Q Consensus 239 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 267 (371)
+ ++..++++++|+|||||.|++..+...
T Consensus 112 ~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 112 F-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp C-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred h-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 6 688999999999999999999886543
No 40
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.83 E-value=5.1e-20 Score=165.10 Aligned_cols=160 Identities=15% Similarity=0.139 Sum_probs=118.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+++....+|+|+|+|+.+++.|+++.. ..++.+..+|+.++++++++||+|++..+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSLALH 119 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEchhhh
Confidence 488999999999999999998743399999999999999998764 3589999999999888889999999999999
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCc---------cc-cChHHHHHHHHH-hh-c----cCCCCCCCHHH
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSE---------ES-LQPWEQELLKKI-CD-A----YYLPAWCSTAD 301 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~---------~~-~~~~~~~~~~~~-~~-~----~~~~~~~~~~~ 301 (371)
|++++..++++++++|||||.+++............ .. ...+. .++... .. . .......+.++
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~ 198 (253)
T 3g5l_A 120 YIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVD-RYFNESMRTSHFLGEDVQKYHRTVTT 198 (253)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEEC-CTTCCCEEEEEETTEEEEEECCCHHH
T ss_pred hhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEec-cccccceEEEeeccccCccEecCHHH
Confidence 999999999999999999999999753211000000 00 00000 000000 00 0 00000238999
Q ss_pred HHHHHHhCCCceEEEEecCCc
Q 017428 302 YVKLLQSLSLEDIKAEDWSQN 322 (371)
Q Consensus 302 ~~~ll~~aGF~~v~~~~~~~~ 322 (371)
+.++|+++||+++++.+...+
T Consensus 199 ~~~~l~~aGF~~~~~~e~~~~ 219 (253)
T 3g5l_A 199 YIQTLLKNGFQINSVIEPEPA 219 (253)
T ss_dssp HHHHHHHTTEEEEEEECCCCC
T ss_pred HHHHHHHcCCeeeeeecCCCc
Confidence 999999999999998876544
No 41
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.83 E-value=3.9e-19 Score=163.49 Aligned_cols=160 Identities=21% Similarity=0.277 Sum_probs=121.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCCCCC------Cccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQPFPD------GQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~------~~fD 228 (371)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++++.. +..+++.++++|+.++++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 38899999999999999999754 789999999999999999999886 44579999999999988776 8999
Q ss_pred eEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCC--CCHHHHHHHH
Q 017428 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW--CSTADYVKLL 306 (371)
Q Consensus 229 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll 306 (371)
+|++..+++|+ ++..+++++.++|||||.|++.++..+.... ...+......+... .....+.+ ...+.+.+++
T Consensus 116 ~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~w~~p~~~~~~~~l 191 (299)
T 3g5t_A 116 MITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPD-YPEFDDLMIEVPYG--KQGLGPYWEQPGRSRLRNML 191 (299)
T ss_dssp EEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTT-CGGGTTHHHHHHHC--TTTTGGGSCTTHHHHHHTTT
T ss_pred EEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccC-cHHHHHHHHHhccC--cccccchhhchhhHHHHHhh
Confidence 99999999999 9999999999999999999996654322211 11222222222211 00111112 2566789999
Q ss_pred HhCCC-----ceEEEEecCC
Q 017428 307 QSLSL-----EDIKAEDWSQ 321 (371)
Q Consensus 307 ~~aGF-----~~v~~~~~~~ 321 (371)
+++|| ..++...+..
T Consensus 192 ~~~gfp~~~f~~v~~~~~~~ 211 (299)
T 3g5t_A 192 KDSHLDPELFHDIQVSYFCA 211 (299)
T ss_dssp TTCCCCTTTEEEEEEEEECG
T ss_pred hccCCChHHcCcceEEEecc
Confidence 99999 6776666644
No 42
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.83 E-value=6.9e-20 Score=159.66 Aligned_cols=139 Identities=15% Similarity=0.152 Sum_probs=114.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++ ++.+..+|+.+++ ++++||+|++..+++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHACLL 113 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSCGG
T ss_pred CCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCchh
Confidence 3789999999999999999987 789999999999999999876 4678899998888 779999999999999
Q ss_pred CcC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC-CceE
Q 017428 238 HMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS-LEDI 314 (371)
Q Consensus 238 ~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v 314 (371)
|++ +...++++++++|||||++++.......... ... .....+++.+++.++|+++| |+++
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~--------------~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 114 HVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR--DKL--------------ARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE--CTT--------------SCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc--ccc--------------chhccCCCHHHHHHHHHhCCCcEEE
Confidence 998 7789999999999999999998654322110 000 00113579999999999999 9999
Q ss_pred EEEecCC
Q 017428 315 KAEDWSQ 321 (371)
Q Consensus 315 ~~~~~~~ 321 (371)
++.....
T Consensus 178 ~~~~~~~ 184 (211)
T 3e23_A 178 AVESSEG 184 (211)
T ss_dssp EEEEEEE
T ss_pred EEEeccC
Confidence 8876543
No 43
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.82 E-value=1.6e-18 Score=164.06 Aligned_cols=162 Identities=20% Similarity=0.265 Sum_probs=128.4
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
...++..+.... ..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.+++++..+|+. .
T Consensus 191 ~~~l~~~~~~~~-----~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~ 263 (369)
T 3gwz_A 191 AGQVAAAYDFSG-----AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-E 263 (369)
T ss_dssp HHHHHHHSCCTT-----CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-T
T ss_pred HHHHHHhCCCcc-----CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-C
Confidence 455666665544 7899999999999999999987 679999999 9999999999999888889999999998 4
Q ss_pred CCCCCccceEEccccccCcCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCC
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
+++. .||+|++.++++++++.. .++++++++|+|||+|++.+...+...... ..+ ..+.-... .+ ...++
T Consensus 264 ~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~-~d~~~~~~--~~-g~~~t 335 (369)
T 3gwz_A 264 TIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS---TLF-VDLLLLVL--VG-GAERS 335 (369)
T ss_dssp CCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH---HHH-HHHHHHHH--HS-CCCBC
T ss_pred CCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc---hhH-hhHHHHhh--cC-CccCC
Confidence 5555 899999999999998875 799999999999999999997655432111 111 11111111 11 12468
Q ss_pred HHHHHHHHHhCCCceEEEEe
Q 017428 299 TADYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~ 318 (371)
.++|.++|+++||+++++..
T Consensus 336 ~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 336 ESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp HHHHHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEE
Confidence 99999999999999999876
No 44
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.82 E-value=7.2e-19 Score=164.14 Aligned_cols=151 Identities=19% Similarity=0.122 Sum_probs=121.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++|..+|+. .+++. +||+|++.+++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhh
Confidence 46899999999999999999987 679999999 9999999999999888889999999997 45554 89999999999
Q ss_pred cCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceE
Q 017428 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (371)
Q Consensus 237 ~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 314 (371)
|++++. ..++++++++|+|||+|++.+...+... . .... ....... .. ...++.++|.++|+++||+++
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~----~-~~~~-d~~~~~~-~~--~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEH----A-GTGM-DLRMLTY-FG--GKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-------C-CHHH-HHHHHHH-HS--CCCCCHHHHHHHHHHTTEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCC----c-cHHH-HHHHHhh-CC--CCCCCHHHHHHHHHHCCCEEE
Confidence 999885 8899999999999999999997654431 1 1111 1111111 11 124689999999999999999
Q ss_pred EEEecC
Q 017428 315 KAEDWS 320 (371)
Q Consensus 315 ~~~~~~ 320 (371)
++....
T Consensus 317 ~~~~~~ 322 (332)
T 3i53_A 317 AAHPIS 322 (332)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 887654
No 45
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.82 E-value=1.5e-20 Score=165.26 Aligned_cols=153 Identities=20% Similarity=0.308 Sum_probs=112.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCC-CCccceEEccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFP-DGQFDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~-~~~fD~v~~~~ 234 (371)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.+...|+.++ ++. +++||+|++..
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEECc
Confidence 689999999999999999987 78999999999999999876 3577888888765 433 34599999999
Q ss_pred cccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHhCCCc
Q 017428 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY--YLPAWCSTADYVKLLQSLSLE 312 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~aGF~ 312 (371)
+++ ..++..++++++++|||||++++.++........ .....+....+......+ ....+++.+++.++|+++||+
T Consensus 125 ~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 202 (227)
T 3e8s_A 125 ALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADG-DYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLR 202 (227)
T ss_dssp CCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT-CCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEE
T ss_pred hhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCcc-ccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCe
Confidence 999 7889999999999999999999998754432211 000000000000000000 001246899999999999999
Q ss_pred eEEEEecCC
Q 017428 313 DIKAEDWSQ 321 (371)
Q Consensus 313 ~v~~~~~~~ 321 (371)
++++.....
T Consensus 203 ~~~~~~~~~ 211 (227)
T 3e8s_A 203 LVSLQEPQH 211 (227)
T ss_dssp EEEEECCCC
T ss_pred EEEEecCCC
Confidence 999886443
No 46
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.81 E-value=4.3e-19 Score=160.31 Aligned_cols=161 Identities=16% Similarity=0.161 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHHHhcccchhhHhhhcccccccccCCCCC--cCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECC
Q 017428 90 AAARELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSS--VSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGC 167 (371)
Q Consensus 90 ~~~~~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~ 167 (371)
..++.+.+.+.++|+.....|+..|++.++.+. .+-. .... ......++++.-+..+.+++ +.+||||||
T Consensus 60 ~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~--~p~~~l~~fp-y~~~~~~l~~~E~~la~l~~-----g~rVLDIGc 131 (298)
T 3fpf_A 60 AEMNHALSLIRKFYVNLGMKLEMEKAQEVIESD--SPWETLRSFY-FYPRYLELLKNEAALGRFRR-----GERAVFIGG 131 (298)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS--SHHHHHHTST-THHHHHHHHHHHHHHTTCCT-----TCEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--ChHHhhccCC-CcccHHHHHHHHHHHcCCCC-----cCEEEEECC
Confidence 457889999999999999999999998775431 0000 0000 11112333444445566654 899999999
Q ss_pred CcChHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccCcCCHHHHH
Q 017428 168 GIGGSSRY-LAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFV 246 (371)
Q Consensus 168 GtG~~~~~-l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l 246 (371)
|+|.++.. +++..+++|+|+|+|+.|++.|+++++..++ .+++|+++|+.+++ +++||+|++... .++...++
T Consensus 132 G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l 205 (298)
T 3fpf_A 132 GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVF 205 (298)
T ss_dssp CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHH
T ss_pred CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHH
Confidence 99977644 4443489999999999999999999999888 79999999998865 689999997654 57899999
Q ss_pred HHHHHhcCCCcEEEEEec
Q 017428 247 SELARVTAPAGTIIIVTW 264 (371)
Q Consensus 247 ~~~~~~LkpgG~l~i~~~ 264 (371)
+++.++|||||+|++.+.
T Consensus 206 ~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 206 RNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp HHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHcCCCcEEEEEcC
Confidence 999999999999999763
No 47
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.81 E-value=6e-19 Score=166.43 Aligned_cols=166 Identities=22% Similarity=0.270 Sum_probs=130.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
....++..+...+ +.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...+++++++++.+|+.+
T Consensus 178 ~~~~l~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 251 (359)
T 1x19_A 178 AIQLLLEEAKLDG-----VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYK 251 (359)
T ss_dssp HHHHHHHHCCCTT-----CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTT
T ss_pred hHHHHHHhcCCCC-----CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcccc
Confidence 3456666666544 7899999999999999999987 679999999 99999999999988887789999999998
Q ss_pred CCCCCCccceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHH---hhccCCC
Q 017428 220 QPFPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI---CDAYYLP 294 (371)
Q Consensus 220 ~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 294 (371)
.++++ +|+|++..+++++++ ...++++++++|||||++++.++..+... ...+ ...+... .......
T Consensus 252 ~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~--~~~~----~~~~~~~~~~~~g~~~~ 323 (359)
T 1x19_A 252 ESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPE--NPNF----DYLSHYILGAGMPFSVL 323 (359)
T ss_dssp SCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTT--SCCH----HHHHHHGGGGGSSCCCC
T ss_pred CCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCC--CchH----HHHHHHHHhcCCCCccc
Confidence 77654 399999999999987 78899999999999999999997654321 1111 1111111 1111122
Q ss_pred CCCCHHHHHHHHHhCCCceEEEEecC
Q 017428 295 AWCSTADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 295 ~~~~~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
.+++.++|.++|+++||+++++....
T Consensus 324 ~~~t~~e~~~ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 324 GFKEQARYKEILESLGYKDVTMVRKY 349 (359)
T ss_dssp CCCCGGGHHHHHHHHTCEEEEEEEET
T ss_pred CCCCHHHHHHHHHHCCCceEEEEecC
Confidence 34799999999999999999887654
No 48
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.81 E-value=1.6e-19 Score=165.47 Aligned_cols=148 Identities=16% Similarity=0.232 Sum_probs=108.7
Q ss_pred CCCEEEEECCCcChHHHHHH----HHc-CCE--EEEEeCCHHHHHHHHHHHHHc-CCCCCeEEE--EcCCCCCC------
Q 017428 158 RPKNVVDVGCGIGGSSRYLA----KKF-GAK--CQGITLSPVQAQRANALAAAR-GLADKVSFQ--VGDALQQP------ 221 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~----~~~-~~~--v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~--~~d~~~~~------ 221 (371)
++.+|||||||+|.++..++ ..+ +.. ++|+|+|+.|++.|++++... ++ +++.+. .+++.+++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhccc
Confidence 47899999999998765443 333 454 499999999999999998754 33 456554 45544332
Q ss_pred CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccC---CCCCCC
Q 017428 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY---LPAWCS 298 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 298 (371)
+++++||+|++..+++|++|+..++++++++|||||++++....... .+ ..++........ ...+++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~ 200 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS---------GW-DKLWKKYGSRFPQDDLCQYIT 200 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS---------HH-HHHHHHHGGGSCCCTTCCCCC
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc---------cH-HHHHHHHHHhccCCCcccCCC
Confidence 45789999999999999999999999999999999999998754211 11 122333222221 123678
Q ss_pred HHHHHHHHHhCCCceEEE
Q 017428 299 TADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~ 316 (371)
.+++.++|+++||+++..
T Consensus 201 ~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 201 SDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCceEEE
Confidence 999999999999998764
No 49
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=2e-19 Score=157.48 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=111.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEcCCCCCCCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQVGDALQQPFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+++. ++.+.++|+...+.+.++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 7899999999999999999875 3699999999999999999988777653 8999999998777777899999999
Q ss_pred ccccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHH----HHHH
Q 017428 234 ESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV----KLLQ 307 (371)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ll~ 307 (371)
.+++|+++. ..+++++.++|||||.+++...... ...+.... ............++.+++. ++++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 110 EVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEY-----NVKFANLP----AGKLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHH-----HHHTC---------------CCSCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCccc-----chhhcccc----cccccccccccccCHHHHHHHHHHHHH
Confidence 999999865 8999999999999997777653100 00000000 0000001111246899998 8999
Q ss_pred hCCCceEE
Q 017428 308 SLSLEDIK 315 (371)
Q Consensus 308 ~aGF~~v~ 315 (371)
++||+++.
T Consensus 181 ~~Gf~v~~ 188 (217)
T 3jwh_A 181 RFAYNVQF 188 (217)
T ss_dssp HSSEEEEE
T ss_pred HcCceEEE
Confidence 99998654
No 50
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.81 E-value=1.2e-19 Score=152.66 Aligned_cols=133 Identities=23% Similarity=0.325 Sum_probs=112.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++..+++.. .+|+|+|+++.+++.++++ .+++.+..+| .++++++||+|++..+++|
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred CCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 7899999999999999999975 4999999999999999987 2589999999 5667889999999999999
Q ss_pred cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEe
Q 017428 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 239 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 318 (371)
++++..+++++.++|||||++++.++.......... ....++.+++.++|+ ||++++...
T Consensus 88 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 88 MDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPP------------------LSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC------------------GGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred ccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCch------------------HhhhcCHHHHHHHHh--CcEEEEccC
Confidence 999999999999999999999999876543221100 012468999999999 999999877
Q ss_pred cCC
Q 017428 319 WSQ 321 (371)
Q Consensus 319 ~~~ 321 (371)
+..
T Consensus 148 ~~~ 150 (170)
T 3i9f_A 148 PTP 150 (170)
T ss_dssp SST
T ss_pred CCC
Confidence 653
No 51
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.81 E-value=2.8e-20 Score=179.05 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeE-E
Q 017428 134 HRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVS-F 212 (371)
Q Consensus 134 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~-~ 212 (371)
+.....++...++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +++.... +
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~-----~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~ 157 (416)
T 4e2x_A 88 MREHFAMLARDFLATELTGP-----DPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFF 157 (416)
T ss_dssp HHHHHHHHHHHHHHTTTCSS-----SCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCC
T ss_pred HHHHHHHHHHHHHHHhCCCC-----CCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeee
Confidence 34455667777777776554 889999999999999999986 78999999999999998875 3221111 1
Q ss_pred EEcCCCCCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHH-Hhhcc
Q 017428 213 QVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK-ICDAY 291 (371)
Q Consensus 213 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 291 (371)
...+...+++++++||+|++.++++|++++..++++++++|||||++++...... ..... .....
T Consensus 158 ~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~--------------~~~~~~~~~~~ 223 (416)
T 4e2x_A 158 EKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLG--------------DIVAKTSFDQI 223 (416)
T ss_dssp SHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHH--------------HHHHHTCGGGC
T ss_pred chhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChH--------------Hhhhhcchhhh
Confidence 2233333455678999999999999999999999999999999999999764311 11111 01111
Q ss_pred --CCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 292 --YLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 292 --~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
....+++.+++.++++++||+++++..+..
T Consensus 224 ~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~ 255 (416)
T 4e2x_A 224 FDEHFFLFSATSVQGMAQRCGFELVDVQRLPV 255 (416)
T ss_dssp STTCCEECCHHHHHHHHHHTTEEEEEEEEECG
T ss_pred hhhhhhcCCHHHHHHHHHHcCCEEEEEEEccC
Confidence 111257999999999999999999988653
No 52
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.81 E-value=9.2e-20 Score=167.65 Aligned_cols=174 Identities=13% Similarity=0.103 Sum_probs=124.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA--DKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~ 218 (371)
.+..++..+... +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. .++.++++|+.
T Consensus 71 ~~~~~~~~~~~~------~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 71 EAREFATRTGPV------SGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHCCC------CSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHhhCCC------CCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 344555555433 459999999999999999987 789999999999999999998876532 57999999999
Q ss_pred CCCCCCCccceEEcc-ccccCcC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccc-cChHH---HHHHHHHhhc-
Q 017428 219 QQPFPDGQFDLVWSM-ESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEES-LQPWE---QELLKKICDA- 290 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~-~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~- 290 (371)
++++ +++||+|++. .++++++ +...++++++++|||||.|++..+........... ...+. ...+ .....
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 221 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRY-VLHVRH 221 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC--------------CCEEE
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEE-EEEEEE
Confidence 9887 6899998865 6677765 35899999999999999999988654321100000 00000 0000 00000
Q ss_pred ------------------------cCCCCCCCHHHHHHHHHhCCCceEEEEecCCcc
Q 017428 291 ------------------------YYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 291 ------------------------~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~ 323 (371)
.....+++.+++.++|+++||+++++..+..+-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g 278 (299)
T 3g2m_A 222 LPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGG 278 (299)
T ss_dssp EEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTS
T ss_pred eccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCC
Confidence 000014699999999999999999999887543
No 53
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.81 E-value=3.6e-19 Score=168.18 Aligned_cols=157 Identities=17% Similarity=0.209 Sum_probs=120.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v~~~~~ 235 (371)
..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+. |++ ++||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~v 257 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQF 257 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEech
Confidence 6899999999999999999987 789999999 999999999998888777899999999886 466 78999999999
Q ss_pred ccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 017428 236 GEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 236 l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
+|++++. ..++++++++|||||+|++.+...+........+. ..................++.++|.++|+++||++
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYC-LTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHH-HHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhH-HHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 9999765 57899999999999999999975543221100000 00000000011111123569999999999999998
Q ss_pred EEEEe
Q 017428 314 IKAED 318 (371)
Q Consensus 314 v~~~~ 318 (371)
+++..
T Consensus 337 v~~~~ 341 (363)
T 3dp7_A 337 EEIQD 341 (363)
T ss_dssp SCCCC
T ss_pred EEEEe
Confidence 87653
No 54
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.81 E-value=1.4e-18 Score=162.20 Aligned_cols=168 Identities=14% Similarity=0.185 Sum_probs=129.2
Q ss_pred HHHHHHHcCC--CCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 142 IEETLRFAGV--SEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 142 ~~~~l~~~~~--~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
...++..+.. .+ +.+|||+|||+|.++..+++.+ +.+++++|++ .+++.|++++...++.+++++..+|+.
T Consensus 152 ~~~~~~~~~~~~~~-----~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 152 AQLIAQLVNENKIE-----PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAF 225 (335)
T ss_dssp HHHHHHHHTC--CC-----CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTT
T ss_pred HHHHHHhcccccCC-----CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccc
Confidence 4455665554 43 7899999999999999999987 6799999999 999999999988888778999999998
Q ss_pred CCCCCCCccceEEccccccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHh-hccCCCC
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC-DAYYLPA 295 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 295 (371)
+.+++.+ ||+|++.++++|+++. ..++++++++|+|||++++.++..+..... ......+.... .......
T Consensus 226 ~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 299 (335)
T 2r3s_A 226 EVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRIT-----PPDAAAFSLVMLATTPNGD 299 (335)
T ss_dssp TSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSC-----SHHHHHHHHHHHHHSSSCC
T ss_pred cCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCC-----chHHHHHHHHHHeeCCCCC
Confidence 8776544 9999999999999554 799999999999999999999765432111 11111111110 0011123
Q ss_pred CCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 296 WCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 296 ~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
.++.++|.++|+++||+++++.....
T Consensus 300 ~~t~~~~~~ll~~aGf~~~~~~~~~~ 325 (335)
T 2r3s_A 300 AYTFAEYESMFSNAGFSHSQLHSLPT 325 (335)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEECCTT
T ss_pred cCCHHHHHHHHHHCCCCeeeEEECCC
Confidence 57999999999999999999876543
No 55
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.81 E-value=2.3e-19 Score=157.32 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=113.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEcCCCCCCCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQVGDALQQPFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+++. ++.++.+|+...+.++++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 7899999999999999999875 3799999999999999999987776654 8999999998877777899999999
Q ss_pred ccccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHH----HHHH
Q 017428 234 ESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV----KLLQ 307 (371)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ll~ 307 (371)
.+++|+++. ..+++++.++|||||.+++....... ..+.......+ ........++.+++. ++++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~l~~ 180 (219)
T 3jwg_A 110 EVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYN-----FHYGNLFEGNL----RHRDHRFEWTRKEFQTWAVKVAE 180 (219)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGG-----GCCCCT---------GGGCCTTSBCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhh-----hhhcccCcccc----cccCceeeecHHHHHHHHHHHHH
Confidence 999999865 79999999999999966665432110 00100000000 011111246889988 8899
Q ss_pred hCCCceEEE
Q 017428 308 SLSLEDIKA 316 (371)
Q Consensus 308 ~aGF~~v~~ 316 (371)
++||++...
T Consensus 181 ~~Gf~v~~~ 189 (219)
T 3jwg_A 181 KYGYSVRFL 189 (219)
T ss_dssp HHTEEEEEE
T ss_pred HCCcEEEEE
Confidence 999976544
No 56
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.80 E-value=6.8e-19 Score=154.39 Aligned_cols=138 Identities=21% Similarity=0.224 Sum_probs=110.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||||||+|.++..++.. +|+|+|+.+++.++++ ++.+..+|+.++++++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 679999999999999887653 9999999999999874 588999999998888889999999999999
Q ss_pred cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhc---cCCCCCCCHHHHHHHHHhCCCceEE
Q 017428 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA---YYLPAWCSTADYVKLLQSLSLEDIK 315 (371)
Q Consensus 239 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ll~~aGF~~v~ 315 (371)
++++..+++++.++|+|||.+++.+..... .+ ...+...... +....+++.+++.++|+++||++++
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDRES---------FL-GREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECSSS---------HH-HHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCCcc---------HH-HHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 999999999999999999999998764321 11 1111111111 1112357999999999999999988
Q ss_pred EEec
Q 017428 316 AEDW 319 (371)
Q Consensus 316 ~~~~ 319 (371)
+...
T Consensus 185 ~~~~ 188 (219)
T 1vlm_A 185 VVQT 188 (219)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 7654
No 57
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.80 E-value=1e-18 Score=152.11 Aligned_cols=131 Identities=21% Similarity=0.334 Sum_probs=105.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||+|||+|.++..+ +. +|+|+|+|+.+++.++++. +++.++.+|+.++++++++||+|++..++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 3789999999999998877 55 9999999999999998875 47899999999998888999999999999
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHH-hh---ccCCCCCCCHHHHHHHHHhCC
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI-CD---AYYLPAWCSTADYVKLLQSLS 310 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~ll~~aG 310 (371)
+|++++..+++++.++|||||.+++.++.... .+. ...... .. .+....+++.+++.++|+ |
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 106 EFVEDVERVLLEARRVLRPGGALVVGVLEALS---------PWA-ALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp TTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS---------HHH-HHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC---------cHH-HHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 99999999999999999999999998865321 111 111111 11 111224689999999999 7
No 58
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.80 E-value=6e-19 Score=159.04 Aligned_cols=100 Identities=23% Similarity=0.348 Sum_probs=89.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccc-ccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 237 (371)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++. .++.++++|+.++++ +++||+|++.. +++
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~ 122 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRN------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIG 122 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCCC-SCCEEEEEECTTGGG
T ss_pred CCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChHHCCc-cCCcCEEEEcCchhh
Confidence 689999999999999999887 679999999999999999874 379999999999877 68999999998 999
Q ss_pred CcC---CHHHHHHHHHHhcCCCcEEEEEeccC
Q 017428 238 HMP---DKSKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 238 ~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
|+. +...++++++++|||||.+++..+..
T Consensus 123 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 123 HLAGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp GSCHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 996 55688999999999999999976543
No 59
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.80 E-value=1.9e-18 Score=153.53 Aligned_cols=154 Identities=19% Similarity=0.327 Sum_probs=116.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++... .++.+..+|+.++++++++||+|++..++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDLAYSSLAL 117 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred CCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceEEEEeccc
Confidence 3789999999999999999887 66 999999999999999886532 36999999999888878999999999999
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCcc------------ccChH------HHHHHHHHhhccCCCCCCC
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE------------SLQPW------EQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~------------~~~~~------~~~~~~~~~~~~~~~~~~~ 298 (371)
+|+++...+++++.++|+|||.+++............. ..... ...++. .... ...++
T Consensus 118 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~t 193 (243)
T 3bkw_A 118 HYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLA---KGVV-KHHRT 193 (243)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHH---HSCC-EEECC
T ss_pred cccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeecc---CceE-EEecc
Confidence 99999999999999999999999998743110000000 00000 000011 0111 11258
Q ss_pred HHHHHHHHHhCCCceEEEEecC
Q 017428 299 TADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
.+++.++|+++||+++++....
T Consensus 194 ~~~~~~~l~~aGF~~~~~~~~~ 215 (243)
T 3bkw_A 194 VGTTLNALIRSGFAIEHVEEFC 215 (243)
T ss_dssp HHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHHHHHHcCCEeeeeccCC
Confidence 9999999999999999987653
No 60
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.79 E-value=4.8e-20 Score=166.46 Aligned_cols=148 Identities=9% Similarity=-0.026 Sum_probs=109.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----------------------------CCC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL----------------------------ADK 209 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----------------------------~~~ 209 (371)
++.+|||||||+|.++..++.....+|+|+|+|+.|++.|+++++.... ..+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 4789999999999887776665223799999999999999987654310 012
Q ss_pred eE-EEEcCCCCC-CC---CCCccceEEccccccCc----CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHH
Q 017428 210 VS-FQVGDALQQ-PF---PDGQFDLVWSMESGEHM----PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWE 280 (371)
Q Consensus 210 v~-~~~~d~~~~-~~---~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 280 (371)
+. ++++|+.+. |+ ..++||+|++..+++|+ ++...++++++++|||||.|++.......... .
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~----~---- 206 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM----V---- 206 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE----E----
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce----e----
Confidence 43 889999874 43 25789999999999986 34578999999999999999998754321100 0
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecC
Q 017428 281 QELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
....+. ...++.+++.++|+++||+++++..+.
T Consensus 207 ------g~~~~~-~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 207 ------GKREFS-CVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp ------TTEEEE-CCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred ------CCeEee-ccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 000111 124689999999999999999988765
No 61
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.79 E-value=1.1e-18 Score=155.29 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=93.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccc-cc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~l 236 (371)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++.+.++|+.+.+++ ++||+|++.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCccc
Confidence 3789999999999999999887 78999999999999999999887764 799999999988876 8899999998 99
Q ss_pred cCc---CCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 237 EHM---PDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 237 ~~~---~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+ .+...+++++.++|||||.+++...
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999 5678999999999999999998553
No 62
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.79 E-value=1.9e-18 Score=148.68 Aligned_cols=139 Identities=22% Similarity=0.338 Sum_probs=115.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++.+..+|+.+.++ +++||+|++..+++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 779999999999999999987 78999999999999999999988876 469999999998877 789999999999999
Q ss_pred cC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEE
Q 017428 239 MP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 239 ~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 316 (371)
++ +...+++++.++|||||.+++.+.......+. .......++.+++.++|++ |++++.
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC-----------------TVGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-----------------CSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC-----------------CCCCCCccCHHHHHHHhcC--CeEEEe
Confidence 97 78999999999999999998877543322110 0111224688999999987 998887
Q ss_pred Eec
Q 017428 317 EDW 319 (371)
Q Consensus 317 ~~~ 319 (371)
...
T Consensus 171 ~~~ 173 (199)
T 2xvm_A 171 NED 173 (199)
T ss_dssp ECC
T ss_pred ccc
Confidence 644
No 63
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=3.3e-18 Score=162.21 Aligned_cols=165 Identities=23% Similarity=0.236 Sum_probs=124.0
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (371)
..++..+.+. ++.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+ +
T Consensus 172 ~~~~~~~~~~-----~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 244 (374)
T 1qzz_A 172 EAPADAYDWS-----AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P 244 (374)
T ss_dssp HHHHHTSCCT-----TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C
T ss_pred HHHHHhCCCC-----CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c
Confidence 3445555444 37899999999999999999987 679999999 99999999999988887799999999976 4
Q ss_pred CCCCccceEEccccccCcCCHH--HHHHHHHHhcCCCcEEEEEec--cCCCCCcCccccChHHHHHHHHHhhccCCCCCC
Q 017428 222 FPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTW--CHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (371)
++. .||+|++..+++|+++.. .++++++++|||||++++.+. ..+... . ......+............+
T Consensus 245 ~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~ 317 (374)
T 1qzz_A 245 LPV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGA--D----RFFSTLLDLRMLTFMGGRVR 317 (374)
T ss_dssp CSC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------------HHHHHHHHHHHHHHHSCCCC
T ss_pred CCC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCC--C----cchhhhcchHHHHhCCCcCC
Confidence 443 499999999999998764 899999999999999999987 432211 0 11111111110000011357
Q ss_pred CHHHHHHHHHhCCCceEEEEecCC
Q 017428 298 STADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 298 ~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
+.++|.++|+++||+++++.....
T Consensus 318 ~~~~~~~ll~~aGf~~~~~~~~~~ 341 (374)
T 1qzz_A 318 TRDEVVDLAGSAGLALASERTSGS 341 (374)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEECC
T ss_pred CHHHHHHHHHHCCCceEEEEECCC
Confidence 999999999999999998877643
No 64
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=1.1e-18 Score=156.21 Aligned_cols=143 Identities=13% Similarity=0.195 Sum_probs=112.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH----------c------CCCCCeEEEEcCCCCCC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAA----------R------GLADKVSFQVGDALQQP 221 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~----------~------~~~~~v~~~~~d~~~~~ 221 (371)
++.+|||+|||+|..+..|++. |.+|+|||+|+.|++.|+++... . ....+++++++|+.+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 3789999999999999999987 88999999999999999876531 0 01257999999999987
Q ss_pred CCC-CccceEEccccccCcC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCC
Q 017428 222 FPD-GQFDLVWSMESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 222 ~~~-~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
+++ ++||+|++..++++++ +...+++++.++|||||++++..+...... ..+.+...+
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~-------------------~~g~~~~~~ 207 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK-------------------HAGPPFYVP 207 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-------------------CCCSSCCCC
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-------------------CCCCCCCCC
Confidence 654 8999999999999985 457899999999999999987665432110 001111368
Q ss_pred HHHHHHHHHhCCCceEEEEecCC
Q 017428 299 TADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
++++.+++.. +|+++..+.+..
T Consensus 208 ~~el~~~l~~-~f~v~~~~~~~~ 229 (252)
T 2gb4_A 208 SAELKRLFGT-KCSMQCLEEVDA 229 (252)
T ss_dssp HHHHHHHHTT-TEEEEEEEEEEC
T ss_pred HHHHHHHhhC-CeEEEEEecccc
Confidence 9999999988 599888775443
No 65
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=8.6e-19 Score=154.19 Aligned_cols=104 Identities=31% Similarity=0.457 Sum_probs=93.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccc--c
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES--G 236 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~--l 236 (371)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .+++++.+|+.+.++++++||+|++..+ +
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 689999999999999999887 5699999999999999999988776 5899999999998877889999999998 6
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
++..+...+++++.++|+|||.+++.+..
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 66667889999999999999999998754
No 66
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.78 E-value=3.5e-18 Score=150.35 Aligned_cols=146 Identities=18% Similarity=0.249 Sum_probs=116.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CCCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QPFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~v~~~~~ 235 (371)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ..+..+|+.+ .++++++||+|++..+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 4789999999999999999988 789999999999999988642 4788999887 5677789999999999
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccC----------CCCCCCHHHHHHH
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY----------LPAWCSTADYVKL 305 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l 305 (371)
++|++++..+++++.++|+|||.+++........ ..........+. ...+++.+++.++
T Consensus 103 l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 103 LEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI-----------SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp GGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH-----------HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH-----------HHHHHHhcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 9999999999999999999999999987543211 011111111111 1135799999999
Q ss_pred HHhCCCceEEEEecCCcc
Q 017428 306 LQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 306 l~~aGF~~v~~~~~~~~~ 323 (371)
|+++||+++++.......
T Consensus 172 l~~~Gf~~~~~~~~~~~~ 189 (230)
T 3cc8_A 172 FLKAGYSISKVDRVYVDH 189 (230)
T ss_dssp HHHTTEEEEEEEEEECCC
T ss_pred HHHcCCeEEEEEecccCh
Confidence 999999999988766554
No 67
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.78 E-value=3e-19 Score=163.71 Aligned_cols=152 Identities=14% Similarity=0.252 Sum_probs=111.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC-------------------------------
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG------------------------------- 205 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~------------------------------- 205 (371)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 37899999999999999999987 6899999999999999999866543
Q ss_pred --------------------------CCCCeEEEEcCCCCCC-----CCCCccceEEccccccCcC------CHHHHHHH
Q 017428 206 --------------------------LADKVSFQVGDALQQP-----FPDGQFDLVWSMESGEHMP------DKSKFVSE 248 (371)
Q Consensus 206 --------------------------~~~~v~~~~~d~~~~~-----~~~~~fD~v~~~~~l~~~~------~~~~~l~~ 248 (371)
.+.++.|.++|+...+ +..++||+|++..+++|+. +...++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 2258999999998654 4678999999999997775 67899999
Q ss_pred HHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHh--CCCceEEEEe
Q 017428 249 LARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS--LSLEDIKAED 318 (371)
Q Consensus 249 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--aGF~~v~~~~ 318 (371)
++++|||||+|++.......... ...+... ... ..... .+.++++.++|.+ +||+.+++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~-~~~~~~~---~~~-~~~~~----~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGK-RKTLTET---IYK-NYYRI----QLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHT-TTTSCHH---HHH-HHHHC----CCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCchhhhh-hhcccHH---HHh-hhhcE----EEcHHHHHHHHHhcCCCceEEEEec
Confidence 99999999999996532111100 0111111 111 11111 2357899999999 9999887654
No 68
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.78 E-value=3.3e-18 Score=160.69 Aligned_cols=160 Identities=15% Similarity=0.104 Sum_probs=118.0
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
...++..+.+++ +.+|||||||+|.++..+++.+ +.+++++|++ .++. +++.+..++.++++++.+|+. .
T Consensus 173 ~~~~~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~-~ 243 (348)
T 3lst_A 173 HLILARAGDFPA-----TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL-R 243 (348)
T ss_dssp HHHHHHHSCCCS-----SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT-T
T ss_pred HHHHHHhCCccC-----CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC-C
Confidence 445666666554 7899999999999999999987 6789999994 4444 333333345578999999997 3
Q ss_pred CCCCCccceEEccccccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCC
Q 017428 221 PFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
+++ +||+|++..++||+++. ..++++++++|||||+|++.+...+.... ... ...+............++
T Consensus 244 ~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~--~~~----~~~~d~~~~~~~~~~~~t 315 (348)
T 3lst_A 244 EVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGND--AHQ----SKEMDFMMLAARTGQERT 315 (348)
T ss_dssp CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSS--CCH----HHHHHHHHHHTTSCCCCB
T ss_pred CCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cch----hhhcChhhhhcCCCcCCC
Confidence 445 89999999999999887 69999999999999999999876543311 111 111111111111123568
Q ss_pred HHHHHHHHHhCCCceEEEEe
Q 017428 299 TADYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~ 318 (371)
.++|.++|+++||+++++..
T Consensus 316 ~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 316 AAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 99999999999999999876
No 69
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.78 E-value=9.6e-19 Score=160.02 Aligned_cols=149 Identities=12% Similarity=0.039 Sum_probs=109.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-----------------CCCC------------
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-----------------GLAD------------ 208 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----------------~~~~------------ 208 (371)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++++.. +...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 37899999999999655444433679999999999999998865421 1000
Q ss_pred CeEEEEcCCCC-CCC-----CCCccceEEccccccC----cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccCh
Q 017428 209 KVSFQVGDALQ-QPF-----PDGQFDLVWSMESGEH----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQP 278 (371)
Q Consensus 209 ~v~~~~~d~~~-~~~-----~~~~fD~v~~~~~l~~----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~ 278 (371)
.+.++.+|+.+ +|+ ++++||+|+++.+++| ++++..++++++++|||||+|++.......... .
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~----~-- 224 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYL----A-- 224 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEE----E--
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEE----c--
Confidence 15677889887 553 4567999999999999 567899999999999999999998633211100 0
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 279 WEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
....+. ..+++.+++.++|+++||+++.+..+..
T Consensus 225 --------~~~~~~-~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 258 (289)
T 2g72_A 225 --------GEARLT-VVPVSEEEVREALVRSGYKVRDLRTYIM 258 (289)
T ss_dssp --------TTEEEE-CCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred --------CCeeee-eccCCHHHHHHHHHHcCCeEEEeeEeec
Confidence 000111 1257999999999999999999877664
No 70
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.78 E-value=3.3e-18 Score=147.83 Aligned_cols=145 Identities=16% Similarity=0.182 Sum_probs=115.0
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. ++.+..+|+.+.++++++||+|++.....+
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 106 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIFCHLP 106 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEECCCCC
T ss_pred C-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEhhcCC
Confidence 5 9999999999999999886 78999999999999999999888764 799999999998888889999998543222
Q ss_pred cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEe
Q 017428 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 239 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 318 (371)
..+...+++++.++|||||.+++.++........ .........+++.+++.++|+ ||+++.+..
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYN--------------TGGPKDLDLLPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGT--------------SCCSSSGGGCCCHHHHHHHCS--SSCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCC--------------CCCCCcceeecCHHHHHHHhc--CceEEEEEE
Confidence 2467899999999999999999998754332100 000001112579999999999 999999877
Q ss_pred cCCcc
Q 017428 319 WSQNV 323 (371)
Q Consensus 319 ~~~~~ 323 (371)
...+.
T Consensus 171 ~~~~~ 175 (202)
T 2kw5_A 171 LERNL 175 (202)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 66553
No 71
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.77 E-value=4.5e-18 Score=159.96 Aligned_cols=152 Identities=17% Similarity=0.170 Sum_probs=120.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSMESG 236 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~l 236 (371)
+.+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++++...++.+++++..+|+.+.+ +..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 7899999999999999999987 679999999 8899999999998888778999999998865 134669999999999
Q ss_pred cCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHh-hccCCCCCCCHHHHHHHHHhCCCce
Q 017428 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC-DAYYLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 237 ~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
||+++. ..++++++++|+|||+|++.+...+..... .....++.... ........++.++|.++|+++||++
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 333 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVT-----PALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAV 333 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSS-----SHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCC-----CchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCce
Confidence 999865 899999999999999999999765443211 11111111111 0111112468999999999999999
Q ss_pred EEE
Q 017428 314 IKA 316 (371)
Q Consensus 314 v~~ 316 (371)
++.
T Consensus 334 ~~~ 336 (352)
T 3mcz_A 334 GER 336 (352)
T ss_dssp EEE
T ss_pred eee
Confidence 884
No 72
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.77 E-value=8.7e-18 Score=156.87 Aligned_cols=163 Identities=16% Similarity=0.150 Sum_probs=124.3
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
...++..+... + .+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+
T Consensus 157 ~~~~~~~~~~~-----~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 228 (334)
T 2ip2_A 157 FHEIPRLLDFR-----G-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ- 228 (334)
T ss_dssp HHHHHHHSCCT-----T-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-
T ss_pred HHHHHHhCCCC-----C-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-
Confidence 44555555432 3 899999999999999999987 679999999 99999999998877766789999999987
Q ss_pred CCCCCccceEEccccccCcCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCC
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
+++ ++||+|++..++|++++.. .++++++++|+|||++++.+...+.... ....... ........ .+ ..++
T Consensus 229 ~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~-~~~~~~~~-~~--~~~t 301 (334)
T 2ip2_A 229 EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMSVLW-DVHLFMAC-AG--RHRT 301 (334)
T ss_dssp CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC--CHHHHHH-HHHHHHHH-SC--CCCB
T ss_pred CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhHHh-hhHhHhhC-CC--cCCC
Confidence 555 6799999999999998765 9999999999999999999876443211 1111111 11100111 11 2458
Q ss_pred HHHHHHHHHhCCCceEEEEec
Q 017428 299 TADYVKLLQSLSLEDIKAEDW 319 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~~ 319 (371)
.++|.++|+++||+++++...
T Consensus 302 ~~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 302 TEEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHCCCceeEEEEC
Confidence 999999999999999988754
No 73
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.77 E-value=2.1e-19 Score=156.10 Aligned_cols=156 Identities=21% Similarity=0.242 Sum_probs=116.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..++...+.+|+|+|+|+.+++.|++++...+ .++.+.++|+.++++++++||+|++..+++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 378999999999998554444447899999999999999999988766 478999999999888889999999999999
Q ss_pred Cc--CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCcc-ccChHHHHHHHHHhhcc-CCCCCCCHHHHHHHHHhCCCce
Q 017428 238 HM--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE-SLQPWEQELLKKICDAY-YLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 238 ~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
|+ .+...++++++++|||||++++.++.......... .+... .+....... ....+++.+++.++++++||..
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~ 177 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEG---EFLQLERGEKVIHSYVSLEEADKYFKDMKVLF 177 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETT---EEEECC-CCCEEEEEECHHHHHHTTTTSEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccc---cceeccCCCceeEEecCHHHHHHHHhhcCcee
Confidence 99 67789999999999999999999876543221100 00000 000000000 0113578999999999999987
Q ss_pred EEEEe
Q 017428 314 IKAED 318 (371)
Q Consensus 314 v~~~~ 318 (371)
.+...
T Consensus 178 ~~~~~ 182 (209)
T 2p8j_A 178 KEDRV 182 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 66543
No 74
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.76 E-value=1.4e-17 Score=157.02 Aligned_cols=164 Identities=18% Similarity=0.203 Sum_probs=125.0
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (371)
..++..+...+ +.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+ +
T Consensus 173 ~~l~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 245 (360)
T 1tw3_A 173 DAPAAAYDWTN-----VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P 245 (360)
T ss_dssp HHHHHHSCCTT-----CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C
T ss_pred HHHHHhCCCcc-----CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C
Confidence 34455555443 7899999999999999999987 679999999 99999999999988887799999999976 4
Q ss_pred CCCCccceEEccccccCcCCH--HHHHHHHHHhcCCCcEEEEEecc-CCCCCcCccccChHHHHHHHHHhhccCCCCCCC
Q 017428 222 FPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWC-HRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
++. .||+|++..+++++++. ..++++++++|+|||++++.+.. .+.... ..+.... ........ + ...++
T Consensus 246 ~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~~~~~~~-~~~~~~~~--~-~~~~t 318 (360)
T 1tw3_A 246 LPR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSF--NEQFTEL-DLRMLVFL--G-GALRT 318 (360)
T ss_dssp CSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCC--SHHHHHH-HHHHHHHH--S-CCCCB
T ss_pred CCC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCC--cchhhhc-cHHHhhhc--C-CcCCC
Confidence 443 49999999999999876 58999999999999999999865 322110 0111111 11100111 1 13569
Q ss_pred HHHHHHHHHhCCCceEEEEecC
Q 017428 299 TADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 299 ~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
.++|.++|+++||+++++....
T Consensus 319 ~~e~~~ll~~aGf~~~~~~~~~ 340 (360)
T 1tw3_A 319 REKWDGLAASAGLVVEEVRQLP 340 (360)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEeCC
Confidence 9999999999999999887654
No 75
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=4.3e-18 Score=151.73 Aligned_cols=159 Identities=13% Similarity=0.137 Sum_probs=118.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-----CccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD-----GQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~fD~v~~ 232 (371)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..++.++++|+.+.+... ..||+|++
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEEEE
Confidence 4789999999999999999997 4599999999999999998762 247999999998864321 34999999
Q ss_pred cccccCcC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHH------HHHHHHhhccCCCCCCCHHHHHH
Q 017428 233 MESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQ------ELLKKICDAYYLPAWCSTADYVK 304 (371)
Q Consensus 233 ~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 304 (371)
..+++|++ +...++++++++|||||++++.++...... .+..... ..+.........+..++.+++.+
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCID----FFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIEL 206 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHH----HHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHH
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccH----HHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHH
Confidence 99999998 789999999999999999999987543210 0000000 00111112222334578999999
Q ss_pred HHHhCCCceEEEEecCCcccCcc
Q 017428 305 LLQSLSLEDIKAEDWSQNVAPFW 327 (371)
Q Consensus 305 ll~~aGF~~v~~~~~~~~~~~~~ 327 (371)
++ +||+++...........|+
T Consensus 207 ~~--aGf~~~~~~~~~~~~~~~~ 227 (245)
T 3ggd_A 207 YF--PDFEILSQGEGLFQSIHKL 227 (245)
T ss_dssp HC--TTEEEEEEECCBCCCSCBC
T ss_pred Hh--CCCEEEeccccccceeeec
Confidence 99 9999999877665544444
No 76
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.76 E-value=1.1e-17 Score=148.17 Aligned_cols=101 Identities=22% Similarity=0.383 Sum_probs=88.1
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEc-ccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS-MESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~-~~~l~ 237 (371)
+.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++. +++.+..+|+.+.++ +++||+|++ ..+++
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~ 112 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVG 112 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-SSCEEEEEECTTGGG
T ss_pred CCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-CCCCcEEEEcCchHh
Confidence 7899999999999999999884 59999999999999998863 468999999998876 688999995 55999
Q ss_pred CcC---CHHHHHHHHHHhcCCCcEEEEEeccCC
Q 017428 238 HMP---DKSKFVSELARVTAPAGTIIIVTWCHR 267 (371)
Q Consensus 238 ~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~ 267 (371)
|+. +...++++++++|||||.+++.++...
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 113 YLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp GCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 985 457899999999999999999876543
No 77
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.76 E-value=9.4e-18 Score=149.07 Aligned_cols=100 Identities=24% Similarity=0.351 Sum_probs=89.3
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccc-ccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 237 (371)
+.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++....+ .++.+..+|+.+.+++ ++||+|++.. +++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 689999999999999999886 799999999999999999988766 4799999999988765 8899999986 999
Q ss_pred Cc---CCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 238 HM---PDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 238 ~~---~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|+ .+...+++++.++|+|||.+++..
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 98 455789999999999999999854
No 78
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.76 E-value=9.4e-18 Score=153.57 Aligned_cols=105 Identities=25% Similarity=0.304 Sum_probs=93.2
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCeEEEEcCCCCCC---CCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA---DKVSFQVGDALQQP---FPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~---~~~~~fD~v~~ 232 (371)
+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.. .++.+..+|+.+++ +++++||+|++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEE
Confidence 789999999999999999987 789999999999999999876443321 36889999998876 77899999999
Q ss_pred c-ccccCcCC-------HHHHHHHHHHhcCCCcEEEEEec
Q 017428 233 M-ESGEHMPD-------KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 233 ~-~~l~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
. .+++|+++ +..++++++++|||||++++...
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 8 89999999 89999999999999999999764
No 79
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.75 E-value=3.7e-17 Score=154.58 Aligned_cols=151 Identities=17% Similarity=0.190 Sum_probs=112.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++. ++++++.+|+.+ +++.+ |+|++..++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~--D~v~~~~vl 271 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPKG--DAIFIKWIC 271 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC--SEEEEESCG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCCC--CEEEEechh
Confidence 47899999999999999999988 679999999 8888776531 589999999987 66644 999999999
Q ss_pred cCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHhCCCce
Q 017428 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA-YYLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 237 ~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
|++++. ..++++++++|||||+|++.+...+...... ........+...... ......++.++|.++|+++||++
T Consensus 272 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~ 349 (368)
T 3reo_A 272 HDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPS--IATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRG 349 (368)
T ss_dssp GGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCC--HHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc--hhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCee
Confidence 999765 4889999999999999999997654322111 001111111111110 11112468999999999999999
Q ss_pred EEEEecCC
Q 017428 314 IKAEDWSQ 321 (371)
Q Consensus 314 v~~~~~~~ 321 (371)
+++.....
T Consensus 350 v~~~~~~~ 357 (368)
T 3reo_A 350 FKVASCAF 357 (368)
T ss_dssp EEEEEEET
T ss_pred eEEEEeCC
Confidence 98876543
No 80
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.75 E-value=5.2e-17 Score=153.30 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=118.8
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~-~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
....++..+. .. +..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++. ++++|+.+|+.
T Consensus 188 ~~~~~~~~~~~~~-----~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~ 254 (364)
T 3p9c_A 188 ITKKLLELYHGFE-----GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMF 254 (364)
T ss_dssp HHHHHHHHCCTTT-----TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTT
T ss_pred HHHHHHHhccccc-----CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcC
Confidence 3455666554 33 37899999999999999999988 679999999 8888776531 58999999998
Q ss_pred CCCCCCCccceEEccccccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhh-ccCCCC
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD-AYYLPA 295 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 295 (371)
+ +++.+ |+|++..++|++++. ..++++++++|||||+|++.+...+...... ........+..... ......
T Consensus 255 ~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~d~~m~~~~~~g~ 329 (364)
T 3p9c_A 255 K-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEAN--PSSQGVFHVDMIMLAHNPGGR 329 (364)
T ss_dssp T-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSS--HHHHHHHHHHHHHHHHCSSCC
T ss_pred C-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcc--hhhhhHHHhHHHHHhcccCCc
Confidence 8 66654 999999999999654 6899999999999999999997654322111 00000011111111 011112
Q ss_pred CCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 296 WCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 296 ~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
.++.++|.++|+++||+++++.....
T Consensus 330 ~rt~~e~~~ll~~AGF~~v~~~~~~~ 355 (364)
T 3p9c_A 330 ERYEREFQALARGAGFTGVKSTYIYA 355 (364)
T ss_dssp CCBHHHHHHHHHHTTCCEEEEEEEET
T ss_pred cCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 46899999999999999999876543
No 81
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.75 E-value=8.8e-17 Score=139.22 Aligned_cols=135 Identities=13% Similarity=0.053 Sum_probs=111.2
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (371)
..++..+.+.+ +.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++++..++ ++++++.+|+.+..
T Consensus 30 ~~~l~~l~~~~-----~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 30 AVTLSKLRLQD-----DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGL 103 (204)
T ss_dssp HHHHHHTTCCT-----TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTC
T ss_pred HHHHHHcCCCC-----CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhh
Confidence 44556666554 8899999999999999999986 48999999999999999999998887 68999999997654
Q ss_pred CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHH
Q 017428 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (371)
...++||+|++...++ +...+++++.++|||||++++..... .+.++
T Consensus 104 ~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------------~~~~~ 150 (204)
T 3e05_A 104 DDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL------------------------------DTLTK 150 (204)
T ss_dssp TTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH------------------------------HHHHH
T ss_pred hcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc------------------------------ccHHH
Confidence 3347899999987765 78899999999999999999976321 13567
Q ss_pred HHHHHHhCCCceEEEE
Q 017428 302 YVKLLQSLSLEDIKAE 317 (371)
Q Consensus 302 ~~~ll~~aGF~~v~~~ 317 (371)
+.++++++|| .+++.
T Consensus 151 ~~~~l~~~g~-~~~~~ 165 (204)
T 3e05_A 151 AVEFLEDHGY-MVEVA 165 (204)
T ss_dssp HHHHHHHTTC-EEEEE
T ss_pred HHHHHHHCCC-ceeEE
Confidence 8889999999 55443
No 82
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.75 E-value=4.5e-19 Score=157.43 Aligned_cols=104 Identities=20% Similarity=0.166 Sum_probs=89.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEc---
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWS--- 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v~~--- 232 (371)
++.+|||||||+|..+..+++..+.+|+|||+|+.+++.|+++....+ .++.++.+|+.+. ++++++||.|+.
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEeee
Confidence 488999999999999999988656789999999999999999987765 4788999997654 467889999874
Q ss_pred --cccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 233 --MESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 233 --~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
...++|+.+...++++++|+|||||+|++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5667788889999999999999999998754
No 83
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.75 E-value=7.9e-18 Score=151.55 Aligned_cols=149 Identities=11% Similarity=0.031 Sum_probs=114.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCC----------------------------CC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGL----------------------------AD 208 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~----------------------------~~ 208 (371)
++.+|||||||+|.++..++.. +. +|+|+|+|+.+++.+++++...+. ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4789999999999999988876 44 899999999999999988754320 00
Q ss_pred Ce-EEEEcCCCCCC-CCC---CccceEEcccccc----CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChH
Q 017428 209 KV-SFQVGDALQQP-FPD---GQFDLVWSMESGE----HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPW 279 (371)
Q Consensus 209 ~v-~~~~~d~~~~~-~~~---~~fD~v~~~~~l~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 279 (371)
++ .+.++|+.+.+ +++ ++||+|++..+++ +++++..+++++.++|||||+|++.+........ .
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~----~--- 207 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYM----I--- 207 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE----E---
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEE----c---
Confidence 27 89999998864 355 8899999999999 6667889999999999999999998854321100 0
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecCCc
Q 017428 280 EQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (371)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~ 322 (371)
.........++.+++.++|+++||+++++......
T Consensus 208 --------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~ 242 (265)
T 2i62_A 208 --------GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQN 242 (265)
T ss_dssp --------TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCC
T ss_pred --------CCccccccccCHHHHHHHHHHCCCEEEEEEEeccc
Confidence 00010112468999999999999999998876543
No 84
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.74 E-value=9e-18 Score=151.17 Aligned_cols=152 Identities=21% Similarity=0.237 Sum_probs=109.7
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. .+ +.++|+.++++++++||+|++..++.|
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~ 126 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGAFEAVLALGDVLS 126 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred CCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCCEEEEEEcchhhh
Confidence 789999999999999999987 7899999999999999988742 12 889999998888899999999887766
Q ss_pred c-CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcC---ccccChHHHHHHHHHhhc-cC-----CCCCCCHHHHHHHHHh
Q 017428 239 M-PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPS---EESLQPWEQELLKKICDA-YY-----LPAWCSTADYVKLLQS 308 (371)
Q Consensus 239 ~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~ll~~ 308 (371)
+ +++..+++++.++|||||.+++...+....... ...+ ......+...... .. ...+++++++.++
T Consensus 127 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--- 202 (260)
T 2avn_A 127 YVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAW-DQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL--- 202 (260)
T ss_dssp HCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCH-HHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---
T ss_pred ccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhH-HHHHHHHhccccccCCCceeEEEeccCHHHHHHh---
Confidence 6 789999999999999999999987542100000 0000 0000111110000 00 0125688888887
Q ss_pred CCCceEEEEecCCc
Q 017428 309 LSLEDIKAEDWSQN 322 (371)
Q Consensus 309 aGF~~v~~~~~~~~ 322 (371)
+||+++++......
T Consensus 203 aGf~~~~~~~~~~~ 216 (260)
T 2avn_A 203 EGFETVDIRGIGVM 216 (260)
T ss_dssp TTEEEEEEEEECSS
T ss_pred cCceEEEEECCCCc
Confidence 99999988765543
No 85
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.74 E-value=9.1e-17 Score=139.27 Aligned_cols=134 Identities=16% Similarity=0.076 Sum_probs=109.1
Q ss_pred HHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 017428 144 ETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP 223 (371)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 223 (371)
.++..+.+.+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..+++.+++++.+|+.+....
T Consensus 46 ~~l~~l~~~~-----~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 46 LTLAALAPRR-----GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD 119 (204)
T ss_dssp HHHHHHCCCT-----TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT
T ss_pred HHHHhcCCCC-----CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc
Confidence 3455555554 889999999999999999998 8899999999999999999999999876899999999884223
Q ss_pred CCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHH
Q 017428 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV 303 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (371)
...||+|++...+ +.. +++++.++|||||++++..... .+..++.
T Consensus 120 ~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~------------------------------~~~~~~~ 164 (204)
T 3njr_A 120 LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL------------------------------ESETLLT 164 (204)
T ss_dssp SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH------------------------------HHHHHHH
T ss_pred CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc------------------------------ccHHHHH
Confidence 4679999987644 566 9999999999999999976321 1355677
Q ss_pred HHHHhCCCceEEEEe
Q 017428 304 KLLQSLSLEDIKAED 318 (371)
Q Consensus 304 ~ll~~aGF~~v~~~~ 318 (371)
+++++.||+++.+..
T Consensus 165 ~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 165 QLHARHGGQLLRIDI 179 (204)
T ss_dssp HHHHHHCSEEEEEEE
T ss_pred HHHHhCCCcEEEEEe
Confidence 889999998777643
No 86
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.74 E-value=9.4e-17 Score=145.52 Aligned_cols=162 Identities=10% Similarity=0.104 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCc---ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEE
Q 017428 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI---GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSF 212 (371)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~Gt---G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~ 212 (371)
..+.++.+++..+.... +..+|||||||+ |.++..+++.. +.+|+++|+|+.|++.|++++.. .+++++
T Consensus 60 ~~~~~~~~~~~~l~~~~----~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~ 132 (274)
T 2qe6_A 60 ENRKVLVRGVRFLAGEA----GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAV 132 (274)
T ss_dssp HHHHHHHHHHHHHHTTT----CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEE
T ss_pred HHhHHHHHHHHHHhhcc----CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEE
Confidence 34455566665543221 257999999999 99887776665 68999999999999999998743 257999
Q ss_pred EEcCCCCCC-----------CCCCccceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChH
Q 017428 213 QVGDALQQP-----------FPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPW 279 (371)
Q Consensus 213 ~~~d~~~~~-----------~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 279 (371)
+++|+.+.+ ++.++||+|++..++||+++ ...++++++++|+|||+|++.++..+. + .....
T Consensus 133 ~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~--~~~~~- 207 (274)
T 2qe6_A 133 FTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--L--PAQQK- 207 (274)
T ss_dssp EECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--C--HHHHH-
T ss_pred EEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--h--HHHHH-
Confidence 999997631 23358999999999999987 899999999999999999999976532 1 11111
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEE
Q 017428 280 EQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (371)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~ 315 (371)
....+..... . ..+++.+++.++| .||++++
T Consensus 208 ~~~~~~~~~~--~-~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 208 LARITRENLG--E-GWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HHHHHHHHHS--C-CCCBCHHHHHHTT--TTCEECT
T ss_pred HHHHHHhcCC--C-CccCCHHHHHHHh--CCCeEcc
Confidence 1122222111 1 1357999999999 5998765
No 87
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.73 E-value=4.9e-17 Score=145.45 Aligned_cols=117 Identities=27% Similarity=0.386 Sum_probs=96.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
...+..++...... ++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+. ++.++++|+.
T Consensus 27 ~~~~~~~~~~~~~~-----~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~ 98 (252)
T 1wzn_A 27 IDFVEEIFKEDAKR-----EVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVL 98 (252)
T ss_dssp HHHHHHHHHHTCSS-----CCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGG
T ss_pred HHHHHHHHHHhccc-----CCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChh
Confidence 34566666665443 3789999999999999999987 78999999999999999999987764 7999999999
Q ss_pred CCCCCCCccceEEccc-cccCcC--CHHHHHHHHHHhcCCCcEEEEEec
Q 017428 219 QQPFPDGQFDLVWSME-SGEHMP--DKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~-~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+++++ ++||+|++.. .++++. +...+++++.++|+|||.+++...
T Consensus 99 ~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 99 EIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp GCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 88764 7899999864 444443 567899999999999999987543
No 88
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.73 E-value=7.1e-17 Score=151.74 Aligned_cols=164 Identities=18% Similarity=0.224 Sum_probs=121.0
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (371)
..++....... ..+|||||||+|.++..+++++ +.+++..|+ |.+++.|++++...+ .++|+++.+|+.+.+
T Consensus 169 ~~~~~~~~~~~-----~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~ 241 (353)
T 4a6d_A 169 RSVLTAFDLSV-----FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP 241 (353)
T ss_dssp HHHHHSSCGGG-----CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSC
T ss_pred HHHHHhcCccc-----CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCC
Confidence 34444444443 6899999999999999999998 778999998 889999998876544 479999999998766
Q ss_pred CCCCccceEEccccccCcCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCH
Q 017428 222 FPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (371)
.+ .+|+|++..+||+++|. ..+|+++++.|+|||+|+|.+...+..... ......+.-..-......-.|.
T Consensus 242 ~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~-----~~~~~~~dl~ml~~~~g~ert~ 314 (353)
T 4a6d_A 242 LP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRG-----PLLTQLYSLNMLVQTEGQERTP 314 (353)
T ss_dssp CC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCC-----CHHHHHHHHHHHHSSSCCCCCH
T ss_pred CC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCC-----CHHHHHHHHHHHHhCCCcCCCH
Confidence 44 47999999999999876 578999999999999999999765432211 1111111111000111123689
Q ss_pred HHHHHHHHhCCCceEEEEecC
Q 017428 300 ADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 300 ~~~~~ll~~aGF~~v~~~~~~ 320 (371)
++|+++|+++||+++++....
T Consensus 315 ~e~~~ll~~AGf~~v~v~~~~ 335 (353)
T 4a6d_A 315 THYHMLLSSAGFRDFQFKKTG 335 (353)
T ss_dssp HHHHHHHHHHTCEEEEEECCS
T ss_pred HHHHHHHHHCCCceEEEEEcC
Confidence 999999999999999887543
No 89
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.73 E-value=5.3e-17 Score=138.85 Aligned_cols=126 Identities=23% Similarity=0.368 Sum_probs=108.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcc-ccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM-ESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~-~~l 236 (371)
++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++. .++.+...|+.+.++++++||+|++. .++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~ 118 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGNVM 118 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCCCG
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCcHH
Confidence 3789999999999999999987 789999999999999998864 36899999999888778899999998 788
Q ss_pred cCcC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceE
Q 017428 237 EHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (371)
Q Consensus 237 ~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 314 (371)
+|+. +...+++++.++|+|||.+++...... .++.+++.++++++||+++
T Consensus 119 ~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 119 GFLAEDGREPALANIHRALGADGRAVIGFGAGR----------------------------GWVFGDFLEVAERVGLELE 170 (195)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS----------------------------SCCHHHHHHHHHHHTEEEE
T ss_pred hhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC----------------------------CcCHHHHHHHHHHcCCEEe
Confidence 8874 458899999999999999999763211 2478899999999999988
Q ss_pred EEEe
Q 017428 315 KAED 318 (371)
Q Consensus 315 ~~~~ 318 (371)
+...
T Consensus 171 ~~~~ 174 (195)
T 3cgg_A 171 NAFE 174 (195)
T ss_dssp EEES
T ss_pred eeec
Confidence 7754
No 90
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.73 E-value=3e-17 Score=150.77 Aligned_cols=165 Identities=12% Similarity=0.081 Sum_probs=112.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-----CeEEEEcCCCC------C--CCCC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-----KVSFQVGDALQ------Q--PFPD 224 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-----~v~~~~~d~~~------~--~~~~ 224 (371)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+... ++.|.+.|+.. + ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 478999999999987766665435799999999999999999987665321 26788888832 2 2467
Q ss_pred CccceEEccccccCc---CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCcc-----ccC-----h-HH------H-HH
Q 017428 225 GQFDLVWSMESGEHM---PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE-----SLQ-----P-WE------Q-EL 283 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-----~~~-----~-~~------~-~~ 283 (371)
++||+|+|..++|++ .+...++++++++|||||++++...+......... ... . +. . .+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRI 207 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccc
Confidence 899999999999875 45689999999999999999998753211110000 000 0 00 0 00
Q ss_pred --HHHHhhccCCC-CCCCHHHHHHHHHhCCCceEEEEecCCc
Q 017428 284 --LKKICDAYYLP-AWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (371)
Q Consensus 284 --~~~~~~~~~~~-~~~~~~~~~~ll~~aGF~~v~~~~~~~~ 322 (371)
+.........+ .+.+++++.++++++||+.++...+...
T Consensus 208 ~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~~~ 249 (302)
T 2vdw_A 208 VVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFATI 249 (302)
T ss_dssp EEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHHHH
T ss_pred ceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChHHH
Confidence 00000001111 2467899999999999999998766543
No 91
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=4.7e-17 Score=148.49 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=112.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ ++.+..+|+.+.++ +++||+|++..+++|
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccchhh
Confidence 789999999999999999987 78999999999999999999998876 79999999998876 789999999999999
Q ss_pred cCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEE
Q 017428 239 MPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 239 ~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 316 (371)
+++ ...+++++.++|+|||.+++.........+. .......++.+++.+++.. |+++..
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC-----------------PLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-----------------SSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC-----------------CCCccccCCHHHHHHHhcC--CEEEEE
Confidence 954 5799999999999999988876543322111 0111124678889888865 888877
Q ss_pred Ee
Q 017428 317 ED 318 (371)
Q Consensus 317 ~~ 318 (371)
..
T Consensus 258 ~~ 259 (286)
T 3m70_A 258 NE 259 (286)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 92
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.72 E-value=2.5e-17 Score=143.78 Aligned_cols=102 Identities=22% Similarity=0.305 Sum_probs=92.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... ++++++++|+.+.+ ++++||+|++..+++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 3789999999999999999887 579999999999999999987653 37999999999987 678999999999999
Q ss_pred CcCCH---HHHHHHHHHhcCCCcEEEEEec
Q 017428 238 HMPDK---SKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 238 ~~~~~---~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|++++ ..+++++.++|||||.+++...
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99987 5779999999999999999774
No 93
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.72 E-value=6.6e-17 Score=136.54 Aligned_cols=136 Identities=12% Similarity=0.060 Sum_probs=108.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
+...++..+...+ +.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+++.++ ++.+|..+
T Consensus 13 ~~~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 13 VRALAISALAPKP-----HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHCCCT-----TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred HHHHHHHHhcccC-----CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 3345555555544 7899999999999999999987 679999999999999999999988887689 88888755
Q ss_pred CCCCC--CccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCC
Q 017428 220 QPFPD--GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (371)
Q Consensus 220 ~~~~~--~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (371)
.++. ++||+|++..++++ ..+++++.++|||||++++..... .
T Consensus 87 -~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~ 131 (178)
T 3hm2_A 87 -AFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV------------------------------E 131 (178)
T ss_dssp -GGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH------------------------------H
T ss_pred -hhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc------------------------------c
Confidence 3333 88999999998887 678999999999999999976421 0
Q ss_pred CHHHHHHHHHhCCCceEEEE
Q 017428 298 STADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 298 ~~~~~~~ll~~aGF~~v~~~ 317 (371)
+...+.+++++.|++...+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 132 SEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp HHHHHHHHHHHHCCEEEEEE
T ss_pred cHHHHHHHHHHcCCeeEEEE
Confidence 24456678888888766543
No 94
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=3.8e-18 Score=151.40 Aligned_cols=105 Identities=19% Similarity=0.135 Sum_probs=87.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEc-cc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWS-ME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v~~-~~ 234 (371)
++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++.+..+ .++.++++|+.++ ++++++||+|++ .+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 378999999999999999977534489999999999999999887665 5799999999887 788899999998 55
Q ss_pred cc----cCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 235 SG----EHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 235 ~l----~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.+ .+..+...++++++++|||||++++.+.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 43 1222345789999999999999998764
No 95
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.72 E-value=6.5e-17 Score=153.23 Aligned_cols=158 Identities=19% Similarity=0.229 Sum_probs=117.3
Q ss_pred HHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 142 IEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 142 ~~~~l~~~~-~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
...++..+. +. +..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++ . ++++++.+|+.+
T Consensus 197 ~~~l~~~~~~~~-----~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~ 263 (372)
T 1fp1_D 197 MKRMLEIYTGFE-----GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA 263 (372)
T ss_dssp HHHHHHHCCTTT-----TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT
T ss_pred HHHHHHHhhccC-----CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc
Confidence 455666654 33 37899999999999999999987 678999999 999887764 2 479999999987
Q ss_pred CCCCCCccceEEccccccCcCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHH--hhccCCCC
Q 017428 220 QPFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI--CDAYYLPA 295 (371)
Q Consensus 220 ~~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 295 (371)
+++. ||+|++..++||+++.. .++++++++|||||+|++.+...+..... .........+... ....+ .
T Consensus 264 -~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~--~ 336 (372)
T 1fp1_D 264 -SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNT--SEESKLVSTLDNLMFITVGG--R 336 (372)
T ss_dssp -CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCS--SHHHHHHHHHHHHHHHHHSC--C
T ss_pred -CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCcc--chHHHHHHHhhHHHHhccCC--c
Confidence 6654 99999999999999887 99999999999999999998764432211 0000001111110 01111 2
Q ss_pred CCCHHHHHHHHHhCCCceEEEEec
Q 017428 296 WCSTADYVKLLQSLSLEDIKAEDW 319 (371)
Q Consensus 296 ~~~~~~~~~ll~~aGF~~v~~~~~ 319 (371)
.++.++|.++|+++||+++++...
T Consensus 337 ~~t~~e~~~ll~~aGf~~~~~~~~ 360 (372)
T 1fp1_D 337 ERTEKQYEKLSKLSGFSKFQVACR 360 (372)
T ss_dssp CEEHHHHHHHHHHTTCSEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCceEEEEEc
Confidence 458999999999999999988763
No 96
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.71 E-value=2.2e-17 Score=144.09 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=96.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+ ..+|+|+|+|+. ++.+.++|+.++++++++||+|++..+++
T Consensus 67 ~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI----RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM 126 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC----CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCC
T ss_pred CCCeEEEECCcCCHHHHHh----hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhcc
Confidence 3789999999999998777 368999999985 46789999999888889999999999997
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
+ .++..+++++.++|+|||.+++.++... +.+.+++.++|+++||+++...
T Consensus 127 ~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 127 G-TNIRDFLEEANRVLKPGGLLKVAEVSSR----------------------------FEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp S-SCHHHHHHHHHHHEEEEEEEEEEECGGG----------------------------CSCHHHHHHHHHHTTEEEEEEE
T ss_pred c-cCHHHHHHHHHHhCCCCeEEEEEEcCCC----------------------------CCCHHHHHHHHHHCCCEEEEEe
Confidence 5 8999999999999999999999874310 2278999999999999988865
Q ss_pred ec
Q 017428 318 DW 319 (371)
Q Consensus 318 ~~ 319 (371)
..
T Consensus 178 ~~ 179 (215)
T 2zfu_A 178 LT 179 (215)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 97
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.69 E-value=4.3e-16 Score=135.98 Aligned_cols=104 Identities=21% Similarity=0.233 Sum_probs=90.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~~~~ 235 (371)
+.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ +++.++.+|+.+++ +++++||+|+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 6899999999999999999987 67999999999999999999998887 68999999998876 67789999998865
Q ss_pred ccCcC--------CHHHHHHHHHHhcCCCcEEEEEe
Q 017428 236 GEHMP--------DKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 236 l~~~~--------~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
..+.. ....+++++.++|+|||.+++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 43322 12579999999999999999865
No 98
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.69 E-value=1.7e-16 Score=137.42 Aligned_cols=126 Identities=21% Similarity=0.163 Sum_probs=106.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++. ++.+..+|+.+.. +++||+|++...++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~--~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADV--DGKFDLIVANILAE 136 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTC--CSCEEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccC--CCCceEEEECCcHH
Confidence 37899999999999999988753459999999999999999999988875 4999999997753 58999999987765
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
+ ...+++++.++|+|||++++.++... +.+++.++++++||+.+++.
T Consensus 137 ~---~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 137 I---LLDLIPQLDSHLNEDGQVIFSGIDYL------------------------------QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp H---HHHHGGGSGGGEEEEEEEEEEEEEGG------------------------------GHHHHHHHHHHTTEEEEEEE
T ss_pred H---HHHHHHHHHHhcCCCCEEEEEecCcc------------------------------cHHHHHHHHHHcCCceEEee
Confidence 4 47889999999999999999764311 46778899999999998876
Q ss_pred ec
Q 017428 318 DW 319 (371)
Q Consensus 318 ~~ 319 (371)
..
T Consensus 184 ~~ 185 (205)
T 3grz_A 184 RA 185 (205)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 99
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.69 E-value=2e-16 Score=148.69 Aligned_cols=146 Identities=16% Similarity=0.249 Sum_probs=111.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++ . ++++++.+|+.+ +++ .||+|++..++|
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~p--~~D~v~~~~~lh 257 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT-SIP--NADAVLLKYILH 257 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT-CCC--CCSEEEEESCGG
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC-CCC--CccEEEeehhhc
Confidence 6899999999999999999987 679999999 999987764 2 469999999976 555 399999999999
Q ss_pred CcCCHH--HHHHHHHHhcCC---CcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 017428 238 HMPDKS--KFVSELARVTAP---AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (371)
Q Consensus 238 ~~~~~~--~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~ 312 (371)
|+++.. .++++++++||| ||+|++.+...+...... .. ......+........ ...++.++|.++|+++||+
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~-~~-~~~~~~~d~~~~~~~-g~~~t~~e~~~ll~~aGf~ 334 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDEN-QV-TQIKLLMDVNMACLN-GKERNEEEWKKLFIEAGFQ 334 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCH-HH-HHHHHHHHHHGGGGT-CCCEEHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCcc-ch-hhhHhhccHHHHhcc-CCCCCHHHHHHHHHHCCCC
Confidence 998876 999999999999 999999987654322110 00 011111111111111 2246899999999999999
Q ss_pred eEEEEe
Q 017428 313 DIKAED 318 (371)
Q Consensus 313 ~v~~~~ 318 (371)
++++..
T Consensus 335 ~~~~~~ 340 (352)
T 1fp2_A 335 HYKISP 340 (352)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 988765
No 100
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.68 E-value=1.8e-16 Score=135.03 Aligned_cols=106 Identities=10% Similarity=0.106 Sum_probs=87.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEccc-c
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME-S 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~-~ 235 (371)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..++ +++++++.|...++ +.+++||+|+++. .
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 3789999999999999999988 88999999999999999999998888 68999998877643 4468899998773 2
Q ss_pred ccC--------cCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 236 GEH--------MPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 236 l~~--------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+.+ ..+...+++++.++|||||.+++..+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 222 123467889999999999999998754
No 101
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=5.6e-16 Score=136.60 Aligned_cols=129 Identities=13% Similarity=0.059 Sum_probs=104.1
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~G-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v~~~~~ 235 (371)
++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|++++...++ +++++++|+... ++++++||+|+++..
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEECCC
Confidence 48999999999 99999999987678999999999999999999999886 799999997543 455689999998866
Q ss_pred ccCcCC-------------------HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCC
Q 017428 236 GEHMPD-------------------KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (371)
Q Consensus 236 l~~~~~-------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
+++..+ ...+++++.++|||||++++..... .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~ 183 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-----------------------------E 183 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-----------------------------H
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-----------------------------H
Confidence 654332 4789999999999999999974210 0
Q ss_pred CCHHHHHHHHHhCCCceEEEE
Q 017428 297 CSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 297 ~~~~~~~~ll~~aGF~~v~~~ 317 (371)
...+++.++++++||....+.
T Consensus 184 ~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 184 KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHcCCceEEEE
Confidence 135678889999999766654
No 102
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.68 E-value=8.2e-16 Score=139.60 Aligned_cols=140 Identities=15% Similarity=0.218 Sum_probs=112.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 017428 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (371)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (371)
..+++.++..+. . ++.+|||+|||+|..+..++..+ +.+|+|+|+|+.+++.|++++...+++ ++.++++|+
T Consensus 96 e~l~~~~l~~~~-~-----~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~ 168 (276)
T 2b3t_A 96 ECLVEQALARLP-E-----QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDW 168 (276)
T ss_dssp HHHHHHHHHHSC-S-----SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCST
T ss_pred HHHHHHHHHhcc-c-----CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcch
Confidence 345566666654 2 37899999999999999999877 679999999999999999999988875 799999999
Q ss_pred CCCCCCCCccceEEccc-------------cccCcC------------CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcC
Q 017428 218 LQQPFPDGQFDLVWSME-------------SGEHMP------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPS 272 (371)
Q Consensus 218 ~~~~~~~~~fD~v~~~~-------------~l~~~~------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 272 (371)
.+. +++++||+|+++. +++|.+ +...+++++.++|+|||++++...
T Consensus 169 ~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-------- 239 (276)
T 2b3t_A 169 FSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG-------- 239 (276)
T ss_dssp TGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC--------
T ss_pred hhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC--------
Confidence 773 4467899999973 333322 347889999999999999998531
Q ss_pred ccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 273 EESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
....+++.++++++||..+++.
T Consensus 240 -----------------------~~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 240 -----------------------WQQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp -----------------------SSCHHHHHHHHHHTTCTTCCEE
T ss_pred -----------------------chHHHHHHHHHHHCCCcEEEEE
Confidence 2357789999999999877654
No 103
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.68 E-value=1.5e-16 Score=141.46 Aligned_cols=132 Identities=15% Similarity=0.094 Sum_probs=107.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC---CCccceEEcc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP---DGQFDLVWSM 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~v~~~ 233 (371)
++.+|||||||+|..+..++... +.+|+|+|+|+.+++.|+++++..++. +++++++|+.+++++ +++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEEe
Confidence 37899999999999999999755 679999999999999999999988874 699999999876643 5789999987
Q ss_pred ccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 017428 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 234 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
. +.+...+++++.++|+|||++++..... . .. ..+++.+.++++||..
T Consensus 149 ~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~----------~---~~---------------~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 149 A----VARLSVLSELCLPLVKKNGLFVALKAAS----------A---EE---------------ELNAGKKAITTLGGEL 196 (240)
T ss_dssp C----CSCHHHHHHHHGGGEEEEEEEEEEECC-----------C---HH---------------HHHHHHHHHHHTTEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCCEEEEEeCCC----------c---hH---------------HHHHHHHHHHHcCCeE
Confidence 5 4678999999999999999999864110 0 00 1345678899999998
Q ss_pred EEEEecCCc
Q 017428 314 IKAEDWSQN 322 (371)
Q Consensus 314 v~~~~~~~~ 322 (371)
+++..+..+
T Consensus 197 ~~~~~~~~~ 205 (240)
T 1xdz_A 197 ENIHSFKLP 205 (240)
T ss_dssp EEEEEEECT
T ss_pred eEEEEEecC
Confidence 887765444
No 104
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.68 E-value=3.5e-17 Score=143.19 Aligned_cols=148 Identities=14% Similarity=0.111 Sum_probs=105.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHH----HHcCCCCCeEEEEcCCCCCCCCCCccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALA----AARGLADKVSFQVGDALQQPFPDGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 232 (371)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.|++.+.+.+ ...++ +++.++++|+.+++++++. |.|+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-CEEEE
Confidence 37899999999999999999987 689999999999888643332 23454 4899999999999887666 76663
Q ss_pred c---ccc--cCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCC---CCHHHHHH
Q 017428 233 M---ESG--EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW---CSTADYVK 304 (371)
Q Consensus 233 ~---~~l--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 304 (371)
. ..+ +|++++..++++++++|||||.+++............ .....+.+ ...+.+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVP---------------EVGEHPEPTPDSADEWLAP 169 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG---------------GGTTCCCCCHHHHHHHHHH
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccccccc---------------ccccCCccchHHHHHHHHH
Confidence 2 222 2667778999999999999999999542211111000 00011111 12445888
Q ss_pred HHHhCCCceEEEEecCCc
Q 017428 305 LLQSLSLEDIKAEDWSQN 322 (371)
Q Consensus 305 ll~~aGF~~v~~~~~~~~ 322 (371)
+++++||++++++.+...
T Consensus 170 ~l~~aGf~i~~~~~~~~~ 187 (218)
T 3mq2_A 170 RYAEAGWKLADCRYLEPE 187 (218)
T ss_dssp HHHHTTEEEEEEEEECHH
T ss_pred HHHHcCCCceeeeccchh
Confidence 999999999988766543
No 105
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.68 E-value=2.5e-17 Score=144.99 Aligned_cols=153 Identities=15% Similarity=0.090 Sum_probs=100.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCC-HHHHHHH---HHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLS-PVQAQRA---NALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s-~~~~~~a---~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 232 (371)
++.+|||||||+|.++..+++.. +..|+|+|+| +.|++.| ++++...++ +++.+.++|+.++|. ..||.|.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~--~~~d~v~~ 100 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPF--ELKNIADS 100 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCG--GGTTCEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhh--hccCeEEE
Confidence 37899999999999999999755 6789999999 6666666 777767776 489999999998852 23344443
Q ss_pred cccccCc--------CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHH
Q 017428 233 MESGEHM--------PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVK 304 (371)
Q Consensus 233 ~~~l~~~--------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (371)
..+...+ .+...++++++++|||||.+++.......... . ...... .....+.++..+++.+
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~----~----~~~~~~--~~~~~~~~~~~~el~~ 170 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEE----A----EIKKRG--LPLLSKAYFLSEQYKA 170 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------------CCHHHHHSHHHHH
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchh----c----hhhhcC--CCCCChhhcchHHHHH
Confidence 3332222 23357899999999999999995432221100 0 000000 0000001112235999
Q ss_pred HHHhCCCceEEEEecCCcc
Q 017428 305 LLQSLSLEDIKAEDWSQNV 323 (371)
Q Consensus 305 ll~~aGF~~v~~~~~~~~~ 323 (371)
+++++||++++.+.+...+
T Consensus 171 ~l~~aGf~v~~~~~~~~~~ 189 (225)
T 3p2e_A 171 ELSNSGFRIDDVKELDNEY 189 (225)
T ss_dssp HHHHHTCEEEEEEEECHHH
T ss_pred HHHHcCCCeeeeeecCHHH
Confidence 9999999999988776543
No 106
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=1.6e-16 Score=139.88 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=100.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCCCCC-CCccceEEcccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQQPFP-DGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~fD~v~~~~~ 235 (371)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++++++++|+ ..++++ +++||+|++.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR-- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE--
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC--
Confidence 3789999999999999999987 78999999999999999987 25799999999 567777 8899999987
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEE
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~ 315 (371)
.++..+++++.++|||||.++... ...+.+++.+.++++||..+.
T Consensus 119 ----~~~~~~l~~~~~~LkpgG~l~~~~-------------------------------~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 119 ----RGPTSVILRLPELAAPDAHFLYVG-------------------------------PRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp ----SCCSGGGGGHHHHEEEEEEEEEEE-------------------------------SSSCCTHHHHHHHHTTCEEEE
T ss_pred ----CCHHHHHHHHHHHcCCCcEEEEeC-------------------------------CcCCHHHHHHHHHHCCCeEEE
Confidence 466788999999999999999111 123566789999999999888
Q ss_pred EEecCC
Q 017428 316 AEDWSQ 321 (371)
Q Consensus 316 ~~~~~~ 321 (371)
+.....
T Consensus 164 ~~~~~~ 169 (226)
T 3m33_A 164 EDHVSV 169 (226)
T ss_dssp EEEEEE
T ss_pred EEeeee
Confidence 765443
No 107
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.67 E-value=5.5e-16 Score=139.42 Aligned_cols=130 Identities=17% Similarity=0.124 Sum_probs=105.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMESG 236 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~~~~l 236 (371)
+.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...++.++++++.+|+.+.+ ++.++||+|+++-.+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 789999999999999999988655999999999999999999999998888999999998864 457899999997554
Q ss_pred cCc--------------------CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCC
Q 017428 237 EHM--------------------PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (371)
Q Consensus 237 ~~~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
... .+...+++.+.++|||||+++++.. .
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-------------------------------~ 178 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR-------------------------------P 178 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEEC-------------------------------T
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc-------------------------------H
Confidence 332 1235799999999999999999641 1
Q ss_pred CCHHHHHHHHHhCCCceEEEEec
Q 017428 297 CSTADYVKLLQSLSLEDIKAEDW 319 (371)
Q Consensus 297 ~~~~~~~~ll~~aGF~~v~~~~~ 319 (371)
....++...+++.||....+...
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEEEEe
Confidence 13556777888888887766543
No 108
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.67 E-value=5.2e-16 Score=143.47 Aligned_cols=108 Identities=19% Similarity=0.170 Sum_probs=91.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC------CCCCeEEEEcCCCCCC----CC--CC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG------LADKVSFQVGDALQQP----FP--DG 225 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~----~~--~~ 225 (371)
++.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.|+++....+ ...++.++++|+.+.+ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 378999999999999999987546799999999999999999887642 1247999999998875 53 45
Q ss_pred ccceEEccccccCc-C---CHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 226 QFDLVWSMESGEHM-P---DKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 226 ~fD~v~~~~~l~~~-~---~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+||+|++..+++++ . +...+++++.++|||||.+++..+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 89999999999887 4 3578999999999999999998753
No 109
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.67 E-value=9.8e-16 Score=130.98 Aligned_cols=108 Identities=15% Similarity=0.049 Sum_probs=93.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~~~~ 235 (371)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++ ++++++++|+.+.+ +++++||+|++...
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 3789999999999999988876345899999999999999999999888 68999999998753 44689999999888
Q ss_pred ccCc-CCHHHHHHHHHH--hcCCCcEEEEEeccC
Q 017428 236 GEHM-PDKSKFVSELAR--VTAPAGTIIIVTWCH 266 (371)
Q Consensus 236 l~~~-~~~~~~l~~~~~--~LkpgG~l~i~~~~~ 266 (371)
+++. ++...+++++.+ +|+|||.+++.....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 7765 677899999999 999999999977543
No 110
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=2.9e-16 Score=135.05 Aligned_cols=108 Identities=17% Similarity=0.213 Sum_probs=92.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~ 234 (371)
++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|+++++..++.++++++.+|+.+.+ +.+++||+|++..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 37899999999999999999986 36999999999999999999999888778999999998775 5568999999876
Q ss_pred cccC---------cCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 235 SGEH---------MPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 235 ~l~~---------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
.+.. ..+...+++++.++|||||++++..+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 5511 113467999999999999999998754
No 111
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.67 E-value=1.1e-15 Score=134.04 Aligned_cols=143 Identities=13% Similarity=0.092 Sum_probs=106.4
Q ss_pred CCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCCCc
Q 017428 152 SEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPDGQ 226 (371)
Q Consensus 152 ~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~ 226 (371)
...+..|+.+|||+|||+|.++..+++.. ..+|+|+|+++.|++.++++++.. +|+..+..|.... +...+.
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccce
Confidence 33444569999999999999999999987 468999999999999998877554 4899999998764 455688
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLL 306 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 306 (371)
+|+|++. +.+..+...++.++++.|||||++++....... .. . .+.-...++..+.|
T Consensus 148 vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-------------d~---~-----~p~~~~~~~ev~~L 204 (233)
T 4df3_A 148 VDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI-------------DV---T-----TEPSEVYKREIKTL 204 (233)
T ss_dssp EEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH-------------HH---H-----TCCCHHHHHHHHHH
T ss_pred EEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC-------------CC---C-----CChHHHHHHHHHHH
Confidence 9998853 445467788999999999999999987532100 00 0 00001223456778
Q ss_pred HhCCCceEEEEecC
Q 017428 307 QSLSLEDIKAEDWS 320 (371)
Q Consensus 307 ~~aGF~~v~~~~~~ 320 (371)
+++||+.++...+.
T Consensus 205 ~~~GF~l~e~i~L~ 218 (233)
T 4df3_A 205 MDGGLEIKDVVHLD 218 (233)
T ss_dssp HHTTCCEEEEEECT
T ss_pred HHCCCEEEEEEccC
Confidence 99999998877643
No 112
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.67 E-value=5.2e-16 Score=137.05 Aligned_cols=133 Identities=14% Similarity=0.209 Sum_probs=101.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----CCCCCCccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----QPFPDGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~v~~ 232 (371)
++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.++++++.. +++.++.+|+.+ .+++ ++||+|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~~~D~v~- 148 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIV-EKVDVIY- 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-CCEEEEE-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccC-ccEEEEE-
Confidence 488999999999999999999863 79999999999999999886543 589999999988 6665 7899998
Q ss_pred cccccCcCCH---HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhC
Q 017428 233 MESGEHMPDK---SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSL 309 (371)
Q Consensus 233 ~~~l~~~~~~---~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 309 (371)
++++++ ..+++++.++|||||++++. +..... +. . .. ...+ ..+++. +|+++
T Consensus 149 ----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~-~~--~-~~-~~~~--------------~~~~l~-~l~~~ 203 (230)
T 1fbn_A 149 ----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSI-DV--T-KD-PKEI--------------FKEQKE-ILEAG 203 (230)
T ss_dssp ----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGT-CS--S-SC-HHHH--------------HHHHHH-HHHHH
T ss_pred ----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCC-CC--C-CC-HHHh--------------hHHHHH-HHHHC
Confidence 345555 77899999999999999997 321110 00 0 00 0011 236677 89999
Q ss_pred CCceEEEEecC
Q 017428 310 SLEDIKAEDWS 320 (371)
Q Consensus 310 GF~~v~~~~~~ 320 (371)
||+.++.....
T Consensus 204 Gf~~~~~~~~~ 214 (230)
T 1fbn_A 204 GFKIVDEVDIE 214 (230)
T ss_dssp TEEEEEEEECT
T ss_pred CCEEEEEEccC
Confidence 99998877643
No 113
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.66 E-value=1e-15 Score=130.63 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=99.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~ 219 (371)
..+.++..+...+ +.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...++.+ ++.+..+|+.+
T Consensus 40 ~~~~l~~~~~~~~-----~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 40 GTKILVENVVVDK-----DDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHCCCCT-----TCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT
T ss_pred HHHHHHHHcccCC-----CCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc
Confidence 3445556665543 789999999999999999987 8899999999999999999999888743 49999999987
Q ss_pred CCCCCCccceEEccccccC-cCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 220 QPFPDGQFDLVWSMESGEH-MPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 220 ~~~~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
. +++++||+|++...+++ ..+...+++++.++|+|||.+++....
T Consensus 114 ~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 114 N-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp T-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred c-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 4 45688999999888876 356689999999999999999998753
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.66 E-value=7.3e-16 Score=134.49 Aligned_cols=104 Identities=22% Similarity=0.172 Sum_probs=89.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~~~~ 235 (371)
+.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...++ +|+.++.+|+.+++ +++++||.|++...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 6799999999999999999987 68999999999999999999998887 57999999998865 66789999987654
Q ss_pred ccCcCC--------HHHHHHHHHHhcCCCcEEEEEe
Q 017428 236 GEHMPD--------KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 236 l~~~~~--------~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
..+... ...+++++.++|||||.|++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 332221 2678999999999999999975
No 115
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.66 E-value=2.9e-16 Score=146.97 Aligned_cols=124 Identities=14% Similarity=0.216 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHH-------HHcCC-CC
Q 017428 138 QVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALA-------AARGL-AD 208 (371)
Q Consensus 138 ~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~-------~~~~~-~~ 208 (371)
....+..++..+.+.+ +.+|||||||+|.+++.++...++ +|+|||+|+.+++.|+++. +..|+ ..
T Consensus 158 ~~~~i~~il~~l~l~~-----gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~ 232 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTD-----DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHA 232 (438)
T ss_dssp HHHHHHHHHHHHCCCT-----TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCC
T ss_pred CHHHHHHHHHhcCCCC-----CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3456777788777765 899999999999999999987765 5999999999999998754 33455 26
Q ss_pred CeEEEEcCCCCCCCCC--CccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCC
Q 017428 209 KVSFQVGDALQQPFPD--GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHR 267 (371)
Q Consensus 209 ~v~~~~~d~~~~~~~~--~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 267 (371)
+++|+++|+.++++.+ ..||+|+++..+ +.++....|.+++++|||||+|++.+...+
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CeEEEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 8999999999987643 479999987665 457888899999999999999999875443
No 116
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.65 E-value=9.6e-16 Score=130.64 Aligned_cols=131 Identities=22% Similarity=0.321 Sum_probs=106.1
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF 222 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 222 (371)
..++..+...+ +.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...++.+++.+..+|+.+ ++
T Consensus 23 ~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~ 95 (192)
T 1l3i_A 23 CLIMCLAEPGK-----NDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-AL 95 (192)
T ss_dssp HHHHHHHCCCT-----TCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HH
T ss_pred HHHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hc
Confidence 33444455543 7899999999999999999875 89999999999999999999988876789999999876 23
Q ss_pred CC-CccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHH
Q 017428 223 PD-GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (371)
Q Consensus 223 ~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (371)
+. ++||+|++..+++ +...+++++.++|+|||.+++..... .+..+
T Consensus 96 ~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~------------------------------~~~~~ 142 (192)
T 1l3i_A 96 CKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILL------------------------------ETKFE 142 (192)
T ss_dssp TTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBH------------------------------HHHHH
T ss_pred ccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCc------------------------------chHHH
Confidence 33 5899999987764 46889999999999999999976321 02456
Q ss_pred HHHHHHhCCCce
Q 017428 302 YVKLLQSLSLED 313 (371)
Q Consensus 302 ~~~ll~~aGF~~ 313 (371)
+.+++++.||..
T Consensus 143 ~~~~l~~~g~~~ 154 (192)
T 1l3i_A 143 AMECLRDLGFDV 154 (192)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHCCCce
Confidence 788999999943
No 117
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.65 E-value=7.2e-16 Score=137.68 Aligned_cols=164 Identities=13% Similarity=0.161 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCc--ChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEE
Q 017428 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI--GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSF 212 (371)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~Gt--G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~ 212 (371)
..+.++.+.++.+.... ...+|||||||+ +..+..+++.. +++|+++|.|+.|++.|++++...+ ..++.|
T Consensus 61 ~nr~fl~rav~~l~~~~----g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~ 135 (277)
T 3giw_A 61 ANRDWMNRAVAHLAKEA----GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAY 135 (277)
T ss_dssp HHHHHHHHHHHHHHHTS----CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEE
T ss_pred HHHHHHHHHHHHhcccc----CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEE
Confidence 33455555555543211 146899999997 44555655543 6899999999999999999886432 247999
Q ss_pred EEcCCCCCC----CC--CCccc-----eEEccccccCcCC---HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccCh
Q 017428 213 QVGDALQQP----FP--DGQFD-----LVWSMESGEHMPD---KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQP 278 (371)
Q Consensus 213 ~~~d~~~~~----~~--~~~fD-----~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~ 278 (371)
+++|+.+.+ .+ .+.|| .|+++.+|||+++ +..+++++++.|+|||+|++.+.+.+... .
T Consensus 136 v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p---~---- 208 (277)
T 3giw_A 136 VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP---Q---- 208 (277)
T ss_dssp EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH---H----
T ss_pred EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH---H----
Confidence 999998852 11 34566 5888999999987 57899999999999999999987654211 0
Q ss_pred HHHHHHHHHhhccCCC-CCCCHHHHHHHHHhCCCceEE
Q 017428 279 WEQELLKKICDAYYLP-AWCSTADYVKLLQSLSLEDIK 315 (371)
Q Consensus 279 ~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~aGF~~v~ 315 (371)
.. ..+.......+.+ .+.+.+++..+|. ||+.++
T Consensus 209 ~~-~~~~~~~~~~g~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 209 EV-GRVAREYAARNMPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp HH-HHHHHHHHHTTCCCCCCCHHHHHHTTT--TSEECT
T ss_pred HH-HHHHHHHHhcCCCCccCCHHHHHHHhC--CCcccC
Confidence 01 1112222222222 3679999999994 999654
No 118
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.65 E-value=1e-15 Score=137.12 Aligned_cols=136 Identities=18% Similarity=0.284 Sum_probs=112.6
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|+++++..++++++++..+|+.+.
T Consensus 83 ~~i~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 83 ALIVAYAGISP-----GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred HHHHHhhCCCC-----CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 34555665554 8899999999999999999984 6899999999999999999999999877799999999864
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
+++++||+|++ +.+++..+++++.++|+|||.+++...+. ...+
T Consensus 158 -~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~ 201 (255)
T 3mb5_A 158 -IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCS------------------------------NQVM 201 (255)
T ss_dssp -CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSH------------------------------HHHH
T ss_pred -cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCH------------------------------HHHH
Confidence 66788999987 45677889999999999999999976321 0245
Q ss_pred HHHHHHHhCC--CceEEEEec
Q 017428 301 DYVKLLQSLS--LEDIKAEDW 319 (371)
Q Consensus 301 ~~~~ll~~aG--F~~v~~~~~ 319 (371)
++.+.++++| |..+++...
T Consensus 202 ~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 202 RLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp HHHHHHHHTGGGBSCCEEECC
T ss_pred HHHHHHHHcCCCccccEEEEE
Confidence 6778899999 988876543
No 119
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=1.5e-15 Score=131.89 Aligned_cols=112 Identities=17% Similarity=0.181 Sum_probs=97.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
....++..+.+.+ +.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++...+++ ++++..+|+.+.
T Consensus 65 ~~~~~~~~l~~~~-----~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 65 MVARMTELLELTP-----QSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 4455566666554 899999999999999999998 789999999999999999999988875 799999999887
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
..++++||+|++..+++++++ ++.++|||||++++....
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 656789999999999999876 588999999999997643
No 120
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.65 E-value=4e-16 Score=136.57 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=88.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C--CCCCccceEEccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P--FPDGQFDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~fD~v~~~~ 234 (371)
+.+|||||||+|.++..+++.. +..|+|+|+|+.+++.|++++...++ .|+.++.+|+.+. + +++++||.|++..
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 6799999999999999999987 67899999999999999999998887 4799999998874 3 6789999999875
Q ss_pred cccCcCCH--------HHHHHHHHHhcCCCcEEEEEe
Q 017428 235 SGEHMPDK--------SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 235 ~l~~~~~~--------~~~l~~~~~~LkpgG~l~i~~ 263 (371)
...+.... ..+++++.++|||||.+++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 44332221 259999999999999999976
No 121
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.65 E-value=1.2e-15 Score=128.37 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=99.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++..+++. + +|+|+|+|+.+++. .++++++++|+.+ ++++++||+|+++..+++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPPYVP 90 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBT
T ss_pred CCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCCCcc
Confidence 679999999999999999987 4 99999999999987 2578999999988 566689999999988876
Q ss_pred cCCH---------HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhC
Q 017428 239 MPDK---------SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSL 309 (371)
Q Consensus 239 ~~~~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 309 (371)
..+. ..+++++.+.| |||++++.... ....+++.++++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~------------------------------~~~~~~l~~~l~~~ 139 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE------------------------------ANRPKEVLARLEER 139 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG------------------------------GGCHHHHHHHHHHT
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec------------------------------CCCHHHHHHHHHHC
Confidence 5443 57889999999 99999997732 12577889999999
Q ss_pred CCceEEEEecCCc
Q 017428 310 SLEDIKAEDWSQN 322 (371)
Q Consensus 310 GF~~v~~~~~~~~ 322 (371)
||+.+.+......
T Consensus 140 gf~~~~~~~~~~~ 152 (170)
T 3q87_B 140 GYGTRILKVRKIL 152 (170)
T ss_dssp TCEEEEEEEEECS
T ss_pred CCcEEEEEeeccC
Confidence 9998887654443
No 122
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.65 E-value=3.1e-15 Score=126.50 Aligned_cols=132 Identities=17% Similarity=0.151 Sum_probs=108.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
+...++..+...+ +.+|||+|||+|.++..+++ .+.+|+|+|+++.+++.+++++...++ +++.++.+|+.+
T Consensus 23 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~- 94 (183)
T 2yxd_A 23 IRAVSIGKLNLNK-----DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-
T ss_pred HHHHHHHHcCCCC-----CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-
Confidence 3344555555443 78999999999999999998 478999999999999999999998887 579999999987
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
++++++||+|++..+ .+...+++++.++ |||.+++..... ....
T Consensus 95 ~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~------------------------------~~~~ 138 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL------------------------------ENAA 138 (183)
T ss_dssp HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH------------------------------HHHH
T ss_pred cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc------------------------------ccHH
Confidence 666689999999887 6788999999998 999999987321 0245
Q ss_pred HHHHHHHhCCCceEEE
Q 017428 301 DYVKLLQSLSLEDIKA 316 (371)
Q Consensus 301 ~~~~ll~~aGF~~v~~ 316 (371)
++.+.|+++||.+..+
T Consensus 139 ~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 139 KIINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCeEEEE
Confidence 6788999999875544
No 123
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.65 E-value=1e-16 Score=143.72 Aligned_cols=150 Identities=14% Similarity=0.125 Sum_probs=104.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCC---CCccceE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFP---DGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~---~~~fD~v 230 (371)
++.+|||+|||+|.++..++... +.+|+|+|+|+.+++.|+++++..++.++++++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 36799999999999999998876 7899999999999999999999998877799999998662 344 2689999
Q ss_pred EccccccCcC---------------CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhc-cC--
Q 017428 231 WSMESGEHMP---------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA-YY-- 292 (371)
Q Consensus 231 ~~~~~l~~~~---------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 292 (371)
+++-.+++.. ....++.+++++|||||.+.+.+.. ........... +.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~--------------~~~~~~~l~~~g~~~~ 210 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI--------------IHDSLQLKKRLRWYSC 210 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHH--------------HHHHHHHGGGBSCEEE
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH--------------HHHHHhcccceEEEEE
Confidence 9985554432 1134678899999999998876421 00111111111 10
Q ss_pred -CCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 293 -LPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 293 -~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
.......+++.++|+++||+.+++..+..
T Consensus 211 ~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~ 240 (254)
T 2h00_A 211 MLGKKCSLAPLKEELRIQGVPKVTYTEFCQ 240 (254)
T ss_dssp EESSTTSHHHHHHHHHHTTCSEEEEEEEEE
T ss_pred CCCChhHHHHHHHHHHHcCCCceEEEEEec
Confidence 01123458899999999999988766543
No 124
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.64 E-value=4e-15 Score=149.13 Aligned_cols=105 Identities=22% Similarity=0.296 Sum_probs=92.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHc------CCCCCeEEEEcCCCCCCCCCCccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAAR------GLADKVSFQVGDALQQPFPDGQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~~~fD~v 230 (371)
+.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++... ++ .+++|+++|+.++++++++||+|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCCeeEE
Confidence 78999999999999999998752 79999999999999999977643 33 47999999999999888999999
Q ss_pred EccccccCcCCHH--HHHHHHHHhcCCCcEEEEEecc
Q 017428 231 WSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 231 ~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
++..+++|+++.. .++++++++|||| .+++.+..
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999999998865 5999999999999 77777643
No 125
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=1.7e-15 Score=135.84 Aligned_cols=135 Identities=14% Similarity=0.203 Sum_probs=111.0
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQ 219 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~ 219 (371)
..++..+.+.+ +.+|||+|||+|.++..+++.+ +.+|+++|+++.+++.|+++++.. + .+++.+..+|+.+
T Consensus 86 ~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 86 SAMVTLLDLAP-----GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGG
T ss_pred HHHHHHcCCCC-----CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhh
Confidence 45556666554 8899999999999999999985 579999999999999999999887 6 4689999999988
Q ss_pred CCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCH
Q 017428 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (371)
Q Consensus 220 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (371)
.++++++||+|++ +.+++..+++++.++|+|||.+++...+. . ..
T Consensus 160 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---------------~---------------~~ 204 (258)
T 2pwy_A 160 AELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNI---------------T---------------QV 204 (258)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCH---------------H---------------HH
T ss_pred cCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH---------------H---------------HH
Confidence 8777789999997 35677789999999999999999987321 0 13
Q ss_pred HHHHHHHHhCCCceEEEEe
Q 017428 300 ADYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 300 ~~~~~ll~~aGF~~v~~~~ 318 (371)
.++.+.|+++||..+++.+
T Consensus 205 ~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 205 LELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEE
Confidence 4566778889999877654
No 126
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.64 E-value=7.1e-16 Score=137.77 Aligned_cols=132 Identities=13% Similarity=0.006 Sum_probs=107.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC---CCccceEEcc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP---DGQFDLVWSM 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~v~~~ 233 (371)
++.+|||||||+|..++.++..+ +.+|+++|+|+.+++.|+++++..++. +++++++|+++.+.. .++||+|++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEEC
Confidence 47899999999999999999876 689999999999999999999999885 699999999876532 4789999986
Q ss_pred ccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 017428 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (371)
Q Consensus 234 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~ 313 (371)
. +.+...+++.+.++|||||++++..-... .. ...++.+.++..||..
T Consensus 159 a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~-------------~~---------------e~~~~~~~l~~~G~~~ 206 (249)
T 3g89_A 159 A----VAPLCVLSELLLPFLEVGGAAVAMKGPRV-------------EE---------------ELAPLPPALERLGGRL 206 (249)
T ss_dssp S----SCCHHHHHHHHGGGEEEEEEEEEEECSCC-------------HH---------------HHTTHHHHHHHHTEEE
T ss_pred C----cCCHHHHHHHHHHHcCCCeEEEEEeCCCc-------------HH---------------HHHHHHHHHHHcCCeE
Confidence 4 45778999999999999999998652100 00 1234667788889999
Q ss_pred EEEEecCCc
Q 017428 314 IKAEDWSQN 322 (371)
Q Consensus 314 v~~~~~~~~ 322 (371)
+++..+..+
T Consensus 207 ~~~~~~~~p 215 (249)
T 3g89_A 207 GEVLALQLP 215 (249)
T ss_dssp EEEEEEECT
T ss_pred EEEEEeeCC
Confidence 888877554
No 127
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.63 E-value=2.4e-15 Score=130.28 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=88.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
+.+|||+|||+|.++..++..+ +.+|+|+|+|+.+++.+++++...++. ++.+..+|+.+.+ +.++||+|++..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-SEPPFDGVISRA--- 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-CCSCEEEEECSC---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-ccCCcCEEEEec---
Confidence 6799999999999999999876 679999999999999999999988874 5999999998865 457899999754
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+.+...+++++.++|+|||++++..
T Consensus 141 -~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 -FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp -SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred -cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3678899999999999999999974
No 128
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.63 E-value=2.7e-15 Score=136.33 Aligned_cols=129 Identities=16% Similarity=0.068 Sum_probs=106.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.++++++++|+.+.+. +++||+|++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc--
Confidence 37899999999999999999974337999999999999999999999987779999999998765 688999998533
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~ 315 (371)
.+...++.++.++|||||++++.+....... .....+.+.+.++++||....
T Consensus 202 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------------------------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 --VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM------------------------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------------------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred --hhHHHHHHHHHHHCCCCeEEEEEEeeccccc------------------------cccHHHHHHHHHHHcCCeeEE
Confidence 3446789999999999999999886431110 012467788999999998766
No 129
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.63 E-value=1e-15 Score=138.89 Aligned_cols=133 Identities=15% Similarity=0.215 Sum_probs=106.9
Q ss_pred HHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCC
Q 017428 144 ETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQ 220 (371)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~ 220 (371)
.++..+.+. ++.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|+++++.. +. +++.+..+|+.+
T Consensus 101 ~~~~~~~~~-----~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~- 173 (275)
T 1yb2_A 101 YIIMRCGLR-----PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD- 173 (275)
T ss_dssp -----CCCC-----TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-
T ss_pred HHHHHcCCC-----CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-
Confidence 344445444 48899999999999999999874 679999999999999999999887 74 589999999987
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
++++++||+|++ +++++..+++++.++|||||++++..... . ..+
T Consensus 174 ~~~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~---------------~---------------~~~ 218 (275)
T 1yb2_A 174 FISDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF---------------D---------------QSE 218 (275)
T ss_dssp CCCSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH---------------H---------------HHH
T ss_pred cCcCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH---------------H---------------HHH
Confidence 566788999997 56788899999999999999999987320 0 234
Q ss_pred HHHHHHHhCCCceEEEEe
Q 017428 301 DYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 301 ~~~~ll~~aGF~~v~~~~ 318 (371)
++.+.|+++||..+++..
T Consensus 219 ~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 219 KTVLSLSASGMHHLETVE 236 (275)
T ss_dssp HHHHHSGGGTEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEE
Confidence 667788899999887765
No 130
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.63 E-value=1.5e-15 Score=143.07 Aligned_cols=148 Identities=19% Similarity=0.258 Sum_probs=110.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ . ++++++.+|+.+ +++ .||+|++..++|
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKWVLH 262 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEccccc
Confidence 6899999999999999999987 678999999 788877653 2 469999999987 655 499999999999
Q ss_pred CcCCHH--HHHHHHHHhcCC---CcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 017428 238 HMPDKS--KFVSELARVTAP---AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (371)
Q Consensus 238 ~~~~~~--~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~ 312 (371)
++++.. .++++++++|+| ||+|++.++..+....... . ......+............++.++|.++|+++||+
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~-~-~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 340 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG-L-TELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFS 340 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHH-H-HHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccch-h-hhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCC
Confidence 999876 999999999999 9999999876543221100 0 01111111100000011246899999999999999
Q ss_pred eEEEEec
Q 017428 313 DIKAEDW 319 (371)
Q Consensus 313 ~v~~~~~ 319 (371)
++++...
T Consensus 341 ~~~~~~~ 347 (358)
T 1zg3_A 341 SYKITPI 347 (358)
T ss_dssp EEEEEEE
T ss_pred eeEEEec
Confidence 9988653
No 131
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.63 E-value=2.8e-15 Score=140.08 Aligned_cols=102 Identities=23% Similarity=0.238 Sum_probs=90.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccc---
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME--- 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~--- 234 (371)
++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.+++.++.+|+.++++++++||+|++..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 3789999999999999999887334899999997 999999999999887899999999999888888999999866
Q ss_pred cccCcCCHHHHHHHHHHhcCCCcEEE
Q 017428 235 SGEHMPDKSKFVSELARVTAPAGTII 260 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~~~LkpgG~l~ 260 (371)
.+.+..+...++.++.++|||||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 45555677889999999999999987
No 132
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.63 E-value=6.9e-16 Score=134.15 Aligned_cols=105 Identities=22% Similarity=0.290 Sum_probs=91.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++... .+++.+.++|+.++++++++||+|++..+++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 3789999999999999999987323899999999999999988753 2479999999999888889999999988886
Q ss_pred CcC---------------CHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 238 HMP---------------DKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 238 ~~~---------------~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
++. +...+++++.++|||||.+++.++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 654 5689999999999999999998853
No 133
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.63 E-value=2.4e-15 Score=134.80 Aligned_cols=124 Identities=19% Similarity=0.277 Sum_probs=103.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.+++.+++. +.+|+|+|+++.+++.|++++..+++. +.+..+|+.+. +++++||+|+++...+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-LPFGPFDLLVANLYAE 195 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-GGGCCEEEEEEECCHH
T ss_pred CCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-CcCCCCCEEEECCcHH
Confidence 3789999999999999998886 669999999999999999999988874 89999998763 4467899999875443
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
....++.++.++|||||++++..... ...+++.+.++++||+++++.
T Consensus 196 ---~~~~~l~~~~~~LkpgG~lils~~~~------------------------------~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 196 ---LHAALAPRYREALVPGGRALLTGILK------------------------------DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp ---HHHHHHHHHHHHEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTTCEEEEEE
T ss_pred ---HHHHHHHHHHHHcCCCCEEEEEeecc------------------------------CCHHHHHHHHHHCCCEEEEEe
Confidence 34688999999999999999976421 136788999999999998876
Q ss_pred e
Q 017428 318 D 318 (371)
Q Consensus 318 ~ 318 (371)
.
T Consensus 243 ~ 243 (254)
T 2nxc_A 243 A 243 (254)
T ss_dssp E
T ss_pred c
Confidence 4
No 134
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.62 E-value=1.6e-16 Score=138.09 Aligned_cols=143 Identities=16% Similarity=0.142 Sum_probs=92.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 017428 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (371)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (371)
..+++.++..+.... ++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+. +++++++|+
T Consensus 15 ~~~~~~~~~~l~~~~----~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 88 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMP----SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHTTCC----TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHH
T ss_pred HHHHHHHHHHhhhcC----CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcch
Confidence 445666666665411 47899999999999999999987 56999999999999999999887765 788999998
Q ss_pred CCCCCCC-----CccceEEccccccCcCCH--------------------------HHHHHHHHHhcCCCcEEEEEeccC
Q 017428 218 LQQPFPD-----GQFDLVWSMESGEHMPDK--------------------------SKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 218 ~~~~~~~-----~~fD~v~~~~~l~~~~~~--------------------------~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
.+ ++++ ++||+|+++..+++..+. ..+++++.++|||||++++.+..
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~- 166 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG- 166 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT-
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC-
Confidence 77 5454 899999996554332211 67889999999999995555421
Q ss_pred CCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHH--hCCCceEEEEe
Q 017428 267 RDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ--SLSLEDIKAED 318 (371)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~aGF~~v~~~~ 318 (371)
....+.+.++++ ++||..+.+..
T Consensus 167 -----------------------------~~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 167 -----------------------------HNQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp -----------------------------TSCHHHHHHHTGGGGGGTEECCEEE
T ss_pred -----------------------------CccHHHHHHHHHHhhcCCceEEEEE
Confidence 124667788888 89998766543
No 135
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.62 E-value=3e-15 Score=140.37 Aligned_cols=103 Identities=25% Similarity=0.252 Sum_probs=91.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.++++++.+|+.++++++++||+|++..+.+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 3789999999999999999987334999999995 999999999999998889999999999988889999999876543
Q ss_pred ---CcCCHHHHHHHHHHhcCCCcEEEE
Q 017428 238 ---HMPDKSKFVSELARVTAPAGTIII 261 (371)
Q Consensus 238 ---~~~~~~~~l~~~~~~LkpgG~l~i 261 (371)
+..+...++.++.++|||||+++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 447789999999999999999874
No 136
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.61 E-value=2.6e-15 Score=134.24 Aligned_cols=112 Identities=14% Similarity=0.120 Sum_probs=86.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ- 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 219 (371)
.+..++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++++... .+.....++..
T Consensus 33 ~~~~il~~l~l~~-----g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~ 102 (261)
T 3iv6_A 33 DRENDIFLENIVP-----GSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAE 102 (261)
T ss_dssp HHHHHHHTTTCCT-----TCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeecccc
Confidence 3455666666654 889999999999999999987 789999999999999999986543 12333333222
Q ss_pred -CCCCCCccceEEccccccCcC--CHHHHHHHHHHhcCCCcEEEEEe
Q 017428 220 -QPFPDGQFDLVWSMESGEHMP--DKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 220 -~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
....+++||+|++..+++|+. +...+++++.++| |||.+++..
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 111257899999999999985 4577999999999 999999875
No 137
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.61 E-value=2.3e-15 Score=142.37 Aligned_cols=140 Identities=20% Similarity=0.237 Sum_probs=108.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++..+++ +++++.+|+.+.+.++++||+|+++..++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccccCCCeEEEEECCchh
Confidence 3789999999999999999987 78999999999999999999998886 48999999998876668999999998888
Q ss_pred C-----cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 017428 238 H-----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (371)
Q Consensus 238 ~-----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~ 312 (371)
+ ..+...+++++.++|||||.++++..... .+ ...+..... +++.+ ++.||.
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l-------~~----~~~l~~~f~-----------~v~~l-~~~gF~ 366 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL-------KY----EPLLEEKFG-----------AFQTL-KVAEYK 366 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS-------CH----HHHHHHHHS-----------CCEEE-EESSSE
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC-------Ch----HHHHHHhhc-----------cEEEE-eCCCEE
Confidence 7 44568899999999999999999763221 11 122222111 12233 778999
Q ss_pred eEEEEecCCcc
Q 017428 313 DIKAEDWSQNV 323 (371)
Q Consensus 313 ~v~~~~~~~~~ 323 (371)
+++...+..+-
T Consensus 367 Vl~a~~~~~~~ 377 (381)
T 3dmg_A 367 VLFAEKRGRHH 377 (381)
T ss_dssp EEEEECC----
T ss_pred EEEEEEecccc
Confidence 99887766553
No 138
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.61 E-value=4.4e-16 Score=130.55 Aligned_cols=103 Identities=11% Similarity=0.175 Sum_probs=89.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||+|||+|.++..++... +++|+++|+|+.|++.+++++...|+..++++ .|.... .+.++||+|++..++
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYDVVFLLKML 125 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEEEEEEETCH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcChhhHhhHH
Confidence 37899999999999999998765 67999999999999999999999998656766 565443 356889999999999
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|++.+.+..+.++++.|+|||.++-..
T Consensus 126 HlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 999666778889999999999988776
No 139
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.60 E-value=2.7e-15 Score=131.61 Aligned_cols=106 Identities=18% Similarity=0.255 Sum_probs=90.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CC----CCccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP----DGQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~----~~~fD~v 230 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++++|+.+. + +. .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 7899999999999999999865 6799999999999999999999999877899999997552 2 22 2689999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
++....++..+...++..+ ++|||||.|++.+..
T Consensus 139 ~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 139 FLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9988777776666778777 999999999986543
No 140
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.60 E-value=9.2e-15 Score=129.19 Aligned_cols=104 Identities=22% Similarity=0.264 Sum_probs=90.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~fD~v~~~~~ 235 (371)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|+++++..++.++++++.+|+.+. + ..+++||+|++...
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 7899999999999999999955 7899999999999999999999999877999999999774 3 23689999997643
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
..+...+++++.++|||||+|++.+..
T Consensus 152 ---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 152 ---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 456788999999999999999886543
No 141
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=1.3e-14 Score=129.45 Aligned_cols=104 Identities=21% Similarity=0.288 Sum_probs=89.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCC--CCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP--DGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~--~~~fD~v~~~ 233 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++.+|+.+. +.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 7899999999999999999976 5799999999999999999999999988999999998662 322 3589999986
Q ss_pred ccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 234 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
. ...+...+++++.++|||||+|++.+..
T Consensus 144 ~---~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 144 A---DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp S---CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred C---chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 5 3456678999999999999999987654
No 142
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.60 E-value=5.8e-15 Score=134.04 Aligned_cols=135 Identities=20% Similarity=0.268 Sum_probs=110.4
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
..++..+.+.+ +.+|||+|||+|.++..+++.+ +.+|+++|+++.+++.|+++++..++.+++.+..+|+.+.
T Consensus 102 ~~i~~~~~~~~-----~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 102 SFIAMMLDVKE-----GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred HHHHHHhCCCC-----CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 44555666554 8899999999999999999984 5799999999999999999999888767899999999876
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHH
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
+++++||+|++ +.+++..+++++.++|+|||.+++...+. . ...
T Consensus 177 -~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~---------------~---------------~~~ 220 (277)
T 1o54_A 177 -FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTT---------------N---------------QVQ 220 (277)
T ss_dssp -CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSH---------------H---------------HHH
T ss_pred -ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCH---------------H---------------HHH
Confidence 56678999997 34677789999999999999999987321 0 134
Q ss_pred HHHHHHHhCCCceEEEEe
Q 017428 301 DYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 301 ~~~~ll~~aGF~~v~~~~ 318 (371)
++.+.|+++||..+++..
T Consensus 221 ~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 221 ETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp HHHHHHHHSSEEEEEEEC
T ss_pred HHHHHHHHCCCceeEEEE
Confidence 566778889999877653
No 143
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.60 E-value=1.9e-14 Score=130.88 Aligned_cols=134 Identities=13% Similarity=0.079 Sum_probs=100.3
Q ss_pred CCEEEEECCCcChHHHHHHHHcCC-EEEEEeC-CHHHHHHHHHHH-----HHcCCC----CCeEEEEcCCCCCC--C---
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGA-KCQGITL-SPVQAQRANALA-----AARGLA----DKVSFQVGDALQQP--F--- 222 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~-s~~~~~~a~~~~-----~~~~~~----~~v~~~~~d~~~~~--~--- 222 (371)
+.+|||||||+|.+++.+++. +. +|+|+|+ |+.+++.|++++ +..++. +++.+...|..+.. +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 789999999999999988886 55 9999999 899999999998 555553 47888877765531 2
Q ss_pred -CCCccceEEccccccCcCCHHHHHHHHHHhcC---C--CcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCC
Q 017428 223 -PDGQFDLVWSMESGEHMPDKSKFVSELARVTA---P--AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (371)
Q Consensus 223 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
++++||+|++..+++|.++...+++.+.++|+ | ||.++++-..... . + .
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~-------------~-~-----------~ 213 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRP-------------H-L-----------A 213 (281)
T ss_dssp HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-------------------------------
T ss_pred ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec-------------c-c-----------c
Confidence 35789999999999999999999999999999 9 9998775321100 0 0 0
Q ss_pred CCHHHHHHHHHhCC-CceEEEEe
Q 017428 297 CSTADYVKLLQSLS-LEDIKAED 318 (371)
Q Consensus 297 ~~~~~~~~ll~~aG-F~~v~~~~ 318 (371)
....++.+.++++| |+++.+..
T Consensus 214 ~~~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 214 ERDLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp --CTHHHHHHHHSTTEEEEEEEC
T ss_pred hhHHHHHHHHHhcCCEEEEEecc
Confidence 12345667889999 99887643
No 144
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.60 E-value=5.8e-15 Score=139.83 Aligned_cols=103 Identities=26% Similarity=0.306 Sum_probs=91.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||||||+|.++..+++. ++ +|+|+|+| .|++.|+++++.+++.++++++.+|+.+++++ ++||+|++..+.
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 4889999999999999999987 55 99999999 99999999999999988899999999998876 899999996655
Q ss_pred cCc---CCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 237 EHM---PDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 237 ~~~---~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+++ .+...+++++.++|||||.+++..
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 554 457889999999999999998754
No 145
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.60 E-value=9.5e-15 Score=127.53 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=105.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||||||+|.+++.+++.. ..+|+++|+++.+++.|+++++.+++.+++++..+|..+...+++.||+|++.++.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 37899999999999999999875 35799999999999999999999999888999999998865444579998876544
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEE
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 316 (371)
. .-...++.+..+.|+++|+|++.-. ...+.++++|.+.||.+++.
T Consensus 101 g--~lI~~IL~~~~~~l~~~~~lIlqp~--------------------------------~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 101 G--RLIADILNNDIDKLQHVKTLVLQPN--------------------------------NREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp H--HHHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHHHHHHHTTEEEEEE
T ss_pred h--HHHHHHHHHHHHHhCcCCEEEEECC--------------------------------CChHHHHHHHHHCCCEEEEE
Confidence 3 2356789999999999999998641 14677889999999998876
Q ss_pred E
Q 017428 317 E 317 (371)
Q Consensus 317 ~ 317 (371)
.
T Consensus 147 ~ 147 (230)
T 3lec_A 147 D 147 (230)
T ss_dssp E
T ss_pred E
Confidence 5
No 146
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.59 E-value=5.4e-15 Score=129.64 Aligned_cols=120 Identities=13% Similarity=0.198 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEE
Q 017428 138 QVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQV 214 (371)
Q Consensus 138 ~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~ 214 (371)
...++..++.....+ ++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++. ++++++.
T Consensus 41 ~~~~l~~l~~~~~~~-----~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 41 TGQLLTTLAATTNGN-----GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp HHHHHHHHHHHSCCT-----TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred HHHHHHHHHHhhCCC-----CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 344555555554422 24599999999999999999976 589999999999999999999999987 7899999
Q ss_pred cCCCCC--CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 215 GDALQQ--PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 215 ~d~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+|+.+. .+++++||+|++... ..+...+++++.++|||||++++.+..
T Consensus 116 gda~~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 116 SRPLDVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred cCHHHHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 998764 233689999998643 356678999999999999999996543
No 147
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.59 E-value=3e-15 Score=129.31 Aligned_cols=106 Identities=15% Similarity=0.063 Sum_probs=89.3
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCCC--CCCCc-cceEEccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQP--FPDGQ-FDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~--~~~~~-fD~v~~~~ 234 (371)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++. ++++++.+|+.+.. +++++ ||+|++..
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 6899999999999999877764458999999999999999999988874 58999999987642 23578 99999987
Q ss_pred cccCcCCHHHHHHHH--HHhcCCCcEEEEEecc
Q 017428 235 SGEHMPDKSKFVSEL--ARVTAPAGTIIIVTWC 265 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~ 265 (371)
.+ +..+...+++.+ .++|+|||.+++....
T Consensus 134 ~~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 134 PF-HFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CS-SSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CC-CCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 74 356778889999 6789999999987654
No 148
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.59 E-value=1.1e-14 Score=126.77 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=80.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC----CCCCCccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ----PFPDGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~v~~ 232 (371)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.+.+..+.. .++.++.+|+... ++. ++||+|++
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 58899999999999999999886 369999999999887766665543 4799999998773 444 88999998
Q ss_pred cccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.. ..+ .+...++++++++|||||++++..
T Consensus 133 ~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DI-AQK-NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CC-CST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ec-cCh-hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 72 222 234456999999999999999974
No 149
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.59 E-value=1.2e-14 Score=138.65 Aligned_cols=119 Identities=15% Similarity=0.189 Sum_probs=96.3
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHH-------HHHHHHcCCC-CCe
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRA-------NALAAARGLA-DKV 210 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a-------~~~~~~~~~~-~~v 210 (371)
..+..++..+.+.+ +.+|||||||+|.++..+++.++ .+|+|+|+++.+++.| ++++...|+. .++
T Consensus 229 ~~v~~ml~~l~l~~-----g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 229 NFLSDVYQQCQLKK-----GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHhcCCCC-----CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 35566677766654 89999999999999999999765 5799999999999998 8888888853 689
Q ss_pred EEEEcCCCCC--CC--CCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 211 SFQVGDALQQ--PF--PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 211 ~~~~~d~~~~--~~--~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+++++|.... ++ ..++||+|+++..+ +.++...+++++.++|||||.+++.+.
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred EEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 9999865432 12 24789999987666 446788899999999999999999763
No 150
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.59 E-value=1.2e-14 Score=134.48 Aligned_cols=112 Identities=15% Similarity=0.269 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
....++..+.+.+ +.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|+++++..++. ++.+..+|+.
T Consensus 63 ~~~~l~~~l~~~~-----~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~ 136 (317)
T 1dl5_A 63 LMALFMEWVGLDK-----GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGG
T ss_pred HHHHHHHhcCCCC-----cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChh
Confidence 4556667666654 88999999999999999998762 56999999999999999999988874 5999999998
Q ss_pred CCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+.+.++++||+|++..+++|+. +++.++|||||++++...
T Consensus 137 ~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred hccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 8654568899999999999987 578899999999999753
No 151
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.59 E-value=1.9e-15 Score=127.69 Aligned_cols=120 Identities=13% Similarity=0.048 Sum_probs=94.4
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~-~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
+.+.++..+. .. ++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++..++.+++.++.+|+.+
T Consensus 18 ~~~~~~~~l~~~~-----~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 18 VRGAIFNMIGPYF-----NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp CHHHHHHHHCSCC-----CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhc-----CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 3444555444 22 37899999999999999998873369999999999999999999988887789999999877
Q ss_pred C-CCCCCccceEEccccccCcCCHHHHHHHHH--HhcCCCcEEEEEeccC
Q 017428 220 Q-PFPDGQFDLVWSMESGEHMPDKSKFVSELA--RVTAPAGTIIIVTWCH 266 (371)
Q Consensus 220 ~-~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 266 (371)
. +..+++||+|++...++ ......+++.+. ++|+|||.+++.....
T Consensus 93 ~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 93 AIDCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHHHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred hHHhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 3 33346799999876542 244567777776 9999999999987543
No 152
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=1.7e-14 Score=125.76 Aligned_cols=112 Identities=21% Similarity=0.303 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
....++..+...+ +.+|||+|||+|.++..+++..+ .+|+++|+++.+++.+++++...+++ ++.+..+|+.
T Consensus 65 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~ 138 (215)
T 2yxe_A 65 MVGMMCELLDLKP-----GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGG
T ss_pred HHHHHHHhhCCCC-----CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcc
Confidence 3445556655544 78999999999999999999864 79999999999999999999888774 6999999985
Q ss_pred CCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.....+++||+|++..+++|+. +++.++|||||++++...
T Consensus 139 ~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp GCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred cCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEEC
Confidence 5322367899999999999887 488999999999999864
No 153
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.59 E-value=5.3e-15 Score=138.06 Aligned_cols=160 Identities=14% Similarity=0.130 Sum_probs=90.2
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcC----------CCCCe
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARG----------LADKV 210 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----------~~~~v 210 (371)
..++..+.+.+ +.+|||+|||+|.++..+++..+ .+|+++|+++.+++.|++++...+ ...++
T Consensus 95 ~~~l~~l~~~~-----g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v 169 (336)
T 2b25_A 95 NMILSMMDINP-----GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV 169 (336)
T ss_dssp HHHHHHHTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE
T ss_pred HHHHHhcCCCC-----CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce
Confidence 44455555554 88999999999999999999753 799999999999999999987632 33689
Q ss_pred EEEEcCCCCC--CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHh
Q 017428 211 SFQVGDALQQ--PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC 288 (371)
Q Consensus 211 ~~~~~d~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (371)
++..+|+.+. ++++++||+|++.. .++..+++++.++|+|||.+++...+.. ...... ..+....
T Consensus 170 ~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~-------~~~~~~-~~l~~~~ 236 (336)
T 2b25_A 170 DFIHKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVNIT-------QVIELL-DGIRTCE 236 (336)
T ss_dssp EEEESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESSHH-------HHHHHH-HHHHHHT
T ss_pred EEEECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCCHH-------HHHHHH-HHHHhcC
Confidence 9999999886 45667899999843 3444589999999999999998774211 111111 1111110
Q ss_pred hcc--------CCCCC------CCHHHHHHHHHhCCCceEEEEecC
Q 017428 289 DAY--------YLPAW------CSTADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 289 ~~~--------~~~~~------~~~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
..+ ....| ....++.+.|+++||+++++....
T Consensus 237 ~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 237 LALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp CCEEEEEEECCCCCCEEECC--------------------------
T ss_pred CCcccceEEEecccceEEEeecccccchhhhhcccccccccccccc
Confidence 000 00111 111288999999999999887654
No 154
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.59 E-value=8.7e-15 Score=129.33 Aligned_cols=101 Identities=12% Similarity=0.121 Sum_probs=82.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCCCccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPDGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~fD~v~~ 232 (371)
++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.+.+.++.. .++.++.+|+.+. ++.+++||+|++
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 48899999999999999999986 379999999999888887777664 5799999999873 445688999998
Q ss_pred cccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
... .......++.++.++|||||++++..
T Consensus 154 ~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 154 DVA--QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp CCC--CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCC--CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 544 22223556889999999999999954
No 155
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.59 E-value=4.7e-15 Score=126.09 Aligned_cols=109 Identities=16% Similarity=0.012 Sum_probs=90.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEEcc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVWSM 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v~~~ 233 (371)
++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...++.++++++.+|+.+.. ..+++||+|++.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 3789999999999999998885346999999999999999999998887678999999987632 226789999998
Q ss_pred ccccCcCCHHHHHHHH--HHhcCCCcEEEEEeccCC
Q 017428 234 ESGEHMPDKSKFVSEL--ARVTAPAGTIIIVTWCHR 267 (371)
Q Consensus 234 ~~l~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~~~ 267 (371)
..++ ..+....++.+ .++|+|||.+++......
T Consensus 124 ~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 124 PPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp CCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 7743 45667778888 889999999999775443
No 156
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.58 E-value=1.5e-14 Score=126.14 Aligned_cols=125 Identities=16% Similarity=0.111 Sum_probs=103.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC-ccceEEcccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDG-QFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~fD~v~~~~~ 235 (371)
++.+|||||||+|.+++.++... ..+|+++|+++.+++.|+++++.+++.+++++..+|..+. ++.+ .||+|+...+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-FEETDQVSVITIAGM 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-CCGGGCCCEEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-cccCcCCCEEEEcCC
Confidence 47899999999999999999975 4589999999999999999999999988899999998652 2333 6999987654
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEE
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~ 315 (371)
-. .-...++.+....|+|+|++++.-. ...+.++++|.+.||.+++
T Consensus 94 Gg--~~i~~Il~~~~~~L~~~~~lVlq~~--------------------------------~~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 94 GG--RLIARILEEGLGKLANVERLILQPN--------------------------------NREDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp CH--HHHHHHHHHTGGGCTTCCEEEEEES--------------------------------SCHHHHHHHHHHTTEEEEE
T ss_pred Ch--HHHHHHHHHHHHHhCCCCEEEEECC--------------------------------CCHHHHHHHHHHCCCEEEE
Confidence 32 1257889999999999999998541 1466788999999999887
Q ss_pred EE
Q 017428 316 AE 317 (371)
Q Consensus 316 ~~ 317 (371)
..
T Consensus 140 e~ 141 (225)
T 3kr9_A 140 ES 141 (225)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 157
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.58 E-value=1.1e-14 Score=135.46 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=89.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccc---
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES--- 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~--- 235 (371)
+.+|||||||+|.++..+++....+|+|+|+| .+++.|+++++.+++.++++++.+|+.+.++++++||+|++..+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 78999999999999999988633489999999 59999999999999888899999999998877789999998754
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEE
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIII 261 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i 261 (371)
+.+......++.++.++|||||.++.
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 118 LLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 44446678999999999999999974
No 158
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.58 E-value=1.9e-14 Score=126.21 Aligned_cols=104 Identities=20% Similarity=0.299 Sum_probs=88.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CC---CCccceEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP---DGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~---~~~fD~v~ 231 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++...++.++++++++|+.+. + ++ .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 7899999999999999999986 5799999999999999999999999887899999998653 1 11 26799999
Q ss_pred ccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+... ..+...+++++.++|+|||++++.+..
T Consensus 139 ~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 7654 346678999999999999988887643
No 159
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.58 E-value=5.9e-15 Score=130.58 Aligned_cols=105 Identities=21% Similarity=0.366 Sum_probs=84.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH------cCCCCCeEEEEcCCCC-CC--CCCCcc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA------RGLADKVSFQVGDALQ-QP--FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~-~~--~~~~~f 227 (371)
++.+|||||||+|.++..+++.+ +..|+|+|+|+.|++.|+++++. .+. .|+.++++|+.+ ++ +++++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcCe
Confidence 36789999999999999999887 67999999999999999988764 344 589999999987 55 678999
Q ss_pred ceEEccccccCcCC--------HHHHHHHHHHhcCCCcEEEEEe
Q 017428 228 DLVWSMESGEHMPD--------KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 228 D~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|.|++...-.+... ...+++++.++|||||.|++..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99987543322211 1479999999999999999975
No 160
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.58 E-value=1.6e-14 Score=127.23 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=92.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.+..++..+...+ +.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...+ ++.+..+|+.+.
T Consensus 58 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~ 128 (231)
T 1vbf_A 58 LGIFMLDELDLHK-----GQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLG 128 (231)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGC
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccc
Confidence 4556666665554 789999999999999999987 5899999999999999999886654 799999999873
Q ss_pred CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
...+++||+|++..+++|+.+ ++.++|+|||++++....
T Consensus 129 ~~~~~~fD~v~~~~~~~~~~~------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 129 YEEEKPYDRVVVWATAPTLLC------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp CGGGCCEEEEEESSBBSSCCH------HHHHTEEEEEEEEEEECS
T ss_pred cccCCCccEEEECCcHHHHHH------HHHHHcCCCcEEEEEEcC
Confidence 334678999999999999863 688999999999998743
No 161
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.58 E-value=1.3e-14 Score=136.01 Aligned_cols=116 Identities=23% Similarity=0.264 Sum_probs=96.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
..+.++..+...+ +.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++.+++.++++++.+|+.+.
T Consensus 38 y~~~i~~~l~~~~-----~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 38 YQRAILQNHTDFK-----DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV 111 (348)
T ss_dssp HHHHHHHTGGGTT-----TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHhccccCC-----cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC
Confidence 3344555554433 789999999999999999886345999999996 8899999999999878999999999988
Q ss_pred CCCCCccceEEccccccCcC--CHHHHHHHHHHhcCCCcEEEEEe
Q 017428 221 PFPDGQFDLVWSMESGEHMP--DKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+++ ++||+|++..+++|+. +....+.++.++|||||.+++..
T Consensus 112 ~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 112 SLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 765 6899999998888774 45678889999999999998643
No 162
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.58 E-value=3.5e-15 Score=125.97 Aligned_cols=113 Identities=14% Similarity=0.116 Sum_probs=92.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC---CCCccceEEccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF---PDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~v~~~~ 234 (371)
++.+|||||||. +++|+|+.|++.|+++.. .++.+.++|+.++++ ++++||+|++..
T Consensus 12 ~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 12 AGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp TTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeEEEECC
Confidence 489999999996 239999999999998752 358999999998876 789999999999
Q ss_pred cccCc-CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCC
Q 017428 235 SGEHM-PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSL 311 (371)
Q Consensus 235 ~l~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF 311 (371)
+++|+ ++...++++++++|||||++++.+....... ... ...+.+++.++|+++||
T Consensus 72 ~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~------------------~~~---~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 72 VPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD------------------NNS---KVKTASKLCSALTLSGL 128 (176)
T ss_dssp STTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC------------------SSS---SSCCHHHHHHHHHHTTC
T ss_pred hhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc------------------ccc---ccCCHHHHHHHHHHCCC
Confidence 99999 8999999999999999999999654321100 001 13478999999999999
No 163
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.58 E-value=4.2e-16 Score=138.46 Aligned_cols=139 Identities=25% Similarity=0.290 Sum_probs=111.7
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..++.+++.++++|+.+.+ ++++||+|++...+++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 789999999999999999987 68999999999999999999999988678999999998876 5689999999999999
Q ss_pred cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHh--hccCCCCCCCHHHHHHHHHhCCCceEEE
Q 017428 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC--DAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 239 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 316 (371)
..+....+.+++++|+|||.+++... .... .....+.....+++..++...|...++.
T Consensus 157 ~~~~~~~~~~~~~~L~pgG~~i~~~~--------------------~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~ 216 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSPDGFEIFRLS--------------------KKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQ 216 (241)
T ss_dssp GGGGGSSSBCTTTSCSSCHHHHHHHH--------------------HHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEE
T ss_pred cchhhhHHHHHHhhcCCcceeHHHHH--------------------HhhCCceEEECCCCCCHHHHHHHhccCCCEEEEe
Confidence 87776678889999999998655321 0110 1112233457888888888888766654
Q ss_pred Eec
Q 017428 317 EDW 319 (371)
Q Consensus 317 ~~~ 319 (371)
...
T Consensus 217 ~~~ 219 (241)
T 3gdh_A 217 NFL 219 (241)
T ss_dssp EEE
T ss_pred hhh
Confidence 433
No 164
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.57 E-value=2.6e-15 Score=149.74 Aligned_cols=106 Identities=28% Similarity=0.342 Sum_probs=90.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMESG 236 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v~~~~~l 236 (371)
+.+|||||||+|.++..|++. |+.|+|||+|+.+++.|+..+...+. .+++|.+++++++ .+++++||+|++..++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 689999999999999999997 99999999999999999999887763 3699999999887 4567899999999999
Q ss_pred cCcCCHHH--HHHHHHHhcCCCcEEEEEeccC
Q 017428 237 EHMPDKSK--FVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 237 ~~~~~~~~--~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
+|++++.. .+..+.+.|+++|..++.....
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99988753 3556777888888877766543
No 165
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.57 E-value=1.5e-14 Score=127.21 Aligned_cols=126 Identities=12% Similarity=0.065 Sum_probs=103.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||||||+|.+++.+++.. ..+|+++|+++.+++.|+++++.+++.+++.+..+|..+...++++||+|++..+.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 47899999999999999999875 35799999999999999999999999888999999988765444469998875443
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEE
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 316 (371)
. .-...++.+..+.|+++|+|++.-. ...+.++++|.+.||.+++.
T Consensus 101 g--~lI~~IL~~~~~~L~~~~~lIlq~~--------------------------------~~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 101 G--TLIRTILEEGAAKLAGVTKLILQPN--------------------------------IAAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp H--HHHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHHHHHHHHTEEEEEE
T ss_pred h--HHHHHHHHHHHHHhCCCCEEEEEcC--------------------------------CChHHHHHHHHHCCCEEEEE
Confidence 2 2356789999999999999999741 14667889999999997664
Q ss_pred E
Q 017428 317 E 317 (371)
Q Consensus 317 ~ 317 (371)
.
T Consensus 147 ~ 147 (244)
T 3gnl_A 147 A 147 (244)
T ss_dssp E
T ss_pred E
Confidence 3
No 166
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=6.9e-15 Score=127.15 Aligned_cols=105 Identities=11% Similarity=0.023 Sum_probs=88.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCCCCccceEEcccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~l~ 237 (371)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++ ++++++++|+.+ ++...++||+|++...+
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~- 132 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF- 132 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS-
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC-
Confidence 689999999999999988776435999999999999999999999887 689999999877 35556789999987764
Q ss_pred CcCCHHHHHHHHHH--hcCCCcEEEEEecc
Q 017428 238 HMPDKSKFVSELAR--VTAPAGTIIIVTWC 265 (371)
Q Consensus 238 ~~~~~~~~l~~~~~--~LkpgG~l~i~~~~ 265 (371)
+..+...+++.+.+ +|+|||.+++....
T Consensus 133 ~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 RRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp STTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 45677888888876 59999999987643
No 167
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=5.3e-15 Score=133.36 Aligned_cols=104 Identities=17% Similarity=0.240 Sum_probs=85.3
Q ss_pred CCEEEEECCCcCh----HHHHHHHHcC-----CEEEEEeCCHHHHHHHHHHHHH-----------------------cC-
Q 017428 159 PKNVVDVGCGIGG----SSRYLAKKFG-----AKCQGITLSPVQAQRANALAAA-----------------------RG- 205 (371)
Q Consensus 159 ~~~VLDlG~GtG~----~~~~l~~~~~-----~~v~gvD~s~~~~~~a~~~~~~-----------------------~~- 205 (371)
+.+|||+|||||. +++.+++.++ .+|+|+|+|+.+++.|++.+.. .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 6799999999998 6666776543 5899999999999999986310 00
Q ss_pred ------CCCCeEEEEcCCCCCCCC-CCccceEEccccccCcCCH--HHHHHHHHHhcCCCcEEEEE
Q 017428 206 ------LADKVSFQVGDALQQPFP-DGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 206 ------~~~~v~~~~~d~~~~~~~-~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~ 262 (371)
+..+|.|.+.|+.+.+++ .++||+|+|.++++|+++. .+++++++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013699999999886665 5789999999999999765 79999999999999999984
No 168
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.57 E-value=9.6e-15 Score=129.86 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=91.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCC-----CCccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP-----DGQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~-----~~~fD~v 230 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++++|+.+. +.. .++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 6899999999999999999976 5799999999999999999999999988999999998764 211 4789999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCC
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRD 268 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 268 (371)
++... ..+...+++++.++|||||+|++.+.....
T Consensus 141 ~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 141 FIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 98654 356778999999999999999998765443
No 169
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.56 E-value=1.8e-14 Score=132.40 Aligned_cols=138 Identities=16% Similarity=0.221 Sum_probs=103.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEcCCCCCCC--CCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA---RGLADKVSFQVGDALQQPF--PDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~--~~~~fD~v~~ 232 (371)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.. ....++++++.+|+.+... ++++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 6899999999999999999865 56999999999999999998742 2223689999999877542 4688999999
Q ss_pred cccccCcCCH----HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 017428 233 MESGEHMPDK----SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS 308 (371)
Q Consensus 233 ~~~l~~~~~~----~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 308 (371)
.....+.+.. ..++++++++|||||++++...+.. .. ......+.+.|++
T Consensus 176 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~--------~~------------------~~~~~~~~~~l~~ 229 (304)
T 3bwc_A 176 DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW--------LD------------------LELIEKMSRFIRE 229 (304)
T ss_dssp ECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT--------TC------------------HHHHHHHHHHHHH
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc--------cc------------------hHHHHHHHHHHHh
Confidence 7655443322 5899999999999999999752210 00 0135678889999
Q ss_pred CCCceEEEEecCCc
Q 017428 309 LSLEDIKAEDWSQN 322 (371)
Q Consensus 309 aGF~~v~~~~~~~~ 322 (371)
+||..+.......+
T Consensus 230 ~GF~~v~~~~~~vP 243 (304)
T 3bwc_A 230 TGFASVQYALMHVP 243 (304)
T ss_dssp HTCSEEEEEECCCT
T ss_pred CCCCcEEEEEeecc
Confidence 99998887665444
No 170
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.56 E-value=2.1e-14 Score=129.91 Aligned_cols=154 Identities=11% Similarity=0.061 Sum_probs=102.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~ 219 (371)
.+..++..+.+.. ++.+|||||||||.++..+++....+|+|+|+|+.|++.+.+. .+++... ..++..
T Consensus 72 Kl~~~l~~~~~~~----~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~ 141 (291)
T 3hp7_A 72 KLEKALAVFNLSV----EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRY 141 (291)
T ss_dssp HHHHHHHHTTCCC----TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGG
T ss_pred HHHHHHHhcCCCc----cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CcccceecccCcee
Confidence 4556666666543 4789999999999999999887335999999999999885432 1344332 334443
Q ss_pred CC---CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCC-C-
Q 017428 220 QP---FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYL-P- 294 (371)
Q Consensus 220 ~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 294 (371)
++ ++..+||+|++..+++++ ..++.+++++|||||.+++..- +.+........ ..+. .
T Consensus 142 l~~~~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvk--Pqfe~~~~~~~------------~~G~vrd 204 (291)
T 3hp7_A 142 AEPVDFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALVK--PQFEAGREQIG------------KNGIVRE 204 (291)
T ss_dssp CCGGGCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEEC--GGGTSCGGGCC-------------CCCCCC
T ss_pred cchhhCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEEC--cccccChhhcC------------CCCccCC
Confidence 32 344569999988877654 6789999999999999999731 11100000000 0000 0
Q ss_pred ---CCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 295 ---AWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 295 ---~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
+....+++.++++++||.+..+.....
T Consensus 205 ~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi 234 (291)
T 3hp7_A 205 SSIHEKVLETVTAFAVDYGFSVKGLDFSPI 234 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEECCC
Confidence 013578899999999999888766443
No 171
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.56 E-value=2.5e-14 Score=126.30 Aligned_cols=104 Identities=22% Similarity=0.314 Sum_probs=91.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCC--CCccceEEccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP--DGQFDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~--~~~fD~v~~~~ 234 (371)
+.+|||+|||+|..+..+++.+ +.+|+++|+++.+++.|++++...++.+++.+..+|+.+. +.. +++||+|++..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 7899999999999999999987 6899999999999999999999988877899999998774 322 57899999876
Q ss_pred cccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
.. .+...+++++.++|+|||.+++.++.
T Consensus 135 ~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 135 AK---GQYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp GG---SCHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CH---HHHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 64 47789999999999999999997643
No 172
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.55 E-value=2.4e-14 Score=135.20 Aligned_cols=113 Identities=19% Similarity=0.191 Sum_probs=92.8
Q ss_pred HHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC--CeEEEEcCCCCCC
Q 017428 145 TLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD--KVSFQVGDALQQP 221 (371)
Q Consensus 145 ~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~v~~~~~d~~~~~ 221 (371)
++..+... ++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++..+++.. +++|...|+.+ +
T Consensus 214 ll~~l~~~-----~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~ 287 (375)
T 4dcm_A 214 FMQHLPEN-----LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-G 287 (375)
T ss_dssp HHHTCCCS-----CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-T
T ss_pred HHHhCccc-----CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-c
Confidence 35555443 36899999999999999999987 7899999999999999999999887643 58899999987 4
Q ss_pred CCCCccceEEccccccCcCC-----HHHHHHHHHHhcCCCcEEEEEe
Q 017428 222 FPDGQFDLVWSMESGEHMPD-----KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+++++||+|+++..+++... ...+++++.++|||||.++++.
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 56789999999988875322 2478999999999999999976
No 173
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.55 E-value=2.6e-14 Score=132.01 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=101.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccc-
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME- 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~- 234 (371)
++.+|||+|||+|..+..+++.+ +.+|+++|+|+.+++.++++++..++. ++.++++|+.+++..+++||+|++..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEEEeCC
Confidence 38899999999999999999876 379999999999999999999998884 79999999988754457899999742
Q ss_pred -----cccCcCCH----------------HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCC
Q 017428 235 -----SGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYL 293 (371)
Q Consensus 235 -----~l~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (371)
++.+.++. ..+++++.++|||||++++.+.+...
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~------------------------- 251 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP------------------------- 251 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG-------------------------
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh-------------------------
Confidence 23322221 48899999999999999997743211
Q ss_pred CCCCCHHHHHHHHHhCCCceEEEE
Q 017428 294 PAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 294 ~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
--..+.+..++++.||+.+.+.
T Consensus 252 --~Ene~~v~~~l~~~~~~~~~~~ 273 (315)
T 1ixk_A 252 --EENEFVIQWALDNFDVELLPLK 273 (315)
T ss_dssp --GGTHHHHHHHHHHSSEEEECCC
T ss_pred --HHhHHHHHHHHhcCCCEEecCC
Confidence 0134456677888888776543
No 174
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.55 E-value=3e-14 Score=129.32 Aligned_cols=113 Identities=16% Similarity=0.238 Sum_probs=96.4
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-C-CCCCeEEEEcCC
Q 017428 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-G-LADKVSFQVGDA 217 (371)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~-~~~~v~~~~~d~ 217 (371)
...++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|+++++.. + +.+++.+..+|+
T Consensus 88 ~~~i~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 88 AAQIVHEGDIFP-----GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred HHHHHHHcCCCC-----CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 345566666554 8899999999999999999875 579999999999999999999877 4 446899999999
Q ss_pred CCCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 218 LQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 218 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.+.++++++||+|++ +++++..+++++.++|+|||++++...
T Consensus 163 ~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 163 ADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred HhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 888777789999997 345777899999999999999999874
No 175
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=1.9e-14 Score=129.43 Aligned_cols=106 Identities=15% Similarity=0.220 Sum_probs=89.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEcCCCCC-------CCCCCc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA---RGLADKVSFQVGDALQQ-------PFPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~-------~~~~~~ 226 (371)
++.+|||+|||+|.++..++++. +.+|+|+|+++.+++.|++++.. .++.+++.++.+|+.+. ++++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 37899999999999999999987 57999999999999999999887 77766799999999886 255789
Q ss_pred cceEEccccccCc------------------CCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 227 FDLVWSMESGEHM------------------PDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 227 fD~v~~~~~l~~~------------------~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
||+|+++-.+... .+...+++.+.++|||||++++..
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999997333221 236789999999999999999864
No 176
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.54 E-value=1.2e-13 Score=122.99 Aligned_cols=110 Identities=13% Similarity=0.141 Sum_probs=94.7
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 017428 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF 222 (371)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 222 (371)
..++..+.+.+ +.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++....++.+++.+...|+.+...
T Consensus 81 ~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 81 FYIALKLNLNK-----EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV 154 (248)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC
T ss_pred HHHHHhcCCCC-----CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc
Confidence 34555555554 889999999999999999998 889999999999999999999988887789999999987543
Q ss_pred CCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 223 PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 223 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
++++||+|++ +.+++..+++++.++|+|||.+++..
T Consensus 155 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 155 PEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp CTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred CCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 5678999997 34577789999999999999999987
No 177
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.54 E-value=8.2e-14 Score=122.34 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=87.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCCCCCCccceEE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPDGQFDLVW 231 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~fD~v~ 231 (371)
++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...++ ..++.+..+|+...+..+++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 478999999999999999998763 6999999999999999999887653 3589999999987655567899999
Q ss_pred ccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+...++++. +++.++|||||++++...
T Consensus 157 ~~~~~~~~~------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 157 VGAAAPVVP------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp ECSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred ECCchHHHH------HHHHHhcCCCcEEEEEEe
Confidence 998887664 588999999999999764
No 178
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.54 E-value=2e-13 Score=119.85 Aligned_cols=136 Identities=15% Similarity=0.155 Sum_probs=95.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEE
Q 017428 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVW 231 (371)
Q Consensus 157 ~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~ 231 (371)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++...+..+.. .|+.++++|+.... ...++||+|+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEEE
Confidence 459999999999999999999876 469999999999876554444432 48999999997642 1246899999
Q ss_pred ccccccCcCCHHHH-HHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC
Q 017428 232 SMESGEHMPDKSKF-VSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS 310 (371)
Q Consensus 232 ~~~~l~~~~~~~~~-l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 310 (371)
+.... ++...+ ...+.++|||||+|++....... .. ....--..++..+.|+++|
T Consensus 152 ~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~----------------d~-----t~~~~e~~~~~~~~L~~~g 207 (232)
T 3id6_C 152 VDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSI----------------DV-----TKDPKEIYKTEVEKLENSN 207 (232)
T ss_dssp ECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC----------------------------CCSSSSTTHHHHHHHHTT
T ss_pred ecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCc----------------cc-----CCCHHHHHHHHHHHHHHCC
Confidence 87543 555444 45666799999999997421100 00 0000112245667888999
Q ss_pred CceEEEEec
Q 017428 311 LEDIKAEDW 319 (371)
Q Consensus 311 F~~v~~~~~ 319 (371)
|+.++....
T Consensus 208 f~~~~~~~l 216 (232)
T 3id6_C 208 FETIQIINL 216 (232)
T ss_dssp EEEEEEEEC
T ss_pred CEEEEEecc
Confidence 999887654
No 179
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.54 E-value=1.7e-14 Score=128.97 Aligned_cols=121 Identities=15% Similarity=0.129 Sum_probs=91.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHH--c-CCEEEEEeCCHHHHHHHHHHHHHc---CCCCC---
Q 017428 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKK--F-GAKCQGITLSPVQAQRANALAAAR---GLADK--- 209 (371)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~--~-~~~v~gvD~s~~~~~~a~~~~~~~---~~~~~--- 209 (371)
..++..++..+... ++.+|||+|||+|.++..+++. . +.+|+|+|+|+.+++.|++++... ++..+
T Consensus 37 ~~l~~~~l~~~~~~-----~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~ 111 (250)
T 1o9g_A 37 TEIFQRALARLPGD-----GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELE 111 (250)
T ss_dssp HHHHHHHHHTSSCC-----SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHH
T ss_pred HHHHHHHHHhcccC-----CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchh
Confidence 34555566544322 3689999999999999999987 4 578999999999999999887654 33212
Q ss_pred ----------------------eE-------------EEEcCCCCCCC-----CCCccceEEccccccCcCC--------
Q 017428 210 ----------------------VS-------------FQVGDALQQPF-----PDGQFDLVWSMESGEHMPD-------- 241 (371)
Q Consensus 210 ----------------------v~-------------~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~~~-------- 241 (371)
++ +.++|+.+... ..++||+|+++..+.+..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~ 191 (250)
T 1o9g_A 112 RREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQ 191 (250)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHH
T ss_pred hhhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccccccccccc
Confidence 56 99999877421 3458999999876655433
Q ss_pred -HHHHHHHHHHhcCCCcEEEEEec
Q 017428 242 -KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 242 -~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
...+++++.++|+|||+++++..
T Consensus 192 ~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 192 PVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHHHHhcCCCcEEEEeCc
Confidence 35899999999999999999553
No 180
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.54 E-value=5.1e-14 Score=124.56 Aligned_cols=111 Identities=21% Similarity=0.341 Sum_probs=91.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
+...++..+.+.+ +.+|||||||+|.++..+++..+.+|+++|+++.+++.|++++...++. ++.+..+|+ ..
T Consensus 79 ~~~~~~~~l~~~~-----~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~-~~ 151 (235)
T 1jg1_A 79 MVAIMLEIANLKP-----GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDG-SK 151 (235)
T ss_dssp HHHHHHHHHTCCT-----TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCG-GG
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCc-cc
Confidence 4445555555544 7899999999999999999986579999999999999999999988874 699999997 33
Q ss_pred CCCC-CccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 221 PFPD-GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 221 ~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
++++ .+||+|++..+++++.+ ++.+.|+|||++++...
T Consensus 152 ~~~~~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 152 GFPPKAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CCGGGCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEEC
T ss_pred CCCCCCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEe
Confidence 4444 35999999999988764 78899999999999764
No 181
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.54 E-value=2.8e-14 Score=123.98 Aligned_cols=103 Identities=23% Similarity=0.326 Sum_probs=88.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v~~~~~ 235 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+|+.+++.|+++++..++.++++++.+|+.+. +..++ ||+|++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~- 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC- 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET-
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC-
Confidence 6799999999999999999876 5799999999999999999999888777899999998663 43346 99999873
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
...+...+++++.++|||||.+++.+..
T Consensus 135 --~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 135 --DVFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp --TTSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred --ChhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 2457789999999999999999986643
No 182
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.53 E-value=3e-14 Score=125.04 Aligned_cols=105 Identities=17% Similarity=0.232 Sum_probs=89.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CCC----CccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FPD----GQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~----~~fD~v 230 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++++|+.+. + +.. ++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 7899999999999999999876 5799999999999999999999999887899999998653 2 111 789999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
++... ..+...+++++.++|||||++++.+...
T Consensus 145 ~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 145 YIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 96543 3567889999999999999999977543
No 183
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.53 E-value=3.4e-14 Score=138.30 Aligned_cols=117 Identities=23% Similarity=0.265 Sum_probs=96.1
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
..+.+.++..+... ++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.++++++.+|+.
T Consensus 144 ~~~~~~il~~l~~~-----~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 144 GTYQRAILQNHTDF-----KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHTGGGT-----TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHHhhhhc-----CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchh
Confidence 33455556555433 3789999999999999999885346999999998 99999999999998889999999999
Q ss_pred CCCCCCCccceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEE
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~ 262 (371)
+.+++ ++||+|++..+++|+.+ ....+.++.++|||||.+++.
T Consensus 218 ~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 87655 68999999888777743 466788899999999999853
No 184
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.52 E-value=9.4e-15 Score=122.28 Aligned_cols=103 Identities=14% Similarity=0.094 Sum_probs=85.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CC--CCccceEEccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP--DGQFDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~--~~~fD~v~~~~ 234 (371)
+.+|||+|||+|.++..+++. +..|+|+|+|+.+++.|++++...++ +++++.+|+.+. + .+ .++||+|++..
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 789999999999999999987 56799999999999999999988876 799999998763 2 11 24799999987
Q ss_pred cccCcCCHHHHHHHHH--HhcCCCcEEEEEeccC
Q 017428 235 SGEHMPDKSKFVSELA--RVTAPAGTIIIVTWCH 266 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 266 (371)
.++ .+...+++.+. ++|+|||.+++.....
T Consensus 119 ~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 765 55566777777 9999999999977544
No 185
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.52 E-value=4.8e-14 Score=125.75 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=89.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-C-----CCCccce
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-F-----PDGQFDL 229 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD~ 229 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++.+|+.+. + + ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 6799999999999999999986 5799999999999999999999988877899999998663 2 2 1578999
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|++... ..+...+++++.++|||||++++.+.
T Consensus 160 V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 160 IFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 998643 35678899999999999999998664
No 186
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.52 E-value=2.1e-13 Score=119.83 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=98.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~~ 232 (371)
++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.++++++.. +++.++.+|+.+.. ...++||+|++
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 47899999999999999999886 379999999999999998887653 58999999998732 12368999997
Q ss_pred cccccCcCCH-HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCC
Q 017428 233 MESGEHMPDK-SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSL 311 (371)
Q Consensus 233 ~~~l~~~~~~-~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF 311 (371)
... .++. ..+++++.++|||||++++. +....... ... ... ...+++.++ +++ |
T Consensus 150 ~~~---~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~---~~~--~~~--------------~~~~~l~~l-~~~-f 204 (227)
T 1g8a_A 150 DVA---QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDV---TKE--PEQ--------------VFREVEREL-SEY-F 204 (227)
T ss_dssp CCC---STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCT---TSC--HHH--------------HHHHHHHHH-HTT-S
T ss_pred CCC---CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCC---CCC--hhh--------------hhHHHHHHH-Hhh-c
Confidence 644 2344 35599999999999999998 32211100 000 001 135567666 777 9
Q ss_pred ceEEEEecC
Q 017428 312 EDIKAEDWS 320 (371)
Q Consensus 312 ~~v~~~~~~ 320 (371)
+.++.....
T Consensus 205 ~~~~~~~~~ 213 (227)
T 1g8a_A 205 EVIERLNLE 213 (227)
T ss_dssp EEEEEEECT
T ss_pred eeeeEeccC
Confidence 998877653
No 187
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.52 E-value=7.1e-14 Score=122.84 Aligned_cols=101 Identities=19% Similarity=0.135 Sum_probs=87.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCC----CC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQP----FP 223 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~------~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~----~~ 223 (371)
++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...++ ..++.+..+|+.+.. ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 478999999999999999998754 5999999999999999999988763 358999999998754 45
Q ss_pred CCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.++||+|++...++++ ++++.++|||||++++...
T Consensus 160 ~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 6789999999888875 4788999999999999764
No 188
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.52 E-value=2.6e-13 Score=127.51 Aligned_cols=117 Identities=20% Similarity=0.152 Sum_probs=97.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
+...++..+...+ +.+|||+|||+|.+++.++... ...|+|+|+++.+++.|+++++..++. ++++.++|+.
T Consensus 191 la~~l~~~~~~~~-----~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~ 264 (354)
T 3tma_A 191 LAQALLRLADARP-----GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADAR 264 (354)
T ss_dssp HHHHHHHHTTCCT-----TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGG
T ss_pred HHHHHHHHhCCCC-----CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChh
Confidence 4445556665554 7899999999999999999975 379999999999999999999999986 8999999999
Q ss_pred CCCCCCCccceEEccccccCcC--------CHHHHHHHHHHhcCCCcEEEEEe
Q 017428 219 QQPFPDGQFDLVWSMESGEHMP--------DKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~--------~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+++.+.+.||+|+++-.+.... ....+++++.++|||||.+++..
T Consensus 265 ~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 265 HLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred hCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9876677899999965443221 12678999999999999999976
No 189
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.51 E-value=1.1e-13 Score=123.28 Aligned_cols=105 Identities=23% Similarity=0.429 Sum_probs=84.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--------CCCCCeEEEEcCCCC-CC--CCCC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--------GLADKVSFQVGDALQ-QP--FPDG 225 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~-~~--~~~~ 225 (371)
++.+|||||||+|.++..+++.. +..|+|+|+|+.+++.|+++++.. ++ .++.++.+|+.+ ++ ++.+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhcccc
Confidence 46899999999999999999986 568999999999999999988765 66 589999999987 44 6678
Q ss_pred ccceEEccccccCcCCH--------HHHHHHHHHhcCCCcEEEEEe
Q 017428 226 QFDLVWSMESGEHMPDK--------SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 226 ~fD~v~~~~~l~~~~~~--------~~~l~~~~~~LkpgG~l~i~~ 263 (371)
++|.|++...-.+.... ..+++++.++|+|||.|++..
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 89999854321111000 489999999999999999964
No 190
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.51 E-value=5.7e-14 Score=117.86 Aligned_cols=96 Identities=22% Similarity=0.278 Sum_probs=83.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+|||+|||+|.++..+++.+ +.+|+|+|+++ +++. .++.+..+|+.+.+ +++++|
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 47899999999999999999986 47999999999 6532 47999999998876 667899
Q ss_pred ceEEccccccCcCCH-----------HHHHHHHHHhcCCCcEEEEEecc
Q 017428 228 DLVWSMESGEHMPDK-----------SKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 228 D~v~~~~~l~~~~~~-----------~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
|+|++...+++..+. ..+++++.++|+|||.+++..+.
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 999999888887665 68999999999999999997753
No 191
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.51 E-value=1.7e-13 Score=123.52 Aligned_cols=96 Identities=28% Similarity=0.403 Sum_probs=84.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++. .++.+..+|+.++++++++||+|++..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCCh
Confidence 37899999999999999999976 689999999999999998763 46899999999988888999999987653
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
. .++++.++|||||.+++.....
T Consensus 159 ~-------~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 C-------KAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp C-------CHHHHHHHEEEEEEEEEEEECT
T ss_pred h-------hHHHHHHhcCCCcEEEEEEcCH
Confidence 2 4799999999999999988654
No 192
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.50 E-value=6.3e-14 Score=123.27 Aligned_cols=100 Identities=18% Similarity=0.293 Sum_probs=85.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCCCCC-C
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG-------AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPD-G 225 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~-------~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~-~ 225 (371)
++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.|++++...+. ..++.+..+|+.+ ++++ +
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 162 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNA 162 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGC
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCC
Confidence 478999999999999999998664 5999999999999999999876541 2579999999887 4444 7
Q ss_pred ccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 226 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+||+|++...++++. +++.+.|||||++++...
T Consensus 163 ~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp SEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 899999999998875 688999999999999764
No 193
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.50 E-value=1.1e-13 Score=129.87 Aligned_cols=101 Identities=24% Similarity=0.234 Sum_probs=86.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcc---cc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM---ES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~---~~ 235 (371)
+++|||||||+|.++..+++....+|++||.|+ +++.|++.++.+++.++|.++.+|++++.++ ++||+|++- ..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 789999999999999887776335899999996 8899999999999999999999999998776 789999983 34
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEE
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIII 261 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i 261 (371)
+.+-.....++....++|||||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 44445678899999999999999874
No 194
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.50 E-value=6.8e-14 Score=130.91 Aligned_cols=102 Identities=22% Similarity=0.299 Sum_probs=88.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
+.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++...++ .+++..+|+.+.+ +++||+|+++..++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC--CSCEEEEEECCCCC
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc--cCCeeEEEECCCcc
Confidence 6799999999999999999986 46999999999999999999988876 3678899987653 67899999999887
Q ss_pred C-----cCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 238 H-----MPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 238 ~-----~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+ ..+...+++++.++|||||.+++...
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 5 24568899999999999999999864
No 195
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.49 E-value=1.1e-14 Score=128.60 Aligned_cols=155 Identities=13% Similarity=0.096 Sum_probs=93.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCC--CCeEEEE-cC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLA--DKVSFQV-GD 216 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~-~d 216 (371)
.+..++..+.+.. ++.+|||||||||.++..+++. + .+|+|+|+|+.|++.|+++....... .++.+.. .|
T Consensus 24 kL~~~L~~~~~~~----~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~ 98 (232)
T 3opn_A 24 KLEKALKEFHLEI----NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLAD 98 (232)
T ss_dssp HHHHHHHHTTCCC----TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGG
T ss_pred HHHHHHHHcCCCC----CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhH
Confidence 3455666665543 4679999999999999999987 5 49999999999999877642111000 0121111 12
Q ss_pred CCCCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCC--
Q 017428 217 ALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLP-- 294 (371)
Q Consensus 217 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (371)
+....+....||++++ ++ ..++++++++|||||.+++.. . +..... .. .........
T Consensus 99 ~~~~~~d~~~~D~v~~-----~l---~~~l~~i~rvLkpgG~lv~~~--~----p~~e~~----~~---~~~~~G~~~d~ 157 (232)
T 3opn_A 99 FEQGRPSFTSIDVSFI-----SL---DLILPPLYEILEKNGEVAALI--K----PQFEAG----RE---QVGKNGIIRDP 157 (232)
T ss_dssp CCSCCCSEEEECCSSS-----CG---GGTHHHHHHHSCTTCEEEEEE--C----HHHHSC----HH---HHC-CCCCCCH
T ss_pred cCcCCCCEEEEEEEhh-----hH---HHHHHHHHHhccCCCEEEEEE--C----cccccC----HH---HhCcCCeecCc
Confidence 2111112234444433 33 678999999999999999963 1 100000 00 000000000
Q ss_pred --CCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 295 --AWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 295 --~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
...+.+++.++++++||+++.+.....
T Consensus 158 ~~~~~~~~~l~~~l~~aGf~v~~~~~~pi 186 (232)
T 3opn_A 158 KVHQMTIEKVLKTATQLGFSVKGLTFSPI 186 (232)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEECSS
T ss_pred chhHHHHHHHHHHHHHCCCEEEEEEEccC
Confidence 013678999999999999888765433
No 196
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.49 E-value=1.1e-13 Score=128.48 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=87.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCC----CCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPF----PDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~----~~~~fD~v~~~ 233 (371)
+.+|||+|||+|.++..++.. +++|+++|+|+.+++.|+++++.+++.+ +++++++|+.+... ..++||+|++.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 689999999999999999986 6799999999999999999999888865 59999999877421 14689999984
Q ss_pred cc----------ccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 234 ES----------GEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 234 ~~----------l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
-. +.+..+...+++++.++|+|||.+++...+
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 32 122345678999999999999998876643
No 197
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.48 E-value=1.1e-13 Score=122.62 Aligned_cols=97 Identities=15% Similarity=0.225 Sum_probs=80.6
Q ss_pred CCEEEEECCCcChHHHHHHHH----c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCC-Cccce
Q 017428 159 PKNVVDVGCGIGGSSRYLAKK----F-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPD-GQFDL 229 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~----~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~-~~fD~ 229 (371)
+.+|||||||+|..+..+++. . +++|+|+|+|+.+++.|+. ..++++++++|+.+. +... .+||+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCCE
Confidence 679999999999999999987 2 6899999999999988762 236899999999884 4333 47999
Q ss_pred EEccccccCcCCHHHHHHHHHH-hcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELAR-VTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~-~LkpgG~l~i~~~ 264 (371)
|++... | .+...++.++.+ +|||||++++.+.
T Consensus 156 I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 156 IFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 997654 3 377889999997 9999999999764
No 198
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.47 E-value=1.6e-13 Score=121.24 Aligned_cols=105 Identities=19% Similarity=0.253 Sum_probs=89.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC----CCCC--CccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ----PFPD--GQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~--~~fD~v 230 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++...++.+++++..+|+.+. +..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 6799999999999999999876 4699999999999999999999888877899999997542 2223 789999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
++... ..+...+++++.++|+|||++++.+...
T Consensus 153 ~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 153 FIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 97654 3567889999999999999999976543
No 199
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.47 E-value=1.1e-12 Score=124.10 Aligned_cols=103 Identities=12% Similarity=-0.018 Sum_probs=86.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCC-CCCccceEEccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPF-PDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~~fD~v~~~~ 234 (371)
++.+|||+| |+|.++..++... ..+|+|+|+|+.+++.|+++++..++. +++++.+|+.+ ++. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEECC
Confidence 378999999 9999999998874 369999999999999999999988885 89999999988 553 356899999986
Q ss_pred cccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 235 SGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.++.. ....+++++.++|||||++++..
T Consensus 250 p~~~~-~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 250 PETLE-AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CSSHH-HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCchH-HHHHHHHHHHHHcccCCeEEEEE
Confidence 55433 35789999999999999654444
No 200
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.47 E-value=3.9e-14 Score=132.34 Aligned_cols=96 Identities=21% Similarity=0.265 Sum_probs=81.7
Q ss_pred CCEEEEECCC------cChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------C
Q 017428 159 PKNVVDVGCG------IGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP------D 224 (371)
Q Consensus 159 ~~~VLDlG~G------tG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~ 224 (371)
+.+||||||| +|..+..+++.+ +++|+|+|+|+.|.. ..++++|+++|+.++++. +
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhccc
Confidence 6899999999 788888887765 689999999999731 236899999999998766 6
Q ss_pred CccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 225 GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
++||+|++.. .+++.+...+|++++++|||||++++.++.
T Consensus 287 ~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 8999999864 466778899999999999999999998865
No 201
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.47 E-value=2.4e-13 Score=120.52 Aligned_cols=104 Identities=20% Similarity=0.285 Sum_probs=88.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C--------------
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-------------- 221 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------------- 221 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++...++.+++.+..+|+.+. +
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 7899999999999999999986 5799999999999999999999888866799999997652 1
Q ss_pred CCC--CccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 222 FPD--GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 222 ~~~--~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+++ ++||+|++... ..+...+++++.++|+|||++++.+..
T Consensus 141 f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp TCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 78999998754 346678999999999999999997643
No 202
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.46 E-value=5.1e-13 Score=126.28 Aligned_cols=126 Identities=26% Similarity=0.212 Sum_probs=101.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||+|||+|.+++.++... ..+|+|+|+|+.+++.|++++...++.+++++.++|+.++++++++||+|+++-.+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 37899999999999999999874 23899999999999999999999998778999999999988777899999997554
Q ss_pred cCc-------CC-HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 017428 237 EHM-------PD-KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS 308 (371)
Q Consensus 237 ~~~-------~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 308 (371)
... .+ ...+++++.++| ||.+++... +.+.+.+.+++
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---------------------------------~~~~~~~~~~~ 341 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---------------------------------EKKAIEEAIAE 341 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------------CHHHHHHHHHH
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------------CHHHHHHHHHH
Confidence 321 12 267888899988 566555441 45667788999
Q ss_pred CCCceEEEEe
Q 017428 309 LSLEDIKAED 318 (371)
Q Consensus 309 aGF~~v~~~~ 318 (371)
.||.......
T Consensus 342 ~G~~~~~~~~ 351 (373)
T 3tm4_A 342 NGFEIIHHRV 351 (373)
T ss_dssp TTEEEEEEEE
T ss_pred cCCEEEEEEE
Confidence 9999876544
No 203
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.46 E-value=2.1e-13 Score=120.76 Aligned_cols=103 Identities=18% Similarity=0.270 Sum_probs=88.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-C-----CCCccce
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-F-----PDGQFDL 229 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD~ 229 (371)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++.+|+.+. + + +.++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 6899999999999999999986 5799999999999999999999999877899999998663 2 2 2578999
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|++... ..+...+++++.++|+|||.+++.+.
T Consensus 151 I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 151 GFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 997642 24668899999999999999988664
No 204
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.46 E-value=3.2e-13 Score=122.81 Aligned_cols=101 Identities=23% Similarity=0.303 Sum_probs=84.2
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCcc---ceEEccc-
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQF---DLVWSME- 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f---D~v~~~~- 234 (371)
+.+|||+|||+|.++..++...+.+|+|+|+|+.+++.|+++++..++.++++|+++|+.+. ++ ++| |+|+++-
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNPP 201 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECCC
T ss_pred CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcCC
Confidence 67999999999999999988735799999999999999999999999876799999999873 33 579 9999972
Q ss_pred -----------cccCcCC--------HHHHHHHHH-HhcCCCcEEEEE
Q 017428 235 -----------SGEHMPD--------KSKFVSELA-RVTAPAGTIIIV 262 (371)
Q Consensus 235 -----------~l~~~~~--------~~~~l~~~~-~~LkpgG~l~i~ 262 (371)
+. |-+. ...+++++. +.|+|||++++.
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 22 2211 227899999 999999999984
No 205
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.45 E-value=3.9e-13 Score=118.15 Aligned_cols=104 Identities=16% Similarity=0.225 Sum_probs=88.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCC----CccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPD----GQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~----~~fD~v 230 (371)
+.+|||+|||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++.+|+.+. .+.. ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 7899999999999999999875 5799999999999999999999988878999999998653 1211 689999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
++... ..+...+++++.++|+|||.+++.+..
T Consensus 150 ~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 150 VVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 98654 346678999999999999999997643
No 206
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=2.5e-13 Score=122.86 Aligned_cols=102 Identities=20% Similarity=0.060 Sum_probs=89.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|+++++.+++. ++.++.+|+.+.+. .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCc-cCCceEEEECCcc
Confidence 47899999999999999999985 569999999999999999999999884 79999999988743 5789999987543
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+...++.++.+.|+|||++++..+.
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 5667899999999999999988754
No 207
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.45 E-value=4.2e-13 Score=115.45 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=77.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------------
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG---AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------------- 221 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------- 221 (371)
++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+ .. +++.+.++|+.+.+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC---------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhccccccccc
Confidence 378999999999999999999863 789999999831 12 47999999998876
Q ss_pred ------------CCCCccceEEccccccCcC----CH-------HHHHHHHHHhcCCCcEEEEEec
Q 017428 222 ------------FPDGQFDLVWSMESGEHMP----DK-------SKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 222 ------------~~~~~fD~v~~~~~l~~~~----~~-------~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+++++||+|++..++++.. +. ..+++++.++|||||.+++..+
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 5667999999987776642 22 2378999999999999998654
No 208
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.45 E-value=7.9e-13 Score=119.06 Aligned_cols=128 Identities=16% Similarity=0.069 Sum_probs=102.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.+++.++....++|+++|+++.+++.++++++.+++.+++.++.+|+.+.+ ..+.||.|++...
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p-- 201 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV-- 201 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC--
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC--
Confidence 4899999999999999999987457999999999999999999999999889999999998875 3578999987643
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceE
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 314 (371)
+....++..+.++|||||+|.+.++...... .-...+.++++.++.|+.+.
T Consensus 202 --~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~------------------------~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 --VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM------------------------PREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------------------------TTTTHHHHHHHHHHTTCEEE
T ss_pred --CcHHHHHHHHHHHcCCCCEEEEEeeeccccc------------------------chhHHHHHHHHHHHcCCcEE
Confidence 2334678888899999999988765322110 01235677888899999754
No 209
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.44 E-value=1.9e-12 Score=125.39 Aligned_cols=107 Identities=21% Similarity=0.311 Sum_probs=90.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEc-
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWS- 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~- 232 (371)
++.+|||+|||+|..+..+++.. + ..|+++|+++.+++.++++++..|+ .++.+..+|+.+.+ +++++||+|++
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 37899999999999999999976 3 7999999999999999999999887 47999999998875 55578999996
Q ss_pred -----cccccCcCCH----------------HHHHHHHHHhcCCCcEEEEEecc
Q 017428 233 -----MESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 233 -----~~~l~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
..++.+.++. ..+++++.++|||||.|++.+.+
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2344444443 57899999999999999998754
No 210
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.42 E-value=5.5e-13 Score=120.72 Aligned_cols=107 Identities=11% Similarity=0.110 Sum_probs=89.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCccceEE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVW 231 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~v~ 231 (371)
++.+|||+|||+|..+..+++.. + .+|+++|+++.+++.++++++..++. ++.++.+|+.+.+. ..++||+|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCEEE
Confidence 38899999999999999999876 4 79999999999999999999999885 89999999877643 257899999
Q ss_pred ccccccC------------------cCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 232 SMESGEH------------------MPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 232 ~~~~l~~------------------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+.-.... ......+++++.++|||||.+++.+.+
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 8622211 134578999999999999999998754
No 211
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.40 E-value=4.7e-13 Score=121.84 Aligned_cols=88 Identities=24% Similarity=0.308 Sum_probs=74.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.++.++..+...+ +.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++...+..++++++.+|+.+.
T Consensus 16 i~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 16 IINSIIDKAALRP-----TDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHTCCCT-----TCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 5666777776654 789999999999999999998 6799999999999999999987666556899999999887
Q ss_pred CCCCCccceEEccccc
Q 017428 221 PFPDGQFDLVWSMESG 236 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l 236 (371)
+++ .||+|+++..+
T Consensus 90 ~~~--~fD~vv~nlpy 103 (285)
T 1zq9_A 90 DLP--FFDTCVANLPY 103 (285)
T ss_dssp CCC--CCSEEEEECCG
T ss_pred cch--hhcEEEEecCc
Confidence 654 79999986443
No 212
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.39 E-value=6.6e-13 Score=121.15 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=82.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC----CCCCeEEEEcCCCCC-CCCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG----LADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~-~~~~~~fD~v~~ 232 (371)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...+ -.++++++.+|+.+. ...+++||+|++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 6899999999999999999865 4789999999999999999876542 135899999998774 334688999998
Q ss_pred cccccCcCCH----HHHHHHHHHhcCCCcEEEEEe
Q 017428 233 MESGEHMPDK----SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 233 ~~~l~~~~~~----~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.......+.. ..++++++++|+|||++++..
T Consensus 164 D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 5443222221 679999999999999999975
No 213
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.39 E-value=1.1e-11 Score=107.19 Aligned_cols=127 Identities=12% Similarity=-0.043 Sum_probs=96.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..+++....+|+|+|+++.+++.+++++...++ ++.++.+|+.+++ ++||+|+++..++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 3789999999999999999887334799999999999999999887776 7999999998864 5899999988776
Q ss_pred CcC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEE
Q 017428 238 HMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (371)
Q Consensus 238 ~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~ 315 (371)
+.. ....+++++.+++ ||.+++. ... . .+.+.+.+.+++.||+...
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~-~~~--------------~---------------~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIH-LAK--------------P---------------EVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEE-ECC--------------H---------------HHHHHHHHHHHHTTEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEE-eCC--------------c---------------CCHHHHHHHHHHCCCeEEE
Confidence 663 3367889999988 5544332 100 0 0234466788999998766
Q ss_pred EEecCC
Q 017428 316 AEDWSQ 321 (371)
Q Consensus 316 ~~~~~~ 321 (371)
+.....
T Consensus 172 ~~~~~~ 177 (207)
T 1wy7_A 172 RLTTKI 177 (207)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 655443
No 214
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.37 E-value=2.7e-12 Score=109.79 Aligned_cols=107 Identities=19% Similarity=0.234 Sum_probs=79.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.+.++++...+-. ++.+|||+|||+|.++..+++. +.+|+|+|+++.. .+ +++.++++|+.+.
T Consensus 12 KL~ei~~~~~~~~----~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~ 74 (191)
T 3dou_A 12 KLEFLLDRYRVVR----KGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI-AGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHHHCCSC----TTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC-TTCEEEECCTTSS
T ss_pred HHHHHHHHcCCCC----CCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC-CCeEEEEccccCH
Confidence 3445555554322 4899999999999999999988 8899999999842 12 5899999999886
Q ss_pred CCC-------C----CccceEEccccccCcC----C-------HHHHHHHHHHhcCCCcEEEEEec
Q 017428 221 PFP-------D----GQFDLVWSMESGEHMP----D-------KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 221 ~~~-------~----~~fD~v~~~~~l~~~~----~-------~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+.. . ++||+|++........ + ...+++.+.++|||||.+++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 421 1 4899999865432211 1 24678899999999999998765
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.37 E-value=1.8e-12 Score=120.21 Aligned_cols=105 Identities=21% Similarity=0.342 Sum_probs=84.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC--CCCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ--PFPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~~~~~fD~v~~ 232 (371)
+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+. ..++++||+|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 6899999999999999999865 579999999999999999987652 33 35899999998763 234578999998
Q ss_pred cccc--cCcCC--HHHHHHHHHHhcCCCcEEEEEe
Q 017428 233 MESG--EHMPD--KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 233 ~~~l--~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.... +...+ ...+++++.++|+|||++++..
T Consensus 201 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 201 DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 5432 11111 3689999999999999999963
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.36 E-value=1.8e-12 Score=118.49 Aligned_cols=105 Identities=19% Similarity=0.245 Sum_probs=84.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v~~~~~ 235 (371)
+.+|||||||+|.++..+++.+ +.+|++||+++.+++.|++++.... .++++++++|+.+. .+++++||+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 3599999999999999999976 6799999999999999999875322 36899999998764 344688999998643
Q ss_pred ccCc-CC---HHHHHHHHHHhcCCCcEEEEEec
Q 017428 236 GEHM-PD---KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 236 l~~~-~~---~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.+.. +. ...++++++++|+|||++++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3221 11 26899999999999999998764
No 217
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.35 E-value=1.9e-12 Score=124.67 Aligned_cols=106 Identities=12% Similarity=0.119 Sum_probs=87.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEcc-
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSM- 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~- 233 (371)
++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.++++++..|+. +.++.+|+.+++ +..++||+|++.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEEECC
Confidence 48999999999999999999886 369999999999999999999999984 999999987764 235789999952
Q ss_pred -----ccccCcCCH----------------HHHHHHHHHhcCCCcEEEEEecc
Q 017428 234 -----ESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 234 -----~~l~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
.++..-++. ..+++++.++|||||+|++++.+
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 222222221 67899999999999999998754
No 218
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.35 E-value=5.9e-12 Score=107.71 Aligned_cols=95 Identities=22% Similarity=0.331 Sum_probs=75.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCCC-----
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG----------AKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQQP----- 221 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~----- 221 (371)
++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+ .+ .++.+. .+|+.+.+
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHHH
Confidence 478999999999999999999864 789999999832 12 478899 99987643
Q ss_pred ---CCCCccceEEccccccCc----CCH-------HHHHHHHHHhcCCCcEEEEEec
Q 017428 222 ---FPDGQFDLVWSMESGEHM----PDK-------SKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 222 ---~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+++++||+|++...++.. .+. ..+++++.++|||||.+++..+
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 345689999986654432 222 4789999999999999999875
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.34 E-value=2.1e-12 Score=118.43 Aligned_cols=106 Identities=19% Similarity=0.249 Sum_probs=83.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~-~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++.. .++ .++++++.+|+.+. +..+++||+|++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 6899999999999999999865 47999999999999999998765 233 46899999998652 3346889999985
Q ss_pred ccccCcC----CHHHHHHHHHHhcCCCcEEEEEec
Q 017428 234 ESGEHMP----DKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 234 ~~l~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
......+ ....+++++.++|+|||++++...
T Consensus 176 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 176 SSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp CC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 4332211 125689999999999999998763
No 220
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.34 E-value=1.7e-11 Score=114.64 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=87.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-C-----CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-G-----AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~-----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 232 (371)
+.+|||+|||+|.++..+++.. . .+++|+|+++.+++.|+.++...++ ++.+..+|..... +.++||+|++
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-~~~~fD~Ii~ 207 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-LVDPVDVVIS 207 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-CCCCEEEEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-ccCCccEEEE
Confidence 6899999999999999998876 2 6899999999999999999887776 6889999987643 4578999999
Q ss_pred cccccCcCCH------------------HHHHHHHHHhcCCCcEEEEEec
Q 017428 233 MESGEHMPDK------------------SKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 233 ~~~l~~~~~~------------------~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+-.+++++.. ..+++++.+.|+|||+++++..
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 8776655332 2589999999999999999874
No 221
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.34 E-value=1.1e-11 Score=106.52 Aligned_cols=87 Identities=16% Similarity=0.168 Sum_probs=70.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++. +++++++|+.+++ ++||+|+++..++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNPPFG 121 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECCCC-
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECCCch
Confidence 378999999999999999988622479999999999999998753 6899999998864 7899999999998
Q ss_pred CcCC--HHHHHHHHHHhc
Q 017428 238 HMPD--KSKFVSELARVT 253 (371)
Q Consensus 238 ~~~~--~~~~l~~~~~~L 253 (371)
++.+ ...+++++.+++
T Consensus 122 ~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 122 SVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp ------CHHHHHHHHHHE
T ss_pred hccCchhHHHHHHHHHhc
Confidence 8854 257899999988
No 222
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.33 E-value=1.2e-11 Score=120.01 Aligned_cols=108 Identities=17% Similarity=0.216 Sum_probs=88.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEcc-
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSM- 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~- 233 (371)
++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.++++++..|+. ++.++.+|+.+++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECC
Confidence 38899999999999999999986 379999999999999999999998884 79999999988653 45789999972
Q ss_pred -----ccccCcCC----------------HHHHHHHHHHhcCCCcEEEEEeccC
Q 017428 234 -----ESGEHMPD----------------KSKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 234 -----~~l~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
.++.+.++ ...++.++.++|||||+|++.+.+.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 22222222 2468999999999999999987543
No 223
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.33 E-value=6.9e-13 Score=122.09 Aligned_cols=104 Identities=19% Similarity=0.257 Sum_probs=81.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC-CCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. +..+++||+|++.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 6899999999999999999865 579999999999999999987543 23 46899999998663 2345789999985
Q ss_pred ccccCcC-CH----HHHHHHHHHhcCCCcEEEEEe
Q 017428 234 ESGEHMP-DK----SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 234 ~~l~~~~-~~----~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.. .++. .. ..+++++.++|+|||++++..
T Consensus 189 ~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 189 SS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred CC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 43 2221 11 688999999999999999865
No 224
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.33 E-value=2.7e-12 Score=123.50 Aligned_cols=107 Identities=17% Similarity=0.168 Sum_probs=87.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~ 234 (371)
++.+|||+|||+|..+..+++.. ...|+++|+++.+++.++++++..|+. ++.+...|+.+++ ..+++||+|++.-
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccccCCEEEECC
Confidence 48999999999999999999876 369999999999999999999999984 7999999987754 2357899999732
Q ss_pred c------ccCcCCH----------------HHHHHHHHHhcCCCcEEEEEecc
Q 017428 235 S------GEHMPDK----------------SKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 235 ~------l~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
- +..-++. ..++.++.++|||||.|+.++.+
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 2 2111111 27899999999999999998754
No 225
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.33 E-value=6e-13 Score=119.56 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=75.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH-HHcCCCCCeEEE--EcCCCCCCCCCCccceEEccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALA-AARGLADKVSFQ--VGDALQQPFPDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~~~~~~fD~v~~~~ 234 (371)
++.+|||||||+|.++..+++. .+|+|||+++ |+..+++.. .......++.++ ++|+.+++ +++||+|++..
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~ 148 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDV 148 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeC
Confidence 4889999999999999999886 6899999999 532221110 000011168899 99998865 68899999987
Q ss_pred cccCcCCH----H---HHHHHHHHhcCCCc--EEEEEecc
Q 017428 235 SGEHMPDK----S---KFVSELARVTAPAG--TIIIVTWC 265 (371)
Q Consensus 235 ~l~~~~~~----~---~~l~~~~~~LkpgG--~l~i~~~~ 265 (371)
+ ++..++ . .+++.+.++||||| .+++..+.
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 6 444432 1 37899999999999 99987654
No 226
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.33 E-value=1.5e-12 Score=120.17 Aligned_cols=105 Identities=20% Similarity=0.225 Sum_probs=85.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cC-C-CCCeEEEEcCCCCC-CCCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RG-L-ADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~-~-~~~v~~~~~d~~~~-~~~~~~fD~v~~ 232 (371)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.. .+ + .++++++.+|+.+. +..+++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 6899999999999999999865 57999999999999999998764 22 2 36899999998763 334678999998
Q ss_pred cccccC---cC--C--HHHHHHHHHHhcCCCcEEEEEe
Q 017428 233 MESGEH---MP--D--KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 233 ~~~l~~---~~--~--~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
....+. -+ . ...++++++++|+|||.+++..
T Consensus 158 d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 158 DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 765433 11 1 3689999999999999999964
No 227
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.33 E-value=3.2e-13 Score=122.01 Aligned_cols=102 Identities=18% Similarity=0.141 Sum_probs=75.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH-HHcCCCCCeEEE--EcCCCCCCCCCCccceEEccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALA-AARGLADKVSFQ--VGDALQQPFPDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~~~~~~fD~v~~~~ 234 (371)
++.+|||||||+|.++..+++. .+|+|+|+++ |+..+++.. .......++.++ ++|+.+++ +++||+|++..
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 4889999999999999999987 5899999999 543322110 000011168899 99998865 68899999987
Q ss_pred cccCcCCH----H---HHHHHHHHhcCCCc--EEEEEecc
Q 017428 235 SGEHMPDK----S---KFVSELARVTAPAG--TIIIVTWC 265 (371)
Q Consensus 235 ~l~~~~~~----~---~~l~~~~~~LkpgG--~l~i~~~~ 265 (371)
+ ++..++ . .+++++.++||||| .+++..+.
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 7 444332 1 37899999999999 99986654
No 228
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.32 E-value=1.9e-12 Score=118.48 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=82.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~-~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++.. .++ .++++++.+|+.+. +..+++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 6899999999999999999875 57999999999999999998754 223 36899999997653 3345789999975
Q ss_pred ccccCcC-----CHHHHHHHHHHhcCCCcEEEEEe
Q 017428 234 ESGEHMP-----DKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 234 ~~l~~~~-----~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
..-..+. ....+++++.++|+|||++++..
T Consensus 171 ~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 171 STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp C----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 3221121 12689999999999999999964
No 229
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.32 E-value=1.6e-12 Score=123.35 Aligned_cols=106 Identities=16% Similarity=0.057 Sum_probs=85.7
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCC-C-C--CCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQ-P-F--PDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~-~-~--~~~~fD~v~~~ 233 (371)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++.+++.+ +++|+++|+.+. + . ..++||+|++.
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 78999999999999999998623489999999999999999999999865 899999998763 2 1 24589999985
Q ss_pred ccc-----cCcC----CHHHHHHHHHHhcCCCcEEEEEec
Q 017428 234 ESG-----EHMP----DKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 234 ~~l-----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-.. .+.. +...++..+.++|+|||.|++...
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 322 2222 345678888999999999998763
No 230
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.32 E-value=3e-12 Score=115.84 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=83.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC-CCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. +..+++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 6899999999999999998865 479999999999999999987542 23 36899999998763 3335789999986
Q ss_pred ccccCcCC----HHHHHHHHHHhcCCCcEEEEEe
Q 017428 234 ESGEHMPD----KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 234 ~~l~~~~~----~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
......+. ...++++++++|+|||.+++..
T Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 156 STEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 44322111 2679999999999999999864
No 231
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.31 E-value=6e-11 Score=114.24 Aligned_cols=118 Identities=19% Similarity=0.349 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE
Q 017428 135 RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV 214 (371)
Q Consensus 135 ~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 214 (371)
......+++.+++.+...+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.+++. ++.|+.
T Consensus 268 ~~~~e~l~~~~~~~l~~~~-----~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~ 340 (433)
T 1uwv_A 268 AGVNQKMVARALEWLDVQP-----EDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYH 340 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCT-----TCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred HHHHHHHHHHHHHhhcCCC-----CCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEE
Confidence 3445566777777776543 789999999999999999987 789999999999999999999998885 899999
Q ss_pred cCCCCC----CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 215 GDALQQ----PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 215 ~d~~~~----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+|+.+. ++++++||+|++.--.... ..+++.+.+ ++|++.+++..
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEES
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEEC
Confidence 999872 3456789999985433222 245555543 78988888753
No 232
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.30 E-value=1.4e-12 Score=120.62 Aligned_cols=105 Identities=20% Similarity=0.211 Sum_probs=83.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~-~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|++++.. .++ .++++++.+|+.+. +..+++||+|++.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 6899999999999999999865 57999999999999999998754 122 36899999998663 2235789999986
Q ss_pred ccccC--cCCH--HHHHHHHHHhcCCCcEEEEEe
Q 017428 234 ESGEH--MPDK--SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 234 ~~l~~--~~~~--~~~l~~~~~~LkpgG~l~i~~ 263 (371)
..-.. .... ..+++++.++|+|||++++..
T Consensus 197 ~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 197 SSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 42111 1111 689999999999999999965
No 233
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.30 E-value=3.8e-12 Score=121.31 Aligned_cols=106 Identities=12% Similarity=0.068 Sum_probs=88.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCC--C--CCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL-ADKVSFQVGDALQQP--F--PDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~--~--~~~~fD~v~~~ 233 (371)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++.+++ .++++++.+|+.+.. + ..++||+|++.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 789999999999999999986335899999999999999999999988 558999999987752 1 14689999986
Q ss_pred cc---------ccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 234 ES---------GEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 234 ~~---------l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-. .....+...++.++.+.|+|||++++...
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 32 22335667899999999999999999763
No 234
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.29 E-value=1.5e-11 Score=118.42 Aligned_cols=106 Identities=17% Similarity=0.239 Sum_probs=89.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEcc-
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSM- 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~~- 233 (371)
++.+|||+|||+|..+..+++.. +..|+++|+++.+++.++++++..++ ++.++.+|+.+.+ +++++||+|++.
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 48899999999999999999986 47999999999999999999998886 4789999998875 556789999962
Q ss_pred -----ccccCcCCH----------------HHHHHHHHHhcCCCcEEEEEecc
Q 017428 234 -----ESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 234 -----~~l~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
.++.+.++. ..+++++.++|||||++++.+.+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 344444443 47899999999999999998754
No 235
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.29 E-value=5.3e-12 Score=128.25 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=87.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCC-CCCCCccceEEcccc-
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQ-PFPDGQFDLVWSMES- 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~-~~~~~~fD~v~~~~~- 235 (371)
+.+|||+|||+|.++..++.....+|+++|+|+.+++.|+++++.+++. .+++++++|+.+. +...++||+|++.--
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 7899999999999999998853346999999999999999999999986 5899999998773 334578999998542
Q ss_pred ----------ccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 236 ----------GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 236 ----------l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+....+...++..+.++|+|||+|++..
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2233456788999999999999999765
No 236
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.29 E-value=8e-12 Score=116.37 Aligned_cols=99 Identities=19% Similarity=0.126 Sum_probs=85.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++.. ++. +.+|+++|+|+.+++.|+++++.+++.+++.++.+|+.+.. ++||+|++....
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKN-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-- 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTT-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT--
T ss_pred CCEEEEccCccCHHHHh-ccC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH--
Confidence 78999999999999999 873 67999999999999999999999998778999999998865 789999985321
Q ss_pred cCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 017428 239 MPDKSKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 239 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
....++..+.++|+|||++++.++..
T Consensus 269 --~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 --FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp --TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred --hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 12378899999999999999987643
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=6.6e-12 Score=118.99 Aligned_cols=105 Identities=23% Similarity=0.200 Sum_probs=83.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~l 236 (371)
++.+|||+|||+|.++..++.. ++.|+++|+|+.+++.|+++++.+++. ..+.++|+.+.. ...+.||+|++.-..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred CCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 3789999999999999999986 778999999999999999999999875 356788887641 113449999986432
Q ss_pred cC---------cCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 237 EH---------MPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 237 ~~---------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
.. ..+...++..+.++|+|||+|++....
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 11 123468899999999999999987743
No 238
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.28 E-value=6.8e-12 Score=114.00 Aligned_cols=105 Identities=20% Similarity=0.208 Sum_probs=83.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--C-CCCeEEEEcCCCCC-CCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG--L-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~-~~~~~~fD~v~~~ 233 (371)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...+ + .++++++.+|+.+. +..+++||+|++.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 158 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEc
Confidence 6899999999999999998865 5799999999999999999875431 1 36899999998763 2225789999985
Q ss_pred ccccCcC--CH--HHHHHHHHHhcCCCcEEEEEe
Q 017428 234 ESGEHMP--DK--SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 234 ~~l~~~~--~~--~~~l~~~~~~LkpgG~l~i~~ 263 (371)
......+ .. ..+++++.++|+|||.+++..
T Consensus 159 ~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 159 SSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 4332212 11 689999999999999999874
No 239
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.27 E-value=4.4e-12 Score=120.92 Aligned_cols=108 Identities=20% Similarity=0.185 Sum_probs=88.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCccceEEcc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVWSM 233 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~v~~~ 233 (371)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++.+++.++++++.+|+.+... ..++||+|++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 37899999999999999999862248999999999999999999999886689999999876421 25789999985
Q ss_pred ccccC---------cCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 234 ESGEH---------MPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 234 ~~l~~---------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
-.... ..+...++.++.++|+|||.+++....
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 33222 134578899999999999999988743
No 240
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.27 E-value=7.7e-12 Score=109.68 Aligned_cols=101 Identities=10% Similarity=0.112 Sum_probs=88.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
+.+|||||||+|.++..++... .++|+++|+++.+++.+++++...|+ +..+.+.|....+ +.++||+|++.-+++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~-p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDR-LDEPADVTLLLKTLP 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSC-CCSCCSEEEETTCHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccC-CCCCcchHHHHHHHH
Confidence 6899999999999999998765 68999999999999999999999886 4889999987765 458899999999999
Q ss_pred CcCCH--HHHHHHHHHhcCCCcEEEEEe
Q 017428 238 HMPDK--SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 238 ~~~~~--~~~l~~~~~~LkpgG~l~i~~ 263 (371)
++++. ...+ ++...|+|+|.++-.+
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 99664 3455 9999999999988865
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.26 E-value=3e-12 Score=121.48 Aligned_cols=104 Identities=18% Similarity=0.115 Sum_probs=86.7
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCccceEEccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~v~~~~ 234 (371)
+.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|+++++.+++. +++++.+|+.+... ..++||+|++.-
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 789999999999999999998 678999999999999999999999885 59999999877421 157899999853
Q ss_pred cccC---------cCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 235 SGEH---------MPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 235 ~l~~---------~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.... ..+...++.++.++|+|||.+++...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 2211 13346789999999999999999874
No 242
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.26 E-value=2e-11 Score=106.13 Aligned_cols=101 Identities=16% Similarity=0.177 Sum_probs=85.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++.+|||||||+|.++..+. ....|+|+|+++.+++.+++++...+ .+..+.+.|....+.+ ++||+|++.-+++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~~-~~~DvvLllk~lh 179 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPPA-EAGDLALIFKLLP 179 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCCC-CBCSEEEEESCHH
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCCC-CCcchHHHHHHHH
Confidence 47899999999999999887 36899999999999999999998877 4689999999887755 6899999999999
Q ss_pred CcCCH-HHHHHHHHHhcCCCcEEEEEe
Q 017428 238 HMPDK-SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 238 ~~~~~-~~~l~~~~~~LkpgG~l~i~~ 263 (371)
++++. .....++.+.|+++|.++-..
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 98654 233348888999998877765
No 243
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.26 E-value=2.8e-11 Score=110.78 Aligned_cols=88 Identities=18% Similarity=0.317 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.++.++..+.+.+ +.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...++ ++++++.+|+.+.
T Consensus 30 i~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 30 ILDKIIYAAKIKS-----SDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred HHHHHHHhcCCCC-----cCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 4556666666554 789999999999999999987 78999999999999999999887776 5899999999887
Q ss_pred CCCCCccceEEcccccc
Q 017428 221 PFPDGQFDLVWSMESGE 237 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~ 237 (371)
++ .+||+|+++...+
T Consensus 103 ~~--~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 103 VF--PKFDVCTANIPYK 117 (299)
T ss_dssp CC--CCCSEEEEECCGG
T ss_pred Cc--ccCCEEEEcCCcc
Confidence 64 4799999865443
No 244
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.26 E-value=3.9e-12 Score=115.49 Aligned_cols=103 Identities=18% Similarity=0.267 Sum_probs=81.1
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CC--------CCCeEEEEcCCCCC-CCCCCcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GL--------ADKVSFQVGDALQQ-PFPDGQF 227 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~--------~~~v~~~~~d~~~~-~~~~~~f 227 (371)
+.+|||||||+|.++..+++.-..+|+++|+++.+++.|++++ .. ++ .++++++.+|+.+. +. +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 6899999999999999998862359999999999999999987 33 22 46899999997653 22 5789
Q ss_pred ceEEccccccCcC--C--HHHHHHHHHHhcCCCcEEEEEe
Q 017428 228 DLVWSMESGEHMP--D--KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 228 D~v~~~~~l~~~~--~--~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|+|++....+.-+ . ...++++++++|+|||++++..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999865432111 1 2678999999999999999864
No 245
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.23 E-value=2.8e-11 Score=109.61 Aligned_cols=113 Identities=19% Similarity=0.157 Sum_probs=83.2
Q ss_pred CCCEEEEECCCc------ChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEE-EEcCCCCCCCCCCccc
Q 017428 158 RPKNVVDVGCGI------GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSF-QVGDALQQPFPDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~Gt------G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~fD 228 (371)
++.+|||+|||+ |. ..+++.. +.+|+|+|+|+. + +++++ +++|+.+++++ ++||
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~-~~fD 125 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTA-NKWD 125 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCS-SCEE
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCcc-Cccc
Confidence 488999999944 66 4455555 379999999997 1 36889 99999887654 7899
Q ss_pred eEEccccccC-----------cCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCC
Q 017428 229 LVWSMESGEH-----------MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (371)
Q Consensus 229 ~v~~~~~l~~-----------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (371)
+|+++...+. ......+++++.++|||||++++..+...
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~------------------------------ 175 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS------------------------------ 175 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS------------------------------
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC------------------------------
Confidence 9998643221 11245899999999999999999764211
Q ss_pred CHHHHHHHHHhCCCceEEEE
Q 017428 298 STADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 298 ~~~~~~~ll~~aGF~~v~~~ 317 (371)
..+++.+++++.||..+.+.
T Consensus 176 ~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp CCHHHHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCcEEEEE
Confidence 22467788888888876654
No 246
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.22 E-value=7.5e-12 Score=112.27 Aligned_cols=96 Identities=13% Similarity=0.004 Sum_probs=80.2
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCCCCCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 235 (371)
+.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++... ++ .++++++.+|+.+.. ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d-- 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL-- 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES--
T ss_pred CCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC--
Confidence 689999999999999999887 689999999999999998765321 11 258999999987754 789999986
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
..++..+++++.++|+|||.+++..
T Consensus 147 ---~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 ---QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ---SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 2455669999999999999999864
No 247
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.21 E-value=6.2e-12 Score=111.77 Aligned_cols=83 Identities=17% Similarity=0.276 Sum_probs=66.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.++.++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++... ++++++.+|+.+.
T Consensus 18 ~~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~ 88 (244)
T 1qam_A 18 NIDKIMTNIRLNE-----HDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHTTCCCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGC
T ss_pred HHHHHHHhCCCCC-----CCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhC
Confidence 5566666666543 789999999999999999998 589999999999999999887532 5899999999998
Q ss_pred CCCC-CccceEEcc
Q 017428 221 PFPD-GQFDLVWSM 233 (371)
Q Consensus 221 ~~~~-~~fD~v~~~ 233 (371)
++++ ..| .|+++
T Consensus 89 ~~~~~~~~-~vv~n 101 (244)
T 1qam_A 89 KFPKNQSY-KIFGN 101 (244)
T ss_dssp CCCSSCCC-EEEEE
T ss_pred CcccCCCe-EEEEe
Confidence 7764 345 34443
No 248
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.20 E-value=8.2e-10 Score=103.33 Aligned_cols=187 Identities=18% Similarity=0.250 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHH--------c--------CCEEEEEeCCHHHHHHHHHH
Q 017428 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKK--------F--------GAKCQGITLSPVQAQRANAL 200 (371)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~--------~--------~~~v~gvD~s~~~~~~a~~~ 200 (371)
....++++.+..+...........+|+|+|||+|..+..+... + ..+|...|+........=+.
T Consensus 31 ~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~ 110 (374)
T 3b5i_A 31 SMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQL 110 (374)
T ss_dssp HHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhh
Confidence 3455666667766554311224689999999999998877332 1 24677777766554332222
Q ss_pred HHHc-----------CCCCCeEEEE---cCCCCCCCCCCccceEEccccccCcC--------------------------
Q 017428 201 AAAR-----------GLADKVSFQV---GDALQQPFPDGQFDLVWSMESGEHMP-------------------------- 240 (371)
Q Consensus 201 ~~~~-----------~~~~~v~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~-------------------------- 240 (371)
+... +...+-.|.. +.+..-.+|+++||+|+++.+||++.
T Consensus 111 L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~ 190 (374)
T 3b5i_A 111 LPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGE 190 (374)
T ss_dssp SCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCH
T ss_pred hhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCH
Confidence 1110 0000111222 22223357899999999999999986
Q ss_pred ------------CHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccc----cC-hHHHHHHHHH----------hhccCC
Q 017428 241 ------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEES----LQ-PWEQELLKKI----------CDAYYL 293 (371)
Q Consensus 241 ------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~----~~-~~~~~~~~~~----------~~~~~~ 293 (371)
|...+|+..++.|+|||++++...+.....+.... +. ......+... ...+..
T Consensus 191 ~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~ 270 (374)
T 3b5i_A 191 KTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNI 270 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCc
Confidence 44457888999999999999988765543211100 00 1111112211 111233
Q ss_pred C-CCCCHHHHHHHHH-hCCCceEEEEecCCcc
Q 017428 294 P-AWCSTADYVKLLQ-SLSLEDIKAEDWSQNV 323 (371)
Q Consensus 294 ~-~~~~~~~~~~ll~-~aGF~~v~~~~~~~~~ 323 (371)
| .+.+.++++.+++ +.||++..++.+..+.
T Consensus 271 P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~ 302 (374)
T 3b5i_A 271 PVYAPSLQDFKEVVDANGSFAIDKLVVYKGGS 302 (374)
T ss_dssp CBCCCCHHHHHHHHHHHCSEEEEEEEEEECCC
T ss_pred cccCCCHHHHHHHHHhcCCcEEEEEEEEeecC
Confidence 3 2468999999998 5999998887765443
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=6.1e-12 Score=115.33 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=72.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCCCCCCCccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITL----SPVQAQRANALAAARGLADKVSFQVG-DALQQPFPDGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~----s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD~v~~ 232 (371)
++.+|||||||+|.++..+++. .+|+|+|+ ++.+++.+. .+..+ .+++.++++ |+..++ .++||+|++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~--~~~fD~V~s 154 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP--PERCDTLLC 154 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--cCCCCEEEE
Confidence 4789999999999999999987 58999999 554432111 01111 146999998 887764 578999999
Q ss_pred ccccc---CcCCHH---HHHHHHHHhcCCCcEEEEEec
Q 017428 233 MESGE---HMPDKS---KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 233 ~~~l~---~~~~~~---~~l~~~~~~LkpgG~l~i~~~ 264 (371)
..++. +..+.. .++..+.++|||||.+++..+
T Consensus 155 d~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 155 DIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 76653 112222 578899999999999988654
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.18 E-value=1.3e-10 Score=105.56 Aligned_cols=87 Identities=22% Similarity=0.258 Sum_probs=75.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
+++.++..+.+.+ +.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++... ++++++.+|+.+.
T Consensus 38 i~~~Iv~~l~~~~-----~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~ 108 (295)
T 3gru_A 38 FVNKAVESANLTK-----DDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKV 108 (295)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTS
T ss_pred HHHHHHHhcCCCC-----cCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhC
Confidence 5677777777664 889999999999999999998 789999999999999999998732 5899999999998
Q ss_pred CCCCCccceEEccccc
Q 017428 221 PFPDGQFDLVWSMESG 236 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l 236 (371)
++++.+||+|+++...
T Consensus 109 ~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 109 DLNKLDFNKVVANLPY 124 (295)
T ss_dssp CGGGSCCSEEEEECCG
T ss_pred CcccCCccEEEEeCcc
Confidence 8877789999977443
No 251
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.17 E-value=4.5e-10 Score=107.56 Aligned_cols=97 Identities=19% Similarity=0.295 Sum_probs=79.1
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 238 (371)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.+++. ++|+.+|+.+.. + .+||+|++.-....
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~-~-~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS-V-KGFDTVIVDPPRAG 365 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC-C-TTCSEEEECCCTTC
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC-c-cCCCEEEEcCCccc
Confidence 789999999999999999986 679999999999999999999988874 999999998864 2 38999998643222
Q ss_pred cCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 239 MPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 239 ~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
. ...+++.+. .|+|||.+++..
T Consensus 366 ~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 L--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp S--CHHHHHHHH-HHCCSEEEEEES
T ss_pred h--HHHHHHHHH-hcCCCcEEEEEC
Confidence 1 134555554 599999998863
No 252
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.15 E-value=3.5e-10 Score=107.17 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=93.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-C-------------------------------------
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G------------------------------------- 181 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~------------------------------------- 181 (371)
.+...++......+ +..|||++||+|.+++.++... +
T Consensus 188 ~lAa~ll~l~~~~~-----~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 262 (393)
T 3k0b_A 188 TMAAALVLLTSWHP-----DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQ 262 (393)
T ss_dssp HHHHHHHHHSCCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhCCCC-----CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccC
Confidence 35566677766654 7899999999999999888754 2
Q ss_pred -CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC-c---CCHHHHHHHHHHhcCC-
Q 017428 182 -AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH-M---PDKSKFVSELARVTAP- 255 (371)
Q Consensus 182 -~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~---~~~~~~l~~~~~~Lkp- 255 (371)
.+|+|+|+++.+++.|++++...|+.+++++.++|+.+.+.+ ++||+|+++--+.. + .+...+++.+.+.||+
T Consensus 263 ~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 263 PLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 459999999999999999999999987899999999998754 58999999844321 2 2334566666667765
Q ss_pred -CcEEEEEec
Q 017428 256 -AGTIIIVTW 264 (371)
Q Consensus 256 -gG~l~i~~~ 264 (371)
||.+++...
T Consensus 342 ~g~~~~iit~ 351 (393)
T 3k0b_A 342 PTWSVYVLTS 351 (393)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 898888763
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.15 E-value=4.3e-10 Score=106.12 Aligned_cols=119 Identities=18% Similarity=0.096 Sum_probs=94.5
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-C-------------------------------------
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G------------------------------------- 181 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~------------------------------------- 181 (371)
.+...++......+ +..|||.+||+|.+++..+... +
T Consensus 181 ~LAaall~l~~~~~-----~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 255 (384)
T 3ldg_A 181 NMAAAIILLSNWFP-----DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDI 255 (384)
T ss_dssp HHHHHHHHHTTCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhCCCC-----CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccC
Confidence 35556666666654 7899999999999999888653 2
Q ss_pred -CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc-Cc---CCHHHHHHHHHHhcCC-
Q 017428 182 -AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE-HM---PDKSKFVSELARVTAP- 255 (371)
Q Consensus 182 -~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~-~~---~~~~~~l~~~~~~Lkp- 255 (371)
.+|+|+|+++.+++.|++++...|+.+++++.++|+.+.+.+ ++||+|+++--+. -+ .+...+++++.+.||+
T Consensus 256 ~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~ 334 (384)
T 3ldg_A 256 QLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPL 334 (384)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhC
Confidence 359999999999999999999999988899999999998754 5899999974432 12 2346677777778876
Q ss_pred -CcEEEEEec
Q 017428 256 -AGTIIIVTW 264 (371)
Q Consensus 256 -gG~l~i~~~ 264 (371)
||.+++...
T Consensus 335 ~g~~~~iit~ 344 (384)
T 3ldg_A 335 KTWSQFILTN 344 (384)
T ss_dssp TTSEEEEEES
T ss_pred CCcEEEEEEC
Confidence 999888763
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.14 E-value=2.3e-13 Score=121.17 Aligned_cols=113 Identities=17% Similarity=0.228 Sum_probs=84.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.++.+++.+.+.+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++. ..++++++++|+.+.
T Consensus 17 ~~~~i~~~~~~~~-----~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 17 VLNQIIKQLNLKE-----TDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQF 87 (245)
T ss_dssp THHHHHHHCCCCS-----SEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTT
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhc
Confidence 4566677776654 789999999999999999998 6899999999999998887654 125799999999998
Q ss_pred CCCC-CccceEEcccccc-----------CcCCHHHHH----HHHHHhcCCCcEEEEEe
Q 017428 221 PFPD-GQFDLVWSMESGE-----------HMPDKSKFV----SELARVTAPAGTIIIVT 263 (371)
Q Consensus 221 ~~~~-~~fD~v~~~~~l~-----------~~~~~~~~l----~~~~~~LkpgG~l~i~~ 263 (371)
+++. ++| .|+++...+ |..+...++ +.+.++|+|||.+.+..
T Consensus 88 ~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 88 QFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 7763 678 566543221 122222334 66899999999887754
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.13 E-value=3.5e-10 Score=106.99 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=93.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-C--------------------------------------
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G-------------------------------------- 181 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~-------------------------------------- 181 (371)
+...++......+ +.+|||++||+|.+++.++... +
T Consensus 183 lAa~ll~~~~~~~-----~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 183 LAAGLIYLTPWKA-----GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHTSCCCT-----TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHhhCCCC-----CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 5555666666554 7899999999999999988763 1
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccccC-c---CCHHHHHHHHHHhcCC--
Q 017428 182 AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH-M---PDKSKFVSELARVTAP-- 255 (371)
Q Consensus 182 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~---~~~~~~l~~~~~~Lkp-- 255 (371)
.+|+|+|+++.+++.|++++...++.++++|.+.|+.+.+.+ ++||+|+++--+.. + .+...+++++.+.||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 479999999999999999999999877899999999988654 68999999765432 2 2345677777777776
Q ss_pred CcEEEEEec
Q 017428 256 AGTIIIVTW 264 (371)
Q Consensus 256 gG~l~i~~~ 264 (371)
||.+++...
T Consensus 337 g~~~~iit~ 345 (385)
T 3ldu_A 337 NWSYYLITS 345 (385)
T ss_dssp SCEEEEEES
T ss_pred CCEEEEEEC
Confidence 888888763
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.09 E-value=4.2e-10 Score=108.80 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=86.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--------------GAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPF 222 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~ 222 (371)
++.+|||+|||+|.++..+++.. ...++|+|+++.+++.|+.++...++.. ++.+.++|....+.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 37899999999999999888753 3579999999999999999988888743 67889999887654
Q ss_pred CCCccceEEccccccCcCC-----------------HHHHHHHHHHhcCCCcEEEEEec
Q 017428 223 PDGQFDLVWSMESGEHMPD-----------------KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 223 ~~~~fD~v~~~~~l~~~~~-----------------~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
. ++||+|+++-.+.+... ...+++++.+.|||||++.++..
T Consensus 251 ~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 251 S-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp S-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 3 58999999866554321 13789999999999999998873
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.08 E-value=3.2e-10 Score=106.89 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC
Q 017428 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (371)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 216 (371)
....++..+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.+++ ++++|+.+|
T Consensus 198 ~~~~l~~~~~~~~~~~------~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d 269 (369)
T 3bt7_A 198 MNIQMLEWALDVTKGS------KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMA 269 (369)
T ss_dssp HHHHHHHHHHHHTTTC------CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCC
T ss_pred HHHHHHHHHHHHhhcC------CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECC
Confidence 3455666667666532 568999999999999999885 57999999999999999999999988 589999999
Q ss_pred CCCCC--CCC--------------CccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 217 ALQQP--FPD--------------GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 217 ~~~~~--~~~--------------~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+.+.. +.. .+||+|++.--- ..+..++.+.|+++|.++++..
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 270 AEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp SHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEES
T ss_pred HHHHHHHHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEEC
Confidence 87641 121 379999864221 1234567777889999888764
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=6.4e-10 Score=99.11 Aligned_cols=83 Identities=16% Similarity=0.209 Sum_probs=68.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.++.+++.+.+.+ +.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.+.
T Consensus 17 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 17 VLQKIVSAIHPQK-----TDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhC
Confidence 5666777777664 889999999999999999987 68999999999999999998864 25899999999998
Q ss_pred CCC----CCccceEEcc
Q 017428 221 PFP----DGQFDLVWSM 233 (371)
Q Consensus 221 ~~~----~~~fD~v~~~ 233 (371)
+++ +++|| |+++
T Consensus 88 ~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CGGGSCCSSCEE-EEEE
T ss_pred CHHHhccCCCeE-EEec
Confidence 754 25688 5554
No 259
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.03 E-value=3.2e-09 Score=97.32 Aligned_cols=106 Identities=13% Similarity=0.103 Sum_probs=81.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC---CccceEEc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD---GQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fD~v~~ 232 (371)
++.+|||+|||+|..+..+++.. ...|+++|+++.+++.++++++..|+ .++.++.+|+.+.+... ++||+|++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCccccccCCCCEEEE
Confidence 48899999999999999999876 37999999999999999999999988 57999999988764321 57999996
Q ss_pred c------ccccCcC-----------CH-------HHHHHHHHHhcCCCcEEEEEecc
Q 017428 233 M------ESGEHMP-----------DK-------SKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 233 ~------~~l~~~~-----------~~-------~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
. .++..-+ +. ..++..+.++|+ ||+|+..+.+
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 2 1221111 11 246778888887 9988877643
No 260
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.03 E-value=6.5e-10 Score=106.63 Aligned_cols=108 Identities=18% Similarity=0.267 Sum_probs=82.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
+.+.+++.+... ++.+|||+|||+|.++..+++++ +.+++|+|+++.+++.| .++.++++|+.
T Consensus 27 l~~~~~~~~~~~-----~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~ 91 (421)
T 2ih2_A 27 VVDFMVSLAEAP-----RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFL 91 (421)
T ss_dssp HHHHHHHHCCCC-----TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGG
T ss_pred HHHHHHHhhccC-----CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChh
Confidence 444555555432 36799999999999999999875 47999999999998765 47899999998
Q ss_pred CCCCCCCccceEEccccccC----------cCC-------------------HHHHHHHHHHhcCCCcEEEEEec
Q 017428 219 QQPFPDGQFDLVWSMESGEH----------MPD-------------------KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~----------~~~-------------------~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+.. +.++||+|+++--... +.+ ...+++.+.++|+|||.++++..
T Consensus 92 ~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 92 LWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp GCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 764 3578999999632211 111 12568999999999999999874
No 261
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.98 E-value=6e-10 Score=105.08 Aligned_cols=101 Identities=13% Similarity=0.005 Sum_probs=84.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCC-eEEEEcCCCCCC--CCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADK-VSFQVGDALQQP--FPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~-v~~~~~d~~~~~--~~~~~fD~v~~~ 233 (371)
+.+|||++||+|.+++.++.+. + .+|+++|+++..++.++++++.+++.++ ++++.+|+.+.. ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 7899999999999999999875 4 5899999999999999999999998665 999999986531 124679999976
Q ss_pred ccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 234 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
- ......++..+.+.|+|||+|++..
T Consensus 133 P----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 1233568999999999999888765
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.98 E-value=1.1e-09 Score=98.43 Aligned_cols=85 Identities=21% Similarity=0.174 Sum_probs=70.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.++.+++.+.+.+ + +|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .+++++++|+.+.
T Consensus 35 i~~~Iv~~~~~~~-----~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~ 103 (271)
T 3fut_A 35 HLRRIVEAARPFT-----G-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHHHCCCC-----S-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGS
T ss_pred HHHHHHHhcCCCC-----C-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhC
Confidence 5677777777665 7 9999999999999999997 68999999999999999988742 5899999999988
Q ss_pred CCCCC-ccceEEccccc
Q 017428 221 PFPDG-QFDLVWSMESG 236 (371)
Q Consensus 221 ~~~~~-~fD~v~~~~~l 236 (371)
++++. .+|.|+++.-.
T Consensus 104 ~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 104 PWEEVPQGSLLVANLPY 120 (271)
T ss_dssp CGGGSCTTEEEEEEECS
T ss_pred ChhhccCccEEEecCcc
Confidence 76542 68888776543
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.96 E-value=2e-09 Score=101.43 Aligned_cols=100 Identities=14% Similarity=0.039 Sum_probs=82.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc---------------CCCCCeEEEEcCCCCCC-
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR---------------GLADKVSFQVGDALQQP- 221 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---------------~~~~~v~~~~~d~~~~~- 221 (371)
+.+|||+|||+|..++.++... +.+|+++|+++.+++.++++++.+ ++. +++++.+|+.+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHHH
Confidence 7899999999999999999986 468999999999999999999988 764 4999999987642
Q ss_pred CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 222 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
...+.||+|++. .. .....++..+.+.|||||.|++..
T Consensus 127 ~~~~~fD~I~lD-P~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLD-PF---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEEC-CS---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeC-CC---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 113579999954 22 233678999999999999888764
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.94 E-value=7.9e-10 Score=102.25 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=79.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC---CC----CCeEEEEcCCCCCCC----CCCc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG---LA----DKVSFQVGDALQQPF----PDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~----~~v~~~~~d~~~~~~----~~~~ 226 (371)
++.+||+||||+|..+..+++....+|++||+++.+++.|++.+...+ +. ++++++.+|+....- ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 478999999999999999988645789999999999999999864321 11 279999999877421 3578
Q ss_pred cceEEccccc---cCcC---CHHHHHHHH----HHhcCCCcEEEEEe
Q 017428 227 FDLVWSMESG---EHMP---DKSKFVSEL----ARVTAPAGTIIIVT 263 (371)
Q Consensus 227 fD~v~~~~~l---~~~~---~~~~~l~~~----~~~LkpgG~l~i~~ 263 (371)
||+|++...- ...+ --..+++.+ .++|+|||++++..
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 9999986432 1111 124566666 89999999999875
No 265
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.93 E-value=1.2e-09 Score=99.56 Aligned_cols=88 Identities=20% Similarity=0.240 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
+++.++..+.+.+ +.+|||+|||+|..+..+++.+ +.+|+|+|+|+.+++.|+++++..+ .++.++++|+.+
T Consensus 14 Ll~e~l~~L~~~~-----g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~ 86 (301)
T 1m6y_A 14 MVREVIEFLKPED-----EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYRE 86 (301)
T ss_dssp THHHHHHHHCCCT-----TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGG
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHH
Confidence 4455666666554 8899999999999999999987 6899999999999999999988776 589999999987
Q ss_pred CC--CC---CCccceEEcccc
Q 017428 220 QP--FP---DGQFDLVWSMES 235 (371)
Q Consensus 220 ~~--~~---~~~fD~v~~~~~ 235 (371)
++ +. .++||.|++...
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHhcCCCCCCEEEEcCc
Confidence 64 11 157999987543
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.92 E-value=4.1e-08 Score=83.70 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=78.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCeEEEEcCCCCC---------------C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL--ADKVSFQVGDALQQ---------------P 221 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---------------~ 221 (371)
..+|||+|| |..++.+++..+.+|+.+|.+++..+.|+++++..|+ ..+++++.+|+.+. +
T Consensus 31 a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 689999998 5788888873368999999999999999999999998 78999999997542 1
Q ss_pred --------C-CCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 222 --------F-PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 222 --------~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
. ..++||+|++-.- .....+..+.+.|+|||.|++-+
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 1378999998752 23466777889999999996633
No 267
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.88 E-value=2.5e-08 Score=93.38 Aligned_cols=160 Identities=16% Similarity=0.174 Sum_probs=101.6
Q ss_pred CCEEEEECCCcChHHHHHHHH-------------c-----CCEEEEEeCC-----------HHHHHHHHHHHHHcCCCCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKK-------------F-----GAKCQGITLS-----------PVQAQRANALAAARGLADK 209 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~-------------~-----~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~ 209 (371)
..+|+|+||++|..+..+... . ..+|+..|+. +.+.+.+++ ..|-..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 589999999999998877765 1 2468888987 444433222 2221123
Q ss_pred eEEEEcCCCC---CCCCCCccceEEccccccCcCCHH---------------------------------------HHHH
Q 017428 210 VSFQVGDALQ---QPFPDGQFDLVWSMESGEHMPDKS---------------------------------------KFVS 247 (371)
Q Consensus 210 v~~~~~d~~~---~~~~~~~fD~v~~~~~l~~~~~~~---------------------------------------~~l~ 247 (371)
..|+.+.... ..||++++|+|+++.+||++.+.+ .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566666554 358899999999999999985432 1255
Q ss_pred HHHHhcCCCcEEEEEeccCCCC--CcCcc-ccChHHHHHHHH------HhhccCCC-CCCCHHHHHHHHHhC-CCceEEE
Q 017428 248 ELARVTAPAGTIIIVTWCHRDL--APSEE-SLQPWEQELLKK------ICDAYYLP-AWCSTADYVKLLQSL-SLEDIKA 316 (371)
Q Consensus 248 ~~~~~LkpgG~l~i~~~~~~~~--~~~~~-~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~ll~~a-GF~~v~~ 316 (371)
..++.|+|||++++...+.... .+... .+......+..+ -.+.+..| .+.+.++++.++++. ||++..+
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 5589999999999998776543 21100 111111111111 11223333 246899999999998 5888887
Q ss_pred EecCC
Q 017428 317 EDWSQ 321 (371)
Q Consensus 317 ~~~~~ 321 (371)
+.+..
T Consensus 290 e~~~~ 294 (384)
T 2efj_A 290 ETFNA 294 (384)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 76544
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.87 E-value=2e-08 Score=99.67 Aligned_cols=100 Identities=16% Similarity=0.101 Sum_probs=77.4
Q ss_pred CCEEEEECCCcChHH---HHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSS---RYLAKKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~---~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 233 (371)
...|||||||+|.+. ...+++.+. +|++||-++ +...|++..+.+++.++|+++.+|+++...| +++|+|++=
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 467999999999984 444444333 689999997 6778899999999999999999999998765 789999973
Q ss_pred ccccCc--CCHHHHHHHHHHhcCCCcEEE
Q 017428 234 ESGEHM--PDKSKFVSELARVTAPAGTII 260 (371)
Q Consensus 234 ~~l~~~--~~~~~~l~~~~~~LkpgG~l~ 260 (371)
.+=..+ +....++....|.|||||.++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 221111 234467888899999999864
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.86 E-value=3.6e-10 Score=100.97 Aligned_cols=79 Identities=24% Similarity=0.319 Sum_probs=65.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCH-------HHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CCC--Ccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSP-------VQAQRANALAAARGLADKVSFQVGDALQQ-P-FPD--GQF 227 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~-------~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~--~~f 227 (371)
+.+|||+|||+|..+..++.. +++|+|+|+++ .+++.|+++++.+++.++++++.+|+.+. + +++ ++|
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred cCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 689999999999999999986 78999999999 99999998877776655699999998774 2 344 789
Q ss_pred ceEEccccccC
Q 017428 228 DLVWSMESGEH 238 (371)
Q Consensus 228 D~v~~~~~l~~ 238 (371)
|+|++.-.+.+
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999766554
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.84 E-value=1.8e-08 Score=102.36 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=89.2
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc---------------------------------------
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--------------------------------------- 180 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--------------------------------------- 180 (371)
.+...++......+ +..|||.+||+|.+++.++...
T Consensus 177 ~LAa~ll~~~~~~~-----~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~ 251 (703)
T 3v97_A 177 TLAAAIVMRSGWQP-----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 251 (703)
T ss_dssp HHHHHHHHHTTCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCC-----CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhc
Confidence 35556666666544 7889999999999999887642
Q ss_pred ----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCccceEEccccccC-c---CCHHHHHH---
Q 017428 181 ----GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMESGEH-M---PDKSKFVS--- 247 (371)
Q Consensus 181 ----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~~~~~l~~-~---~~~~~~l~--- 247 (371)
...|+|+|+++.+++.|+.++...|+.+.+.|.++|+.++. ...++||+|+++--... + .+...+++
T Consensus 252 ~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~ 331 (703)
T 3v97_A 252 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLG 331 (703)
T ss_dssp HHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHH
T ss_pred cccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHH
Confidence 25799999999999999999999999877999999998873 33348999999843321 1 12334444
Q ss_pred HHHHhcCCCcEEEEEe
Q 017428 248 ELARVTAPAGTIIIVT 263 (371)
Q Consensus 248 ~~~~~LkpgG~l~i~~ 263 (371)
++.+.+.|||.+++..
T Consensus 332 ~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 332 RIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHHCTTCEEEEEE
T ss_pred HHHHhhCCCCeEEEEe
Confidence 4445556899999976
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.83 E-value=8.7e-09 Score=92.95 Aligned_cols=72 Identities=18% Similarity=0.297 Sum_probs=61.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCE----EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAK----CQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~----v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 216 (371)
.++.+++.+.+.+ +.+|||||||+|.++..+++.. .. |+|+|+++.+++.++++. .++++++++|
T Consensus 30 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~~La~~~-~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D 98 (279)
T 3uzu_A 30 VIDAIVAAIRPER-----GERMVEIGPGLGALTGPVIARL-ATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGD 98 (279)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTSTTHHHHHHHH-CBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEccccHHHHHHHHHhC-CCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECC
Confidence 5566777776654 8899999999999999999874 45 999999999999999883 2579999999
Q ss_pred CCCCCCC
Q 017428 217 ALQQPFP 223 (371)
Q Consensus 217 ~~~~~~~ 223 (371)
+.+.+++
T Consensus 99 ~~~~~~~ 105 (279)
T 3uzu_A 99 ALTFDFG 105 (279)
T ss_dssp GGGCCGG
T ss_pred hhcCChh
Confidence 9998764
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.80 E-value=1.3e-08 Score=100.31 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=84.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-------------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-------------------GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQV 214 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~v~~~~ 214 (371)
++.+|||.|||+|.++..+++.+ ...++|+|+++.+++.|+.++...++.. ++.+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 37899999999999998887754 1379999999999999999988777743 277899
Q ss_pred cCCCCCC-CCCCccceEEccccccCcCC--------------HHHHHHHHHHhcCCCcEEEEEec
Q 017428 215 GDALQQP-FPDGQFDLVWSMESGEHMPD--------------KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 215 ~d~~~~~-~~~~~fD~v~~~~~l~~~~~--------------~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|....+ ...++||+|+++--+..... ...+++++.+.|+|||++.++..
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 9986643 34578999999755443221 24789999999999999998763
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.80 E-value=2.9e-08 Score=88.13 Aligned_cols=89 Identities=18% Similarity=0.173 Sum_probs=67.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
.++.+++.+...+ +.+|||||||+|.++..+++....+|+|+|+++.+++.++++ . ..+++++++|+.+.
T Consensus 19 i~~~iv~~~~~~~-----~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~--~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 19 VLKKIAEELNIEE-----GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---G--DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---C--CTTEEEECSCTTTC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---c--CCCeEEEEcchhhC
Confidence 5667777776654 889999999999999999987337999999999999999876 1 25899999999998
Q ss_pred CCCCCccceEEccccccCc
Q 017428 221 PFPDGQFDLVWSMESGEHM 239 (371)
Q Consensus 221 ~~~~~~fD~v~~~~~l~~~ 239 (371)
++++..-+.++..+.-+++
T Consensus 89 ~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 89 PFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp CGGGSCSSEEEEEECCTTT
T ss_pred ChhHccCCcEEEEECchhc
Confidence 7654211333444444444
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.77 E-value=3.1e-09 Score=100.47 Aligned_cols=73 Identities=21% Similarity=0.119 Sum_probs=64.1
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CCCCCeEEEEcCCCCC-C-CCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GLADKVSFQVGDALQQ-P-FPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~-~-~~~~~fD~v~~~ 233 (371)
+.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+++++.. |+ .+++++++|+.+. + .++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 789999999999999999886 789999999999999999999987 77 6899999999874 2 124689999984
No 275
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.73 E-value=2.5e-08 Score=92.66 Aligned_cols=162 Identities=14% Similarity=0.101 Sum_probs=104.1
Q ss_pred CCCEEEEECCCcChHHHHHHHH----------------c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC--
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKK----------------F-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL-- 218 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~----------------~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-- 218 (371)
...+|+|+||++|..+..+... . ..+|+..|+........-+.+....-..+..|+.+...
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3578999999999876654432 1 25789999998888776655432100002345554433
Q ss_pred -CCCCCCCccceEEccccccCcCCH---------------------------------HHHHHHHHHhcCCCcEEEEEec
Q 017428 219 -QQPFPDGQFDLVWSMESGEHMPDK---------------------------------SKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 219 -~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
...+|++++|+|+++.+||++.+. ..+|+..++.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 346889999999999999998542 2458888999999999999887
Q ss_pred cCCCCCcCcc---ccChHHHHHHHHHhh----------ccCCC-CCCCHHHHHHHHHhCCC-ceEEEEec
Q 017428 265 CHRDLAPSEE---SLQPWEQELLKKICD----------AYYLP-AWCSTADYVKLLQSLSL-EDIKAEDW 319 (371)
Q Consensus 265 ~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~ll~~aGF-~~v~~~~~ 319 (371)
+.....+... .+.......+..... .+..| .+.+.++++.++++.|. .+...+.+
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 6654322111 122223333322111 12333 24689999999999964 77766554
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.72 E-value=1.2e-08 Score=90.88 Aligned_cols=127 Identities=21% Similarity=0.211 Sum_probs=85.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-------C------CEEEEEeCCH---HHHH-----------HHHHHHHHcC-----
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-------G------AKCQGITLSP---VQAQ-----------RANALAAARG----- 205 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-------~------~~v~gvD~s~---~~~~-----------~a~~~~~~~~----- 205 (371)
+..+|||+|+|+|..+..+++.. . .+|+++|..| +.+. .|++.++.+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 36799999999999988876542 1 4899999876 4433 5666655421
Q ss_pred -----CC---CCeEEEEcCCCC-CC-CCC---CccceEEccc-cccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCC
Q 017428 206 -----LA---DKVSFQVGDALQ-QP-FPD---GQFDLVWSME-SGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDL 269 (371)
Q Consensus 206 -----~~---~~v~~~~~d~~~-~~-~~~---~~fD~v~~~~-~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 269 (371)
+. .+++++.+|+.+ ++ .++ ..||+|+.-. .-...++ ...+++.+.++|+|||.|+...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys------ 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC------
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe------
Confidence 11 357789999876 33 222 2799999843 2221223 2679999999999999988522
Q ss_pred CcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEe
Q 017428 270 APSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (371)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 318 (371)
....+++.|.++||.+.....
T Consensus 214 ----------------------------aa~~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 214 ----------------------------SAGFVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp ----------------------------CBHHHHHHHHHHTEEEEEECC
T ss_pred ----------------------------CCHHHHHHHHHCCCEEEeCCC
Confidence 112467888999999776543
No 277
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.72 E-value=8.2e-09 Score=91.85 Aligned_cols=96 Identities=23% Similarity=0.238 Sum_probs=68.5
Q ss_pred CEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-------C-CCCCeEEEEcCCCCC-CCCCCccceE
Q 017428 160 KNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-------G-LADKVSFQVGDALQQ-PFPDGQFDLV 230 (371)
Q Consensus 160 ~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~-~~~~v~~~~~d~~~~-~~~~~~fD~v 230 (371)
.+|||+|||+|..+..++.. +++|+++|.++.+.+.+++.++.. + +..+++++.+|..+. +...++||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 89999999999999999998 779999999999877776665432 1 224699999998763 3222479999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCc
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAG 257 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG 257 (371)
++.-.+.+- .....+++..++|++.+
T Consensus 169 ~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 169 YLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EECCCCCCC-CC-----HHHHHHHHHS
T ss_pred EEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 998777553 22345666666776654
No 278
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.67 E-value=9.8e-08 Score=85.94 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=82.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--C--CCCCeEEEEcCCCCC-CCCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--G--LADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~--~~~~v~~~~~d~~~~-~~~~~~fD~v~~ 232 (371)
+.+||=||.|.|..+..+++.. ..+|+.||+++..++.+++.+... + -.++++++.+|.... .-..++||+|+.
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~ 163 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEE
Confidence 7899999999999999999865 468999999999999999987532 1 136899999998875 334678999986
Q ss_pred cccccCc-C---CHHHHHHHHHHhcCCCcEEEEEe
Q 017428 233 MESGEHM-P---DKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 233 ~~~l~~~-~---~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
-..=..- . --..+++.+++.|+|||+++...
T Consensus 164 D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp SCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred eCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 4321110 1 11578999999999999999865
No 279
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.67 E-value=6.7e-08 Score=85.35 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=75.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
.+.++.++..++ ++.+|||||||+|.|+..+++..+ ..|+|+|++..+...... ......++.....++..
T Consensus 62 KL~ei~ek~~l~-----~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~---~~~~g~~ii~~~~~~dv 133 (277)
T 3evf_A 62 KLRWFHERGYVK-----LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN---VQSLGWNIITFKDKTDI 133 (277)
T ss_dssp HHHHHHHTTSSC-----CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC---CCBTTGGGEEEECSCCT
T ss_pred HHHHHHHhCCCC-----CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc---cCcCCCCeEEEecccee
Confidence 445555554344 478999999999999999887643 367888887433100000 00000145556776655
Q ss_pred CCCCCCccceEEccccccCcCC----H---HHHHHHHHHhcCCC-cEEEEEec
Q 017428 220 QPFPDGQFDLVWSMESGEHMPD----K---SKFVSELARVTAPA-GTIIIVTW 264 (371)
Q Consensus 220 ~~~~~~~fD~v~~~~~l~~~~~----~---~~~l~~~~~~Lkpg-G~l~i~~~ 264 (371)
..+++++||+|++..+.. ... . ..+++.+.++|+|| |.+++-.+
T Consensus 134 ~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 134 HRLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp TTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred hhcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 566778999999977655 322 1 13568889999999 99999654
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.65 E-value=1.7e-08 Score=89.69 Aligned_cols=83 Identities=17% Similarity=0.125 Sum_probs=63.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAK--CQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~--v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
+++.+++.+.+.+ +.+|||||||+|.++. +. . +.+ |+++|+++.+++.+++++... ++++++++|+.
T Consensus 9 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~ 77 (252)
T 1qyr_A 9 VIDSIVSAINPQK-----GQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAM 77 (252)
T ss_dssp HHHHHHHHHCCCT-----TCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGG
T ss_pred HHHHHHHhcCCCC-----cCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchh
Confidence 5566677766654 7899999999999999 64 4 456 999999999999999876432 47999999999
Q ss_pred CCCCCCC-----ccceEEccc
Q 017428 219 QQPFPDG-----QFDLVWSME 234 (371)
Q Consensus 219 ~~~~~~~-----~fD~v~~~~ 234 (371)
+.++++. ..|.|+++.
T Consensus 78 ~~~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 78 TFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp GCCHHHHHHHHTSCEEEEEEC
T ss_pred hCCHHHhhcccCCceEEEECC
Confidence 8765421 235666554
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.65 E-value=1.2e-07 Score=94.14 Aligned_cols=100 Identities=14% Similarity=0.098 Sum_probs=74.0
Q ss_pred CCEEEEECCCcChHHHHH---HHHcC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-
Q 017428 159 PKNVVDVGCGIGGSSRYL---AKKFG-----------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP- 223 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l---~~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 223 (371)
+..|||||||+|.+.... ++..+ .+|++||.++......+.+.. +++.++|+++.+|+++...+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 568999999999996432 22112 389999999977765555554 77878899999999998653
Q ss_pred ----CCccceEEccccccCcC---CHHHHHHHHHHhcCCCcEEE
Q 017428 224 ----DGQFDLVWSMESGEHMP---DKSKFVSELARVTAPAGTII 260 (371)
Q Consensus 224 ----~~~fD~v~~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~ 260 (371)
.+++|+|++=.+ ..+- -....+..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 588999987543 3332 23568888889999999754
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.65 E-value=6.3e-08 Score=95.40 Aligned_cols=105 Identities=19% Similarity=0.197 Sum_probs=81.1
Q ss_pred CEEEEECCCcChHHHHHHHHc----------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-C
Q 017428 160 KNVVDVGCGIGGSSRYLAKKF----------------GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-F 222 (371)
Q Consensus 160 ~~VLDlG~GtG~~~~~l~~~~----------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~ 222 (371)
.+|||.+||+|.+...+++.+ ...++|+|+++.++..|+.++...|+..++.+.++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 499999999999988876532 35799999999999999999988887655555788876543 4
Q ss_pred CCCccceEEccccccC-------------------------cC---C-HHHHHHHHHHhcCCCcEEEEEec
Q 017428 223 PDGQFDLVWSMESGEH-------------------------MP---D-KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 223 ~~~~fD~v~~~~~l~~-------------------------~~---~-~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+..+||+|+++--+.. ++ + .-.+++.+.+.|+|||++.++..
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 5688999998643332 11 0 12689999999999999988763
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.61 E-value=4.4e-07 Score=89.24 Aligned_cols=107 Identities=16% Similarity=0.088 Sum_probs=84.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCC--C-CCCCccce
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF----GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQ--P-FPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~--~-~~~~~fD~ 229 (371)
++.+|||.+||+|.+...+++.. ...++|+|+++.+...|+.++.-.|+. +++.+..+|.... | .....||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 47899999999999999888874 468999999999999999998888875 4688999998765 3 34678999
Q ss_pred EEccccccC-------------------cC---C-HHHHHHHHHHhcC-CCcEEEEEec
Q 017428 230 VWSMESGEH-------------------MP---D-KSKFVSELARVTA-PAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~-------------------~~---~-~~~~l~~~~~~Lk-pgG~l~i~~~ 264 (371)
|+++--+.. ++ + .-.+++.+.+.|+ |||++.++..
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 998622210 10 1 1248999999999 9999988763
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.48 E-value=4.8e-07 Score=81.28 Aligned_cols=103 Identities=14% Similarity=0.107 Sum_probs=80.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc------CCEEEEEeCCHH--------------------------HHHHHHHHHHHcCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF------GAKCQGITLSPV--------------------------QAQRANALAAARGL 206 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~------~~~v~gvD~s~~--------------------------~~~~a~~~~~~~~~ 206 (371)
+.+|||+|+..|..++.++..+ +.+|+++|..+. .++.+++++++.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 6799999999999999887653 468999996421 46778999999998
Q ss_pred C-CCeEEEEcCCCC-CC-CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 207 A-DKVSFQVGDALQ-QP-FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 207 ~-~~v~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
. ++++++.+|+.+ ++ ++.++||+|++-.-. .......++.+...|+|||++++-+
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcC
Confidence 4 899999999865 23 445789999987532 1234578999999999999888855
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.33 E-value=1.8e-06 Score=79.79 Aligned_cols=93 Identities=15% Similarity=0.123 Sum_probs=68.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
++++|||+||++|+|+..++++ +..|++||+.+-.. ... -.++|.+++.|+.....+.++||+|+|-.+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~l~~-~l~-------~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-- 279 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGPMAQ-SLM-------DTGQVTWLREDGFKFRPTRSNISWMVCDMV-- 279 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSCCCH-HHH-------TTTCEEEECSCTTTCCCCSSCEEEEEECCS--
T ss_pred CCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhhcCh-hhc-------cCCCeEEEeCccccccCCCCCcCEEEEcCC--
Confidence 5899999999999999999987 88999999875221 111 125899999999887666788999998654
Q ss_pred CcCCHHHHHHHHHHhcCCC---cEEEEEe
Q 017428 238 HMPDKSKFVSELARVTAPA---GTIIIVT 263 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~Lkpg---G~l~i~~ 263 (371)
.++..++.-+.++|..| +.++...
T Consensus 280 --~~p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 280 --EKPAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp --SCHHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred --CChHHhHHHHHHHHhccccceEEEEEE
Confidence 34556666666655554 5444443
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.33 E-value=2.4e-07 Score=81.97 Aligned_cols=116 Identities=17% Similarity=0.078 Sum_probs=73.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (371)
.+.++.++..++ ++.+|||||||+|.|+..+++..+ ..|+|+|++..+...+... .. ...++.....++..
T Consensus 78 KL~ei~eK~~Lk-----~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~--~g~~ii~~~~~~dv 149 (282)
T 3gcz_A 78 KLRWMEERGYVK-----PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TT--LGWNLIRFKDKTDV 149 (282)
T ss_dssp HHHHHHHTTSCC-----CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CB--TTGGGEEEECSCCG
T ss_pred HHHHHHHhcCCC-----CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-cc--CCCceEEeeCCcch
Confidence 344555554444 478999999999999999887553 4689999986532211100 00 01133334433333
Q ss_pred CCCCCCccceEEccccccCcCCH-------HHHHHHHHHhcCCC--cEEEEEecc
Q 017428 220 QPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA--GTIIIVTWC 265 (371)
Q Consensus 220 ~~~~~~~fD~v~~~~~l~~~~~~-------~~~l~~~~~~Lkpg--G~l~i~~~~ 265 (371)
..++.+++|+|++..+.. .... ..++.-+.++|+|| |.+++-.+.
T Consensus 150 ~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 150 FNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred hhcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 335578899999977665 3221 13577778999999 999997653
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.31 E-value=1.1e-06 Score=78.16 Aligned_cols=85 Identities=18% Similarity=0.212 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
++.++++.+.+++ +..+||.+||.|..+..++++ +.+|+|+|.++.+++.|++ ++. +++.++++++.++
T Consensus 10 Ll~e~le~L~~~~-----gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l 78 (285)
T 1wg8_A 10 LYQEALDLLAVRP-----GGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHL 78 (285)
T ss_dssp THHHHHHHHTCCT-----TCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGH
T ss_pred HHHHHHHhhCCCC-----CCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchH
Confidence 4567777776654 889999999999999999998 7899999999999999988 533 5899999999886
Q ss_pred C-----CCCCccceEEccccc
Q 017428 221 P-----FPDGQFDLVWSMESG 236 (371)
Q Consensus 221 ~-----~~~~~fD~v~~~~~l 236 (371)
+ ...+++|.|++...+
T Consensus 79 ~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECSC
T ss_pred HHHHHHcCCCCcCEEEeCCcc
Confidence 3 223579999976544
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.30 E-value=1.5e-06 Score=87.51 Aligned_cols=106 Identities=8% Similarity=0.016 Sum_probs=75.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC----CEEEEEeCCHHHHHHHH--HHHHH----cCCCCCeEEEEcCCCCC-CCCCCc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG----AKCQGITLSPVQAQRAN--ALAAA----RGLADKVSFQVGDALQQ-PFPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~----~~v~gvD~s~~~~~~a~--~~~~~----~~~~~~v~~~~~d~~~~-~~~~~~ 226 (371)
++.+|||.|||+|.++..+++.++ .+++|+|+++.+++.|+ ..+.. .++ ....+...|+... +...+.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi-~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN-NAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT-BCCEEECCCGGGCCGGGGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC-CcceEEecchhcccccccCC
Confidence 378999999999999999988753 47999999999999994 33322 222 1235556666553 234578
Q ss_pred cceEEccccccC-cC---------------------------C-HHHHHHHHHHhcCCCcEEEEEec
Q 017428 227 FDLVWSMESGEH-MP---------------------------D-KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~-~~---------------------------~-~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
||+|+++--+.. .. + ...+++.+.+.|+|||++.++..
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 999999754421 10 1 23478889999999999999873
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.26 E-value=1.5e-06 Score=80.75 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=84.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCC-----CCeEEEEcCCCCCC-CCCCccceE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLA-----DKVSFQVGDALQQP-FPDGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~-~~~~~fD~v 230 (371)
++.+|||+.+|.|+-+..+++.. +..|+++|+++.-+...+++++..+.. .++.+...|...++ ...+.||.|
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 48999999999999999998865 357999999999999999999877642 47888888887753 345789999
Q ss_pred Ecccc--------ccCcCC----------------HHHHHHHHHHhcCCCcEEEEEeccC
Q 017428 231 WSMES--------GEHMPD----------------KSKFVSELARVTAPAGTIIIVTWCH 266 (371)
Q Consensus 231 ~~~~~--------l~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~ 266 (371)
++--- +..-++ ...+|.++.+.|||||.|+.++.+.
T Consensus 228 LlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 228 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 86211 111011 1367888999999999999988654
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.15 E-value=1.2e-06 Score=69.63 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=63.9
Q ss_pred CCEEEEECCCcC-hHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-CccceEEccccc
Q 017428 159 PKNVVDVGCGIG-GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD-GQFDLVWSMESG 236 (371)
Q Consensus 159 ~~~VLDlG~GtG-~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~v~~~~~l 236 (371)
+.+|||||||.| ..+..|++..+..|+++|+++..+ .++..|+.+..... +.||+|++...-
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av----------------~~v~dDiF~P~~~~Y~~~DLIYsirPP 99 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHG----------------GIVRDDITSPRMEIYRGAALIYSIRPP 99 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSST----------------TEECCCSSSCCHHHHTTEEEEEEESCC
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCcccc----------------ceEEccCCCCcccccCCcCEEEEcCCC
Confidence 679999999999 599999985589999999998542 28899998843221 479999765432
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEeccCCC
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRD 268 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 268 (371)
++....+.++.+. -|.-++|.....+.
T Consensus 100 ---~El~~~i~~lA~~--v~adliI~pL~~E~ 126 (153)
T 2k4m_A 100 ---AEIHSSLMRVADA--VGARLIIKPLTGED 126 (153)
T ss_dssp ---TTTHHHHHHHHHH--HTCEEEEECBTTBC
T ss_pred ---HHHHHHHHHHHHH--cCCCEEEEcCCCCc
Confidence 3445555555553 35778887765443
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.13 E-value=3.3e-06 Score=75.15 Aligned_cols=104 Identities=17% Similarity=0.182 Sum_probs=66.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+||||||++|.|+..+++..+ ..|+|+|+...+...... ... ...++.....++....+..+.+|+|++..+.
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~--~~~~iv~~~~~~di~~l~~~~~DlVlsD~AP 157 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT--LGWNIVKFKDKSNVFTMPTEPSDTLLCDIGE 157 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB--TTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc--cCCceEEeecCceeeecCCCCcCEEeecCcC
Confidence 589999999999999999998643 468899997532110000 000 0012323333322223456789999997655
Q ss_pred cCcCCH-------HHHHHHHHHhcCCC-cEEEEEecc
Q 017428 237 EHMPDK-------SKFVSELARVTAPA-GTIIIVTWC 265 (371)
Q Consensus 237 ~~~~~~-------~~~l~~~~~~Lkpg-G~l~i~~~~ 265 (371)
. ...+ ..++.-+.++|+|| |.+++-.|.
T Consensus 158 n-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 158 S-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp C-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 5 3322 24577778999999 999997653
No 292
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.11 E-value=4.2e-07 Score=103.84 Aligned_cols=146 Identities=16% Similarity=0.094 Sum_probs=74.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccceE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v 230 (371)
+..+|||||.|+|..+..+.+.++ .+++..|+|+...+.|+++++.. .+.....|..+. ++..++||+|
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeEE
Confidence 478999999999998777666542 37899999999888888877653 244433454442 3445779999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS 310 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 310 (371)
++.+++|..++....+.+++++|||||++++.+....... .....+ +..... ....+.+.++|.++|+++|
T Consensus 1316 ia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~---g~~~~~----~~~~~r--~~~~~~~~~~w~~~l~~~g 1386 (2512)
T 2vz8_A 1316 VCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPL---GEMVGF----LTSPEQ--GGRHLLSQDQWESLFAGAS 1386 (2512)
T ss_dssp EEECC--------------------CCEEEEEEC-----------------------------------CTTTTSSTTTT
T ss_pred EEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccc---cccccc----cccccc--cCCcccCHHHHHHHHHhCC
Confidence 9999998888889999999999999999999874321100 000001 100000 0012457778889999999
Q ss_pred CceEEE
Q 017428 311 LEDIKA 316 (371)
Q Consensus 311 F~~v~~ 316 (371)
|..+..
T Consensus 1387 f~~~~~ 1392 (2512)
T 2vz8_A 1387 LHLVAL 1392 (2512)
T ss_dssp EEEEEE
T ss_pred Cceeee
Confidence 998765
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.10 E-value=4.4e-06 Score=77.59 Aligned_cols=106 Identities=13% Similarity=0.074 Sum_probs=78.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-----CC--CCCeEEEEcCCCCCC----CCCCc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-----GL--ADKVSFQVGDALQQP----FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~--~~~v~~~~~d~~~~~----~~~~~ 226 (371)
++.+||=||.|.|..+..+.+....+|+.||+++..++.+++.+... .. .++++++.+|+...- -..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 46899999999999999998854678999999999999999875321 11 146889999976531 12467
Q ss_pred cceEEccccccC-------cCC---HHHHHHHHHHhcCCCcEEEEEe
Q 017428 227 FDLVWSMESGEH-------MPD---KSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 227 fD~v~~~~~l~~-------~~~---~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
||+|+.-..-.. ... -..+++.+++.|+|||.++...
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 999997532111 111 1578899999999999998754
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.06 E-value=1.1e-05 Score=71.37 Aligned_cols=115 Identities=17% Similarity=0.276 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~ 218 (371)
.+..+.+...+++ +.+||||||++|.|+.+++...+ ..|+|+|+-..-.+.- ...++.++ +.|.+... |+.
T Consensus 82 KL~ei~~~~~l~~-----~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~ 154 (321)
T 3lkz_A 82 KLRWLVERRFLEP-----VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVF 154 (321)
T ss_dssp HHHHHHHTTSCCC-----CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTT
T ss_pred HHHHHHHhcCCCC-----CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHh
Confidence 4455555544544 78999999999999998888764 4699999976511000 00000111 24778877 876
Q ss_pred CCCCCCCccceEEccccccCcCCHH-------HHHHHHHHhcCCC-cEEEEEecc
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPDKS-------KFVSELARVTAPA-GTIIIVTWC 265 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~~~-------~~l~~~~~~Lkpg-G~l~i~~~~ 265 (371)
.++ ..++|+|+|--. +.-+++. ++|+-+.++|++| |-+++-.++
T Consensus 155 ~l~--~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 155 YRP--SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp SSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred hCC--CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 664 266999998665 5445431 3667778999999 888886543
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.98 E-value=0.00011 Score=72.04 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=83.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHHHHHcCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--------------GAKCQGITLSPVQAQRANALAAARGL 206 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~ 206 (371)
+++.+++.+... ++.+|+|-+||+|.+.....+.. ...++|+|+++.+...|+.+.--+|+
T Consensus 205 Vv~lmv~l~~p~-----~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 205 VVRFMVEVMDPQ-----LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp HHHHHHHHHCCC-----TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhccC-----CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 334444444433 37799999999999988776543 24699999999999999988777776
Q ss_pred CCCeEEEEcCCCCCCC----CCCccceEEccccccCc---------------CCH-HHHHHHHHHhcC-------CCcEE
Q 017428 207 ADKVSFQVGDALQQPF----PDGQFDLVWSMESGEHM---------------PDK-SKFVSELARVTA-------PAGTI 259 (371)
Q Consensus 207 ~~~v~~~~~d~~~~~~----~~~~fD~v~~~~~l~~~---------------~~~-~~~l~~~~~~Lk-------pgG~l 259 (371)
. ...+..+|....+. ....||+|+++--+..- .+. ..+++.+.+.|| |||++
T Consensus 280 ~-~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~ 358 (530)
T 3ufb_A 280 E-YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRA 358 (530)
T ss_dssp S-CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEE
T ss_pred c-cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceE
Confidence 3 45677888765442 24579999997554321 111 356788888887 79999
Q ss_pred EEEec
Q 017428 260 IIVTW 264 (371)
Q Consensus 260 ~i~~~ 264 (371)
.++..
T Consensus 359 avVlP 363 (530)
T 3ufb_A 359 AVVVP 363 (530)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88864
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.96 E-value=1.2e-05 Score=69.87 Aligned_cols=94 Identities=21% Similarity=0.297 Sum_probs=61.7
Q ss_pred CCCEEEEECCCcChHHHHHHHH--cC---CEEEEEe--CCHHHHHHHHHHHHHcCCCCCe---EEEEc-CCCCCCCCCCc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKK--FG---AKCQGIT--LSPVQAQRANALAAARGLADKV---SFQVG-DALQQPFPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~--~~---~~v~gvD--~s~~~~~~a~~~~~~~~~~~~v---~~~~~-d~~~~~~~~~~ 226 (371)
|+.+|||+||+.|.|+...++. .+ ..++|+| +.|.. .++.++ .|.++ |+.+++ ...
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~-----------~~~~Gv~~i~~~~G~Df~~~~--~~~ 139 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPML-----------MQSYGWNIVTMKSGVDVFYKP--SEI 139 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCC-----------CCSTTGGGEEEECSCCGGGSC--CCC
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCc-----------ccCCCceEEEeeccCCccCCC--CCC
Confidence 5999999999999999999987 31 2345555 22200 011234 45546 988753 467
Q ss_pred cceEEccccccCcCCH----H---HHHHHHHHhcCCCc-EEEEEecc
Q 017428 227 FDLVWSMESGEHMPDK----S---KFVSELARVTAPAG-TIIIVTWC 265 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~----~---~~l~~~~~~LkpgG-~l~i~~~~ 265 (371)
+|+|+|-.+-. -.++ . .++.-+.++|+||| .+++-.|.
T Consensus 140 ~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 140 SDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 99999865443 3222 1 25666779999999 88887654
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.91 E-value=0.00011 Score=63.01 Aligned_cols=114 Identities=18% Similarity=0.207 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~ 218 (371)
.+..+.++..+++ +.+||||||++|.|+..++...+ ..|+|+|+-..-.+.- ...+..|+ +.+.|..+ |+.
T Consensus 66 KL~ei~ek~~l~~-----g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw-n~v~fk~gvDv~ 138 (267)
T 3p8z_A 66 KLQWFVERNMVIP-----EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW-NIVKLMSGKDVF 138 (267)
T ss_dssp HHHHHHHTTSSCC-----CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT-TSEEEECSCCGG
T ss_pred HHHHHHHhcCCCC-----CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc-CceEEEecccee
Confidence 4455555554544 88999999999999999888774 4699999976422100 00111233 57999999 976
Q ss_pred CCCCCCCccceEEccccccCcCCH-------HHHHHHHHHhcCCCcEEEEEecc
Q 017428 219 QQPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 219 ~~~~~~~~fD~v~~~~~l~~~~~~-------~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
..+ ..++|.|+|--.= .-+++ -++|+-+.++|++ |-+++-.++
T Consensus 139 ~~~--~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 139 YLP--PEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp GCC--CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred ecC--CccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 654 3679999986544 22332 1366777899999 777775543
No 298
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.87 E-value=0.00026 Score=65.17 Aligned_cols=150 Identities=15% Similarity=0.049 Sum_probs=100.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--------------------CCCCeEEEEcCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG--------------------LADKVSFQVGDA 217 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--------------------~~~~v~~~~~d~ 217 (371)
...|+.+|||.......+.... +..++-||. |+.++.-++.+...+ .+++..++..|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 6789999999999999998764 567788888 888888777776642 136899999999
Q ss_pred CCCCC---------CCCccceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHH
Q 017428 218 LQQPF---------PDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK 286 (371)
Q Consensus 218 ~~~~~---------~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
.+... ..+...++++-.++.+++. ...+++.+.+.. |+|.+++.+...+.. + ...+.......+..
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~-~-~~~fg~~m~~~l~~ 253 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQ-P-NDRFGAIMQSNLKE 253 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCS-T-TCCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCC-C-cchHHHHHHHHhhc
Confidence 87421 1245677888888888854 467888888876 788888777654311 1 11221111111221
Q ss_pred -Hhhc-cCCCCCCCHHHHHHHHHhCCCc
Q 017428 287 -ICDA-YYLPAWCSTADYVKLLQSLSLE 312 (371)
Q Consensus 287 -~~~~-~~~~~~~~~~~~~~ll~~aGF~ 312 (371)
.... .....+.++++..+.|.++||.
T Consensus 254 ~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 254 SRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred ccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 1111 1111346899999999999997
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.84 E-value=6.9e-05 Score=68.04 Aligned_cols=59 Identities=25% Similarity=0.216 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG 205 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 205 (371)
.+++.++.... . ++..|||++||+|..+..+++. +.+++|+|+++.+++.|++++....
T Consensus 223 ~l~~~~i~~~~-~-----~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFS-F-----VGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHC-C-----TTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhC-C-----CCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 45666666654 2 3789999999999999998775 8899999999999999999987753
No 300
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.45 E-value=0.00012 Score=66.61 Aligned_cols=87 Identities=16% Similarity=0.141 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
+++++++.+.+++ +..++|..||.|..+..+++.+ ..+|+|+|.++.+++.|+ ++ ..+++.++++++.
T Consensus 45 Ll~Evl~~L~i~p-----ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 45 LLDEAVNGLNIRP-----DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFS 114 (347)
T ss_dssp TTHHHHHHTCCCT-----TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGG
T ss_pred cHHHHHHhhCCCC-----CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHH
Confidence 5677788877765 8999999999999999999986 469999999999999884 33 2368999999987
Q ss_pred CCC--CC----CCccceEEcccccc
Q 017428 219 QQP--FP----DGQFDLVWSMESGE 237 (371)
Q Consensus 219 ~~~--~~----~~~fD~v~~~~~l~ 237 (371)
++. +. .+++|.|++...+.
T Consensus 115 ~l~~~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 115 ALGEYVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp GHHHHHHHTTCTTCEEEEEEECSCC
T ss_pred HHHHHHHhcCCCCcccEEEECCccC
Confidence 752 11 13699999876654
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.35 E-value=0.0021 Score=58.43 Aligned_cols=149 Identities=14% Similarity=0.048 Sum_probs=95.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCeEEEEcCCCCCCC---------CCCcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL--ADKVSFQVGDALQQPF---------PDGQF 227 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~---------~~~~f 227 (371)
...|++||||-=..+..+...-+..|+-|| .|..++..++.+...+. ..+..++..|+.+ .+ ..+..
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 356999999987776555421146899999 49999999998876432 3578899999987 31 11233
Q ss_pred ceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhcc---------CCCCC
Q 017428 228 DLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY---------YLPAW 296 (371)
Q Consensus 228 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 296 (371)
-++++-.+++++++ ...+++.+...+.||+.|++.....+. +. . . .............. .....
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~--~~-~-~-~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 255 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHG--DE-W-R-EQMQLRFRRVSDALGFEQAVDVQELIYH 255 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTC--SH-H-H-HHHHHHHHHHHC-----------CCTTC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCC--cc-h-h-HHHHHHHHHHHHHcCCcCCCCccccccC
Confidence 46777788888864 467899999988999988886543321 10 0 0 00111120111111 11112
Q ss_pred CC-HHHHHHHHHhCCCceE
Q 017428 297 CS-TADYVKLLQSLSLEDI 314 (371)
Q Consensus 297 ~~-~~~~~~ll~~aGF~~v 314 (371)
.+ .+++.+.|.+.||+.+
T Consensus 256 ~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 256 DENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp CTTCCCHHHHHTTTTEEEE
T ss_pred CCChHHHHHHHHHCcCccc
Confidence 25 7899999999999987
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.27 E-value=0.0007 Score=60.08 Aligned_cols=59 Identities=20% Similarity=0.223 Sum_probs=47.9
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG 205 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 205 (371)
.+++.++.... . ++..|||..||+|..+....+. +.+++|+|+++..++.|+++++..+
T Consensus 200 ~l~~~~i~~~~-~-----~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-N-----PNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-C-----TTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-C-----CCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 45666666554 2 3889999999999999988775 8899999999999999999987654
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.22 E-value=0.0011 Score=61.31 Aligned_cols=76 Identities=12% Similarity=0.088 Sum_probs=59.1
Q ss_pred HHHHHHHHcCCCCC-CCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 017428 141 MIEETLRFAGVSED-PTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (371)
Q Consensus 141 ~~~~~l~~~~~~~~-~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (371)
+++.+++.+.+.+. ...++..|||||.|.|.++..|++.. ..+|+++++++..+...++.. . .++++++.+|+.
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l 115 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPY 115 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTT
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCcc
Confidence 56777777665420 00135899999999999999999875 468999999999999888776 2 258999999996
Q ss_pred CC
Q 017428 219 QQ 220 (371)
Q Consensus 219 ~~ 220 (371)
+.
T Consensus 116 ~~ 117 (353)
T 1i4w_A 116 DW 117 (353)
T ss_dssp CH
T ss_pred ch
Confidence 54
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.20 E-value=0.0021 Score=56.98 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=61.0
Q ss_pred CCCEEEEECC------CcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccce
Q 017428 158 RPKNVVDVGC------GIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG~------GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 229 (371)
.+++|||+|+ -.|.+ .+.+.. ++.|+++|+.+-.. ... .++++|..... ..++||+
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s------------da~-~~IqGD~~~~~-~~~k~DL 172 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS------------DAD-STLIGDCATVH-TANKWDL 172 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC------------SSS-EEEESCGGGEE-ESSCEEE
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc------------CCC-eEEEccccccc-cCCCCCE
Confidence 4899999997 44553 233323 36999999987321 123 45999976543 3488999
Q ss_pred EEccccc---cCc--CC------HHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESG---EHM--PD------KSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l---~~~--~~------~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|++-..- .+. .. .+.++.-+.++|+|||.+++-.+
T Consensus 173 VISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 173 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp EEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 9974322 221 11 36677788999999999999764
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.18 E-value=0.0016 Score=58.75 Aligned_cols=126 Identities=15% Similarity=0.118 Sum_probs=77.8
Q ss_pred CCEEEEECCCcChHHHHHHHH---c--CC--EEEEEeCCH--------H-HHHHHHHHHHHcC--CCCC--eEEEEcCCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKK---F--GA--KCQGITLSP--------V-QAQRANALAAARG--LADK--VSFQVGDAL 218 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~---~--~~--~v~gvD~s~--------~-~~~~a~~~~~~~~--~~~~--v~~~~~d~~ 218 (371)
.-+|||+|-|||......... . .. +++.+|..+ . ..+..+....... -..+ +.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 578999999999975443321 1 23 456666421 1 1122222222210 0122 456778875
Q ss_pred CC-C-CCCCccceEEccccccCcCCH----HHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHHHHHHHhhccC
Q 017428 219 QQ-P-FPDGQFDLVWSMESGEHMPDK----SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY 292 (371)
Q Consensus 219 ~~-~-~~~~~fD~v~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (371)
+. + +.+..||+|+.-. +.--.++ ..+++.++++++|||.+.-.
T Consensus 177 ~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTY------------------------------ 225 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSY------------------------------ 225 (308)
T ss_dssp HHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEES------------------------------
T ss_pred HHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEE------------------------------
Confidence 52 2 3445799998753 3332333 68999999999999987642
Q ss_pred CCCCCCHHHHHHHHHhCCCceEEEEec
Q 017428 293 LPAWCSTADYVKLLQSLSLEDIKAEDW 319 (371)
Q Consensus 293 ~~~~~~~~~~~~ll~~aGF~~v~~~~~ 319 (371)
.....+++.|+++||++..+.-+
T Consensus 226 ----taag~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 226 ----SSSLSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp ----CCCHHHHHHHHHTTCEEEEEECC
T ss_pred ----eCcHHHHHHHHHCCCEEEecCCC
Confidence 23456889999999998877544
No 306
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.57 E-value=0.0093 Score=56.17 Aligned_cols=99 Identities=16% Similarity=0.029 Sum_probs=66.5
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C------CCCCccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P------FPDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~fD 228 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .| ...+...-.+. . .....||
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG----a~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG----FETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT----CEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC----CcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 489999999986 8888889887787 99999999998887754 33 23332211111 0 0123699
Q ss_pred eEEccccccCc--------CCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 229 LVWSMESGEHM--------PDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 229 ~v~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+-.-.-... .++...++.+.+.|++||++++...
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 99855432210 0123568889999999999887643
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.52 E-value=0.012 Score=54.73 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=65.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CCCCCccceE
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~v 230 (371)
++.+||-+|+|. |..+..+++..++ .|+++|.++..++.+++. |. -.++..+-.+. ....+.+|+|
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GA---THVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CC---CEEecCCccCHHHHHHHhcCCCCcEE
Confidence 489999999986 8888888887787 799999999998887653 32 11222111111 0112379998
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+-.-. ....++.+.+.|+|||.+++...
T Consensus 263 id~~g------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 263 LESTG------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EECSC------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred EECCC------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 75432 13568889999999999988653
No 308
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.46 E-value=0.017 Score=54.33 Aligned_cols=99 Identities=21% Similarity=0.158 Sum_probs=67.9
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC------CCCCccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP------FPDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~------~~~~~fD 228 (371)
++.+||-+|+|. |..+..+++..++ .|+++|.+++.++.+++ .|. ..+...-.+ .. .....+|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHHhCCCCCC
Confidence 489999999876 8888889888787 79999999998888765 342 322211111 00 1124699
Q ss_pred eEEcccccc---------CcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 229 LVWSMESGE---------HMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 229 ~v~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+-.-.-. |.+++...++.+.+.|++||.+++...
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 998654321 223455678899999999999987653
No 309
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.16 E-value=0.32 Score=44.41 Aligned_cols=151 Identities=12% Similarity=0.030 Sum_probs=94.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC----------------------CCCCeEEEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARG----------------------LADKVSFQV 214 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----------------------~~~~v~~~~ 214 (371)
...|+-+|||.-.....+.... +..++=||. |+.++.=++.+...+ .+.+..++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 5789999999988888877642 467778887 555554344443210 146788999
Q ss_pred cCCCCCC----------CCCCccceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCccccChHHHH
Q 017428 215 GDALQQP----------FPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQE 282 (371)
Q Consensus 215 ~d~~~~~----------~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 282 (371)
.|+.+.. +..+..-++++=.++.+++. ...+++.+.+.. |+|.+++.+...+. ..+. .
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~-----d~fg----~ 239 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG-----DRFG----Q 239 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT-----SHHH----H
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC-----CHHH----H
Confidence 9997731 22334456777778888853 467888888766 55666676755321 1111 1
Q ss_pred HHHHHhhccCCC-----CCCCHHHHHHHHHhCCCceEEEEecC
Q 017428 283 LLKKICDAYYLP-----AWCSTADYVKLLQSLSLEDIKAEDWS 320 (371)
Q Consensus 283 ~~~~~~~~~~~~-----~~~~~~~~~~ll~~aGF~~v~~~~~~ 320 (371)
.+.......+.+ .+.+.++..+.|.++||..+...+..
T Consensus 240 ~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~ 282 (334)
T 3iei_A 240 IMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMM 282 (334)
T ss_dssp HHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHH
T ss_pred HHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecHH
Confidence 121222222222 23578999999999999988765543
No 310
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.02 E-value=0.1 Score=45.71 Aligned_cols=105 Identities=10% Similarity=0.107 Sum_probs=70.9
Q ss_pred CCEEEEECCCcChHHHHHHHH---c-----CCEEEEEe-----CCHH-------------------HHHHHHHHH-----
Q 017428 159 PKNVVDVGCGIGGSSRYLAKK---F-----GAKCQGIT-----LSPV-------------------QAQRANALA----- 201 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~---~-----~~~v~gvD-----~s~~-------------------~~~~a~~~~----- 201 (371)
+..|+|+|+-.|..+..++.. + ..+|+++| +.+. ..+..++.+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 679999999999988887652 1 36899999 3210 011112211
Q ss_pred -HHcCC-CCCeEEEEcCCCCC-C-----CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 202 -AARGL-ADKVSFQVGDALQQ-P-----FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 202 -~~~~~-~~~v~~~~~d~~~~-~-----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+..+. ++++.++.+++.+. + .+.++||+|++-.-. .......++.+...|+|||++++-++.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 12343 47899999998663 2 245679999886532 233466799999999999999986643
No 311
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.94 E-value=0.03 Score=51.53 Aligned_cols=90 Identities=19% Similarity=0.198 Sum_probs=64.5
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ .|.. . ++ .+... +. ..+|+|+-.-.-
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~-v~-~~~~~--~~-~~~D~vid~~g~ 244 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK--H-FY-TDPKQ--CK-EELDFIISTIPT 244 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS--E-EE-SSGGG--CC-SCEEEEEECCCS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC--e-ec-CCHHH--Hh-cCCCEEEECCCc
Confidence 489999999876 788888888779999999999988887765 3431 2 22 33222 22 379999854322
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
. ..++.+.+.|+|||.+++...
T Consensus 245 ~------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 245 H------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp C------CCHHHHHTTEEEEEEEEECCC
T ss_pred H------HHHHHHHHHHhcCCEEEEECC
Confidence 1 246788899999999998753
No 312
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.90 E-value=0.041 Score=51.15 Aligned_cols=98 Identities=21% Similarity=0.262 Sum_probs=68.4
Q ss_pred HHcCCCCCCCCCCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---
Q 017428 147 RFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--- 221 (371)
Q Consensus 147 ~~~~~~~~~~~~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 221 (371)
....+++ +.+||-+|+|. |..+..+++..|+ .|+++|.++...+.+++ .|.. ..+ |..+..
T Consensus 176 ~~~~~~~-----g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~ 241 (370)
T 4ej6_A 176 DLSGIKA-----GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT---ATV--DPSAGDVVE 241 (370)
T ss_dssp HHHTCCT-----TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS---EEE--CTTSSCHHH
T ss_pred HhcCCCC-----CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC---EEE--CCCCcCHHH
Confidence 4455554 89999999875 7788888887787 89999999998887766 3431 122 221111
Q ss_pred -------CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 222 -------FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 222 -------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
...+.+|+|+-.-. . ...++.+.+.|++||.+++...
T Consensus 242 ~i~~~~~~~~gg~Dvvid~~G-----~-~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 242 AIAGPVGLVPGGVDVVIECAG-----V-AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp HHHSTTSSSTTCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECSC
T ss_pred HHHhhhhccCCCCCEEEECCC-----C-HHHHHHHHHHhccCCEEEEEec
Confidence 22347999985421 1 3568889999999999998654
No 313
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.87 E-value=0.026 Score=47.25 Aligned_cols=90 Identities=19% Similarity=0.221 Sum_probs=60.1
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||..|+ |.|..+..++...|++|+++|.+++..+.+++ .+. .. . .|..+.. .....+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~~-~--~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGV--EY-V--GDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCC--SE-E--EETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC--CE-E--eeCCcHHHHHHHHHHhCCCCC
Confidence 4889999994 44666666666558999999999887766543 232 11 1 2332211 112469
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|+|+.+.. ...++.+.+.|+|||++++..
T Consensus 109 D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSLA-------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECCC-------THHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECCc-------hHHHHHHHHHhccCCEEEEEc
Confidence 99986532 146788999999999998864
No 314
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.86 E-value=0.003 Score=56.15 Aligned_cols=100 Identities=12% Similarity=0.010 Sum_probs=76.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC---CCCCccceEEccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP---FPDGQFDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~---~~~~~fD~v~~~~ 234 (371)
+..+||+=+|+|.+++.+.+. +.+++.+|.++..++..+++++. ..+++++..|... +. -+..+||+|++-=
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 567999999999999999885 57999999999999988887754 3579999999644 11 1345799999876
Q ss_pred cccCcCCHHHHHHHHHH--hcCCCcEEEEE
Q 017428 235 SGEHMPDKSKFVSELAR--VTAPAGTIIIV 262 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~~--~LkpgG~l~i~ 262 (371)
-.+.-.+..++++.+.+ .+.|+|.+++=
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEEE
Confidence 55543466677766665 45799998884
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.82 E-value=0.077 Score=48.86 Aligned_cols=94 Identities=22% Similarity=0.228 Sum_probs=64.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCCC------CC---CCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGD-ALQQP------FP---DGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d-~~~~~------~~---~~~ 226 (371)
++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++ .|.. .++..+ ..+.. .. ...
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhccccCCC
Confidence 389999999875 778888888778899999999998887764 3431 222211 01110 11 246
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+|+-.-. . ...++.+.+.|+|+|.+++...
T Consensus 241 ~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 241 PNVTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp CSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 999875432 1 3467888999999999988653
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.82 E-value=0.025 Score=51.92 Aligned_cols=92 Identities=18% Similarity=0.127 Sum_probs=65.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC------CCCccceE
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF------PDGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~v 230 (371)
++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ .|.. .++ |..+..+ ..+.+|+|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~i--~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAE---VAV--NARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEE--ETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCC---EEE--eCCCcCHHHHHHHhCCCCCEE
Confidence 489999999875 888889998889999999999998887765 3321 122 2222111 12368888
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+-... ....++.+.+.|+|||.+++...
T Consensus 237 id~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 237 LVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 75421 13578889999999999988653
No 317
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.78 E-value=0.034 Score=51.41 Aligned_cols=94 Identities=17% Similarity=0.134 Sum_probs=64.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC---CCC-----CCCCCcc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDA---LQQ-----PFPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-----~~~~~~f 227 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++..+- .+. ......+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHHhCCCC
Confidence 389999999885 7888888887787 99999999988887764 3431 2222110 010 0011468
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+-.-. . ...++.+.++|+|||.+++...
T Consensus 244 D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 244 EVTIECTG-----A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEec
Confidence 99875422 1 3467888999999999988653
No 318
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.66 E-value=0.071 Score=49.31 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=69.1
Q ss_pred HHcCCCCCCCCCCCEEEEECCCc-ChHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---
Q 017428 147 RFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--- 221 (371)
Q Consensus 147 ~~~~~~~~~~~~~~~VLDlG~Gt-G~~~~~l~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 221 (371)
....+++ +.+||=+|+|. |..+..+++..|++ |+++|.++...+.+++. .. .-+.+...+.....
T Consensus 173 ~~~~~~~-----g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~ 242 (363)
T 3m6i_A 173 QRAGVRL-----GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAK 242 (363)
T ss_dssp HHHTCCT-----TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHH
T ss_pred HHcCCCC-----CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHH
Confidence 4445554 88999999875 77888888877886 99999999999988874 21 12333221111100
Q ss_pred -----CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 222 -----FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 222 -----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.....+|+|+-.-. ....++.+.++|++||.+++...
T Consensus 243 ~v~~~t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 243 KIVESFGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHHHTSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred HHHHHhCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 12356999885422 13467889999999999998754
No 319
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.51 E-value=0.039 Score=50.91 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=67.2
Q ss_pred HHcCCCCCCCCCCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---
Q 017428 147 RFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--- 221 (371)
Q Consensus 147 ~~~~~~~~~~~~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 221 (371)
....+++ +.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++. |. -.++ |..+..
T Consensus 160 ~~~~~~~-----g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~ 225 (352)
T 3fpc_A 160 ELANIKL-----GDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GA---TDII--NYKNGDIVE 225 (352)
T ss_dssp HHTTCCT-----TCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TC---CEEE--CGGGSCHHH
T ss_pred HhcCCCC-----CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CC---ceEE--cCCCcCHHH
Confidence 4555554 89999999876 7788888887787 899999999888887663 32 1122 222211
Q ss_pred -----CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 222 -----FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 222 -----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.....+|+|+-.-.- ...++.+.+.|+|||.+++...
T Consensus 226 ~v~~~t~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 226 QILKATDGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp HHHHHTTTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHcCCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEecc
Confidence 122469999853221 2467888999999999998754
No 320
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.49 E-value=0.041 Score=55.68 Aligned_cols=125 Identities=22% Similarity=0.254 Sum_probs=79.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc-------------CCEEEEEeC---CHHHHHHH-----------HHHHHHcCC-----
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-------------GAKCQGITL---SPVQAQRA-----------NALAAARGL----- 206 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-------------~~~v~gvD~---s~~~~~~a-----------~~~~~~~~~----- 206 (371)
..+|+|+|.|+|.....+.+.. ..+++.++. +.+.+..+ ++.+..+..
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 5799999999999887766542 146899998 44444432 222322211
Q ss_pred -----CC---CeEEEEcCCCCC-C-CC---CCccceEEccccccCc-CC--HHHHHHHHHHhcCCCcEEEEEeccCCCCC
Q 017428 207 -----AD---KVSFQVGDALQQ-P-FP---DGQFDLVWSMESGEHM-PD--KSKFVSELARVTAPAGTIIIVTWCHRDLA 270 (371)
Q Consensus 207 -----~~---~v~~~~~d~~~~-~-~~---~~~fD~v~~~~~l~~~-~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 270 (371)
.. .+++..+|+.+. + +. +..+|+++.-..--.. ++ ...++..+.++++|||.+.-..
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 01 355667776542 2 21 4679999875422221 22 1689999999999999866421
Q ss_pred cCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 271 PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
....+++.|.++||.+....
T Consensus 212 ---------------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ---------------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ---------------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred ---------------------------CcHHHHHHHHhCCeEEEecc
Confidence 23467888999999877765
No 321
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.40 E-value=0.032 Score=51.79 Aligned_cols=94 Identities=21% Similarity=0.086 Sum_probs=65.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCccceE
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~v 230 (371)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++ .|. -.++..+..+.. .....+|+|
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa---~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA----LGA---DHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTC---SEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH----cCC---CEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 589999999875 778888888779999999999998888765 233 122222211110 123379999
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
+-.-.- ..+..+.+.|+|||.+++....
T Consensus 262 id~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 262 LEIAGG-------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEETTS-------SCHHHHHHHEEEEEEEEEECCC
T ss_pred EECCCh-------HHHHHHHHHhhcCCEEEEEecC
Confidence 865431 2467788999999999987643
No 322
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.34 E-value=0.059 Score=49.17 Aligned_cols=91 Identities=16% Similarity=0.171 Sum_probs=62.0
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC-------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP-------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~~f 227 (371)
++.+||-.|+ |.|..+..++...+++|+++|.+++.++.+++ .+. ... .|..+ .. ...+.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~~~---~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGF--DAA---FNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--SEE---EETTSCSCHHHHHHHHCTTCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--cEE---EecCCHHHHHHHHHHHhCCCC
Confidence 4899999997 45667777777668999999999988877633 232 121 23332 11 112469
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+.+..- ..++.+.+.|++||.+++...
T Consensus 216 d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 216 DCYFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred eEEEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 998865431 357888999999999988653
No 323
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.21 E-value=0.072 Score=53.73 Aligned_cols=125 Identities=19% Similarity=0.191 Sum_probs=78.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc-------------CCEEEEEeC---CHHHHHHH-----------HHHHHHcCCC----
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF-------------GAKCQGITL---SPVQAQRA-----------NALAAARGLA---- 207 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~-------------~~~v~gvD~---s~~~~~~a-----------~~~~~~~~~~---- 207 (371)
.-+|||+|-|+|.......+.. ..++++++. +.+.+..+ ++....+..+
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 5799999999999877665432 135899998 77666532 2333332110
Q ss_pred ---------CCeEEEEcCCCCC-C-CC---CCccceEEccccccCc-CC--HHHHHHHHHHhcCCCcEEEEEeccCCCCC
Q 017428 208 ---------DKVSFQVGDALQQ-P-FP---DGQFDLVWSMESGEHM-PD--KSKFVSELARVTAPAGTIIIVTWCHRDLA 270 (371)
Q Consensus 208 ---------~~v~~~~~d~~~~-~-~~---~~~fD~v~~~~~l~~~-~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 270 (371)
-.+.+..+|+.+. + +. ...||+|+.-..-... ++ -..+++.+.++++|||.+....
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------- 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 1233555665442 1 11 3679999875422111 22 1689999999999999876421
Q ss_pred cCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEE
Q 017428 271 PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 317 (371)
....+++.|+++||.+....
T Consensus 220 ---------------------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 ---------------------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ---------------------------CCHHHHHHHHHHTCEEEEEE
T ss_pred ---------------------------CcHHHHHHHHhCCeEEEecc
Confidence 22457788999999877654
No 324
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.15 E-value=0.036 Score=51.55 Aligned_cols=93 Identities=22% Similarity=0.234 Sum_probs=63.0
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-C-CCCCCccceEEccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-PFPDGQFDLVWSME 234 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~~~~fD~v~~~~ 234 (371)
++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++ .|.. .++...-.+ . ... +.+|+|+-.-
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~-~g~Dvvid~~ 265 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAHL-KSFDFILNTV 265 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTTT-TCEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHhh-cCCCEEEECC
Confidence 489999999985 778888888778999999999988888765 2321 122111001 0 111 5699988543
Q ss_pred cccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.-. ..++.+.+.|+|+|.+++...
T Consensus 266 g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 266 AAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp SSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCH------HHHHHHHHHhccCCEEEEecc
Confidence 221 236678899999999887643
No 325
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.13 E-value=0.035 Score=50.35 Aligned_cols=88 Identities=16% Similarity=0.228 Sum_probs=60.5
Q ss_pred CCCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccc
Q 017428 157 KRPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (371)
Q Consensus 157 ~~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 235 (371)
.++.+||=+|+|. |..+..+++..+++|++++ +++..+.+++ .| ......|...+ .+.+|+|+-.-.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~----lG----a~~v~~d~~~v---~~g~Dvv~d~~g 208 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK----RG----VRHLYREPSQV---TQKYFAIFDAVN 208 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH----HT----EEEEESSGGGC---CSCEEEEECC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH----cC----CCEEEcCHHHh---CCCccEEEECCC
Confidence 3589999999964 7888888887799999999 9888888765 23 22222342222 467999885422
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
- ..+..+.++|+|+|.+++..
T Consensus 209 ~-------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 S-------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ------------TTGGGEEEEEEEEEEC
T ss_pred c-------hhHHHHHHHhcCCCEEEEEe
Confidence 1 12356789999999999874
No 326
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.08 E-value=0.12 Score=48.05 Aligned_cols=70 Identities=17% Similarity=0.097 Sum_probs=54.3
Q ss_pred CEEEEECCCcChHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---C-----CCCccceE
Q 017428 160 KNVVDVGCGIGGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---F-----PDGQFDLV 230 (371)
Q Consensus 160 ~~VLDlG~GtG~~~~~l~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~-----~~~~fD~v 230 (371)
.+|+|+-||.|.++..+... |.+ |.++|+++..++..+.++ ++..++.+|+.+.. + ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 68999999999999999887 655 669999999888777653 35778889988763 1 24679999
Q ss_pred Eccccc
Q 017428 231 WSMESG 236 (371)
Q Consensus 231 ~~~~~l 236 (371)
+..--.
T Consensus 76 ~ggpPC 81 (376)
T 3g7u_A 76 IGGPPC 81 (376)
T ss_dssp EECCCC
T ss_pred EecCCC
Confidence 875443
No 327
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.03 E-value=0.13 Score=47.10 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=63.5
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------CCccceE
Q 017428 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP------DGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~G-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~fD~v 230 (371)
++.+||-+|+| .|..+..+++..+++|+++|.++..++.+++ .|.. . ..|..+..+. .+.+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~--~~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---L--VVNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---E--EECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---E--EecCCCccHHHHHHHHhCCCCEE
Confidence 38899999986 3777778887778999999999998887754 3321 1 1243322110 0468988
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+-... . ...++.+.+.|+++|.+++...
T Consensus 235 id~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 235 VVTAV-----S-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----C-HHHHHHHHHHhhcCCEEEEecc
Confidence 75432 1 3467888999999999987653
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.02 E-value=0.13 Score=47.61 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=63.8
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CC-------CCCCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QP-------FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~-------~~~~~ 226 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++ |..+ .. ...+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECL--NPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEE--ecccccchHHHHHHHHhCCC
Confidence 489999999875 7788888887787 89999999988887764 3431 122 2221 11 11247
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCC-cEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 264 (371)
+|+|+-.-. . ...++.+.+.|+++ |.+++...
T Consensus 262 ~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 262 VDYAVECAG-----R-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 999885422 1 35678899999999 99987653
No 329
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.97 E-value=0.12 Score=47.91 Aligned_cols=92 Identities=17% Similarity=0.319 Sum_probs=63.7
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CC-------CCCCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QP-------FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~-------~~~~~ 226 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++ |..+ .. ...+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---DFV--NPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---EEE--CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---eEE--eccccchhHHHHHHHHhCCC
Confidence 488999999875 7788888887787 89999999988887764 3431 122 2221 11 11246
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCC-cEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 264 (371)
+|+|+-.-. . ...++.+.+.|++| |.+++...
T Consensus 263 ~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 263 VDFSLECVG-----N-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 899875422 1 35678899999999 99988653
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.90 E-value=0.12 Score=47.85 Aligned_cols=92 Identities=18% Similarity=0.224 Sum_probs=63.8
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CC-------CCCCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QP-------FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~-------~~~~~ 226 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++ |..+ .. ...+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGAT---ECI--NPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCS---EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---eEe--ccccccccHHHHHHHHhCCC
Confidence 489999999875 7778888887787 89999999998888764 2321 122 2221 01 11247
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCC-cEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 264 (371)
+|+|+-.-. . ...++.+.+.|+++ |.+++...
T Consensus 261 ~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 261 VDYSFECIG-----N-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCC-----c-HHHHHHHHHhhccCCcEEEEEec
Confidence 999875422 1 35678899999999 99988653
No 331
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.88 E-value=0.089 Score=49.64 Aligned_cols=63 Identities=19% Similarity=0.209 Sum_probs=50.1
Q ss_pred CCCCEEEEECCCcChHHHHHH-HHcC--CEEEEEeCCHHHHHHHHHHHHH--c-CCCCCeEEEEcCCCC
Q 017428 157 KRPKNVVDVGCGIGGSSRYLA-KKFG--AKCQGITLSPVQAQRANALAAA--R-GLADKVSFQVGDALQ 219 (371)
Q Consensus 157 ~~~~~VLDlG~GtG~~~~~l~-~~~~--~~v~gvD~s~~~~~~a~~~~~~--~-~~~~~v~~~~~d~~~ 219 (371)
.++..|+|||++.|..+..++ +..+ .+|+++|++|...+..+++++. + +.++++.++..-+-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 458999999999999999988 4443 6999999999999999999987 3 232577777655543
No 332
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.85 E-value=0.22 Score=46.77 Aligned_cols=94 Identities=22% Similarity=0.150 Sum_probs=62.4
Q ss_pred CCCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCc
Q 017428 157 KRPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQ 226 (371)
Q Consensus 157 ~~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~ 226 (371)
.++.+||=+|+|. |..+..+++..++ +|+++|.++..++.+++. |. -.++ |..+.. .....
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GA---DHVI--DPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TC---SEEE--CTTTSCHHHHHHHHTTTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CC---CEEE--cCCCCCHHHHHHHHhCCCC
Confidence 3589999999875 7788888887788 999999999988888653 32 1122 222211 12236
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhc----CCCcEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVT----APAGTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~L----kpgG~l~i~~~ 264 (371)
+|+|+-.- ......+..+.+.| ++||.+++...
T Consensus 283 ~D~vid~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 283 AKLFLEAT-----GVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CSEEEECS-----SCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCEEEECC-----CCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 99887432 23333445555555 99999998754
No 333
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.80 E-value=0.17 Score=46.93 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=63.5
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CC-------CCCCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QP-------FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~-------~~~~~ 226 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++ .|.. .++ |..+ .. ...+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---ECV--NPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---eEe--cccccchhHHHHHHHHhCCC
Confidence 489999999875 7778888887787 89999999988887764 3431 122 2221 10 11247
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCC-cEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 264 (371)
+|+|+-.-. . ...++.+.+.|+++ |.+++...
T Consensus 262 ~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 262 VDFSFEVIG-----R-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred CcEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEecc
Confidence 999875422 1 35678899999999 99987653
No 334
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.75 E-value=0.095 Score=47.97 Aligned_cols=91 Identities=20% Similarity=0.214 Sum_probs=61.7
Q ss_pred CCCEEEEECCC--cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGCG--IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~G--tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||-+|+| .|..+..+++..|++|+++|.++..++.+++. |. .. .+ |..+.. .....+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga--~~-~~--~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GA--AY-VI--DTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TC--SE-EE--ETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CC--cE-EE--eCCcccHHHHHHHHhCCCCC
Confidence 48999999987 57788888887799999999999888877652 32 11 22 222211 123479
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+-+-.- .. +.+..+.|++||.+++...
T Consensus 215 Dvvid~~g~------~~-~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 215 DAAIDSIGG------PD-GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEESSCH------HH-HHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCC------hh-HHHHHHHhcCCCEEEEEee
Confidence 998864321 12 2345589999999998754
No 335
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.74 E-value=0.023 Score=52.39 Aligned_cols=70 Identities=16% Similarity=0.201 Sum_probs=53.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFG---AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~~ 232 (371)
..+|+|+-||.|.+...+... | ..|.++|+++..++..+.++ ++..++.+|+.+.. ++...+|+|+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNF------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CCeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhc------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 468999999999999999886 4 36899999999998888765 24457788988763 12226899987
Q ss_pred ccc
Q 017428 233 MES 235 (371)
Q Consensus 233 ~~~ 235 (371)
.--
T Consensus 75 gpP 77 (343)
T 1g55_A 75 SPP 77 (343)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 336
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.73 E-value=0.22 Score=46.35 Aligned_cols=52 Identities=15% Similarity=0.306 Sum_probs=38.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc--------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF--------GAKCQGITLSPVQAQRANALAAARGLADKVSFQ 213 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 213 (371)
+..|+|+|.|+|.++..+.+.+ ..+|+.||+|+...+.-++++... .++.+.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~ 140 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWH 140 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEe
Confidence 5689999999999999887643 248999999998887666655332 146554
No 337
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.72 E-value=0.077 Score=49.40 Aligned_cols=92 Identities=24% Similarity=0.315 Sum_probs=64.4
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CCC-------CCCCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL--QQP-------FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~-------~~~~~ 226 (371)
++.+||=+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++ |.. +.. ...+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFV--NPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEE--ccccCchhHHHHHHHhcCCC
Confidence 488999999874 7788888887787 89999999988887764 3431 122 222 111 12347
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCC-cEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 264 (371)
+|+|+-.-. . ...++.+.+.|++| |.+++...
T Consensus 264 ~D~vid~~g-----~-~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 264 VDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHhhccCCEEEEEcc
Confidence 999885422 2 35688899999997 99988754
No 338
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.72 E-value=0.15 Score=47.26 Aligned_cols=92 Identities=18% Similarity=0.210 Sum_probs=63.6
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CC-------CCCCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QP-------FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~-------~~~~~ 226 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++ .|.. .++ |..+ .. ...+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---DCL--NPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEE--CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---EEE--ccccccchHHHHHHHHhCCC
Confidence 489999999874 7788888887787 89999999988887764 3431 112 2221 11 11246
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCC-cEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 264 (371)
+|+|+-.-. . ...++.+.+.|++| |.+++...
T Consensus 266 ~Dvvid~~G-----~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 266 VDYSLDCAG-----T-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp BSEEEESSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ccEEEECCC-----C-HHHHHHHHHHhhcCCCEEEEECC
Confidence 999875422 1 35678899999999 99987653
No 339
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.69 E-value=0.068 Score=48.63 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=45.7
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHHcC
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSP---VQAQRANALAAARG 205 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~---~~~~~a~~~~~~~~ 205 (371)
.+++.++.... . ++..|||.-||+|..+....+. +.+++|+|+++ ..++.+++++...+
T Consensus 230 ~l~~~~i~~~~-~-----~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALS-H-----PGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHS-C-----TTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhC-C-----CCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 35566665543 2 4889999999999999888776 88999999999 99999999876543
No 340
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.68 E-value=0.073 Score=48.61 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=63.3
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------CCCCccc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~fD 228 (371)
++.+||-+|+ |.|..+..+++..+++|++++.+++.++.+.+. .|. . ..+ |..+.. ...+.+|
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~--~-~~~--~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGF--D-GAI--DYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCC--S-EEE--ETTTSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC--C-EEE--ECCCHHHHHHHHHhcCCCce
Confidence 4899999998 457788888887789999999999887776322 232 1 112 222211 1135699
Q ss_pred eEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 229 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+-+-. ...+..+.+.|++||.+++...
T Consensus 221 ~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 221 VFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 8876432 1468889999999999998653
No 341
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.60 E-value=0.048 Score=49.76 Aligned_cols=58 Identities=14% Similarity=0.084 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 017428 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG 205 (371)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 205 (371)
+++.++.... . ++..|||.-||+|..+....+. +.+++|+|+++...+.+++++...+
T Consensus 241 l~~~~i~~~~-~-----~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 241 LPEFFIRMLT-E-----PDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HHHHHHHHHC-C-----TTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred HHHHHHHHhC-C-----CCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 5555555443 2 4889999999999999887765 8999999999999999998875544
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.60 E-value=0.85 Score=35.56 Aligned_cols=89 Identities=18% Similarity=0.127 Sum_probs=57.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v~ 231 (371)
..+|+=+|+| .++..+++.+ +..|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 4679999885 4444444443 7899999999998877654 24678899987642 1224678877
Q ss_pred ccccccCcCCH--HHHHHHHHHhcCCCcEEEEE
Q 017428 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~ 262 (371)
+.. ++. ...+-...+.+.|+..++..
T Consensus 77 ~~~-----~~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 77 LTI-----PNGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred EEC-----CChHHHHHHHHHHHHHCCCCeEEEE
Confidence 542 332 22233455667788876654
No 343
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.55 E-value=0.13 Score=47.18 Aligned_cols=92 Identities=23% Similarity=0.325 Sum_probs=63.8
Q ss_pred CCCEEEEECCC--cChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------CCC-Cc
Q 017428 158 RPKNVVDVGCG--IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPD-GQ 226 (371)
Q Consensus 158 ~~~~VLDlG~G--tG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~-~~ 226 (371)
++.+||-+|+| .|..+..+++.. +++|+++|.++..++.+++. |. .. ++ |..+.. ... +.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~--~~-~~--~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GA--DY-VI--NASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TC--SE-EE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CC--CE-Ee--cCCCccHHHHHHHHhcCCC
Confidence 48999999987 566777888887 89999999999888877542 32 11 22 222211 112 47
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+|+.+..- ...++.+.+.|+|+|.+++...
T Consensus 241 ~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 241 VDAVIDLNNS------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEEEESCCC------HHHHTTGGGGEEEEEEEEECCS
T ss_pred ceEEEECCCC------HHHHHHHHHHHhcCCEEEEECC
Confidence 9998855321 3467888999999999988653
No 344
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.51 E-value=0.08 Score=48.64 Aligned_cols=92 Identities=22% Similarity=0.223 Sum_probs=62.5
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC-------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP-------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~~f 227 (371)
++.+||-+|+ |.|..+..+++..+++|+++|.++...+.+++ .+. .. . .|..+ .. ...+.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~--~~-~--~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGG--EV-F--IDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTC--CE-E--EETTTCSCHHHHHHHHHTSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCC--ce-E--EecCccHhHHHHHHHHhCCCC
Confidence 4899999998 45777777777668999999999887776654 332 11 1 24331 11 011268
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+.+.. ....++.+.+.|+++|++++...
T Consensus 240 D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 240 HGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred CEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 98886532 13568889999999999988653
No 345
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.41 E-value=0.021 Score=52.53 Aligned_cols=91 Identities=16% Similarity=0.141 Sum_probs=64.2
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-C----CCC-CCccce
Q 017428 159 PKNVVDVGCGI-GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q----PFP-DGQFDL 229 (371)
Q Consensus 159 ~~~VLDlG~Gt-G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~----~~~-~~~fD~ 229 (371)
+.+||-+|+|. |..+..+++.. +++|+++|.+++.++.+++ .|.. .++ |..+ . .+. ...+|+
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~g~g~D~ 241 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD---YVS--EMKDAESLINKLTDGLGASI 241 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS---EEE--CHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC---EEe--ccccchHHHHHhhcCCCccE
Confidence 88999999975 77888999988 9999999999998888765 2321 111 2111 0 011 236999
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+-.-. . ...++.+.+.|+|||.+++...
T Consensus 242 vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 242 AIDLVG-----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCC-----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 885432 1 3467889999999999988653
No 346
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.39 E-value=0.13 Score=47.31 Aligned_cols=92 Identities=18% Similarity=0.181 Sum_probs=63.5
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++ .|. -.++ |..+.. .....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga---~~~~--~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGA---DYVI--NPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTC---SEEE--CTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCC---CEEE--CCCCcCHHHHHHHHcCCCCC
Confidence 488999999864 7777888887788 89999999988887764 232 1122 322211 112369
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+-.-. . ...++.+.+.|+++|.++....
T Consensus 238 D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 238 DVFLEFSG-----A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 99885432 1 3567888999999999888653
No 347
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.38 E-value=0.13 Score=46.67 Aligned_cols=94 Identities=19% Similarity=0.124 Sum_probs=63.9
Q ss_pred CCCEEEEEC-C-CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCccce
Q 017428 158 RPKNVVDVG-C-GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG-~-GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (371)
++.+||-+| + |.|..+..+++..+++|++++.+++.++.+++ .|. -..+..+-.+.. .....+|+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga---~~~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LGA---WETIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC---SEEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---CEEEeCCCccHHHHHHHHhCCCCceE
Confidence 489999998 3 45778888888779999999999998888765 232 122221111110 12346999
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
|+-+-.- ..+..+.+.|++||.+++....
T Consensus 213 vid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 213 VYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp EEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred EEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 8865332 3567888999999999987643
No 348
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.37 E-value=0.13 Score=47.01 Aligned_cols=92 Identities=14% Similarity=0.097 Sum_probs=62.8
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~~~f 227 (371)
++.+||-+|+ |.|..+..+++..+++|++++.++..++.+++. .|. .. .+ |..+. . ...+.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~--~~-~~--d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGF--DD-AF--NYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCC--SE-EE--ETTSCSCSHHHHHHHCTTCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC--ce-EE--ecCCHHHHHHHHHHHhCCCC
Confidence 4899999997 457777778777789999999999887776532 232 11 12 33221 1 112468
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+.+.. . ..++.+.+.|++||.+++...
T Consensus 227 d~vi~~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 227 DIYFENVG-----G--KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEEESSC-----H--HHHHHHHTTEEEEEEEEECCC
T ss_pred cEEEECCC-----H--HHHHHHHHHHhcCCEEEEEcc
Confidence 98876532 1 368889999999999988643
No 349
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.31 E-value=0.093 Score=48.13 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=63.0
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCccce
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (371)
++.+||-+|+ |.|..+..+++..|++|++++.+++..+.+++. |. -.++..+ .+.. .....+|+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GA---DIVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TC---SEEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC---cEEecCc-hhHHHHHHHHhCCCCceE
Confidence 4899999997 457788888887799999999999888777652 32 1223222 2211 12336999
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+-+-.- ..+..+.+.|++||.+++...
T Consensus 231 vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 231 VVDPIGG-------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEESCC---------CHHHHHHTEEEEEEEEEC--
T ss_pred EEECCch-------hHHHHHHHhhcCCCEEEEEEc
Confidence 9865432 246788899999999998653
No 350
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.27 E-value=0.097 Score=47.76 Aligned_cols=93 Identities=12% Similarity=0.018 Sum_probs=63.3
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCccce
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (371)
++.+||-+|+ |.|..+..+++..+++|++++.++..++.+++ .|. -.++..+-.+.. .....+|+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga---~~~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGA---EYLINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---cEEEeCCCchHHHHHHHHhCCCCceE
Confidence 4899999994 45777888888779999999999988887765 332 122222111110 12346999
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+-+-.- ..++.+.+.|++||.+++...
T Consensus 221 vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 221 SFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 8865432 357788899999999998753
No 351
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.23 E-value=0.21 Score=46.17 Aligned_cols=93 Identities=16% Similarity=0.106 Sum_probs=63.7
Q ss_pred CCCEEEEEC--CCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCccceE
Q 017428 158 RPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FPDGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG--~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~v 230 (371)
++.+||-+| .|.|..+..+++..+++|++++.+++.++.+++ .|. . .++..+-.+.. ...+.+|+|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga--~-~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGC--D-RPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--S-EEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCC--c-EEEecCChhHHHHHHHhcCCCCCEE
Confidence 489999999 356788888888778999999999988877765 332 1 12221111110 112468998
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+-+-. . ..++.+.+.|+++|.+++...
T Consensus 236 id~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 236 YESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 86532 1 467889999999999888653
No 352
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.14 E-value=0.1 Score=47.90 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=65.4
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-CCCccce
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-PDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~~~fD~ 229 (371)
++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++ .|.. .++..+- +.. . ....+|+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~-~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD---AAVKSGA-GAADAIRELTGGQGATA 242 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS---EEEECST-THHHHHHHHHGGGCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCCC-cHHHHHHHHhCCCCCeE
Confidence 489999999876 88888898887 7899999999998888765 3431 2222111 110 1 1236898
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+-.-. . ...++.+.+.|++||.+++...
T Consensus 243 v~d~~G-----~-~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 243 VFDFVG-----A-QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEESSC-----C-HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEECCC-----C-HHHHHHHHHHHhcCCEEEEECC
Confidence 875322 1 3478899999999999998754
No 353
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.09 E-value=0.069 Score=48.04 Aligned_cols=97 Identities=19% Similarity=0.285 Sum_probs=57.8
Q ss_pred CCeEEEEcCCCCC--CCCCCccceEEccccccCcC--------------------CHHHHHHHHHHhcCCCcEEEEEecc
Q 017428 208 DKVSFQVGDALQQ--PFPDGQFDLVWSMESGEHMP--------------------DKSKFVSELARVTAPAGTIIIVTWC 265 (371)
Q Consensus 208 ~~v~~~~~d~~~~--~~~~~~fD~v~~~~~l~~~~--------------------~~~~~l~~~~~~LkpgG~l~i~~~~ 265 (371)
.++.++++|..+. .+++++||+|++.--..... ....+++++.++|||||.+++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 3578999998762 25678999999864332111 1245788999999999999886421
Q ss_pred CCCCCcCccccChHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 266 HRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
.. ... . . . ..... +.-...+..+++++||.......|..
T Consensus 100 ~~--~~~----~----~-~---g~~~~---~~~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 100 VA--VAR----R----R-F---GRHLV---FPLHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp EE--EEC----C------------EEE---ECHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred Cc--ccc----c----c-C---Ccccc---cccHHHHHHHHHHcCCeeeccEEEeC
Confidence 00 000 0 0 0 00000 01134677888999998777666643
No 354
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.06 E-value=0.21 Score=45.65 Aligned_cols=91 Identities=21% Similarity=0.199 Sum_probs=63.7
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||-+|+ |.|..+..+++..+++|+++|.++..++.+++ .|. . .++ |..+.. .....+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga--~-~~~--d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGA--D-ETV--NYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC--S-EEE--ETTSTTHHHHHHHHTTTTCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--C-EEE--cCCcccHHHHHHHHhCCCCc
Confidence 4899999998 56778888888778999999999998887764 232 1 122 332211 112469
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+.... . ..++.+.+.|+++|.+++...
T Consensus 237 d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 237 DKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred eEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 99986544 2 246788899999999887653
No 355
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.04 E-value=0.095 Score=48.37 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=61.0
Q ss_pred CEEEEECCCc-ChHH-HHHH-HHcCCE-EEEEeCCHH---HHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-----CCcc
Q 017428 160 KNVVDVGCGI-GGSS-RYLA-KKFGAK-CQGITLSPV---QAQRANALAAARGLADKVSFQVGDALQQPFP-----DGQF 227 (371)
Q Consensus 160 ~~VLDlG~Gt-G~~~-~~l~-~~~~~~-v~gvD~s~~---~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~f 227 (371)
.+||-+|+|. |..+ ..++ +..+++ |+++|.+++ ..+.+++ .| ...+ |..+..+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lG----a~~v--~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LD----ATYV--DSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TT----CEEE--ETTTSCGGGHHHHSCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cC----Cccc--CCCccCHHHHHHhCCCC
Confidence 8999999864 7777 8888 766876 999999987 7777654 33 2322 33322111 1368
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+-.-. . ...++.+.+.|++||.+++...
T Consensus 244 Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 244 DFIYEATG-----F-PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC-----C-hHHHHHHHHHHhcCCEEEEEeC
Confidence 98874322 2 2467889999999999988653
No 356
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.04 E-value=0.22 Score=45.67 Aligned_cols=90 Identities=13% Similarity=0.241 Sum_probs=62.0
Q ss_pred CCCEEEEEC-CC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC------CCCCCccce
Q 017428 158 RPKNVVDVG-CG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ------PFPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG-~G-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~fD~ 229 (371)
++.+||=+| +| .|..+..+++..|++|++++.+++.++.+++ .|.. .++ |..+. ......+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGAD---IVL--NHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCS---EEE--CTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCc---EEE--ECCccHHHHHHHhCCCCccE
Confidence 488999994 44 4778888888779999999999998888776 2321 112 22221 012346998
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
|+-.. .....++.+.++|+++|.++..
T Consensus 221 v~d~~------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTF------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEESS------CHHHHHHHHHHHEEEEEEEEES
T ss_pred EEECC------CchHHHHHHHHHhccCCEEEEE
Confidence 88542 2345678899999999999764
No 357
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.93 E-value=0.31 Score=45.00 Aligned_cols=90 Identities=19% Similarity=0.305 Sum_probs=63.7
Q ss_pred CCCEEEEEC-CC-cChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC------CCCCCccc
Q 017428 158 RPKNVVDVG-CG-IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ------PFPDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG-~G-tG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~fD 228 (371)
++.+||=+| +| .|..+..+++.. +++|+++|.+++.++.+++ .|.. .++ |..+. ....+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi--~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVI--DHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEE--CTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEE--eCCCCHHHHHHHhcCCCce
Confidence 478999998 55 488899999875 8899999999988888765 3421 112 22221 12235799
Q ss_pred eEEccccccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 229 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
+|+-.- .-...++.+.++|+|+|.+++.
T Consensus 242 vvid~~------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTT------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECS------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECC------CchhhHHHHHHHhcCCCEEEEE
Confidence 887532 2345788999999999999986
No 358
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.59 E-value=0.24 Score=45.59 Aligned_cols=90 Identities=17% Similarity=0.232 Sum_probs=61.5
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||-.|+ |.|..+..+++..+++|++++.+++.++.+++ .|. . ..+ |..+.. .....+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--~-~~~--d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGA--H-EVF--NHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--S-EEE--ETTSTTHHHHHHHHHCTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCC--C-EEE--eCCCchHHHHHHHHcCCCCc
Confidence 4889999996 45677777777778999999999988876654 332 1 122 322211 112369
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|+|+.+.. ...+..+.++|+++|.+++..
T Consensus 241 D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 99876532 135778899999999998865
No 359
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.45 E-value=0.033 Score=51.61 Aligned_cols=95 Identities=20% Similarity=0.195 Sum_probs=62.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CC--CCCCCccceEEcc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL-QQ--PFPDGQFDLVWSM 233 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~--~~~~~~fD~v~~~ 233 (371)
++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++ .|.. .++..+-. +. ... +.+|+|+-.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~-~~~D~vid~ 250 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKYF-DTFDLIVVC 250 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHSC-SCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHhh-cCCCEEEEC
Confidence 489999999864 777888888778999999999988887765 2321 12221111 11 111 479999865
Q ss_pred ccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 234 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-.-.. ...++.+.+.|++||.+++...
T Consensus 251 ~g~~~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 251 ASSLT----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CSCST----TCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCCc----HHHHHHHHHHhcCCCEEEEecC
Confidence 43200 1234567889999999987653
No 360
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.40 E-value=0.21 Score=45.27 Aligned_cols=91 Identities=15% Similarity=0.085 Sum_probs=62.0
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||-.|+ |.|..+..+++..+++|+++|.+++.++.+++ .+. .. .+ |..+.. .....+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~--~~-~~--~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGA--WQ-VI--NYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC--SE-EE--ETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC--CE-EE--ECCCccHHHHHHHHhCCCCc
Confidence 4889999993 45667777777668999999999988877765 232 11 22 322211 112469
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+.+.. ...++.+.+.|++||.+++...
T Consensus 211 D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 211 RVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 99886543 2457888999999999988653
No 361
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.39 E-value=0.18 Score=46.85 Aligned_cols=94 Identities=18% Similarity=0.107 Sum_probs=63.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC---CCC-----C-CCCCc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA---LQQ-----P-FPDGQ 226 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-----~-~~~~~ 226 (371)
++.+||-+|+|. |..+..+++..+ ++|++++.+++.++.+++ .|. -.++..+. .+. . .....
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa---~~vi~~~~~~~~~~~~~v~~~~~g~g 267 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGA---DLTLNRRETSVEERRKAIMDITHGRG 267 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCC---cEEEeccccCcchHHHHHHHHhCCCC
Confidence 489999999764 778888888778 599999999998887764 342 12222210 010 0 11236
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+|+-.-.- ...++.+.+.|+++|.+++...
T Consensus 268 ~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 268 ADFILEATGD------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp EEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CcEEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 9998854321 1357788899999999988653
No 362
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.30 E-value=0.25 Score=45.66 Aligned_cols=88 Identities=14% Similarity=0.197 Sum_probs=59.8
Q ss_pred CCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------CCccc
Q 017428 159 PKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSP---VQAQRANALAAARGLADKVSFQVGDALQQPFP------DGQFD 228 (371)
Q Consensus 159 ~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~fD 228 (371)
+.+||-+|+|. |..+..+++..|++|+++|.++ +..+.+++ .| ...+ | .+ .+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~----~g----a~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE----TK----TNYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH----HT----CEEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH----hC----Ccee--c-hH-HHHHHHHHhCCCCC
Confidence 78999999853 5666777776688999999998 77776654 23 2222 3 22 211 14689
Q ss_pred eEEccccccCcCCHHHHH-HHHHHhcCCCcEEEEEec
Q 017428 229 LVWSMESGEHMPDKSKFV-SELARVTAPAGTIIIVTW 264 (371)
Q Consensus 229 ~v~~~~~l~~~~~~~~~l-~~~~~~LkpgG~l~i~~~ 264 (371)
+|+..-... ..+ +.+.+.|+++|.+++...
T Consensus 249 ~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 249 VIIDATGAD------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEEECCCCC------THHHHHHGGGEEEEEEEEECSC
T ss_pred EEEECCCCh------HHHHHHHHHHHhcCCEEEEEec
Confidence 988654321 245 888999999999888653
No 363
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.23 E-value=0.21 Score=45.94 Aligned_cols=91 Identities=19% Similarity=0.228 Sum_probs=62.7
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------CCCCccc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~fD 228 (371)
++.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++ .|. -..+ |..+.. ...+.+|
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa---~~~~--~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGA---KRGI--NYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC---SEEE--ETTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCC---CEEE--eCCchHHHHHHHHHhCCCce
Confidence 4899999953 35777888888779999999999998888765 232 1122 222211 1135699
Q ss_pred eEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 229 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+-+-.- ..+..+.+.|+++|.+++...
T Consensus 238 vvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 238 IILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 98865432 256788899999999988653
No 364
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.14 E-value=0.25 Score=45.02 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=51.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcC---CEE-EEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFG---AKC-QGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~---~~v-~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~ 231 (371)
..+|+|+-||.|.+...+.+. | ..| .++|+++...+..+.++. .. ++..|+.++. ++...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~------~~-~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFK------EE-VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHC------CC-CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCC------CC-cccCChhhcCHHHhccCCCCEEE
Confidence 578999999999999998775 4 346 699999999888877752 22 5678888764 2223689998
Q ss_pred cccc
Q 017428 232 SMES 235 (371)
Q Consensus 232 ~~~~ 235 (371)
...-
T Consensus 82 ggpP 85 (327)
T 3qv2_A 82 MSPP 85 (327)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 6543
No 365
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.13 E-value=0.093 Score=47.60 Aligned_cols=91 Identities=14% Similarity=0.190 Sum_probs=62.3
Q ss_pred EEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccceEEcccccc
Q 017428 161 NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMESGE 237 (371)
Q Consensus 161 ~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v~~~~~l~ 237 (371)
+||=+|+ |.|..+..+++..|++|++++.+++..+.+++ .|.. ..+-..+.... ....+.+|+|+-.-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~~~~~~~d~v~d~~--- 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS----LGAN--RILSRDEFAESRPLEKQLWAGAIDTV--- 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HTCS--EEEEGGGSSCCCSSCCCCEEEEEESS---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC--EEEecCCHHHHHhhcCCCccEEEECC---
Confidence 4999986 45888999998889999999999998888865 3321 11211111111 12345789876432
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.. ..++.+.+.|+|+|.+++...
T Consensus 220 --g~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 --GD--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred --Cc--HHHHHHHHHHhcCCEEEEEec
Confidence 22 378899999999999998753
No 366
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.12 E-value=0.26 Score=45.28 Aligned_cols=91 Identities=16% Similarity=0.110 Sum_probs=61.4
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||-.|+ |.|..+..+++..+++|+++|.+++.++.+++. |. .. .+ |..+.. .....+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~--~~-~~--~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GA--AA-GF--NYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TC--SE-EE--ETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC--cE-EE--ecCChHHHHHHHHHhcCCCc
Confidence 4889999984 456677777776689999999999888877442 32 11 12 222211 122469
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+.+..- ..+..+.+.|++||.+++...
T Consensus 233 d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 233 NLILDCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEEESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred eEEEECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 998865432 146778899999999988653
No 367
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.88 E-value=0.37 Score=44.26 Aligned_cols=91 Identities=12% Similarity=0.110 Sum_probs=61.3
Q ss_pred C--CEEEEECC--CcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------CCCCc
Q 017428 159 P--KNVVDVGC--GIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDGQ 226 (371)
Q Consensus 159 ~--~~VLDlG~--GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~ 226 (371)
+ .+||-.|+ |.|..+..+++..|+ +|+++|.+++.++.+++. .|. .. . .|..+.. ...+.
T Consensus 159 g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~--~~-~--~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 159 GSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF--DA-A--INYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp TSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC--SE-E--EETTTSCHHHHHHHHCTTC
T ss_pred CCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC--ce-E--EecCchHHHHHHHHhcCCC
Confidence 7 89999997 446667777776688 999999998777766542 232 11 1 2332211 11236
Q ss_pred cceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+|+.+-. ...++.+.++|++||.+++...
T Consensus 231 ~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 231 VDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 898886543 2568889999999999988653
No 368
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.64 E-value=0.23 Score=45.38 Aligned_cols=91 Identities=14% Similarity=0.041 Sum_probs=59.3
Q ss_pred CCCEEEEECCCcC-hHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGCGIG-GSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~GtG-~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||=+|+|.+ ..+..+++.. +++|+++|.+++-++.+++ .|.. .++ |..+.. .....+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~---~~i--~~~~~~~~~~v~~~t~g~g~ 233 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGAD---VTI--NSGDVNPVDEIKKITGGLGV 233 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCS---EEE--EC-CCCHHHHHHHHTTSSCE
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCe---EEE--eCCCCCHHHHhhhhcCCCCc
Confidence 4899999999864 4566666655 7899999999988777665 3321 122 222211 112346
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|.++.... -...+....+.|+++|.+++..
T Consensus 234 d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 234 QSAIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred eEEEEecc------CcchhheeheeecCCceEEEEe
Confidence 66654321 2456788899999999998865
No 369
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.59 E-value=1.9 Score=37.69 Aligned_cols=93 Identities=13% Similarity=0.110 Sum_probs=61.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEcccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 235 (371)
.++||=.| + |.++..+++.+ +.+|++++-++........ .+++++.+|+.++. -..+|+|+....
T Consensus 5 ~~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 5 TGTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CCEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred cCcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCC
Confidence 36899999 4 88888888776 7899999998865443322 36899999998865 467899987665
Q ss_pred ccCcCCH--HHHHHHHHHhcCCCcEEEEEe
Q 017428 236 GEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 236 l~~~~~~--~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.....+. ..+++.+.+.-..-+.+++..
T Consensus 73 ~~~~~~~~~~~l~~a~~~~~~~~~~~v~~S 102 (286)
T 3ius_A 73 PDSGGDPVLAALGDQIAARAAQFRWVGYLS 102 (286)
T ss_dssp CBTTBCHHHHHHHHHHHHTGGGCSEEEEEE
T ss_pred ccccccHHHHHHHHHHHhhcCCceEEEEee
Confidence 5443333 334443333212224555543
No 370
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.53 E-value=0.41 Score=43.50 Aligned_cols=91 Identities=16% Similarity=0.121 Sum_probs=62.2
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCcc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (371)
++.+||-.|+ |.|..+..++...+++|+++|.+++.++.+++ .+. .. .+ |..+.. .....+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~--~~-~~--d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGC--HH-TI--NYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC--SE-EE--ETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--CE-EE--ECCCHHHHHHHHHHhCCCCC
Confidence 4889999995 56777777777778999999999988877754 232 11 12 332211 112469
Q ss_pred ceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 228 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+|+.+..- ..++.+.+.|++||.+++...
T Consensus 216 d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 216 DVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 998865431 347788899999999888653
No 371
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.44 E-value=0.095 Score=48.04 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=61.8
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-------CCCccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-------PDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~fD 228 (371)
++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++. . . .+ .|..+..+ ....+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v--~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RL--VNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EE--ECTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hc--cCcCccCHHHHHHHhcCCCCC
Confidence 488999999864 7778888887788 899999999887766542 1 1 11 23222111 124689
Q ss_pred eEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 229 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+-.-. . ...++.+.+.|+++|.+++...
T Consensus 234 ~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 234 VLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 9875432 1 3467889999999999887653
No 372
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=92.41 E-value=0.33 Score=44.22 Aligned_cols=66 Identities=17% Similarity=0.076 Sum_probs=49.2
Q ss_pred CCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~ 233 (371)
+.+|+|+.||.|.+...+... |. .|.++|+++..++..+.++.. .. .+|+.++.. .-..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~------~~--~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGE------KP--EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSC------CC--BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCC------CC--cCCHHHcCHhhCCCCCEEEEC
Confidence 579999999999999998876 55 477899999999888877622 11 577776531 11358999874
No 373
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.36 E-value=0.16 Score=46.87 Aligned_cols=95 Identities=16% Similarity=0.103 Sum_probs=59.8
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v~~~~~ 235 (371)
++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ ..|.. .+ +...+.... .. .+.+|+|+-.-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~-~v-i~~~~~~~~~~~-~~g~D~vid~~g 253 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD-DY-VIGSDQAKMSEL-ADSLDYVIDTVP 253 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS-CE-EETTCHHHHHHS-TTTEEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc-ee-eccccHHHHHHh-cCCCCEEEECCC
Confidence 488999999864 667778888778999999999877766552 23321 11 111110000 01 146899875432
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-. ..++.+.+.|+|||.+++...
T Consensus 254 ~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 254 VH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp SC------CCSHHHHTTEEEEEEEEECSC
T ss_pred Ch------HHHHHHHHHhccCCEEEEeCC
Confidence 21 124567789999999988653
No 374
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.29 E-value=0.6 Score=44.54 Aligned_cols=94 Identities=23% Similarity=0.213 Sum_probs=63.7
Q ss_pred CCCCEEEEECC-C-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------------
Q 017428 157 KRPKNVVDVGC-G-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------------- 221 (371)
Q Consensus 157 ~~~~~VLDlG~-G-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------- 221 (371)
.++.+||=+|+ | .|..+..+++..|+++++++.++..++.+++ .|.. .++...-.+..
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~d~~~~~~~~~~~~~~~ 299 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA----MGAE---AIIDRNAEGYRFWKDENTQDPKEW 299 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCC---EEEETTTTTCCSEEETTEECHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh----hCCc---EEEecCcCcccccccccccchHHH
Confidence 35899999997 3 5778888888779999999999988888765 3331 12211111110
Q ss_pred ----------CCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 222 ----------FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 222 ----------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.....+|+|+-.-. . ..+..+.++|++||.+++.-.
T Consensus 300 ~~~~~~i~~~t~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 300 KRFGKRIRELTGGEDIDIVFEHPG-----R--ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHHHTSCCEEEEEECSC-----H--HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHHHhCCCCCcEEEEcCC-----c--hhHHHHHHHhhCCcEEEEEec
Confidence 11247898875322 1 467888999999999998643
No 375
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.20 E-value=1.1 Score=40.62 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=61.4
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCccce
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (371)
++.+||=.|+|. |..+..+++..++ .++++|.++..++.+++ .|. ...+...-.+.. .....+|+
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa---~~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGA---MQTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCC---eEEEeCCCCCHHHHHHhhcccCCccc
Confidence 489999999875 5567777777765 57899999998887765 343 222222111110 11245777
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+-.-. ....++.+.++|++||.+++...
T Consensus 233 v~d~~G------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 233 ILETAG------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EEECSC------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred cccccc------ccchhhhhhheecCCeEEEEEec
Confidence 764321 24567888999999999998653
No 376
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.14 E-value=2.5 Score=36.96 Aligned_cols=78 Identities=15% Similarity=0.162 Sum_probs=54.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.| |+|.++..+++.+ |++|++++.++..++...+.+...+.+.++.++.+|+.+.. +. .+
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56788777 4566666666655 78999999998877776666666555456888999987742 10 13
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
.+|+|+.+....
T Consensus 111 ~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 111 GVDICINNAGLA 122 (279)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988765543
No 377
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.05 E-value=0.38 Score=43.99 Aligned_cols=89 Identities=15% Similarity=0.135 Sum_probs=61.4
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCccce
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (371)
++.+||-+|+ |.|..+..+++..+++|+++ .++..++.+++ .|. ..+. +-.+.. .....+|+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~----lGa----~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD----LGA----TPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH----HTS----EEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH----cCC----CEec-cCCCHHHHHHHHhcCCCceE
Confidence 4899999994 35778888888779999999 88888777655 332 2222 222211 12346998
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|+-+-. . ..+..+.+.|+++|.+++..
T Consensus 220 vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 220 VYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred EEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 875432 1 46788889999999998864
No 378
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=91.89 E-value=0.74 Score=43.37 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=37.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHH
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF------GAKCQGITLSPVQAQRANALAAA 203 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~------~~~v~gvD~s~~~~~~a~~~~~~ 203 (371)
+.+|+|+|.|+|.++..+.+.+ ..+|+.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4689999999999999887654 24799999999988877777764
No 379
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.88 E-value=3.4 Score=41.60 Aligned_cols=158 Identities=13% Similarity=0.050 Sum_probs=91.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---------CCEEEEEeCCHHHHHHHHHHHHHcC--------------CC--------
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---------GAKCQGITLSPVQAQRANALAAARG--------------LA-------- 207 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~--------------~~-------- 207 (371)
...|+-||||.=.....+.... +..++=||. |+.++.=++.+...+ .+
T Consensus 108 ~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 108 KIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp EEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 5789999999988888886541 235556666 444444344443211 11
Q ss_pred -CCeEEEEcCCCCCC----------C-CCCccceEEccccccCcCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCcCc
Q 017428 208 -DKVSFQVGDALQQP----------F-PDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSE 273 (371)
Q Consensus 208 -~~v~~~~~d~~~~~----------~-~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~ 273 (371)
++..++..|+.+.. + ..+..-++++=.++.+++. ..++|+.+.+ + |+|.+++.+...+... .
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~--~ 262 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGP--F 262 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCT--T
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCC--C
Confidence 37889999998741 1 2233345666677788853 4678888875 4 6788877775433211 1
Q ss_pred cccChHHHHHHHHHhhcc-CCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 017428 274 ESLQPWEQELLKKICDAY-YLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (371)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 321 (371)
..+.......+......+ ....+.+.++..+.|.++||..+...++..
T Consensus 263 d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~~ 311 (695)
T 2zwa_A 263 EPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMFQ 311 (695)
T ss_dssp SHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHHH
T ss_pred ChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHHH
Confidence 111111111121111111 111345799999999999999877665443
No 380
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=91.85 E-value=0.29 Score=44.36 Aligned_cols=93 Identities=12% Similarity=0.155 Sum_probs=60.1
Q ss_pred CC-EEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CC-C-CCCCCccceEEc
Q 017428 159 PK-NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQ-Q-PFPDGQFDLVWS 232 (371)
Q Consensus 159 ~~-~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~-~-~~~~~~fD~v~~ 232 (371)
+. +||-+|+ |.|..+..+++..+++|++++.+++.++.+++ .|.. ..+-..+. .+ . ....+.+|+|+-
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~--~~i~~~~~~~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK--EVLAREDVMAERIRPLDKQRWAAAVD 222 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS--EEEECC---------CCSCCEEEEEE
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc--EEEecCCcHHHHHHHhcCCcccEEEE
Confidence 54 8999997 45778888888778999999999887777754 3421 11111111 01 0 122346998875
Q ss_pred cccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.-. . ..+..+.+.|++||.+++...
T Consensus 223 ~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 223 PVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred CCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 432 1 246788899999999988653
No 381
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.83 E-value=0.18 Score=46.59 Aligned_cols=93 Identities=28% Similarity=0.276 Sum_probs=59.7
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEEcc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWSM 233 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~~~ 233 (371)
++.+||-+|+|. |..+..+++..+++|++++.++...+.+++. .|. . .++ |..+.. -..+.+|+|+-.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa--~-~v~--~~~~~~~~~~~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGA--D-SFL--VSRDQEQMQAAAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCC--S-EEE--ETTCHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCC--c-eEE--eccCHHHHHHhhCCCCEEEEC
Confidence 388999999864 6677777777789999999998877665532 332 1 122 222110 001469998865
Q ss_pred ccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 234 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-.... .++.+.+.|+++|.++....
T Consensus 259 ~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 259 VSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred CCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 33211 24567788999999887653
No 382
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.59 E-value=0.77 Score=41.39 Aligned_cols=96 Identities=18% Similarity=0.065 Sum_probs=60.4
Q ss_pred HHcCCCCCCCCCCCEEEEEC-CC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCC
Q 017428 147 RFAGVSEDPTKRPKNVVDVG-CG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFP 223 (371)
Q Consensus 147 ~~~~~~~~~~~~~~~VLDlG-~G-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 223 (371)
....++ ++.+||=+| +| .|..+..+++..+++|++++ ++...+.+++ .|.. .++..+-.+ ..-.
T Consensus 146 ~~~~~~-----~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~ 212 (321)
T 3tqh_A 146 NQAEVK-----QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAI 212 (321)
T ss_dssp HHTTCC-----TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHC
T ss_pred HhcCCC-----CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhh
Confidence 445554 489999996 55 58888888888799999997 5554555544 4432 122211111 1001
Q ss_pred CCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
-..+|+|+-.-. .. .+..+.++|++||.++..
T Consensus 213 ~~g~D~v~d~~g------~~-~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 213 STPVDAVIDLVG------GD-VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp CSCEEEEEESSC------HH-HHHHHGGGEEEEEEEEEC
T ss_pred ccCCCEEEECCC------cH-HHHHHHHhccCCCEEEEe
Confidence 146898875422 12 347889999999999875
No 383
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.54 E-value=0.71 Score=35.89 Aligned_cols=65 Identities=11% Similarity=0.128 Sum_probs=45.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v~ 231 (371)
..+|+=+|+| .++..+++.+ +.+|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4579999985 4666665544 7899999999988776654 24678889987642 1234688887
Q ss_pred cc
Q 017428 232 SM 233 (371)
Q Consensus 232 ~~ 233 (371)
..
T Consensus 76 ~~ 77 (141)
T 3llv_A 76 IT 77 (141)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 384
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.51 E-value=0.38 Score=43.67 Aligned_cols=56 Identities=20% Similarity=0.288 Sum_probs=40.3
Q ss_pred CCeEEEEcCCCC-CC-CCCCccceEEccccccCc--------------CCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 208 DKVSFQVGDALQ-QP-FPDGQFDLVWSMESGEHM--------------PDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 208 ~~v~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.+..++.+|..+ +. +++++||+|++.--.... ......+.+++++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 357788888764 22 567889999986333211 124678899999999999999865
No 385
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.13 E-value=0.31 Score=44.52 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=51.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCccceEEc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFG---AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWS 232 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~~ 232 (371)
..+|+|+-||.|.+...+.+. | ..|.++|+++...+.-+.++ +...+...|+.++. ++...+|+++.
T Consensus 3 ~~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~------~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNF------PETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC------TTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CCEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhC------CCCceeccccccCCHHHhccCCCCEEEe
Confidence 468999999999999998876 4 35789999999887777654 23456778887763 22336899986
Q ss_pred cc
Q 017428 233 ME 234 (371)
Q Consensus 233 ~~ 234 (371)
..
T Consensus 76 gp 77 (333)
T 4h0n_A 76 SP 77 (333)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 386
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.00 E-value=1.5 Score=39.44 Aligned_cols=78 Identities=15% Similarity=0.087 Sum_probs=55.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+.+||=.|++. .++..+++.+ |.+|++++.++..++.+.+.+...+...++.++..|+.+.. + ..+
T Consensus 8 ~k~vlVTGas~-gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGAN-GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTTS-THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCch-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 57888888664 4555555544 89999999999888877777766553347899999998742 0 024
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 87 ~id~lv~nAg~~ 98 (319)
T 3ioy_A 87 PVSILCNNAGVN 98 (319)
T ss_dssp CEEEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689998876654
No 387
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.97 E-value=0.15 Score=47.59 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=57.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|+=+|+|. |..+..++..+|++|+++|.++..++.+++.. +. .+.....+..++.-.-..+|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 478999999864 44444555555889999999998877665432 21 2222111111110001357988864322
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.....+.-+.+++.+.+||||.++.+.
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 211111112456778899999887654
No 388
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=90.84 E-value=1.7 Score=37.80 Aligned_cols=104 Identities=19% Similarity=0.153 Sum_probs=63.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++...+.+.+.+.......++.++.+|+.+.. +. -+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 567888885 556666666555 88999999998766554444432211236888999988742 10 14
Q ss_pred ccceEEccccccCcCCHHHH-----------HHHHHHhcCC-----CcEEEEEe
Q 017428 226 QFDLVWSMESGEHMPDKSKF-----------VSELARVTAP-----AGTIIIVT 263 (371)
Q Consensus 226 ~fD~v~~~~~l~~~~~~~~~-----------l~~~~~~Lkp-----gG~l~i~~ 263 (371)
..|+++.+.......++... .+.+.+.++. +|.++...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence 57999887665544454432 2344445542 57777654
No 389
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.66 E-value=2.5 Score=37.43 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=66.4
Q ss_pred CCEEEEECCCcC-hHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIG-GSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG-~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++.| ..+..+++.+ |++|+.++.++...+.+++.....+ ++.++.+|+.+.. + .-
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 678999987643 2444444433 8999999999766665555544433 5889999998742 0 12
Q ss_pred CccceEEccccccC-------c-----CCH-----------HHHHHHHHHhcCCCcEEEEEec
Q 017428 225 GQFDLVWSMESGEH-------M-----PDK-----------SKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 225 ~~fD~v~~~~~l~~-------~-----~~~-----------~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+..|+++.+..+.. + .++ -.+++.+.+.++.+|.++.+..
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 57899987765542 1 111 1345566677778888887653
No 390
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.65 E-value=1.9 Score=37.45 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=66.9
Q ss_pred CCEEEEECCCcC-hHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIG-GSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG-~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.|++.+ ..+..+++.+ |++|+.++.++...+.+++.....+- .++.++..|+.+.. +. .
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 678998887632 2444444433 89999999887666666655554432 37899999998753 10 1
Q ss_pred CccceEEccccccC-------c--CCH---H-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 225 GQFDLVWSMESGEH-------M--PDK---S-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 225 ~~fD~v~~~~~l~~-------~--~~~---~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+..|+++.+..+.. + .+. . .+++.+...++++|.++.+..
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 46898887655432 1 111 1 245666777888898887763
No 391
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.65 E-value=0.052 Score=48.81 Aligned_cols=90 Identities=19% Similarity=0.199 Sum_probs=60.3
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCC--CCccceEEc
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFP--DGQFDLVWS 232 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~--~~~fD~v~~ 232 (371)
++.+||-+|+ |.|..+..+++..+++|++++.++...+.+++ .|.. ..+ |..+ ..+. -+.+|+|+-
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~--~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE---EAA--TYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS---EEE--EGGGHHHHHHHTTSEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---EEE--ECCcchhHHHHhcCceEEEE
Confidence 4899999997 45778888888778999999999888777654 3321 112 2211 1100 046899886
Q ss_pred cccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
..- ..++.+.+.|+++|.++....
T Consensus 196 -~g~-------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 196 -VRG-------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp -CSC-------TTHHHHHTTEEEEEEEEEC--
T ss_pred -CCH-------HHHHHHHHhhccCCEEEEEeC
Confidence 321 246788899999999887643
No 392
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.64 E-value=2.9 Score=36.60 Aligned_cols=102 Identities=19% Similarity=0.141 Sum_probs=67.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 221 (371)
+++||=.|++ |..+..+++.+ |++|+.+|.+ ...++.+...+...+ .++.++..|+.+..
T Consensus 10 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 10 DKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHHH
Confidence 6788888865 45555555554 8999999987 666666666665554 57999999998742
Q ss_pred ---CC-----CCccceEEccccccCc------CCHH-----------HHHHHHHHhcCCCcEEEEEe
Q 017428 222 ---FP-----DGQFDLVWSMESGEHM------PDKS-----------KFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 222 ---~~-----~~~fD~v~~~~~l~~~------~~~~-----------~~l~~~~~~LkpgG~l~i~~ 263 (371)
+. -+..|+++.+..+... .++. .+++.+...++.+|.++...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 10 1478998877655332 1122 34456667777888887764
No 393
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.58 E-value=0.35 Score=45.26 Aligned_cols=98 Identities=14% Similarity=0.246 Sum_probs=59.5
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC------CC-CCC------
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL------QQ-PFP------ 223 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~------~~-~~~------ 223 (371)
++.+|+=+|+|. |..+..++..+|++|+++|.++..++.+++ .| ..+...+.. .. .+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~G----~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----LG----AKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----TT----CEECCCCC-----------------CH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cC----Cceeecccccccccccccchhhhcchh
Confidence 478999999985 666666777779999999999987777654 22 233322211 00 000
Q ss_pred ------------CCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 224 ------------DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 224 ------------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
-...|+|+..-.+..-..+.-+-+++.+.+|||..++-..
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 0357998864322211122223468888999998777543
No 394
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=90.34 E-value=0.64 Score=41.63 Aligned_cols=69 Identities=20% Similarity=0.162 Sum_probs=51.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CC-CCccceE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGAK---CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FP-DGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~-~~~fD~v 230 (371)
...+|+|+-||.|.+...+.+. |.+ |.++|+++...+..+.+. +...+..+|+.++. ++ .+.+|++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcccCCcCEE
Confidence 4679999999999999888775 443 589999998877666543 24567889988764 11 1368999
Q ss_pred Ecc
Q 017428 231 WSM 233 (371)
Q Consensus 231 ~~~ 233 (371)
+..
T Consensus 88 ~gg 90 (295)
T 2qrv_A 88 IGG 90 (295)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 395
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=90.27 E-value=1.4 Score=40.89 Aligned_cols=97 Identities=18% Similarity=0.102 Sum_probs=67.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCCCCCccceEEcccccc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 237 (371)
+.+||.|+.+.|.++..++.. .++.+.-|-......+.++..+++++ ++.+... .... .+.||+|+.... -
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~---~~~~~~v~~~lp-k 110 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TADY---PQQPGVVLIKVP-K 110 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSCC---CSSCSEEEEECC-S
T ss_pred CCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-cccc---ccCCCEEEEEcC-C
Confidence 568999999999999888753 34556446666667777888888764 3655432 2222 367998876432 2
Q ss_pred CcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 238 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+.......+..+...|+||+.+++..
T Consensus 111 ~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 TLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 33345677888999999999998765
No 396
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.26 E-value=0.17 Score=46.91 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=58.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+||=+|+|. |..+..++...|++|+++|.++..++.+++.... .+.....+..++.-.-..+|+|+..-..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 358999999863 4445555555588999999999888777654421 2222221111110001258999865433
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.....+.-+.+...+.++|||.++...
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 221111112345667899999877644
No 397
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.17 E-value=0.86 Score=42.08 Aligned_cols=93 Identities=12% Similarity=0.076 Sum_probs=60.9
Q ss_pred CCCCEEEEECCC--cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CCCCCccce
Q 017428 157 KRPKNVVDVGCG--IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDL 229 (371)
Q Consensus 157 ~~~~~VLDlG~G--tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~ 229 (371)
.++.+||=+|++ .|..+..+++..|++|+++. ++..++.+++ .|. -.++...-.+. ....+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa---~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGA---EEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTC---SEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCC---cEEEECCCchHHHHHHHHccCCccE
Confidence 358899999983 68889999988899999885 7777776654 443 12222211111 012345998
Q ss_pred EEccccccCcCCHHHHHHHHHHhc-CCCcEEEEEe
Q 017428 230 VWSMESGEHMPDKSKFVSELARVT-APAGTIIIVT 263 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~L-kpgG~l~i~~ 263 (371)
|+-.-. . ...+..+.+.| ++||++++..
T Consensus 235 v~d~~g-----~-~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCIT-----N-VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSC-----S-HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCC-----c-hHHHHHHHHHhhcCCCEEEEEe
Confidence 874321 2 34577888888 6999998764
No 398
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.11 E-value=0.59 Score=42.30 Aligned_cols=93 Identities=17% Similarity=0.152 Sum_probs=61.2
Q ss_pred CC-EEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CC-C-CCCCCccceEEc
Q 017428 159 PK-NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQ-Q-PFPDGQFDLVWS 232 (371)
Q Consensus 159 ~~-~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~-~-~~~~~~fD~v~~ 232 (371)
+. +||-+|+ |.|..+..+++..+++|++++.+++.++.+++ .|.. ..+-..+. .+ . ....+.+|+|+-
T Consensus 150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~--~v~~~~~~~~~~~~~~~~~~~d~vid 223 (330)
T 1tt7_A 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGAS--EVISREDVYDGTLKALSKQQWQGAVD 223 (330)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCS--EEEEHHHHCSSCCCSSCCCCEEEEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc--EEEECCCchHHHHHHhhcCCccEEEE
Confidence 54 8999997 45778888888778999999999887777764 2321 11111111 11 1 122346898875
Q ss_pred cccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.-. . ..+..+.+.|++||.+++...
T Consensus 224 ~~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 224 PVG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp SCC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred CCc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 432 2 357888999999999988653
No 399
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.01 E-value=0.89 Score=43.12 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=62.7
Q ss_pred CCCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--------------
Q 017428 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-------------- 220 (371)
Q Consensus 157 ~~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------------- 220 (371)
.++.+||=.|+ |.|..+..+++..+++|++++.++..++.+++ .|...-+.....|..+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchhhhH
Confidence 35899999996 34778888888779999999999988887754 34321111111121100
Q ss_pred ------CCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 221 ------PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 221 ------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
......+|+|+-.-. . ..++.+.+.|++||.+++..
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG-----R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC-----H--HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHhCCCceEEEECCC-----c--hHHHHHHHHHhcCCEEEEEe
Confidence 001246898875432 1 35788889999999999865
No 400
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.93 E-value=1.6 Score=37.93 Aligned_cols=104 Identities=13% Similarity=0.025 Sum_probs=66.6
Q ss_pred CCCEEEEECCC-cChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----C
Q 017428 158 RPKNVVDVGCG-IGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (371)
Q Consensus 158 ~~~~VLDlG~G-tG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 223 (371)
++++||=.|++ +|..+..+++.+ +++|+.++.+....+.+++.....+ ++.++..|+.+.. + .
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 47889988874 355666666555 8899999988665555555544433 5788999998742 0 1
Q ss_pred CCccceEEccccccCc----------CC---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 224 DGQFDLVWSMESGEHM----------PD---KS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~~----------~~---~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
.+..|+++.+..+... .+ +. .+++.+...++++|.++....
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 2478999877654321 11 11 344556666777888777653
No 401
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.84 E-value=0.24 Score=45.94 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=55.1
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|+=+|+|. |..+..++...|++|+++|.++..++.+++.. +. .+.....+..++.-.-..+|+|+..-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 468999999853 33344444445899999999998776655422 21 2322222211111001357988765433
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.....+.-+.+++.+.+++||.++...
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEe
Confidence 211111112466778899999877654
No 402
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.83 E-value=3.3 Score=36.60 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=64.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHH-HHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPV-QAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++ |..+..+++.+ |++|+.++.+.. ..+...+.....+ .++.++..|+.+.. + .-
T Consensus 47 gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 6788888855 55555555555 889999998765 3444444444443 57999999998742 1 01
Q ss_pred CccceEEccccccCc----C-----CHH-----------HHHHHHHHhcCCCcEEEEEe
Q 017428 225 GQFDLVWSMESGEHM----P-----DKS-----------KFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~----~-----~~~-----------~~l~~~~~~LkpgG~l~i~~ 263 (371)
+..|+++.+...... . ++. .+++.+.+.++.+|.++.+.
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 468998876443221 1 111 35566677778889877764
No 403
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.74 E-value=2.3 Score=35.98 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=50.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCe-EEEEcCCCC-CCCCCCccceEEcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKV-SFQVGDALQ-QPFPDGQFDLVWSM 233 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~-~~~~~~~fD~v~~~ 233 (371)
+++||=.| |+|..+..+++.+ +.+|++++-++...+.... .++ .++.+|+.+ +.-.-+..|+|+.+
T Consensus 21 ~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 21 GMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 78899887 5677777776665 7899999998876544322 257 899999872 11112468999877
Q ss_pred ccccCcCCH
Q 017428 234 ESGEHMPDK 242 (371)
Q Consensus 234 ~~l~~~~~~ 242 (371)
.......++
T Consensus 92 ag~~~~~~~ 100 (236)
T 3e8x_A 92 AGSGPHTGA 100 (236)
T ss_dssp CCCCTTSCH
T ss_pred CCCCCCCCc
Confidence 665543333
No 404
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.57 E-value=1.1 Score=43.07 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=56.1
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
++.+|+=+|+|. |......++.+|++|+++|.++...+.+++ .| +.+ .++.+. -...|+|+..-.-
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~G----a~~--~~l~e~---l~~aDvVi~atgt 339 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EG----FDV--VTVEEA---IGDADIVVTATGN 339 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHH---GGGCSEEEECSSS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC----CEE--ecHHHH---HhCCCEEEECCCC
Confidence 488999999864 444445555558999999999987766543 23 222 232221 1457998875433
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.++-+ .+..+.+||||+++.+.
T Consensus 340 ~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 340 KDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp SCSBC-----HHHHHHSCTTCEEEECS
T ss_pred HHHHH-----HHHHHhcCCCcEEEEeC
Confidence 23212 25667799999988754
No 405
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.55 E-value=0.14 Score=47.49 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=58.6
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC--C----------------
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA--L---------------- 218 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~---------------- 218 (371)
++.+|+=+|+|. |..+..++..+|++|+++|.++..++.+++ .| .++...+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lG----a~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VG----AQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TT----CEECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC----CeEEeccccccccccchhhhhHHHHhh
Confidence 478999999985 556666666669999999999987776654 22 33332211 0
Q ss_pred ---CCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 219 ---QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 219 ---~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
.+.-.-...|+|+..-.+..-..+.-+-+++.+.+|||+.++-.
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 00000156899986532211111112346888899998876654
No 406
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.80 E-value=0.21 Score=46.33 Aligned_cols=92 Identities=14% Similarity=0.124 Sum_probs=58.7
Q ss_pred CCCCEEEEEC-CC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-----CCCccce
Q 017428 157 KRPKNVVDVG-CG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-----PDGQFDL 229 (371)
Q Consensus 157 ~~~~~VLDlG-~G-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~fD~ 229 (371)
.++.+||=+| +| .|..+..+++..+++|++++ ++...+.+++ .|.. .++ |..+..+ ....+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~--~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGAD---DVI--DYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEE--ETTSSCHHHHHHTSCCBSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCCC---EEE--ECCchHHHHHHhhcCCCCE
Confidence 3589999999 34 57788888887789999998 6666655533 3421 122 2222111 1146898
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
|+-.-. .....+....+.|++||.++...
T Consensus 252 vid~~g-----~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 252 ILDNVG-----GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEESSC-----TTHHHHGGGGBCSSSCCEEEESC
T ss_pred EEECCC-----ChhhhhHHHHHhhcCCcEEEEeC
Confidence 875432 22234577788999999998754
No 407
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.72 E-value=2.2 Score=34.64 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=53.7
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----C-CCCccceEE
Q 017428 159 PKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----F-PDGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~Gt-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~-~~~~fD~v~ 231 (371)
+.+|+=+|+|. |......+... +..|+++|.+++.++.+++ . .+.++.+|..+.. . .-..+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 56899998763 33322233334 6789999999987766543 2 3456777775521 1 134688887
Q ss_pred ccccccCcCCH--HHHHHHHHHhcCCCcEEEEE
Q 017428 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~ 262 (371)
... ++. ...+-...+.+.|++.++..
T Consensus 111 ~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 111 LAM-----PHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ECC-----SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EeC-----CChHHHHHHHHHHHHHCCCCEEEEE
Confidence 642 222 22223345556777777764
No 408
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.69 E-value=2.2 Score=36.89 Aligned_cols=100 Identities=15% Similarity=0.124 Sum_probs=65.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----------CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----------PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------~~~ 225 (371)
+++||=.|++ |..+..+++.+ |++|+.+|.++..++...+.+ ..++.++..|+.+..- .-+
T Consensus 8 gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6788888855 45555555554 899999999988776655543 2468899999987420 014
Q ss_pred ccceEEccccccCcC-----C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 226 QFDLVWSMESGEHMP-----D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 226 ~fD~v~~~~~l~~~~-----~---~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
..|+++.+..+.... + +. .+.+.+...++.+|.++....
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 689988766544321 1 11 244556666777888877653
No 409
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.62 E-value=3.7 Score=36.33 Aligned_cols=103 Identities=20% Similarity=0.242 Sum_probs=66.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC--HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS--PVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 223 (371)
+++||=.|++ |..+..+++.+ |++|+.++.+ ....+...+.+...+ .++.++.+|+.+.. + .
T Consensus 49 ~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 6788888854 55566666555 8899999886 344555555555544 57889999987742 0 0
Q ss_pred CCccceEEccccccC-cC-----C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 224 DGQFDLVWSMESGEH-MP-----D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~-~~-----~---~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-+..|+++.+..... .. + +. .+++.+...++.+|.++.+..
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 146899887765432 11 1 11 345566677888898887753
No 410
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.50 E-value=1.9 Score=38.22 Aligned_cols=103 Identities=20% Similarity=0.175 Sum_probs=66.0
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~Gt-G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.|++. ...+..+++.+ |++|+.+|.++...+.+++.....+ ++.++.+|+.+.. +. -
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899898754 34555555544 8999999999766555555544443 4688999998742 10 1
Q ss_pred CccceEEccccccCc---------C---CHH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 225 GQFDLVWSMESGEHM---------P---DKS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~---------~---~~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+..|+++.+..+... . ++. .+.+.+...++.+|.++.+..
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 478999877655321 1 111 345556667777888887653
No 411
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.16 E-value=1.4 Score=38.16 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=64.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF----GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+.+||=.| |+|.++..+++.+ +++|++++.++...+...+.+...+ .++.++.+|+.+.. +. .
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 56777666 5566666655433 6899999999887776666665544 47889999988742 00 1
Q ss_pred CccceEEccccccCc--------CCHH-----------HHHHHHHHhcCCCcEEEEEe
Q 017428 225 GQFDLVWSMESGEHM--------PDKS-----------KFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~--------~~~~-----------~~l~~~~~~LkpgG~l~i~~ 263 (371)
+.+|+|+.+...... .++. .+++.+.+.++++|.++++.
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 368988876543321 1111 24455566666678877764
No 412
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.12 E-value=7.1 Score=33.98 Aligned_cols=103 Identities=18% Similarity=0.164 Sum_probs=66.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS-PVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++ |..+..+++.+ |++|+.++.. ....+...+.+...+ .++.++.+|+.+.. + .-
T Consensus 31 gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 31 GKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 6788888865 45555555554 8899988654 455555555555544 57899999998742 1 01
Q ss_pred CccceEEccccccCcC--------CHH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 225 GQFDLVWSMESGEHMP--------DKS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~~--------~~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+..|+++.+..+.... ++. .+++.+.+.++.+|.++....
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 4689988776543321 111 345666777888898887753
No 413
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.84 E-value=7.3 Score=29.46 Aligned_cols=90 Identities=18% Similarity=0.111 Sum_probs=52.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v~ 231 (371)
+++|+=+|+ |..+..+++.+ +.+|+++|.++..++..++. . ++.++.+|..+.. ..-..+|+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 578998887 55555555544 78999999998876554431 1 3556777765421 1124689887
Q ss_pred ccccccCcCCHHHHHHHHHHhcCCCcEEEE
Q 017428 232 SMESGEHMPDKSKFVSELARVTAPAGTIII 261 (371)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i 261 (371)
..-.- ......+..+.+.+.++ .+++
T Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 75 AVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp ECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred EeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 65311 11223445556667775 4443
No 414
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.66 E-value=0.3 Score=45.52 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=32.4
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANA 199 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~ 199 (371)
++.+|+=+|+|. |..+..+++.+|++|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 478999999985 555666677678899999999876665543
No 415
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=87.62 E-value=2.1 Score=37.06 Aligned_cols=76 Identities=24% Similarity=0.133 Sum_probs=52.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.| |+|..+..+++.+ +++|++++. ++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 21 ~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 21 GKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56788666 5677777777665 789999998 7776666555555444 47889999988742 10 1
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+|+.+....
T Consensus 98 ~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 98 GGLDFVMSNSGME 110 (274)
T ss_dssp SCEEEEECCCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988765543
No 416
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=87.45 E-value=5.6 Score=35.19 Aligned_cols=75 Identities=20% Similarity=0.184 Sum_probs=51.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 221 (371)
+++||=.|++. ..+..+++.+ |++|+.+|.+ +..++.+.+.+...+ .++.++..|+.+..
T Consensus 28 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 28 GKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDAM 104 (299)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHH
Confidence 67888888655 4555555544 8999999987 666666666665554 57999999998742
Q ss_pred ---C-----CCCccceEEccccc
Q 017428 222 ---F-----PDGQFDLVWSMESG 236 (371)
Q Consensus 222 ---~-----~~~~fD~v~~~~~l 236 (371)
+ .-+..|+++.+..+
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 1 11478998876554
No 417
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.08 E-value=0.26 Score=46.26 Aligned_cols=41 Identities=22% Similarity=0.387 Sum_probs=32.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRAN 198 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~ 198 (371)
++.+|+=+|+|. |..+..++..+|++|+++|.++...+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 478999999985 55566667767899999999987766653
No 418
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.90 E-value=2.5 Score=39.64 Aligned_cols=90 Identities=16% Similarity=0.157 Sum_probs=60.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v~ 231 (371)
..+|+=+|+| .++..+++.+ +..|+++|.+++.++.+++ . .+.++.+|+.+.. ..-...|+|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 4678888874 4555555544 7899999999999887764 2 3567899988742 2235678877
Q ss_pred ccccccCcCCH--HHHHHHHHHhcCCCcEEEEEe
Q 017428 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+.. ++. ...+-...+.+.|...++.-.
T Consensus 74 v~~-----~~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 74 NAI-----DDPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp ECC-----SSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ECC-----CChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 643 333 334555667778887777744
No 419
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.76 E-value=4.1 Score=35.48 Aligned_cols=78 Identities=21% Similarity=0.273 Sum_probs=53.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 221 (371)
+++||=.|++ |..+..+++.+ |++|+.+|.+ ++.++...+.+...+ .++.++..|+.+..
T Consensus 13 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 13 GKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRESL 89 (278)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHH
Confidence 6788888854 55555555554 8999999987 666666655555544 57999999998742
Q ss_pred ---CC-----CCccceEEccccccCc
Q 017428 222 ---FP-----DGQFDLVWSMESGEHM 239 (371)
Q Consensus 222 ---~~-----~~~fD~v~~~~~l~~~ 239 (371)
+. -+..|+++.+..+...
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 10 1478999887665443
No 420
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=86.55 E-value=3.1 Score=36.03 Aligned_cols=106 Identities=18% Similarity=0.148 Sum_probs=66.9
Q ss_pred CCCEEEEECCCcC-hHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----C
Q 017428 158 RPKNVVDVGCGIG-GSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (371)
Q Consensus 158 ~~~~VLDlG~GtG-~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 223 (371)
.++.+|=-|++.+ ..+..+++.+ |++|+.+|.++..++.+.+.++..+- .++.++..|+.+.. + .
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3788998886431 2334444433 89999999998888877777765542 46888999987742 0 1
Q ss_pred CCccceEEccccccCc-------C--CHH--------------HHHHHHHHhcCCCcEEEEEec
Q 017428 224 DGQFDLVWSMESGEHM-------P--DKS--------------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~~-------~--~~~--------------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-+..|+++.+..+... . +.+ ...+.+...++.+|.++....
T Consensus 84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTY 147 (256)
T ss_dssp HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEEC
T ss_pred hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEec
Confidence 2678988876443221 1 111 122344566778898887653
No 421
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.06 E-value=11 Score=32.66 Aligned_cols=103 Identities=22% Similarity=0.184 Sum_probs=67.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++ |..+..+++.+ |++|+.++. +....+...+.+...+ .++.++..|+.+.. + .-
T Consensus 18 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 18 GKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5678877754 55556666555 889998775 4555665555565544 57999999998742 0 01
Q ss_pred CccceEEccccccCcC-----C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 225 GQFDLVWSMESGEHMP-----D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~~-----~---~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+..|+++.+..+.... + +. .+.+.+.+.++.+|.+++...
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 4689998776554321 1 11 345667778888998888764
No 422
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.88 E-value=3.7 Score=35.69 Aligned_cols=75 Identities=20% Similarity=0.168 Sum_probs=55.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (371)
++.+|=-|++.|. +..+++.+ |++|+.+|.+++.++.+.+.++..+ .++.++..|+.+.. -.-+
T Consensus 7 gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 7 NKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6778888866654 44555444 8999999999999988888887766 57999999998752 0126
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
..|+++.+..+
T Consensus 84 ~iDiLVNNAGi 94 (254)
T 4fn4_A 84 RIDVLCNNAGI 94 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78998876543
No 423
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=85.83 E-value=1.3 Score=40.06 Aligned_cols=66 Identities=14% Similarity=0.053 Sum_probs=48.7
Q ss_pred CEEEEECCCcChHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEcc
Q 017428 160 KNVVDVGCGIGGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSM 233 (371)
Q Consensus 160 ~~VLDlG~GtG~~~~~l~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~ 233 (371)
++|||+=||.|.+...+.+. |.+ |.++|+++...+.-+.+. + -.++.+|+.++.. .-..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEec
Confidence 47999999999999888765 554 668999998877766553 2 3567899887642 12458988864
No 424
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=85.66 E-value=11 Score=33.51 Aligned_cols=79 Identities=18% Similarity=0.096 Sum_probs=51.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCCC-CC--CCccceE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQQP-FP--DGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~-~~--~~~fD~v 230 (371)
++++||=.| |+|..+..+++.+ +.+|++++.++...+.....+.... +.++.++ .+|+.+.. +. -..+|+|
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 367899887 5677777777655 7899999998876554444332211 1468888 78987643 11 1358998
Q ss_pred EccccccC
Q 017428 231 WSMESGEH 238 (371)
Q Consensus 231 ~~~~~l~~ 238 (371)
+.+.....
T Consensus 88 ih~A~~~~ 95 (342)
T 1y1p_A 88 AHIASVVS 95 (342)
T ss_dssp EECCCCCS
T ss_pred EEeCCCCC
Confidence 87655443
No 425
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.47 E-value=6.4 Score=34.18 Aligned_cols=77 Identities=12% Similarity=0.018 Sum_probs=56.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (371)
++.+|=-|++. ..+..+++.+ |++|+.+|.+++.++.+.+.+...+ .++.++..|+.+.. -.-+
T Consensus 9 gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 9 GKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 66777767554 4555555555 8999999999999888888777766 47889999988742 1236
Q ss_pred ccceEEccccccC
Q 017428 226 QFDLVWSMESGEH 238 (371)
Q Consensus 226 ~fD~v~~~~~l~~ 238 (371)
+.|+++.+..+..
T Consensus 86 ~iDiLVNNAG~~~ 98 (255)
T 4g81_D 86 HVDILINNAGIQY 98 (255)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCCCCC
Confidence 7899987765544
No 426
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=85.33 E-value=6.4 Score=34.58 Aligned_cols=77 Identities=14% Similarity=0.126 Sum_probs=54.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C----C------CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P----F------PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~----~------~~ 224 (371)
+++||=.|++ |..+..+++.+ |++|++++.++...+.+.+.+...+ ..++.++.+|+.+. . + ..
T Consensus 12 ~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 12 RRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 5677777754 55666666555 8999999999988777766665543 24799999999885 2 0 01
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+..+.
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4789998876654
No 427
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.30 E-value=2.6 Score=36.55 Aligned_cols=102 Identities=19% Similarity=0.143 Sum_probs=63.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEE-eCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGI-TLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gv-D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.|++. ..+..+++.+ |++|+.+ +.+....+.+.+.+...+ .++.++..|+.+.. +. -
T Consensus 8 ~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGR-DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 67888888654 4555555544 8899988 667666666666555444 57889999998742 10 1
Q ss_pred CccceEEcccccc-C---cC--C---HH-----------HHHHHHHHhcCCCcEEEEEe
Q 017428 225 GQFDLVWSMESGE-H---MP--D---KS-----------KFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 225 ~~fD~v~~~~~l~-~---~~--~---~~-----------~~l~~~~~~LkpgG~l~i~~ 263 (371)
+..|+++.+.... . +. + +. .+.+.+.+.++.+|.++...
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 4689888765433 1 11 1 11 34455566666778877765
No 428
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.18 E-value=7.3 Score=32.16 Aligned_cols=94 Identities=10% Similarity=0.120 Sum_probs=58.2
Q ss_pred CEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEcccc
Q 017428 160 KNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMES 235 (371)
Q Consensus 160 ~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~ 235 (371)
++||=.| |+|..+..+++.+ +.+|++++-++..+.... +++.++.+|+.+... .-..+|+|+.+..
T Consensus 1 MkvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTLSDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CeEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhhhhhcCCCEEEECCc
Confidence 3677776 5677777776655 789999999876544321 468999999987531 1145799887654
Q ss_pred ccCc--CCHHHHHHHHHHhcCC--CcEEEEEe
Q 017428 236 GEHM--PDKSKFVSELARVTAP--AGTIIIVT 263 (371)
Q Consensus 236 l~~~--~~~~~~l~~~~~~Lkp--gG~l~i~~ 263 (371)
...- ........++.+.++. .+.+++..
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred CCccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 4221 2223444555555544 35666654
No 429
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.68 E-value=1.7 Score=39.75 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=53.3
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEe-CCHH---HHHHHHHHHHHcCCCCCeEEEEc------CCCCCCCCCC
Q 017428 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGIT-LSPV---QAQRANALAAARGLADKVSFQVG------DALQQPFPDG 225 (371)
Q Consensus 158 ~~~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD-~s~~---~~~~a~~~~~~~~~~~~v~~~~~------d~~~~~~~~~ 225 (371)
++.+||=+|+ |.|..+..+++..|++++++. .++. ..+.++ ..|.. .++.. ++.+..-..+
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~~~~~~~ 239 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE---HVITEEELRRPEMKNFFKDMP 239 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS---EEEEHHHHHSGGGGGTTSSSC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc---EEEecCcchHHHHHHHHhCCC
Confidence 4899999996 468888899987788776654 4332 233333 34431 12221 1111110112
Q ss_pred ccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 226 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.+|+|+-.- .. .. +..+.++|++||.+++..
T Consensus 240 ~~Dvvid~~-----g~-~~-~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 240 QPRLALNCV-----GG-KS-STELLRQLARGGTMVTYG 270 (357)
T ss_dssp CCSEEEESS-----CH-HH-HHHHHTTSCTTCEEEECC
T ss_pred CceEEEECC-----Cc-HH-HHHHHHhhCCCCEEEEEe
Confidence 489887432 22 22 345789999999998864
No 430
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.46 E-value=4.3 Score=33.82 Aligned_cols=95 Identities=15% Similarity=0.137 Sum_probs=59.8
Q ss_pred CEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCccceEEcccc
Q 017428 160 KNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMES 235 (371)
Q Consensus 160 ~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~ 235 (371)
++||=.| |+|..+..+++.+ +.+|++++-++..+... ...++.++.+|+.+... .-+.+|+|+.+..
T Consensus 1 MkilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CEEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhhcccCCEEEECCc
Confidence 3577777 5677777777665 78999999998665422 12478999999987531 1145798887665
Q ss_pred ccCcC----CHHHHHHHHHHhcCC-CcEEEEEe
Q 017428 236 GEHMP----DKSKFVSELARVTAP-AGTIIIVT 263 (371)
Q Consensus 236 l~~~~----~~~~~l~~~~~~Lkp-gG~l~i~~ 263 (371)
..+-+ .......++.+.++. |+.+++..
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 53211 123344555555543 45666653
No 431
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.90 E-value=5.9 Score=37.22 Aligned_cols=88 Identities=18% Similarity=0.148 Sum_probs=53.4
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
.+.+|+=+|+|. |......++.+|++|+++|.++.....+.. .| .. ..++.+. -...|+|+....-
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~----~G----~~--v~~Leea---l~~ADIVi~atgt 285 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM----DG----FR--LVKLNEV---IRQVDIVITCTGN 285 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CE--ECCHHHH---TTTCSEEEECSSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH----cC----CE--eccHHHH---HhcCCEEEECCCC
Confidence 478999999986 444444555559999999999865444332 22 22 2233221 1346988875322
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
.++-+ .+..+.+|||++|+-+.
T Consensus 286 ~~lI~-----~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 286 KNVVT-----REHLDRMKNSCIVCNMG 307 (435)
T ss_dssp SCSBC-----HHHHHHSCTTEEEEECS
T ss_pred cccCC-----HHHHHhcCCCcEEEEec
Confidence 23222 35667899998777654
No 432
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.79 E-value=4.9 Score=34.94 Aligned_cols=102 Identities=18% Similarity=0.134 Sum_probs=64.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEE-eCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGI-TLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gv-D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++. ..+..+++.+ |++|+.+ ..++...+...+.+...+ .++.++..|+.+.. + .-
T Consensus 27 ~k~~lVTGas~-GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 27 NKVAIVTGASR-GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67788888654 4455555444 8898887 445555665555555544 57899999998742 0 01
Q ss_pred CccceEEccccccCcC--------CHH-----------HHHHHHHHhcCCCcEEEEEe
Q 017428 225 GQFDLVWSMESGEHMP--------DKS-----------KFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~~--------~~~-----------~~l~~~~~~LkpgG~l~i~~ 263 (371)
+..|+++.+..+.... ++. .+++.+.+.++.+|.++...
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 4789988776553321 111 24556667777888888765
No 433
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.45 E-value=3.8 Score=36.05 Aligned_cols=99 Identities=19% Similarity=0.148 Sum_probs=65.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (371)
++.+|=-|++.| .+..+++.+ |++|+.+|.+++.++.+.+.+ + .++.++.+|+.+.. -.-+
T Consensus 29 gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 29 AKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 677888886655 555555554 899999999998877655443 2 46788899988742 0125
Q ss_pred ccceEEccccccCcC--------CHH-----------HHHHHHHHhcCCCcEEEEEe
Q 017428 226 QFDLVWSMESGEHMP--------DKS-----------KFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 226 ~fD~v~~~~~l~~~~--------~~~-----------~~l~~~~~~LkpgG~l~i~~ 263 (371)
+.|+++.+....... +++ .+.+.+...|+.+|.++...
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 789888765543321 121 34555667778888877764
No 434
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.32 E-value=11 Score=32.31 Aligned_cols=73 Identities=19% Similarity=0.167 Sum_probs=50.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+++||=.|++ |..+..+++.+ |++|+.+|.++..++...+.+ ..++.++..|+.+.. + .-+
T Consensus 8 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 8 GKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 6788888854 55555665555 899999999987766554443 246889999998742 0 124
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789998876553
No 435
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=83.19 E-value=4.6 Score=31.78 Aligned_cols=93 Identities=22% Similarity=0.224 Sum_probs=51.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceE
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLV 230 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v 230 (371)
++.+|+=+|+| .++..+++.+ +.+|+++|.++..++.++. . .++.++.+|..+.. ..-..+|+|
T Consensus 18 ~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 18 KSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHcCcccCCEE
Confidence 47899999875 4444444433 7899999999876543321 1 23556667764421 112458888
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
+..-.- ......+..+.+.+.|...++..
T Consensus 89 i~~~~~---~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 89 FAFTND---DSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp EECSSC---HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEEeCC---cHHHHHHHHHHHHHCCCCeEEEE
Confidence 765321 11223334444545555555553
No 436
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=83.06 E-value=0.75 Score=42.25 Aligned_cols=97 Identities=10% Similarity=0.071 Sum_probs=56.0
Q ss_pred CC-CEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc------CCCC-C-CC---C
Q 017428 158 RP-KNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVG------DALQ-Q-PF---P 223 (371)
Q Consensus 158 ~~-~~VLDlG~--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~-~-~~---~ 223 (371)
++ .+||=+|+ |.|..+..+++..+++++++.-++..++..++.++..|.. .++.. |+.+ + .. .
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHHhhcc
Confidence 47 89999986 3577888888877999888875544311111222334431 12211 1110 0 00 1
Q ss_pred CCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 224 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
...+|+|+-.-. . .... .+.++|+++|.+++...
T Consensus 243 ~~g~Dvvid~~G-----~-~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 243 GGEAKLALNCVG-----G-KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp TCCEEEEEESSC-----H-HHHH-HHHHTSCTTCEEEECCC
T ss_pred CCCceEEEECCC-----c-hhHH-HHHHHhccCCEEEEecC
Confidence 246898875422 1 2233 67899999999988653
No 437
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.03 E-value=1.7 Score=39.57 Aligned_cols=89 Identities=17% Similarity=0.068 Sum_probs=56.8
Q ss_pred CEEEEE-CCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC--------CCccce
Q 017428 160 KNVVDV-GCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP--------DGQFDL 229 (371)
Q Consensus 160 ~~VLDl-G~G-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--------~~~fD~ 229 (371)
.+||=. |+| .|..+..+++..|++|++++.+++.++.+++ .|. -.++ |..+..+. ...+|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~Ga---~~~~--~~~~~~~~~~v~~~~~~~g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IGA---AHVL--NEKAPDFEATLREVMKAEQPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HTC---SEEE--ETTSTTHHHHHHHHHHHHCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---CEEE--ECCcHHHHHHHHHHhcCCCCcE
Confidence 566644 333 4666777777779999999999988887764 232 1222 22222111 136998
Q ss_pred EEccccccCcCCHHHHHHHHHHhcCCCcEEEEEec
Q 017428 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 230 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 264 (371)
|+-+-.- ..+..+.+.|+++|.+++...
T Consensus 237 vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 237 FLDAVTG-------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEESSCH-------HHHHHHHHHSCTTCEEEECCC
T ss_pred EEECCCC-------hhHHHHHhhhcCCCEEEEEec
Confidence 8854321 234778899999999998753
No 438
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=82.90 E-value=6 Score=34.53 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=53.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC---------CCCc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF---------PDGQ 226 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------~~~~ 226 (371)
+++||=.|+ +|..+..+++.+ |++|+.+|.++...+.+.+.+...+ .++.++..|+.+..- ..+.
T Consensus 33 gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 33 GRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 567777775 455666666555 8999999999887777766666554 579999999987530 0147
Q ss_pred cceEEccccc
Q 017428 227 FDLVWSMESG 236 (371)
Q Consensus 227 fD~v~~~~~l 236 (371)
.|+++.+...
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999877654
No 439
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=82.37 E-value=8.2 Score=30.13 Aligned_cols=94 Identities=10% Similarity=0.072 Sum_probs=56.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS-PVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v 230 (371)
..+|+=+|+ |..+..+++.+ +..|+.+|.+ ++..+..+... +.++.++.+|..+.. ..-...|+|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 456887875 66776666655 7899999997 44443333221 235788999987642 112467888
Q ss_pred EccccccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
++...- ......+....+.+.|...++..
T Consensus 76 i~~~~~---d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 76 LALSDN---DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp EECSSC---HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEecCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 765311 11234455566667777776663
No 440
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=82.11 E-value=6.9 Score=33.37 Aligned_cols=75 Identities=17% Similarity=0.100 Sum_probs=54.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+++||=.|+ +|..+..+++.+ |++|+.+|.++..++...+.+...+ .++.++..|+.+.. + ..+
T Consensus 9 ~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 9 NKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 677888885 455566666555 8899999999988888777776654 57889999998742 0 013
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
..|+++.+..+
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999877654
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=82.09 E-value=8.5 Score=33.98 Aligned_cols=88 Identities=17% Similarity=0.063 Sum_probs=51.0
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCCCCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV-GDALQQPFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fD~v~~~~~ 235 (371)
++.+|+=+|+|. |......+..++.+|+++|.++...+.+. ..+ +.+.. .++.+. -...|+|+..-.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~~l~~~---l~~aDvVi~~~p 222 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFHISKAAQE---LRDVDVCINTIP 222 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEEGGGHHHH---TTTCSEEEECCS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecChhhHHHH---hcCCCEEEECCC
Confidence 478999999864 33333333444889999999987554432 223 33321 121111 145799887655
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
.+.+ +. +....+|||+.++-+
T Consensus 223 ~~~i-~~-----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 223 ALVV-TA-----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp SCCB-CH-----HHHHHSCTTCEEEEC
T ss_pred hHHh-CH-----HHHHhcCCCCEEEEe
Confidence 4332 22 344578999877654
No 442
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=82.08 E-value=7 Score=36.94 Aligned_cols=104 Identities=16% Similarity=0.112 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC
Q 017428 138 QVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (371)
Q Consensus 138 ~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 216 (371)
.+..+..+.+.....- .+.+|+=+|+|. |......++.+|++|+++|.++.....+.. .| +.+ .+
T Consensus 230 ~eslvdgI~Ratg~~L----~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~----~G----~~v--v~ 295 (464)
T 3n58_A 230 KESLVDGIRRGTDVMM----AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM----DG----FEV--VT 295 (464)
T ss_dssp HHHHHHHHHHHHCCCC----TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH----TT----CEE--CC
T ss_pred hHHHHHHHHHhcCCcc----cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh----cC----cee--cc
Confidence 3445555555443322 478999999885 444444455559999999999865433321 22 332 23
Q ss_pred CCCCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEEe
Q 017428 217 ALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 217 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 263 (371)
+.+. + ...|+|+....-.|+-+ .+....+|||++|+-+.
T Consensus 296 LeEl-L--~~ADIVv~atgt~~lI~-----~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 296 LDDA-A--STADIVVTTTGNKDVIT-----IDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp HHHH-G--GGCSEEEECCSSSSSBC-----HHHHHHSCTTEEEEECS
T ss_pred HHHH-H--hhCCEEEECCCCccccC-----HHHHhcCCCCeEEEEcC
Confidence 3221 1 35788876432223222 46677889999887654
No 443
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.98 E-value=12 Score=32.90 Aligned_cols=77 Identities=21% Similarity=0.257 Sum_probs=52.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGL-ADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.| |+|..+..+++.+ |++|+.++.++..++...+.+...+. ..++.++..|+.+.. +. -
T Consensus 26 ~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 26 GKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 56777666 4566666666655 88999999998877766655554431 116889999998742 10 1
Q ss_pred CccceEEccccc
Q 017428 225 GQFDLVWSMESG 236 (371)
Q Consensus 225 ~~fD~v~~~~~l 236 (371)
+..|+++.+..+
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468998877654
No 444
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.76 E-value=8.3 Score=33.40 Aligned_cols=76 Identities=18% Similarity=0.093 Sum_probs=54.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+.+||=.|+ +|..+..+++.+ |++|+++|.++..++...+.+...+ .++.++.+|+.+.. + ..+
T Consensus 31 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 31 GEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 577888874 566666666655 7899999999887776666665544 47899999998742 0 014
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
.+|+|+.+....
T Consensus 108 ~iD~li~~Ag~~ 119 (272)
T 1yb1_A 108 DVSILVNNAGVV 119 (272)
T ss_dssp CCSEEEECCCCC
T ss_pred CCcEEEECCCcC
Confidence 689988776543
No 445
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=81.73 E-value=4.2 Score=37.80 Aligned_cols=80 Identities=16% Similarity=0.173 Sum_probs=56.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---C-CEEEEEeCCHHHHHHHHHHHHHcC--CCCCeEEEEcCCCCCC-----CCCCcc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---G-AKCQGITLSPVQAQRANALAAARG--LADKVSFQVGDALQQP-----FPDGQF 227 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~-~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~-----~~~~~f 227 (371)
+++||=.| |+|..+..+++.+ + ..|+++|.++..+......+.... .+.++.++.+|+.+.. +....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 67899887 5678887777766 5 699999999887766555444321 1247899999998742 123578
Q ss_pred ceEEccccccCc
Q 017428 228 DLVWSMESGEHM 239 (371)
Q Consensus 228 D~v~~~~~l~~~ 239 (371)
|+|+......|.
T Consensus 114 D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 114 DYVLNLSALKHV 125 (399)
T ss_dssp SEEEECCCCCCG
T ss_pred CEEEECCCcCCC
Confidence 999876665554
No 446
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=81.69 E-value=14 Score=30.98 Aligned_cols=77 Identities=17% Similarity=0.055 Sum_probs=53.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAA-ARGLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++..++...+.+. ..+ .++.++..|+.+.. +. -
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 456777775 455666666655 7899999999887776665554 333 47999999998742 11 1
Q ss_pred CccceEEccccccC
Q 017428 225 GQFDLVWSMESGEH 238 (371)
Q Consensus 225 ~~fD~v~~~~~l~~ 238 (371)
+..|+++.+..+.+
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 46899988766543
No 447
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=81.69 E-value=8.7 Score=33.09 Aligned_cols=76 Identities=16% Similarity=0.003 Sum_probs=46.4
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCC
Q 017428 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPD 224 (371)
Q Consensus 159 ~~~VLDlG~Gt-G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~ 224 (371)
+++||=.|++. |..+..+++.+ +++|+.++.++...+.+++.....+ +..++..|+.+.. -.-
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56788888652 66666666655 8899999987622222222222222 3467889987742 012
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+..+.
T Consensus 86 g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 86 PKFDGFVHSIGFA 98 (265)
T ss_dssp SSEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689988776543
No 448
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=81.46 E-value=8.9 Score=32.72 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=52.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|+ +|..+..+++.+ +++|++++.++...+...+.+...+ .++.++..|+.+.. +. .+
T Consensus 13 ~k~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 13 NRVAIVTGG-AQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567887774 566666666655 7899999999877766555555444 47899999998742 10 13
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
..|+|+.+...
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876554
No 449
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.28 E-value=14 Score=31.79 Aligned_cols=100 Identities=18% Similarity=0.179 Sum_probs=61.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++..++...+. +..++.++..|+.+.. +. -+
T Consensus 6 ~k~vlITGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGA-ASGIGRAALDLFAREGASLVAVDREERLLAEAVAA-----LEAEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-----CCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hcCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 567887775 455666666555 88999999998766544332 2246889999988742 10 14
Q ss_pred ccceEEccccccCcC-----C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 226 QFDLVWSMESGEHMP-----D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 226 ~fD~v~~~~~l~~~~-----~---~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
..|+++.+..+.... + +. .+.+.+...++.+|.++....
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 137 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGS 137 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 679988776543321 1 11 234445555544788777653
No 450
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.87 E-value=1.1 Score=34.83 Aligned_cols=71 Identities=18% Similarity=0.238 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHHHcCCCCCeEEEEcC-CC--CCCCCCCccceEEcccccc-C-cCCHHHHHHHHHHhcCCCcEEEE
Q 017428 190 SPVQAQRANALAAARGLADKVSFQVGD-AL--QQPFPDGQFDLVWSMESGE-H-MPDKSKFVSELARVTAPAGTIII 261 (371)
Q Consensus 190 s~~~~~~a~~~~~~~~~~~~v~~~~~d-~~--~~~~~~~~fD~v~~~~~l~-~-~~~~~~~l~~~~~~LkpgG~l~i 261 (371)
.|+.++.++....+.+- ..+.....| +. ...++.+.||.|+...--. . ..-+..++..+++.|||||.|..
T Consensus 21 ~pe~le~~k~~~~~~~~-~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASKKV-KFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHTTE-EEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhcccc-chhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 36667777666655210 112333333 11 1236789999998654322 2 22348899999999999999986
No 451
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.82 E-value=9.2 Score=32.97 Aligned_cols=75 Identities=19% Similarity=0.134 Sum_probs=54.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+++||=.|++.| .+..+++.+ |++|+.+|.++..++...+.+...+ .++.++..|+.+.. + .-+
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 678888887655 444444444 8999999999988887777776655 57999999998752 1 124
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
..|+++.+...
T Consensus 88 ~id~lv~nAg~ 98 (264)
T 3ucx_A 88 RVDVVINNAFR 98 (264)
T ss_dssp CCSEEEECCCS
T ss_pred CCcEEEECCCC
Confidence 78998876533
No 452
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.75 E-value=8.1 Score=32.80 Aligned_cols=76 Identities=17% Similarity=0.097 Sum_probs=54.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++...+...+.++..+ .++.++..|+.+.. -..+
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567777774 556666666555 8999999999988887777776655 47999999998742 0124
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 82 ~id~li~~Ag~~ 93 (247)
T 3lyl_A 82 AIDILVNNAGIT 93 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988776543
No 453
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=80.50 E-value=2.1 Score=37.25 Aligned_cols=21 Identities=10% Similarity=0.320 Sum_probs=18.0
Q ss_pred HHHHHHHHHhcCCCcEEEEEe
Q 017428 243 SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 243 ~~~l~~~~~~LkpgG~l~i~~ 263 (371)
...+.+++++|+|||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 567888999999999998863
No 454
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=80.33 E-value=8.5 Score=33.22 Aligned_cols=102 Identities=20% Similarity=0.191 Sum_probs=63.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC---HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS---PVQAQRANALAAARGLADKVSFQVGDALQQP-----F----- 222 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~----- 222 (371)
+++||=.|++ |..+..+++.+ |++|+.++.+ ...++...+.+...+ .++.++..|+.+.. +
T Consensus 11 ~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 11 NKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 6778877755 55666666666 7899998764 334444444444433 57889999998742 1
Q ss_pred CCCccceEEccccccCcC--------CHH-----------HHHHHHHHhcCCCcEEEEEe
Q 017428 223 PDGQFDLVWSMESGEHMP--------DKS-----------KFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 223 ~~~~fD~v~~~~~l~~~~--------~~~-----------~~l~~~~~~LkpgG~l~i~~ 263 (371)
.-+..|+++.+..+.... ++. .+.+.+...|+++|.++++.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 014689988776543221 111 23445556666788887764
No 455
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.14 E-value=13 Score=32.44 Aligned_cols=103 Identities=17% Similarity=0.132 Sum_probs=63.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHH-HHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQ-AQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~-~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++.. .+.+.+.+...+ .++.++..|+.+.. +. -
T Consensus 29 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 29 GKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 566776664 566666666655 8899999887543 344444444433 46889999987642 10 1
Q ss_pred CccceEEccccccCcC-----C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 225 GQFDLVWSMESGEHMP-----D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 225 ~~fD~v~~~~~l~~~~-----~---~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+..|+++.+..+.... + +. .+++.+.+.|+.+|.++.+..
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 4689988776544321 1 11 244566677777788887653
No 456
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=80.09 E-value=5 Score=31.94 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE
Q 017428 135 RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQ 213 (371)
Q Consensus 135 ~~~~~~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 213 (371)
...|+..+........-- ..-|||+|-|+|..-..+.+.+ +..|+.+|-.-..-. ...|+.-.++
T Consensus 23 ltaQR~~L~~a~~~v~~~------~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp--------~~~P~~e~~i 88 (174)
T 3iht_A 23 MVSQRACLEHAIAQTAGL------SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHP--------DSTPPEAQLI 88 (174)
T ss_dssp HHHHHHHHHHHHHHTTTC------CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCG--------GGCCCGGGEE
T ss_pred HHHHHHHHHHHHHHhcCC------CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCC--------CCCCchHhee
Confidence 345556666666665432 4679999999999999999988 788999985321100 1134445567
Q ss_pred EcCCCCC-CC----CCCccceEEccccccCcCCH----HHHHHHHHHhcCCCcEEEEEe
Q 017428 214 VGDALQQ-PF----PDGQFDLVWSMESGEHMPDK----SKFVSELARVTAPAGTIIIVT 263 (371)
Q Consensus 214 ~~d~~~~-~~----~~~~fD~v~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~i~~ 263 (371)
++|+.+. +. -....-++++-...++-..- ..+-.-+..+|.|||.++-..
T Consensus 89 lGdi~~tL~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 89 LGDIRETLPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp ESCHHHHHHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cccHHHHHHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 7776553 21 02333344443333322111 123344567899999887654
No 457
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=80.02 E-value=11 Score=31.53 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=55.6
Q ss_pred EEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCccceEEcc
Q 017428 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVWSM 233 (371)
Q Consensus 161 ~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~v~~~ 233 (371)
+|+=+|+ |.++..+++.+ +..|+++|.+++.++...+. .++.++.+|..+.. ..-..+|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 4666775 66776666655 78999999999877654432 14678999987742 112467888764
Q ss_pred ccccCcCCH--HHHHHHHHHhcCCCcEEEE
Q 017428 234 ESGEHMPDK--SKFVSELARVTAPAGTIII 261 (371)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~~~LkpgG~l~i 261 (371)
. ++. ...+..+.+.+.|...++.
T Consensus 73 ~-----~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 73 T-----PRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp C-----SCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred c-----CCcHHHHHHHHHHHHHcCCCeEEE
Confidence 2 222 3345555555666666655
No 458
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=79.96 E-value=10 Score=33.52 Aligned_cols=76 Identities=20% Similarity=0.100 Sum_probs=55.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+.+||=.|++ |..+..+++.+ |++|+.++.++..++.+.+.+...+ .++.++..|+.+.. +. .+
T Consensus 31 gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 31 GRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 6788888866 45555555554 8999999999998888877776655 47999999998742 00 14
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689998776553
No 459
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=79.85 E-value=9.5 Score=34.15 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=55.0
Q ss_pred CCEEEEECCCc--ChHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccc
Q 017428 159 PKNVVDVGCGI--GGSSRYLAKKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME 234 (371)
Q Consensus 159 ~~~VLDlG~Gt--G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 234 (371)
..+|.=||+|. +.++..+.+. +. +|+++|.+++.++.+.+ .|. +.-...|..+. .-...|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~----~G~---~~~~~~~~~~~--~~~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGI---IDEGTTSIAKV--EDFSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTS---CSEEESCTTGG--GGGCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHH----CCC---cchhcCCHHHH--hhccCCEEEEeC
Confidence 36899999764 2234444443 66 89999999987776553 332 11122333320 124579888754
Q ss_pred cccCcCCHHHHHHHHHHhcCCCcEEEE
Q 017428 235 SGEHMPDKSKFVSELARVTAPAGTIII 261 (371)
Q Consensus 235 ~l~~~~~~~~~l~~~~~~LkpgG~l~i 261 (371)
-.. ....+++++...|+||..++-
T Consensus 103 p~~---~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 103 PVR---TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp CGG---GHHHHHHHHHHHSCTTCEEEE
T ss_pred CHH---HHHHHHHHHhhccCCCcEEEE
Confidence 332 346788899999999876543
No 460
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=79.66 E-value=8.7 Score=32.63 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=52.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.| |+|..+..+++.+ +++|++++.++..++...+.+...+ .++.++.+|+.+.. +. .+
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 56777666 5677777777766 7899999999887766555555443 47889999987742 10 13
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
.+|+|+.+...
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876554
No 461
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=79.46 E-value=5.8 Score=34.08 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=54.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C----CCCc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F----PDGQ 226 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~----~~~~ 226 (371)
+++||=.|++. ..+..+++.+ |++|+.+|.++..++.+.+.+...+ .++.++.+|+.+.. + ..+.
T Consensus 7 ~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 7 NATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp SCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 57788888654 4555555554 8999999999888877777776654 57999999998742 0 0157
Q ss_pred cceEEcccccc
Q 017428 227 FDLVWSMESGE 237 (371)
Q Consensus 227 fD~v~~~~~l~ 237 (371)
.|+++.+..+.
T Consensus 84 id~lv~nAg~~ 94 (252)
T 3h7a_A 84 LEVTIFNVGAN 94 (252)
T ss_dssp EEEEEECCCCC
T ss_pred ceEEEECCCcC
Confidence 89988776553
No 462
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=79.11 E-value=9.5 Score=33.27 Aligned_cols=76 Identities=16% Similarity=0.165 Sum_probs=53.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+++||=.|++ |..+..+++.+ |++|+.++.++..++.+.+.+...+ .++.++..|+.+.. + .-+
T Consensus 24 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 24 PQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp -CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5778888855 45555555554 8999999999988887777666554 57999999998742 1 014
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 101 ~id~lv~nAg~~ 112 (279)
T 3sju_A 101 PIGILVNSAGRN 112 (279)
T ss_dssp SCCEEEECCCCC
T ss_pred CCcEEEECCCCC
Confidence 689988776543
No 463
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.04 E-value=5.7 Score=35.76 Aligned_cols=87 Identities=17% Similarity=0.157 Sum_probs=55.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCH----HHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCc
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSP----VQAQRANALAAARGLADKVSFQVGDALQQP-----FPDGQ 226 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~ 226 (371)
.++||=.| |||..+..+++.+ +.+|++++-++ ......+. +.. .++.++.+|+.+.. +....
T Consensus 10 ~~~IlVtG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-l~~----~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 10 KGRVLIAG-ATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKA-LED----KGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp -CCEEEEC-TTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHH-HHH----TTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHH-HHh----CCcEEEEeecCCHHHHHHHHhhCC
Confidence 35788887 5778777777655 78899998765 33332222 112 46899999997742 22226
Q ss_pred cceEEccccccCcCCHHHHHHHHHH
Q 017428 227 FDLVWSMESGEHMPDKSKFVSELAR 251 (371)
Q Consensus 227 fD~v~~~~~l~~~~~~~~~l~~~~~ 251 (371)
+|+|+......++.....+++.+.+
T Consensus 84 ~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 84 IDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred CCEEEECCchhhHHHHHHHHHHHHH
Confidence 8999987766555555555655554
No 464
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=78.19 E-value=3 Score=36.22 Aligned_cols=101 Identities=18% Similarity=0.132 Sum_probs=63.0
Q ss_pred CCEEEEECC-CcChHHHHHHHHc---CCEEEEEeCCHHH-HHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----
Q 017428 159 PKNVVDVGC-GIGGSSRYLAKKF---GAKCQGITLSPVQ-AQRANALAAARGLADKVSFQVGDALQQP-----FP----- 223 (371)
Q Consensus 159 ~~~VLDlG~-GtG~~~~~l~~~~---~~~v~gvD~s~~~-~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~----- 223 (371)
+++||=.|+ |+|..+..+++.+ +++|+.++.++.. ++...+ .+..++.++..|+.+.. +.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-----RLPAKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-----TSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-----hcCCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 678998898 4777777777665 7899999988643 222221 12346788899987742 10
Q ss_pred CC---ccceEEccccccC--------cC--C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 017428 224 DG---QFDLVWSMESGEH--------MP--D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 224 ~~---~fD~v~~~~~l~~--------~~--~---~~-----------~~l~~~~~~LkpgG~l~i~~~ 264 (371)
-+ ..|+++.+..+.. +. + +. .+.+.+.+.++.+|.++....
T Consensus 82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence 12 7899887665432 11 1 11 234555566667788877653
No 465
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=78.18 E-value=3.5 Score=39.46 Aligned_cols=59 Identities=15% Similarity=0.034 Sum_probs=43.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (371)
...+|+|+-||.|++...+.+. |. .|.++|+++...+.-+.++ +..+...++..|+.++
T Consensus 87 ~~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~---~~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANH---YCDPATHHFNEDIRDI 146 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHS---CCCTTTCEEESCTHHH
T ss_pred ccceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhc---ccCCCcceeccchhhh
Confidence 3578999999999999988765 54 4789999998877666553 1112445677887654
No 466
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=78.11 E-value=6.4 Score=34.24 Aligned_cols=76 Identities=16% Similarity=0.081 Sum_probs=47.9
Q ss_pred CCEEEEECCC-cChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCG-IGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~G-tG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++ +|..+..+++.+ |++|+.++.++...+..++.....+ ++.++..|+.+.. + ..
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6789988875 366666666655 7899999988752222222222222 4778899987742 0 12
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+..+.
T Consensus 83 g~id~lv~nAg~~ 95 (275)
T 2pd4_A 83 GSLDFIVHSVAFA 95 (275)
T ss_dssp SCEEEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 4689988776543
No 467
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=77.97 E-value=14 Score=31.42 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=52.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|++ |..+..+++.+ |++|+.++.++..++...+.+...+ .++.++..|+.+.. +. -+
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5678888854 55666666555 8899999999887776666665544 47889999997742 00 14
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
..|+++.+..+
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876554
No 468
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=77.97 E-value=18 Score=31.46 Aligned_cols=76 Identities=18% Similarity=0.114 Sum_probs=47.6
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~Gt-G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++. |..+..+++.+ |++|+.++.++...+.+++.....+ ++.++.+|+.+.. + .-
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG---SDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57888888752 66666666655 8899999988752222222222222 3678889987742 1 01
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+..+.
T Consensus 98 g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 98 GSLDIIVHSIAYA 110 (285)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689988776543
No 469
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=77.85 E-value=6.2 Score=35.02 Aligned_cols=88 Identities=14% Similarity=0.120 Sum_probs=51.6
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCCCCCCCccceEEcccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV-GDALQQPFPDGQFDLVWSMES 235 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fD~v~~~~~ 235 (371)
++.+|+=||+|. |......+..++.+|+++|.++...+.+.+ .+ +.... .++.+. -...|+|+..-.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g----~~~~~~~~l~~~---l~~aDvVi~~~p 224 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE----MG----LVPFHTDELKEH---VKDIDICINTIP 224 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT----CEEEEGGGHHHH---STTCSEEEECCS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CC----CeEEchhhHHHH---hhCCCEEEECCC
Confidence 478999999864 333333334448899999999865443322 22 33221 122111 145799987765
Q ss_pred ccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 236 GEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 236 l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
.+.+ +. +....+|||+.++-+
T Consensus 225 ~~~i-~~-----~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 225 SMIL-NQ-----TVLSSMTPKTLILDL 245 (300)
T ss_dssp SCCB-CH-----HHHTTSCTTCEEEEC
T ss_pred hhhh-CH-----HHHHhCCCCCEEEEE
Confidence 5333 22 345678999876654
No 470
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=77.54 E-value=28 Score=33.17 Aligned_cols=99 Identities=16% Similarity=0.161 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC
Q 017428 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (371)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 216 (371)
..+..+.+.....- .+.+|+=+|+| ..+..+++.+ |++|+++|.++.....+.. .+ + ...+
T Consensus 250 sl~dgi~r~tg~~L----~GKtVvVtGaG--gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~----~g----~--dv~~ 313 (488)
T 3ond_A 250 SLPDGLMRATDVMI----AGKVAVVAGYG--DVGKGCAAALKQAGARVIVTEIDPICALQATM----EG----L--QVLT 313 (488)
T ss_dssp HHHHHHHHHHCCCC----TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----C--EECC
T ss_pred HHHHHHHHHcCCcc----cCCEEEEECCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----hC----C--ccCC
Confidence 34444444433321 47899999987 4555554443 8999999999876655443 12 2 2233
Q ss_pred CCCCCCCCCccceEEccccccCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 217 ALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 217 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
..+. ...+|+|+....-.++-+ .+..+.+++|+.++-.
T Consensus 314 lee~---~~~aDvVi~atG~~~vl~-----~e~l~~mk~gaiVvNa 351 (488)
T 3ond_A 314 LEDV---VSEADIFVTTTGNKDIIM-----LDHMKKMKNNAIVCNI 351 (488)
T ss_dssp GGGT---TTTCSEEEECSSCSCSBC-----HHHHTTSCTTEEEEES
T ss_pred HHHH---HHhcCEEEeCCCChhhhh-----HHHHHhcCCCeEEEEc
Confidence 3332 245798775433222222 2356778998877654
No 471
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=77.11 E-value=14 Score=32.04 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=52.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|++ |..+..+++.+ |++|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -+
T Consensus 22 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 22 SEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp SCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5678888854 55666666555 7899999999887776666555544 46889999987742 10 14
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 99 ~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 99 PVDVLVNNAGRP 110 (277)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988776543
No 472
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=76.93 E-value=14 Score=31.47 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=53.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++. ..+..+++.+ |++|+.++.++..++.+.+.+...... .++.++..|+.+.. + .-
T Consensus 7 ~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGASQ-GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTTS-HHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 56788888654 4455555444 899999999998888777766554222 46889999998742 1 01
Q ss_pred CccceEEccccc
Q 017428 225 GQFDLVWSMESG 236 (371)
Q Consensus 225 ~~fD~v~~~~~l 236 (371)
+..|+++.+..+
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468998877655
No 473
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=76.86 E-value=13 Score=32.67 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=53.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CC---EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------C--
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GA---KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------F-- 222 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~-- 222 (371)
+++||=.|++ |..+..+++.+ ++ .|+.++.+.+.++.+.+.+.......++.++.+|+.+.. .
T Consensus 33 ~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 6788888865 44555555544 55 999999999888877776665432346889999998752 1
Q ss_pred CCCccceEEcccccc
Q 017428 223 PDGQFDLVWSMESGE 237 (371)
Q Consensus 223 ~~~~fD~v~~~~~l~ 237 (371)
.-+..|+++.+..+.
T Consensus 112 ~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 112 EFKDIDILVNNAGKA 126 (287)
T ss_dssp GGCSCCEEEECCCCC
T ss_pred hcCCCCEEEECCCcC
Confidence 124689998776543
No 474
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=76.65 E-value=12 Score=35.23 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=51.0
Q ss_pred CCEEEEECCCcCh--HHHHHHHHcCCEEEEEeCCHHHHHHHHHH------------HHHcCCCCCeEEEEcCCCCCCCCC
Q 017428 159 PKNVVDVGCGIGG--SSRYLAKKFGAKCQGITLSPVQAQRANAL------------AAARGLADKVSFQVGDALQQPFPD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~--~~~~l~~~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~~~v~~~~~d~~~~~~~~ 224 (371)
+.+.--||.|.=+ .+..+++. |.+|+++|.+++.++..++. +++.-.+.++.+. .|+
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~------- 81 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP------- 81 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC-------
T ss_pred CCccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch-------
Confidence 5566667766422 23333333 78999999999988776541 1100001244443 232
Q ss_pred CccceEEccccccC------cCC---HHHHHHHHHHhcCCCcEEEE
Q 017428 225 GQFDLVWSMESGEH------MPD---KSKFVSELARVTAPAGTIII 261 (371)
Q Consensus 225 ~~fD~v~~~~~l~~------~~~---~~~~l~~~~~~LkpgG~l~i 261 (371)
...|+|+.+-.-.. -+| .....+.+.+.|++|..++.
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~ 127 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV 127 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE
Confidence 23577776432221 112 45667788888998765444
No 475
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=76.58 E-value=15 Score=31.50 Aligned_cols=78 Identities=21% Similarity=0.175 Sum_probs=52.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++..++...+.+.......++.++.+|+.+.. +. -+
T Consensus 13 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 567888885 455666665555 88999999998877766555544311246889999988742 10 13
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 92 ~id~lv~nAg~~ 103 (267)
T 1iy8_A 92 RIDGFFNNAGIE 103 (267)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689988776543
No 476
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=76.47 E-value=13 Score=31.79 Aligned_cols=76 Identities=13% Similarity=0.086 Sum_probs=52.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C-
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D- 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~- 224 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 9 ~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 9 GCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 577887775 556666666555 8899999999887776655555443 46888999987742 10 1
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+..+.
T Consensus 86 g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 86 GKLNILVNNAGIV 98 (260)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5789998776543
No 477
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=76.12 E-value=16 Score=31.57 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=53.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC------C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP------D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~------~ 224 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++..++...+.+...+ .++.++..|+.+.. +. +
T Consensus 21 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 21 GTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 577888885 555666666555 8899999999887776666555544 46889999987742 10 1
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+....
T Consensus 98 g~id~lv~nAg~~ 110 (273)
T 1ae1_A 98 GKLNILVNNAGVV 110 (273)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 6789988776543
No 478
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=75.89 E-value=23 Score=30.69 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=49.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+++||=.|++. ..+..+++.+ |++|+.+|.++..++.+.+.+ + .++.++..|+.+.. + .-+
T Consensus 29 gk~vlVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 29 GKVAIVTGAGA-GIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G--CGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TCEEEETTTTS-THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C--SSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56788777554 4555555544 899999999987766655443 2 46889999998742 0 014
Q ss_pred ccceEEccccccC
Q 017428 226 QFDLVWSMESGEH 238 (371)
Q Consensus 226 ~fD~v~~~~~l~~ 238 (371)
..|+++.+..+.+
T Consensus 103 ~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 103 GVDKLVANAGVVH 115 (277)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899987765543
No 479
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=75.63 E-value=6.6 Score=35.76 Aligned_cols=91 Identities=18% Similarity=0.158 Sum_probs=59.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC------CCC-CCccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ------PFP-DGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~-~~~fD 228 (371)
++.+||=+|+|. |..+..+++.. +++|+++|.+++.++.+++ .|.. .++ |..+. ... ...+|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~v~~~~~g~g~D 256 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGAD---HVV--DARRDPVKQVMELTRGRGVN 256 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCS---EEE--ETTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCCC---EEE--eccchHHHHHHHHhCCCCCc
Confidence 489999999863 66788888888 9999999999988887764 3421 222 22111 011 23699
Q ss_pred eEEccccccCcCCHH-HHHHHHHHhcCCCcEEEEEec
Q 017428 229 LVWSMESGEHMPDKS-KFVSELARVTAPAGTIIIVTW 264 (371)
Q Consensus 229 ~v~~~~~l~~~~~~~-~~l~~~~~~LkpgG~l~i~~~ 264 (371)
+|+-.-. ... ..+..+.+. +||.+++...
T Consensus 257 vvid~~G-----~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 257 VAMDFVG-----SQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp EEEESSC-----CHHHHHHGGGGEE--EEEEEEECCC
T ss_pred EEEECCC-----CchHHHHHHHhhc--CCCEEEEEeC
Confidence 9875422 211 156666666 9999888653
No 480
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=75.63 E-value=14 Score=34.77 Aligned_cols=87 Identities=15% Similarity=0.135 Sum_probs=50.1
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCccceEEccccc
Q 017428 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (371)
Q Consensus 158 ~~~~VLDlG~Gt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 236 (371)
.+.+|.=+|.|. |......++.+|++|+++|.++.....+.. .| ..+ .++.+. -...|+|+....-
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~----~G----~~~--~sL~ea---l~~ADVVilt~gt 276 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM----EG----YQV--LLVEDV---VEEAHIFVTTTGN 276 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHH---TTTCSEEEECSSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH----hC----Cee--cCHHHH---HhhCCEEEECCCC
Confidence 478999999775 444444444558999999999876554432 22 222 233221 1346888764332
Q ss_pred cCcCCHHHHHHHHHHhcCCCcEEEEE
Q 017428 237 EHMPDKSKFVSELARVTAPAGTIIIV 262 (371)
Q Consensus 237 ~~~~~~~~~l~~~~~~LkpgG~l~i~ 262 (371)
.++-+ .+..+.+|||++|+-+
T Consensus 277 ~~iI~-----~e~l~~MK~gAIVINv 297 (436)
T 3h9u_A 277 DDIIT-----SEHFPRMRDDAIVCNI 297 (436)
T ss_dssp SCSBC-----TTTGGGCCTTEEEEEC
T ss_pred cCccC-----HHHHhhcCCCcEEEEe
Confidence 23222 2456678888766543
No 481
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=75.62 E-value=15 Score=31.53 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=51.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|++ |..+..+++.+ |++|+.++.++..++...+.+...+ .++.++..|+.+.. +. -+
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 7 GKVCLVTGAG-GNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5678877754 55666666555 8899999999887776666555443 46889999987742 00 14
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
..|+++.+...
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998877654
No 482
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=75.59 E-value=21 Score=33.10 Aligned_cols=79 Identities=11% Similarity=0.029 Sum_probs=48.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHH---HHHHHHHHHHHc-------CCCCCeEEEEcCCCCCC-C-
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPV---QAQRANALAAAR-------GLADKVSFQVGDALQQP-F- 222 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~---~~~~a~~~~~~~-------~~~~~v~~~~~d~~~~~-~- 222 (371)
+.++||=.| |+|.++..+++.+ +.+|++++-++. ..+...+.+... ....++.++.+|+.+.. +
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 356788777 6788888888776 578999987765 332222222111 01257999999997732 2
Q ss_pred CCCccceEEcccccc
Q 017428 223 PDGQFDLVWSMESGE 237 (371)
Q Consensus 223 ~~~~fD~v~~~~~l~ 237 (371)
....+|+|+.+....
T Consensus 147 ~~~~~d~Vih~A~~~ 161 (427)
T 4f6c_A 147 LPENMDTIIHAGART 161 (427)
T ss_dssp CSSCCSEEEECCCCC
T ss_pred CcCCCCEEEECCccc
Confidence 236789988765543
No 483
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=75.52 E-value=20 Score=31.23 Aligned_cols=75 Identities=16% Similarity=0.098 Sum_probs=49.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCH-HHHHHHHHHHH-HcCCCCCeEEEEcCCCC----CC-----C--
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSP-VQAQRANALAA-ARGLADKVSFQVGDALQ----QP-----F-- 222 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~----~~-----~-- 222 (371)
+++||=.|++ |..+..+++.+ |++|+.++.++ ..++.+.+.+. ..+ .++.++.+|+.+ .. +
T Consensus 23 ~k~~lVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 23 APAAVVTGAA-KRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCEEEETTCS-SHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHHHHHH
Confidence 5677777754 55666665554 89999999987 66655555443 333 478999999987 31 0
Q ss_pred ---CCCccceEEccccc
Q 017428 223 ---PDGQFDLVWSMESG 236 (371)
Q Consensus 223 ---~~~~fD~v~~~~~l 236 (371)
.-+..|+++.+..+
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 01468998877654
No 484
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=75.35 E-value=15 Score=32.24 Aligned_cols=76 Identities=18% Similarity=0.077 Sum_probs=52.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|+ +|..+..+++.+ |++|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -+
T Consensus 34 ~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 34 GKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567888875 456666666655 8899999999887776665555544 46888999988742 11 14
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 111 ~iD~lvnnAg~~ 122 (291)
T 3cxt_A 111 IIDILVNNAGII 122 (291)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCCcC
Confidence 689988776543
No 485
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=75.23 E-value=13 Score=31.93 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=53.0
Q ss_pred CCEEEEECC-CcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGC-GIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~-GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|+ |.|. +..+++.+ +++|+.++.++..++...+.+...+ ..++.++..|+.+.. + ..
T Consensus 22 ~k~vlITGasg~GI-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 22 GKVVLVTAAAGTGI-GSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TCEEEESSCSSSSH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCch-HHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 678888886 4443 33333333 8999999999988877777665543 257999999998742 0 01
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+..+.
T Consensus 100 g~id~li~~Ag~~ 112 (266)
T 3o38_A 100 GRLDVLVNNAGLG 112 (266)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689998876553
No 486
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=75.23 E-value=10 Score=27.55 Aligned_cols=66 Identities=21% Similarity=0.151 Sum_probs=44.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-C--CCCccceEE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-F--PDGQFDLVW 231 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~--~~~~fD~v~ 231 (371)
..+|+=+|+ |..+..+++.+ + .+|+++|.++..++... . .++.+...|+.+.. + .-..+|+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 568999998 66666655544 6 78999999987766544 1 35777888876531 0 013578887
Q ss_pred ccc
Q 017428 232 SME 234 (371)
Q Consensus 232 ~~~ 234 (371)
..-
T Consensus 75 ~~~ 77 (118)
T 3ic5_A 75 SAA 77 (118)
T ss_dssp ECS
T ss_pred ECC
Confidence 654
No 487
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=75.02 E-value=13 Score=32.45 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=52.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+..||=.|++ |..+..+++.+ |++|+.+|.+...++.+.+.+...+ .++.++..|+.+.. + .-+
T Consensus 28 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 28 SPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5678888855 45555555554 8999999999988777766665443 57899999998742 1 014
Q ss_pred ccceEEccccc
Q 017428 226 QFDLVWSMESG 236 (371)
Q Consensus 226 ~fD~v~~~~~l 236 (371)
..|+++.+..+
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78998877654
No 488
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=74.66 E-value=20 Score=31.08 Aligned_cols=76 Identities=14% Similarity=0.043 Sum_probs=45.9
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~Gt-G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++. +..+..+++.+ +++|+.++.+. ..+.+++ +.... .++.++.+|+.+.. + .-
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~-l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEK-LCAEF--NPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHH-HHGGG--CCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHH-HHHhc--CCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 67888888532 23444444444 88999999887 1122222 22222 35889999998742 0 12
Q ss_pred CccceEEccccccC
Q 017428 225 GQFDLVWSMESGEH 238 (371)
Q Consensus 225 ~~fD~v~~~~~l~~ 238 (371)
+..|+++.+..+..
T Consensus 102 g~id~li~nAg~~~ 115 (280)
T 3nrc_A 102 DGLDAIVHSIAFAP 115 (280)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 56899988766543
No 489
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=74.65 E-value=37 Score=29.11 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=49.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCccceE
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FPDGQFDLV 230 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~v 230 (371)
++.+|=-|.+. ..+..+++.+ |++|+.+|.+.. +.+.+.++..+ .++.++..|+.+.. +..+..|++
T Consensus 9 GKvalVTGas~-GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 9 GRKALVTGANT-GLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCEEEEeCcCC-HHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 56666666554 4555555554 899999998753 23334444554 57889999987742 345779998
Q ss_pred EccccccC
Q 017428 231 WSMESGEH 238 (371)
Q Consensus 231 ~~~~~l~~ 238 (371)
+.+..+..
T Consensus 84 VNNAGi~~ 91 (247)
T 4hp8_A 84 VNNAGIIR 91 (247)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 87765433
No 490
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=74.63 E-value=17 Score=31.04 Aligned_cols=76 Identities=18% Similarity=0.116 Sum_probs=51.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCC-----CC-----C
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQP-----FP-----D 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~-----~~-----~ 224 (371)
+++||=.|++ |..+..+++.+ |++|+.++.++..++.+.+.+... + .++.++.+|+.+.. +. -
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 7 GKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5678877754 55666666555 789999999987766655544432 3 46889999998742 10 1
Q ss_pred CccceEEcccccc
Q 017428 225 GQFDLVWSMESGE 237 (371)
Q Consensus 225 ~~fD~v~~~~~l~ 237 (371)
+..|+++.+....
T Consensus 84 g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 84 GGADILVNNAGTG 96 (263)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988776543
No 491
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=74.50 E-value=6.3 Score=35.41 Aligned_cols=78 Identities=17% Similarity=0.029 Sum_probs=48.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC---CCCeEEEEcCCCCCC-C--CCCccce
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGL---ADKVSFQVGDALQQP-F--PDGQFDL 229 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~-~--~~~~fD~ 229 (371)
+++||=.| |+|.++..+++.+ +.+|++++.++.........+....- ..++.++.+|+.+.. + .-..+|+
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 67899887 6788887777766 78999999754321111111111100 047999999997742 0 0136899
Q ss_pred EEcccccc
Q 017428 230 VWSMESGE 237 (371)
Q Consensus 230 v~~~~~l~ 237 (371)
|+......
T Consensus 104 Vih~A~~~ 111 (351)
T 3ruf_A 104 VLHQAALG 111 (351)
T ss_dssp EEECCCCC
T ss_pred EEECCccC
Confidence 88766543
No 492
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=74.48 E-value=31 Score=29.02 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=50.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-CCCccc
Q 017428 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-PDGQFD 228 (371)
Q Consensus 158 ~~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~~~fD 228 (371)
++.+||=.|+ +|..+..+++.+ |++|+.++.++..++...+.+ ..++.+...|+.+.. + ..+..|
T Consensus 13 ~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4678887775 455666666555 889999999988776655443 247889999987742 1 124689
Q ss_pred eEEcccccc
Q 017428 229 LVWSMESGE 237 (371)
Q Consensus 229 ~v~~~~~l~ 237 (371)
+++.+..+.
T Consensus 87 ~li~~Ag~~ 95 (249)
T 3f9i_A 87 ILVCNAGIT 95 (249)
T ss_dssp EEEECCC--
T ss_pred EEEECCCCC
Confidence 988776543
No 493
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=74.35 E-value=19 Score=30.70 Aligned_cols=74 Identities=15% Similarity=0.121 Sum_probs=51.0
Q ss_pred CEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CCc
Q 017428 160 KNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DGQ 226 (371)
Q Consensus 160 ~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~~ 226 (371)
++||=.|+ +|..+..+++.+ +++|+.++.++..++...+.+...+ .++.++..|+.+.. +. -+.
T Consensus 3 k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 3 KVALVTGA-GQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 56777774 455666666655 7899999999887766655555444 46889999988742 10 147
Q ss_pred cceEEccccc
Q 017428 227 FDLVWSMESG 236 (371)
Q Consensus 227 fD~v~~~~~l 236 (371)
.|+++.+...
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8998876654
No 494
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=74.31 E-value=15 Score=31.87 Aligned_cols=77 Identities=18% Similarity=0.214 Sum_probs=53.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|++ |..+..+++.+ |++|+.+|.++..++.+.+.+...+.. .++.++..|+.+.. + ..
T Consensus 11 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 11 DRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 6778888854 55555555554 899999999998887777766654421 26889999998742 0 01
Q ss_pred CccceEEccccc
Q 017428 225 GQFDLVWSMESG 236 (371)
Q Consensus 225 ~~fD~v~~~~~l 236 (371)
+..|+++.+...
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468988876654
No 495
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=74.29 E-value=19 Score=30.94 Aligned_cols=78 Identities=14% Similarity=0.013 Sum_probs=53.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (371)
+++||=.|++. ..+..+++.+ |++|+.+|.++..++.+.+.+....-..++.++..|+.+.. + .-+
T Consensus 8 ~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 8 EAVAVVTGGSS-GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 67788888654 4555555544 89999999999888777776655222235889999998742 0 014
Q ss_pred ccceEEcccccc
Q 017428 226 QFDLVWSMESGE 237 (371)
Q Consensus 226 ~fD~v~~~~~l~ 237 (371)
..|+++.+..+.
T Consensus 87 ~id~lvnnAg~~ 98 (265)
T 3lf2_A 87 CASILVNNAGQG 98 (265)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988776553
No 496
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=74.21 E-value=11 Score=32.94 Aligned_cols=77 Identities=18% Similarity=0.094 Sum_probs=54.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+++||=.|++ |..+..+++.+ |++|+.++.++..++...+.+...+ .++.++..|+.+.. +. -+
T Consensus 32 gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 32 GKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 6788888865 55555555554 8999999999887777777666654 47889999998752 10 14
Q ss_pred ccceEEccccccC
Q 017428 226 QFDLVWSMESGEH 238 (371)
Q Consensus 226 ~fD~v~~~~~l~~ 238 (371)
..|+++.+..+..
T Consensus 109 ~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 109 GIDIAVCNAGIVS 121 (276)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899987765543
No 497
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=73.60 E-value=19 Score=31.45 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=53.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcC---CCCCeEEEEcCCCCCC-----CC----
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARG---LADKVSFQVGDALQQP-----FP---- 223 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~-----~~---- 223 (371)
+.+||=.|+ +|..+..+++.+ +++|+.++.++..++...+.+.... ...++.++.+|+.+.. +.
T Consensus 18 ~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 18 GQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 578888874 566777776655 7899999999887776665554410 1247899999998742 11
Q ss_pred -CCccceEEccccc
Q 017428 224 -DGQFDLVWSMESG 236 (371)
Q Consensus 224 -~~~fD~v~~~~~l 236 (371)
-+.+|+|+.+...
T Consensus 97 ~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 97 TFGKINFLVNNGGG 110 (303)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1368998876654
No 498
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.20 E-value=18 Score=31.29 Aligned_cols=77 Identities=21% Similarity=0.233 Sum_probs=52.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeC-------------CHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-------------SPVQAQRANALAAARGLADKVSFQVGDALQQP- 221 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~-------------s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 221 (371)
+++||=.|++. ..+..+++.+ |++|+.+|. ++..++...+.+...+ .++.++..|+.+..
T Consensus 15 gk~~lVTGas~-gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 15 GRVAFITGAAR-GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDDAA 91 (280)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHH
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHH
Confidence 67788888654 4555555544 899999998 6777776666665544 57899999998742
Q ss_pred ----CC-----CCccceEEccccccC
Q 017428 222 ----FP-----DGQFDLVWSMESGEH 238 (371)
Q Consensus 222 ----~~-----~~~fD~v~~~~~l~~ 238 (371)
+. -+..|+++.+.....
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 10 146899887765543
No 499
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=73.17 E-value=18 Score=31.66 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=51.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCC-----C-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQP-----F-----PD 224 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~-----~-----~~ 224 (371)
+++||=.|+ +|..+..+++.+ |++|++++.++..++...+.+... + .++.++.+|+.+.. + ..
T Consensus 26 ~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 26 GKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 567888875 566666666655 789999999987776555544432 3 47899999998742 0 12
Q ss_pred CccceEEccccc
Q 017428 225 GQFDLVWSMESG 236 (371)
Q Consensus 225 ~~fD~v~~~~~l 236 (371)
+.+|+|+.+...
T Consensus 103 g~id~li~~Ag~ 114 (302)
T 1w6u_A 103 GHPNIVINNAAG 114 (302)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 467998877654
No 500
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=73.04 E-value=13 Score=32.27 Aligned_cols=73 Identities=19% Similarity=0.201 Sum_probs=50.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 017428 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (371)
Q Consensus 159 ~~~VLDlG~GtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (371)
+.+||=.|+ +|..+..+++.+ |.+|++++.++..++...+.+...+. .++.++.+|+.+.. +. .+
T Consensus 28 ~k~vlITGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTGA-SKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 567887774 566666666655 78999999998877766655544432 36889999988742 10 14
Q ss_pred ccceEEcc
Q 017428 226 QFDLVWSM 233 (371)
Q Consensus 226 ~fD~v~~~ 233 (371)
..|+++.+
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 68998866
Done!