Query 017429
Match_columns 371
No_of_seqs 368 out of 1622
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 08:29:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017429.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017429hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.8E-31 4E-36 234.1 23.8 280 37-368 9-290 (394)
2 PRK14995 methyl viologen resis 100.0 2.2E-29 4.8E-34 236.6 26.3 301 40-368 5-339 (495)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.6E-29 5.5E-34 230.9 25.1 297 38-356 5-311 (412)
4 PRK09556 uhpT sugar phosphate 100.0 8.3E-30 1.8E-34 238.1 18.7 292 44-361 32-331 (467)
5 COG2271 UhpC Sugar phosphate p 100.0 1.2E-29 2.7E-34 219.7 17.3 301 37-367 25-334 (448)
6 PRK10406 alpha-ketoglutarate t 100.0 1.7E-28 3.7E-33 227.1 24.4 283 41-362 22-317 (432)
7 TIGR00711 efflux_EmrB drug res 100.0 1.9E-28 4E-33 230.7 24.6 299 42-368 3-335 (485)
8 PRK03545 putative arabinose tr 100.0 2.1E-28 4.5E-33 223.8 24.1 265 41-358 9-275 (390)
9 TIGR00891 2A0112 putative sial 100.0 6.2E-28 1.3E-32 221.8 24.8 301 37-364 8-314 (405)
10 PRK10213 nepI ribonucleoside t 100.0 1.3E-27 2.9E-32 218.2 26.3 265 39-357 18-285 (394)
11 TIGR00710 efflux_Bcr_CflA drug 100.0 5.3E-28 1.2E-32 220.8 23.6 279 41-367 5-285 (385)
12 PRK12307 putative sialic acid 100.0 6.2E-28 1.3E-32 223.4 24.1 289 39-366 16-308 (426)
13 TIGR00893 2A0114 d-galactonate 100.0 3.1E-28 6.8E-33 222.7 21.5 276 52-355 5-282 (399)
14 PRK10133 L-fucose transporter; 100.0 1.2E-27 2.5E-32 221.0 25.2 296 39-366 24-337 (438)
15 TIGR00903 2A0129 major facilit 100.0 6.1E-28 1.3E-32 217.5 22.5 245 56-352 6-251 (368)
16 PRK11663 regulatory protein Uh 100.0 6.1E-28 1.3E-32 223.4 22.9 281 41-351 23-306 (434)
17 TIGR00900 2A0121 H+ Antiporter 100.0 7.7E-28 1.7E-32 217.9 20.9 280 46-367 4-290 (365)
18 PRK10091 MFS transport protein 100.0 1.1E-27 2.4E-32 218.3 21.9 273 42-367 4-278 (382)
19 TIGR01299 synapt_SV2 synaptic 100.0 2.1E-27 4.5E-32 228.0 24.5 189 45-246 171-364 (742)
20 TIGR00886 2A0108 nitrite extru 100.0 1.1E-27 2.5E-32 217.1 21.6 294 43-366 3-303 (366)
21 PRK11551 putative 3-hydroxyphe 100.0 2.6E-27 5.6E-32 217.8 24.1 282 38-367 12-298 (406)
22 PRK10504 putative transporter; 100.0 6.2E-27 1.3E-31 219.4 26.5 299 40-367 9-340 (471)
23 PLN00028 nitrate transmembrane 100.0 4.2E-27 9.1E-32 219.9 25.3 284 40-354 35-318 (476)
24 PRK15403 multidrug efflux syst 100.0 2.9E-27 6.4E-32 217.2 23.8 264 45-354 20-285 (413)
25 PRK15402 multidrug efflux syst 100.0 3.7E-27 8E-32 216.7 24.4 276 45-367 17-294 (406)
26 PRK10642 proline/glycine betai 100.0 2.5E-27 5.5E-32 222.5 23.7 298 41-363 16-325 (490)
27 PRK09705 cynX putative cyanate 100.0 6.3E-27 1.4E-31 213.9 25.6 258 58-368 26-284 (393)
28 PF07690 MFS_1: Major Facilita 100.0 1.4E-27 3E-32 215.2 20.4 278 47-365 2-284 (352)
29 TIGR00881 2A0104 phosphoglycer 100.0 1E-27 2.2E-32 218.1 18.5 274 50-352 4-280 (379)
30 TIGR00890 2A0111 Oxalate/Forma 100.0 4.5E-27 9.8E-32 213.8 22.5 264 57-368 19-284 (377)
31 PRK03699 putative transporter; 100.0 1.2E-26 2.6E-31 212.3 24.9 277 40-366 6-283 (394)
32 PRK15034 nitrate/nitrite trans 100.0 1.6E-26 3.6E-31 210.0 24.8 287 39-367 32-329 (462)
33 KOG2615 Permease of the major 100.0 1.4E-27 3E-32 203.4 16.2 277 57-348 41-322 (451)
34 PRK03633 putative MFS family t 100.0 4.5E-26 9.8E-31 207.6 25.6 272 41-367 6-278 (381)
35 PRK10473 multidrug efflux syst 100.0 2.7E-26 5.9E-31 210.0 24.1 275 45-368 7-283 (392)
36 PRK10077 xylE D-xylose transpo 100.0 4.3E-26 9.3E-31 214.3 25.8 307 40-368 11-350 (479)
37 PRK11102 bicyclomycin/multidru 100.0 1.2E-26 2.5E-31 211.4 21.1 263 55-363 5-269 (377)
38 PRK11195 lysophospholipid tran 100.0 1.4E-26 2.9E-31 211.5 21.4 274 42-361 4-278 (393)
39 TIGR00805 oat sodium-independe 100.0 1.9E-27 4.1E-32 227.5 16.1 308 45-367 37-412 (633)
40 PRK15075 citrate-proton sympor 100.0 4E-26 8.6E-31 211.4 24.5 283 40-362 14-312 (434)
41 TIGR00879 SP MFS transporter, 99.9 1E-26 2.2E-31 218.2 20.2 294 46-368 33-363 (481)
42 PRK09952 shikimate transporter 99.9 4.2E-26 9E-31 211.3 23.6 291 41-364 22-326 (438)
43 COG2223 NarK Nitrate/nitrite t 99.9 8.7E-27 1.9E-31 202.4 17.1 285 37-368 10-298 (417)
44 TIGR00894 2A0114euk Na(+)-depe 99.9 2.1E-26 4.6E-31 215.3 21.2 284 39-354 17-327 (465)
45 TIGR00887 2A0109 phosphate:H+ 99.9 1.7E-26 3.6E-31 217.7 20.2 199 40-244 15-232 (502)
46 PRK11043 putative transporter; 99.9 1.9E-25 4.1E-30 205.1 25.6 266 45-362 10-276 (401)
47 PRK03893 putative sialic acid 99.9 2.2E-25 4.7E-30 210.4 25.3 300 38-365 17-352 (496)
48 TIGR00895 2A0115 benzoate tran 99.9 8.5E-26 1.8E-30 207.0 21.0 292 40-360 16-321 (398)
49 TIGR00897 2A0118 polyol permea 99.9 3.5E-25 7.7E-30 203.1 24.6 273 41-358 13-291 (402)
50 TIGR00885 fucP L-fucose:H+ sym 99.9 5.4E-25 1.2E-29 201.5 25.2 295 42-367 4-312 (410)
51 PRK11652 emrD multidrug resist 99.9 3.5E-25 7.5E-30 202.9 23.6 266 39-354 6-273 (394)
52 KOG1330 Sugar transporter/spin 99.9 7.6E-27 1.6E-31 204.4 11.6 283 34-351 26-310 (493)
53 PRK11273 glpT sn-glycerol-3-ph 99.9 1.9E-25 4E-30 208.0 21.2 276 49-355 37-322 (452)
54 KOG0569 Permease of the major 99.9 3.1E-25 6.8E-30 200.7 21.8 285 68-369 46-350 (485)
55 TIGR00892 2A0113 monocarboxyla 99.9 1.6E-24 3.4E-29 201.5 25.7 282 39-350 17-302 (455)
56 TIGR00712 glpT glycerol-3-phos 99.9 2.6E-25 5.6E-30 206.3 20.4 283 42-354 28-317 (438)
57 PRK05122 major facilitator sup 99.9 1E-24 2.2E-29 200.1 24.2 270 39-367 13-292 (399)
58 TIGR00899 2A0120 sugar efflux 99.9 1.4E-24 3.1E-29 197.4 24.4 267 48-365 4-276 (375)
59 PRK12382 putative transporter; 99.9 1.7E-24 3.6E-29 198.2 24.1 269 41-368 15-293 (392)
60 PRK09874 drug efflux system pr 99.9 3E-24 6.5E-29 197.6 25.4 286 41-367 14-301 (408)
61 TIGR00896 CynX cyanate transpo 99.9 2.5E-24 5.5E-29 194.4 23.7 262 54-367 13-276 (355)
62 KOG2533 Permease of the major 99.9 6.2E-25 1.3E-29 201.4 19.6 277 62-361 67-350 (495)
63 PRK10054 putative transporter; 99.9 1.1E-24 2.3E-29 199.1 21.2 278 41-367 7-287 (395)
64 PRK10489 enterobactin exporter 99.9 5.8E-25 1.2E-29 202.9 18.6 276 45-367 21-302 (417)
65 TIGR00898 2A0119 cation transp 99.9 7.5E-25 1.6E-29 207.1 19.0 272 62-368 110-399 (505)
66 PRK11646 multidrug resistance 99.9 5.4E-24 1.2E-28 194.9 23.9 270 46-367 15-287 (400)
67 TIGR00902 2A0127 phenyl propri 99.9 1.1E-23 2.4E-28 191.9 24.5 274 45-368 8-284 (382)
68 KOG2532 Permease of the major 99.9 3.4E-24 7.5E-29 196.1 20.4 253 68-353 65-323 (466)
69 KOG0254 Predicted transporter 99.9 8.2E-24 1.8E-28 199.6 22.7 304 47-369 51-374 (513)
70 cd06174 MFS The Major Facilita 99.9 1.8E-23 3.8E-28 188.2 23.4 252 45-368 3-256 (352)
71 PRK11128 putative 3-phenylprop 99.9 2.3E-23 5E-28 189.9 23.1 267 50-368 13-284 (382)
72 TIGR00883 2A0106 metabolite-pr 99.9 1.5E-23 3.2E-28 191.8 21.2 269 53-360 5-291 (394)
73 PRK11010 ampG muropeptide tran 99.9 5.6E-23 1.2E-27 192.5 25.2 277 40-363 11-298 (491)
74 TIGR00901 2A0125 AmpG-related 99.9 5.2E-23 1.1E-27 185.9 23.8 271 56-367 3-288 (356)
75 PRK11902 ampG muropeptide tran 99.9 6.3E-23 1.4E-27 188.3 24.4 271 47-364 5-286 (402)
76 PRK15011 sugar efflux transpor 99.9 1.3E-21 2.8E-26 179.0 27.0 266 44-363 18-291 (393)
77 KOG3764 Vesicular amine transp 99.9 3.9E-24 8.6E-29 183.5 8.9 240 84-367 108-351 (464)
78 TIGR00882 2A0105 oligosacchari 99.9 7.5E-22 1.6E-26 180.9 23.6 284 42-367 3-297 (396)
79 COG0738 FucP Fucose permease [ 99.9 1.1E-21 2.3E-26 169.8 22.8 291 39-363 11-311 (422)
80 PRK08633 2-acyl-glycerophospho 99.9 2E-22 4.3E-27 208.5 20.2 299 41-368 9-313 (1146)
81 PF05977 MFS_3: Transmembrane 99.9 1.6E-21 3.4E-26 181.7 21.0 286 38-368 7-298 (524)
82 PRK06814 acylglycerophosphoeth 99.9 1E-21 2.2E-26 202.7 21.9 239 84-359 54-296 (1140)
83 PRK09528 lacY galactoside perm 99.9 3.6E-21 7.7E-26 177.8 20.8 286 41-367 10-305 (420)
84 PRK10207 dipeptide/tripeptide 99.9 1.1E-20 2.3E-25 176.5 23.5 176 40-237 13-194 (489)
85 PF06609 TRI12: Fungal trichot 99.9 3.9E-20 8.4E-25 172.0 26.1 285 53-366 56-392 (599)
86 TIGR00924 yjdL_sub1_fam amino 99.9 3.3E-20 7.2E-25 173.0 23.0 175 41-237 10-192 (475)
87 TIGR00889 2A0110 nucleoside tr 99.9 3.8E-20 8.2E-25 170.3 23.1 276 45-367 6-294 (418)
88 KOG2504 Monocarboxylate transp 99.9 7.8E-20 1.7E-24 169.6 23.2 291 37-357 42-366 (509)
89 TIGR02718 sider_RhtX_FptX side 99.9 1.7E-19 3.6E-24 165.0 24.7 273 43-364 3-284 (390)
90 TIGR00806 rfc RFC reduced fola 99.9 1.9E-19 4E-24 161.3 23.8 177 45-241 31-207 (511)
91 PF00083 Sugar_tr: Sugar (and 99.9 1.3E-24 2.9E-29 202.6 -10.8 301 50-369 9-331 (451)
92 KOG0255 Synaptic vesicle trans 99.8 2.1E-19 4.6E-24 170.5 19.9 267 68-369 110-395 (521)
93 TIGR00792 gph sugar (Glycoside 99.8 4.3E-20 9.3E-25 171.6 14.7 271 58-368 16-301 (437)
94 KOG0253 Synaptic vesicle trans 99.8 3.8E-19 8.2E-24 151.4 17.8 305 40-369 77-426 (528)
95 COG2807 CynX Cyanate permease 99.8 7.5E-18 1.6E-22 143.9 24.8 260 55-367 26-287 (395)
96 KOG0252 Inorganic phosphate tr 99.8 1.1E-20 2.3E-25 165.5 6.9 317 42-368 42-392 (538)
97 KOG2325 Predicted transporter/ 99.8 2.2E-17 4.9E-22 148.8 21.8 203 34-246 27-239 (488)
98 PRK09584 tppB putative tripept 99.8 1.3E-17 2.8E-22 156.6 20.7 166 41-228 21-192 (500)
99 PF03825 Nuc_H_symport: Nucleo 99.8 2.8E-16 6E-21 142.5 24.6 276 46-366 7-285 (400)
100 TIGR01301 GPH_sucrose GPH fami 99.8 6.1E-17 1.3E-21 148.7 19.7 305 40-368 3-350 (477)
101 PTZ00207 hypothetical protein; 99.8 1.2E-16 2.6E-21 149.7 21.5 129 58-194 44-180 (591)
102 TIGR00788 fbt folate/biopterin 99.7 7.7E-17 1.7E-21 150.1 17.8 296 39-368 24-332 (468)
103 PRK10429 melibiose:sodium symp 99.7 8.7E-17 1.9E-21 150.6 16.9 282 46-365 11-307 (473)
104 PRK09669 putative symporter Ya 99.7 1.6E-16 3.5E-21 147.8 17.7 284 39-365 7-305 (444)
105 PRK15462 dipeptide/tripeptide 99.7 1.6E-15 3.5E-20 139.9 23.8 170 41-232 9-184 (493)
106 PF13347 MFS_2: MFS/sugar tran 99.7 1.3E-16 2.8E-21 147.7 12.4 266 63-369 24-305 (428)
107 PF03137 OATP: Organic Anion T 99.7 2E-18 4.4E-23 161.5 -0.3 312 45-368 7-388 (539)
108 PRK09848 glucuronide transport 99.7 3.6E-15 7.8E-20 138.9 19.8 282 39-368 6-308 (448)
109 KOG3626 Organic anion transpor 99.7 3.3E-16 7.2E-21 146.9 12.3 310 45-366 101-473 (735)
110 PRK10642 proline/glycine betai 99.7 2.3E-15 5E-20 141.7 18.0 174 51-245 260-438 (490)
111 PF01306 LacY_symp: LacY proto 99.7 3.6E-15 7.9E-20 133.0 18.1 284 41-366 7-301 (412)
112 TIGR01299 synapt_SV2 synaptic 99.7 1.8E-15 3.9E-20 146.1 16.9 141 85-242 598-739 (742)
113 TIGR00889 2A0110 nucleoside tr 99.6 3E-15 6.5E-20 137.9 15.1 175 59-243 226-409 (418)
114 TIGR01272 gluP glucose/galacto 99.6 9.4E-15 2E-19 128.8 17.2 213 130-367 5-221 (310)
115 PRK15011 sugar efflux transpor 99.6 1.6E-14 3.5E-19 132.3 18.0 157 59-238 234-392 (393)
116 KOG2563 Permease of the major 99.6 1.2E-13 2.5E-18 121.8 22.2 277 40-355 44-332 (480)
117 KOG4686 Predicted sugar transp 99.6 1.4E-16 3.1E-21 131.2 3.1 285 45-362 48-338 (459)
118 PF05631 DUF791: Protein of un 99.6 9.8E-14 2.1E-18 120.0 20.6 268 53-366 46-321 (354)
119 PRK11462 putative transporter; 99.6 4.4E-14 9.5E-19 131.6 20.1 277 40-360 8-299 (460)
120 KOG2816 Predicted transporter 99.6 4.1E-14 9E-19 129.5 19.0 291 45-367 26-321 (463)
121 COG2211 MelB Na+/melibiose sym 99.6 3.2E-14 6.9E-19 128.3 17.4 295 37-369 8-317 (467)
122 PRK11551 putative 3-hydroxyphe 99.6 1.8E-14 3.9E-19 132.6 16.0 135 55-195 234-369 (406)
123 TIGR00880 2_A_01_02 Multidrug 99.6 7.4E-15 1.6E-19 113.7 11.1 135 88-238 4-140 (141)
124 PRK05122 major facilitator sup 99.6 3.4E-14 7.3E-19 130.5 17.2 161 57-241 232-393 (399)
125 TIGR00890 2A0111 Oxalate/Forma 99.6 1.7E-14 3.8E-19 131.0 14.5 156 51-228 215-373 (377)
126 TIGR00902 2A0127 phenyl propri 99.6 7.1E-14 1.5E-18 127.5 16.9 148 41-195 205-354 (382)
127 PRK09528 lacY galactoside perm 99.6 1.5E-14 3.3E-19 133.7 11.2 139 84-238 264-405 (420)
128 cd06174 MFS The Major Facilita 99.6 1.2E-13 2.5E-18 124.2 16.4 163 51-235 185-350 (352)
129 TIGR00899 2A0120 sugar efflux 99.6 1.6E-13 3.4E-18 124.9 17.2 154 62-238 220-375 (375)
130 PRK10489 enterobactin exporter 99.5 1.3E-13 2.9E-18 127.3 15.5 163 60-244 242-407 (417)
131 TIGR00892 2A0113 monocarboxyla 99.5 5.9E-14 1.3E-18 130.8 12.8 148 42-195 242-394 (455)
132 PRK12382 putative transporter; 99.5 2.9E-13 6.4E-18 124.0 16.6 156 55-234 230-386 (392)
133 PRK09874 drug efflux system pr 99.5 2E-13 4.4E-18 125.7 15.4 159 58-234 236-395 (408)
134 PRK09705 cynX putative cyanate 99.5 7E-13 1.5E-17 121.4 18.7 178 43-243 207-388 (393)
135 TIGR00897 2A0118 polyol permea 99.5 3.2E-13 6.9E-18 124.1 16.2 171 43-236 224-400 (402)
136 COG3104 PTR2 Dipeptide/tripept 99.5 1.7E-12 3.7E-17 116.4 20.1 176 41-238 21-207 (498)
137 PRK03633 putative MFS family t 99.5 4.6E-13 9.9E-18 122.2 16.8 154 58-236 217-371 (381)
138 PF03209 PUCC: PUCC protein; 99.5 1.7E-12 3.6E-17 114.2 19.1 261 66-369 5-290 (403)
139 TIGR00893 2A0114 d-galactonate 99.5 4.7E-13 1E-17 122.3 16.3 169 41-232 215-394 (399)
140 PF11700 ATG22: Vacuole efflux 99.5 5.2E-12 1.1E-16 117.0 22.9 258 81-364 69-359 (477)
141 PRK03893 putative sialic acid 99.5 7E-13 1.5E-17 125.3 17.2 130 60-195 294-427 (496)
142 PRK03545 putative arabinose tr 99.5 9E-13 1.9E-17 120.7 17.3 149 62-234 226-377 (390)
143 PRK03699 putative transporter; 99.5 5.4E-13 1.2E-17 122.2 15.5 174 43-239 207-382 (394)
144 PRK09952 shikimate transporter 99.5 9E-13 2E-17 122.4 15.9 166 54-239 263-435 (438)
145 TIGR00879 SP MFS transporter, 99.5 1.4E-12 3.1E-17 122.3 16.7 174 45-240 288-474 (481)
146 TIGR00883 2A0106 metabolite-pr 99.5 4E-13 8.6E-18 122.9 11.6 147 43-195 221-374 (394)
147 PRK09556 uhpT sugar phosphate 99.5 1.9E-12 4.1E-17 121.3 16.1 182 42-234 259-446 (467)
148 TIGR00887 2A0109 phosphate:H+ 99.5 1.5E-12 3.4E-17 123.0 15.0 182 55-242 302-494 (502)
149 PRK11128 putative 3-phenylprop 99.4 4E-12 8.6E-17 116.0 16.9 146 43-195 207-354 (382)
150 KOG0569 Permease of the major 99.4 5.4E-12 1.2E-16 115.1 17.2 174 49-244 278-462 (485)
151 PRK12307 putative sialic acid 99.4 3.5E-12 7.7E-17 118.2 15.3 130 60-195 250-382 (426)
152 COG2814 AraJ Arabinose efflux 99.4 9.1E-12 2E-16 110.3 16.9 174 39-236 209-385 (394)
153 PRK11663 regulatory protein Uh 99.4 5.8E-12 1.3E-16 116.9 16.3 168 43-233 245-420 (434)
154 PRK11273 glpT sn-glycerol-3-ph 99.4 3.5E-12 7.7E-17 119.0 14.6 171 43-235 255-433 (452)
155 TIGR00895 2A0115 benzoate tran 99.4 1.9E-12 4.1E-17 118.6 12.6 142 46-193 255-397 (398)
156 COG2270 Permeases of the major 99.4 8.1E-11 1.8E-15 103.5 20.5 267 80-367 56-331 (438)
157 PF11700 ATG22: Vacuole efflux 99.4 1.7E-11 3.8E-16 113.5 16.6 180 41-241 281-472 (477)
158 PRK10504 putative transporter; 99.4 1E-11 2.2E-16 116.6 15.2 147 43-195 263-414 (471)
159 TIGR00891 2A0112 putative sial 99.4 4E-12 8.7E-17 116.8 11.9 129 61-195 258-389 (405)
160 TIGR00900 2A0121 H+ Antiporter 99.4 3.7E-12 8.1E-17 115.2 11.2 128 62-195 232-362 (365)
161 PF05977 MFS_3: Transmembrane 99.4 2.3E-11 5.1E-16 113.9 16.6 156 54-231 231-388 (524)
162 PRK10077 xylE D-xylose transpo 99.4 3.2E-11 6.8E-16 113.6 16.8 170 56-241 286-462 (479)
163 TIGR00882 2A0105 oligosacchari 99.3 1.6E-11 3.4E-16 112.7 13.9 132 84-231 256-389 (396)
164 TIGR00898 2A0119 cation transp 99.3 8.1E-12 1.8E-16 118.4 12.3 137 88-242 361-500 (505)
165 PRK15075 citrate-proton sympor 99.3 3.4E-11 7.4E-16 111.8 15.1 137 53-195 250-393 (434)
166 TIGR02718 sider_RhtX_FptX side 99.3 2.3E-11 5.1E-16 111.3 13.6 160 50-231 217-385 (390)
167 COG2271 UhpC Sugar phosphate p 99.3 3.7E-11 8E-16 105.5 13.5 149 41-195 252-408 (448)
168 TIGR00712 glpT glycerol-3-phos 99.3 6E-11 1.3E-15 110.3 15.8 176 43-240 253-437 (438)
169 TIGR00792 gph sugar (Glycoside 99.3 1.1E-11 2.4E-16 115.2 10.5 112 84-195 259-379 (437)
170 PRK10406 alpha-ketoglutarate t 99.3 9.7E-11 2.1E-15 108.7 16.4 163 54-238 256-425 (432)
171 PRK15402 multidrug efflux syst 99.3 7.6E-11 1.6E-15 108.5 15.6 127 62-195 236-369 (406)
172 PRK11010 ampG muropeptide tran 99.3 6.8E-10 1.5E-14 104.5 21.9 153 65-239 247-405 (491)
173 PLN00028 nitrate transmembrane 99.3 4.1E-11 8.9E-16 112.4 13.4 155 60-238 271-434 (476)
174 PRK10213 nepI ribonucleoside t 99.3 2E-10 4.4E-15 105.1 17.4 125 64-195 240-365 (394)
175 TIGR00881 2A0104 phosphoglycer 99.3 3.5E-11 7.7E-16 109.4 12.3 147 43-195 218-371 (379)
176 KOG2504 Monocarboxylate transp 99.3 5.2E-11 1.1E-15 111.1 13.1 174 43-237 300-476 (509)
177 PF03825 Nuc_H_symport: Nucleo 99.3 1.3E-10 2.8E-15 105.7 15.2 183 41-239 207-398 (400)
178 TIGR00896 CynX cyanate transpo 99.3 1.6E-10 3.5E-15 104.4 15.5 140 50-196 206-348 (355)
179 KOG0253 Synaptic vesicle trans 99.2 3E-11 6.4E-16 103.9 9.0 133 91-241 390-524 (528)
180 PRK10054 putative transporter; 99.2 8.7E-11 1.9E-15 107.6 12.7 111 84-195 246-358 (395)
181 COG2270 Permeases of the major 99.2 1.6E-10 3.6E-15 101.6 13.5 154 65-239 276-431 (438)
182 TIGR01272 gluP glucose/galacto 99.2 3.9E-10 8.5E-15 99.5 15.1 146 41-195 140-289 (310)
183 PRK10091 MFS transport protein 99.2 4.3E-10 9.3E-15 102.7 15.7 123 65-195 224-349 (382)
184 KOG0637 Sucrose transporter an 99.2 2.1E-10 4.6E-15 101.5 12.8 147 41-193 32-202 (498)
185 KOG4686 Predicted sugar transp 99.2 5.4E-10 1.2E-14 92.9 13.6 124 66-197 290-415 (459)
186 PRK11646 multidrug resistance 99.2 2.2E-10 4.8E-15 105.1 12.7 130 61-196 228-359 (400)
187 PF06813 Nodulin-like: Nodulin 99.2 1.9E-09 4.1E-14 90.5 16.6 134 54-195 15-156 (250)
188 TIGR00894 2A0114euk Na(+)-depe 99.2 4.6E-10 1E-14 105.2 14.2 177 41-237 261-450 (465)
189 PRK11902 ampG muropeptide tran 99.2 3.7E-10 8.1E-15 103.8 13.2 149 65-239 234-392 (402)
190 TIGR02332 HpaX 4-hydroxyphenyl 99.2 3.9E-10 8.4E-15 103.9 13.1 147 43-195 244-394 (412)
191 PF03092 BT1: BT1 family; Int 99.2 1.2E-09 2.6E-14 100.8 15.5 274 61-366 10-297 (433)
192 PF01306 LacY_symp: LacY proto 99.2 1.2E-09 2.6E-14 98.0 14.9 143 83-241 260-405 (412)
193 COG2223 NarK Nitrate/nitrite t 99.1 4.5E-10 9.7E-15 98.8 11.3 172 40-233 217-397 (417)
194 TIGR00711 efflux_EmrB drug res 99.1 4.8E-10 1E-14 105.7 11.9 143 47-195 261-409 (485)
195 TIGR00901 2A0125 AmpG-related 99.1 6.8E-10 1.5E-14 100.3 12.3 132 43-180 211-355 (356)
196 PRK10473 multidrug efflux syst 99.1 2E-09 4.4E-14 98.6 15.2 120 66-195 229-348 (392)
197 PRK08633 2-acyl-glycerophospho 99.1 1.3E-09 2.9E-14 113.5 15.7 130 60-195 251-383 (1146)
198 TIGR00710 efflux_Bcr_CflA drug 99.1 1.8E-09 3.8E-14 98.6 14.1 123 61-190 226-356 (385)
199 PF13347 MFS_2: MFS/sugar tran 99.1 3.6E-09 7.8E-14 98.1 16.3 149 41-195 225-383 (428)
200 PF07690 MFS_1: Major Facilita 99.1 3.5E-10 7.5E-15 101.8 9.2 132 50-187 215-352 (352)
201 PF01770 Folate_carrier: Reduc 99.1 6.9E-08 1.5E-12 86.4 22.8 178 43-241 7-186 (412)
202 TIGR00903 2A0129 major facilit 99.1 4.8E-09 1E-13 94.9 15.9 144 41-194 192-340 (368)
203 PRK14995 methyl viologen resis 99.1 1.5E-09 3.2E-14 102.5 12.9 141 49-195 267-412 (495)
204 PRK11043 putative transporter; 99.1 4.5E-09 9.7E-14 96.6 15.0 128 61-195 223-356 (401)
205 PRK11195 lysophospholipid tran 99.0 1E-08 2.2E-13 94.0 16.6 122 66-194 231-354 (393)
206 PRK06814 acylglycerophosphoeth 99.0 2.5E-09 5.3E-14 111.3 14.1 144 46-195 230-395 (1140)
207 PRK15034 nitrate/nitrite trans 99.0 7.6E-09 1.6E-13 95.0 15.3 147 42-195 253-427 (462)
208 PRK10133 L-fucose transporter; 99.0 4.3E-09 9.4E-14 97.6 13.7 125 62-195 279-406 (438)
209 PRK09848 glucuronide transport 99.0 1.1E-09 2.4E-14 102.2 9.8 147 43-195 230-387 (448)
210 PRK10429 melibiose:sodium symp 99.0 2.7E-09 5.8E-14 100.2 12.2 149 41-195 231-392 (473)
211 TIGR00926 2A1704 Peptide:H+ sy 99.0 1.9E-07 4.2E-12 89.8 23.2 159 60-233 7-178 (654)
212 PRK09669 putative symporter Ya 98.9 5.1E-09 1.1E-13 97.6 10.6 112 84-195 266-387 (444)
213 PRK11102 bicyclomycin/multidru 98.9 3E-08 6.5E-13 90.3 15.1 123 62-191 215-344 (377)
214 KOG2532 Permease of the major 98.9 1.4E-08 3E-13 93.9 11.2 173 43-236 260-446 (466)
215 KOG3762 Predicted transporter 98.9 8.1E-09 1.8E-13 93.4 8.6 142 48-195 378-521 (618)
216 TIGR00788 fbt folate/biopterin 98.9 1.1E-08 2.4E-13 95.7 9.5 156 69-238 281-447 (468)
217 COG2807 CynX Cyanate permease 98.8 2.5E-07 5.3E-12 80.2 16.4 149 42-197 209-360 (395)
218 COG0477 ProP Permeases of the 98.8 1.5E-07 3.2E-12 82.7 15.8 140 50-195 11-157 (338)
219 PF00083 Sugar_tr: Sugar (and 98.8 2.5E-11 5.4E-16 113.4 -9.7 165 56-244 268-444 (451)
220 TIGR00885 fucP L-fucose:H+ sym 98.8 8.5E-08 1.8E-12 88.3 13.7 141 46-195 237-380 (410)
221 TIGR00886 2A0108 nitrite extru 98.8 1.7E-08 3.8E-13 91.4 8.7 118 58-182 242-365 (366)
222 KOG0252 Inorganic phosphate tr 98.8 2.7E-09 5.9E-14 94.7 2.9 195 41-246 304-507 (538)
223 PRK11652 emrD multidrug resist 98.8 1.4E-07 3E-12 86.6 14.4 125 64-195 230-359 (394)
224 PRK11462 putative transporter; 98.8 6.3E-08 1.4E-12 90.5 11.8 112 84-195 265-386 (460)
225 TIGR00769 AAA ADP/ATP carrier 98.8 3.2E-06 7E-11 78.0 21.8 288 40-359 6-338 (472)
226 TIGR00924 yjdL_sub1_fam amino 98.7 3.3E-07 7.2E-12 86.0 15.6 112 84-195 314-442 (475)
227 COG2211 MelB Na+/melibiose sym 98.7 1.2E-07 2.6E-12 86.3 12.0 148 42-195 237-395 (467)
228 PF06963 FPN1: Ferroportin1 (F 98.7 6.2E-06 1.3E-10 75.2 22.7 294 44-367 5-336 (432)
229 KOG3764 Vesicular amine transp 98.7 7.6E-08 1.6E-12 84.2 8.0 157 52-230 281-447 (464)
230 KOG0254 Predicted transporter 98.6 9.6E-07 2.1E-11 83.9 15.6 181 42-244 296-491 (513)
231 COG0738 FucP Fucose permease [ 98.6 6.7E-07 1.4E-11 78.7 12.9 147 40-195 235-383 (422)
232 PF05978 UNC-93: Ion channel r 98.6 1.1E-06 2.4E-11 68.3 12.8 106 88-194 43-149 (156)
233 PF03209 PUCC: PUCC protein; 98.6 1.3E-06 2.7E-11 77.6 14.2 170 53-234 220-395 (403)
234 PF06779 DUF1228: Protein of u 98.6 1.8E-07 3.9E-12 63.8 6.4 80 53-138 4-83 (85)
235 KOG3098 Uncharacterized conser 98.6 2.9E-06 6.2E-11 77.4 16.0 107 88-195 56-163 (461)
236 PRK09584 tppB putative tripept 98.5 2.4E-06 5.1E-11 80.8 15.0 108 84-191 318-439 (500)
237 TIGR01301 GPH_sucrose GPH fami 98.5 4.6E-06 1E-10 77.4 15.9 185 42-240 259-475 (477)
238 PRK15403 multidrug efflux syst 98.5 1.9E-06 4.1E-11 79.6 13.1 147 42-195 219-372 (413)
239 PF12832 MFS_1_like: MFS_1 lik 98.5 5.4E-07 1.2E-11 61.0 6.3 70 46-121 5-74 (77)
240 PRK10207 dipeptide/tripeptide 98.4 4.6E-06 1E-10 78.5 13.1 111 84-194 311-439 (489)
241 KOG2533 Permease of the major 98.3 1.6E-06 3.5E-11 80.6 7.6 142 42-189 274-423 (495)
242 PTZ00207 hypothetical protein; 98.3 1.1E-05 2.5E-10 76.5 13.1 185 40-234 352-549 (591)
243 KOG3574 Acetyl-CoA transporter 98.3 1.8E-05 3.8E-10 69.2 12.2 143 38-189 28-188 (510)
244 KOG0255 Synaptic vesicle trans 98.2 0.0001 2.2E-09 70.4 16.4 143 85-244 353-500 (521)
245 PF02487 CLN3: CLN3 protein; 98.1 0.00037 8E-09 62.8 17.3 135 84-238 61-197 (402)
246 KOG4332 Predicted sugar transp 98.1 4.8E-06 1E-10 69.2 5.0 107 51-164 47-155 (454)
247 KOG2816 Predicted transporter 98.0 6.5E-05 1.4E-09 69.5 11.8 124 66-195 267-391 (463)
248 PF06609 TRI12: Fungal trichot 98.0 7.3E-05 1.6E-09 70.9 12.3 195 41-242 310-559 (599)
249 PF03219 TLC: TLC ATP/ADP tran 98.0 0.00072 1.6E-08 63.0 17.5 246 94-359 71-354 (491)
250 COG3202 ATP/ADP translocase [E 97.9 0.0034 7.5E-08 57.3 19.0 293 39-358 25-356 (509)
251 KOG2615 Permease of the major 97.8 0.00014 3E-09 63.9 9.3 121 69-195 290-413 (451)
252 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00035 7.6E-09 47.3 8.6 72 286-364 4-75 (77)
253 PRK15462 dipeptide/tripeptide 97.6 0.0033 7.2E-08 58.9 15.1 111 84-194 310-438 (493)
254 PF00854 PTR2: POT family; In 97.5 0.00059 1.3E-08 62.1 9.3 108 113-236 2-122 (372)
255 PF13000 Acatn: Acetyl-coenzym 97.4 0.0051 1.1E-07 56.4 13.6 279 44-341 3-331 (544)
256 KOG3810 Micronutrient transpor 97.4 0.00083 1.8E-08 58.3 7.8 134 94-241 54-187 (433)
257 PF02487 CLN3: CLN3 protein; 97.3 0.0047 1E-07 55.8 12.7 107 84-194 283-395 (402)
258 KOG2563 Permease of the major 97.3 0.00021 4.6E-09 64.2 3.6 122 69-196 294-421 (480)
259 KOG1330 Sugar transporter/spin 97.3 0.0021 4.6E-08 58.1 9.8 116 84-199 285-415 (493)
260 KOG1237 H+/oligopeptide sympor 97.2 0.017 3.7E-07 55.2 15.4 150 40-195 36-219 (571)
261 PF03092 BT1: BT1 family; Int 97.2 0.00069 1.5E-08 62.8 5.8 150 84-241 257-417 (433)
262 KOG3762 Predicted transporter 97.1 0.00061 1.3E-08 62.7 4.3 85 41-131 11-96 (618)
263 PRK03612 spermidine synthase; 97.0 0.053 1.2E-06 51.5 16.2 121 67-195 41-170 (521)
264 KOG3097 Predicted membrane pro 96.9 0.15 3.3E-06 44.4 16.8 98 92-190 68-177 (390)
265 PF06963 FPN1: Ferroportin1 (F 96.7 0.035 7.7E-07 51.1 12.2 128 60-193 277-415 (432)
266 COG3104 PTR2 Dipeptide/tripept 96.5 0.059 1.3E-06 49.7 12.7 109 84-192 326-452 (498)
267 KOG3098 Uncharacterized conser 96.5 0.049 1.1E-06 50.3 12.2 106 84-190 281-408 (461)
268 KOG2325 Predicted transporter/ 96.4 0.0083 1.8E-07 55.4 6.1 158 36-195 257-449 (488)
269 TIGR00939 2a57 Equilibrative N 96.2 0.046 1E-06 50.7 10.4 109 84-193 309-431 (437)
270 KOG1479 Nucleoside transporter 95.9 0.61 1.3E-05 42.3 15.4 120 44-168 21-150 (406)
271 PF05631 DUF791: Protein of un 95.9 0.089 1.9E-06 46.6 9.9 51 318-369 64-114 (354)
272 PF03137 OATP: Organic Anion T 95.7 0.003 6.5E-08 60.1 0.0 147 43-195 307-513 (539)
273 PF01733 Nucleoside_tran: Nucl 95.6 0.0037 8E-08 55.2 0.5 106 86-191 186-305 (309)
274 PF06779 DUF1228: Protein of u 95.2 0.12 2.6E-06 35.5 6.5 65 297-368 7-71 (85)
275 TIGR00805 oat sodium-independe 95.1 0.058 1.3E-06 52.7 6.7 78 43-126 332-413 (633)
276 PF01770 Folate_carrier: Reduc 94.9 0.79 1.7E-05 41.8 12.9 98 79-176 282-382 (412)
277 TIGR00939 2a57 Equilibrative N 94.5 0.94 2E-05 42.1 12.7 51 134-189 105-156 (437)
278 TIGR00806 rfc RFC reduced fola 94.3 0.21 4.5E-06 46.5 7.9 48 318-366 56-104 (511)
279 KOG3880 Predicted small molecu 93.9 0.44 9.4E-06 41.3 8.4 176 43-236 14-198 (409)
280 KOG1479 Nucleoside transporter 93.6 0.99 2.2E-05 40.9 10.6 106 84-191 284-400 (406)
281 PF07672 MFS_Mycoplasma: Mycop 92.2 0.23 4.9E-06 41.9 4.3 108 166-297 2-109 (267)
282 KOG0637 Sucrose transporter an 91.7 1.6 3.4E-05 40.2 9.3 110 86-195 336-469 (498)
283 PF07672 MFS_Mycoplasma: Mycop 87.4 8.6 0.00019 32.7 9.9 102 84-185 143-254 (267)
284 COG3559 TnrB3 Putative exporte 85.8 28 0.00061 31.9 16.3 85 140-231 163-257 (536)
285 KOG4332 Predicted sugar transp 83.4 27 0.00059 30.1 10.9 97 84-180 284-390 (454)
286 KOG3626 Organic anion transpor 83.2 1.4 3.1E-05 43.1 4.0 80 43-128 394-477 (735)
287 TIGR00769 AAA ADP/ATP carrier 82.3 44 0.00095 31.6 13.2 80 43-124 266-345 (472)
288 KOG3880 Predicted small molecu 82.0 8.1 0.00018 33.9 7.5 70 125-194 332-402 (409)
289 PF13000 Acatn: Acetyl-coenzym 81.2 50 0.0011 31.3 14.8 56 140-195 410-466 (544)
290 TIGR00880 2_A_01_02 Multidrug 81.2 12 0.00026 27.5 7.9 42 84-125 89-130 (141)
291 PF06813 Nodulin-like: Nodulin 78.4 6.4 0.00014 33.5 5.9 50 317-368 31-80 (250)
292 COG5336 Uncharacterized protei 74.3 18 0.00039 25.9 6.1 31 86-116 46-77 (116)
293 KOG1237 H+/oligopeptide sympor 74.0 52 0.0011 32.0 11.4 63 134-196 457-520 (571)
294 PF05978 UNC-93: Ion channel r 71.4 31 0.00067 26.9 7.6 36 330-366 44-79 (156)
295 PF07857 DUF1632: CEO family ( 69.9 70 0.0015 27.3 10.9 13 320-332 215-227 (254)
296 KOG3810 Micronutrient transpor 69.8 39 0.00084 30.4 8.5 112 81-195 270-384 (433)
297 TIGR00926 2A1704 Peptide:H+ sy 69.8 9.5 0.00021 37.6 5.5 65 299-369 4-69 (654)
298 KOG3574 Acetyl-CoA transporter 69.1 13 0.00027 33.8 5.5 55 141-195 375-430 (510)
299 PRK11469 hypothetical protein; 68.0 64 0.0014 26.1 14.5 50 319-368 130-179 (188)
300 KOG4830 Predicted sugar transp 66.2 5.4 0.00012 33.9 2.5 63 47-115 23-94 (412)
301 PF03547 Mem_trans: Membrane t 61.4 1.3E+02 0.0028 27.4 11.2 17 94-110 7-23 (385)
302 PF03219 TLC: TLC ATP/ADP tran 59.2 1.7E+02 0.0036 28.0 11.6 78 43-122 282-359 (491)
303 KOG2881 Predicted membrane pro 57.2 96 0.0021 26.4 8.1 24 342-365 258-281 (294)
304 TIGR02230 ATPase_gene1 F0F1-AT 53.9 33 0.00072 24.4 4.4 12 343-354 62-73 (100)
305 TIGR02840 spore_YtaF putative 52.6 1.3E+02 0.0028 24.7 13.7 49 319-368 153-203 (206)
306 PF06912 DUF1275: Protein of u 49.6 1.4E+02 0.0031 24.4 13.3 21 175-195 167-187 (209)
307 TIGR00267 conserved hypothetic 47.9 55 0.0012 26.0 5.4 31 95-125 126-156 (169)
308 PF06341 DUF1056: Protein of u 47.5 73 0.0016 20.4 4.7 36 134-169 27-62 (63)
309 COG1268 BioY Uncharacterized c 46.3 1E+02 0.0022 24.8 6.6 24 88-111 88-111 (184)
310 PRK10263 DNA translocase FtsK; 46.3 69 0.0015 34.2 7.0 13 182-194 143-155 (1355)
311 COG1230 CzcD Co/Zn/Cd efflux s 45.6 1.5E+02 0.0034 25.9 8.1 60 58-129 42-104 (296)
312 COG2119 Predicted membrane pro 43.2 1.7E+02 0.0038 23.5 9.0 36 91-126 143-178 (190)
313 PF02694 UPF0060: Uncharacteri 42.6 56 0.0012 23.5 4.1 46 84-129 56-101 (107)
314 PF02632 BioY: BioY family; I 41.2 1.6E+02 0.0034 22.8 6.8 25 89-113 60-84 (148)
315 PF07760 DUF1616: Protein of u 40.3 2.5E+02 0.0055 24.5 11.5 57 138-194 22-78 (287)
316 PF11947 DUF3464: Protein of u 39.7 47 0.001 25.8 3.6 49 135-185 97-145 (153)
317 PRK02237 hypothetical protein; 38.9 88 0.0019 22.6 4.6 46 84-129 58-103 (109)
318 COG2233 UraA Xanthine/uracil p 38.6 3.4E+02 0.0074 25.5 12.5 127 39-173 14-144 (451)
319 PF02990 EMP70: Endomembrane p 38.4 1.5E+02 0.0033 28.5 7.8 28 325-353 299-326 (521)
320 KOG2927 Membrane component of 35.9 24 0.00053 31.2 1.8 30 162-194 209-238 (372)
321 COG1971 Predicted membrane pro 35.6 2.4E+02 0.0052 22.9 15.2 27 342-368 155-181 (190)
322 PTZ00101 rhomboid-1 protease; 34.5 3.1E+02 0.0068 23.9 11.7 37 93-129 119-156 (278)
323 COG0477 ProP Permeases of the 34.4 1.7E+02 0.0038 24.5 7.2 40 323-363 39-78 (338)
324 PRK11469 hypothetical protein; 34.3 2.2E+02 0.0049 23.0 7.0 32 97-128 150-181 (188)
325 PF09527 ATPase_gene1: Putativ 34.1 1.1E+02 0.0025 18.7 6.0 33 89-121 7-40 (55)
326 COG4769 Predicted membrane pro 34.1 1E+02 0.0022 24.2 4.6 51 91-147 82-132 (181)
327 PRK13629 threonine/serine tran 33.1 4.2E+02 0.0091 24.9 11.5 30 164-193 18-47 (443)
328 TIGR00801 ncs2 uracil-xanthine 32.8 3E+02 0.0065 25.5 8.6 34 69-109 31-64 (415)
329 COG5547 Small integral membran 32.2 1.3E+02 0.0028 18.8 4.5 40 112-151 8-47 (62)
330 PF01733 Nucleoside_tran: Nucl 31.6 16 0.00034 32.3 0.0 42 143-189 5-47 (309)
331 KOG2601 Iron transporter [Inor 31.5 1.4E+02 0.0031 27.3 5.8 74 43-121 29-102 (503)
332 PF09605 Trep_Strep: Hypotheti 31.3 2.8E+02 0.0061 22.4 7.5 40 91-130 37-76 (186)
333 PF11151 DUF2929: Protein of u 31.1 1.4E+02 0.003 18.7 5.5 28 212-239 28-55 (57)
334 KOG1277 Endosomal membrane pro 27.9 4.5E+02 0.0097 24.8 8.2 24 84-107 325-348 (593)
335 PF00854 PTR2: POT family; In 27.5 2E+02 0.0044 25.9 6.6 79 52-131 42-121 (372)
336 PF11299 DUF3100: Protein of u 27.3 35 0.00076 28.4 1.3 48 142-190 178-226 (241)
337 PF11085 YqhR: Conserved membr 26.6 2.5E+02 0.0054 22.3 5.7 57 305-363 50-108 (173)
338 PF11283 DUF3084: Protein of u 26.4 1.4E+02 0.003 20.1 3.7 17 343-359 19-35 (79)
339 PF12805 FUSC-like: FUSC-like 26.1 3.2E+02 0.007 23.7 7.2 18 132-149 20-37 (284)
340 PF07857 DUF1632: CEO family ( 25.8 3.5E+02 0.0077 23.1 7.0 8 42-49 181-188 (254)
341 TIGR01667 YCCS_YHJK integral m 25.6 5.4E+02 0.012 26.0 9.3 53 99-151 40-97 (701)
342 COG2962 RarD Predicted permeas 25.4 2.4E+02 0.0052 24.6 5.9 77 276-366 63-139 (293)
343 PF04346 EutH: Ethanolamine ut 25.4 5.1E+02 0.011 23.4 12.3 91 84-175 49-144 (354)
344 TIGR01666 YCCS hypothetical me 25.1 4.9E+02 0.011 26.2 8.9 52 100-151 41-97 (704)
345 PF10639 UPF0546: Uncharacteri 24.9 67 0.0014 23.5 2.3 17 276-292 36-52 (113)
346 PF04281 Tom22: Mitochondrial 24.5 2.1E+02 0.0047 21.8 4.9 25 158-182 59-83 (137)
347 PRK03612 spermidine synthase; 24.3 4E+02 0.0086 25.7 8.0 56 288-349 20-75 (521)
348 PF10785 NADH-u_ox-rdase: NADH 24.3 2.5E+02 0.0053 19.4 5.9 40 96-135 32-78 (86)
349 PLN02878 homogentisate phytylt 24.1 4.5E+02 0.0098 22.9 7.4 72 108-179 195-266 (280)
350 PF02659 DUF204: Domain of unk 23.9 2.1E+02 0.0045 18.3 5.9 44 323-366 23-66 (67)
351 PF06379 RhaT: L-rhamnose-prot 23.8 5.4E+02 0.012 23.2 17.1 49 64-118 58-106 (344)
352 PF03596 Cad: Cadmium resistan 22.6 2.9E+02 0.0063 22.5 5.7 14 100-113 153-166 (191)
353 COG5336 Uncharacterized protei 21.6 1.1E+02 0.0023 22.2 2.6 34 122-155 60-93 (116)
354 TIGR00366 conserved hypothetic 21.3 6.9E+02 0.015 23.5 8.6 11 99-109 74-84 (438)
355 CHL00031 psbT photosystem II p 21.2 1.6E+02 0.0034 16.0 3.5 15 229-243 16-30 (33)
356 PF02694 UPF0060: Uncharacteri 21.1 1.6E+02 0.0035 21.2 3.5 46 322-368 53-98 (107)
357 PF08611 DUF1774: Fungal prote 20.7 2.9E+02 0.0063 19.6 4.6 21 168-188 27-47 (97)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-31 Score=234.08 Aligned_cols=280 Identities=19% Similarity=0.207 Sum_probs=243.5
Q ss_pred CCChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH
Q 017429 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (371)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~ 116 (371)
+..+..++.+.++.|..+....+....+|++.+|+|+|..+ .|+..++|.++..+++|+...+.||+.||++++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl 82 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLLL 82 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHH
Confidence 34556778888899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
..+.++.++++++++++|++.++++|++.|+..|.+.+. .++..++.|+++|++++++...+.+++.++|.+++.++.+
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 999999999999999999999999999999999998886 9999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcc
Q 017429 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (371)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (371)
.++||..|...+.++++.++ .+..+| |++..++.+ .+..+
T Consensus 163 ----------------~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~---------------------~~~~~ 203 (394)
T COG2814 163 ----------------LFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLP---------------------GPLRT 203 (394)
T ss_pred ----------------HhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCC---------------------cchhH
Confidence 67778888888888877655 567778 221111110 01123
Q ss_pred ccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
..+.+|+|.++...+..++....+++..+++..++.+. .|++....++++..++++.++++ .+++++.|| +.+
T Consensus 204 ~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v-----~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~ 276 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESV-----AGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPR 276 (394)
T ss_pred HHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHc-----cCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cch
Confidence 45688999999999999999988888888888888877 89999999999999999999999 589999999 888
Q ss_pred HHHHHHHHhhhhcc
Q 017429 355 MVARIAGVNFEHSV 368 (371)
Q Consensus 355 ~~~~~~~~~~~~~~ 368 (371)
+.+.....++.+.+
T Consensus 277 ~~l~~~~~l~a~~~ 290 (394)
T COG2814 277 RALIAALLLLALAL 290 (394)
T ss_pred hHHHHHHHHHHHHH
Confidence 88777766655543
No 2
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=2.2e-29 Score=236.58 Aligned_cols=301 Identities=15% Similarity=0.098 Sum_probs=234.6
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+..+..+++..++..++...++..+|.+.+++|.+.++ .+|+.+++.++...+.++.|+++||+|||++++++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 44566788899999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhc-cccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
++..++.+++++++|++.++++|+++|++.+...+. ...+.+.+ |+++|++++++......+|..+||.+++.+.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-- 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-- 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 999999999999999999999999999998887775 67776765 67899999999999999999999999999998
Q ss_pred CCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhh---------hhhhhhhh-----
Q 017429 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSY---------DALESASA----- 262 (371)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~~~~----- 262 (371)
.++||+.|++.....++. ++..+++||++.+..++.+...... ...+...+
T Consensus 157 --------------~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (495)
T PRK14995 157 --------------HFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSL 222 (495)
T ss_pred --------------cCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCch
Confidence 455666666665555544 3445667776533222111111000 00000000
Q ss_pred -----------------hhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhh
Q 017429 263 -----------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (371)
Q Consensus 263 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 325 (371)
...|.+.+.+....+++++|.+....+..++......+...++|.|++.. +|+++.++
T Consensus 223 ~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~a 297 (495)
T PRK14995 223 WVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEA 297 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHH
Confidence 00112222333446788999888877777777776677777888888776 79999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
|..+....++..++. ++.+++.||+|+|+.+..+.++..++.
T Consensus 298 g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 298 GMFMLPVMVASGFSG-PIAGILVSRLGLRLVATGGMALSALSF 339 (495)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 999999999999988 588999999999998887777665543
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=2.6e-29 Score=230.86 Aligned_cols=297 Identities=13% Similarity=0.067 Sum_probs=224.7
Q ss_pred CChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
..++.+..+++..++..++....+...|.+.+++|++..+ .+++.+++.+++.+++++.|+++||+|||+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 3456667788888889999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
+.++..++.+++++++|++.+++.|++.|++.+...+. ..++.|++|+++|++++++++.+..+|..++|.+++.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998888776 78999999999999999999999999999999999988641
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCC-CCccchhhhhhhhhhhhh---hhhhcccC
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHND-DDDSCDVSYDALESASAE---VKEEEGRE 271 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~ 271 (371)
.. . .+.++||..+++.++..++. .+..+++||+|++.+. .+++++...+..+....+ .++...+.
T Consensus 159 ~~-~---------~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (412)
T TIGR02332 159 DG-L---------MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHA 228 (412)
T ss_pred CC-C---------CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccc
Confidence 00 0 00345666667766666544 4456678888754221 111111111111100000 00000000
Q ss_pred ----CccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017429 272 ----ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (371)
Q Consensus 272 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (371)
...+++++ ++.++...+.+++......+..+++|.++.+. +.+++..+++.+.....++.+++. ++.+++
T Consensus 229 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l 302 (412)
T TIGR02332 229 AMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGM-IWWSRH 302 (412)
T ss_pred cccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHH-HHHHHH
Confidence 11223333 57777777777777777788888999998652 146788889999999999999988 588999
Q ss_pred HHHhchhHH
Q 017429 348 ERILGPIMV 356 (371)
Q Consensus 348 ~~r~~~~~~ 356 (371)
.||+++|+.
T Consensus 303 ~dr~~~r~~ 311 (412)
T TIGR02332 303 SDRLKERKH 311 (412)
T ss_pred hcccCccHH
Confidence 999987664
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=8.3e-30 Score=238.11 Aligned_cols=292 Identities=14% Similarity=0.068 Sum_probs=213.7
Q ss_pred HHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHH
Q 017429 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (371)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 123 (371)
...++..++..++....++..|.+.+++|++..+ .|++.+++.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 32 ~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 105 (467)
T PRK09556 32 LVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHH
Confidence 3555666667778888999999999999999999 9999999999999999999999999999999998888877
Q ss_pred HHHHHHHh-----HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 124 IFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 124 ~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
+..+..+. +++++.+++.|++.|++.+...+. ..+++|++|+++|++++++.+.+..+|..+++.++..+.+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 106 ICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 77666554 589999999999999998887775 899999999999999999999999999999999887665410
Q ss_pred CCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCc-cc
Q 017429 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PK 275 (371)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 275 (371)
+ ..+|+..+.+.++..++. ++.+++.+++|++....++++ ...+....+.+..++++..... ..
T Consensus 186 ------~-------~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (467)
T PRK09556 186 ------F-------DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPISEEDKETESTDMTKWQIFV 251 (467)
T ss_pred ------c-------cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccchhhhccccccCcHHHHHH
Confidence 0 113455555555554443 334445565553322111100 0000000000000000000001 12
Q ss_pred cccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH
Q 017429 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 355 (371)
+..+++|.+|...+..++......+...+.|.|+.+. +|++..+++...+...++.+++. ++.+++.||+++|+
T Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~-----~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r~ 325 (467)
T PRK09556 252 EYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQE-----LGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGRR 325 (467)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCc
Confidence 2367899999888888887777777888999998766 79999999999998999999988 58999999999987
Q ss_pred HHHHHH
Q 017429 356 VARIAG 361 (371)
Q Consensus 356 ~~~~~~ 361 (371)
.+..+.
T Consensus 326 ~~~~~~ 331 (467)
T PRK09556 326 ALVACI 331 (467)
T ss_pred hHHHHH
Confidence 665443
No 5
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.2e-29 Score=219.71 Aligned_cols=301 Identities=19% Similarity=0.151 Sum_probs=242.9
Q ss_pred CCChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH
Q 017429 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (371)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~ 116 (371)
+.+++.++.+++......+.+-.++...|.+.++.++|.+| .|++.+.+.+.+.++..+.|.++||.+.|+.+.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~ 98 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCceeeh
Confidence 34455566788888888888888999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh--hhh
Q 017429 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFL 193 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~--~~l 193 (371)
+++++.++.++++++.++.+.+.+..+++|+.+|.-.| +...++.++++++||+..++++++-++|+.+.|++. +++
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999777 599999999999999999999999999999999999 777
Q ss_pred cCcCCCCCCcccccccccCccchhHHHHHHHHHHH-HHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhh--ccc
Q 017429 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE--EGR 270 (371)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 270 (371)
.. +++|+..|++-++++++ +++.++..+|+|+..-..+-++ ...+..+.. +++++. ...
T Consensus 179 ~~----------------~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~-~~~d~~e~~-~~~~~~~~ls~ 240 (448)
T COG2271 179 AF----------------HGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEE-YRGDPLEIY-EEEKENEGLTA 240 (448)
T ss_pred Hh----------------ccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHH-hhcCchhhh-hhhccCCCccH
Confidence 76 55677777887777765 4556777888876543322111 000111110 000000 011
Q ss_pred CCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 350 (371)
...-.+.+++||.+|...+.+++....-++...|.|.|+.+. .|+|...++...+.+-.+++++. ++.|+++||
T Consensus 241 ~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDk 314 (448)
T COG2271 241 WQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGT-LLAGWLSDK 314 (448)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHH
Confidence 123456788999999999999999999999999999999998 89999999999999999999999 588999998
Q ss_pred h--chhHHHH-HHHHhhhhc
Q 017429 351 L--GPIMVAR-IAGVNFEHS 367 (371)
Q Consensus 351 ~--~~~~~~~-~~~~~~~~~ 367 (371)
+ |||..+. +++++..++
T Consensus 315 lfkgrR~p~~~i~~~~i~~~ 334 (448)
T COG2271 315 LFKGRRGPMALIFMLLITAS 334 (448)
T ss_pred hcccccchHHHHHHHHHHHH
Confidence 6 4554443 334444433
No 6
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1.7e-28 Score=227.12 Aligned_cols=283 Identities=14% Similarity=0.103 Sum_probs=203.6
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhcc---ccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQI---AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
+.+...++..+++.++...+....|.+.++++. +..+ ....+...+...++..++++++|+++||+|||+++..
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQ---LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 344455677888889998888888999999863 3332 0002333445556666999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHH--------HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHh
Q 017429 118 GTASVVIFNTLFGLSVNF--------WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~--------~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (371)
+.++++++.+++++++++ ..+++.|+++|++.|...+. .++++|++|+++|++..++.+.+...|..+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999887765 36899999999998887775 999999999999999999988888888888877
Q ss_pred hhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhc
Q 017429 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (371)
Q Consensus 189 i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (371)
+...+.....+ .....++||.+|++.++.+++..+....+||+++++.++
T Consensus 179 ~~~~~~~~~~~--------~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~---------------------- 228 (432)
T PRK10406 179 VVVVLQQTLED--------AELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA---------------------- 228 (432)
T ss_pred HHHHHHHhCCH--------HHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh----------------------
Confidence 76555421000 000146788888887777666555555566654321000
Q ss_pred ccCCccccccccccchHHHHHHHHHH-HhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017429 269 GREATPKKSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (371)
.++..++++++++++.+...+...+. ......+..++|.|+.+. +|++..+.+.......+...+++. +.+++
T Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~~~~~~i~~~~~~i~~~-~~G~l 302 (432)
T PRK10406 229 LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT-----AGMHANVASGIMTAALFVFMLIQP-LIGAL 302 (432)
T ss_pred hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 00112456677787777655554433 445566777888887655 688888888888888888888774 67899
Q ss_pred HHHhchhHHHHHHHH
Q 017429 348 ERILGPIMVARIAGV 362 (371)
Q Consensus 348 ~~r~~~~~~~~~~~~ 362 (371)
.||++||+.+..+.+
T Consensus 303 ~Dr~grr~~~~~~~~ 317 (432)
T PRK10406 303 SDKIGRRTSMLCFGS 317 (432)
T ss_pred HHHcCchHHHHHHHH
Confidence 999999987766544
No 7
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=1.9e-28 Score=230.69 Aligned_cols=299 Identities=15% Similarity=0.207 Sum_probs=231.0
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
.+..+++..++..++.....+.+|.+.+++|.+..+ .+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 344566777888888888999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
..++.++++.+++++.+++.|+++|++.+...+. .+++.|++|+++|+++++++..+..+|..+||.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 151 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE----- 151 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-----
Confidence 9999999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhh-------------hhhhhhhhh----
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVS-------------YDALESASA---- 262 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~-------------~~~~~~~~~---- 262 (371)
.++|+..+++.+...++.. +..+..||+++...++.+..... .+..+....
T Consensus 152 -----------~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (485)
T TIGR00711 152 -----------NYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNE 220 (485)
T ss_pred -----------CcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 3444444455555544433 34455666543222211110000 000000000
Q ss_pred ---------------hhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhH
Q 017429 263 ---------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (371)
Q Consensus 263 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 327 (371)
..++.+.+.+....++++++.++...+..++......+...++|.|.++. +|+++.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~ 295 (485)
T TIGR00711 221 ILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGL 295 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHH
Confidence 00111122233344678889888888888877777777788889888776 7999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
......++.+++. ++.+++.||+++|+.+..+..+..++.
T Consensus 296 ~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 296 HILPVGLAPMLSS-PIAGRMGDKIDPRKLVTIGLILYAVGF 335 (485)
T ss_pred HHHHHHHHHHHHH-HHHHHHHhhcCcHHHHHHHHHHHHHHH
Confidence 9999999999988 588999999999998888777665543
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=2.1e-28 Score=223.77 Aligned_cols=265 Identities=15% Similarity=0.136 Sum_probs=206.3
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
..++.+.+..+..........+.+|.+.+++|.+..+ .++..+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 82 (390)
T PRK03545 9 LRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFV 82 (390)
T ss_pred HHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 3444445544544444445566789999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
+.+++.+.+++++|++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+.++|..++|.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~---- 158 (390)
T PRK03545 83 LFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ---- 158 (390)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH----
Confidence 99999999999999999999999999988887775 8999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (371)
.++|+..+.+.++..++..+ ....+||.+++++ +. .+..++.
T Consensus 159 ------------~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~------~~-------------------~~~~~~~ 201 (390)
T PRK03545 159 ------------YLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS------GS-------------------LKSLPLL 201 (390)
T ss_pred ------------HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc------ch-------------------HHHHHHH
Confidence 55667766777666655443 3444565432110 00 0123457
Q ss_pred ccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
+++|.++......++..........+.+.+..+. .|.++.+++.+....+++.++++ ++.+++.||.++|....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~ 275 (390)
T PRK03545 202 FRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQV-----AGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLLI 275 (390)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHHH
Confidence 7888877665555544444444455566665544 68899999999999999999998 47899999999876543
No 9
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=6.2e-28 Score=221.77 Aligned_cols=301 Identities=13% Similarity=0.148 Sum_probs=217.4
Q ss_pred CCChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH
Q 017429 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (371)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~ 116 (371)
+.+++.+...++..+...++.....+..|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34556677888899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.+.++.+++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887775 9999999999999999999999999999999999999876
Q ss_pred cCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhh---hhhcccCC
Q 017429 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV---KEEEGREA 272 (371)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 272 (371)
. . ..+|+..+++.++..++.++....+||++++.++++++++ ..+..++...+. ++..+...
T Consensus 162 ~-------~-------~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 226 (405)
T TIGR00891 162 V-------W-------GDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKAL-VRTMVDILYGGEHRIANIVMTLA 226 (405)
T ss_pred h-------c-------CccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhh-hhhHHHHHhccchhhhhhhhhhh
Confidence 1 1 1236666676666655555556677876543221111100 000000000000 00000000
Q ss_pred cccccccc-ccc-hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 273 TPKKSLLK-NWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (371)
Q Consensus 273 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 350 (371)
...+...+ ++. +...................++|.|..+. +|++..+.+.+.+..+++.+++. ++.+++.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr 300 (405)
T TIGR00891 227 AAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD-----LGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDW 300 (405)
T ss_pred HHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 00011111 111 11222222223333334455667776554 78999999999999999999988 588999999
Q ss_pred hchhHHHHHHHHhh
Q 017429 351 LGPIMVARIAGVNF 364 (371)
Q Consensus 351 ~~~~~~~~~~~~~~ 364 (371)
+++|+.+..+.+..
T Consensus 301 ~g~~~~~~~~~~~~ 314 (405)
T TIGR00891 301 LGRRKAYVCSLLAG 314 (405)
T ss_pred hCchhhhHHHHHHH
Confidence 99999887665543
No 10
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=1.3e-27 Score=218.20 Aligned_cols=265 Identities=18% Similarity=0.183 Sum_probs=204.1
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
.|+.+..+....+..........+.+|.+.+++|.++++ .++..+++.++..+++++.|+++||+|||++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~ 91 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHH
Confidence 445545444444444444445567789999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
.++.+++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++...+.++|..++|.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-- 169 (394)
T PRK10213 92 AVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-- 169 (394)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999998887775 8999999999999999999999999999999999999988
Q ss_pred CCCCCcccccccccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccc
Q 017429 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (371)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
.++|+..+++.+++.++..+. ....||+++++. + .....+
T Consensus 170 --------------~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~----~---------------------~~~~~~ 210 (394)
T PRK10213 170 --------------LIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS----H---------------------QKQNTF 210 (394)
T ss_pred --------------hcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc----c---------------------chhHHH
Confidence 556666667666555544333 334566432110 0 001234
Q ss_pred ccccccchHHHHHHHHHHHhhhhhHHHHH-HHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH
Q 017429 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIF-SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (371)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 355 (371)
+.+++|.++...+..++..........++ |.|.. . +|+++.+.+..+...+++.+++. .+.+++.||.+++.
T Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~-----~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~~~ 283 (394)
T PRK10213 211 RLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMN-L-----AGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVKLA 283 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-----cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccchhH
Confidence 56778888877666555555555555555 55543 3 68999999999999999999998 57888999865443
Q ss_pred HH
Q 017429 356 VA 357 (371)
Q Consensus 356 ~~ 357 (371)
.+
T Consensus 284 l~ 285 (394)
T PRK10213 284 LA 285 (394)
T ss_pred HH
Confidence 33
No 11
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=5.3e-28 Score=220.77 Aligned_cols=279 Identities=18% Similarity=0.201 Sum_probs=218.8
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.++......+....+.....+..|.+.+++|.++++ .+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 3344444455566677778888999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
+.+++.+.+.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 154 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV---- 154 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999998887775 9999999999999999999999999999999999999887
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (371)
.++|+..+++.++..++..+ ..+..||+++++++++ .+. ..+..++.
T Consensus 155 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~~~~~~ 202 (385)
T TIGR00710 155 ------------WLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQ--IST------------------YFETFLLL 202 (385)
T ss_pred ------------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCC--HHH------------------HHHHHHHH
Confidence 55677766766665555443 3455666543221100 000 01134456
Q ss_pred ccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
+++++++...+...+..........+.|.+..+. +|+++.+.+.+.....++.++++ ++.+++.||+++|+.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDI-----MGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLR 276 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHH
Confidence 7788887776666655555555555666666544 78899999999999999999888 58899999999998877
Q ss_pred HHHHhhhhc
Q 017429 359 IAGVNFEHS 367 (371)
Q Consensus 359 ~~~~~~~~~ 367 (371)
.+..+..++
T Consensus 277 ~~~~~~~~~ 285 (385)
T TIGR00710 277 MGLILFAVS 285 (385)
T ss_pred HHHHHHHHH
Confidence 766554443
No 12
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=6.2e-28 Score=223.38 Aligned_cols=289 Identities=17% Similarity=0.250 Sum_probs=214.6
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
+++.++..++..+...++.....+..|.+.+++|.++.+ .++..+++.++..+++++.|+++||+|||+++..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~ 89 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 345566777788888888888889999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
.++.+++.++++++++++.+++.|++.|++.+...+. ..++.|++|+++|+++.++...+..+|.++++.+.+.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~-- 167 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE-- 167 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc--
Confidence 9999999999999999999999999999998877765 8999999999999999999999999999999999988887
Q ss_pred CCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccc
Q 017429 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (371)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (371)
.++|+..+++..+..++........||++++..++.+++ .++.++.........++
T Consensus 168 --------------~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 223 (426)
T PRK12307 168 --------------AYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGK----------GKHSQSAWSVFSLSMKG 223 (426)
T ss_pred --------------cCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhcc----------ccccccchhhhhHHHHH
Confidence 455666666644333333222233444432111100000 00000000011124556
Q ss_pred cccccchHHHHHHHHHH---HhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 278 LLKNWPLMSSIIVYCVF---SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 278 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
+++++.++......... .........++|.|... .|+++.+.+.+.+..+++.++++ ++.+++.||+++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~ 296 (426)
T PRK12307 224 LFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLK 296 (426)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccH
Confidence 77777776544332222 22223355677777654 57888999999999999999988 5889999999999
Q ss_pred HHHHHHHHhhhh
Q 017429 355 MVARIAGVNFEH 366 (371)
Q Consensus 355 ~~~~~~~~~~~~ 366 (371)
+.+..+.++..+
T Consensus 297 ~~~~~~~~~~~~ 308 (426)
T PRK12307 297 KTFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHH
Confidence 988777655443
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=3.1e-28 Score=222.73 Aligned_cols=276 Identities=17% Similarity=0.151 Sum_probs=216.1
Q ss_pred HhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHh
Q 017429 52 CTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (371)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (371)
+..++...+....|.+.+++|.+..+ .+++.+++.++..++.++.|+++||+|||+++..+.++.+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 78 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF 78 (399)
T ss_pred HHHHHHHhhhHhHHHHHHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH
Confidence 44556667778888999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccc
Q 017429 132 SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (371)
Q Consensus 132 ~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~ 210 (371)
+++++.+++.|++.|++.+...+. ..++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------------- 143 (399)
T TIGR00893 79 AGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI--------------- 143 (399)
T ss_pred HcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH---------------
Confidence 999999999999999998887775 9999999999999999999999999999999999999887
Q ss_pred cCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHH
Q 017429 211 GKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 289 (371)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
..+|+..+.+.++..++..+. .+..||++++.+...++++....+......+.++++...+...++.+++|+++...+
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (399)
T TIGR00893 144 -HFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLAL 222 (399)
T ss_pred -hCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHH
Confidence 555666667766665554443 445566554322211111100000000000111112223344567788899988888
Q ss_pred HHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH
Q 017429 290 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (371)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 355 (371)
..++..........+.|.|..+. +|.++.+.+.+.....++.+++. ++.+++.||+++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 223 GQFLVNIGLGFFLTWFPTYLVQE-----RGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHH-----hcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcc
Confidence 88888888888888889888765 78899999999999999999988 58899999999985
No 14
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=1.2e-27 Score=221.03 Aligned_cols=296 Identities=14% Similarity=0.122 Sum_probs=219.8
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
....+..+.+..+...+......+..|.+.+++|.++.+ .++..+.+.+++.+++++.|+++||+|||+++..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g 97 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITG 97 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 334555667777788888888889999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH---HhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 119 TASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 119 ~~~~~~~~~~~---~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.++.+++.+++ ..+++++.+++.|+++|++.|...+. +.++.|+.|+++|.+.+++.+....+|..+||.+++.+.
T Consensus 98 ~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 98 LFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999775 45789999999999999998888775 888999877777777899999999999999999988765
Q ss_pred CcCCC-----------CCCcccccccccCccchhHHHHHH-HHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhh
Q 017429 195 QPAEK-----------YPNLFSSESLFGKFPYFLPCLCIS-LFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESAS 261 (371)
Q Consensus 195 ~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (371)
....+ .....+|+..+ ..+|+.+++... +..++.++. ...+||.+.++ .++++
T Consensus 178 ~~~~~~~~~~~~~~l~~~~~~~w~~~~-~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~---~~~~~---------- 243 (438)
T PRK10133 178 LSNVPHQSQDVLDKMTPEQLSAYKHSL-VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN---HSDAK---------- 243 (438)
T ss_pred hcCCcccchhhhhccChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---ccccc----------
Confidence 21100 00012455554 456888776433 332222222 23344422110 00000
Q ss_pred hhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHh-cCCCccCCccccchhhhHHHHHHHHHHHHHH
Q 017429 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWA-NSPKKLGGLNYSTQMVGEVLAITGFSLLVFQ 340 (371)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 340 (371)
..+.....++++++|.++...+..++......+...+.+.|+ ++. +|+++.+++..+....++.++++
T Consensus 244 ------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~-----~g~s~~~ag~~~~~~~~~~~vG~ 312 (438)
T PRK10133 244 ------QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEI-----PGMTAGFAANYLTGTMVCFFIGR 312 (438)
T ss_pred ------ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 001112345678889888777766766666666667777674 333 79999999999999999999999
Q ss_pred HHHHHHHHHHhchhHHHHHHHHhhhh
Q 017429 341 LSLYPFLERILGPIMVARIAGVNFEH 366 (371)
Q Consensus 341 ~~~~~~l~~r~~~~~~~~~~~~~~~~ 366 (371)
+..+++.||+++|+++..+.++..+
T Consensus 313 -~~~g~l~~r~g~~~~l~~~~~~~~~ 337 (438)
T PRK10133 313 -FTGTWLISRFAPHKVLAAYALIAMA 337 (438)
T ss_pred -HHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 5889999999999988777655443
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=6.1e-28 Score=217.53 Aligned_cols=245 Identities=15% Similarity=0.051 Sum_probs=186.6
Q ss_pred ccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHH
Q 017429 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (371)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (371)
....+.+.+|.+.+|+|++..+ .|++.+++.+++.+++++.|+++||+|||+++..+......+.......+++
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 79 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNY 79 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccH
Confidence 3455678999999999999999 9999999999999999999999999999988776655554544333334789
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccc
Q 017429 136 WMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (371)
Q Consensus 136 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~ 215 (371)
+.+++.|+++|++.+...+....++|++|+++|++++++.+.+..+|..+++.+++.+.+ .++|
T Consensus 80 ~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~----------------~~gW 143 (368)
T TIGR00903 80 EWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT----------------AGGL 143 (368)
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------ccch
Confidence 999999999999988765567777999999999999999999999999999999999987 5566
Q ss_pred hhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHH
Q 017429 216 FLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (371)
Q Consensus 216 ~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
|..+++.++++++. ++..+++||+|+++.+.. +.. + ..+++++++++|.+|...+.+++.
T Consensus 144 r~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~---~~~-----------~-----~~~~~~~ll~~~~~~~~~~~~~~~ 204 (368)
T TIGR00903 144 QLLIIPIAAVAAAGIILVLAALPALPFQAAEGF---GFK-----------D-----AVKEFGALAGRKDLWIIGAILGFG 204 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCc---chH-----------H-----HHHHHHHHHcChhHHHHHHHHHHH
Confidence 76667766665544 445677898775432110 000 0 001356788999999999999999
Q ss_pred HhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017429 295 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (371)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~ 352 (371)
.....++.++.|.|+.+ .|++.. .+.......+.+.++. +++.||..
T Consensus 205 ~~~~~~~~~wlp~~L~~------~g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~ 251 (368)
T TIGR00903 205 VALFDNLAIWLEAALRP------AGLEDI-AGDAVALAILAGLIGV----AVIPDRVA 251 (368)
T ss_pred HHHHHHHHHHHHHHHHH------CCCChH-HHHHHHHHHHHHHHHH----HHhhHHhh
Confidence 99999999999999964 356654 5555555555555544 44555543
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=6.1e-28 Score=223.45 Aligned_cols=281 Identities=16% Similarity=0.159 Sum_probs=212.8
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.++...+..++..+........+|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||+++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 3334555666666777777888899999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
+.+++.++++++++++.+++.|++.|++.|...+. .+++.|++|+++|++++++.+.+..+|..++|.+++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~---- 172 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL---- 172 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999987776665 8999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccc-cc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK-KS 277 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (371)
.++|+..+++.++..++. ++..+++||++.+.......+. ..++.+.. ++.+.++.+..... ..
T Consensus 173 ------------~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 238 (434)
T PRK11663 173 ------------HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEW-RHDALELA-QQQEGAGLSRKEILTKY 238 (434)
T ss_pred ------------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccc-cccccccc-hhccccCCChhhhHHHH
Confidence 556677667766655443 3445567876643221111000 00000000 00000000000111 12
Q ss_pred cccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017429 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (371)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~ 351 (371)
.++++.++...+..++......+...++|.|+.+. +|++..+++...+...++..+++ ++.+++.||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~ 306 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSET-----LGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKL 306 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHh
Confidence 56678888877777776666677777889888655 79999999999999999999999 5889999998
No 17
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=7.7e-28 Score=217.93 Aligned_cols=280 Identities=16% Similarity=0.130 Sum_probs=216.0
Q ss_pred HHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 125 (371)
+....++..++.....+.+|.+..+++.+..+ .+++.+++.++..+++++.|+++||+|||++++.+.++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH
Confidence 44566677777778888899999999999988 999999999999999999999999999999999999998888
Q ss_pred HHHHHhHH-----HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 126 NTLFGLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 126 ~~~~~~~~-----~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
.++..+.. +++.+++.|++.|++.+...+. .+++.|++|+++|++.+++.+.+..+|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 153 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---- 153 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 88888877 9999999999999998888886 9999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (371)
.++|+..+++.++..++..+..+..++++.+..++++.++.. ..+..+..+.++
T Consensus 154 ------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 207 (365)
T TIGR00900 154 ------------TLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAV--------------LRDTREGIKFVL 207 (365)
T ss_pred ------------HhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhH--------------HHHHHhHHHHHH
Confidence 556677667766655555444443332211111111000000 000112345677
Q ss_pred cccchHHHHHHHHHHHhhhhhHH-HHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 280 KNWPLMSSIIVYCVFSLHDMAYS-EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
++|.++......++......... .+.|.|..+. +|.++.+.+.+....+++.+++.. +.+++.||.++++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY-----LGRGSTHYGWVLAAFGLGALLGAL-LLGLLGRYFKRMALMT 281 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchhHHHH
Confidence 88888877777666666555554 6777777654 688999999999999999999884 7789999999998887
Q ss_pred HHHHhhhhc
Q 017429 359 IAGVNFEHS 367 (371)
Q Consensus 359 ~~~~~~~~~ 367 (371)
.+..+..++
T Consensus 282 ~~~~~~~~~ 290 (365)
T TIGR00900 282 GAIFVIGLA 290 (365)
T ss_pred HHHHHHHHH
Confidence 765544433
No 18
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=1.1e-27 Score=218.28 Aligned_cols=273 Identities=16% Similarity=0.246 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
.++.+....++.........+.+|.+.+++|.+..+ .++..+++.++..+++++.|+++||+|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 77 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVAL 77 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 455666777778888888889999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
.+++.++++++++++.+++.|++.|++.+...+. ..++.|++|+++|+++++....+..+|..++|.+++.+.+
T Consensus 78 ~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~----- 152 (382)
T PRK10091 78 CVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ----- 152 (382)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh-----
Confidence 9999999999999999999999999998887775 8889999999999999999999999999999999999987
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccc
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (371)
.++|+..+.+.++..++..+ ..+.+||.+++.+ . +.. ...+.+
T Consensus 153 -----------~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~--~---~~~--------------------~~~~~~ 196 (382)
T PRK10091 153 -----------EFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK--G---GLR--------------------EQFHFL 196 (382)
T ss_pred -----------hccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc--c---CHH--------------------HHHHHh
Confidence 55667666776665554433 3456777532110 0 000 011234
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Q 017429 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (371)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~ 359 (371)
+++..+......++.........++.+.+..+. +|+++.+.+.+.+..+++.++++ ++.+++.||+++++.+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~~ 270 (382)
T PRK10091 197 RSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFI-----SGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAAV 270 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHHH
Confidence 566665554444333333333334445555443 78999999999999999999999 588999999999998877
Q ss_pred HHHhhhhc
Q 017429 360 AGVNFEHS 367 (371)
Q Consensus 360 ~~~~~~~~ 367 (371)
+..+..++
T Consensus 271 ~~~~~~i~ 278 (382)
T PRK10091 271 TDFIIVLA 278 (382)
T ss_pred HHHHHHHH
Confidence 76665544
No 19
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=2.1e-27 Score=228.01 Aligned_cols=189 Identities=19% Similarity=0.238 Sum_probs=162.6
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+.++.+..++....+...+|.+.++++++..+ .+++.+++.++.+++++++|+++||+|||+++++++++.++
T Consensus 171 i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i 244 (742)
T TIGR01299 171 VLGLALMADGVEVFVVGFVLPSAEKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGF 244 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 444555556666677888899999999999988 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
+.++++++++++.++++|++.|++.|...++ .++++|++|++.|++.+++...+..+|.++++.++..+.. .
T Consensus 245 ~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~-------~ 317 (742)
T TIGR01299 245 FAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP-------H 317 (742)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h
Confidence 9999999999999999999999998887775 9999999999999999999999999999999999888775 4
Q ss_pred cccccc----ccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCC
Q 017429 204 FSSESL----FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDD 246 (371)
Q Consensus 204 ~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 246 (371)
+||+.. +...+||..+++.++..++.++..+++||+|++...+
T Consensus 318 ~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~ 364 (742)
T TIGR01299 318 YGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLEN 364 (742)
T ss_pred ccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHC
Confidence 455421 2245789888888888877778888999999875443
No 20
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=1.1e-27 Score=217.14 Aligned_cols=294 Identities=13% Similarity=0.135 Sum_probs=213.2
Q ss_pred HHHHHHHHHHhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
++..++..++.........+..|. +.+++|++..+ .+++.+++.++..+++++.|+++||+|||+.++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 445666777777777888899995 88999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHH-HHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCC--
Q 017429 122 VVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-- 198 (371)
Q Consensus 122 ~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~-- 198 (371)
.+++.+++++++ +++.+++.|++.|++.+...+...+++|++|+++|++++++......+|..+++.+++.+.....
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 99999999999999876665568899999999999999999987778888877777766654110
Q ss_pred -CCCCcccccccccCccchhHH-HH-HHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccc
Q 017429 199 -KYPNLFSSESLFGKFPYFLPC-LC-ISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (371)
Q Consensus 199 -~~~~~~g~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
+.+... +|+..+ +. ..+..+..++.....+|++++++++++.+.. +... . .+.......
T Consensus 157 ~~~~~~~---------~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~----~~~~~~~~~ 218 (366)
T TIGR00886 157 AGLPAHL---------AWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK--GARW---S----VGTGALGDQ 218 (366)
T ss_pred ccccccc---------cccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc--cccc---c----ccchhHHHH
Confidence 000112 344444 22 2222233344445556655332111100000 0000 0 000011134
Q ss_pred cccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH
Q 017429 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 355 (371)
++.+++|+++...+..++..........+.+.|..+. +|+++.+++.+.....+..++++ ++.+++.||+++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~ 292 (366)
T TIGR00886 219 LKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQ-----FGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGGAR 292 (366)
T ss_pred HHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhccch
Confidence 5677888888877777776666677778888888765 78999999998888888888888 58899999999987
Q ss_pred HHHHHHHhhhh
Q 017429 356 VARIAGVNFEH 366 (371)
Q Consensus 356 ~~~~~~~~~~~ 366 (371)
.+..+.....+
T Consensus 293 ~~~~~~~~~~~ 303 (366)
T TIGR00886 293 KLLMSFLGVAM 303 (366)
T ss_pred hHHHHHHHHHH
Confidence 76665544433
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=2.6e-27 Score=217.82 Aligned_cols=282 Identities=16% Similarity=0.100 Sum_probs=214.4
Q ss_pred CChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
+++..++..+...++..++.....+..|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 3445556677778888888888899999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
+.++..++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 164 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG- 164 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 99999999888899999999999999999998887775 9999999999999999999999999999999999988876
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccc
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
..+|+..+++.+++.++.. +..+++||++++..++.++++. + ...
T Consensus 165 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~-----------------~~~ 210 (406)
T PRK11551 165 ---------------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR--A-----------------PVL 210 (406)
T ss_pred ---------------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh--h-----------------hhH
Confidence 5566766676665544433 3455678876432221110000 0 000
Q ss_pred cccc---cccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017429 276 KSLL---KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (371)
Q Consensus 276 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~ 352 (371)
+..+ +.+..+.....+++..........+.|.+..+ .|+++.+.+...+..+++.++++ ++.+++.||.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g 283 (406)
T PRK11551 211 RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG------QGLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLR 283 (406)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 0111 11222333333333334444556667777654 58899999999999999999998 58899999999
Q ss_pred hhHHHHHHHHhhhhc
Q 017429 353 PIMVARIAGVNFEHS 367 (371)
Q Consensus 353 ~~~~~~~~~~~~~~~ 367 (371)
+|+.+..+.+...++
T Consensus 284 ~~~~~~~~~~~~~~~ 298 (406)
T PRK11551 284 PRRVVLLIYAGILAS 298 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999887765544433
No 22
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=6.2e-27 Score=219.43 Aligned_cols=299 Identities=15% Similarity=0.127 Sum_probs=225.5
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
.+.++.+++..++..++....++..|.+.+++|.+..+ .+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 34566777788888888888899999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~ 198 (371)
++.+++.+++.++++++.+++.|+++|++.+...+. .+++.|.+|+++|+++.++.+....+|..+||.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~--- 159 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE--- 159 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---
Confidence 999999888888999999999999999998888775 8999999999999999999999999999999999999988
Q ss_pred CCCCcccccccccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhh---------hhhhhh-------
Q 017429 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYD---------ALESAS------- 261 (371)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~---------~~~~~~------- 261 (371)
.++|+..+.+......+..+. ....|+.+.... +.+....... ..++..
T Consensus 160 -------------~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T PRK10504 160 -------------YASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPL 225 (471)
T ss_pred -------------hccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchH
Confidence 455666666665554444333 344444332211 1110000000 000000
Q ss_pred ---------------hhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhh
Q 017429 262 ---------------AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (371)
Q Consensus 262 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 326 (371)
...++.....+....++++||+++...+..++..........+.|.|.+.. +|.++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g 300 (471)
T PRK10504 226 AIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIG-----LGFSPFHAG 300 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHH
Confidence 000111111222234578999988887777777666666666778887654 788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhc
Q 017429 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHS 367 (371)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~ 367 (371)
+......++.+++. ++.+++.||+++|+.+..+.++..++
T Consensus 301 ~~~~~~~~~~~~~~-~~~~~l~~r~g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 301 LMMIPMVLGSMGMK-RIVVQVVNRFGYRRVLVATTLGLALV 340 (471)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 99988888888776 47889999999999988777755543
No 23
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=4.2e-27 Score=219.86 Aligned_cols=284 Identities=12% Similarity=0.097 Sum_probs=205.8
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
++.+...+...++.........+..|.+.+++|++..+ .+++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34455566666666666677788899999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
++.+++.++++++++++.+++.|++.|++.+...+...+++|++|+++|++++++.+....+|..+++.+.+.+......
T Consensus 109 ~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 109 MLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998776555667889999999999999999877777777776666554321000
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (371)
. +. -...+||..+++.+++.++..+..+++++++++...+ +.. +. .+.++.+....+++.+
T Consensus 189 ~----~~---~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~----~~~-----~~---~~~~~~~~~~~~~~~~ 249 (476)
T PLN00028 189 A----GA---PSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR----ELK-----KS---GTMPKDSFSKVLRYGV 249 (476)
T ss_pred c----CC---cchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh----hHH-----hc---CccccccHHHHHHHHH
Confidence 0 00 0023567777777776665555444454432211100 000 00 0000001112345567
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
+++++|...+.+++..........+.|.|+.+. +|++..+++.+.+..+++.++++ ++.+++.||+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r 318 (476)
T PLN00028 250 TNYRTWILALTYGYSFGVELTMDNIIAEYFYDR-----FGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARR 318 (476)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHh
Confidence 788888777776666555566677788887654 79999999999999999999999 5889999999865
No 24
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=2.9e-27 Score=217.17 Aligned_cols=264 Identities=14% Similarity=0.173 Sum_probs=209.4
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+.+..+...+......|.+|.+.++++.+..+ .++..+++.+++.+++++.|+++||+|||++++.+.++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 344555666677888899999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
+.+++.++++++.++++|+++|++.+...+. ..++.|.+|+++|++++++......+|..+||.+++.+.+
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------- 165 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------- 165 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999987765555 7889999999999999999999999999999999999987
Q ss_pred ccccccccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccccc
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
.++|+..|++.++..++..+. .+++||++++++++.+ .+ ...+.++++++||
T Consensus 166 --------~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~-~~------------------~~~~~~~~ll~~~ 218 (413)
T PRK15403 166 --------FVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS-AK------------------SVLRDFRNVFRNR 218 (413)
T ss_pred --------hcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC-hH------------------HHHHHHHHHHcCH
Confidence 556777777777766665543 5567886542111100 00 0012456778999
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
.++...+..++.......+..+.|.++.+. +|+++.+.++.......+..++......+..|+.++|
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~ 285 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDA-----GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR 285 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh
Confidence 999888877777766677777778887765 7899999999988777787777754444444554444
No 25
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=3.7e-27 Score=216.72 Aligned_cols=276 Identities=17% Similarity=0.148 Sum_probs=214.7
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+.+..++..+....+.+.+|.+.+++|.+..+ .++..+.+.++..+++++.|+++||+|||+++..+.++.++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 17 CLVLFEFATYIANDMIQPGMLAVVEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455556666677888889999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
+.+.+..+++++.+++.|++.|++.+...+. .+++.|.+|+++|.+..++......+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------- 162 (406)
T PRK15402 91 TCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-------- 162 (406)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999998887665 8999999999999999999888888899999999999887
Q ss_pred ccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccccc
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
..+|+..+++.++..++..+ ..+..||++++..++.+. + +.....+.++++|
T Consensus 163 --------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~ 215 (406)
T PRK15402 163 --------VLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-K------------------ELGRDYKLVLKNR 215 (406)
T ss_pred --------ccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-H------------------HHHHHHHHHHcCc
Confidence 44556666666665555444 344567664322111000 0 0012345678888
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Q 017429 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (371)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 362 (371)
+++...+..++.......+....|.+..+. +|+++.+.+.......++.+++. ++.+++.||.++|+.+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISG-----EQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 888777766666555555666667766554 78899999988777777777777 578999999999998877766
Q ss_pred hhhhc
Q 017429 363 NFEHS 367 (371)
Q Consensus 363 ~~~~~ 367 (371)
+..++
T Consensus 290 ~~~~g 294 (406)
T PRK15402 290 PMVAG 294 (406)
T ss_pred HHHHH
Confidence 55443
No 26
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=2.5e-27 Score=222.52 Aligned_cols=298 Identities=14% Similarity=0.105 Sum_probs=205.4
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHH-HHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+.+...++..++..++...+....|.+.++++.+.++.. .....+ ..++..++..++++++|+++||+|||+++.++.
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSV-QMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 445567788889999999999999999999876543310 100111 247788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHH--------HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 120 ASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
++++++.+++++++++.. +++.|+++|++.|...+. .++++|++|+++|++..++...+..+|..+|+.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998864 889999999998887775 99999999999999999999888888888887766
Q ss_pred hhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhccc
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
..+...... .....++||.+|++.++..++.++....+||+|++...+++.++. ..+.. .+.
T Consensus 175 ~~~~~~~~~--------~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~--------~~~~~--~~~ 236 (490)
T PRK10642 175 VLISTIVGE--------ANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQG--------DREGL--QDG 236 (490)
T ss_pred HHHHHhcCH--------HHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhh--------ccccc--ccc
Confidence 554321100 000156788888887766665555666788887542111000000 00000 001
Q ss_pred CCccccccccc-cchHH-HHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017429 271 EATPKKSLLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (371)
Q Consensus 271 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (371)
...++++++++ ++.+. .....++.....+....+.|.|+... +|++..+.+.......++.+++. ++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~ 310 (490)
T PRK10642 237 PKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN-----LHYSEDHGVLIIIAIMIGMLFVQ-PVMGLLS 310 (490)
T ss_pred ccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 12234444442 22222 22222333344556667788887654 68888777777777777788877 5789999
Q ss_pred HHhchhHHHHHHHHh
Q 017429 349 RILGPIMVARIAGVN 363 (371)
Q Consensus 349 ~r~~~~~~~~~~~~~ 363 (371)
||+|||+.+..+.+.
T Consensus 311 dr~grr~~~~~~~~~ 325 (490)
T PRK10642 311 DRFGRRPFVILGSVA 325 (490)
T ss_pred HHhccHHHHHHHHHH
Confidence 999999988776543
No 27
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=6.3e-27 Score=213.88 Aligned_cols=258 Identities=13% Similarity=0.059 Sum_probs=201.3
Q ss_pred ccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHH
Q 017429 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (371)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (371)
....+.+|.+.+|+|+|..+ .++..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+.++++++++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHH
Confidence 56779999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccch
Q 017429 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (371)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~ 216 (371)
+++.|+++|++.+...+. ..++.|++| ++|+++++.+..+...|..+++.+++.+.+. ..+|+
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~---------------~~~w~ 163 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH---------------SETWY 163 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHH
Confidence 999999999998887775 888999987 7799999999999999999999999988762 12455
Q ss_pred hHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHh
Q 017429 217 LPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (371)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
..+...++..++.++..+...+.+++ ++++ + +...++.+++++.+...+.+++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~---~~~~~~~l~~~~~~~l~~~~~~~~~ 219 (393)
T PRK09705 164 QTLAWWALPAVVALFAWWWQSAREVA--SSHK-------------------T---TTTPVRVVFTPRAWTLGVYFGLING 219 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc--cccC-------------------C---CcCCcccccCHhHHHHHHHHHHHHH
Confidence 44444333333333322222211110 0000 0 0112345567777776666666666
Q ss_pred hhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
...+...+.|.|+.+ +|+++.+++...+..+++.++++. +.+++.||.++|+.+..+..+..++.
T Consensus 220 ~~~~~~~~lp~~l~~------~g~s~~~ag~~~~~~~i~~i~g~~-~~g~l~~r~~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 220 GYASLIAWLPAFYIE------IGASAQYSGSLLALMTLGQAAGAL-LMPAMARHQDRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHH------cCCChhhhhHHHHHHHHHHHHHHH-HHHHHHhhccchHHHHHHHHHHHHHH
Confidence 666777788888754 588999999999999999999994 78999999999988877766655443
No 28
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=1.4e-27 Score=215.20 Aligned_cols=278 Identities=25% Similarity=0.421 Sum_probs=212.8
Q ss_pred HHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 017429 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (371)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 125 (371)
++..++..+......+..| .+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH
Confidence 4566677777777889999 889999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcc
Q 017429 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (371)
Q Consensus 126 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~ 204 (371)
.++..++++.+.+++.|++.|++.+...+. ..++.|++|+++|++++++.+.+..+|..++|.+++.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~--------- 146 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS--------- 146 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh---------
Confidence 666666677779999999999998888776 9999999999999999999999999999999999999987
Q ss_pred cccccccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCc-ccccccccc
Q 017429 205 SSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKNW 282 (371)
Q Consensus 205 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 282 (371)
.++|+..+++.++..++..+. .+++++++++...+++.++. +++++... .++.+++++
T Consensus 147 -------~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 206 (352)
T PF07690_consen 147 -------YFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------SKKPKPLKPGFKSLFKNP 206 (352)
T ss_dssp -------HCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHHH
T ss_pred -------ccccccccccccchhhhhhhhHhhhhhhcccccccccccccc-------------cccccccccccccccccc
Confidence 555666667777777666543 35555554443332221110 00011112 366677777
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCcccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHH
Q 017429 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (371)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~ 361 (371)
.+|......++..........+.|.|+.+. +|++ ..+.+.+....++...++. ++.+++.||+++++......
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~ 280 (352)
T PF07690_consen 207 VLWILLIAFFLFFFVFSGFSFFLPLYLQEV-----LGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAI 280 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHHhhcccchhhhhc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHH
Confidence 777555555655556666778888876555 7888 7899999999999999988 57889999999876665544
Q ss_pred Hhhh
Q 017429 362 VNFE 365 (371)
Q Consensus 362 ~~~~ 365 (371)
....
T Consensus 281 ~~~~ 284 (352)
T PF07690_consen 281 LLLI 284 (352)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=1e-27 Score=218.13 Aligned_cols=274 Identities=16% Similarity=0.161 Sum_probs=209.0
Q ss_pred HHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHH
Q 017429 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (371)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 129 (371)
.+..........+..|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||++++.+.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH
Confidence 4455666777788889999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHH-hhhhhhcCcCCCCCCccccc
Q 017429 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSSE 207 (371)
Q Consensus 130 ~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~i~~~l~~~~~~~~~~~g~~ 207 (371)
+++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++| .+++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------ 145 (379)
T TIGR00881 78 GFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE------------ 145 (379)
T ss_pred HHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh------------
Confidence 99999999999999999998887775 99999999999999999999999999999999 56666665
Q ss_pred ccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHH
Q 017429 208 SLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (371)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
..+|+..+++.+++.++. ++..++.||++++...++++++.. ++.+...++.+++....+...++++++|.++.
T Consensus 146 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (379)
T TIGR00881 146 ----LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLWY 220 (379)
T ss_pred ----cCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHHH
Confidence 445666666666555443 444556676654322111111100 00000000011111111223456778898888
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017429 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (371)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~ 352 (371)
..+..++..........+.|.|..+. +|+++.+.+...+...++.+++. ++.+++.||..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~ 280 (379)
T TIGR00881 221 ISLGYVFVYVVRTGILDWSPLYLTQE-----KGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLF 280 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHc
Confidence 88887777777777888888888765 78999999999999999999988 47889999753
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=4.5e-27 Score=213.75 Aligned_cols=264 Identities=13% Similarity=0.095 Sum_probs=201.3
Q ss_pred cccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHH
Q 017429 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (371)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (371)
.....+..|.+.+++|+++.+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~ 92 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLA 92 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHH
Confidence 456678899999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccc
Q 017429 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (371)
Q Consensus 137 ~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~ 215 (371)
.+++.|++.|++.+...+. ...+.|++| ++|+++.++...+..+|..+++.+.+.+.+ .++|
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------------~~~~ 155 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN----------------LEGV 155 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh----------------cccH
Confidence 9999999999998876654 777888887 579999999999999998877666666665 4567
Q ss_pred hhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHH
Q 017429 216 FLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (371)
Q Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
+..+++.++..++..+. .++++|++++...++++. +......++.++++.++...+..++.
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (377)
T TIGR00890 156 PAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEV------------------SVKDYTVWEMLRTPQFWVLYLSFFLN 217 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHheecCchhccccCccc------------------chhhhhHHHHHcCccHHHHHHHHHHH
Confidence 77777777666655443 445554432211110000 00011334567788887776666655
Q ss_pred HhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 295 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
.........+.+.|..+ +|.+..+.+.+.+...++.++++ ++.+++.||++||+.+..+.++..++.
T Consensus 218 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 218 AVSGLLLIGLYKPYGQS------LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGM 284 (377)
T ss_pred hHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence 55544454555555433 67888889999999999999988 588999999999998877766655543
No 31
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=1.2e-26 Score=212.29 Aligned_cols=277 Identities=12% Similarity=0.135 Sum_probs=212.8
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
++..+..++..++.........+.+|.+.+++|++.++ .+++.+.+.++..+++++.|++.||+|||+++..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~ 79 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGF 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34555666677777777778888999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~ 198 (371)
++.+++.++++++++++.+++.|++.|++.+...+. ..++.|++|+++|+++++..+....+|..++|.+.+.+...
T Consensus 80 ~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 157 (394)
T PRK03699 80 ALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR-- 157 (394)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 999999999999999999999999999988876664 88999999999999999998888899999999998887641
Q ss_pred CCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccc
Q 017429 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (371)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (371)
.++||.++.+.++..++..+..++ ++.|+.+++++ ++. ++ ..+.
T Consensus 158 -------------~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~---~~~--------------~~----~~~~- 201 (394)
T PRK03699 158 -------------SIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHAP---KAD--------------KP----VAKE- 201 (394)
T ss_pred -------------cccHHHHHHHHHHHHHHHHHHHHh-cCCccccccCc---ccc--------------Cc----cccc-
Confidence 346677667666655544443332 22221111000 000 00 0011
Q ss_pred ccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
..++.++...+..++..........+.|.|+.+. +|+++.+.+.+.+...++..+++ ++.+++.||+++|+.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 202 KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKK-----FGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILT 275 (394)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHH
Confidence 1235566666666666666677788899888665 79999999999999999999988 58899999999998887
Q ss_pred HHHHhhhh
Q 017429 359 IAGVNFEH 366 (371)
Q Consensus 359 ~~~~~~~~ 366 (371)
.+..+..+
T Consensus 276 ~~~~~~~~ 283 (394)
T PRK03699 276 VLAGLALV 283 (394)
T ss_pred HHHHHHHH
Confidence 66554433
No 32
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=1.6e-26 Score=209.98 Aligned_cols=287 Identities=11% Similarity=0.055 Sum_probs=209.4
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHH-hhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
.+|.++..++..++........++..+.+.+ ++|++.+| .+++.+++.+++.++.++.|++.||+|.|+++.+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3467777788888888888888998888876 89999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhH-----HHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhh
Q 017429 118 GTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~ 192 (371)
+.++..+..+..+++ ++++.+++.|++.|++.+...+....+++++|+++||+++|+.....++|..+++++...
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999999999988886 799999999999999855444459999999999999999999976666677665555544
Q ss_pred hcCcCCCCCCccccccccc----CccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhh
Q 017429 193 LAQPAEKYPNLFSSESLFG----KFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (371)
Q Consensus 193 l~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (371)
+.... .-..+||+.... ..+|+...++..+..++..+. ++++++.+. . +.
T Consensus 186 ~i~~~--l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~--~~-------------------- 240 (462)
T PRK15034 186 VIFVP--VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-S--RA-------------------- 240 (462)
T ss_pred HHHHH--HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-c--cc--------------------
Confidence 33100 000233333221 233666555555555544443 444443321 1 00
Q ss_pred cccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017429 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (371)
..+..+..+|+|+.|...+.+++......++..++|.|..+. + +............+...+.+ +++|++
T Consensus 241 ---~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-----~--~~~~~l~~~~l~~l~~~l~r-plgG~L 309 (462)
T PRK15034 241 ---SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-----F--PDVNILRLAFFGPFIGAIAR-SVGGAI 309 (462)
T ss_pred ---CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----c--ChHHHHHHHHHHHHHHHHHH-HhhHHH
Confidence 012345688999999999999999988888988999887653 2 22222222333445666666 689999
Q ss_pred HHHhchhHHHHHHHHhhhhc
Q 017429 348 ERILGPIMVARIAGVNFEHS 367 (371)
Q Consensus 348 ~~r~~~~~~~~~~~~~~~~~ 367 (371)
+||+|+++++..+++...++
T Consensus 310 ADRiG~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 310 SDKFGGVRVTLINFIFMAIF 329 (462)
T ss_pred HHhcCchHHHHHHHHHHHHH
Confidence 99999999998887765554
No 33
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.4e-27 Score=203.44 Aligned_cols=277 Identities=41% Similarity=0.666 Sum_probs=206.0
Q ss_pred cccchhhHHHHHHhhcccccccc--chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHH
Q 017429 57 ISSLFPFLYFMIKDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (371)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (371)
.....++...+.++|+....+.+ ...+.|.+.+.+.+.+++.++.+|.++||+|||++++++++..++...+.+.+.|
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~ 120 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN 120 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666677766544433 6678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCcc
Q 017429 135 FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (371)
Q Consensus 135 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~ 214 (371)
+..++++|++.|+..|-..++.++++|.+++++|+.+++..+.++++|.++||.|||++.... ..++.+.
T Consensus 121 F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~----------~~~g~~p 190 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFS----------SISGSYP 190 (451)
T ss_pred HHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhH----------hhhccCc
Confidence 977888899999999999999999999999999999999999999999999999999998711 1122445
Q ss_pred chhHHHHHHHHHHH-HHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHH
Q 017429 215 YFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (371)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (371)
+..|.++..+.+.. .....+++||+-+.++++ ++.....+..+.+ ++............++|++....+..+..
T Consensus 191 ~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~-~~~~~~~~~~~~~----~~~~~~~~~~~v~~lrn~p~~~~i~~~~i 265 (451)
T KOG2615|consen 191 FALPCLLVFILAAGDVTFFPWFLPETLPLRKRN-DEHSTLQEAADDR----LALLKFARIFKVAALRNPPLLDFISVLRI 265 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccchhhc-ccccchhhhhhhh----hhhcchhhhhhhhhhcCccccchHHHHHH
Confidence 55555555555555 456678999997665554 2111111111111 11011112223345677776666666666
Q ss_pred HHhhhhhHHHHHHHHhcCCCcc--CCccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017429 294 FSLHDMAYSEIFSLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (371)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (371)
+....+.+..+++.|....... +++|+++.+.|.+++..++.+.+.+..+.+++.
T Consensus 266 ~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~ 322 (451)
T KOG2615|consen 266 FGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILP 322 (451)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhcccccc
Confidence 6666677777777776666555 669999999999999999999998865544443
No 34
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=4.5e-26 Score=207.63 Aligned_cols=272 Identities=15% Similarity=0.157 Sum_probs=205.3
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.++.+....++.........+.+|.+.+++|.++.+ .|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~ 79 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4566777888888899999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
+.+++..+++++++++.+++.|++.|++.+...+. ...+.+..++++|+++++..+.+..+|..+||.+++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~--- 156 (381)
T PRK03633 80 IFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE--- 156 (381)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---
Confidence 99999999999999999999999999998887775 77778889999999999999999999999999999998761
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (371)
..+ ...|.. .... ... +..++.+.+++..+ + + ...+.++.+
T Consensus 157 ----~~~-----~~~~~~----~~~~-~~~-~~~~~~~~~~~~~~-~-~----------------------~~~~~~~~~ 197 (381)
T PRK03633 157 ----LMS-----VLPWVT----GLVL-AAI-LPLLFTRILNQQAE-N-H----------------------DSTSIWPML 197 (381)
T ss_pred ----ccc-----hHHHHH----HHHH-HHH-HHHHHhcccCCCCC-C-C----------------------CCCCHHHHH
Confidence 100 112221 1111 111 11122121111100 0 0 011234456
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Q 017429 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (371)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~ 359 (371)
++|.++......+...........++|.|..+ .|.++.+.+.+.+...++.++++. ..+++.||+++|+.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~~~~~~l~~ 270 (381)
T PRK03633 198 KLRQARLGVNGCIISGIVLGSLYGLMPLYLNH------QGMSDASIGFWMALLVSAGILGQW-PIGRLADRFGRLLVLRV 270 (381)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHcCcHHHHHH
Confidence 77776654443443333444556677877754 588888999999999899999984 78999999999998877
Q ss_pred HHHhhhhc
Q 017429 360 AGVNFEHS 367 (371)
Q Consensus 360 ~~~~~~~~ 367 (371)
+.....++
T Consensus 271 ~~~~~~~~ 278 (381)
T PRK03633 271 QVFVVILG 278 (381)
T ss_pred HHHHHHHH
Confidence 66665544
No 35
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=2.7e-26 Score=210.01 Aligned_cols=275 Identities=21% Similarity=0.221 Sum_probs=209.9
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
......+....+.....+.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||+.++.+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH
Confidence 344455566666667778899999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
+.+++..+++++.+++.|++.|++.+...+. ..++.|.+|+++|+++.++.+....+|..++|.+++.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-------- 152 (392)
T PRK10473 81 ASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-------- 152 (392)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 9999999999999999999999998887764 9999999999999999999999999999999999998876
Q ss_pred ccccccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccccc
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
..+|+..+++.++..++.. +..+.+||++++..++++ . ..+..++.++++
T Consensus 153 --------~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~-------------------~~~~~~~~~~~~ 203 (392)
T PRK10473 153 --------KFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAAS--S-------------------KPRENSESLLNR 203 (392)
T ss_pred --------CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--c-------------------hHHHHHHHHhCH
Confidence 4556666666665555443 345666776432211000 0 001123456667
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Q 017429 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (371)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 362 (371)
+++...+...+.......+..+.|.+..+. +|+++.+.+.+....+++.+++. +..+++.||+++|+.+..+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 204 FFLSRLVITTLSVTVILTFVNTSPVLLMEQ-----MGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 666554444443333334444555555443 78899999999999999999988 578999999999998888776
Q ss_pred hhhhcc
Q 017429 363 NFEHSV 368 (371)
Q Consensus 363 ~~~~~~ 368 (371)
+..++.
T Consensus 278 ~~~~~~ 283 (392)
T PRK10473 278 LFLAAG 283 (392)
T ss_pred HHHHHH
Confidence 655443
No 36
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=4.3e-26 Score=214.30 Aligned_cols=307 Identities=14% Similarity=0.071 Sum_probs=203.1
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhh--------ccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF--------QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 111 (371)
.+..+...+..+..+++...+++..|.+.+++ +.+..+ .+++.+++.++..++++++|+++||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~Gr 84 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFGR 84 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34445666777888888899999889888877 666677 9999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhH------------HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhh
Q 017429 112 KPVIIMGTASVVIFNTLFGLS------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (371)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~ 178 (371)
|++++++.++..++.+.++++ +.+..+++.|+++|++.|...+. .++++|++|+++|++++++.+.+
T Consensus 85 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~ 164 (479)
T PRK10077 85 RDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFA 164 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHH
Confidence 999999999998888777653 33567889999999998887775 99999999999999999999999
Q ss_pred hhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhh--hhh
Q 017429 179 WGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDA 256 (371)
Q Consensus 179 ~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~ 256 (371)
..+|..+++.+++.+.....+ .....++||.++++.++..++..+..+++||++++...+++.++.. .++
T Consensus 165 ~~~G~~~~~~~~~~~~~~~~~--------~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~ 236 (479)
T PRK10077 165 IIFGQLVVYFVNYFIARSGDA--------SWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRK 236 (479)
T ss_pred HHHHHHHHHHHHHHHhccCcc--------cccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHH
Confidence 999999998887766531110 0011456777778877777766666778899876432222111110 000
Q ss_pred hhhhhh------hhhhhcccCCccccccccccchHHHHHHHHHHHhh----hhhHHHHHHHHhcCCCccCCccccchhhh
Q 017429 257 LESASA------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH----DMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (371)
Q Consensus 257 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 326 (371)
...... +..+.........+..+.- .............+. ......+.|.+... .|.+....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~------~g~~~~~~~ 309 (479)
T PRK10077 237 IMGNTLATQALQEIKHSLDHGRKTGGKLLMF-GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT------LGASTDIAL 309 (479)
T ss_pred HcCChhHHHHHHHHHHHHHHhhhhhhhhcch-hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH------cCCCCchHH
Confidence 000000 0000000000000111110 001111111111111 11112223433332 577777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
......++..+++. ++.+++.||+|+|+.+..+.++.+++.
T Consensus 310 ~~~~~~~~~~~i~~-~~~g~l~dr~g~r~~~i~~~~~~~v~~ 350 (479)
T PRK10077 310 LQTIIVGVINLTFT-VLAIMTVDKFGRKPLQIIGALGMAIGM 350 (479)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhcChHHHHHhHHHHHHHH
Confidence 77777778888888 588999999999999988887766653
No 37
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=1.2e-26 Score=211.42 Aligned_cols=263 Identities=21% Similarity=0.280 Sum_probs=206.0
Q ss_pred cccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHH
Q 017429 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (371)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (371)
++..+..|.+|.+.+++|.+..+ .++..+++.++..++.++.|+++||+|||+++..+.++.+++.+.+.++++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT 78 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 34456678999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCc
Q 017429 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (371)
Q Consensus 135 ~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~ 213 (371)
++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ .+
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----------------~~ 142 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV----------------WF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hc
Confidence 999999999999998887775 8999999999999999999999999999999999999987 55
Q ss_pred cchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHH
Q 017429 214 PYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 292 (371)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (371)
+|+..+++.++..++.. +..+++||+++++++++.+.+ +.....++.+++++++...+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 143 SWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLR------------------TTIRNFASLFRHKRVLGYMLASG 204 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChH------------------HHHHHHHHHHcChHHHHHHHHHH
Confidence 66777676666655543 445667776432211110000 00113345677787776666555
Q ss_pred HHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHh
Q 017429 293 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVN 363 (371)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~ 363 (371)
+.......+..+.|.+..+. +|+++.+.+.+.....++.++++ ++.+++.||+|+|+.+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~ 269 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIEL-----NGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWI 269 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHH
Confidence 54444444444445554443 68899999999999999999988 5789999999999988776654
No 38
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=1.4e-26 Score=211.49 Aligned_cols=274 Identities=14% Similarity=0.109 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
.+..+++..++..++........+.+.++++.+..+ .+++.+++.+++.++.+++|+++||+|||++++++.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 345566777777776666666667778899998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
.+++.+.+.+..+. ++.|+++|++.+...|+ .+++.|++|+++|++++++.+....+|..+||.++|.+.+
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~----- 149 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD----- 149 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 98888877776664 78899999999998886 9999999999999999999999999999999999999986
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccc
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (371)
. .|+.++.+.+...++..+..+.+||++++.+.++.+.... .+ +. ....+.+++
T Consensus 150 -----------~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~----~~-------~~~~~~l~~ 203 (393)
T PRK11195 150 -----------P-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIAL---LR----DF-------FHACRVLWR 203 (393)
T ss_pred -----------H-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHHH---HH----HH-------HHHHHHHHh
Confidence 1 1444555544444444555667787654322111110000 00 00 012345677
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHH
Q 017429 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (371)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~ 360 (371)
+|.+.......++............+.|.++. +|.++.+.|.+....+++.++++. ..+++.||.++++.+..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----lg~s~~~~G~~~~~~~~g~i~g~~-~~~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA-----LGITLNQPAYLQAVVAIGIAVGAG-AAARLVTLETVLRVLPAG 277 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHhcCCcccchHHHH
Confidence 77766555544444444444555566666655 789999999999999999999984 778888888888766665
Q ss_pred H
Q 017429 361 G 361 (371)
Q Consensus 361 ~ 361 (371)
.
T Consensus 278 ~ 278 (393)
T PRK11195 278 I 278 (393)
T ss_pred H
Confidence 4
No 39
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=1.9e-27 Score=227.54 Aligned_cols=308 Identities=16% Similarity=0.134 Sum_probs=229.6
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
...+..+...+..+...+.++.+.++|+++..+ .|++.+.+.+++.++.++.|+++||+|||+.+.++.+++++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 334455566666677788889999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHH---------------------------------------------------HHHHHHHHHHHHhhhccchh
Q 017429 125 FNTLFGLSV---------------------------------------------------NFWMAVLTRFLLGSLNGLLG 153 (371)
Q Consensus 125 ~~~~~~~~~---------------------------------------------------~~~~~~~~r~l~G~~~~~~~ 153 (371)
+.+++++++ .+..++++|+++|+|.+...
T Consensus 111 g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~ 190 (633)
T TIGR00805 111 GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF 190 (633)
T ss_pred HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch
Confidence 999988764 24567899999999999988
Q ss_pred HH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc---------ccccccccCccchhHHHHHH
Q 017429 154 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL---------FSSESLFGKFPYFLPCLCIS 223 (371)
Q Consensus 154 ~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~ 223 (371)
+. .+++.|++|+++|++++++++.+..+|..+|+++++++.+...+|+.. ..+|| ..+||..|++.+
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprW---iGaWwl~Fli~g 267 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW---IGAWWIGFLICG 267 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccH---HHHHHHHHHHHH
Confidence 86 999999999999999999999999999999999999988643222110 11111 234888888888
Q ss_pred HHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhh----hhhhhhcccCCccccccccccchHHHHHHHHHHHhhhh
Q 017429 224 LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESAS----AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 299 (371)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (371)
++.++..+.++++|++.++...+.+.+....++.++.. ....+...+.....+.+++||.++...+..++......
T Consensus 268 ~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 347 (633)
T TIGR00805 268 GVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFN 347 (633)
T ss_pred HHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 77777666667777654322111100000000000000 00000011122346678999999999999999988989
Q ss_pred hHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHH-HHHHHHHHHHHHHHHhc--hhHHHHHHHHhhhhc
Q 017429 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFS-LLVFQLSLYPFLERILG--PIMVARIAGVNFEHS 367 (371)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~l~~r~~--~~~~~~~~~~~~~~~ 367 (371)
++..++|.|++.. +|+++.+++.+.....+. .+++. ++++++.||++ .|+.+.+++++..++
T Consensus 348 ~~~~~lP~yl~~~-----~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 348 GYITFLPKYLENQ-----YGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHHH-----cCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 9999999999877 899999999998887764 45555 68899999887 556776666665555
No 40
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=4e-26 Score=211.42 Aligned_cols=283 Identities=16% Similarity=0.118 Sum_probs=195.3
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHH-HHH-----HHHHHHHHhHHHHhhhhhcCCch
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV-GSS-----FMFGRALTSVFWGLVADRYGRKP 113 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~g~l~dr~Grr~ 113 (371)
++.....++..++..++...++...|.+.++++.++.+ .+.. .+. ..++..+++++.|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~ 87 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRK 87 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHH
Confidence 44566788899999999999999999999999988776 4433 222 23333578899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHH--------HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHh
Q 017429 114 VIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI 184 (371)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (371)
+++.+.++..++.++++++++++ .+++.|+++|++.+...+. ..+++|++|+++|++++++.+.+..+|..
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999988876 4689999999998887774 89999999999999999999988888888
Q ss_pred HHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhh
Q 017429 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV 264 (371)
Q Consensus 185 ~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (371)
+++.+++.+.....++ .. ..++||.++++..+...+........||+++...++
T Consensus 168 ~g~~~g~~l~~~~~~~-------~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~------------------ 221 (434)
T PRK15075 168 FAALLGYLLNQWLSPA-------QM-AEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK------------------ 221 (434)
T ss_pred HHHHHHHHHHHhCCHH-------HH-hccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh------------------
Confidence 8888887764311000 00 045677777765433222222222223321100000
Q ss_pred hhhcccCCccccccccccchHHH-HHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHH
Q 017429 265 KEEEGREATPKKSLLKNWPLMSS-IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 343 (371)
++.+.....+...++++.+.. ....++..........+.|.|+++. +|++..+.++......++.+++. ++
T Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~ 293 (434)
T PRK15075 222 --HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-----LHLSAADSLLVTLCVGVSNFIWL-PI 293 (434)
T ss_pred --hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HH
Confidence 000001112223334433332 2233333344455666788887765 68888888888888888888888 58
Q ss_pred HHHHHHHhchhHHHHHHHH
Q 017429 344 YPFLERILGPIMVARIAGV 362 (371)
Q Consensus 344 ~~~l~~r~~~~~~~~~~~~ 362 (371)
.+++.||++||+....+.+
T Consensus 294 ~g~l~Dr~g~r~~~~~~~~ 312 (434)
T PRK15075 294 GGALSDRIGRRPVLIAFTV 312 (434)
T ss_pred HHHHHHHhcchHHHHHHHH
Confidence 8999999999998766543
No 41
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=1e-26 Score=218.16 Aligned_cols=294 Identities=19% Similarity=0.162 Sum_probs=201.0
Q ss_pred HHHHHHHhhcccccchhhHHHHHHhhccc--------cccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLYFMIKDFQIA--------KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
..+..++..++.....+..+.+..+++.+ ..+ .+++.+++.++..+++++.|+++||+|||++++.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 33 AAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSL------WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhH------HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 33344556667777888888888888777 555 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhH---HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh---
Q 017429 118 GTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--- 190 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~--- 190 (371)
+.++..++.+++.+. .+++.+++.|++.|++.+...+. ..+++|++|+++|++++++.+.+..+|..+++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999998888554 34568999999999998888775 99999999999999999999999999999999998
Q ss_pred hhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhh--hhhh----------
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALE---------- 258 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~---------- 258 (371)
+...+ ..+|+.++.+.++..++.++..+++||+++....+++.++... ++..
T Consensus 187 ~~~~~----------------~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (481)
T TIGR00879 187 VSLNN----------------TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELL 250 (481)
T ss_pred hcCCC----------------CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHH
Confidence 54444 5567777777666666666667788988653211111111000 0000
Q ss_pred h----hhhhhhhhcccCCccccccccc------cchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHH
Q 017429 259 S----ASAEVKEEEGREATPKKSLLKN------WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEV 328 (371)
Q Consensus 259 ~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 328 (371)
+ .......+.......+.+.++. +.++...+..+...........+.+.+... .|++..+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 324 (481)
T TIGR00879 251 DELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN------AGVSTDHAFLV 324 (481)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH------cCCCchHHHHH
Confidence 0 0000000000001112222221 112222222222222223334445555433 68888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 329 LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
.....++.+++. ++.+++.||+++|+.+..++++.++++
T Consensus 325 ~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 325 SIIVGAVNFAFT-FVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 888888888888 478999999999998887766655543
No 42
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=4.2e-26 Score=211.28 Aligned_cols=291 Identities=16% Similarity=0.132 Sum_probs=195.4
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHH-HHHhh--ccccccccchhh-hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDF--QIAKREEDIGSY-AGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~ 116 (371)
+.+....+..+++.++........|. +.+++ +.++.+ +.. .....++..++..+++++.|+++||+|||++++
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 44556667788888888887777764 44555 454432 110 111224556778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHH--------HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHH
Q 017429 117 MGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (371)
.+.++++++.+++++++++. .+++.|+++|++.|...+. ..++.|++|+++|++..+..+.+..+|..+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876 5888999999998887775 99999999999999999999999999998888
Q ss_pred hhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhh
Q 017429 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (371)
Q Consensus 188 ~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (371)
.+...+.....+ ..+..++||.++++.++..++........||++++...+.+.+ +.
T Consensus 179 ~~~~~l~~~~~~--------~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~---------------~~ 235 (438)
T PRK09952 179 GLVSLISMMTTD--------EQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA---------------AA 235 (438)
T ss_pred HHHHHHHHhCCH--------HHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc---------------cc
Confidence 777766531110 0011467888888877765554444445666653211110000 00
Q ss_pred cccCCccccccccccchHHHHH-HHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017429 268 EGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
+++ ....+.++++++.+.... ..++.....+....+.|.|..+. +|++......+....++..+++. ++.++
T Consensus 236 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-----~g~s~~~~~~~~~~~g~~~~i~~-~~~g~ 308 (438)
T PRK09952 236 KKR-IPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQN-----LGLPRELFLNIGLLVGGLSCLTI-PCFAW 308 (438)
T ss_pred ccc-CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 000 011123456666555443 33333444555666777777654 67777665555555566666666 57899
Q ss_pred HHHHhchhHHHHHHHHhh
Q 017429 347 LERILGPIMVARIAGVNF 364 (371)
Q Consensus 347 l~~r~~~~~~~~~~~~~~ 364 (371)
+.||++||+.+..+.++.
T Consensus 309 l~Dr~grr~~~~~~~~~~ 326 (438)
T PRK09952 309 LADRFGRRRVYITGALIG 326 (438)
T ss_pred HHHHhCchHHHHHHHHHH
Confidence 999999999887765543
No 43
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=8.7e-27 Score=202.44 Aligned_cols=285 Identities=14% Similarity=0.149 Sum_probs=235.2
Q ss_pred CCChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH
Q 017429 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (371)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~ 116 (371)
+...+.++..+++..+..+...+..+..+.+.+++|+|+.| .+++.++..+...+..++.|.+.||+|.|++..
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 34557777777777788888888889999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHH---HHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 117 MGTASVVIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
++.++..+.++..+++. +++++++.+++.|++.+.+.+....+++++|+|++|.++|+.. ..++|..+...++..+
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 99999999999988865 4459999999999999998888999999999999999999998 8888988888888888
Q ss_pred cCcCCCCCCcccccccccCccchhHHHHHHHHHHH-HHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCC
Q 017429 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (371)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (371)
.. .+|+. .|+....+..+..++ .++.++.+.|.+..+...++.. +
T Consensus 163 ~~-------~~g~~------~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~ 208 (417)
T COG2223 163 AV-------AFGFL------AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------P 208 (417)
T ss_pred HH-------HHhhH------HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------h
Confidence 76 22200 155554444444444 4555666766665322211110 0
Q ss_pred ccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017429 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (371)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~ 352 (371)
...+.++++++.|...+.|+.......++..++|.|+.+. ++.++.++|.....+.+.+.+.+ +++|+++||+|
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~G 282 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIG 282 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHH-hccchhhhhcc
Confidence 2456678899999999999999999999999999999998 89999999999999999999999 69999999999
Q ss_pred hhHHHHHHHHhhhhcc
Q 017429 353 PIMVARIAGVNFEHSV 368 (371)
Q Consensus 353 ~~~~~~~~~~~~~~~~ 368 (371)
.++.+...+..++++.
T Consensus 283 g~rv~~~~f~~~~~~~ 298 (417)
T COG2223 283 GRRVTLAVFVGMALAA 298 (417)
T ss_pred chhHHHHHHHHHHHHH
Confidence 9999888777766554
No 44
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=2.1e-26 Score=215.34 Aligned_cols=284 Identities=13% Similarity=0.144 Sum_probs=212.7
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHH----------------------hhccccccccchhhhHHHHHHHHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIK----------------------DFQIAKREEDIGSYAGYVGSSFMFGRA 96 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (371)
++.....++++......+....+...+.+.+ +++++..+ .|++.+++.+++.
T Consensus 17 r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~ 90 (465)
T TIGR00894 17 RLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGAL------QGLILSSHFYGQI 90 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHH------hhHHHHHHHHHHH
Confidence 3344445555666666666555555555544 67777777 9999999999999
Q ss_pred HHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhH
Q 017429 97 LTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLS 173 (371)
Q Consensus 97 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~ 173 (371)
+++++.|+++||+|||+++..+.++.+++.+++.++ .+++.+++.|+++|++.+...+. ..+++|++|+++|+++++
T Consensus 91 ~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 91 IIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 999999999999999999999999998888776544 45788999999999999988886 999999999999999999
Q ss_pred hhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccC-ccchhHHHHHHHHHHHHHHHHh-hccccccCCCCCCccch
Q 017429 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK-FPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCD 251 (371)
Q Consensus 174 ~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~ 251 (371)
+...+..+|..++|.+++.+.+ . .+|+.++++.++..++..+.++ +.+|+|+..+...++
T Consensus 171 ~~~~~~~~g~~i~~~l~~~l~~----------------~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-- 232 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPISGWLCE----------------SWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKF-- 232 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----------------ccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHH--
Confidence 9999999999999999999987 3 2556666777766665555444 445555332211111
Q ss_pred hhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHH
Q 017429 252 VSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAI 331 (371)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 331 (371)
.++..++.. +.++++.+.+..++++++++.++...+..++.......+..++|.|+.+. +|++..+.++..+.
T Consensus 233 -~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~g~~~~~ 305 (465)
T TIGR00894 233 -EKKYINSSL-QGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWV-----LRVSGKENGLLSSL 305 (465)
T ss_pred -HHHHHHhhc-ccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcChHHhHHHHHH
Confidence 101111100 00011111234577889999999999988888888888888999998766 78999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhchh
Q 017429 332 TGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 332 ~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
..++..++. ++.+++.||.++|
T Consensus 306 ~~~~~~i~~-~~~g~l~d~~~~~ 327 (465)
T TIGR00894 306 PYLFAWLCS-IFAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHc
Confidence 899998888 4889999987544
No 45
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=1.7e-26 Score=217.73 Aligned_cols=199 Identities=16% Similarity=0.143 Sum_probs=155.3
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhh-----ccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF-----QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 114 (371)
++.+....+..+..+++....+...|.+.+++ +.+..+ .+++.+.+.++..+++++.|+++||+|||++
T Consensus 15 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~ 88 (502)
T TIGR00887 15 FRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSV------SAAVNGSASIGTLAGQLFFGWLADKLGRKRV 88 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 34444666777888888888888888776643 122333 7899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHH
Q 017429 115 IIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (371)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (371)
+.++.++..++.++++++++ ++.+++.|++.|++.|...+. ..+++|++|+++|++++++.+....+|..+++
T Consensus 89 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 89 YGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988887654 788999999999998887775 99999999999999999999999999999999
Q ss_pred hhhhhhcCcCCC---CCC---ccccccc-ccCccchhHHHHHHHHHHHHHHHHhhccccccCCC
Q 017429 188 ALGGFLAQPAEK---YPN---LFSSESL-FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (371)
Q Consensus 188 ~i~~~l~~~~~~---~~~---~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (371)
.++..+.....+ .+. ...++.. ...++||.++.+.++.+++..+..+++||+|++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~ 232 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTA 232 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 988776431110 000 0000000 01357899888888888777777889999998744
No 46
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=1.9e-25 Score=205.08 Aligned_cols=266 Identities=17% Similarity=0.191 Sum_probs=206.1
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
...+...+..+....+.|.+|.+.+++|.++.+ .++..+++.++..++++++|+++||+|||+.+..+.++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 83 (401)
T PRK11043 10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFAL 83 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHH
Confidence 334345555566777888889999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
+.+++.++++++.+++.|++.|++.+...+. .+++.|.+|++++++..+.......+|..++|.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------- 155 (401)
T PRK11043 84 GSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN-------- 155 (401)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 9999999999999999999999987776665 8899999999999999999888889999999999999987
Q ss_pred ccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccc
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (371)
.++|+..+++.++..++..+..++++|++++.+++ + .+..+++++++++
T Consensus 156 --------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~~~ 204 (401)
T PRK11043 156 --------HFGWQAIFATLFAITLLLILPTLRLKPSKKARKQS----Q-------------------DALTFKQLLKSKT 204 (401)
T ss_pred --------cCChHHHHHHHHHHHHHHHHHHHHcCCCCCccccc----h-------------------HHHHHHHHHcChh
Confidence 55677766777666666555555565543211100 0 0123456677777
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Q 017429 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (371)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 362 (371)
++...+...+.......+..+.|.+..+ +|+++.+.++......++.+++. ...+++.||+++|+....+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~~ 276 (401)
T PRK11043 205 YLGNVLIFAACSAAFFAWLTGSPFILEQ------MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLLV 276 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHH
Confidence 7665555555444555566667766643 68899999988888888888887 477899999998886544433
No 47
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.94 E-value=2.2e-25 Score=210.43 Aligned_cols=300 Identities=15% Similarity=0.164 Sum_probs=210.9
Q ss_pred CChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
.+++.+..+++..++..++.....+..|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3455666788888888888888889999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
+.++.+++.+++.++++++.+++.|++.|++.+...+. ..++.|.+|+++|++++++...+..+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 169 (496)
T PRK03893 91 SIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP- 169 (496)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999999999999999999999999987776664 8999999999999999999999999999999999999987
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhh--hhhhhhhhhhhhhh-------
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALESASAEVKEE------- 267 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------- 267 (371)
.++|+..+.+..+..++.++.....||++++..+++++.+.. .+............
T Consensus 170 ---------------~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (496)
T PRK03893 170 ---------------VWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAA 234 (496)
T ss_pred ---------------cCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHH
Confidence 555666656554444444444455676543221111110000 00000000000000
Q ss_pred -------cccCCccc-------------------cccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCcccc
Q 017429 268 -------EGREATPK-------------------KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (371)
Q Consensus 268 -------~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 321 (371)
.......+ ....+.+......+..+...........++|.|+... +|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~~ 309 (496)
T PRK03893 235 AALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD-----LGYD 309 (496)
T ss_pred HHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh-----cCCC
Confidence 00000000 0000001111111111111222223456778887654 7999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhh
Q 017429 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFE 365 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~ 365 (371)
..+++.+.+...++.+++. ++.+++.||+++|+.+..+..+..
T Consensus 310 ~~~~g~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~~~~~~ 352 (496)
T PRK03893 310 PHTVANVLFFSGFGAAVGC-CVGGFLGDWLGTRKAYVCSLLISQ 352 (496)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999999999999999988 588999999999988777665443
No 48
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=8.5e-26 Score=206.98 Aligned_cols=292 Identities=18% Similarity=0.241 Sum_probs=203.2
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
++.+....+..+..........+..|.+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 34444555566666666677778889999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~ 198 (371)
++..++.++..+.++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--- 166 (398)
T TIGR00895 90 LLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP--- 166 (398)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh---
Confidence 999999999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred CCCCcccccccccCccchhHHHHHHHHH-HHHHHHHhhccccccCCCCCCccc-hhhhhhhhhhhhhh-----hhhcc--
Q 017429 199 KYPNLFSSESLFGKFPYFLPCLCISLFA-FGVTIAAFWLPETLHRHNDDDDSC-DVSYDALESASAEV-----KEEEG-- 269 (371)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~-- 269 (371)
.++|+..+++.++.. +..++...++||+++...+++++. ....++.+.....+ .+++.
T Consensus 167 -------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T TIGR00895 167 -------------VFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQ 233 (398)
T ss_pred -------------cccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccccccccc
Confidence 334444445554333 334445667788764322221111 00000000000000 00000
Q ss_pred cCCcc-cccccccc---chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017429 270 REATP-KKSLLKNW---PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (371)
Q Consensus 270 ~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
...+. .+.+++++ ..+......++..........+.|.+... +|+++.+.+.......++.+++. ++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 306 (398)
T TIGR00895 234 GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE------LGFSLSLAATGGALFNFGGVIGS-IIFG 306 (398)
T ss_pred chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 00111 11122222 22223333334444444455566644433 68899999999999999999988 5889
Q ss_pred HHHHHhchhHHHHHH
Q 017429 346 FLERILGPIMVARIA 360 (371)
Q Consensus 346 ~l~~r~~~~~~~~~~ 360 (371)
++.||+++|+.+...
T Consensus 307 ~l~~~~~~~~~~~~~ 321 (398)
T TIGR00895 307 WLADRLGPRVTALLL 321 (398)
T ss_pred HHHhhcchHHHHHHH
Confidence 999999998554433
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=3.5e-25 Score=203.11 Aligned_cols=273 Identities=14% Similarity=0.154 Sum_probs=200.5
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.+...+++.++.....+...+.++.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~ 86 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLL 86 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4556677777777777777777888888999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---h-HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHH-hHHHhhhhhhc
Q 017429 121 SVVIFNTLFG---L-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGFLA 194 (371)
Q Consensus 121 ~~~~~~~~~~---~-~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~i~~~l~ 194 (371)
+.+++.+++. . .++++.+++.|++.|++.+...+. ...+.|.+|+++|++++|+.+.+.++|. .++|.+++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~ 166 (402)
T TIGR00897 87 LWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI 166 (402)
T ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9888876553 2 257888899999999987766654 7888899999999999999999999996 68999999888
Q ss_pred CcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcc
Q 017429 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (371)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (371)
+ .+||+..+ |+..+.. .+..++..+..++.++.+..+ ++.+ ..+..+.
T Consensus 167 ~-------~~g~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~----------------~~~~~~~ 214 (402)
T TIGR00897 167 P-------AFGEMNTL----WSALAFV----LTGGVIALFSNKDIFTPQHMQ-TREK----------------FSELGKA 214 (402)
T ss_pred c-------ccchHHHH----HHHHHHH----HHHHHHHHhccCCCCCccccc-CCcc----------------hhhHHHH
Confidence 7 23332211 2222211 111222333344432111100 0000 0000123
Q ss_pred ccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
++.++++|+++...+..++......+...+.|.|..+ +|+++.+.+.+.+...++..++. +..+++.||+++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~ 287 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE------LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWM 287 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcch
Confidence 4567889998887777777777777778888888754 68899999998888889999988 4789999999988
Q ss_pred HHHH
Q 017429 355 MVAR 358 (371)
Q Consensus 355 ~~~~ 358 (371)
+.+.
T Consensus 288 ~~~~ 291 (402)
T TIGR00897 288 NTVR 291 (402)
T ss_pred hHHH
Confidence 7653
No 50
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.94 E-value=5.4e-25 Score=201.54 Aligned_cols=295 Identities=13% Similarity=0.054 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
.+..++...+..++..+...+.+|.+++++|.+..+ .|++.+.+.+++.+++++.|++.||+|||+.++.+.++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 345667777788888888899999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh---HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 122 VVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 122 ~~~~~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
.+++.+++.. .++++.+++.|++.|++.|...+. .+++.+..|+++|++.+++.+...++|..++|.+++.+....
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999887644 357899999999999999988775 899999999999999999999999999999999999886421
Q ss_pred CCCCCc-ccccc---------cccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhh
Q 017429 198 EKYPNL-FSSES---------LFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (371)
Q Consensus 198 ~~~~~~-~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (371)
.+.... .-+.. .-...+|+.++++.++..++..+...+.++++.+. ++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~--~~~~------------------ 217 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH--SDAK------------------ 217 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--cccc------------------
Confidence 000000 00000 00023588888777766555444333332211110 0000
Q ss_pred cccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017429 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (371)
+.+.....++++++|.++...+..+++...+.+..++++.|..+.. .+.+....+...+.......+++ ++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~----~~~~~~~a~~~~~~~~~~~~vGR-~~~~~l 292 (410)
T TIGR00885 218 QISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLI----PGMTAGFAANYNIGAMVIFFISR-FIGTWL 292 (410)
T ss_pred cccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 0000113346778888888888888888888777788888875421 24444555555666666777888 588999
Q ss_pred HHHhchhHHHHHHHHhhhhc
Q 017429 348 ERILGPIMVARIAGVNFEHS 367 (371)
Q Consensus 348 ~~r~~~~~~~~~~~~~~~~~ 367 (371)
.||+++|+.+..+.++.+++
T Consensus 293 ~~r~~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 293 ISYLAAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHcCHHHHHHHHHHHHHHH
Confidence 99999999887766655444
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=3.5e-25 Score=202.86 Aligned_cols=266 Identities=16% Similarity=0.252 Sum_probs=203.7
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
+++.++......++..+......|.+|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~ 79 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVG 79 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHH
Confidence 456666566666666677777888899999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
.++..++.+++.+.++++.+++.|++.|++.+...+. ..+..|.+++++|+++.+..+.+..+|..++|.+++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-- 157 (394)
T PRK11652 80 MSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-- 157 (394)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999988877675 7888999999999999999999999999999999999987
Q ss_pred CCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccc
Q 017429 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (371)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
.++|+..+.+.++..++. ++..++.||+++.++++. + ....++
T Consensus 158 --------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~~ 201 (394)
T PRK11652 158 --------------LFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRT---R-------------------VLASYR 201 (394)
T ss_pred --------------ccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchh---H-------------------HHHHHH
Confidence 556677667766555443 334556777643221110 0 012344
Q ss_pred ccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
+.+++|.++...+..+........+....+.+..+. +|+++.+.+++.....++.+++. .+.+++.||.+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~ 273 (394)
T PRK11652 202 TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAV-----LGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTL 273 (394)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 566777776655544444433344444455555444 78899999998888777777777 4778888888743
No 52
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.94 E-value=7.6e-27 Score=204.36 Aligned_cols=283 Identities=17% Similarity=0.130 Sum_probs=212.7
Q ss_pred cccCCChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCch
Q 017429 34 TKSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP 113 (371)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~ 113 (371)
...+.+++.+..+++..++..++.+.+....+.+.+.+|++++. .|++.+.+.+++.+++|++|+++||+.||+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~ 99 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKR 99 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcce
Confidence 34455667777889999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhh
Q 017429 114 VIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (371)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~ 192 (371)
++.+|..++.++.+.++++..+|++.++|.+.|+|.+.+.++ +++++|.+|.++|++++++++.+..+|..+|.+.++.
T Consensus 100 v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 100 VIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred EEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 999999999999999999999999999999999999999886 9999999999999999999999999999999999998
Q ss_pred hcCcCCCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccC
Q 017429 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (371)
Q Consensus 193 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (371)
+... .+ .||+.+...+++.++. ++..++.+|+++...++.+.+... .......
T Consensus 180 va~~-------~~--------~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~ 233 (493)
T KOG1330|consen 180 VASL-------TF--------WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSV 233 (493)
T ss_pred eccC-------cc--------ceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC-----------CCCccch
Confidence 8873 22 1344445556666554 445666777665433322211110 0011122
Q ss_pred CccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017429 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (371)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~ 351 (371)
.++.+.+.+++.+....+.+....+...++.-+.|.+.+..+.. .|++..+...+..+...++.++. ++++.+.||+
T Consensus 234 ~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~ 310 (493)
T KOG1330|consen 234 WKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKL 310 (493)
T ss_pred HHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHH--hCCccccchhhhhHHHhhchhhh-eehHHHHHHH
Confidence 33444555666666666666655555555555555554443333 34556666666666666777766 4778888874
No 53
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.94 E-value=1.9e-25 Score=207.97 Aligned_cols=276 Identities=11% Similarity=0.038 Sum_probs=195.7
Q ss_pred HHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 017429 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (371)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (371)
......+.........|.+.++ |++..+ .++..+.+.++..+++++.|+++||+|||++++++.++.+++.++
T Consensus 37 ~~~~~~~~~~~~~~~~p~l~~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~ 109 (452)
T PRK11273 37 GYAAYYLVRKNFALAMPYLVEQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF 109 (452)
T ss_pred HHHHHHHHHHHHHHhhHHHHHc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHH
Confidence 3333344444456677888877 999999 999999999999999999999999999999999999999999888
Q ss_pred HHhHH----HHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHh-HHHhhhhhhcCcCCCCCC
Q 017429 129 FGLSV----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPAEKYPN 202 (371)
Q Consensus 129 ~~~~~----~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~i~~~l~~~~~~~~~ 202 (371)
+++.+ +++.+++.|++.|++.+...+ ....+.|++|+++|++++++.+.+..+|.. .+|+++..+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~------- 182 (452)
T PRK11273 110 MGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW------- 182 (452)
T ss_pred HHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-------
Confidence 87753 678889999999998887766 478889999999999999999999988864 45555433332
Q ss_pred cccccccccCccchhHHHHHHHHHHH-HHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcc-cccccc
Q 017429 203 LFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKSLLK 280 (371)
Q Consensus 203 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 280 (371)
..+|+..+++.+++.++ .++..+++||+++....++++ +.. ++.+....+.++++.+.... .+..++
T Consensus 183 ---------~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (452)
T PRK11273 183 ---------FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIE-EYK-NDYPDDYNEKHEQELTAKQIFMQYVLP 251 (452)
T ss_pred ---------hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChh-hhh-hccccccccccCCCccHHHHHHHHHHc
Confidence 23566666776655554 345567778876542211111 000 00000000000000000111 123678
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh--chhH
Q 017429 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIM 355 (371)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~--~~~~ 355 (371)
++.+|...+..++..........++|.|+.+. .|++..+++.......++.+++. ++.+++.||+ +||.
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 252 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRG 322 (452)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcc
Confidence 88888888887777777777788999998776 68888899988888888888888 5889999998 4443
No 54
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.1e-25 Score=200.70 Aligned_cols=285 Identities=20% Similarity=0.219 Sum_probs=206.8
Q ss_pred HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHH
Q 017429 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFL 144 (371)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l 144 (371)
.+++|.+.++++.....+.+.+++.+|.++|+.+.|.++||+|||..+.++.++..++.+++.+ .+++..++++|++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i 125 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLI 125 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3567766666667777999999999999999999999999999999999998888887776665 5788999999999
Q ss_pred HhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHH
Q 017429 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (371)
Q Consensus 145 ~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 223 (371)
.|+..|..... ..++.|..|++.||....+.+.+..+|.+++..++.--. +|- ...|...+....
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i---------lGt-----~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL---------LGT-----EDLWPYLLAFPL 191 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh---------cCC-----CcchHHHHHHHH
Confidence 99998887775 999999999999999988989999999988866653211 111 334677777788
Q ss_pred HHHHHHHHHHhhccccccCCCC-CCccchhhh------------hhhhhhhhhhhhh--cccCCccccccccccchHHHH
Q 017429 224 LFAFGVTIAAFWLPETLHRHND-DDDSCDVSY------------DALESASAEVKEE--EGREATPKKSLLKNWPLMSSI 288 (371)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 288 (371)
+.+++.++...++||+|++... +++++++.+ ++.+...++.+++ ..+...+.+++++++..+...
T Consensus 192 i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~ 271 (485)
T KOG0569|consen 192 IPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPL 271 (485)
T ss_pred HHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHH
Confidence 8888888899999999998655 333333221 0111111111111 122555778899988776653
Q ss_pred HHHH-HHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhc
Q 017429 289 IVYC-VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHS 367 (371)
Q Consensus 289 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~ 367 (371)
...+ +....++........|. .....+.|++..++-+.....++...+.+ +++.++.||.|||++++.++.+..++
T Consensus 272 ~i~~~v~~~qq~sGi~ai~~Ys--t~i~~~aG~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 272 LIGIVVSFAQQFSGINAIFFYS--TSIFKTAGFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHhcCcceeHHHH--HHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 3332 22222332222222232 22333368999999999999999999998 58999999999999999988887665
Q ss_pred cc
Q 017429 368 VA 369 (371)
Q Consensus 368 ~~ 369 (371)
..
T Consensus 349 ~~ 350 (485)
T KOG0569|consen 349 LL 350 (485)
T ss_pred HH
Confidence 43
No 55
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.94 E-value=1.6e-24 Score=201.50 Aligned_cols=282 Identities=13% Similarity=0.087 Sum_probs=197.9
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
+|..+...++................|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 90 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAG 90 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhh
Confidence 344444444444433344455677889999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHH-HHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 119 TASVVIFNTLFGLSVNFWMAVL-TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~-~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
.++..++.++++++++++.+++ .|++.|++.+...+ ...++.++++ ++|+++.++.+.+..+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~- 168 (455)
T TIGR00892 91 GLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE- 168 (455)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-
Confidence 9999999999999999988865 56899998876544 5778889886 789999999999999999999999999987
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc-cccccCCCCCCccchh-hhhhhhhhhhhhhhhcccCCcc
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDV-SYDALESASAEVKEEEGREATP 274 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 274 (371)
.++|+.++++.+++.++..+..+++ ++.+.+...+.++.+. ..+...+........+...+..
T Consensus 169 ---------------~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (455)
T TIGR00892 169 ---------------SFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFL 233 (455)
T ss_pred ---------------HhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhc
Confidence 5567777777776665544443333 3222111000000000 0000000000000000001111
Q ss_pred ccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (371)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 350 (371)
..+.+++|.++......++..........+++.|..+ .|++..+++.+.+..+++.++++ ++.+++.||
T Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~ 302 (455)
T TIGR00892 234 DFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD------KGVDEYEAAFLLSIIGFVDIFAR-PSCGLIAGL 302 (455)
T ss_pred chHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcc
Confidence 1256788888887777776666666666777877754 58899999999999999999888 477888876
No 56
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=2.6e-25 Score=206.26 Aligned_cols=283 Identities=13% Similarity=0.053 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
.++...+................|.+.+ .|++.++ .++..+++.++..+++++.|+++||+|||+++..+.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~ 100 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHH
Confidence 3334444455555555556666777765 5999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhH----HHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 122 VVIFNTLFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 122 ~~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
.+++.++.+.. ++++.+.+.|++.|++.+...+ ....+.|++|+++|++++++.+.+..+|..++|.+.+.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 101 SAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 88888877654 4677788999999999887766 488899999999999999999999999999998887765431
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCc-c
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-P 274 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 274 (371)
..+|+..+++.++..++. ++..+++||+++....++.++... +..++..++ .+.+.+.+. .
T Consensus 181 ---------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~ 243 (438)
T TIGR00712 181 ---------------FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDDYNEK-AEQELTAKEIF 243 (438)
T ss_pred ---------------hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-ccccccccc-cccccchHHHH
Confidence 345666667766665554 445666787654321111000000 000000000 000000000 1
Q ss_pred ccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
.+..++++.++...+..++......+...+.|.|+.+. .|+++.+++.......+..++++ ++.+++.||.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~ 317 (438)
T TIGR00712 244 MQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFKG 317 (438)
T ss_pred HHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccC
Confidence 12467888888877766666666667778889998875 78999999999999999999988 5889999998543
No 57
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=1e-24 Score=200.08 Aligned_cols=270 Identities=19% Similarity=0.134 Sum_probs=192.0
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
.++.+..+.+..++..++..+..+.+|. +.+++|.++.+ .|++.+++.++..+++++.|+++||+|||++++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF 86 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH
Confidence 3466777888888888888888999986 56889999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhH--------HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHh
Q 017429 118 GTASVVIFNTLFGLS--------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~--------~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (371)
+.++.+++.+.+.++ .+++.+++.|+++|++.+...+. ..++.|++|+++|++++++.+.+..+|..+||.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 166 (399)
T PRK05122 87 GLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP 166 (399)
T ss_pred HHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH
Confidence 998887776655442 25678899999999998887775 888999999999999999999999999999999
Q ss_pred hhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhc
Q 017429 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (371)
Q Consensus 189 i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (371)
+++.+.+ .++|+..+++..+..++..+.....|+.++. ++++
T Consensus 167 l~~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------- 208 (399)
T PRK05122 167 LGVLLYH----------------WGGLAGLGLLIMLLALLGLLLARPRPAVPPV---KGER------------------- 208 (399)
T ss_pred HHHHHHH----------------cccHHHHHHHHHHHHHHHHHHHhcCCCCCCC---Cccc-------------------
Confidence 9999987 5566666565555444333333222322110 0000
Q ss_pred ccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017429 269 GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (371)
.+.++.++ +.+.......+..........+.+.|..+ .|+ ...+...+..+++.+++. +..+++.
T Consensus 209 ----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~-~~~g~l~ 273 (399)
T PRK05122 209 ----LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA------RGW--DGAALALTLFGVAFVGAR-LLFGNLI 273 (399)
T ss_pred ----hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccc--ccchHHHHHHHHHHHHHH-HHHHHHH
Confidence 00111111 11222222222233334445566666543 344 234566677777888877 4788999
Q ss_pred HHhchhHHHHHHHHhhhhc
Q 017429 349 RILGPIMVARIAGVNFEHS 367 (371)
Q Consensus 349 ~r~~~~~~~~~~~~~~~~~ 367 (371)
||+++|+.+..+..+..++
T Consensus 274 ~r~~~~~~~~~~~~~~~~~ 292 (399)
T PRK05122 274 NRLGGLRVAIVSLLVEILG 292 (399)
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 9999999887776655544
No 58
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.94 E-value=1.4e-24 Score=197.43 Aligned_cols=267 Identities=16% Similarity=0.162 Sum_probs=195.4
Q ss_pred HHHHHhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH-HHHHHHHH
Q 017429 48 IIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIF 125 (371)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~ 125 (371)
+..++..++.+...|.+|. +.+++|.++.+ .|++.+++.+...+.+++.|+++||+||||.++. +.+...++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~ 77 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALA 77 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 3456677777788898885 46789999999 9999999999999999999999999999887654 56666677
Q ss_pred HHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhh--hHhhhhhhhhHHhHHHhhhhhhcCcCCCCCC
Q 017429 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (371)
Q Consensus 126 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~ 202 (371)
.++++++++++.+++.|++.|.+.+...|. .++..|..|+++|++. .+....+.++|..+||.+++.+.+
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------- 150 (375)
T TIGR00899 78 CLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------- 150 (375)
T ss_pred HHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-------
Confidence 778888899999999999988876666665 7888898888777654 577778889999999999999987
Q ss_pred cccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccc
Q 017429 203 LFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (371)
Q Consensus 203 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (371)
.++|+.++++.+++.++..+ ..+++||.+++..++.+ ..+.++.+++
T Consensus 151 ---------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 198 (375)
T TIGR00899 151 ---------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----------------------RLEVRGLLAS 198 (375)
T ss_pred ---------hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----------------------cchhhhhhcC
Confidence 56677777887776655544 34557876543211100 0112234566
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHH
Q 017429 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (371)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~ 361 (371)
++++......++...........+|.|..+. +|.++.+.+.+.....+...++. ++.+++.||+++|+.+..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 199 RDTRLLFVACTLMWGCNILYIINMPLLIIHE-----LGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHH
Confidence 6666555544444443344455667666544 68889999988877766666666 57899999999999877665
Q ss_pred Hhhh
Q 017429 362 VNFE 365 (371)
Q Consensus 362 ~~~~ 365 (371)
+...
T Consensus 273 ~~~~ 276 (375)
T TIGR00899 273 LAGV 276 (375)
T ss_pred HHHH
Confidence 5433
No 59
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=1.7e-24 Score=198.21 Aligned_cols=269 Identities=17% Similarity=0.178 Sum_probs=184.4
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+.++.+....++..+..++..|.+|. +.+++|.|..+ .|++.+++.++..+++++.|+++||+|||++++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGM 88 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHH
Confidence 44555666677777777888888885 56899999999 999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHH--------hHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 120 ASVVIFNTLFG--------LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 120 ~~~~~~~~~~~--------~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
+...++.+.+. ..++++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+.+..+|..+||.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~ 168 (392)
T PRK12382 89 LACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG 168 (392)
T ss_pred HHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 87766544322 1357889999999999998877775 88999999999999999999999999999999999
Q ss_pred hhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhccc
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
+.+.+ .++|+..+.+..+..++........||.+++ +++ ++
T Consensus 169 ~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------- 209 (392)
T PRK12382 169 LLLHS----------------HFGFAALALTTMVLPLLAWAFNGTVRKVPAH---AGE-RP------------------- 209 (392)
T ss_pred HHHHh----------------ccChHHHHHHHHHHHHHHHHHHHhccCCCCC---ccc-Cc-------------------
Confidence 99987 5566655554443333322222222332111 000 00
Q ss_pred CCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 350 (371)
+.++..+ .++...+..++..........+.+.|..+ .|++ +.+......+++.++++ +..+++.||
T Consensus 210 ---~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~r 275 (392)
T PRK12382 210 ---SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS------KGWA--MAGFTLTAFGGAFVLMR-VLFGWMPDR 275 (392)
T ss_pred ---hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh------cCCc--hhHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 0011111 11111111222222333444556666543 3443 34555666777777777 578899999
Q ss_pred hchhHHHHHHHHhhhhcc
Q 017429 351 LGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~ 368 (371)
+++|+.+..+..+..++.
T Consensus 276 ~g~~~~~~~~~~~~~~~~ 293 (392)
T PRK12382 276 FGGVKVAIVSLLVETVGL 293 (392)
T ss_pred cCCCeehHHHHHHHHHHH
Confidence 999988877776655543
No 60
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=3e-24 Score=197.64 Aligned_cols=286 Identities=22% Similarity=0.315 Sum_probs=198.9
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.....++..++..+......+.+|.+.+++|.+..+. .....+++.+++.++..+++++.|+++||+|||++++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSA-LNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 34556677788888888888999999999999886541 01124888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
..+++.+++...++++.+++.|++.|++.+.......++.|.+|+++|+++.++......+|..++|.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 167 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD----- 167 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999888889999999999999999766554457888999999999999999999999999999999999987
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccc
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (371)
.++|+..+.+.++..++..+ ..+++||+++..++++ . ... ....+.+
T Consensus 168 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-------------------~~~~~~~ 215 (408)
T PRK09874 168 -----------SYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-M-LHM-------------------REVVTSL 215 (408)
T ss_pred -----------HhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-h-hHH-------------------HHHHHhC
Confidence 45566666666665554443 3455666532211100 0 000 0112334
Q ss_pred cccchHHHHH-HHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 280 KNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
++++++.... ...+..........+++.|..+... ..+......+.+....+++.+++. +..+++.||+++|+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAG--NVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKILI 292 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhHH
Confidence 5565544332 2233333333444556666544210 001011234555666677777777 47789999999999887
Q ss_pred HHHHhhhhc
Q 017429 359 IAGVNFEHS 367 (371)
Q Consensus 359 ~~~~~~~~~ 367 (371)
.+.....++
T Consensus 293 ~~~~~~~~~ 301 (408)
T PRK09874 293 TALIFSVLL 301 (408)
T ss_pred HHHHHHHHH
Confidence 776655443
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=2.5e-24 Score=194.37 Aligned_cols=262 Identities=14% Similarity=0.055 Sum_probs=197.2
Q ss_pred hcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHH
Q 017429 54 ALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (371)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 133 (371)
........+.+|.+.+++|.+.++ .++..+++.++..+++++.|+++||+|||+++.++.++..++.+.+ ..+
T Consensus 13 ~~~~~~~~~~lp~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 13 RPALTSVGPLLPQIRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred cCccccCcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 334466788999999999999999 9999999999999999999999999999999999998888887777 678
Q ss_pred HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccC
Q 017429 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (371)
Q Consensus 134 ~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~ 212 (371)
+.+.+++.|++.|++.+...+. ..++.|.+| ++|++++++.+.+..+|..+++.+++.+.+. . .
T Consensus 86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~-------~-------~ 150 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQH-------S-------G 150 (355)
T ss_pred cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------h-------h
Confidence 8899999999999998876664 778888886 5799999999999999999999999888761 1 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHH
Q 017429 213 FPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 292 (371)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (371)
.+|+..+...++..++.. ..++|+.+++.++++ .......++.+++|.++...+..+
T Consensus 151 ~~w~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 151 GHWQQALAWWALPALLAL--LAWIPQVRRRVAANQ---------------------TTTRLTPVRIWRSPLAWQVTVFFG 207 (355)
T ss_pred hhHHHHHHHHHHHHHHHH--HHHhhhhccccCCCC---------------------CCCCCCCchhhcCHhHHHHHHHHH
Confidence 125655555444333222 233454432111100 001123456778888877766666
Q ss_pred HHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHhhhhc
Q 017429 293 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVNFEHS 367 (371)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~~~~~~~~~~~~~~~~ 367 (371)
+..........+.|.|..+ .|+++.+.+.+.+...++.++++ ++.+++.||+ ++|+.+..+.++.+++
T Consensus 208 ~~~~~~~~~~~~lp~~~~~------~g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILIS------HGASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred HHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 6666666777788888754 58899999999999999999999 4788999999 4555655555544443
No 62
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6.2e-25 Score=201.41 Aligned_cols=277 Identities=16% Similarity=0.123 Sum_probs=217.3
Q ss_pred hhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 017429 62 PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLT 141 (371)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (371)
+.+..+.+|.+....+ .+.+.+++.++++++.+++|.+.||++-.+.+....+++.+..++....+|++.+++.
T Consensus 67 a~l~g~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ial 140 (495)
T KOG2533|consen 67 ASLSGLKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIAL 140 (495)
T ss_pred HHHcCCccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3333455788888888 9999999999999999999999999998888888888888888888889999999999
Q ss_pred HHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHH
Q 017429 142 RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCL 220 (371)
Q Consensus 142 r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 220 (371)
|++.|+.++...|. ..+++.++.+++|++.++++.++..+|+++|++++..+... .+.....|||+. |+
T Consensus 141 r~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~-~~~~~~~gW~~~---------Fi 210 (495)
T KOG2533|consen 141 RFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKL-NGSGGLAGWRWL---------FI 210 (495)
T ss_pred HHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhh-cCCCCcCCceee---------hh
Confidence 99999999998886 99999999999999999999999999999999999987552 222224455444 47
Q ss_pred HHHHHHHH-HHHHHhhccccccCCCCCCccch-hhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhh
Q 017429 221 CISLFAFG-VTIAAFWLPETLHRHNDDDDSCD-VSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD 298 (371)
Q Consensus 221 ~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (371)
+.+++.++ .++..+++|+.|.+..-.+++++ ...++.++......+++ ..+..+++.+++|.+|...+..++.....
T Consensus 211 I~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~dp~vw~~~l~~~~~~lv~ 289 (495)
T KOG2533|consen 211 IEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENK-FKWKGFKEALKDPGVWPFSLCYFFLKLVN 289 (495)
T ss_pred HHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccc-cCHHHHHHHHhchhHHHHHHHHHHHhhcc
Confidence 77666665 45667889998875432222211 11122222222222222 45567788999999999999999999999
Q ss_pred hhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH----hchhHHHHHHH
Q 017429 299 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGPIMVARIAG 361 (371)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r----~~~~~~~~~~~ 361 (371)
.++.+++|.|+..- .|++..+++.+.....++++++. ++.+.+.|| .++|.......
T Consensus 290 ~~~~~~lpl~l~~~-----~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~~~~~ 350 (495)
T KOG2533|consen 290 YGFSYWLPLYLKSN-----GGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLFIVFL 350 (495)
T ss_pred ccHHHHHHHHHHcC-----CCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999873 68999999999999999999988 588999999 45554444333
No 63
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=1.1e-24 Score=199.14 Aligned_cols=278 Identities=14% Similarity=0.173 Sum_probs=206.9
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+.++.+.+..++...+.+...+.+|. +.+++|.+..+ .|++.+++.++..+++++.|+++||+|||++++++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 34555666777778888888888875 55789999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~ 198 (371)
++.+++.++.++.++++.+++.|.+.|.+.+...+. ..+..|..|+++|++++++.+...++|..++|.+++.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--- 157 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--- 157 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999988999999999988998888776666665 8999999999999999999999999999999999998863
Q ss_pred CCCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccc
Q 017429 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (371)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (371)
.+|+.++...+++.++.++ ..+++||+++++++++ +. ....++
T Consensus 158 --------------~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~ 201 (395)
T PRK10054 158 --------------QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATET---GS-------------------VWSPSV 201 (395)
T ss_pred --------------hccCcHHHHHHHHHHHHHHHHHHHHhccccccccch---hh-------------------hhhhhh
Confidence 2345555666655555433 3444565432211000 00 011256
Q ss_pred cccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH
Q 017429 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (371)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~ 357 (371)
.+++|+++...+..++.......+..+.+.|.... .+.+.+....+.++....+.....+ ...+++.||.++|+.+
T Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l 277 (395)
T PRK10054 202 LLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPLM 277 (395)
T ss_pred hccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh---cccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhHH
Confidence 77888888777766665555554545556555332 1256677778888888777777766 4667788899999888
Q ss_pred HHHHHhhhhc
Q 017429 358 RIAGVNFEHS 367 (371)
Q Consensus 358 ~~~~~~~~~~ 367 (371)
..++++..++
T Consensus 278 ~~~~~~~~~~ 287 (395)
T PRK10054 278 TAGTLCFVIG 287 (395)
T ss_pred HHHHHHHHHH
Confidence 7777655544
No 64
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=5.8e-25 Score=202.85 Aligned_cols=276 Identities=14% Similarity=0.084 Sum_probs=204.9
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+....++..+......+.+|.+.++++.+..+ .|++.+.+.++..+++++.|+++||+|||+++..+.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGL 94 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHH
Confidence 344445566666677788889999999888888 99999999999999999999999999999999998887777
Q ss_pred HHHHHHh-----HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCC
Q 017429 125 FNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (371)
Q Consensus 125 ~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~ 198 (371)
+.+..+. .++++.+++.|++.|++.+...+. .+++.|++|+++|+++.++.+....+|..+||.+++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~--- 171 (417)
T PRK10489 95 GFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA--- 171 (417)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH---
Confidence 6655432 457888999999999988777665 8899999999999999999999999999999999999987
Q ss_pred CCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccc
Q 017429 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (371)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (371)
..+|++.+.+.++..++..+..+.+||++++.+++++. . + +....++..
T Consensus 172 -------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~-~--------------~~~~~~~~~ 220 (417)
T PRK10489 172 -------------AGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHP---L-R--------------SLLAGFRFL 220 (417)
T ss_pred -------------HHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccc---h-H--------------HHHHHHHHH
Confidence 44555555666666665566666777754322111000 0 0 001123445
Q ss_pred ccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
+++|.++...+..++... ..+...++|.|..+. +|.++.+.|.+.+..+++.+++.. +.+++.||.++++.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~g~~ig~~-~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 221 LASPVVGGIALLGGLLTM-ASAVRVLYPALADEV-----WQMGAAQIGLLYAAVPLGAALGAL-TSGWLAHSARPGLLML 293 (417)
T ss_pred HcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhc-----cCCChhHhHHHHHHHHHHHHHHHH-HHHHhhhccCcchHHH
Confidence 677776555444443322 345566778887765 788999999999999999999884 7889999877777776
Q ss_pred HHHHhhhhc
Q 017429 359 IAGVNFEHS 367 (371)
Q Consensus 359 ~~~~~~~~~ 367 (371)
.+.++..++
T Consensus 294 ~~~~~~~~~ 302 (417)
T PRK10489 294 LSTLGSFLA 302 (417)
T ss_pred HHHHHHHHH
Confidence 665554443
No 65
>TIGR00898 2A0119 cation transport protein.
Probab=99.93 E-value=7.5e-25 Score=207.15 Aligned_cols=272 Identities=16% Similarity=0.201 Sum_probs=192.4
Q ss_pred hhHHHHHHhhccc---cccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHH
Q 017429 62 PFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (371)
Q Consensus 62 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (371)
+..|.+.+|+|++ ..+ .++..+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 5567888999998 667 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchh
Q 017429 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (371)
Q Consensus 139 ~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~ 217 (371)
++.|++.|++.+...+. ..++.|++|+++|+++.++.+.+..+|.+++|.+++.+.+ ||.
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------wr~ 244 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-------------------WRW 244 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-------------------HHH
Confidence 99999999998887775 9999999999999999999999999999999998766542 566
Q ss_pred HHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhh--hhhhhhh----------h--hhhhhcccCCccccccccccc
Q 017429 218 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESAS----------A--EVKEEEGREATPKKSLLKNWP 283 (371)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~ 283 (371)
.+++.++..++..+..+++||++++...+.+.+++.+ ++..+.. . +.++++...+...++++++|.
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPN 324 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChH
Confidence 6677777777666667889999876443332222111 0000000 0 000001111235677888888
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHh
Q 017429 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVN 363 (371)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~ 363 (371)
++...+...+..+.........+.+.. .++.+..... ...++..+++. ++.+++.||+|||+.+..+.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~ 394 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFSYYGLVLDLG------NLGGNIYLDL---FISGLVELPAK-LITLLLIDRLGRRYTMAASLLL 394 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc------ccCCChHHHH---HHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHH
Confidence 777665544433322222112222221 1444433222 33455666666 4778999999999998887766
Q ss_pred hhhcc
Q 017429 364 FEHSV 368 (371)
Q Consensus 364 ~~~~~ 368 (371)
..+++
T Consensus 395 ~~~~~ 399 (505)
T TIGR00898 395 AGVAL 399 (505)
T ss_pred HHHHH
Confidence 55543
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=5.4e-24 Score=194.86 Aligned_cols=270 Identities=17% Similarity=0.206 Sum_probs=198.9
Q ss_pred HHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
+....++.........|+++ ++.+++|.+..+ .|+..+...++..+.+++.|+++||+|||+++..+.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~ 88 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH
Confidence 44555566666666777777 456889999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
+.+.+.+.++++.+++.|++.|++.+...+. .+++.|.+|+++|++++++.+...++|..+||.+++.+.+
T Consensus 89 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-------- 160 (400)
T PRK11646 89 GFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-------- 160 (400)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999988877775 8999999999999999999999999999999999999873
Q ss_pred ccccccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccccc
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
++|+..+++.++..++.. +..++.||.+.. +. + + +....+++.+++|
T Consensus 161 ---------~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~-~-~------------------~~~~~~~~~~~~~ 208 (400)
T PRK11646 161 ---------YDFRLVCATGAVLFVLAAAFNAWLLPAYKLS---TV-R-T------------------PVREGMTRVLRDK 208 (400)
T ss_pred ---------hhHHHHHHHHHHHHHHHHHHHHHhCCccccc---cc-c-h------------------hhHHHHHHHHcCc
Confidence 345566666655544433 334455542210 00 0 0 0011345667788
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Q 017429 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (371)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 362 (371)
+++...+..+...........+.|.|.++. +.++.+.+.+.+..++.......+..++.+||.+.++.+..+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 282 (400)
T PRK11646 209 RFVTYVLTLTGYYMLAVQVMLMLPIMVNDI------AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLL 282 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhHHhh------cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 877655554444333333445667766553 34678888888887777776665666777777776666666665
Q ss_pred hhhhc
Q 017429 363 NFEHS 367 (371)
Q Consensus 363 ~~~~~ 367 (371)
+..++
T Consensus 283 ~~~~~ 287 (400)
T PRK11646 283 IMSLS 287 (400)
T ss_pred HHHHH
Confidence 55444
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=1.1e-23 Score=191.92 Aligned_cols=274 Identities=15% Similarity=0.125 Sum_probs=201.9
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH-HHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT-ASVV 123 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~-~~~~ 123 (371)
.+.+..+......+...|++|.+.+++|.+..+ +|++.+++.+...++++++|+++||+||++...... ....
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 81 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASA 81 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 355566666777788899999999999999999 999999999999999999999999999854432221 1111
Q ss_pred HHH-HHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCC
Q 017429 124 IFN-TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (371)
Q Consensus 124 ~~~-~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~ 201 (371)
+.. ..+..+++++.+++.|.+.|.+.+...|. .++..|. +++|++.++......++|.+++|.+++.+.+
T Consensus 82 l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~------ 153 (382)
T TIGR00902 82 IFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG------ 153 (382)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH------
Confidence 222 23446788999999999999877666665 6666553 5678999999999999999999999999998
Q ss_pred CcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccc
Q 017429 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (371)
Q Consensus 202 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (371)
.++|+..+.+.....++.++ .+.++|++++..++++ + +....+..++++|+
T Consensus 154 ----------~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~l~~ 204 (382)
T TIGR00902 154 ----------MFDEQNILAILTAGLAFMLI-GFLIKPTIPPKDAIPE--D----------------ESQGDSAFIALLKN 204 (382)
T ss_pred ----------HcChhHHHHHHHHHHHHHHH-HHHcCCCCCCCccccc--c----------------ccccchhHHHHHcC
Confidence 55566555555444332222 3333433211111000 0 00111235678899
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHH
Q 017429 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (371)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~ 361 (371)
|+++...+..++.......+..+.|.|.++ .|.++.++|.+++...++.++.. ...+++.||+++|+.+..+.
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~~~ 277 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA------AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLISA 277 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHHHH
Confidence 999998888888888888888888888864 69999999999998888888877 58899999999999998888
Q ss_pred Hhhhhcc
Q 017429 362 VNFEHSV 368 (371)
Q Consensus 362 ~~~~~~~ 368 (371)
+...+..
T Consensus 278 ~~~~~~~ 284 (382)
T TIGR00902 278 IACVGRW 284 (382)
T ss_pred HHHHHHH
Confidence 8876553
No 68
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.4e-24 Score=196.10 Aligned_cols=253 Identities=17% Similarity=0.241 Sum_probs=209.9
Q ss_pred HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHH
Q 017429 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLL 145 (371)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~ 145 (371)
..+++++.++ .+++.++++.|+++++++.|+++||+|-|+++..+.++.++..++.+.+. +++.+++.|+++
T Consensus 65 ~~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lq 138 (466)
T KOG2532|consen 65 AGEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQ 138 (466)
T ss_pred CceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHh
Confidence 3467788888 99999999999999999999999999999999999999999999988864 456789999999
Q ss_pred hhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHH
Q 017429 146 GSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL 224 (371)
Q Consensus 146 G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 224 (371)
|++.|...|+ ..+.+.|.|+++|++..++...+..+|.+++-+++|++.+. .+||+.+|++.++
T Consensus 139 Gl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s---------------~~GW~sifY~~g~ 203 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES---------------SLGWPSIFYVFGI 203 (466)
T ss_pred HHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc---------------CCCCchHHHHHHH
Confidence 9999998886 99999999999999999999999999999999999999982 2566677788888
Q ss_pred HHHHHHHHHh-hccccccCCCCCCccchhhhhhhhhhhhhhhhhcc--cCCccccccccccchHHHHHHHHHHHhhhhhH
Q 017429 225 FAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG--REATPKKSLLKNWPLMSSIIVYCVFSLHDMAY 301 (371)
Q Consensus 225 ~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (371)
.+++..++++ +..|+|.+++.-.+ +|.+.......+++. ..+.+++++++++.+|...+..+...+....+
T Consensus 204 ~g~i~~~~w~~~~~d~P~~h~~is~------~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l 277 (466)
T KOG2532|consen 204 VGLIWFILWFLFYSDSPSKHPNISE------KELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLL 277 (466)
T ss_pred HHHHHHHHHHHHhcCCcccCCCCCH------HHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 8887766544 44555554322211 112222121111111 15778999999999999999999999999999
Q ss_pred HHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhch
Q 017429 302 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (371)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~ 353 (371)
..+.|.|+.+. +|++..+.|++.++..+...+.. ++.+.++||..+
T Consensus 278 ~~y~PtY~~~V-----L~f~v~~~G~~salP~l~~~~~k-~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 278 LTYLPTYLKEV-----LGFDVRETGFLSALPFLAMAIVK-FVAGQLSDRLTF 323 (466)
T ss_pred HHHhhHHHHHH-----hCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhh
Confidence 99999999998 89999999999999999999988 588999998865
No 69
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=8.2e-24 Score=199.58 Aligned_cols=304 Identities=14% Similarity=0.113 Sum_probs=198.6
Q ss_pred HHHHHHhhcc--cccchhhHHHHHHhhccccccccch-hhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHH
Q 017429 47 WIIVLCTALP--ISSLFPFLYFMIKDFQIAKREEDIG-SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (371)
Q Consensus 47 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 123 (371)
.+..+..+.+ .+...+....+.++...+....... ...+++.+...++..+++++.|+++|++|||+.++++.+...
T Consensus 51 ~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~ 130 (513)
T KOG0254|consen 51 ALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFL 130 (513)
T ss_pred HHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3334444443 4555566666655432222211100 125899999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCC
Q 017429 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (371)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~ 202 (371)
++.+++++++|+++++++|++.|+|.|..... +.+++|..|++.||...+..+....+|..++..++....+.
T Consensus 131 iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~------ 204 (513)
T KOG0254|consen 131 IGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV------ 204 (513)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC------
Confidence 99999999999999999999999998887775 99999999999999999999999999999996665544430
Q ss_pred cccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhh--hhhhh------------hh-hhhhhh
Q 017429 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALES------------AS-AEVKEE 267 (371)
Q Consensus 203 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~------------~~-~~~~~~ 267 (371)
.++||.++.+..+.+++..+..+++||+|++..++.+..+... ..+.. .. ....+.
T Consensus 205 ---------~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~ 275 (513)
T KOG0254|consen 205 ---------YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEA 275 (513)
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhh
Confidence 1467888888888888877778999999987655433222211 11110 00 000000
Q ss_pred c-ccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 017429 268 E-GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (371)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
. ......+.++++.....+..+...+..+++.+.......|.... .+..|.+... .......++..+++. .++..
T Consensus 276 ~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i--f~~~g~~~~~-~~~~~~~~~v~~~~t-~~~~~ 351 (513)
T KOG0254|consen 276 EVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTI--FKSAGLKSDT-FLASIILGVVNFLGT-LVATY 351 (513)
T ss_pred hcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHH--HHhcCCCCch-HHHHHHHHHHHHHHH-HHHHH
Confidence 0 11111233444422333344444444444443333333333332 2223444332 333344445555555 35688
Q ss_pred HHHHhchhHHHHHHHHhhhhccc
Q 017429 347 LERILGPIMVARIAGVNFEHSVA 369 (371)
Q Consensus 347 l~~r~~~~~~~~~~~~~~~~~~~ 369 (371)
+.||.|||++++.+...+.++..
T Consensus 352 lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 352 LVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHhccHHHHHHhHHHHHHHHH
Confidence 99999999999999988887764
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=1.8e-23 Score=188.21 Aligned_cols=252 Identities=23% Similarity=0.405 Sum_probs=214.7
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+....+....+.....+..|.+.+++|.+..+ .+++.+...++..+++++.|+++||+|||+.+..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 345566777788888899999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
+.+.....++++.+++.|++.|++.+...+. ..++.|++|+|+|++.+++.+....+|..++|.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 148 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------- 148 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred ccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccc
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (371)
..+|+..+.+.++..++..+...+.+ |.
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~ 176 (352)
T cd06174 149 --------SLGWRWLFLILAILGLLLALLLLFLL--------------------------------------------RL 176 (352)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------HH
Confidence 45566666776666666555544443 34
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH-HHHHHHH
Q 017429 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGV 362 (371)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~-~~~~~~~ 362 (371)
++...+..++..........+.+.+..+. +|.+..+.+.......++..++. ++.+++.||.++|+ .+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEV-----LGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLL 250 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHH
Confidence 56666677777777777778888887665 58899999999999999999998 57889999999999 8877777
Q ss_pred hhhhcc
Q 017429 363 NFEHSV 368 (371)
Q Consensus 363 ~~~~~~ 368 (371)
+..++.
T Consensus 251 ~~~i~~ 256 (352)
T cd06174 251 LAALGL 256 (352)
T ss_pred HHHHHH
Confidence 666554
No 71
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.92 E-value=2.3e-23 Score=189.88 Aligned_cols=267 Identities=14% Similarity=0.130 Sum_probs=195.7
Q ss_pred HHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCc----hHHHHHHHHHHHH
Q 017429 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIF 125 (371)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~ 125 (371)
.+....+.+...|.+|.+.+++|.+..+ +|+..+++.++..++++++|+++||+||| +.+.+...+. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 4444556677889999999999999999 99999999999999999999999999994 3333222221 2
Q ss_pred HHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcc
Q 017429 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (371)
Q Consensus 126 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~ 204 (371)
.......++++.+++.|++.|++.+...+. .++..++ +++|+++.+......++|..+||.+++++.+
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~--------- 153 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS--------- 153 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 223334578999999999999987777775 6666665 4568888888888899999999999999998
Q ss_pred cccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccch
Q 017429 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (371)
Q Consensus 205 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (371)
.++|+..++..++..++..+..++.||++++.++++ + ..+....+++++|+|.+
T Consensus 154 -------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~i~~~~~~ 207 (382)
T PRK11128 154 -------WFGEQAILWILTAGVASMLLGQLLRPTIMPQGESRQ---Q----------------ESAGWPAWKALLKEPTV 207 (382)
T ss_pred -------HcChhHHHHHHHHHHHHHHHHHHccCCCCCcccccc---c----------------cccccchHHHHHcChhH
Confidence 566777666666544444444444454322111000 0 00112356788899999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhh
Q 017429 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNF 364 (371)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~ 364 (371)
+...+..++..........+.+.|..+ .|.++.+.|.+.+...++.++.. +..+++.||+++++.+..+.+..
T Consensus 208 ~~~~~~~~l~~~~~~~~~~~~~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYGFSAIYWQA------AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHH
Confidence 888777777766666677777877743 68899999999998888777777 57889999999999988887776
Q ss_pred hhcc
Q 017429 365 EHSV 368 (371)
Q Consensus 365 ~~~~ 368 (371)
.++.
T Consensus 281 ~~~~ 284 (382)
T PRK11128 281 VVRW 284 (382)
T ss_pred HHHH
Confidence 6543
No 72
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.92 E-value=1.5e-23 Score=191.84 Aligned_cols=269 Identities=15% Similarity=0.119 Sum_probs=189.1
Q ss_pred hhcccccchhhHHHHHHhhcc--ccccccchhhhHHHHH-----HHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 017429 53 TALPISSLFPFLYFMIKDFQI--AKREEDIGSYAGYVGS-----SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (371)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 125 (371)
+.++...+....+.+.+++.. ++++ .+...+ ...++..+++++.|+++||+|||++++.+.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 78 (394)
T TIGR00883 5 EWFDFYLYGFAAVLVFHTFFPPSGDPL------VALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIG 78 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCChH------HHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 445555566666777766543 3333 333333 334445578999999999999999999999999999
Q ss_pred HHHHHhHHHHH--------HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 126 NTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 126 ~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
.+++++++++. .+++.|+++|++.+...+. ..++.|++|+++|++..+..+.+..+|..+++.++..+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~ 158 (394)
T TIGR00883 79 TLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYL 158 (394)
T ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999887764 5888999999998887775 99999999999999999999999999999999988776531
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccc
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
.+ .... ..++|+.++++.++..++..+.....||++++..++++ ++......+
T Consensus 159 ~~-------~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~ 211 (394)
T TIGR00883 159 LG-------DDAL-LEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK-------------------HKKKRGPIR 211 (394)
T ss_pred cC-------HHHh-hccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-------------------cccccCCHH
Confidence 11 0000 15577887777766665555555556665432111100 001122334
Q ss_pred ccccccc--hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 277 SLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 277 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
+.+++++ ++......++..........+.|.|..+. +|.++.+.+.......+...++. ++.+++.||+++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~ 285 (394)
T TIGR00883 212 ETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT-----LGLSANSALLVLMLSLILFFITI-PLSGALSDRIGRR 285 (394)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhchH
Confidence 4555554 55555555555555566667788887554 68889999999998889998888 5889999999999
Q ss_pred HHHHHH
Q 017429 355 MVARIA 360 (371)
Q Consensus 355 ~~~~~~ 360 (371)
+.+..+
T Consensus 286 ~~~~~~ 291 (394)
T TIGR00883 286 PVLIIF 291 (394)
T ss_pred HHHHHH
Confidence 876643
No 73
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=5.6e-23 Score=192.53 Aligned_cols=277 Identities=13% Similarity=0.165 Sum_probs=202.4
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-----CCchH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV 114 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~ 114 (371)
+++...++...+..+.......+.+|.+.++.|.+.++ ++.+ +.....+ ++.+++|+++||+ |||+.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 44566677777778888888889999999999999888 8876 3333333 6899999999999 99885
Q ss_pred -HHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhh
Q 017429 115 -IIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (371)
Q Consensus 115 -l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i 189 (371)
++.+.+..+++...+++. ++++.+.+.+++.+++.+...+. .++..|++|+++|+++.++...+..+|.++++.+
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l 162 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 667777777777776664 47888888999999987777775 9999999999999999999999999999999999
Q ss_pred hhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcc
Q 017429 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (371)
Q Consensus 190 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (371)
++.+.+. .++|+..+++.++..++..+..++.||+++..+. ++ +.. +
T Consensus 163 ~~~l~~~---------------~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~-~~--~~~---------------~ 209 (491)
T PRK11010 163 ALWLADR---------------YLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPV-PK--TLE---------------Q 209 (491)
T ss_pred HHHHHhc---------------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-cc--chh---------------h
Confidence 9998761 2467887788777776666666667876432110 00 000 0
Q ss_pred cCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHH-HHHHHHHHHHHHHHHHHH
Q 017429 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA-ITGFSLLVFQLSLYPFLE 348 (371)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 348 (371)
....+.++.++++..+...+..++..........+.+.|+.+. +|+++.+.+.+.. ...++.+++. ++++++.
T Consensus 210 ~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~-----~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~ 283 (491)
T PRK11010 210 AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRG-----VGFDAGEVGLVNKTLGLLATIVGA-LYGGILM 283 (491)
T ss_pred hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0012344566677776666555555555555555666665443 7999999999875 4446777777 6899999
Q ss_pred HHhchhHHHHHHHHh
Q 017429 349 RILGPIMVARIAGVN 363 (371)
Q Consensus 349 ~r~~~~~~~~~~~~~ 363 (371)
||+++|+.+..+.++
T Consensus 284 dr~g~~~~l~i~~~l 298 (491)
T PRK11010 284 QRLSLFRALMIFGIL 298 (491)
T ss_pred HHHhHHHHHHHHHHH
Confidence 999998876655443
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=5.2e-23 Score=185.87 Aligned_cols=271 Identities=12% Similarity=0.192 Sum_probs=193.5
Q ss_pred ccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-----CCchHH-HHHHHHHHHHHHHH
Q 017429 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPVI-IMGTASVVIFNTLF 129 (371)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~l-~~~~~~~~~~~~~~ 129 (371)
.....++..|.+.+++|+|.++ .|+.... .+...+ .+++|+++||+ ||||.+ +.+.++.++.....
T Consensus 3 ~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 3 PLGLVGNTLPYWLRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred CchhHHhHHHHHHHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 4456778899999999999999 9988655 445444 99999999998 898874 56777777776666
Q ss_pred HhH---HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCccc
Q 017429 130 GLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (371)
Q Consensus 130 ~~~---~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g 205 (371)
++. .+.+.+....++.+++.+...+. .++++|++|+|+|+++.++...+..+|.++++.+++.+... ++
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-------~g 147 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-------EF 147 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-------cc
Confidence 665 45666777777888777777775 99999999999999999999999999999999999988872 22
Q ss_pred ccccccCccchhHHHHHHHHHHHHHHHHh-hccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccc-
Q 017429 206 SESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP- 283 (371)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (371)
.... .+++|+.++++.++..++..+..+ ..||+.++... + ++.. . +.....+++++++.
T Consensus 148 ~~~~-~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~-~--~~~~--------~-------~~~~~~~~~~~~~~~ 208 (356)
T TIGR00901 148 ANTG-LITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASV-P--KPLT--------Q-------AVLKPIREFFQRKNM 208 (356)
T ss_pred cccc-cccccHHHHHHHHHHHHHHHHHHHHhccCCCccccc-c--hhHH--------H-------HHHHHHHHHHHhcCc
Confidence 1111 255689888888877766655544 35664321110 0 0000 0 00113445666665
Q ss_pred --hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHhchhHHHHHH
Q 017429 284 --LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIA 360 (371)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~l~~r~~~~~~~~~~ 360 (371)
++...+..++..........+.+.|..+ +|+++.+.+.+....+. ..+++. ++++++.||+|+|+.+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~ 281 (356)
T TIGR00901 209 IQALLLLLLIVLYKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLF 281 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHH
Confidence 5555666565666666677788888754 68899999988887774 455655 6889999999999888777
Q ss_pred HHhhhhc
Q 017429 361 GVNFEHS 367 (371)
Q Consensus 361 ~~~~~~~ 367 (371)
+++..++
T Consensus 282 ~~~~~~~ 288 (356)
T TIGR00901 282 GIVQALT 288 (356)
T ss_pred HHHHHHH
Confidence 7665543
No 75
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=6.3e-23 Score=188.29 Aligned_cols=271 Identities=14% Similarity=0.211 Sum_probs=198.6
Q ss_pred HHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-----CCch-HHHHHHH
Q 017429 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGTA 120 (371)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~ 120 (371)
....+.+++..+.....+|.+.++.|++.++ +|++..+... .+..+++|+++||+ |||| .+.++.+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~ 76 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQV 76 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHH
Confidence 3456677888888899999999999999999 9998666664 58999999999999 8765 6888888
Q ss_pred HHHHHHHHHHhH---HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 121 SVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 121 ~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
+.+++....++. .+++.+++..++.+++.+...+. .+++.|++|+++|+++.++...+..+|..+++.+++.+.+.
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 887777776665 45777777777788777777775 99999999999999999999999999999999999988761
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccc
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
.++|+.++++.++..++..+..++.||++++.++++ +.. ++....++
T Consensus 157 ---------------~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~---~~~---------------~~~~~~~~ 203 (402)
T PRK11902 157 ---------------VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPR---SLG---------------EAVVGPLR 203 (402)
T ss_pred ---------------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc---hhH---------------HHHHHHHH
Confidence 136777778777766665555667777653321110 000 00112456
Q ss_pred ccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHhchhH
Q 017429 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIM 355 (371)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~l~~r~~~~~ 355 (371)
+++++|.++..++..++..........+.+.+..+. +|+++.+.+.+....+. +.+++. ++.+++.||+++|+
T Consensus 204 ~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~-----~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~ 277 (402)
T PRK11902 204 DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRG-----AGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYR 277 (402)
T ss_pred HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHH
Confidence 678899888777666665544333333444444333 78999999998876654 466666 58899999999988
Q ss_pred HHHHHHHhh
Q 017429 356 VARIAGVNF 364 (371)
Q Consensus 356 ~~~~~~~~~ 364 (371)
.+..+.++.
T Consensus 278 ~l~~~~~~~ 286 (402)
T PRK11902 278 SLMLFGVLQ 286 (402)
T ss_pred HHHHHHHHH
Confidence 776655443
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=1.3e-21 Score=179.04 Aligned_cols=266 Identities=15% Similarity=0.206 Sum_probs=178.4
Q ss_pred HHHHHHHHHhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHH-HHHHHhHHHHhhhhhcCCchHH-HHHHH
Q 017429 44 FSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMGTA 120 (371)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~ 120 (371)
...++..++..+......|.+|. +.+++|.+.++ .|++.+...+ +..++.+++|+ +||+||||.+ ..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~ 90 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCL 90 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHH
Confidence 34555577777777778888875 56889999999 9999876655 55555555555 9999999875 45566
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchh--hhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQA--LGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~--~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
...++..+.+++++++.+++.+.+.|...+...+. ..+..|..++++|. ...++.+.+.++|.++||.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~-- 168 (393)
T PRK15011 91 LGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM-- 168 (393)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH--
Confidence 66677777788889988776665555444455564 77888877766553 34477888899999999999999988
Q ss_pred CCCCCcccccccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccc
Q 017429 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (371)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
.++|+..++..++..++.. +..+++||.+++++.+++ + . ...
T Consensus 169 --------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------~----~~~- 211 (393)
T PRK15011 169 --------------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG--T----------------L----EAP- 211 (393)
T ss_pred --------------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc--c----------------c----ccc-
Confidence 5667777777776655543 345567876532211100 0 0 000
Q ss_pred ccccc-cchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH
Q 017429 277 SLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (371)
Q Consensus 277 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 355 (371)
.++ +..+...............+..+.|.|..+. +|+++.+.+.+.+...++.+++. ++.+++.||+++|+
T Consensus 212 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~ 283 (393)
T PRK15011 212 --RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINE-----LHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRF 283 (393)
T ss_pred --ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHH
Confidence 111 2223333333333334444556777777655 78899999988877777777767 58899999999998
Q ss_pred HHHHHHHh
Q 017429 356 VARIAGVN 363 (371)
Q Consensus 356 ~~~~~~~~ 363 (371)
.+..+...
T Consensus 284 ~~~~~~~~ 291 (393)
T PRK15011 284 LMRVAAVA 291 (393)
T ss_pred HHHHHHHH
Confidence 87765544
No 77
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.9e-24 Score=183.52 Aligned_cols=240 Identities=18% Similarity=0.193 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~ 162 (371)
+|++.+...+.+.+.+++.|.+.||+|+|..+++|.+++....+++++.++++.++++|.++|+|.++..++ .++++|.
T Consensus 108 iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~ 187 (464)
T KOG3764|consen 108 IGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADV 187 (464)
T ss_pred hhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999998887 9999999
Q ss_pred ccccc-hhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcccccc
Q 017429 163 FREEH-QALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (371)
Q Consensus 163 ~~~~~-r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (371)
+|+++ |++++|+...+.++|..+||.+||++.+ ..|++.||++.+++.++-..+.+++-|..+
T Consensus 188 f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------------~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 188 FPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------------FAGKSAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred cccchhhhHHHHHHHHHHhccceecCCcccchHh----------------hcCCcCcHHHHHHHHHHHHHHHHheeCccc
Confidence 99765 7999999999999999999999999999 677889999998888876666555544322
Q ss_pred CCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCcccc
Q 017429 242 RHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (371)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 321 (371)
...++. .+..+.++++++|.++..............-....++.|..+. +.-+
T Consensus 252 ~~~~~~----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~-----m~~p 304 (464)
T KOG3764|consen 252 MDPDST----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET-----MFTP 304 (464)
T ss_pred cCcccc----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh-----ccCC
Confidence 211111 1124577889999988776665555555444555566666555 5534
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--hhHHHHHHHHhhhhc
Q 017429 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVNFEHS 367 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~--~~~~~~~~~~~~~~~ 367 (371)
.-+.|..+....+...++. .+.+.+.||++ |......|++...++
T Consensus 305 ~w~~G~~fLp~~~~y~ig~-~lfg~la~k~~~~~wl~~~~gl~~~G~~ 351 (464)
T KOG3764|consen 305 GWEVGLAFLPASLSYAIGT-NLFGKLADKYPHLRWLLSLGGLATVGVS 351 (464)
T ss_pred CcceeeeecccccchhccC-chHHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 4489999999999999988 58899999999 544444555544433
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=7.5e-22 Score=180.87 Aligned_cols=284 Identities=14% Similarity=0.140 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
.++......++.........|.+|.+ .+++|.+..+ .+++.+++.++..+++++.|+++||+|||+.++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 45556666777777778888888865 4568999999 9999999999999999999999999999999988776
Q ss_pred HHHHHHHHHH---hH-----HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 121 SVVIFNTLFG---LS-----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 121 ~~~~~~~~~~---~~-----~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
..++...... +. +....+++.+++.|++.+...+. ..+..|..+ +++..++......++|..+||.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHh
Confidence 6655443221 11 12334566788888877766664 666666433 3445667777888999999999999
Q ss_pred hhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc-cccccCCCCCCccchhhhhhhhhhhhhhhhhccc
Q 017429 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (371)
Q Consensus 192 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
.+.+ ++|+.++++.+++.++..+..+.. ||+++++. +++ .. + .+++.+
T Consensus 155 ~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~----~------~~~~~~ 203 (396)
T TIGR00882 155 ILFS-----------------IDPQIVFWLGSGFALILMLLLMFAKPKAPSSAT-VAN---AL----G------ANASAF 203 (396)
T ss_pred hhhc-----------------cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhh-hhc---cc----c------cccCCC
Confidence 8764 356677777776666655444443 33322110 000 00 0 000111
Q ss_pred CCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 350 (371)
..++.++++|+|+++...+..+...........+.+.|...... +.+.+....|...+...+...++. ...+++.||
T Consensus 204 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r 280 (396)
T TIGR00882 204 SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA--TPQQGTRVFGYVTTMGELLNALIM-FCAPLIINR 280 (396)
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 12345678889988776665555444444455566777655421 124556678888888888888877 477899999
Q ss_pred hchhHHHHHHHHhhhhc
Q 017429 351 LGPIMVARIAGVNFEHS 367 (371)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ 367 (371)
.++|+.+..+.++..++
T Consensus 281 ~g~~~~l~~~~~l~~l~ 297 (396)
T TIGR00882 281 IGAKNALLIAGTIMSVR 297 (396)
T ss_pred hccchhHHHHHHHHHHH
Confidence 99999988877765553
No 79
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.1e-21 Score=169.76 Aligned_cols=291 Identities=16% Similarity=0.159 Sum_probs=228.9
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
.+..+..+....++.++......+.+|.+.+.++++..+ .+++..+++.++.+.+++.|++.+|+|+|+-++.|
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lg 84 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLG 84 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHH
Confidence 334555666777788888888899999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH---hHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 119 TASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 119 ~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
..++++++.++. ...++..++++-++.|.|.+...+. +.+++.+.+++...+.+++.+..+.+|..++|++++.+.
T Consensus 85 L~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 85 LLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 999999998874 5678899999999999999998886 999999999988899999999999999999999999998
Q ss_pred CcC----CCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc--cccccCCCCCCccchhhhhhhhhhhhhhhhhc
Q 017429 195 QPA----EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (371)
Q Consensus 195 ~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (371)
... -+......|+... --.++.++...+...++..+..... |+.+....++.
T Consensus 165 ls~~~~~~~~~~~~~~~~~~-~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~--------------------- 222 (422)
T COG0738 165 LSGVALTMSAAQILAIKGAD-ASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLG--------------------- 222 (422)
T ss_pred HhhhhhccCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccc---------------------
Confidence 620 0000011111111 1235666666655554444433332 22221111110
Q ss_pred ccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017429 269 GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (371)
++......+++++|+++...+..+++...+.....+++.|+.+. .|.+..+++...+.+..+.++++ +++.++.
T Consensus 223 ~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGR-Fig~~lm 296 (422)
T COG0738 223 ASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGR-FIGSALM 296 (422)
T ss_pred ccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 01111567889999999999999999999999999999999887 78899999999999999999999 5778888
Q ss_pred HHhchhHHHHHHHHh
Q 017429 349 RILGPIMVARIAGVN 363 (371)
Q Consensus 349 ~r~~~~~~~~~~~~~ 363 (371)
+|+...|.+.+..+.
T Consensus 297 ~~~~~~k~Laf~a~~ 311 (422)
T COG0738 297 SRIKPEKYLAFYALI 311 (422)
T ss_pred HHhCHHHHHHHHHHH
Confidence 899999888766543
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=2e-22 Score=208.48 Aligned_cols=299 Identities=17% Similarity=0.122 Sum_probs=202.6
Q ss_pred hHHHHHHHHHHHhhcccc-cchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 41 TELFSIWIIVLCTALPIS-SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+.+...++..++..+... ......+.+..+++.+... ...+++.+++.++..++++++|+++||+|||++++++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQV----ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 344444444544444332 3334445566666554332 22688899999999999999999999999999999988
Q ss_pred HHHHHHHHHHH---hHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 120 ~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
++.+++.++.. ..++++.+++.|++.|++.+...+. .++++|++|+++|++++++.+.+..+|.++||.+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665554443 3568999999999999999988886 9999999999999999999999999999999999999986
Q ss_pred cCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccc
Q 017429 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (371)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
.... .+..+ + .+.++..++......++.++..+.+||.+.....+.+..... . .......+
T Consensus 165 ~~~~-~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~ 225 (1146)
T PRK08633 165 SVNG-NTPSE----I-LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYL--F-----------PKLLWRNL 225 (1146)
T ss_pred hhcc-ccccc----c-ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccc--c-----------HHHHHHHH
Confidence 2000 00000 0 111222223333333344455566777654432211000000 0 00011234
Q ss_pred cccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccch-hhhHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 017429 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~ 354 (371)
+.+++++.++..++..++..........++|.|.... +|++.. ..+++.+..+++.++++ ++.+++.||.+++
T Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~r~~~~ 299 (1146)
T PRK08633 226 KLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEV-----LGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSGRHIEL 299 (1146)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-----hCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhCCceEc
Confidence 5677888888777776666666666677778777665 788888 89999999999999988 5889999999988
Q ss_pred HHHHHHHHhhhhcc
Q 017429 355 MVARIAGVNFEHSV 368 (371)
Q Consensus 355 ~~~~~~~~~~~~~~ 368 (371)
+.+.++.+++++++
T Consensus 300 ~~~~~~~~~~~~~~ 313 (1146)
T PRK08633 300 GLVPLGALGLALSL 313 (1146)
T ss_pred cchhHHHHHHHHHH
Confidence 77766666554443
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.89 E-value=1.6e-21 Score=181.67 Aligned_cols=286 Identities=22% Similarity=0.260 Sum_probs=218.4
Q ss_pred CChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
.+.+.+..+|...++..++..+.....+-+..+..-|... .+++..+..+..++.++++|.++||++||++++.
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~------valv~~a~~LP~~Llsl~aG~laDr~drrrili~ 80 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLM------VALVQAASTLPILLLSLFAGALADRFDRRRILIL 80 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence 3445666788888888888888888888777777777777 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-----HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 118 GTASVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 118 ~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
+.++.++..+..++ ..+++.+++.-++.|++.+...|+ ++++.|+.|+++...+.++.+...+++..+||.++|
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 98877665544433 247788999999999999999998 999999999999999999999999999999999999
Q ss_pred hhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccC
Q 017429 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (371)
Q Consensus 192 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (371)
.+.. .++....+.+.++..++.+......+.........+ +.. ..+.
T Consensus 161 ~Lva----------------~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~---e~~--------------~~~l 207 (524)
T PF05977_consen 161 ILVA----------------FFGAAAAFLINALSFLISILALLRWKPPPPPSSLPR---ERF--------------FSAL 207 (524)
T ss_pred HHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHccccccccccch---hhh--------------hhhH
Confidence 9987 444555566666665555555454443221111110 000 0111
Q ss_pred CccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017429 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (371)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~ 351 (371)
...++.+.++|.+...++..+++......+...+|.+..+. +|.++...|++.+..+++.+++++ +.+++.+|.
T Consensus 208 ~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-----l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~~ 281 (524)
T PF05977_consen 208 REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV-----LGGGASGYGLLLAAFGVGAILGAL-LLPRLRRRL 281 (524)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH-----hCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhccc
Confidence 22445566677776666666666666666677788887666 788999999999999999999995 778899999
Q ss_pred chhHHHHHHHHhhhhcc
Q 017429 352 GPIMVARIAGVNFEHSV 368 (371)
Q Consensus 352 ~~~~~~~~~~~~~~~~~ 368 (371)
++++++..+.+++++++
T Consensus 282 ~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 282 SSRRLVLLASLLFALAL 298 (524)
T ss_pred CcchhhHHHHHHHHHHH
Confidence 98888877777666554
No 82
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.89 E-value=1e-21 Score=202.66 Aligned_cols=239 Identities=16% Similarity=0.144 Sum_probs=180.2
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH---HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~ 159 (371)
.++..+++.++++++++++|+++||+|||+++.. ..+...+..+.....++++.++++|+++|++.+...|+ .+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 7888889999999999999999999999997643 22222222233334589999999999999999988886 9999
Q ss_pred hhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcccc
Q 017429 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (371)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (371)
.|++|+++|++++++.+++.++|.++||.++|++.. ..+|+..++...+..++.++..+++|++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI----------------SGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh----------------ccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999987 5556666655555555555666677766
Q ss_pred ccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCcc
Q 017429 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (371)
+............. + .....++.+.+++.++...+..++..+.......++|.|..+. +|
T Consensus 198 ~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g 257 (1140)
T PRK06814 198 GNAAPDLKIDRNII-R--------------STITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET-----LG 257 (1140)
T ss_pred CCCCCCCeeccchH-H--------------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----cC
Confidence 43222111100000 0 0012456677889999888888877777777778889988776 78
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Q 017429 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (371)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~ 359 (371)
.++.+.|.+++..+++.++++. +.+++.++..+++.+..
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~-~~g~l~~~~~~~~~~~~ 296 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSF-LASKLSEGRITLLYVPI 296 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHH-HHHHHhCCceeeeeehH
Confidence 9999999999999999999995 77888876665554433
No 83
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.88 E-value=3.6e-21 Score=177.78 Aligned_cols=286 Identities=13% Similarity=0.093 Sum_probs=176.9
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+.++...+..++.....+...+++|.+. +++|++..+ .|++.+++.++..+++++.|+++||+|||++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~ 83 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWII 83 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 3455555666666666677788888555 459999999 999999999999999999999999999999998876
Q ss_pred HHHHHHHHHHH---hHHH-----HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 120 ASVVIFNTLFG---LSVN-----FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 120 ~~~~~~~~~~~---~~~~-----~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
.+.+++..... ..+. ....++.++..|.+.....+. ..+..+ . .+++++.++......++|..++|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHH
Confidence 66554433211 1111 111122233333322222222 233222 2 34567788888888899999999999
Q ss_pred hhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhccc
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
+.+.+ .+|+.+++..++..++..+..++.+++++++....++++. +++..
T Consensus 162 g~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 211 (420)
T PRK09528 162 GILFN-----------------INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-------------NASAV 211 (420)
T ss_pred HHHHh-----------------cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhc-------------ccccc
Confidence 98875 2455666776666655555554444332221110000000 00001
Q ss_pred CCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 350 (371)
..+..++.+|+|.++...+..+.............|.|..+.. .+.+.+..+.|.+.+...+...++. +..+++.||
T Consensus 212 ~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr 288 (420)
T PRK09528 212 SLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF--ATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINR 288 (420)
T ss_pred cHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 1123345677887766555444444433444445666654331 1135667788999998888888887 588999999
Q ss_pred hchhHHHHHHHHhhhhc
Q 017429 351 LGPIMVARIAGVNFEHS 367 (371)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ 367 (371)
+++|+.+..+.++..++
T Consensus 289 ~g~~~~~~~~~~l~~~~ 305 (420)
T PRK09528 289 IGAKNALLLAGTIMAVR 305 (420)
T ss_pred hCcchhhHHHHHHHHHH
Confidence 99999887777665543
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=1.1e-20 Score=176.47 Aligned_cols=176 Identities=17% Similarity=0.148 Sum_probs=142.2
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh-cCCchHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIM 117 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~ 117 (371)
.+.++.++...+...+.++...+.++ ++.+++|.+.++ .+++.+.+.....+..+++|+++|| +||||++++
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 35666677777778888777777665 556789999988 8999999998888888999999999 999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHH-HHHHHHHHhhhccchhHH-HHHHhhhcccc--chhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 118 GTASVVIFNTLFGLSVNFWM-AVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~-~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
+.+++.++.++++++.+... ++++|+++|++.|...+. .+++.|.+|++ +|++++++++.+.++|..+||.+++++
T Consensus 87 g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998766444 558899999999988775 99999999877 457789999999999999999999999
Q ss_pred cCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcc
Q 017429 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (371)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (371)
.+ .++|++.|++..+..++.++.+...+
T Consensus 167 ~~----------------~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 167 AD----------------KFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HH----------------hhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 98 44566666665443333344444444
No 85
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.88 E-value=3.9e-20 Score=171.97 Aligned_cols=285 Identities=13% Similarity=0.140 Sum_probs=188.1
Q ss_pred hhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH
Q 017429 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (371)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (371)
..+........++.+.+|+|-++. ..|+.++..++..++.++.|+++|.+|||++++.+.++..++.++++.+
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~~~~-------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA 128 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGGSDN-------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA 128 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCCCcc-------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC
Confidence 344455556777889999987654 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccC
Q 017429 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (371)
Q Consensus 133 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~ 212 (371)
+|...++++..+.|++.|........++|..|.|.|+...++......+....+|.++..+.. .
T Consensus 129 ~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~----------------~ 192 (599)
T PF06609_consen 129 QNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA----------------H 192 (599)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc----------------C
Confidence 999999999999999988777777779999999999888777766655555667777766655 2
Q ss_pred ccchhHHHHHHHHHHHHHHH--HhhccccccCCCCCCccchhhhhhhhh-------------------------hhhhh-
Q 017429 213 FPYFLPCLCISLFAFGVTIA--AFWLPETLHRHNDDDDSCDVSYDALES-------------------------ASAEV- 264 (371)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~- 264 (371)
.+||+.+++.++...+.++. .+..|.+.+..+.++....+...++|- .....
T Consensus 193 ~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~ 272 (599)
T PF06609_consen 193 SGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAH 272 (599)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 33444445555544443332 233333222111111111111112211 00000
Q ss_pred -----------------hhhc--ccCCccccccccccc-hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccc--
Q 017429 265 -----------------KEEE--GREATPKKSLLKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST-- 322 (371)
Q Consensus 265 -----------------~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-- 322 (371)
.|.. .+.+..+.+++++++ +...++..++.....++...++|...... ++-++
T Consensus 273 VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v-----f~~d~~~ 347 (599)
T PF06609_consen 273 VIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNV-----FGSDPIS 347 (599)
T ss_pred chhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccCCCcc
Confidence 0211 234556677888754 44445666666666677777777766555 33333
Q ss_pred -hhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH-HHHHHHHhhhh
Q 017429 323 -QMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGVNFEH 366 (371)
Q Consensus 323 -~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~-~~~~~~~~~~~ 366 (371)
...+......+++..++.. +.+.+.++.++.| .++++.+++.+
T Consensus 348 ~~~~~~~s~~~~fg~~~g~~-i~g~l~~~ir~~Kw~li~~~~~~ta 392 (599)
T PF06609_consen 348 ITEIGWISSPVGFGSCAGAV-ILGLLFSKIRHIKWQLIFGSVLMTA 392 (599)
T ss_pred cceeehhhhhHHHHHHHHHH-HHHHHHHHccchhHHHHHHHHHHHH
Confidence 3567777777777777774 5566666665544 44456555443
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.87 E-value=3.3e-20 Score=173.05 Aligned_cols=175 Identities=14% Similarity=0.188 Sum_probs=147.4
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHH-h--hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh-cCCchHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-D--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~ 116 (371)
+.++.++...++..++.+...+.+|.+.+ + +|.+..+ .+++.+.+.++..++++++|+++|| +|||++++
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 44566677778888888888888887754 4 8999988 9999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccc---hhhhhHhhhhhhhhHHhHHHhhhhh
Q 017429 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGF 192 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~i~~~ 192 (371)
++.++.+++.++.+++++++.+++.|++.|++.|...+. .++++|++|+++ |++++++++.+.++|..+||.+++.
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888888999999999999887775 899999998754 8889999999999999999999999
Q ss_pred hcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcc
Q 017429 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (371)
Q Consensus 193 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (371)
+.+ .++|+..+...++..++.++..+..+
T Consensus 164 l~~----------------~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 164 IAE----------------NYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHH----------------hcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 987 55667666766655444444444444
No 87
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.87 E-value=3.8e-20 Score=170.25 Aligned_cols=276 Identities=12% Similarity=0.043 Sum_probs=184.6
Q ss_pred HHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC-chHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASV 122 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~ 122 (371)
.+....++.....+...|.++ .+.+++|++..+ +|++.+++.++..++++++|+++||+|| |+++.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 345556666666677766665 566779999999 9999999999999999999999999965 77888888888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHH----h----hhccccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA----C----EIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~----~----~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
.+......+.++++.+++.|++.|++.+...+. .++. . |......|.+..| .+|.++||.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l 153 (418)
T TIGR00889 80 ALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL 153 (418)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh
Confidence 888888888889999999999999876655543 3332 2 2223233444444 46888888888877
Q ss_pred cCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCc
Q 017429 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (371)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (371)
.. ...| .++++.++..++..+..+++||+++.+++++. +.. +..+.
T Consensus 154 ~~----------------~~~~-~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~~---------------~~~~~ 199 (418)
T TIGR00889 154 DI----------------ELSN-IQLYITAGSSALLGVFALTLPDIPVAKSTAKM--SIK---------------VMLGL 199 (418)
T ss_pred cc----------------cchh-HHHHHHHHHHHHHHHHHhcCCCCCCCcccccc--CHH---------------HHhhh
Confidence 43 2222 23455555555555556677876532211100 000 00011
Q ss_pred cccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccC--CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017429 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG--GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (371)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~ 351 (371)
..++.+|+|.++...+..++..........+.+.|..+..... .-+++....+...+...+..+++. +..+++.||+
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~ 278 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRF 278 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 2345678888777766666655544445555666654420000 012345677999999999999988 5788999999
Q ss_pred chhHHHHHHHHhhhhc
Q 017429 352 GPIMVARIAGVNFEHS 367 (371)
Q Consensus 352 ~~~~~~~~~~~~~~~~ 367 (371)
|+|+++..+.++..++
T Consensus 279 g~r~~l~~~~~~~~v~ 294 (418)
T TIGR00889 279 GIKKVMLLSLVAWALR 294 (418)
T ss_pred CcHHHHHHHHHHHHHH
Confidence 9999998888776665
No 88
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=7.8e-20 Score=169.61 Aligned_cols=291 Identities=18% Similarity=0.171 Sum_probs=210.2
Q ss_pred CCChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH
Q 017429 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (371)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~ 116 (371)
...|-..+..++..+........+..+.+.+.++++.+.++ ++|+.++......+.+|+.+.+.||+|.|.+.+
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i 115 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMI 115 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHH
Confidence 33444444444444444444455567788999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHH-HHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 117 MGTASVVIFNTLFGLSVNFWMAVLTR-FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~r-~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
+|.++..++.++..++++.|++++.. ++.|+|.|+... ....+..+| +++|+.+.|+...+.++|.++-|.+...+.
T Consensus 116 ~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 116 AGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 99999999999999999999888776 778999888655 566776555 567999999999999999999999999999
Q ss_pred CcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccc-cccCCCC----------------------CCccch
Q 017429 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE-TLHRHND----------------------DDDSCD 251 (371)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~----------------------~~~~~~ 251 (371)
+ .++||...++.+.+.+-.++....+++ +++.... ...+..
T Consensus 195 ~----------------~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (509)
T KOG2504|consen 195 S----------------KYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDS 258 (509)
T ss_pred H----------------HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCC
Confidence 8 677777777777666555544443333 2221110 000000
Q ss_pred hhhh----hhhhhhhhhhhhc-ccCCcc----ccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccc
Q 017429 252 VSYD----ALESASAEVKEEE-GREATP----KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (371)
Q Consensus 252 ~~~~----~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 322 (371)
...+ ..+...+..++.. ...+.. ..++++++.++...+...+..........+++.|..+ .+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~------~g~~~ 332 (509)
T KOG2504|consen 259 GLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS------LGLSS 332 (509)
T ss_pred CCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCCh
Confidence 0000 0000000000001 011111 2578899999988888888888877777788888774 79999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH
Q 017429 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~ 357 (371)
.+++.++++.++..++++ ++.+++.|+...++..
T Consensus 333 ~~aa~l~Siigi~~i~gR-i~~G~laD~~~~~~~~ 366 (509)
T KOG2504|consen 333 NDAAFLLSIIGVSDIIGR-IILGLLADKPGIRALV 366 (509)
T ss_pred hhhHHHHHHHHHhhhhhh-hhhhhhcCccccchHH
Confidence 999999999999999999 5889999998844433
No 89
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.86 E-value=1.7e-19 Score=165.03 Aligned_cols=273 Identities=12% Similarity=0.046 Sum_probs=191.7
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHH--HHHHHHHHHHHhHHHHh-hhhhcCCchHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFWGL-VADRYGRKPVIIMGT 119 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~-l~dr~Grr~~l~~~~ 119 (371)
+..+....+.+++..+...|.+|.+.++.|.+.++ +|+. .+...+...+.+|+.+. ..||+||||..++.+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 44566778889999999999999999999999999 9997 46668888888888855 799999998876655
Q ss_pred HHH-HHHHHHHH---hHHH-HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 120 ASV-VIFNTLFG---LSVN-FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 120 ~~~-~~~~~~~~---~~~~-~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
.+. .......+ ...+ ..+++...++..+..+...+. ..+..|..++++++...+....+..+|..+|+...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22222222 1222 333344444444555555554 67778888888888888888888888999999888888
Q ss_pred cCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCc
Q 017429 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (371)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (371)
.+ .++|+.++++.++..++..+..++++|+++++.+++ + ....
T Consensus 157 ~~----------------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~---~------------------~~~~ 199 (390)
T TIGR02718 157 FG----------------KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAP---L------------------ARRA 199 (390)
T ss_pred HH----------------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccc---h------------------hhHH
Confidence 87 667788888888777665555555554332111000 0 0012
Q ss_pred cccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhch
Q 017429 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (371)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~ 353 (371)
..++.+|+|.++......++..........+.+.|..+ .|+++.+.|.+....++...+.+.++.+++.||+|+
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~ 273 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGL 273 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 34567888888877777777777667777777777755 699999999998888765554433688999999999
Q ss_pred hHHHHHHHHhh
Q 017429 354 IMVARIAGVNF 364 (371)
Q Consensus 354 ~~~~~~~~~~~ 364 (371)
++.+..+.++.
T Consensus 274 ~~~l~~~~~~~ 284 (390)
T TIGR02718 274 WRTFILGVGLA 284 (390)
T ss_pred HHHHHHHHHHH
Confidence 99887766543
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.86 E-value=1.9e-19 Score=161.27 Aligned_cols=177 Identities=12% Similarity=0.104 Sum_probs=144.4
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+|+..|+.-+ ........|++.+++|+++++. .|.+.++++.++.++.++.|+++||+|.|+++.++.+.+.+
T Consensus 31 ~lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 31 YLCFYGFMAQF-RPGESFITPYLLTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVC 104 (511)
T ss_pred HHHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 34444443333 3445566788999999998762 68999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~ 204 (371)
..++.++++++..+.+.|++.|++.|...+...++..++|+++|+++.++..++..+|.++++++++.+. .+
T Consensus 105 ~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~--------s~ 176 (511)
T TIGR00806 105 VWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV--------TL 176 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hc
Confidence 9999999999999999999999999887755999999999999999999999999999999999999943 34
Q ss_pred cccccccCccchhHHHHHHHHHHHHHHHHhhcccccc
Q 017429 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (371)
Q Consensus 205 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (371)
||++.. ...++......++++..+++|..++
T Consensus 177 gWr~y~------~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 177 GWISYS------TLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred CchhHH------HHHHHHHHHHHHHHHHHHhCCCCch
Confidence 565533 2233444444556667788885443
No 91
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.85 E-value=1.3e-24 Score=202.57 Aligned_cols=301 Identities=19% Similarity=0.282 Sum_probs=193.4
Q ss_pred HHHhhcccccchhhHHHHH--Hhhcccccccc---chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 50 VLCTALPISSLFPFLYFMI--KDFQIAKREED---IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+..+.+........+... ..+..+..... .....++..+...+|..+|++++|.++||+|||+.++++.++..+
T Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i 88 (451)
T PF00083_consen 9 GFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMII 88 (451)
T ss_pred HHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccccc
Confidence 3555555554444443332 22333322211 234478899999999999999999999999999999999999999
Q ss_pred HHHHHHhHH---HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 125 FNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 125 ~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
+.++.++++ +++.+.++|++.|++.|...+. ..++.|..|+++|++..++.+.+..+|..++..++..+.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~--- 165 (451)
T PF00083_consen 89 GSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS--- 165 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence 999999999 9999999999999998887775 999999999999999999999999999998888876553311
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhh--hhhh---hhhhhhhhhc------c
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALE---SASAEVKEEE------G 269 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~------~ 269 (371)
+ .+.||..+...++..++.++..+++||+|++...+++.+++.+ ++.+ ..+++.+++. .
T Consensus 166 ----~------~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 235 (451)
T PF00083_consen 166 ----D------NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQ 235 (451)
T ss_pred ----c------cccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccccc
Confidence 0 2446666677777777777777899999998765544333221 1110 0000111100 1
Q ss_pred cCCccccccccccc-hHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccch-hhhHHHHHHHHHHHHHHHHHHHHH
Q 017429 270 REATPKKSLLKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFL 347 (371)
Q Consensus 270 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~l 347 (371)
+.+..++++++++. .+.......+..............|. +......+.+.. .... ..++...++. +++..+
T Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~--~~i~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~ 309 (451)
T PF00083_consen 236 ESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS--PSIFENAGISNSFLATL---ILGLVNFLGT-LLAIFL 309 (451)
T ss_pred ccceeeeeccccccccccccccccccccccccccccccccc--ccccccccccccccccc---cccccccccc-cccccc
Confidence 11134667777654 22222222222222222212222222 222223455555 2222 2333444444 355689
Q ss_pred HHHhchhHHHHHHHHhhhhccc
Q 017429 348 ERILGPIMVARIAGVNFEHSVA 369 (371)
Q Consensus 348 ~~r~~~~~~~~~~~~~~~~~~~ 369 (371)
.||+|||+++..+.....++.+
T Consensus 310 ~~~~GRr~~~i~~~~~~~~~~~ 331 (451)
T PF00083_consen 310 IDRFGRRKLLIIGLLLMAICSL 331 (451)
T ss_pred cccccccccccccccccccccc
Confidence 9999999999888877666554
No 92
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.84 E-value=2.1e-19 Score=170.47 Aligned_cols=267 Identities=16% Similarity=0.151 Sum_probs=178.0
Q ss_pred HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Q 017429 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (371)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 147 (371)
.+.++.+... ..+..+++++|..+|++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|+
T Consensus 110 ~~~~c~~~~~------~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 110 WNLVCDSSTL------VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred hceeeCcHhH------HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 3455556666 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHH
Q 017429 148 LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 226 (371)
Q Consensus 148 ~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 226 (371)
+.+.... ...+++|++++++|+.+..+ ......++.++|..++++.. +||+.+++..+..
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------------------~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------------------DWRWLFWIISIPS 244 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHHH
Confidence 8666655 59999999999999999999 66777777778888887764 4666667777777
Q ss_pred HHHHHHHhhccccccCCCCCCccchhhh--hhhhh-------h---h-hh-h-hhh---cccCCccccccccccchHHHH
Q 017429 227 FGVTIAAFWLPETLHRHNDDDDSCDVSY--DALES-------A---S-AE-V-KEE---EGREATPKKSLLKNWPLMSSI 288 (371)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~-------~---~-~~-~-~~~---~~~~~~~~~~~~~~~~~~~~~ 288 (371)
++.++..+..||++++...+.+.+++.+ ++..+ . . .. . ++. ....+....++++.|++....
T Consensus 245 ~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 324 (521)
T KOG0255|consen 245 GLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRT 324 (521)
T ss_pred HHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHH
Confidence 7766667777799998665544332221 11100 0 0 00 0 000 011223466777777544333
Q ss_pred HHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
+...+..+..... |....+...++|.+... .....+....... ...+...++.|||.....+..+..+++
T Consensus 325 ~~~~~~~~~~~~~------y~gl~~~~~~lg~~~~~---~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~ 394 (521)
T KOG0255|consen 325 LYLLFIWFVFSLV------YYGLSLNVSGLGGNIYL---NFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGL 394 (521)
T ss_pred HHHHHHHHHHhHH------HHhhhhhhhhcCchHHH---HHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3322222111111 11111111113333322 2233333444444 466788899999999888877766665
Q ss_pred c
Q 017429 369 A 369 (371)
Q Consensus 369 ~ 369 (371)
+
T Consensus 395 ~ 395 (521)
T KOG0255|consen 395 L 395 (521)
T ss_pred H
Confidence 4
No 93
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.84 E-value=4.3e-20 Score=171.58 Aligned_cols=271 Identities=16% Similarity=0.130 Sum_probs=183.9
Q ss_pred ccchhhH-HHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh----cCCc-hHHHHHHHHHHHHHHHHHh
Q 017429 58 SSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRK-PVIIMGTASVVIFNTLFGL 131 (371)
Q Consensus 58 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~ 131 (371)
....+++ +.+.+++|++..+ .|++.++..+..++..|+.|+++|| +||| +.++.+.+..+++.+++..
T Consensus 16 ~~~~~~l~~~~~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~ 89 (437)
T TIGR00792 16 AIVSTYLLFFYTDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT 89 (437)
T ss_pred HHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh
Confidence 3444444 4667789999999 9999999999999999999999997 6774 4567788888877777765
Q ss_pred HHH------HHHHHHHHHHHhhhccchhH-HHHHHhhhc-cccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 132 SVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 132 ~~~------~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
.++ ...+++.+++.+++.+...+ ..++..|.. ++++|++..++.+.+..+|..+++.+.+.+....++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~-- 167 (437)
T TIGR00792 90 TPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGD-- 167 (437)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--
Confidence 432 45667778888887776555 478888887 57889999999888888888887777666553211100
Q ss_pred ccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccccc
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
...+|+..+.+.+++.++..+ ..+..||++++...++++ +.+..+..++++++|
T Consensus 168 -------~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~------------------~~~~~~~~~~l~~~~ 222 (437)
T TIGR00792 168 -------DKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEK------------------KLSLKQIFKALFKND 222 (437)
T ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccccc------------------CCCHHHHHHHHhCCH
Confidence 045677777777766655443 455667654211110000 001112355678899
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Q 017429 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (371)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 362 (371)
+++...+..++..........+.+.|.... ++ ++...+.+.....++.+++. ++.+++.||+|+|+.+..+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~~~~~ 295 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYV-----LG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFAGGIL 295 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeee-----cC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHH
Confidence 888877776666655555444444444332 34 45566777777778888877 578999999999999888877
Q ss_pred hhhhcc
Q 017429 363 NFEHSV 368 (371)
Q Consensus 363 ~~~~~~ 368 (371)
+.+++.
T Consensus 296 ~~~~~~ 301 (437)
T TIGR00792 296 LMVLGY 301 (437)
T ss_pred HHHHHH
Confidence 665543
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=3.8e-19 Score=151.41 Aligned_cols=305 Identities=16% Similarity=0.108 Sum_probs=203.6
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+..........+...+......-+.|......|.+..+ ..++....+.+..+++..+|..+|++|||+.+....
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 33344444455555554445555667777888988888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
+..++..++.+.++|+.++++.|.+.|+|.|......++-.|..|..+|...+-+. ..+.+|.++...++-.+..
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~---- 225 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS---- 225 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999999888444588889999999999877666 8999999999999988877
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhh--hhhhhh---------------hh
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESA---------------SA 262 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~---------------~~ 262 (371)
+.+||+......+...+....++++||+|+....+.++.++.+ +++..+ .+
T Consensus 226 ------------~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~ 293 (528)
T KOG0253|consen 226 ------------NFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDR 293 (528)
T ss_pred ------------hhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhh
Confidence 4444544466677777778889999999998766554443322 111100 00
Q ss_pred hhhhh------c----ccCCccccccccccchHHHHHHHHHHHhhhhhHHHHH---HHHhcCCCccCC----------c-
Q 017429 263 EVKEE------E----GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF---SLWANSPKKLGG----------L- 318 (371)
Q Consensus 263 ~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~- 318 (371)
+++|+ + .........++...-.+..+...+.+....+.+.... .-+.+....-.. .
T Consensus 294 ~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~ 373 (528)
T KOG0253|consen 294 QEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETR 373 (528)
T ss_pred hhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhh
Confidence 00010 0 0111223344444444445555554444444433321 111111110000 0
Q ss_pred ---cccchhhhHH-HHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhccc
Q 017429 319 ---NYSTQMVGEV-LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSVA 369 (371)
Q Consensus 319 ---~~s~~~~~~~-~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 369 (371)
..+.. .-+. ..+..+..+.+. ++.+++.||+|||+.+..+++++.+.+.
T Consensus 374 ~~c~~s~~-~dYrdllitslaefPGl-LIt~~iverlGRKkTMal~l~~f~iflf 426 (528)
T KOG0253|consen 374 ANCPLSVA-KDYRDLLITSLAEFPGL-LITGVIVERLGRKKTMALSLILFGIFLF 426 (528)
T ss_pred hcCCccch-hHHHHHHHHHHhhCCch-hHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 00111 1111 234456666766 5889999999999999999888777654
No 95
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.83 E-value=7.5e-18 Score=143.95 Aligned_cols=260 Identities=16% Similarity=0.114 Sum_probs=209.6
Q ss_pred cccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHH
Q 017429 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (371)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (371)
-....+.|.++.+.+++|+|.++ .|+++++..+...+.+++..+++.|+|.++.+..++++.+++.++-... +
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~ 98 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-G 98 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-c
Confidence 35577889999999999999999 9999999999999999999999999999999999999999999998877 7
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCc
Q 017429 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (371)
Q Consensus 135 ~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~ 213 (371)
...++.+-.+.|.+.+..++. +.++-+.||++ -+..++++....++|+.+++.+...+.+. ..
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~---------------~~ 162 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQH---------------SG 162 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHh---------------hc
Confidence 778889999999999999996 99999999875 68899999999999999999999988872 12
Q ss_pred cchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHH
Q 017429 214 PYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (371)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (371)
+|+....+-+..++++++.++ |...++...+. ....++...++|+|.-|...+.+.+
T Consensus 163 gW~~aL~~WAl~allAl~~Wl--Pq~~r~~~~~~---------------------~~~~~~~~~vw~~~~aW~vtLfmGl 219 (395)
T COG2807 163 GWRGALGFWALLALLALLIWL--PQALREQAASI---------------------ATKLVSVRKVWRSPLAWQVTLFMGL 219 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHh--hhccccccccc---------------------ccccccccccccCchhHHHHHHHHh
Confidence 456555555666655555544 44322211110 0111234568999999999999999
Q ss_pred HHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHhhhhc
Q 017429 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVNFEHS 367 (371)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~~~~~~~~~~~~~~~~ 367 (371)
.+...+....|+|.++.+ .|+|+.++|.+.+...+..++.++ ..+.+.+|. ++|+.......++.++
T Consensus 220 qS~~~Y~~~~WLP~ili~------~G~sa~~aG~llsl~~l~~~~~~l-l~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 220 QSLLYYIVIGWLPAILID------RGLSAAEAGSLLSLMQLAQLPTAL-LIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hHHHHHHHHHHHHHHHHH------cCCCHHHhhhHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHH
Confidence 999999999999999988 599999999999999999999994 778888764 4555555544444443
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.82 E-value=1.1e-20 Score=165.46 Aligned_cols=317 Identities=14% Similarity=0.101 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhh-cccccc-ccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKRE-EDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
.+.......+.+.++...++...|.+...+ |.+++. +.-+...+.+..+..+|.++|++++|+++||+|||+++...+
T Consensus 42 ~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~l 121 (538)
T KOG0252|consen 42 AIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKEL 121 (538)
T ss_pred HHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHH
Confidence 334555677778888888888777665443 322111 111122788889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHH-------HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 120 ASVVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 120 ~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
++..++++++++.. -.+++...|+++|+|.|.-.|. .+..+|...++.||...+...+..+.|...|.+++-
T Consensus 122 iImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~ 201 (538)
T KOG0252|consen 122 IIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVAL 201 (538)
T ss_pred HHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHH
Confidence 99999998777632 3578899999999999998886 889999999999999888876666666665555444
Q ss_pred hhcCcCCCCCCccccc---ccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhh----h--h
Q 017429 192 FLAQPAEKYPNLFSSE---SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESA----S--A 262 (371)
Q Consensus 192 ~l~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~----~--~ 262 (371)
.+.....+ .++-+ .-- ..-||..+.+.++.++..+...+.+||+++......++.+...++.++. . +
T Consensus 202 Iv~~~fe~---~~~~~~~~~~l-d~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~ 277 (538)
T KOG0252|consen 202 IVSAIFEK---IFNGPSTYPHL-DGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAE 277 (538)
T ss_pred HHHHHHhc---cCCCCCCchHH-HHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchh
Confidence 43221110 01110 001 3458988888888888888888899999876522211111000111000 0 0
Q ss_pred hhhhhcccCCcc----ccccccc---cchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhH--------
Q 017429 263 EVKEEEGREATP----KKSLLKN---WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE-------- 327 (371)
Q Consensus 263 ~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-------- 327 (371)
+..+...+.+.. +...+.. +.+......++++-...++.+.+....+.. .|+.+....+
T Consensus 278 ~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~------ig~~~~~~~~~~~~~vA~ 351 (538)
T KOG0252|consen 278 STAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA------IGVIPSANTYHELFKVAE 351 (538)
T ss_pred hccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh------hccCCCcchHHHHHHHHH
Confidence 000001111111 1111211 333445556666655555555444444332 4554444333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
...+...++.+-...+...+.|++||+++.+.|+.++.+..
T Consensus 352 ~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~ 392 (538)
T KOG0252|consen 352 GNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFF 392 (538)
T ss_pred HHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHH
Confidence 11222222222122355567899999999999988876644
No 97
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.79 E-value=2.2e-17 Score=148.81 Aligned_cols=203 Identities=16% Similarity=0.263 Sum_probs=162.0
Q ss_pred cccCCChhHHHHHHHHHHHhhcccccchhhHHHHHHh--hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 017429 34 TKSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (371)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 111 (371)
+..+.+||.++...+..++.....+.+.+..-.+.++ .+.+.+. .|++.++..++..++++.+|.++.|.+.
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~~ 100 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTGS 100 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcch------hhHHHHHHHHHHHhcchhhcccccccCC
Confidence 3445678889999999999999999998888777777 5555555 9999999999999999999999999997
Q ss_pred -chHHHHHHHHHHHHHHHH-Hh---HH-HHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhH
Q 017429 112 -KPVIIMGTASVVIFNTLF-GL---SV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (371)
Q Consensus 112 -r~~l~~~~~~~~~~~~~~-~~---~~-~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (371)
|+.++.+.++.++++++. ++ .+ .-+.++++|++.|+|.|......+|+++....++|.++++....+..+|..+
T Consensus 101 ~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~il 180 (488)
T KOG2325|consen 101 VKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIIL 180 (488)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHH
Confidence 899999999999999988 33 23 5788999999999999999999999999999999999999999988999999
Q ss_pred HHhhhhhhcCcCC-CCCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCC
Q 017429 186 GPALGGFLAQPAE-KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDD 246 (371)
Q Consensus 186 g~~i~~~l~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~ 246 (371)
||.++..+..... ++ .+.+... ...+..+.++++++.++.++ ..++++|.++...++
T Consensus 181 Gp~~q~~f~~Lg~~G~--~i~~~~~--~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~ 239 (488)
T KOG2325|consen 181 GPTIQLAFTPLGEKGF--MILPGLI--FNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDK 239 (488)
T ss_pred hHHHHHHHhhhcCCce--EEcCcce--EEecchHHHHHHHHHHHHHHHHHhheeecccCcccc
Confidence 9999888765321 11 1111111 23466777888888877654 566778877655443
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.79 E-value=1.3e-17 Score=156.63 Aligned_cols=166 Identities=16% Similarity=0.154 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh-cCCchHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG 118 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~ 118 (371)
+.++.++...++..+..+...+.++. +.+++|++..+ .+++.+.+........+++|+++|| +|||+.++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 34566667777777777777777764 45889999888 7787777766666667899999999 5999999999
Q ss_pred HHHHHHHHHHHHhHH-HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccc--hhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.++.+++..++++++ +.+.+++.|++.|++.|...+. .++++|++|+++ |..++++++.+.++|..+||.+++++.
T Consensus 95 ~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 95 AIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888764 4566778899999998887775 899999998653 456788889999999999999999998
Q ss_pred CcCCCCCCcccccccccCccchhHHHHHHHHHHH
Q 017429 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG 228 (371)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 228 (371)
+ .++|+..|.+.++..++
T Consensus 175 ~----------------~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 175 A----------------KYGWSVAFALSVVGMLI 192 (500)
T ss_pred H----------------hhCHHHHHHHHHHHHHH
Confidence 8 55666666665543333
No 99
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=2.8e-16 Score=142.50 Aligned_cols=276 Identities=16% Similarity=0.244 Sum_probs=194.5
Q ss_pred HHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC-CchHHHHHHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVVI 124 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~ 124 (371)
+....++.....+...|+++.+.++.|.+..| +|.+.++..+..+++++++|.++||.+ +|+.+.+..++.++
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~ 80 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 44555666677777889999999999999999 999999999999999999999999986 57888788887777
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh-hhhcCcCCCCCC
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG-GFLAQPAEKYPN 202 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~-~~l~~~~~~~~~ 202 (371)
........++++.+++..++..+......|. .++..+... +++.-.|-.-...++|-.++.... +.+...
T Consensus 81 ~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~------ 152 (400)
T PF03825_consen 81 ALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY------ 152 (400)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh------
Confidence 7777777888888888877777776666664 666666554 234445556666666666664432 222220
Q ss_pred cccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccccc
Q 017429 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (371)
Q Consensus 203 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
.+ .......+++.+...++.....+.+|+.|+++..+++.++ ....+..+++|+|
T Consensus 153 -~~------~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~------------------~~~~~~~~llk~~ 207 (400)
T PF03825_consen 153 -LG------ISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVKK------------------LLGLDALKLLKNP 207 (400)
T ss_pred -hc------cccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCccc------------------ccchHHHHHhcCc
Confidence 00 1111223344444444444456677877633222211111 1112335789999
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Q 017429 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (371)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 362 (371)
++....+..++.......++++.+.|+.+. -|.+....+.+++...+..++.- ...+++.+|+|.++++.++++
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~-----gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a~~ 281 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQEL-----GGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLALV 281 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----ccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 999888888888888888999999998774 22777888888888888888877 578999999999999988887
Q ss_pred hhhh
Q 017429 363 NFEH 366 (371)
Q Consensus 363 ~~~~ 366 (371)
..++
T Consensus 282 ~~~v 285 (400)
T PF03825_consen 282 AYAV 285 (400)
T ss_pred HHHH
Confidence 7543
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.76 E-value=6.1e-17 Score=148.67 Aligned_cols=305 Identities=15% Similarity=0.113 Sum_probs=183.6
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh----hcCCchHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVI 115 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~l 115 (371)
.++++.+....+...+......+..+.+.+++|.+... .+++..+..+...+.+|+.|.++| |+||||.+
T Consensus 3 ~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~ 76 (477)
T TIGR01301 3 LRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF 76 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH
Confidence 35566666666666777788888888899999999988 999999999999999999999999 59999998
Q ss_pred HHH-HHHHHHHHHHHHhHHHHH-----------------HHHHHHHHHhhhccchhH-HHHHHhhhccccch--hhhhHh
Q 017429 116 IMG-TASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQ--ALGLST 174 (371)
Q Consensus 116 ~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r--~~~~~~ 174 (371)
+.+ .+..+++.++++++++.. ..+++-.+..++.....+ ..++++|.+|+++| +.+.++
T Consensus 77 il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 77 IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 875 666666667776655532 222233333445554444 59999999998865 578899
Q ss_pred hhhhhhhHHhHHHhhhhhhcCcCCCCCCccccc-----ccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCc
Q 017429 175 VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE-----SLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDD 248 (371)
Q Consensus 175 ~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~ 248 (371)
.+...++|+++|+.++++..... .+++. ... ..+.+..|++.++..++. ++..+..||.+....++.+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~ 230 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYK-----IFPFTKTEACGVS-CANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHH-----hcccccccccccc-cchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch
Confidence 99999999999999998752100 01100 000 224567777777666654 4456778887643221110
Q ss_pred cchhhhhhhhhhhhhhhhhcccCCcccccccc-ccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccch----
Q 017429 249 SCDVSYDALESASAEVKEEEGREATPKKSLLK-NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ---- 323 (371)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---- 323 (371)
++ +.++..+. +.+...+.-++.+.+ .+.++..+++.++..+..+.+..+.+.|..+.. ++-++.
T Consensus 231 ~~-----~~~~~~~~--~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v----~~~~~~~~~~ 299 (477)
T TIGR01301 231 NS-----EAAPPSKH--GEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREV----YGGSVNQGAK 299 (477)
T ss_pred hh-----hccccccc--chhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH----cCCCCcchhH
Confidence 00 00000000 000000011222222 345666777777665555555544444433211 111110
Q ss_pred --h----hhHHHHHHHHHHHHHHHHHHHHHHHHhch-hHHHHHHHHhhhhcc
Q 017429 324 --M----VGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVNFEHSV 368 (371)
Q Consensus 324 --~----~~~~~~~~~~~~~~~~~~~~~~l~~r~~~-~~~~~~~~~~~~~~~ 368 (371)
+ -.+....+++...+.+ ++..++.+|+|+ |+....+.++.++|+
T Consensus 300 y~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l 350 (477)
T TIGR01301 300 YDDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICL 350 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 1 1223344445555656 467889999985 555566655555554
No 101
>PTZ00207 hypothetical protein; Provisional
Probab=99.76 E-value=1.2e-16 Score=149.69 Aligned_cols=129 Identities=13% Similarity=0.151 Sum_probs=108.5
Q ss_pred ccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH-----
Q 017429 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----- 132 (371)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----- 132 (371)
+.++.+.+.+.+++|++..+ .+++.++. .....++++.|++.||+|||+++.++.++..++.++++++
T Consensus 44 y~fsv~s~~L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45567778999999999998 88887763 3445677889999999999999999999999999999987
Q ss_pred -HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhH-HHhhhhhhc
Q 017429 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLA 194 (371)
Q Consensus 133 -~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~i~~~l~ 194 (371)
.+++.+++.|++.|++.+...+. ...+.+++| ++||++.|+...+.++|..+ +++..+++.
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999998877664 778889986 67999999999999999975 555555543
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.74 E-value=7.7e-17 Score=150.12 Aligned_cols=296 Identities=14% Similarity=0.053 Sum_probs=185.9
Q ss_pred ChhHHHHHHHHHHHhhcccccchh-hHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC-----Cc
Q 017429 39 PITELFSIWIIVLCTALPISSLFP-FLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RK 112 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr 112 (371)
+...+..+....+..++. +.... ..+.+.+++|++.++ ++...+...+...+-.+ +|+++||++ ||
T Consensus 24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr 95 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKR 95 (468)
T ss_pred cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccch
Confidence 334455566677788887 55444 445666679999999 98889999999888555 999999998 77
Q ss_pred hHHHHHHHHHH-HHHHHHHhHHHHH-HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhh---hhhhhhHHhHH
Q 017429 113 PVIIMGTASVV-IFNTLFGLSVNFW-MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV---STAWGIGLIIG 186 (371)
Q Consensus 113 ~~l~~~~~~~~-~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~---~~~~~~g~~~g 186 (371)
+.++++.++.. +.....+..++.. ...+..++.+++.+...++ -++..|..+ +++....+.. .....+|..+|
T Consensus 96 ~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg 174 (468)
T TIGR00788 96 WYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLIS 174 (468)
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHH
Confidence 87888776663 4433333334433 3334778888888887775 999999998 5554433333 33345899999
Q ss_pred HhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhh
Q 017429 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (371)
Q Consensus 187 ~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (371)
+.++|.+.+ .++|+..+.+.+...++..+..+++||++.....+.++.+..... .......+
T Consensus 175 ~~l~G~l~~----------------~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~--~~~~~~~~ 236 (468)
T TIGR00788 175 SLLGGPLLD----------------KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMA--LLTLGVLA 236 (468)
T ss_pred HHHHHHHHH----------------hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhh--hhhhhHHH
Confidence 999999988 556777777777776666666778888642111111000000000 00000000
Q ss_pred hcccCCccccccccccchHHHHHHHHH-HHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHH
Q 017429 267 EEGREATPKKSLLKNWPLMSSIIVYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (371)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
...+.....++.+++|.++...+..++ +....... .+.+.. ....+|+++.+.|.+....+++.+++.. +.+
T Consensus 237 ~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~---~~~f~~---~~~~lG~s~~~~G~~~~~~~v~~i~g~~-~~~ 309 (468)
T TIGR00788 237 NVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGAS---GSVFCA---TTQCLPGGPSFSGMSKVVGNLGSLCGVG-GYD 309 (468)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCC---ceeEEE---EcccCCCCcchhhhHHHHHHHHHHHHHH-HHH
Confidence 000001223345667777765554444 22111111 111111 1123899999999999999999999885 667
Q ss_pred HHHHHhchhHHHHHHHHhhhhcc
Q 017429 346 FLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 346 ~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
+..+|++.|+++.++.++.+++.
T Consensus 310 ~~~~~~~~r~~l~~~~~l~~~~~ 332 (468)
T TIGR00788 310 RFLKTFPYRLLFGVTTLLYTLSS 332 (468)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHH
Confidence 77789999999998888777644
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.73 E-value=8.7e-17 Score=150.56 Aligned_cols=282 Identities=12% Similarity=0.081 Sum_probs=173.2
Q ss_pred HHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh----hcCC-chHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR-KPVIIMGT 119 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~ 119 (371)
..+..+...+......++++ ++.+.+|++... +|.+..+.-+..++..|+.|.++| |+|| |+.++++.
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~ 84 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGT 84 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhh
Confidence 33444444455555566665 556667999999 999999999999999999999999 6698 56666777
Q ss_pred HHHHHHHHHHHhHH------HHHHHHHHHHHHhhhccchhH-HHHHHhhhc-cccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 120 ASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 120 ~~~~~~~~~~~~~~------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
+..+++..++...+ .+..+++..++.+++.....+ ..++.+|+. ++++|.+..+.-..+.++|+.+.+.+..
T Consensus 85 i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 85 LANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777765554322 233455555666776666555 488899998 5889999888877777777666655544
Q ss_pred hhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhccc
Q 017429 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (371)
Q Consensus 192 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
.+.+..++... ..+|+....+.++..++.. +..+..||.+.....+.+++ ++.+
T Consensus 165 ~~~~~~g~~~~---------~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~----------------~~~~ 219 (473)
T PRK10429 165 PFVNYVGGGDR---------GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEG----------------SHLT 219 (473)
T ss_pred HHHHHhCCCch---------hhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccc----------------cCCC
Confidence 43321110000 2234544445444444433 33444666532211100000 0011
Q ss_pred CCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 350 (371)
.....+.+++||+++..++..++............++|.... .+ +....+.+....+++.+++. ++.+++.||
T Consensus 220 ~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r 292 (473)
T PRK10429 220 LKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV-----IG-DADLFPYYLSYAGAANLVTL-ILFPRLVKS 292 (473)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE-----CC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 122344567888888777777766655555544544343332 22 45556666666667777777 577899999
Q ss_pred hchhHHHHHHHHhhh
Q 017429 351 LGPIMVARIAGVNFE 365 (371)
Q Consensus 351 ~~~~~~~~~~~~~~~ 365 (371)
+|+|+.+..+.++.+
T Consensus 293 ~gkk~~~~~~~~~~~ 307 (473)
T PRK10429 293 LSRRILWAGASIFPV 307 (473)
T ss_pred cCcHHHHHHHHHHHH
Confidence 999999876665544
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.73 E-value=1.6e-16 Score=147.77 Aligned_cols=284 Identities=17% Similarity=0.060 Sum_probs=171.7
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhH-HHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh----cCCc-
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRK- 112 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr- 112 (371)
++++.+.-.+..+...+.......++ +++.+++|++..+ +|.+.++..+...+..|+.|.++|| +|||
T Consensus 7 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrr 80 (444)
T PRK09669 7 TTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFR 80 (444)
T ss_pred cHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCcc
Confidence 34444433333333333333334444 4677889999999 9999999999999999999999998 7874
Q ss_pred hHHHHHHHHHHHHHHHHHhHH------HHHHHHHHHHHHhhhccchhH-HHHHHhhhc-cccchhhhhHhhhhhhhhHHh
Q 017429 113 PVIIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLI 184 (371)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~ 184 (371)
+.++.+.+..++...+....+ ....+++..++.+.+.....+ ..++.+|+. ++++|.+..+....+..+|..
T Consensus 81 p~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~ 160 (444)
T PRK09669 81 PYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL 160 (444)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 555567677766665544432 245566666666665444444 488999987 567899888888888888888
Q ss_pred HHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhh
Q 017429 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (371)
Q Consensus 185 ~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (371)
+++.+...+....++.. . +.+|+..+.+.+++.++..+ ..+..+|......++
T Consensus 161 i~~~~~~pl~~~~~~~~--------~-~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~----------------- 214 (444)
T PRK09669 161 IVSVIALPLVDILGKGD--------E-QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDN----------------- 214 (444)
T ss_pred HHHHHHHHHHHHhCCCc--------h-hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcC-----------------
Confidence 87776655443211000 0 34566656665555544433 334445532211000
Q ss_pred hhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHH
Q 017429 264 VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 343 (371)
+.+..+..+.+++||+++..++..++.............+|.... .+ ++...+.+.....+..+++. ++
T Consensus 215 ----~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~~ 283 (444)
T PRK09669 215 ----SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYV-----LL-RPDLATLFLVTGMIAGLFGA-LL 283 (444)
T ss_pred ----CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeee-----cC-CHHHHHHHHHHHHHHHHHHH-HH
Confidence 001123456778899988877766655544444344333333222 22 23333444444445556655 57
Q ss_pred HHHHHHHhchhHHHHHHHHhhh
Q 017429 344 YPFLERILGPIMVARIAGVNFE 365 (371)
Q Consensus 344 ~~~l~~r~~~~~~~~~~~~~~~ 365 (371)
.+++.||+|+|+....+.+...
T Consensus 284 ~~~l~~r~gk~~~~~~~~~~~~ 305 (444)
T PRK09669 284 SERLLGKFDRVRAFKWTIVAFV 305 (444)
T ss_pred HHHHHHHhChHHHHHHHHHHHH
Confidence 7899999999998877665444
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.73 E-value=1.6e-15 Score=139.93 Aligned_cols=170 Identities=14% Similarity=0.227 Sum_probs=131.1
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-CCchHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMG 118 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~ 118 (371)
+.++.++...+...+..+.....+|.+ .+++|.++.+ .+.+.+.+.....++.+++|+++||+ ||||+++++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 455566666677777777777788755 5668999998 99999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHhHH-HHHHHHHHHHHHhhhccchhH-HHHHHhhhcccc--chhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.++..++.++++... +...+++...+.+++.|...+ ..++++|.+|++ +|.+++++.+.+.++|+.++|.+.+++.
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~ 162 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ 162 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887766533 223344444445566666656 488999999975 6999999999999999999999999998
Q ss_pred CcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHH
Q 017429 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA 232 (371)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (371)
+ .++|+..|...++..++.++.
T Consensus 163 ~----------------~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 163 E----------------EYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred h----------------hhChHHHHHHHHHHHHHHHHH
Confidence 7 556666666655444444433
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.70 E-value=1.3e-16 Score=147.73 Aligned_cols=266 Identities=15% Similarity=0.129 Sum_probs=188.6
Q ss_pred hHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh----hcCCchH-HHHHHHHHHHHHHHHHhH-H---
Q 017429 63 FLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV-IIMGTASVVIFNTLFGLS-V--- 133 (371)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~--- 133 (371)
..+.+.+.+|++... .|++..+.-+..++..|+.|.++| |+||||. ++++.+..+++..++... +
T Consensus 24 ~~~f~~~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~ 97 (428)
T PF13347_consen 24 LLYFYTDVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGL 97 (428)
T ss_pred HHHHHHHHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchh
Confidence 345677778999988 999999999999999999999999 8997655 456778888877776654 3
Q ss_pred ----HHHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCccccc
Q 017429 134 ----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (371)
Q Consensus 134 ----~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~ 207 (371)
...++.+..++..++...... ..++.+|+.+ +++|.+..+.-+.+..+|..+...+.+.+.+..++...
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~----- 172 (428)
T PF13347_consen 98 SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDT----- 172 (428)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcc-----
Confidence 223456666666777666555 4899999997 57899999998888888887777777777653221100
Q ss_pred ccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHH
Q 017429 208 SLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (371)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
..+|+....+.+++.++.. +..+..||.+++..+++ ++.+..+..+++++||+++.
T Consensus 173 ----~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~-------------------~~~~~~~~~~~~~~nr~~~~ 229 (428)
T PF13347_consen 173 ----SNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQE-------------------KKISLRDSLRSLFRNRPFRI 229 (428)
T ss_pred ----chHHHHHHHHHHHHHHHHhhhhhheeeeccccccccc-------------------cccccccchhhhcccchHHH
Confidence 1146666666665555543 44566677211111111 12223456788899999998
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhh
Q 017429 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEH 366 (371)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 366 (371)
.....++............++|.... .|.+ ...+.+.....++.+++. ++.+++.||+|+|+.+..+.++.++
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHH
Confidence 88888888777777777777777665 4444 456666677777878877 5789999999999999988888776
Q ss_pred ccc
Q 017429 367 SVA 369 (371)
Q Consensus 367 ~~~ 369 (371)
+.+
T Consensus 303 ~~~ 305 (428)
T PF13347_consen 303 GFL 305 (428)
T ss_pred HHH
Confidence 544
No 107
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.69 E-value=2e-18 Score=161.48 Aligned_cols=312 Identities=17% Similarity=0.201 Sum_probs=2.9
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+++..+.+.+..+.....++.+.++|+++.++ .|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 345555666666666677788999999999999 99999999999999999999999998888888899999999
Q ss_pred HHHHHHhHH--------------------------------------------------HHHHHHHHHHHHhhhccchhH
Q 017429 125 FNTLFGLSV--------------------------------------------------NFWMAVLTRFLLGSLNGLLGP 154 (371)
Q Consensus 125 ~~~~~~~~~--------------------------------------------------~~~~~~~~r~l~G~~~~~~~~ 154 (371)
+.+++++.+ -+..++++.++.|+|.....+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 988876411 124677888999999999888
Q ss_pred H-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCC-------cccccccccCccchhHHHHHHHHH
Q 017429 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-------LFSSESLFGKFPYFLPCLCISLFA 226 (371)
Q Consensus 155 ~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~ 226 (371)
. .+|+-|..++++-+..+|+.++...+|.++|-++++.+.+...++.. .-..+..| -..||.-|++.+.+.
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W-vGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW-VGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH-HHHHHHHHHHHHHHH
Confidence 7 99999999999999999999999999999999999988764222211 11112223 446888888888888
Q ss_pred HHHHHHHhhccccccCCCCCCccchh---hhhhhhhhhhhh-------hhhcccCCccccccccccchHHHHHHHHHHHh
Q 017429 227 FGVTIAAFWLPETLHRHNDDDDSCDV---SYDALESASAEV-------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (371)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
++..+..+++|+..+...+..+.++. ..++.+...... .+..++-+...+++++||.+....+.......
T Consensus 240 ~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 77777777777654443111111000 000000000000 11223445567889999999999999999999
Q ss_pred hhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhch--hHHHHHHHHhhhhcc
Q 017429 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP--IMVARIAGVNFEHSV 368 (371)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~--~~~~~~~~~~~~~~~ 368 (371)
...++.++.|-|++.. ++.++..++++.....+.+.+...+++|++.+|++. |+.+.++.+...+++
T Consensus 320 ~~~G~~tF~pKylE~Q-----F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~ 388 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQ-----FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSV 388 (539)
T ss_dssp --------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHH-----hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 9999999999998887 899999999999888887776666899999998754 455555555544443
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.68 E-value=3.6e-15 Score=138.95 Aligned_cols=282 Identities=17% Similarity=0.119 Sum_probs=165.0
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc----CCch
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRKP 113 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----Grr~ 113 (371)
+++..+.-.+..+...+......++++ ++.+.+|++..+ +|.+.+...+..++..++.|+++||. ||||
T Consensus 6 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~ 79 (448)
T PRK09848 6 SWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFR 79 (448)
T ss_pred cHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCch
Confidence 334444333444444444444555554 566677999999 99999999999999999999999986 7776
Q ss_pred HH-HHHHHHHHHHHHHH-HhH------HHHHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHhhhhh-----
Q 017429 114 VI-IMGTASVVIFNTLF-GLS------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTA----- 178 (371)
Q Consensus 114 ~l-~~~~~~~~~~~~~~-~~~------~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~----- 178 (371)
.. .++.+...+...+. ... ......++..++.+++.+...+ ..++..|+.+ +++|.+..+.-..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~ 159 (448)
T PRK09848 80 PFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTF 159 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 54 55555444443332 211 1223344455666777666665 3666677654 46788776655443
Q ss_pred hhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhh
Q 017429 179 WGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDAL 257 (371)
Q Consensus 179 ~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 257 (371)
..++..++|.+++..... . ..+|.....+.+++.++. ++.....||+++.+.++
T Consensus 160 ~~~~~~~~p~i~~~~g~~-------~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----------- 214 (448)
T PRK09848 160 VCLAFLIGPSIKNSSPEE-------M-------VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----------- 214 (448)
T ss_pred HHHHHHHHHHHHHhCCCc-------h-------hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC-----------
Confidence 234555666666543210 0 001111112222222222 22333445543211110
Q ss_pred hhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHH
Q 017429 258 ESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLL 337 (371)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 337 (371)
......++.+++||+++...+..++............++|.... +|.++...++......++.+
T Consensus 215 -----------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~ 278 (448)
T PRK09848 215 -----------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYV-----LNDTGLFTVLVLVQNLVGTV 278 (448)
T ss_pred -----------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeee-----cCChHHHHHHHHHHHHHHHH
Confidence 01112356788999998888777777666666666666666554 67666555554444455566
Q ss_pred HHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 338 VFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 338 ~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
++. ++.+++.||+++|+.+..+.++..++.
T Consensus 279 ~~~-~l~~~l~~r~g~~~~~~~g~~~~~i~~ 308 (448)
T PRK09848 279 ASA-PLVPGMVARIGKKNTFLIGALLGTCGY 308 (448)
T ss_pred HHH-HHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 666 578899999999999988877765543
No 109
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.68 E-value=3.3e-16 Score=146.93 Aligned_cols=310 Identities=16% Similarity=0.186 Sum_probs=236.1
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
.+.+..+...+....+...+..+.++|+++.++ .|++.+.+-++..+...+..++.-|.-|-+.+-+|+++.++
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 455666777777777777888999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhHH-------------------H--------------------------------HH-HHHHHHHHHhhhccch
Q 017429 125 FNTLFGLSV-------------------N--------------------------------FW-MAVLTRFLLGSLNGLL 152 (371)
Q Consensus 125 ~~~~~~~~~-------------------~--------------------------------~~-~~~~~r~l~G~~~~~~ 152 (371)
+.+++++.+ + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 999887621 0 22 5667789999999999
Q ss_pred hHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC-CCc---ccccccccCccchhHHHHHHHHHH
Q 017429 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNL---FSSESLFGKFPYFLPCLCISLFAF 227 (371)
Q Consensus 153 ~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~-~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 227 (371)
.+. .+|+-|...+++-...+|+..+...+|.++|-++++++.....++ ... ..-+..| -..||.-|++.+.+.+
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW-IGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW-IGAWWLGFLICGALLL 333 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch-hhHHHHHHHHHHHHHH
Confidence 887 999999999999999999999999999999999999987654333 111 1112233 5568999999999999
Q ss_pred HHHHHHhhccccccCCCCCCccchhhhhhhhhh----hhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHH
Q 017429 228 GVTIAAFWLPETLHRHNDDDDSCDVSYDALESA----SAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 303 (371)
Q Consensus 228 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (371)
+..+.++++|+..++...+.+..+......++. .....+...+-+...+++++||-+...++...+......++.+
T Consensus 334 ~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 334 FSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred HHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 888888888877655433211111110000000 0000011123345567889999999999999999999999999
Q ss_pred HHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--hhHHHHHHHHhhhh
Q 017429 304 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVNFEH 366 (371)
Q Consensus 304 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~--~~~~~~~~~~~~~~ 366 (371)
++|-|+... +|.++..+..+.+..++..+...++++|++.+|+. .|....+.++...+
T Consensus 414 FlPKyLE~Q-----fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 414 FLPKYLETQ-----FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred hhHHHHHHH-----cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 999999888 99999999999999999998888889999999774 44444444444333
No 110
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.68 E-value=2.3e-15 Score=141.70 Aligned_cols=174 Identities=16% Similarity=0.250 Sum_probs=125.0
Q ss_pred HHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHH-
Q 017429 51 LCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL- 128 (371)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~- 128 (371)
++.....+....+.|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+.+..+.++..+..+.
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 333 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPA 333 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 333444555566777665 567888776 777778888999999999999999999999988887654433322
Q ss_pred H--HhHHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCccc
Q 017429 129 F--GLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (371)
Q Consensus 129 ~--~~~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g 205 (371)
. ..+++...+++.+++.|++.+.... ...+++|.+|++.|+++++..+....+++.++|.+.+++.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~--------- 404 (490)
T PRK10642 334 FILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES--------- 404 (490)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 2 2234566777888888886555444 478889999999999999975444556667889999888762
Q ss_pred ccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCC
Q 017429 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (371)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (371)
..+|+.++.+..+.+++.++..+++||++++..+
T Consensus 405 ------~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 405 ------TQNLMMPAYYLMVVAVIGLITGVTMKETANRPLK 438 (490)
T ss_pred ------hCCchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 1234555556666666666677788999887554
No 111
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.67 E-value=3.6e-15 Score=133.05 Aligned_cols=284 Identities=15% Similarity=0.150 Sum_probs=170.0
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+..+......+...+..+...|+.+...++ .|++.++ +|.+.++..+...+.+|+.|.++||.|.||-++...
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i 80 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH
Confidence 455666666667777788888999877764 8999999 999999999999999999999999999766655443
Q ss_pred HHHHH--HH-HHHHhHHHH-HHHHHHHHHHhhhcc----chhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 120 ASVVI--FN-TLFGLSVNF-WMAVLTRFLLGSLNG----LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 120 ~~~~~--~~-~~~~~~~~~-~~~~~~r~l~G~~~~----~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
.+..+ +. +...+.+-. ..+.++-++.|+..+ ...++ -+++.+.. ++.+.-.|-.-...++|.+++..++
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~ 158 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLA 158 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHh
Confidence 32221 21 111222211 112223333333322 22232 33333332 2233445666778889999999999
Q ss_pred hhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc-cccccCCCCCCccchhhhhhhhhhhhhhhhhcc
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (371)
|.+.+ . +....+++....+++..++.+.. |+.++.....+.. +.. +++
T Consensus 159 G~L~~----------------i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~-~~~-------------~~~ 207 (412)
T PF01306_consen 159 GILFN----------------I-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADAL-GAK-------------KDK 207 (412)
T ss_dssp HHHHH----------------H-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTS-SS-----------------
T ss_pred heeee----------------e-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccc-ccC-------------CCC
Confidence 99875 1 12334455555555444443333 3333221111100 000 000
Q ss_pred cCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (371)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (371)
...+...+++|+|++|...+...........+...++.|....... .+.+....|++.+...+..++.. .+.+++.+
T Consensus 208 ~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~--~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~ 284 (412)
T PF01306_consen 208 VSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQS--AGQGNQMYGYLWSVQVFLEALMM-FFSPWLIN 284 (412)
T ss_dssp --HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred CcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccChhHHhHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1112346788999999888776666666667766677776554222 35566779999998888888877 58899999
Q ss_pred HhchhHHHHHHHHhhhh
Q 017429 350 ILGPIMVARIAGVNFEH 366 (371)
Q Consensus 350 r~~~~~~~~~~~~~~~~ 366 (371)
|+|.|+.++++..++.+
T Consensus 285 rig~k~~Lllag~i~~i 301 (412)
T PF01306_consen 285 RIGAKNLLLLAGVIMAI 301 (412)
T ss_dssp HH-HHHHHHHHHHHHHH
T ss_pred hcChHhHHHHHHHHHHH
Confidence 99999999887776543
No 112
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.67 E-value=1.8e-15 Score=146.12 Aligned_cols=141 Identities=14% Similarity=0.108 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhH-HHHHHhhhc
Q 017429 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIF 163 (371)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~ 163 (371)
.+...+..++.+++.++.|+++||+|||++++++.++.+++.++.++.++...+++.+++.|++.+...+ ..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445667788899999999999999999999999999999999888888888888888888886555555 499999999
Q ss_pred cccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccC
Q 017429 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (371)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (371)
|++.|++++|+.+....+|.++||.+++.+.+ . +...++++.++..+++.++.+++||+...
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~----------------~-~~~~pf~i~a~~lll~~ll~~~LPET~~~ 739 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG----------------I-TKAAPILFASAALACGGLLALKLPDTRGQ 739 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------h-hhHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 99999999999999999999999999998875 2 23456677777767766777778987643
No 113
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=3e-15 Score=137.86 Aligned_cols=175 Identities=12% Similarity=0.112 Sum_probs=128.1
Q ss_pred cchhhHHHHHHhhccccccc--cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHH---
Q 017429 59 SLFPFLYFMIKDFQIAKREE--DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--- 133 (371)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--- 133 (371)
......+.+.++.|.+.... ......+...++..++..++.++.|+++||+|||+++..+.++.+++..+.....
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~ 305 (418)
T TIGR00889 226 ITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEY 305 (418)
T ss_pred HHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcch
Confidence 34455566667776553210 0011178889999999999999999999999999999999998888876666532
Q ss_pred -HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhh-hhhhhHHhHHHhhhhhhcCcCCCCCCcccccccc
Q 017429 134 -NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (371)
Q Consensus 134 -~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~ 210 (371)
+.+.+++.+++.|++.+...+. ..+++|.+|+++|++++++.+ ....+|..+||.++|.+.+..++.+
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~--------- 376 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYG--------- 376 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccc---------
Confidence 3456777889999988777775 889999999999999999997 6788999999999999988322100
Q ss_pred cCccchhHHHHHHHHHHH-HHHHHhhccccccCC
Q 017429 211 GKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRH 243 (371)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~ 243 (371)
.++|+..+.+.+++.++ .++..+++||+.+..
T Consensus 377 -~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 377 -TFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 13456555666555554 445567778775443
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.65 E-value=9.4e-15 Score=128.77 Aligned_cols=213 Identities=15% Similarity=0.075 Sum_probs=150.4
Q ss_pred HhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCC-ccccc
Q 017429 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-LFSSE 207 (371)
Q Consensus 130 ~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~-~~g~~ 207 (371)
+...++..+++..++.|.|.+...+. +++++++.++|++.+.+++.+.++++|..++|.+++.+.....+... ..+-.
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999999886 99999999999999999999999999999999999988842100000 00000
Q ss_pred ccccCccchhHHHHHHHHHHHHHHHHhhc--cccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchH
Q 017429 208 SLFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (371)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
... .+.|+.++++.+...++..+.+.+. ||.++++ ++ +.. + ++....++.+++|.++
T Consensus 85 ~~~-~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~--~~---~~~--------------~-~~~~~~~~~~~~~~~~ 143 (310)
T TIGR01272 85 NAE-AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEAD--VA---RVS--------------S-GDTTQKTSAFQFTHLV 143 (310)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccc--cc---ccc--------------c-ccccchhhHHhhHHHH
Confidence 000 1356777775554444443343333 4422110 00 000 0 0001123456788888
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhh
Q 017429 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFE 365 (371)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~ 365 (371)
...+..+++.....+...+.+.|+.+.. .+|+++.+.+...+.+..+.++++ ++++++.||+++++.+..+.++.+
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~---~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPH---ALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHH
Confidence 8888888888899999999999996431 168999999999999999999999 589999999999998877766554
Q ss_pred hc
Q 017429 366 HS 367 (371)
Q Consensus 366 ~~ 367 (371)
++
T Consensus 220 ~~ 221 (310)
T TIGR01272 220 LL 221 (310)
T ss_pred HH
Confidence 43
No 115
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=1.6e-14 Score=132.27 Aligned_cols=157 Identities=15% Similarity=0.196 Sum_probs=124.4
Q ss_pred cchhhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHH
Q 017429 59 SLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (371)
Q Consensus 59 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (371)
.+....|.+ .+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+..+.+...+........++++.
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAI 307 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 344556644 4678988888 888888877888889999999999999999888777666655555555677888
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccch
Q 017429 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (371)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~ 216 (371)
+++.+++.+++.|...+. ..+..|.+|+ +|+++.++++....+|..++|.++|.+.+ .++|+
T Consensus 308 ~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~----------------~~g~~ 370 (393)
T PRK15011 308 LLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE----------------IWNYH 370 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhhhH
Confidence 888888888876665554 7788899885 59999999988899999999999999988 56677
Q ss_pred hHHHHHHHHHHHHHHHHhhccc
Q 017429 217 LPCLCISLFAFGVTIAAFWLPE 238 (371)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e 238 (371)
.++.+.+++.++.++..++.||
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 371 AVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC
Confidence 7777777777777777777765
No 116
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=1.2e-13 Score=121.78 Aligned_cols=277 Identities=12% Similarity=0.099 Sum_probs=184.4
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
|..++...+..+...+..-.+.+...+...-|+ +.+. .-|...+|++.++...+.+-|+.||+|-|...+++.
T Consensus 44 W~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~------~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 44 WVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSA------ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred hHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHH------HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 334445555556666666666666666777777 5555 778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHH------HHH--HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 120 ASVVIFNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 120 ~~~~~~~~~~~~~~------~~~--~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
++.+++..+-..+. .++ ....+..+.+...-.+... ..+..-||++++|..+..+-..+..+|.++|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99999998877643 333 4445666666665555555 45666689999999999999999999999999999
Q ss_pred hhhcCcCCCCCCcccccccccCccchh--HHHHHHHHHHH-HHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhh
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFPYFL--PCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (371)
..+.....+.+ ...|.. .++....++.+ ..+..+..++.|+......+.++.
T Consensus 197 pilV~~~~~~~----------~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~--------------- 251 (480)
T KOG2563|consen 197 PILVPSSKDSE----------DNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ--------------- 251 (480)
T ss_pred ceecCCCCCcc----------hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------
Confidence 88887442111 112222 23333333332 233334444444332221111000
Q ss_pred cccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017429 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (371)
+.+.....++.++|+++....+++........+..+.+..-+.. -|++...+|+......+++++++. +.+.+
T Consensus 252 ~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~------sgY~~~~aG~ig~l~iv~Gmlga~-~~gii 324 (480)
T KOG2563|consen 252 DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP------SGYEGVFAGYIGALMIVAGMLGAL-ASGII 324 (480)
T ss_pred cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc------ccCCccccchhHHHHHHHHHHHHH-HHHhh
Confidence 11234567789999999888888877666655554444322221 466668889998888899999995 77777
Q ss_pred HHHhchhH
Q 017429 348 ERILGPIM 355 (371)
Q Consensus 348 ~~r~~~~~ 355 (371)
.||.+..+
T Consensus 325 ~Dktk~fk 332 (480)
T KOG2563|consen 325 ADKTKKFK 332 (480)
T ss_pred hhhhhhHH
Confidence 77766544
No 117
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=1.4e-16 Score=131.21 Aligned_cols=285 Identities=15% Similarity=0.135 Sum_probs=187.1
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh-cCCchHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVV 123 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~ 123 (371)
..++..|...+.+........++..+.+++.++ ..++-+.|....++.+.++|++.|| +|-|..-++-++...
T Consensus 48 ~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~ 121 (459)
T KOG4686|consen 48 FMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVF 121 (459)
T ss_pred HHHHhcccceeecCCchhhhhhhhcccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHH
Confidence 344444555556666666677888888888888 8889999999999999999999996 687877777777777
Q ss_pred HHHHHHHh---HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 124 IFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 124 ~~~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
++.++++. .+.+|.+.++|++.|+|.-...++ +.+..-++..++-+.++|+......+|..+--.+.+++.+..+.
T Consensus 122 ~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~ 201 (459)
T KOG4686|consen 122 LGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGR 201 (459)
T ss_pred HHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHH
Confidence 77777664 689999999999999987777776 99999999999999999999888899988776776776653211
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (371)
.++-...- ..+-+. .+....+...++...-+ ... +++. +++ .+. ++....+..+..+..
T Consensus 202 ---~~~~~ghT-~LG~~l--~~~~~tc~~slical~l----g~~---D~rA----eri---lh~-e~g~~Ge~pkLtdv~ 260 (459)
T KOG4686|consen 202 ---MFPGVGHT-LLGLWL--CFEVKTCKQSLICALSL----GLS---DDRA----ERI---LHL-EEGFLGEEPKLTDVN 260 (459)
T ss_pred ---hcccchHH-HHHHHH--HHHHHHHHHHHHHHHHh----hhh---hhHH----HHH---Hhh-hcCcccCCccccccc
Confidence 01000000 000000 00011111111111100 000 0000 000 000 000000000111111
Q ss_pred -cccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 280 -KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
-.|++|...+..+++....+-+.+.-+.+.+.. +|+|+..++.+.+.......+.+ ++.+.++|+.|++-..+
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~r-----fGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n~~wv 334 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKR-----FGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFNLWWV 334 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-----hCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhcceehhH
Confidence 257889988888888888888888888777776 99999999999888887787777 58899999999986655
Q ss_pred HHHH
Q 017429 359 IAGV 362 (371)
Q Consensus 359 ~~~~ 362 (371)
.+..
T Consensus 335 ~~a~ 338 (459)
T KOG4686|consen 335 ASAC 338 (459)
T ss_pred HHHH
Confidence 5433
No 118
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.62 E-value=9.8e-14 Score=119.97 Aligned_cols=268 Identities=15% Similarity=0.085 Sum_probs=169.3
Q ss_pred hhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH
Q 017429 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (371)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (371)
...+....+|+...+.+++|.++.+ ++.+....+....+..++.|.++||+|||+.-+..+++..++++.. ..
T Consensus 46 a~~aDWLQGpY~Y~LY~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~ 118 (354)
T PF05631_consen 46 AMAADWLQGPYLYALYESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HS 118 (354)
T ss_pred HHHHHHhhcchhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hc
Confidence 3444556678887777899999999 9999999999999999999999999999999999999999888644 45
Q ss_pred HHHHHHHHHHHHHhhhccchhHH--HHHHhhhc----cccchhhhhHhhh-hhhhhHHhHHHhhhhhhcCcCCCCCCccc
Q 017429 133 VNFWMAVLTRFLLGSLNGLLGPI--KAYACEIF----REEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (371)
Q Consensus 133 ~~~~~~~~~r~l~G~~~~~~~~~--~~~~~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~i~~~l~~~~~~~~~~~g 205 (371)
+++..++++|++.|++......+ .=++.|.- |++..+..++... ...++-.+.+.+++-++.+..
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~-------- 190 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF-------- 190 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh--------
Confidence 78999999999999998887664 44566653 2222222222222 122222333444444444411
Q ss_pred ccccccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccch
Q 017429 206 SESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (371)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (371)
..+...||.....+.++..+. ....+|+.....++.+..+. .....+.+.+||++
T Consensus 191 ------~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~------------------~~~a~~~i~~d~ri 246 (354)
T PF05631_consen 191 ------GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGS------------------FREAWRAILSDPRI 246 (354)
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHH------------------HHHHHHHHHcCchh
Confidence 223356777766666655443 44566765432221111110 11234566778998
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhh
Q 017429 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNF 364 (371)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~ 364 (371)
+...++..++-...+.+....+.-+. ..+ ...-.|++++.+-+..++|+.+....+.++......+...+.+.
T Consensus 247 l~LG~~qslFE~smy~FVflWtPaL~------~~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~a 319 (354)
T PF05631_consen 247 LLLGLIQSLFEGSMYLFVFLWTPALD------PDD-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVA 319 (354)
T ss_pred HHHHHHHHHHHHHHHHheeeeeceec------CCC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 88888777776555544332221111 111 23348999999999999999644355566656555555444444
Q ss_pred hh
Q 017429 365 EH 366 (371)
Q Consensus 365 ~~ 366 (371)
.+
T Consensus 320 a~ 321 (354)
T PF05631_consen 320 AV 321 (354)
T ss_pred HH
Confidence 33
No 119
>PRK11462 putative transporter; Provisional
Probab=99.62 E-value=4.4e-14 Score=131.58 Aligned_cols=277 Identities=14% Similarity=0.035 Sum_probs=170.5
Q ss_pred hhHHHHHHHHHHHhhcccccchhhH-HHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh----cCCchH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPV 114 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~ 114 (371)
+++-+.-.+..+...+.......++ .++.+..|++... +|.+..+.-+--++..|+.|.++|| +||||.
T Consensus 8 ~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp 81 (460)
T PRK11462 8 VKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKFRP 81 (460)
T ss_pred HhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcch
Confidence 3333333333333344444444444 4667788999988 9999999999999999999999995 787655
Q ss_pred -HHHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHhhhhhhhhHHhH
Q 017429 115 -IIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLII 185 (371)
Q Consensus 115 -l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~ 185 (371)
++++.+..+++.+++...++ ...+.+..++..++..+... -.++.+|+.+ +++|.+..+....+..+|..+
T Consensus 82 ~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~ 161 (460)
T PRK11462 82 WVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGML 161 (460)
T ss_pred hHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 55676777777665544331 34455566666776655555 4889999887 788999999999999998888
Q ss_pred HHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhh
Q 017429 186 GPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEV 264 (371)
Q Consensus 186 g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (371)
++.+...+....++... ..+|.....+.+++.++..+. ....+|.++.+.++
T Consensus 162 ~~~~~~plv~~~g~~~~---------~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~------------------ 214 (460)
T PRK11462 162 STVLMMPLVNLIGGDNK---------PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTT------------------ 214 (460)
T ss_pred HHHHHHHHHHHhCCCch---------hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccC------------------
Confidence 87776655442111100 234555445555544444333 33345532211000
Q ss_pred hhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHH
Q 017429 265 KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLY 344 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 344 (371)
.+.++..+..++|++++......++.............+|.... .|. +...+.+.....++.+++. ++.
T Consensus 215 ----~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-----~g~-~~~~~~~l~~~~i~~iig~-~l~ 283 (460)
T PRK11462 215 ----TSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-----LGT-PEVFVAFLTTYCVGNLIGS-ALA 283 (460)
T ss_pred ----CCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-----cCC-hHHHHHHHHHHHHHHHHHH-HHH
Confidence 00112345677888887766555555554444444444444333 332 3334556666777777777 588
Q ss_pred HHHHHHhchhHHHHHH
Q 017429 345 PFLERILGPIMVARIA 360 (371)
Q Consensus 345 ~~l~~r~~~~~~~~~~ 360 (371)
+++.||+++|+....+
T Consensus 284 ~~l~~r~gkk~~~~~~ 299 (460)
T PRK11462 284 KPLTDWKCKVTIFWWT 299 (460)
T ss_pred HHHHHHhChHHHHHHH
Confidence 9999999998876543
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.62 E-value=4.1e-14 Score=129.46 Aligned_cols=291 Identities=20% Similarity=0.305 Sum_probs=186.8
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
...+..+..++......+..+.....++.+... ......+.-.....+...+.++..|.++||+|||..+....+...+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~-~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQL-ENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccc-hhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 444555555555555555555555555443322 1111123333334677789999999999999999999999999888
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhcc---chhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCC
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNG---LLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~ 201 (371)
..+...+.. +++++ +.++..+ ......++++|....++|...+++.+.+...+..++|.+++.+.+
T Consensus 105 ~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~------ 173 (463)
T KOG2816|consen 105 PALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK------ 173 (463)
T ss_pred hHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------
Confidence 887777655 33333 5555333 334459999999999999999999999999999999999999988
Q ss_pred CcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccc
Q 017429 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (371)
Q Consensus 202 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (371)
..+...++.+..+..++..+ ..+++||+..+.+.+.... .+.+.+.... ++..+........-.
T Consensus 174 ----------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (463)
T KOG2816|consen 174 ----------FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATL----RELTPGSLDS-SHVADAFQSLTKVGP 238 (463)
T ss_pred ----------hcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccc----cccCCCcccc-hhhhhhhhhhcccCC
Confidence 56667777777777766544 5778899876544431000 0000000000 000011111112223
Q ss_pred ccchHHHHHHHHHHHhhhhhHHH-HHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Q 017429 281 NWPLMSSIIVYCVFSLHDMAYSE-IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (371)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~ 359 (371)
+|..+..+...++.......-.. ..+.|+..+ ++++..+.+.+.+..++...+++.+..+.+.+.++.++.+..
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~-----f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l 313 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK-----FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL 313 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeee-----cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH
Confidence 44444444444333333222111 234444444 899999999999999999999998888899999999998877
Q ss_pred HHHhhhhc
Q 017429 360 AGVNFEHS 367 (371)
Q Consensus 360 ~~~~~~~~ 367 (371)
|+..-.++
T Consensus 314 Gl~~~~~~ 321 (463)
T KOG2816|consen 314 GLLSEFLQ 321 (463)
T ss_pred HHHHHHHH
Confidence 77665544
No 121
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.61 E-value=3.2e-14 Score=128.33 Aligned_cols=295 Identities=17% Similarity=0.166 Sum_probs=201.5
Q ss_pred CCChhHHHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh----hcCC
Q 017429 37 GLPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR 111 (371)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Gr 111 (371)
+.+.+..+.-.+..+...........++. .+.+.+|++... +|.+..+.=+--++..|+.|.++| |+||
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr 81 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGR 81 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH------HHHHHHHHHHHHHHhcchheeeeccccccccc
Confidence 34445555555555555555555555565 667788999988 888888888888999999999999 4786
Q ss_pred -chHHHHHHHHHHHHHHHHHhHH------HHHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHhhhhhhhhH
Q 017429 112 -KPVIIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIG 182 (371)
Q Consensus 112 -r~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g 182 (371)
|+.++.+.+..++...++-.++ +....++...+.+++...+.. -.++.+|+.+ +++|.+..+.-+.+..+|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g 161 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLG 161 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHH
Confidence 4556677788888887777655 334555667788887666555 4888888875 788999999999999998
Q ss_pred HhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhh
Q 017429 183 LIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESAS 261 (371)
Q Consensus 183 ~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (371)
..+...+.+.+....++.+. ..+|+....+.+++.++..+. ++-.+|...+....++..
T Consensus 162 ~~l~~~~~~plv~~~g~~~~---------~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~----------- 221 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDK---------ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV----------- 221 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcc---------hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc-----------
Confidence 87776666666553322111 335666556666665555443 445566554222111100
Q ss_pred hhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHH
Q 017429 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (371)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 341 (371)
+.+..+.....++|++++..++.+.+.........+...+|.+.. +|.+.......+.....+.+++.
T Consensus 222 ------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~- 289 (467)
T COG2211 222 ------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGL- 289 (467)
T ss_pred ------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHH-
Confidence 111122344678999999888877777777777777777777665 77777777777776666666655
Q ss_pred HHHHHHHHHhchhHHHHHHHHhhhhccc
Q 017429 342 SLYPFLERILGPIMVARIAGVNFEHSVA 369 (371)
Q Consensus 342 ~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 369 (371)
++.+++.+|+|+|++...+.++.+++.+
T Consensus 290 ~~~p~L~~~~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 290 ILWPRLVKKFGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HhHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 5889999999999999999888776543
No 122
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.61 E-value=1.8e-14 Score=132.62 Aligned_cols=135 Identities=21% Similarity=0.281 Sum_probs=114.2
Q ss_pred cccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHH
Q 017429 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (371)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (371)
..........|.+.++.|.+..+ .+...+...++..++.++.|+++||+|||+.+..+.+..+++.+.....++
T Consensus 234 ~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (406)
T PRK11551 234 IVLYFLLNWLPSLLVGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS 307 (406)
T ss_pred HHHHHHHHHHHHHHHhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33344455678888888999888 899999999999999999999999999999998877777777666666777
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 135 ~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.+.+.+..++.|++.+...+. .++..|.+|+++|++++++.+....+|..+||.++|.+.+
T Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 308 FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 777777778888876555554 8899999999999999999999999999999999999987
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.61 E-value=7.4e-15 Score=113.74 Aligned_cols=135 Identities=33% Similarity=0.577 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc
Q 017429 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~ 166 (371)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++.+.+.+.+++.|++.+...+. ..++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788899999999999999999999999999998888888889999999999999988877775 89999999999
Q ss_pred chhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHH-Hhhccc
Q 017429 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (371)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (371)
+|++..++.+....+|..++|.+++.+.+ ..+|+..+.+.++..++..+. .+..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQ----------------FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------------ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999987 555666666666555554443 344444
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.60 E-value=3.4e-14 Score=130.47 Aligned_cols=161 Identities=19% Similarity=0.167 Sum_probs=128.0
Q ss_pred cccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHH
Q 017429 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (371)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (371)
........+.+.++.|.+ + .++..+.+.++..++.++.|++.||+|||+.+..+.++.+++.++....++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T PRK05122 232 FGTIATFITLYYAARGWD--G------AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPW 303 (399)
T ss_pred HHHHHHHHHHHHHHcccc--c------chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 334445566555665652 3 55667788888899999999999999999999998888888888877788888
Q ss_pred HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccc
Q 017429 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (371)
Q Consensus 137 ~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~ 215 (371)
.+++..++.|++.+...+. .....|..|+++|+++.++++....+|..++|.+.|.+.+ .++|
T Consensus 304 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----------------~~g~ 367 (399)
T PRK05122 304 MALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS----------------WFGY 367 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HcCH
Confidence 8888899999988776665 7778899999999999999999999999999999999987 5566
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccccc
Q 017429 216 FLPCLCISLFAFGVTIAAFWLPETLH 241 (371)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (371)
+..+...+++.++.++..+.++++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 368 PSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccc
Confidence 77777777777766666566655443
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=1.7e-14 Score=131.02 Aligned_cols=156 Identities=13% Similarity=0.042 Sum_probs=121.9
Q ss_pred HHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH
Q 017429 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (371)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (371)
+.............+.+.++++.++.+ .+...+...++..++.++.|+++||+|||+.+.++.++.+++.++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 288 (377)
T TIGR00890 215 FLNAVSGLLLIGLYKPYGQSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAML 288 (377)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 333333333344556667888888877 88999999999999999999999999999999999888888887776
Q ss_pred hHHHH--HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCccccc
Q 017429 131 LSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (371)
Q Consensus 131 ~~~~~--~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~ 207 (371)
+.++. ..++...++.|++.+...+. ..++.|.+|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus 289 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~------------ 356 (377)
T TIGR00890 289 FIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT------------ 356 (377)
T ss_pred HcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 65532 33445667778877666654 8899999999999999999999999999999999999988
Q ss_pred ccccCccchhHHHHHHHHHHH
Q 017429 208 SLFGKFPYFLPCLCISLFAFG 228 (371)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~ 228 (371)
..+|+..+.+.+++.++
T Consensus 357 ----~~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 357 ----EIGFEYTFIVTGAFALT 373 (377)
T ss_pred ----hhchhhHHHHHHHHHHH
Confidence 55566666666555444
No 126
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.58 E-value=7.1e-14 Score=127.49 Aligned_cols=148 Identities=12% Similarity=0.064 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.++...+..++............|.+.++.|.++.+ .|+..++..++..++.++.+++.||+|+|+.+.++.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~ 278 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAI 278 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHH
Confidence 4445445555555566666677788777889999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhh-hhhhhHHhHHHhhhhhhcC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~i~~~l~~ 195 (371)
...+.....+++++.+.+++..++.|++.+...+. ..++.+. |+++|++..++++ ...++|..+||.++|.+.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888875 8899988 9999999999985 5778999999999999998
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.57 E-value=1.5e-14 Score=133.68 Aligned_cols=139 Identities=18% Similarity=0.141 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~ 162 (371)
.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.+++++++.+++.+++.|++.+...+. ..++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999988888888888889999999999999887766554 7899999
Q ss_pred ccccchhhhhHh-hhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccc
Q 017429 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPE 238 (371)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e 238 (371)
+|++.|++..+. ++....+|..++|.+.|++.+ .++|+..+...+++.++..+ ..+.+++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~----------------~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD----------------SIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH----------------hhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999887665 567788999999999999998 55666666776666555443 3444444
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=1.2e-13 Score=124.24 Aligned_cols=163 Identities=22% Similarity=0.314 Sum_probs=137.8
Q ss_pred HHhhcccccchhhHHHHHHhh-ccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCch-HHHHHHHHHHHHHHH
Q 017429 51 LCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVIFNTL 128 (371)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~ 128 (371)
+.............|.+.++. |.++.+ .++..+...++..++.++.|++.||+|||+ .+..+.++..++.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 258 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 333444455566667666654 888888 999999999999999999999999999999 999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCccccc
Q 017429 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (371)
Q Consensus 129 ~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~ 207 (371)
....++.+.+++..++.|++.+...+. ..++.|..|+++|++.+++.+....+|..++|.+.+.+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~------------ 326 (352)
T cd06174 259 LALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD------------ 326 (352)
T ss_pred HHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 888888889999999999998887775 9999999999999999999999999999999999999998
Q ss_pred ccccCccchhHHHHHHHHHHHHHHHHhh
Q 017429 208 SLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (371)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (371)
..+|+..+.+.+++.++..+..++
T Consensus 327 ----~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 327 ----TGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred ----ccCcchHHHHHHHHHHHHHHHhee
Confidence 556666667777776666555443
No 129
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=1.6e-13 Score=124.86 Aligned_cols=154 Identities=15% Similarity=0.293 Sum_probs=122.2
Q ss_pred hhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 017429 62 PFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVL 140 (371)
Q Consensus 62 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (371)
...|. +.+++|.++.+ .+++.+.......++.++.|++.||+|||+.+.++.++..+........++.+.+++
T Consensus 220 ~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (375)
T TIGR00899 220 INMPLLIIHELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLM 293 (375)
T ss_pred hhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34454 45678988888 888887777777888999999999999999998887776666666666778888888
Q ss_pred HHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHH
Q 017429 141 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPC 219 (371)
Q Consensus 141 ~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 219 (371)
.+++.|++.+...+. ..++.|..|+ +|++++++++....+|..++|.++|.+.+ .++|+..+
T Consensus 294 ~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~----------------~~g~~~~~ 356 (375)
T TIGR00899 294 LQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE----------------RWSYHAVY 356 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------hccchhHH
Confidence 888999887776665 7888898876 46799999999999999999999999988 55666667
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 017429 220 LCISLFAFGVTIAAFWLPE 238 (371)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e 238 (371)
...+++.++..+..++++|
T Consensus 357 ~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 357 WFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHheecC
Confidence 7777777766666665554
No 130
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.55 E-value=1.3e-13 Score=127.25 Aligned_cols=163 Identities=17% Similarity=0.119 Sum_probs=130.7
Q ss_pred chhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHH
Q 017429 60 LFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (371)
Q Consensus 60 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (371)
.....|.+.++ +|.+..+ .+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+..
T Consensus 242 ~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQ------IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILA 315 (417)
T ss_pred HHHhhHHHHHhccCCChhH------hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHH
Confidence 44566766666 8998888 9999999999999999999999999888888888888888888777777888777
Q ss_pred HHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchh
Q 017429 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (371)
Q Consensus 139 ~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~ 217 (371)
.+..++.|++.+...+. .+++.|..|++.|++++++++....+|..+||.+.|.+.+ .++++.
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~----------------~~g~~~ 379 (417)
T PRK10489 316 VLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA----------------MMTPVA 379 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH----------------Hhchhh
Confidence 78888889887777665 7899999999999999999999999999999999999998 445555
Q ss_pred HHHHHHHHHH-HHHHHHhhccccccCCC
Q 017429 218 PCLCISLFAF-GVTIAAFWLPETLHRHN 244 (371)
Q Consensus 218 ~~~~~~~~~~-~~~~~~~~~~e~~~~~~ 244 (371)
.+...+...+ +.++.....||.++..+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (417)
T PRK10489 380 SASASGFGLLIIGVLLLLVLGELRRFRQ 407 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccc
Confidence 5554444433 34555666677665433
No 131
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.54 E-value=5.9e-14 Score=130.80 Aligned_cols=148 Identities=17% Similarity=0.148 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc--CCchHHHH--
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM-- 117 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l~~-- 117 (371)
.++......++..........++|.+.+++|.+..+ .+++.++..++..++.++.|+++||. ++|+...+
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 315 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF 315 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH
Confidence 344444444555555555666778777888999888 99999999999999999999999984 33433333
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.+..+++.++....++++.+++.+++.|++.+...+. .+++.|.+|++++++.+++++....+|..+||.++|.+.+
T Consensus 316 ~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 316 ALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 33444455555666778888889999999998887775 8999999999999999999999999999999999999988
No 132
>PRK12382 putative transporter; Provisional
Probab=99.53 E-value=2.9e-13 Score=123.96 Aligned_cols=156 Identities=21% Similarity=0.212 Sum_probs=124.7
Q ss_pred cccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHH
Q 017429 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (371)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (371)
..........|.+.++.+.+ + .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKGWA--M------AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT 301 (392)
T ss_pred HHHhHHHHHHHHHHHhcCCc--h------hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc
Confidence 33344455666666666654 3 456667778888899999999999999999999998888888888777788
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCc
Q 017429 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (371)
Q Consensus 135 ~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~ 213 (371)
.+.+++..++.|++.+...+. ...+.|.+|+++|+++.++.+....+|..++|.+.+.+.+ ..
T Consensus 302 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~----------------~~ 365 (392)
T PRK12382 302 AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT----------------SF 365 (392)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hh
Confidence 888888889999988777665 7888999999999999999999999999999999999998 55
Q ss_pred cchhHHHHHHHHHHHHHHHHh
Q 017429 214 PYFLPCLCISLFAFGVTIAAF 234 (371)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (371)
+|+..+.+.+++.++..+..+
T Consensus 366 g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 366 GYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred CchHHHHHHHHHHHHHHHHHH
Confidence 666666777766666555443
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=2e-13 Score=125.66 Aligned_cols=159 Identities=18% Similarity=0.232 Sum_probs=124.3
Q ss_pred ccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHH
Q 017429 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (371)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (371)
....+..+.+.++.+.+..+ .....+.+.++..++..++.+..|+++||+|||+.+..+.++..++.+...+.++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSN--IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQ 313 (408)
T ss_pred HHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHH
Confidence 34455666665554333222 1112456666777888899999999999999999999998888887777777788888
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccch
Q 017429 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (371)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~ 216 (371)
+++.+++.|++.+...+. .+.+.+..|+++|++.+++.+....+|..+||.++|.+.+ .++|+
T Consensus 314 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~----------------~~g~~ 377 (408)
T PRK09874 314 LGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA----------------NYGFR 377 (408)
T ss_pred HHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh----------------hcchh
Confidence 888999999998887775 8888899999999999999999999999999999999988 55677
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 017429 217 LPCLCISLFAFGVTIAAF 234 (371)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~ 234 (371)
..+++.+++.++..+..+
T Consensus 378 ~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 378 AVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777777666555443
No 134
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.53 E-value=7e-13 Score=121.39 Aligned_cols=178 Identities=12% Similarity=0.075 Sum_probs=126.3
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 122 (371)
.+.+.+..++............|.+.+++|.+..+ .+...+.+.++..++.++.|++.||+|||+.+..+..+.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 33333444444445555667778777788999888 999999999999999999999999999999998887777
Q ss_pred HHHHHHHHh-HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-ccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 123 VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 123 ~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
.++..+... .++...+ .-++.|++.+...+. .....+..+ +++|++..++.+....++..++|.+.|++.+..
T Consensus 281 ~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~-- 356 (393)
T PRK09705 281 LVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS-- 356 (393)
T ss_pred HHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 776655443 2222222 224567776666564 556667764 678999999999999999999999999999831
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccccCC
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRH 243 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~ 243 (371)
.+|...+++.+++.++..+ ...+.||++.++
T Consensus 357 -------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 357 -------------GNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 1245555665555555443 456677776543
No 135
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.53 E-value=3.2e-13 Score=124.06 Aligned_cols=171 Identities=15% Similarity=0.234 Sum_probs=124.4
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH-HHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~ 121 (371)
++...+..++............|.+.+++|.+..+ .+.+.+...++..++.++.|+++||+|||+.+. .+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~ 297 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSE------WLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVG 297 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 34334444444444555566788888889999888 888888999999999999999999999988764 33333
Q ss_pred HHHHHHHHHh-----HHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 122 VVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 122 ~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
.++..+.... .++.+.+++..++.|++.+...+....+.|..| ++|++++|+.+....+|..++|.+++.+.+
T Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~- 375 (402)
T TIGR00897 298 CGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIG- 375 (402)
T ss_pred HHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3333333222 235666777788888876665555566677654 589999999999999999999999999998
Q ss_pred CCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc
Q 017429 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (371)
Q Consensus 197 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (371)
.++++..+++.+++.++..+...++
T Consensus 376 ---------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 376 ---------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ---------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 5666777777777766665554444
No 136
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.53 E-value=1.7e-12 Score=116.37 Aligned_cols=176 Identities=17% Similarity=0.214 Sum_probs=141.5
Q ss_pred hHHHHHHHHHHHhhcccccchhhHH-HHHHhhc----cccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-CCchH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQ----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPV 114 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~ 114 (371)
|.++.++..-+..-++++.....+- ++..+++ .++++ ..-+.++|..-.-+..+++|+++||+ |+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 4566677778888888777766554 5666666 87777 55566666555557889999999996 99999
Q ss_pred HHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc--chhhhhHhhhhhhhhHHhHHHhh
Q 017429 115 IIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPAL 189 (371)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~i 189 (371)
++.|.++..++.++.+.+. +...++++-.+.++|.|.+-+. ..++.|++|++ +|-.++++++.+.++|+.++|.+
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999999999874 7788889988899999999884 99999999854 37778899999999999999999
Q ss_pred hhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccc
Q 017429 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (371)
Q Consensus 190 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (371)
.+++.+ +++|...|...++-..+.++.....+.
T Consensus 175 ~~~~~~----------------~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 175 TGLLAI----------------NYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHH----------------hhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 999998 777777777777766666666555543
No 137
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.52 E-value=4.6e-13 Score=122.18 Aligned_cols=154 Identities=19% Similarity=0.262 Sum_probs=117.1
Q ss_pred ccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHH
Q 017429 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (371)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (371)
.....++|.+.++.|.+..+ .++..+...++..+++++.|++.||+|+|+++..+.....++.+... . ...
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~ 287 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAA 287 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHH
Confidence 33445678787888888888 89989999999999999999999999999999888777777655443 2 223
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccch
Q 017429 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (371)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~ 216 (371)
.....++.|++.+...|. .+.+.|..|+++++...+..+.+.++|..+||.++|.+.+ .++++
T Consensus 288 ~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~----------------~~g~~ 351 (381)
T PRK03633 288 MAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ----------------NYSDN 351 (381)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhCcc
Confidence 345667777765555564 8888999998888888888888899999999999999998 44556
Q ss_pred hHHHHHHHHHHHHHHHHhhc
Q 017429 217 LPCLCISLFAFGVTIAAFWL 236 (371)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~ 236 (371)
..+.+.+.+.++..+..++.
T Consensus 352 ~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 352 LLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 66666666665554444433
No 138
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.52 E-value=1.7e-12 Score=114.20 Aligned_cols=261 Identities=16% Similarity=0.083 Sum_probs=170.5
Q ss_pred HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC-----CchHHHH-HHHHHHHHHHHHHhH-----H-
Q 017429 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIM-GTASVVIFNTLFGLS-----V- 133 (371)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~- 133 (371)
.+..|++++..- .+...+...+.. ...+.+|+.+|+.+ ||..+++ |.+..+.+..+.+++ .
T Consensus 5 VMIvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~ 77 (403)
T PF03209_consen 5 VMIVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAES 77 (403)
T ss_pred hHHHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccc
Confidence 355678888776 787777777664 56899999999998 8866655 566655555544432 2
Q ss_pred -------H-HH--HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCC
Q 017429 134 -------N-FW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (371)
Q Consensus 134 -------~-~~--~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~ 202 (371)
. .+ ...+...+.|+|.+...+. .++++|..|+|+|+++.++.....-+|.+++..+.+.+.+..
T Consensus 78 ~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~----- 152 (403)
T PF03209_consen 78 GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF----- 152 (403)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc-----
Confidence 1 12 2334456678877776665 999999999999999999999999999999999999998831
Q ss_pred cccccccccCccchhHHHHHHHH--HHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCcccccccc
Q 017429 203 LFSSESLFGKFPYFLPCLCISLF--AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (371)
Q Consensus 203 ~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (371)
..-+..-.+..+. .+...+...+-.|.+.....+.++++ +......++++..
T Consensus 153 ----------s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~ 206 (403)
T PF03209_consen 153 ----------SPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWA 206 (403)
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHh
Confidence 1112222222222 22222223333343332222110000 1112234566677
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHH
Q 017429 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (371)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~ 360 (371)
+|+..+..+..++.......-...+-.|.-+. +|++..+...+....+.+..++....+..+.+|.++++....|
T Consensus 207 ~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~V-----fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G 281 (403)
T PF03209_consen 207 SPQARRFFVFLFLGTLAFFMQDVILEPYGGEV-----FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALG 281 (403)
T ss_pred CCChhHHHHHHHHHHHHHHhhHHHcCCchhHH-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 78777766666665555555554544454444 9999999999999999999888866666666688888888888
Q ss_pred HHhhhhccc
Q 017429 361 GVNFEHSVA 369 (371)
Q Consensus 361 ~~~~~~~~~ 369 (371)
+...+++..
T Consensus 282 ~~~~~~~f~ 290 (403)
T PF03209_consen 282 CLLGALAFA 290 (403)
T ss_pred HHHHHHHHH
Confidence 877766654
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.52 E-value=4.7e-13 Score=122.34 Aligned_cols=169 Identities=12% Similarity=0.073 Sum_probs=114.7
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchH--HHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV--IIM 117 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~--l~~ 117 (371)
+.++...+..++............|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+. ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 3444455555555666666667777554 567888888 8999999999999999999999999999861 111
Q ss_pred ------HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 118 ------GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 118 ------~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
+.++..+........++.+..+....+.+++.+ ..+ ..+++.|.+|+++|+++.++.+....+|..++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 111111111111122344444444444444555 455 499999999999999999999999999999999999
Q ss_pred hhhcCcCCCCCCcccccccccCcc-chhHHHHHHHHHHHHHHH
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFP-YFLPCLCISLFAFGVTIA 232 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (371)
+.+.+ ..+ |...+.+.++..++..+.
T Consensus 368 g~l~~----------------~~g~~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 368 GAIAA----------------TTGSFAGALMVVAALALIGALS 394 (399)
T ss_pred hhhcc----------------CCCchhHHHHHHHHHHHHHHHH
Confidence 99988 333 555556665555554443
No 140
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.51 E-value=5.2e-12 Score=116.97 Aligned_cols=258 Identities=17% Similarity=0.134 Sum_probs=175.6
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH-HHHHHHHHHHHHHhH-HH-HHHHHHHHHHHhhhccchhHH-H
Q 017429 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIFNTLFGLS-VN-FWMAVLTRFLLGSLNGLLGPI-K 156 (371)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~-~~-~~~~~~~r~l~G~~~~~~~~~-~ 156 (371)
+.+.++..++..+..++..|+.|.++|+-|+||.++. ..++..+.+.++.+. ++ ++...+..++.-++.+...+. .
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446788889999999999999999999987666554 455555566655553 33 333333334444565555665 9
Q ss_pred HHHhhhccccch--------------------------hhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccc
Q 017429 157 AYACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (371)
Q Consensus 157 ~~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~ 210 (371)
+++.|+.+++.+ ++..+.-.....+|+++.-.+.-.+....++. .=
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~--------~~ 220 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST--------AS 220 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--------cc
Confidence 999999998888 88888877777788877666655554322111 00
Q ss_pred cCccchhHHHHHHHHHHHH-HHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHH
Q 017429 211 GKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 289 (371)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
..++.|..+.+.++..++. +...+++||.++....++... ..... -++..+..++..+.|.....++
T Consensus 221 ~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~-~~~~g-----------~~~l~~t~k~~~~~~~~~~fLi 288 (477)
T PF11700_consen 221 NTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS-YLRFG-----------FKRLWRTFKEIRKLRQLFLFLI 288 (477)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh-HHHHH-----------HHHHHHHHHHHHhChHHHHHHH
Confidence 0234566666666665544 445677888775322111110 00000 0011234556677888889999
Q ss_pred HHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchh--HHHHHHHHhh
Q 017429 290 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVNF 364 (371)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~--~~~~~~~~~~ 364 (371)
.++++.-...+...+...|.... +|++..+...+.....+.+++++ ++.+++.||+|.| +.+..+.++.
T Consensus 289 a~~l~~dg~~ti~~~~~i~a~~~-----lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 289 AYFLYSDGVNTIISFAGIYATEV-----LGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----cCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHH
Confidence 99998888888888888888877 89999999999999999999999 4889999999999 7776666554
No 141
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.51 E-value=7e-13 Score=125.34 Aligned_cols=130 Identities=20% Similarity=0.246 Sum_probs=102.6
Q ss_pred chhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH--HHHH
Q 017429 60 LFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFW 136 (371)
Q Consensus 60 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~ 136 (371)
....+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+.++..+..++.... .+.+
T Consensus 294 ~~~~lp~~l~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVW 367 (496)
T ss_pred HHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 456678776 588999988 9999999999999999999999999999999888877666655443332 3334
Q ss_pred HHHHHHHHHhh-hccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 137 MAVLTRFLLGS-LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 137 ~~~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.+.+..++.+. +.+.......++.|.+|+++|++++++.+....+|..+||.++|.+.+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 368 VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 44444455444 344333347889999999999999999999999999999999999998
No 142
>PRK03545 putative arabinose transporter; Provisional
Probab=99.51 E-value=9e-13 Score=120.65 Aligned_cols=149 Identities=13% Similarity=0.146 Sum_probs=113.7
Q ss_pred hhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHH-HHHHhHHHHHHHH
Q 017429 62 PFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWMAV 139 (371)
Q Consensus 62 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 139 (371)
...+ .+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+... +..+..++. .+....++.+.++
T Consensus 226 ~~~~~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~ 298 (390)
T PRK03545 226 SYIEPFVQQVAGLSENF------ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLS 298 (390)
T ss_pred HHHHHHHHHhcCCCccH------HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHH
Confidence 3444 445557888888 899999999999999999999999999887544 434333333 3334566777788
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhH
Q 017429 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (371)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 218 (371)
+..++.|++.+...+. ...+.|..| ++|++++++++....+|..+||.++|.+.+ .++++..
T Consensus 299 ~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~----------------~~g~~~~ 361 (390)
T PRK03545 299 VLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL----------------HLGLSSI 361 (390)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------ccChhHH
Confidence 8888889887666554 777778766 588999999999999999999999999998 6667777
Q ss_pred HHHHHHHHHHHHHHHh
Q 017429 219 CLCISLFAFGVTIAAF 234 (371)
Q Consensus 219 ~~~~~~~~~~~~~~~~ 234 (371)
+...+++.+++++...
T Consensus 362 ~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 362 GYVGAALALAALVWSI 377 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777766555433
No 143
>PRK03699 putative transporter; Provisional
Probab=99.50 E-value=5.4e-13 Score=122.22 Aligned_cols=174 Identities=11% Similarity=0.089 Sum_probs=127.6
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
++...+..++............|.+. +++|.+..+ .+.+.+.+.++..++.++.|+++||+|||+.+.....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~ 280 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED------AGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGL 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH------hhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Confidence 34444444444444455567778666 567999888 99999999999999999999999999999999888777
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
.++...+....++...+.+..++.|++.+...+. .++..|..|. ++++..+....+..+|..++|.+.|.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~----- 354 (394)
T PRK03699 281 ALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVA----- 354 (394)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHH-----
Confidence 7776666666667766667777888876655554 6677777654 46777888888889999999999999998
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHHHHHhhcccc
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (371)
..+++..++..+++.++..+.....++.
T Consensus 355 -----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (394)
T PRK03699 355 -----------HFGLQAALLTANGLYAVVFVMCILLGFV 382 (394)
T ss_pred -----------HhCchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4445555565555555554444444443
No 144
>PRK09952 shikimate transporter; Provisional
Probab=99.49 E-value=9e-13 Score=122.35 Aligned_cols=166 Identities=15% Similarity=0.156 Sum_probs=114.8
Q ss_pred hcccccchhhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHh-
Q 017429 54 ALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL- 131 (371)
Q Consensus 54 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~- 131 (371)
....+......|.+ .+++|.+... ...+.....+...++.++.|+++||+|||+.+..+.++..++.+....
T Consensus 263 ~~~~~~~~~~~~~y~~~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 336 (438)
T PRK09952 263 LLTMYIVTAFALNYSTQNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMA 336 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 33344445566644 4567877665 555555666677888999999999999999998887766554433322
Q ss_pred --H-HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhh-hhhhhHHhHHHhhhhhhcCcCCCCCCcccc
Q 017429 132 --S-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (371)
Q Consensus 132 --~-~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~ 206 (371)
. ++.+.+++..++.+++.+...+. +++++|.+|++.|+.+.++.+ .+..+|+.++|.+.+++.+..
T Consensus 337 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~--------- 407 (438)
T PRK09952 337 LEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF--------- 407 (438)
T ss_pred HHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 1 23344444556667776666554 899999999999999888854 445589999999999998721
Q ss_pred cccccCccchhHHHHHHHHHHHHHHHHhhcccc
Q 017429 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (371)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (371)
..+|..++.+.+++.++..+..+.++|+
T Consensus 408 -----~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 408 -----GGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 1235666677777777776666667764
No 145
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.48 E-value=1.4e-12 Score=122.33 Aligned_cols=174 Identities=17% Similarity=0.151 Sum_probs=123.3
Q ss_pred HHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
...+..+.............|.+.+++|.+..+ .++......++..++.++.|+++||+|||+.+.++.++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 361 (481)
T TIGR00879 288 GVVLQWFQQFTGINAIMYYSPTIFENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAI 361 (481)
T ss_pred HHHHHHHHHHhCCeehHHHHHHHHHHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 334444444444555566778888899998877 88888889999999999999999999999999998888777
Q ss_pred HHHHHHhH-----H------HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhh
Q 017429 125 FNTLFGLS-----V------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (371)
Q Consensus 125 ~~~~~~~~-----~------~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~ 192 (371)
+.++..+. + +...+....++.+.......+. ..++.|.+|+++|++++++.+....+|.+++|.+.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 362 CLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666521 1 2222333333333322223344 7788999999999999999999999999999999999
Q ss_pred hcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHH-HHhhccccc
Q 017429 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETL 240 (371)
Q Consensus 193 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~ 240 (371)
+.+ ..+|...+++.++++++..+ ..++.||++
T Consensus 442 ~~~----------------~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 442 MLE----------------SIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHH----------------hcCccceehhHHHHHHHHHHHHheecccCC
Confidence 887 33344444555555555444 345566654
No 146
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.46 E-value=4e-13 Score=122.85 Aligned_cols=147 Identities=20% Similarity=0.215 Sum_probs=109.6
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
++......++............|.+. +++|.+..+ .+.......++..++.++.|+++||+|||+.+.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 294 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 34444444444445555566777665 678888888 88889999999999999999999999999988765544
Q ss_pred HHHHH--HHHHh--HHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhh-hhhhhhHHhHHHhhhhhhcC
Q 017429 122 VVIFN--TLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 122 ~~~~~--~~~~~--~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~i~~~l~~ 195 (371)
..+.. ..... .++.+.++...++.|++.+...+ ..+++.|.+|+++|+++.++. +.+..+|..++|.++|.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 43332 12222 24566666777888887766656 499999999999999999984 56667889999999999988
No 147
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.46 E-value=1.9e-12 Score=121.32 Aligned_cols=182 Identities=16% Similarity=0.172 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
.++...+..++............|.+. +++|.+..+ .++..+...++..++.+++|+++||+|||+.+.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 344455555555555455667778554 678999988 8999999999999999999999999999988766544
Q ss_pred HHHHHHHH--HHhHHHHHHHHHHHHHHhhh-ccchhHHHHHHhhhccccchhhhhHhhhhhhhh-HHhHHHhhhhhhcCc
Q 017429 121 SVVIFNTL--FGLSVNFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQP 196 (371)
Q Consensus 121 ~~~~~~~~--~~~~~~~~~~~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~i~~~l~~~ 196 (371)
+..++... ....++.....+.+++.|++ .+..........|.+|++.|+++.|+.+....+ |..++|.+.|.+.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~ 412 (467)
T PRK09556 333 LALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADP 412 (467)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcc
Confidence 44333222 22334566666777888864 333333356777999999999999999888886 779999999999882
Q ss_pred C-CCCCCcccccccccCccchhHHHHHHHHHHHHHHHHh
Q 017429 197 A-EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (371)
Q Consensus 197 ~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (371)
. +++.. .+ ....+|+..+.+..++.++..+..+
T Consensus 413 ~~~g~~~-~~----~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 413 TKNGTPI-FG----YTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred ccccccc-cc----ccccChHHHHHHHHHHHHHHHHHHH
Confidence 1 11100 00 0023456666666555555544444
No 148
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.45 E-value=1.5e-12 Score=123.01 Aligned_cols=182 Identities=15% Similarity=0.072 Sum_probs=110.4
Q ss_pred cccccchhhHHHHHHhhccccccccch----hh-hHH-HHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 017429 55 LPISSLFPFLYFMIKDFQIAKREEDIG----SY-AGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (371)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~-~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (371)
+..+......|.+.++.|.+..+.... .. ... ...+..++.+++.++.++++||+|||+.++++..+.+++..+
T Consensus 302 ~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~ 381 (502)
T TIGR00887 302 IAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFV 381 (502)
T ss_pred HHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHH
Confidence 333344555787778888765431000 00 011 233345566778899999999999999998888777776655
Q ss_pred HHhHHH----HHHHHHHHHHHhh-hccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCc
Q 017429 129 FGLSVN----FWMAVLTRFLLGS-LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (371)
Q Consensus 129 ~~~~~~----~~~~~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~ 203 (371)
.+...+ ...+...-+...+ +.+.....+.+.+|.+|++.|+++.++.+....+|.+++|.+.+.+.+..+..
T Consensus 382 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 458 (502)
T TIGR00887 382 LGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPT--- 458 (502)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccc---
Confidence 554321 1111111111122 22233334778899999999999999999999999999999999988721100
Q ss_pred ccccccccCccchhHHHHHHHHHHHHHHHHhhccccccC
Q 017429 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (371)
Q Consensus 204 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (371)
.|+.. ..++...+.+.++..++..+..+++||++++
T Consensus 459 ~~~~~---~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 459 KGYPT---GIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred ccccc---cccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 00000 1223344455555555555556778997754
No 149
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.45 E-value=4e-12 Score=116.04 Aligned_cols=146 Identities=15% Similarity=0.129 Sum_probs=117.7
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 122 (371)
++...+..++............|.+.++.|.+..+ .|...+...++..+..++.|++.||+|+|+.+..+.++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 33333334444444444556667677888998888 899999888999999999999999999999999999998
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhh-hhhhhHHhHHHhhhhhhcC
Q 017429 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~i~~~l~~ 195 (371)
++..+..+..++++.+++..++.|++.+...+. ..++.+. +++++++..+..+ ....+|..+||.++|.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 281 VVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888899999999999999988877775 7777776 5666788888875 5567888999999999998
No 150
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.44 E-value=5.4e-12 Score=115.09 Aligned_cols=174 Identities=18% Similarity=0.229 Sum_probs=125.7
Q ss_pred HHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 017429 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (371)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (371)
......-+.+....+...+.++-|++..+ ..+.+....+...+..+++..+.||+|||+.++.+..+..+..++
T Consensus 278 ~~~qq~sGi~ai~~Yst~i~~~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 278 SFAQQFSGINAIFFYSTSIFKTAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHhcCcceeHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 33344445566667777889999999988 889999999999999999999999999999999999988888777
Q ss_pred HHhHH---H-H--H---HHHHHHHHHhhhccc-hhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 129 FGLSV---N-F--W---MAVLTRFLLGSLNGL-LGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 129 ~~~~~---~-~--~---~~~~~r~l~G~~~~~-~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
+.... + . | ..+++.++..+..+. ..| .+-+.+|++|++.|..++++......+...+-...-..+.+
T Consensus 352 ~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~-- 429 (485)
T KOG0569|consen 352 MSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN-- 429 (485)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 65421 1 1 1 123334444443222 344 49999999999999999999888888888776666666665
Q ss_pred CCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCC
Q 017429 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (371)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (371)
.+|-...+.+.+.+.+..+..++.+|||+.+..
T Consensus 430 --------------~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 430 --------------VIGPYVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred --------------HhcchhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 222222234445555556778899999986543
No 151
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.43 E-value=3.5e-12 Score=118.16 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=98.7
Q ss_pred chhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017429 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (371)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (371)
....+|.+.++.|.+..+ .+...+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....
T Consensus 250 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGV------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLL 323 (426)
T ss_pred HHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 445677777778888777 88888999999999999999999999999999988877766655444322211122
Q ss_pred HHHHHHhh--hccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 140 LTRFLLGS--LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 140 ~~r~l~G~--~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.-++.|+ +.....+ .+.++.|.+|+++|++++|+......+|+.++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 22233333 2223333 47788999999999999999999999999999999999988
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=9.1e-12 Score=110.31 Aligned_cols=174 Identities=14% Similarity=0.142 Sum_probs=133.2
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhH-HHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
+++.++...+.+++...+.....+++ |.+.+..|.+.+. ++++..++.++..+|+++.|+++|| +.|+.+..
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~------vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~ 281 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA------VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIA 281 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH------HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHH
Confidence 34455556666666666666556655 6677778999999 9999999999999999999999999 98999888
Q ss_pred HHHHHHHHHHHHHh-HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 118 GTASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 118 ~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
...+.++..+...+ .++.+..++.-++.|+..+..... ...+++ ..++.+..+.+++...+++|..+|..++|.+.+
T Consensus 282 ~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~ 360 (394)
T COG2814 282 ALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD 360 (394)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777766665555 455666666666677765554443 556666 446789999999999999999999999999999
Q ss_pred cCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc
Q 017429 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (371)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (371)
++++....++.++..++.++..+..
T Consensus 361 ----------------~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 361 ----------------ALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred ----------------hhchHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777788888777766655443
No 153
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.42 E-value=5.8e-12 Score=116.88 Aligned_cols=168 Identities=13% Similarity=0.032 Sum_probs=109.5
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc--CCchHH-HHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-IMG 118 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~ 118 (371)
++.+.+..++............|.+. +++|.+..+ .+...+.+.++..++.++.|+++||+ ++|+.. ...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT------ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 33344444444444445556777666 668999888 89999999999999999999999999 333332 222
Q ss_pred HHH---HHHHHHHHHhHHHHHHHHHHHHHHhhhccchh-HHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 119 TAS---VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLG-PIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 119 ~~~---~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.+. ..+...... ..+.....+..+..|++..... .......|.+|+++|++++|+.+....+|..++|.+.|.+.
T Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~ 397 (434)
T PRK11663 319 AAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVL 397 (434)
T ss_pred HHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHH
Confidence 111 111111111 2233333344444454322222 23566789999999999999999999999999999999999
Q ss_pred CcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHH
Q 017429 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (371)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (371)
+ .++|...++..+++.++..+..
T Consensus 398 ~----------------~~g~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 398 E----------------IWHWTGFFVVISIAAGISALLL 420 (434)
T ss_pred H----------------hcccHHHHHHHHHHHHHHHHHH
Confidence 8 5556666677766666554433
No 154
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=3.5e-12 Score=118.97 Aligned_cols=171 Identities=14% Similarity=0.080 Sum_probs=109.7
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc--CCchHHH-HH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVII-MG 118 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l~-~~ 118 (371)
++...+..++..........++|.+.++ .|.+..+ .++....+.++..++.++.|+++||+ |||+... ..
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 4444444444444445556778876654 7888877 88888888999999999999999999 5554332 22
Q ss_pred HHHHHHHHHHHHh--HHHHHHHHHHHHHHhhhc-cchhHHHHHHhhhccccchhhhhHhhhhhhhhHHh-HHHhhhhhhc
Q 017429 119 TASVVIFNTLFGL--SVNFWMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLA 194 (371)
Q Consensus 119 ~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~i~~~l~ 194 (371)
..+..++.+.... ..+.+..++..++.|.+. +.......+..|.+|++.|+++.|+.+....+|+. .+|.+.|.+.
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 2223333322222 223444444444455432 22222355678999999999999999887778765 4899999999
Q ss_pred CcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhh
Q 017429 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (371)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (371)
+ ..+|+..+.+.+..+++.++....
T Consensus 409 ~----------------~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 409 D----------------FFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred H----------------HhcchHHHHHHHHHHHHHHHHHHH
Confidence 8 445666666666666655554443
No 155
>TIGR00895 2A0115 benzoate transport.
Probab=99.42 E-value=1.9e-12 Score=118.61 Aligned_cols=142 Identities=20% Similarity=0.264 Sum_probs=111.4
Q ss_pred HHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 125 (371)
.+...++............|.+.+++|.+..+ .++..+...++..++.++.|+++||+|||+.+....+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 255 LWLLYFMLLVGVYFLTNWLPKLMVELGFSLSL------AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 33444444444455566778888889999888 899999999999999999999999999995554444443333
Q ss_pred HHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 126 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
.++....++.+.+++..++.|++.+...+. .+++.|.+|+++|++++++......+|..+||.++|.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 329 VLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 333333566777778888899987777775 99999999999999999999999999999999999876
No 156
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.40 E-value=8.1e-11 Score=103.50 Aligned_cols=267 Identities=12% Similarity=0.008 Sum_probs=173.5
Q ss_pred chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH-HHHHHHHHHHHHHHhHHH--H-HHHHHHHHHHhhhccchhHH
Q 017429 80 IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTASVVIFNTLFGLSVN--F-WMAVLTRFLLGSLNGLLGPI 155 (371)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~--~-~~~~~~r~l~G~~~~~~~~~ 155 (371)
.+.+.+...++..+...+.+|+.|.++|+.|+||..+ ....+..++.+...+.++ + +..++...+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 4455888899999999999999999999999665554 445555555566665543 4 44445556677776666665
Q ss_pred -HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh--hhhcCcCCCCCCc-ccccccccCccchhHHHHHHHHHHHHHH
Q 017429 156 -KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQPAEKYPNL-FSSESLFGKFPYFLPCLCISLFAFGVTI 231 (371)
Q Consensus 156 -~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~--~~l~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (371)
.+++.+..++++-++..++-.....+|+.+.-++. ........+++.. ++-...- ...-|..+.+.++..++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHHh
Confidence 99999999998878777766556666665443332 2222211111100 1100001 33355556666666555444
Q ss_pred -HHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhc
Q 017429 232 -AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWAN 310 (371)
Q Consensus 232 -~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (371)
.++..|+.++.. ........+. -++.....++..+++.+...++..+++.=...+...+-..|..
T Consensus 215 Pm~~~v~~~~~~~---~~~~~~l~~g-----------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~ 280 (438)
T COG2270 215 PMILNVHDAEKIS---SPPPTALRNG-----------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA 280 (438)
T ss_pred HHHhccccccccc---ccchHHHHHH-----------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 444555544321 0110111000 1112235667777888888888888888777777777777877
Q ss_pred CCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhc
Q 017429 311 SPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHS 367 (371)
Q Consensus 311 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~ 367 (371)
.. +|++..+...+....++.++++++ +.+++++|+|.|+++..+++++.+.
T Consensus 281 ~~-----~gls~~~lll~g~~~~vvA~lg~i-i~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 281 AD-----LGLSSTELLLIGIALSVVAALGAI-IAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred HH-----cCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCceeehHHHHHHHHH
Confidence 55 899999999999999999999994 8899999999999888888776543
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.38 E-value=1.7e-11 Score=113.54 Aligned_cols=180 Identities=13% Similarity=0.174 Sum_probs=139.1
Q ss_pred hHHHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCc--hHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIM 117 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~l~~ 117 (371)
+.+....++.++..-+...+..... +..+++|++..+ ...+..+..+..++|++++|++.||+|.| +++++
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~ 354 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLI 354 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 3344444444444444444444444 444589999999 88888889999999999999999999999 89888
Q ss_pred HHHHHHHHHHHHHh--------HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHh
Q 017429 118 GTASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (371)
Q Consensus 118 ~~~~~~~~~~~~~~--------~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (371)
+.+++.+..+...+ .++.+.+++.-++.|+..|...+. .++.+|+.|+++.+..+|++....-....+||+
T Consensus 355 ~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 355 SLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 88877655555444 567888999999999998888886 999999999999999999999999999999999
Q ss_pred hhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcccccc
Q 017429 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (371)
Q Consensus 189 i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (371)
+.+.+.+..+ +.|..+....++.++.+++.+++++++.
T Consensus 435 l~g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 435 LFGLITDATG---------------SQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 9999998432 2455556666666666666676665443
No 158
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=1e-11 Score=116.59 Aligned_cols=147 Identities=16% Similarity=0.179 Sum_probs=113.8
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHH-hhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
+.......++............|.+.+ .+|.++.+ .++......++..++.++.|++.||+|||+++..+.++
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~ 336 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLG 336 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 333444444444444455556676665 47888877 88888888888888899999999999999999998887
Q ss_pred HHHHHHHHHhH---HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 122 VVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 122 ~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.++...+..+. ++.+.+.+..++.|++.+...+. ..+..+..|+++|+.+.++.+....+|..+|+.++|.+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 337 LALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776655543 33444455567778877776654 8888899999999999999999999999999999999877
No 159
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.37 E-value=4e-12 Score=116.78 Aligned_cols=129 Identities=18% Similarity=0.257 Sum_probs=103.0
Q ss_pred hhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHH-HHHhHHHHHHH
Q 017429 61 FPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LFGLSVNFWMA 138 (371)
Q Consensus 61 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~ 138 (371)
....| .+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+..+.++..+... .....++.+.+
T Consensus 258 ~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHT------VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVL 331 (405)
T ss_pred hhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHH
Confidence 34455 445678999888 99999999999999999999999999999999888776533332 33334556666
Q ss_pred HHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 139 ~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.+..++.|++.+...+ ...++.|.+|+++|++++|+.+....+|..++|.++|.+.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 332 GLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666777765444444 58899999999999999999999999999999999999998
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.37 E-value=3.7e-12 Score=115.22 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=113.2
Q ss_pred hhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHH-HHHHH
Q 017429 62 PFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN-FWMAV 139 (371)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~ 139 (371)
...|.+.++ +|.+..+ .+++.+...++..++.++.+++.||+|||+.+..+.++.+++.....+.++ .+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTH------YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 566777665 7888888 999999999999999999999999999999999888877777777777664 78888
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+..++.|++.+...+. .+++.|..|+++|++..++.+....+|..++|.++|.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998887775 8999999999999999999999999999999999999987
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.37 E-value=2.3e-11 Score=113.91 Aligned_cols=156 Identities=17% Similarity=0.220 Sum_probs=130.5
Q ss_pred hcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH
Q 017429 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (371)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (371)
.+....+...+|.+. +++|.+... .|++.+++.+|.++++++.+++.+|+++++.+..+.++.+++.+..++.
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~------yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASG------YGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc
Confidence 333344456677665 568888888 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCccccccccc
Q 017429 133 VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (371)
Q Consensus 133 ~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~ 211 (371)
++.+..++..++.|++.....+. .+.+.+..|++.||++++++++....+..+|..+.|.+.+
T Consensus 305 ~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~---------------- 368 (524)
T PF05977_consen 305 PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD---------------- 368 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 99999999999999987776664 8889999999999999999999999999999999999998
Q ss_pred CccchhHHHHHHHHHHHHHH
Q 017429 212 KFPYFLPCLCISLFAFGVTI 231 (371)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~ 231 (371)
.++.+..+.+.++..++..+
T Consensus 369 ~~g~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 369 HFGVRTALLIAGAALLLSAL 388 (524)
T ss_pred HhCHHHHHHHHHHHHHHHHH
Confidence 55555555655554444433
No 162
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.35 E-value=3.2e-11 Score=113.59 Aligned_cols=170 Identities=16% Similarity=0.135 Sum_probs=114.7
Q ss_pred ccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHH--
Q 017429 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-- 133 (371)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-- 133 (371)
.......+.|.+.++.|.+... ..+......++..++.++.|+++||+|||++++.+.++.+++.++++...
T Consensus 286 ~~~~~~~~~p~i~~~~g~~~~~------~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~ 359 (479)
T PRK10077 286 GINVVLYYAPEIFKTLGASTDI------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT 359 (479)
T ss_pred ChhHHHHHHHHHHHHcCCCCch------HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc
Confidence 3334445668888888988776 66777777888899999999999999999999999998888877765432
Q ss_pred HH-H-HHHHHHHHHhhhccc-hhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCccccccc
Q 017429 134 NF-W-MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 209 (371)
Q Consensus 134 ~~-~-~~~~~r~l~G~~~~~-~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~ 209 (371)
+. . ......++.+++.+. ..+. ..+++|.+|+++|++++++.+....+|..+++.+.+.+.+.. +.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~----------~~ 429 (479)
T PRK10077 360 QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNS----------WL 429 (479)
T ss_pred CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc----------ch
Confidence 11 1 222233334443332 3354 899999999999999999999999999988877766554210 00
Q ss_pred ccCccchhHHHHHHHHHHHHHH-HHhhcccccc
Q 017429 210 FGKFPYFLPCLCISLFAFGVTI-AAFWLPETLH 241 (371)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~ 241 (371)
.+.++|+..+++.++..++..+ .+++.||+++
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 430 VAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred hhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 0133444445555554444433 4456677653
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.35 E-value=1.6e-11 Score=112.71 Aligned_cols=132 Identities=16% Similarity=0.094 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~ 162 (371)
.|...++..+...++.++.|++.||+|||+.+.++.++.++...+....++.+.+++.+++.|++....... ..+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788888888888999999999999999999999999888888877777888888888999999886655443 6677888
Q ss_pred ccccchhhhhHh-hhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHH
Q 017429 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI 231 (371)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (371)
.+++.+++..+. .+....+|..++|.++|++.+ .++|+.++.+.++..++..+
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~----------------~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD----------------SIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH----------------hcccHHHHHHHHHHHHHHHH
Confidence 888888877766 577889999999999999998 55667777776666555433
No 164
>TIGR00898 2A0119 cation transport protein.
Probab=99.35 E-value=8.1e-12 Score=118.39 Aligned_cols=137 Identities=20% Similarity=0.118 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHhhhccchhH-HHHHHhhhcc
Q 017429 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGP-IKAYACEIFR 164 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~ 164 (371)
.....+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++.+...+ .+.+.+|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556777889999999999999999999998888888777765433 4444445555565555445 4899999999
Q ss_pred ccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccC
Q 017429 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (371)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (371)
++.|++++|+.+....+|.+++|.+.+ +. ..++..++.+.++..++..+..+++||+..+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~ 500 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LG-----------------EKWLFLPLVLFGGLALLAGILTLFLPETKGV 500 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-----------------HHHHhhHHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 999999999999999999999999998 43 2334455666666666666677788987654
No 165
>PRK15075 citrate-proton symporter; Provisional
Probab=99.33 E-value=3.4e-11 Score=111.81 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=97.8
Q ss_pred hhcccccchhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHH-HHH
Q 017429 53 TALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LFG 130 (371)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~ 130 (371)
..........+.|.+.++ +|.+..+ .++....+.++..++.++.|+++||+|||++++.+.++..+... ...
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 334444566677876654 7998888 88888888899999999999999999999998876554433221 111
Q ss_pred ---hHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhh-hhhhHHhHHHhhhhhhcC
Q 017429 131 ---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 131 ---~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~i~~~l~~ 195 (371)
..++.....+..++.|++.+...+. ..++.|.+|++.|++++++.+. +..+++.++|.+.+.+.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1223333444455556666665554 7889999999999999998644 444567789999999988
No 166
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.32 E-value=2.3e-11 Score=111.31 Aligned_cols=160 Identities=15% Similarity=0.127 Sum_probs=112.1
Q ss_pred HHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHH-HHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 017429 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (371)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (371)
.++............+.+.+|.|.+.++ .|++..... ....++.++.|++.||+|+|+.+..+.++.++..+.
T Consensus 217 ~~l~~~~~~~~~~~~~~~l~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~ 290 (390)
T TIGR02718 217 ALLSAMTAVSGFGLSKLYLVDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALL 290 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3334443444455666777788999998 999888776 466677899999999999999998877665333322
Q ss_pred HHh------HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccc-cchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 129 FGL------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 129 ~~~------~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
... .++...++....+.+++.+...+. .+.+.+..++ +.+++.+++.+...++|..+||.++|.+.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~----- 365 (390)
T TIGR02718 291 WFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD----- 365 (390)
T ss_pred HHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 221 122333344445556666666554 7777777765 889999999999999999999999999998
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHHH
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTI 231 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (371)
..++...+...+++.+++++
T Consensus 366 -----------~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 366 -----------RFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred -----------HHccHHHHHHHHHHHHHHHH
Confidence 55666666766665555443
No 167
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=3.7e-11 Score=105.50 Aligned_cols=149 Identities=13% Similarity=0.138 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc--CCchHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM 117 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~l~~ 117 (371)
+.++.++++.++..+.+..+.-..| ++.|..|.+..+ .++..+.+-++.+.|.+++|+++||+ |||....+
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~ 325 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMAL 325 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHH
Confidence 4566777888888888888888888 555778999988 99999999999999999999999986 66665544
Q ss_pred H-HHHHHHHHHHHHhHH--HHHHHHHHHHHHhhh-ccchhHHHHHHhhhccccchhhhhHhhhhhhhh-HHhHHHhhhhh
Q 017429 118 G-TASVVIFNTLFGLSV--NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGF 192 (371)
Q Consensus 118 ~-~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~i~~~ 192 (371)
. ++...++.+..-.++ |++...++.++.|+. .|...-+.....|..|++--|++.|+.+.+..+ |...+....++
T Consensus 326 i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~ 405 (448)
T COG2271 326 IFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGY 405 (448)
T ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCccee
Confidence 3 333334444443443 557777788888885 455544577888999999999999999888887 88888888888
Q ss_pred hcC
Q 017429 193 LAQ 195 (371)
Q Consensus 193 l~~ 195 (371)
+.|
T Consensus 406 i~d 408 (448)
T COG2271 406 IAD 408 (448)
T ss_pred eEe
Confidence 888
No 168
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.31 E-value=6e-11 Score=110.28 Aligned_cols=176 Identities=11% Similarity=0.035 Sum_probs=107.9
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
++...+..++............|.+.++ .|.+..+ .++....+.++..++.++.|+++||+++++....+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 326 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFF 326 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHH
Confidence 3333333333333334455677766654 6888888 88989999999999999999999999754322233222
Q ss_pred HH---HHHHHHHh--HHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhH-HhHHHhhhhhhc
Q 017429 122 VV---IFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG-LIIGPALGGFLA 194 (371)
Q Consensus 122 ~~---~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~i~~~l~ 194 (371)
.. ++...... ..+.+......++.|++...... ......|.+|+++|+++.|+.+....+| ..++|.+.|.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~ 406 (438)
T TIGR00712 327 MTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 406 (438)
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHH
Confidence 21 11111111 12333333344445543222222 2456779999999999999998877776 578999999999
Q ss_pred CcCCCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhccccc
Q 017429 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 240 (371)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 240 (371)
+ ..+|...+.+.....+++ +...+.+||.+
T Consensus 407 ~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 407 D----------------FFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred H----------------hccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 8 444555555554444443 44566677654
No 169
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.31 E-value=1.1e-11 Score=115.21 Aligned_cols=112 Identities=16% Similarity=0.220 Sum_probs=94.5
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHhhhccchhHH-HHHHhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~ 161 (371)
.+++.+...++.+++.+++++++||+|+|+.+..+.++.+++.+...+. ++.+.+++..++.|++.+...+. .++++|
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVAD 338 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6777778889999999999999999999999999988888877766654 45666677778888888777775 888888
Q ss_pred hcc-------ccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 162 IFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 162 ~~~-------~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
..+ ++.+|...++.+....+|..+++.+.|.+.+
T Consensus 339 ~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 339 TVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred hhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 865 4567899999999999999999999999987
No 170
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.30 E-value=9.7e-11 Score=108.69 Aligned_cols=163 Identities=12% Similarity=0.056 Sum_probs=100.7
Q ss_pred hcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH--
Q 017429 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG-- 130 (371)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-- 130 (371)
....+....++|.+. +++|.+..+ .+...++..++..++.++.|+++||+|||+.+.++.++.++......
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~------~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANV------ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 333444566777655 567888777 88888888888889999999999999999988776655433332221
Q ss_pred h--HHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhh-hHHhHHHhhhhhhcCcCCCCCCcccc
Q 017429 131 L--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALGGFLAQPAEKYPNLFSS 206 (371)
Q Consensus 131 ~--~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~i~~~l~~~~~~~~~~~g~ 206 (371)
. .++....+..-.+.+++.+...+ ...+.+|++|++.|++++|+.+.... +.+...|.+.+.+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~----------- 398 (432)
T PRK10406 330 LQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS----------- 398 (432)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-----------
Confidence 1 12222222222222233333333 47889999999999999999865544 334457887775532
Q ss_pred cccccCccchhHHHHHHHHHHHHHHHHhhccc
Q 017429 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (371)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (371)
...|...+++.++..++..+..+++++
T Consensus 399 -----~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 399 -----IGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred -----hCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 111333445555555555555555443
No 171
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.30 E-value=7.6e-11 Score=108.55 Aligned_cols=127 Identities=13% Similarity=0.010 Sum_probs=100.3
Q ss_pred hhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH-----HHH
Q 017429 62 PFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VNF 135 (371)
Q Consensus 62 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~ 135 (371)
...|.+ .+++|.+..+ .++......++..++.++.|+++||+|+|+.+.++.++.+++..+.... .+.
T Consensus 236 ~~~p~~~~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 309 (406)
T PRK15402 236 ALSPVILISGEQLSSYE------YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAY 309 (406)
T ss_pred HHhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccH
Confidence 345544 4668888877 8888777888889999999999999999999999888777776666543 345
Q ss_pred HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 136 ~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+++++..++.|++.+...+. ..... ..++++|++..+..+....+|..+|+.+++.+.+
T Consensus 310 ~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66777788888887776554 44443 3445889999999999999999999999999987
No 172
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.29 E-value=6.8e-10 Score=104.48 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=114.7
Q ss_pred HHHHHhhccccccccchhhhHHHHH-HHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHH---HhH-HHHHHHH
Q 017429 65 YFMIKDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (371)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~ 139 (371)
|.+.+++|.+..+ .++... ...++.+++.++.|+++||+|+|+.+.++.++.++..+.+ +.. ++.+.+.
T Consensus 247 ~~l~~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~ 320 (491)
T PRK11010 247 TFLIRGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG 320 (491)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4445678999988 998874 5568999999999999999999988877666555443322 222 3444444
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhH
Q 017429 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (371)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 218 (371)
+.-++..++.|...+. .++..+..+++.+++..++.+...++|..+++.++|.+.+ .++|...
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~----------------~~G~~~~ 384 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE----------------AHGWPTF 384 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhChHHH
Confidence 4556655555554454 8888999999999999999999999999989899999998 5567777
Q ss_pred HHHHHHHHHHHHHHHhhcccc
Q 017429 219 CLCISLFAFGVTIAAFWLPET 239 (371)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e~ 239 (371)
+.+.++++++.++....++++
T Consensus 385 f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 788888887777666666654
No 173
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.29 E-value=4.1e-11 Score=112.41 Aligned_cols=155 Identities=10% Similarity=0.048 Sum_probs=98.1
Q ss_pred chhhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCc-------hHHHHHHHHHHHHHHHHHh
Q 017429 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK-------PVIIMGTASVVIFNTLFGL 131 (371)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~ 131 (371)
.....|.+ .+++|.+..+ .+.+.+++.++..++.+++|+++||+||| ..+.+..++.++..++...
T Consensus 271 ~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~ 344 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLET------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR 344 (476)
T ss_pred HHhHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 34445544 5667999888 89999999999999999999999999865 2233333333333444444
Q ss_pred HHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccc
Q 017429 132 SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (371)
Q Consensus 132 ~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~ 210 (371)
.++.+..++..++.+++.+.... ..+++.+.. +++|+...|+.+.+..+|+.++|.+.+ ..+
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~--------------- 407 (476)
T PLN00028 345 ANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGS--------------- 407 (476)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcC---------------
Confidence 55555555555555554333333 355566654 468999999987766666666665533 111
Q ss_pred cCccchhHHHHHHHHHHHHHHHHhhccc
Q 017429 211 GKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (371)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (371)
..+|...+++.+++.+++.+..++.+.
T Consensus 408 -~~~y~~~f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 408 -SYSTETGISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred -CccHhhHHHHHHHHHHHHHHHHHheec
Confidence 234566667777666666666665553
No 174
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.28 E-value=2e-10 Score=105.13 Aligned_cols=125 Identities=11% Similarity=0.004 Sum_probs=97.9
Q ss_pred HHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 017429 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (371)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 143 (371)
.|.+.+++|.+..+ .++....+.++..++.++.|++.||.+++..+....+..+...++....++.+.+.+..+
T Consensus 240 ~p~~~~~~g~s~~~------~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 313 (394)
T PRK10213 240 RPVYMNLAGFGVDG------LTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAI 313 (394)
T ss_pred HHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 36777888999888 899999999999999999999999964443333333334444445455667778888888
Q ss_pred HHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 144 l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.|++.+...+. .+++.+..| +++++..+.......+|..+||.++|.+.+
T Consensus 314 l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 314 IWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999988887776 778888887 456677777778889999999999999998
No 175
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.28 E-value=3.5e-11 Score=109.35 Aligned_cols=147 Identities=16% Similarity=0.150 Sum_probs=101.0
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC-CchHHH-HHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVII-MGT 119 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~l~-~~~ 119 (371)
++.+.+..++............|.+. +++|.+..+ .++..+...++..++.++.|+++||.+ ||+... ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 291 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFF 291 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHH
Confidence 33344444444444445556666554 567888888 899999999999999999999999864 333322 221
Q ss_pred H-HHHHHHHHHHh--HHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 120 A-SVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 120 ~-~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
. ...++...... ..+.....+..++.|+......+ ...+..|.+|+++|+++.++.+....+|..++|.+.|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 292 MALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 1 11222222222 23445555666677765433333 47789999999999999999999999999999999999998
No 176
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.27 E-value=5.2e-11 Score=111.06 Aligned_cols=174 Identities=15% Similarity=0.222 Sum_probs=147.1
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC--CchHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTA 120 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~ 120 (371)
++...+...+..++.......+|.+.++.+.++.+ .+.+.++..+...++.++.|+++|+.. ++.+..++.+
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll 373 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLL 373 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHH
Confidence 34455556666677777778889999999999999 999999999999999999999999988 5566677888
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~ 199 (371)
+.+++.+.++++++++.++..-.+.|++.|.+... ..++.|+.+.++-..+.|+.....+++.++||+++|.+.+..+
T Consensus 374 ~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg- 452 (509)
T KOG2504|consen 374 IAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG- 452 (509)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC-
Confidence 88888889999999999999999999999998887 6799999999999999999999999999999999999888432
Q ss_pred CCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcc
Q 017429 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (371)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (371)
.|...++.++++.+++.+.++..|
T Consensus 453 --------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 --------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred --------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 245556777777777666666666
No 177
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.27 E-value=1.3e-10 Score=105.68 Aligned_cols=183 Identities=16% Similarity=0.273 Sum_probs=135.7
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhc-cccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 119 (371)
+++....+..++.......+..+.+.+.++.| .+... .+...++..++-++.-...+++..|+|.|+++.++.
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 33444555666777777778888888888888 66666 787778888888899999999999999999999999
Q ss_pred HHHHHHHHHHHhH-HHHHHHHHH----HHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhh-hhhhHHhHHHhhhhh
Q 017429 120 ASVVIFNTLFGLS-VNFWMAVLT----RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGF 192 (371)
Q Consensus 120 ~~~~~~~~~~~~~-~~~~~~~~~----r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~i~~~ 192 (371)
+..++=..+++.. ++.+..++. ..+.|+..+....+ ..++.+..|++.|+++.++++. ..++|..+|..++|+
T Consensus 281 ~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 281 VAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999988888876 444443333 35689988887775 9999999999999999999865 578999999999999
Q ss_pred hcCcCCCCCCcccccccccCccchhHHHHHHHHHHHH-HHHHhhcccc
Q 017429 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPET 239 (371)
Q Consensus 193 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~ 239 (371)
+.+ .+|-+..+ .|...+.+.++..++. ++.+++.||+
T Consensus 361 l~~-------~~g~~~~~---~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 361 LYD-------AFGARGMF---DWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHH-------Hhcchhhh---hHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 998 44444433 1333334444444433 3344455554
No 178
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.27 E-value=1.6e-10 Score=104.39 Aligned_cols=140 Identities=13% Similarity=0.030 Sum_probs=106.3
Q ss_pred HHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-CCchHHHHHHHHHHHHHHH
Q 017429 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNTL 128 (371)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~ 128 (371)
.++...........+|.+.++.|.+..+ .+...+...++.+++.++.|++.||+ +||+.+.++.++.+++.+.
T Consensus 206 ~~~~~~~~~~~~~~lp~~~~~~g~~~~~------~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 279 (355)
T TIGR00896 206 FGLQSGLYYSLIGWLPAILISHGASAAT------AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCG 279 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Confidence 3333444444556778888888998888 99999999999999999999999999 5677777777777777766
Q ss_pred HHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-ccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 129 ~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
..+..+..... ..++.|++.+...+. .+.+.+..+ +++++...++.+....+|..++|.+.|.+.+.
T Consensus 280 ~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 280 LLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred HHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654433222 346778888887775 666665544 56678888988888888999999999999984
No 179
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.25 E-value=3e-11 Score=103.85 Aligned_cols=133 Identities=21% Similarity=0.266 Sum_probs=97.4
Q ss_pred HHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh-ccchhHHHHHHhhhccccchh
Q 017429 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQA 169 (371)
Q Consensus 91 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~r~ 169 (371)
..+.-+.|.++.+.+.||+|||+.+..+.++++++.++...+.+.....+.-+..-++ .|++.++++|..|.+|...|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 3456678999999999999999999999999999988887765433333333333332 455666799999999999999
Q ss_pred hhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcc-cccc
Q 017429 170 LGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP-ETLH 241 (371)
Q Consensus 170 ~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~ 241 (371)
.+.|..+...-+|+++.|+++ ...+ -+-..+..+...+.+++.+...++| |++.
T Consensus 470 tgvGtcSsmaRIggI~~p~iA-~~~e-----------------~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA-MRAE-----------------LSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH-HHhc-----------------cceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 999999999999999999999 3332 1223444555556666666666666 5543
No 180
>PRK10054 putative transporter; Provisional
Probab=99.24 E-value=8.7e-11 Score=107.60 Aligned_cols=111 Identities=16% Similarity=0.033 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHhhhccchhHH-HHHHhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~ 161 (371)
.+++.+...+......++.|++.||+++|+.+..+.++..++.....+. ++.+.+++..++.|++.+...|. ..++.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~ 325 (395)
T PRK10054 246 VAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDH 325 (395)
T ss_pred HHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 6777777777777788899999999999999999988888887766654 56776777888899988777776 889999
Q ss_pred hccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
..|++.|++..+..+ ...+|..+||.++|.+.+
T Consensus 326 ~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~ 358 (395)
T PRK10054 326 IAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT 358 (395)
T ss_pred hCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999988655 556899999999999998
No 181
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.24 E-value=1.6e-10 Score=101.62 Aligned_cols=154 Identities=15% Similarity=0.171 Sum_probs=127.6
Q ss_pred HHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 017429 65 YFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (371)
Q Consensus 65 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 143 (371)
..+. .++|++..+ ..++.....+..+++++++|++.||+|.|+++..+.++..+.++...+......+.+.-.
T Consensus 276 ~~fg~~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gl 349 (438)
T COG2270 276 GVFGAADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGL 349 (438)
T ss_pred HHHHHHHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 3444 499999999 999999999999999999999999999999999999999888887777776777777788
Q ss_pred HHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHH
Q 017429 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 222 (371)
Q Consensus 144 l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 222 (371)
+.|+..|..+.. .++.+++.|+++-++.+|+++.....+..+||.+-+.+.+..++ -|.-+...
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~---------------~r~g~~~i 414 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS---------------SRAGVLSI 414 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc---------------hhhHHHHH
Confidence 899988887775 99999999999999999999999999999999999999884332 33334555
Q ss_pred HHHHHHHHHHHhhcccc
Q 017429 223 SLFAFGVTIAAFWLPET 239 (371)
Q Consensus 223 ~~~~~~~~~~~~~~~e~ 239 (371)
.++..+.++..+++|++
T Consensus 415 ~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 415 IVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHhhHhhEEeecCC
Confidence 55555556666666665
No 182
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.22 E-value=3.9e-10 Score=99.48 Aligned_cols=146 Identities=16% Similarity=0.117 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHh---hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
+.+....+..++..........+.+.+.++ +|+++++ .++..+.+..+..++.++.+++.||+|+|+++.+
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~ 213 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF 213 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 334444455555554555556677766643 5888888 9999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.++..++.++....++... ...-++.|++.+...|. .+...+..|++ .+.+.++. ....+|+.++|.+.|.+.|
T Consensus 214 ~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 214 NAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 88877777665555444332 23455788888887775 77887877764 34555654 4566899999999999998
No 183
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.22 E-value=4.3e-10 Score=102.65 Aligned_cols=123 Identities=13% Similarity=0.119 Sum_probs=90.6
Q ss_pred HHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHH
Q 017429 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRF 143 (371)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~ 143 (371)
|.+.+.+|.+..+ .++..+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..+
T Consensus 224 ~~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETS------MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4555668998888 999999999999999999999999999999999888887777655543 445555555666
Q ss_pred HHhhhccc-hhHHH-HHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 144 LLGSLNGL-LGPIK-AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 144 l~G~~~~~-~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.+++... ..+.. ....+..+++.++.+ ..+....+|..+||.++|.+.+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHH
Confidence 66665433 33333 344444455555544 3456788999999999999988
No 184
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.1e-10 Score=101.52 Aligned_cols=147 Identities=22% Similarity=0.329 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh----hcCCchHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVII 116 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~l~ 116 (371)
+.++.+....+...++...-..+.+++.+++|++.+- .+.+-...-+...+.+|+.|..+| ||||||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCccc------ccccccccccccceecccccccccccccccccccchH
Confidence 5555555555555566666667778888999999887 777666777777899999999999 689877766
Q ss_pred H-HHHHHHHHHHHHHhHHHHH-----------------HHHHHHHHHhhhc-cchhHHHHHHhhhccccchhh-hhHhhh
Q 017429 117 M-GTASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQAL-GLSTVS 176 (371)
Q Consensus 117 ~-~~~~~~~~~~~~~~~~~~~-----------------~~~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~r~~-~~~~~~ 176 (371)
. +.+...++.++..++.++. .+++..-+.-++. -...|+.++++|...++++.+ +++.+.
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 5 4566667777777654432 2333333444443 456678999999998777666 999999
Q ss_pred hhhhhHHhHHHhhhhhh
Q 017429 177 TAWGIGLIIGPALGGFL 193 (371)
Q Consensus 177 ~~~~~g~~~g~~i~~~l 193 (371)
...++|+.+|..+++++
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999998887643
No 185
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=5.4e-10 Score=92.88 Aligned_cols=124 Identities=20% Similarity=0.269 Sum_probs=100.4
Q ss_pred HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHH
Q 017429 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA-SVVIFNTLFGLSVNFWMAVLTRFL 144 (371)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~r~l 144 (371)
.+.+++|+|..+ .+-+.+....-..+.+++.|.++||+|++...+.+.. ...++.....+ +.+.=+....+
T Consensus 290 fF~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~ 361 (459)
T KOG4686|consen 290 FFQKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTF 361 (459)
T ss_pred HHHHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHH
Confidence 567899999988 8888888888889999999999999999987776544 34444444433 22233456677
Q ss_pred HhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 145 ~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
.|+........ +..++.+.|+++-|++.|..+...++|-.+.|+++|++.+..
T Consensus 362 lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 362 LGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD 415 (459)
T ss_pred HhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC
Confidence 88887777775 889999999999999999999999999999999999999843
No 186
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.19 E-value=2.2e-10 Score=105.10 Aligned_cols=130 Identities=11% Similarity=0.048 Sum_probs=103.5
Q ss_pred hhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh-cCCchHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017429 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (371)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (371)
....|.+.++.+.++.+ .+++.+...++...+..+.+++.|| ++.++.+..+.++.+++.++.+..++.+.+.
T Consensus 228 ~~~~p~~~~~~~~~~~~------~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 301 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSA------VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLF 301 (400)
T ss_pred HHhhhhhHHhhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34567766666556666 8888777777666666666776664 6667777788888888877777788887777
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
+..++.|++.+...+. .+++.|..|+++|++++++.+....+|..+||.++|++.+.
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 7778888887777665 89999999999999999999999999999999999999883
No 187
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.18 E-value=1.9e-09 Score=90.52 Aligned_cols=134 Identities=13% Similarity=0.184 Sum_probs=106.1
Q ss_pred hcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH-
Q 017429 54 ALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS- 132 (371)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~- 132 (371)
....+.+..+.|.+.+++|.+.+| ...+.++..+|..+ +++.|.+.|++|++.++.+|.+...++..+...+
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 335567778889999999999999 99999999999876 5899999999999999999999999988776552
Q ss_pred ------HHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 133 ------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 133 ------~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.++|.+.+..++.|.+.+.... +.....+.|| ++||++.|+.-...++++.+-..+...+..
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 3566776666777666555544 3566668887 579999999988888888776666655554
No 188
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.18 E-value=4.6e-10 Score=105.25 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHH----
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI---- 115 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l---- 115 (371)
+.++...+..+............+|.+. +++|.+..+ .++..++..++..++.++.|+++||+++|+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~ 334 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKE------NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTA 334 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 3445555566666666666667778554 568998888 99999999999999999999999998754321
Q ss_pred ----HHHHHHH--HHHHHHHHh-HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHH
Q 017429 116 ----IMGTASV--VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (371)
Q Consensus 116 ----~~~~~~~--~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (371)
..+.... ++..+.... ..+....++.-.+.+.+.+...+. .....|..|+ .+|...++.+....+|+.++|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p 413 (465)
T TIGR00894 335 ARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIAS 413 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111111111 223333344444444444443343 4455566665 799999999999999999999
Q ss_pred hhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcc
Q 017429 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (371)
Q Consensus 188 ~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (371)
.+.+.+.+.. + ...|...+.+.++..++..+.....+
T Consensus 414 ~l~g~~~~~~-------~------~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 414 TLAGNILSQD-------S------KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HhhheeeCCC-------C------chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 9999887621 0 12366666777666666555544443
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.17 E-value=3.7e-10 Score=103.80 Aligned_cols=149 Identities=14% Similarity=0.167 Sum_probs=100.7
Q ss_pred HHHHHhhccccccccchhhhHHHHHHHH-HHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHH---HhH-HHHHHHH
Q 017429 65 YFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (371)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~ 139 (371)
+.+.+++|.+.++ .+++..... ++..++.++.|++.||+|||+.+..+.++..+..+.. +.. ++.+.++
T Consensus 234 ~~l~~~~G~~~~~------~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 307 (402)
T PRK11902 234 TFLIRGAGFSAGE------VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMA 307 (402)
T ss_pred HHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4566778999888 888876654 5678999999999999999998887776665554333 333 3455555
Q ss_pred HHHHH----HhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCcc
Q 017429 140 LTRFL----LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (371)
Q Consensus 140 ~~r~l----~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~ 214 (371)
+.-++ .|++.+...+. ..++.+.+|.+++ ++.+...++|...++.++|.+.+ .++
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~----------------~~G 367 (402)
T PRK11902 308 LAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVE----------------AYG 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHH----------------HhC
Confidence 55443 34444444443 6677777766554 45555556777766778999998 666
Q ss_pred chhHHHHHHHHHHHHHHHHhhcccc
Q 017429 215 YFLPCLCISLFAFGVTIAAFWLPET 239 (371)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (371)
|+..+...++++++.++.....+.+
T Consensus 368 ~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 368 WPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 7777777777777666655554443
No 190
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.17 E-value=3.9e-10 Score=103.93 Aligned_cols=147 Identities=12% Similarity=0.132 Sum_probs=98.6
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhh--ccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchH-HHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDF--QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV-IIMGT 119 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-l~~~~ 119 (371)
++...+..++...........+|.+.+++ +.+..+ .+.......++..++.++.|+++||++||+. +....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~------~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~ 317 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM------IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY 317 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence 33444445555555666778889888875 456666 8888999999999999999999999997775 33343
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+...++..+.....+....+.+-.+.+++.....+. .....|.+|+++|++++|+.+....+|+.++|.+.+.+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 318 LFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 343333322222222222222222223332222333 4555678999999999999999999999999999999988
No 191
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.15 E-value=1.2e-09 Score=100.81 Aligned_cols=274 Identities=18% Similarity=0.174 Sum_probs=158.0
Q ss_pred hhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-----CCchHHHHHHHHHHHHHHHHHhH---
Q 017429 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPVIIMGTASVVIFNTLFGLS--- 132 (371)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~~--- 132 (371)
.+..|.+.+++|+++++ .....+...+.. ...++.|.++|.+ .||+.++++.++..++.+.++..
T Consensus 10 ~~~~~~l~~~l~ls~~~------~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQ------LQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHHcCCCHHH------HHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence 35567888999999998 777777766664 4578999999976 36666677777776655555542
Q ss_pred -HHHHHHHHHHHHHhhhccchhHH-HHHHhhhcc--ccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccc
Q 017429 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (371)
Q Consensus 133 -~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~ 208 (371)
.+.....+.-++..+|.+...++ -+...|... ++.|+...+.......+|.+++..++|.+.+
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~------------- 149 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD------------- 149 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------------
Confidence 34555555556666777776664 788888763 3347888888888999999999999999988
Q ss_pred cccCccchhHHHHHHHHHHHHHHH-HhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHH
Q 017429 209 LFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (371)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (371)
..+++..+.+.+.+..+..+. .+..+|.+.....+.. ....+..+..... .++.....++.++.+.++..
T Consensus 150 ---~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~i~~~ 220 (433)
T PF03092_consen 150 ---SFGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVF--SFGKEEVPCLFGS----FREQLSELWRALQQRAIWQP 220 (433)
T ss_pred ---cCCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhh--cccccccchhhHH----HHHHHHHHHHHHhhhHHHHH
Confidence 333333345555555554444 4444442111111000 0000000000000 00111234455666777766
Q ss_pred HH-HHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhh
Q 017429 288 II-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEH 366 (371)
Q Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 366 (371)
.+ ..++.......... -..|.... ...+.|+++...+.+..+..++.+++.. +......+.+-|++.....++..+
T Consensus 221 ~~~~~~~~~~~~~~~~a-~~fy~~~~-~~~gp~fs~~f~~~~~~vg~~~~l~g~~-~y~~~~~~~~~R~~~~~t~~~~~~ 297 (433)
T PF03092_consen 221 ILFFIFFFNLPPSISSA-SSFYFQTD-ALGGPHFSPSFYGTLSIVGSIASLLGIL-LYRKYFSNWSWRRIFVVTTLVSVL 297 (433)
T ss_pred HHHHHHHHHhccCCCCc-cEEEEEec-cccccccCHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHH
Confidence 55 33322222211111 01122211 1114558999999998777777777774 455555566777777666655443
No 192
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.15 E-value=1.2e-09 Score=98.02 Aligned_cols=143 Identities=25% Similarity=0.284 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhh
Q 017429 83 YAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (371)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~ 161 (371)
..|.+.+...+.-++...+..++.+|+|.|+.++++..+..+=...++++++++.+.+.+.+.|+-.+..... ..|+++
T Consensus 260 ~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~ 339 (412)
T PF01306_consen 260 MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITA 339 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999999999999999988877765 999999
Q ss_pred hccccchhhhhHhh-hhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHH-HHHhhcccc
Q 017429 162 IFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPET 239 (371)
Q Consensus 162 ~~~~~~r~~~~~~~-~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~ 239 (371)
.+|+|..++...+. +.+.++|..+.+.++|.+.| +.|++..+++++.+.++.. +..+.++++
T Consensus 340 ~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd----------------~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 340 HFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD----------------RIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred hCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh----------------hcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 99999988888875 78899999999999999999 7777777777776666544 455666654
Q ss_pred cc
Q 017429 240 LH 241 (371)
Q Consensus 240 ~~ 241 (371)
++
T Consensus 404 ~~ 405 (412)
T PF01306_consen 404 KK 405 (412)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 193
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=4.5e-10 Score=98.85 Aligned_cols=172 Identities=17% Similarity=0.186 Sum_probs=123.9
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
.++.+.+++.++....+.-.++..+| ++.++|+.+..+ .+.....+.+...+..+.+|+++||+|.+|++.+.
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~------Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~ 290 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT------AGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAV 290 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------HHHHHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence 45566666666666665556677777 566889999999 99999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhH-------HHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 119 TASVVIFNTLFGLS-------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 119 ~~~~~~~~~~~~~~-------~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
...++++..+..+. .+....++..+..+++.|.-.. ++..+..++|+ +-|.+.|+.....++|+.+-|..-
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~ 369 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAF 369 (417)
T ss_pred HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHH
Confidence 88888887776654 3344444444444444443333 46667777765 578889999999999999999999
Q ss_pred hhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHH
Q 017429 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (371)
Q Consensus 191 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (371)
+...+.++ .+...+++.....+++.+..
T Consensus 370 g~~~~~tg---------------~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 370 GVSLDLTG---------------SYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred HHHHHhcc---------------cHHHHHHHHHHHHHHHHHHH
Confidence 98887322 24455555555555554443
No 194
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=4.8e-10 Score=105.73 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=114.0
Q ss_pred HHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 017429 47 WIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (371)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 125 (371)
.+..++............|.+. +.+|.+..+ .++......++..++.++.|++.||+|||+.+.++..+.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQ------AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVG 334 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Confidence 3344444444444455667555 457888888 999999999999999999999999999999999998888888
Q ss_pred HHHHHh----HHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 126 NTLFGL----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 126 ~~~~~~----~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
..+..+ ..+.+.+....++.|++.+...+ ......+..|+++|+++.++.+....+|..+|+.+.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 335 FYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776662 23456666777888998877655 46777788899999999999999999999999999988876
No 195
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.12 E-value=6.8e-10 Score=100.33 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=101.4
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHH-HHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
++...+..++............|.+.+++|.+.++ .+.+.++.. ++..++.+++|++.||+|||+.+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE------IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 33333344444455555566777777778998888 888777665 57789999999999999999999988888
Q ss_pred HHHHHHHHHhH-----------HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhh
Q 017429 122 VVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (371)
Q Consensus 122 ~~~~~~~~~~~-----------~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~ 180 (371)
.++...+..+. ++.+.+....++.+++.+...+. .+++.|.+|+++|++.+++.++..+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 77766655442 34566777888889998887775 9999999999999999999876543
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.11 E-value=2e-09 Score=98.59 Aligned_cols=120 Identities=12% Similarity=0.054 Sum_probs=82.8
Q ss_pred HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 017429 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (371)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 145 (371)
.+.+++|.+..+ .+...+...++..++.++.|++.||+|||+.+.++.++..++.+...+.++.+..+..-.+.
T Consensus 229 ~~~~~~g~~~~~------~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (392)
T PRK10473 229 LLMEQMGFSRGE------YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLI 302 (392)
T ss_pred HHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678888888 89999999999999999999999999999999999988888887777766555444444444
Q ss_pred hhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 146 GSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 146 G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.+.+...+ .....+..|.++|+ +.......++..+++.+++++.+
T Consensus 303 ~~g~~~~~~-~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 303 CAGFSVGFG-VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHHHhH-HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 443332222 12233444554443 33444456677777777777776
No 197
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.11 E-value=1.3e-09 Score=113.51 Aligned_cols=130 Identities=14% Similarity=0.121 Sum_probs=111.5
Q ss_pred chhhHH-HHHHhhccccc-cccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHH
Q 017429 60 LFPFLY-FMIKDFQIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (371)
Q Consensus 60 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (371)
....+| ++.+.+|.+.. + .+++.+...++.++++++.|+++||+++|+++.++.++.+++.++..+..+.+.
T Consensus 251 ~~~~~~~~~~~~~g~s~~~~------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (1146)
T PRK08633 251 AQANFPAYAKEVLGLDNTFQ------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLAS 324 (1146)
T ss_pred HHHhhHHHHHHHhCCCcHHH------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHH
Confidence 344455 44567888887 7 899999999999999999999999999999999988888888888888888888
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+++..++.|++.+...+. .+++.+..|++.|++++++.+....+|.++++.+++.+..
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 325 VLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999988877665 8999999999999999999999999999888888877653
No 198
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.10 E-value=1.8e-09 Score=98.61 Aligned_cols=123 Identities=19% Similarity=0.251 Sum_probs=91.6
Q ss_pred hhhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH-----HH
Q 017429 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VN 134 (371)
Q Consensus 61 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~ 134 (371)
....|.+ .+++|.++.+ .+++.+...++..++.++.|++.||+|||+.+..+..+..++.+++... ++
T Consensus 226 ~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSV------FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGS 299 (385)
T ss_pred HHcChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3344544 4578888888 9999999999999999999999999999999988887777766655543 23
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhh-hHHhHHHhhh
Q 017429 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALG 190 (371)
Q Consensus 135 ~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~i~ 190 (371)
...++...++.|++.+...+. .....|..| ++|+++.++.+.... +|.+.+|.++
T Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 300 WAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555567778877776665 777788776 578999998876554 4566666554
No 199
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.10 E-value=3.6e-09 Score=98.12 Aligned_cols=149 Identities=18% Similarity=0.211 Sum_probs=121.8
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.+..+....++............+++.++.--++.. .+.+..+..++..++.+++++++||+|+|+.+..+.+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~------~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~ 298 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL------ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLL 298 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh------hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHH
Confidence 4455566666666677676677777666654333345 7788888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHH--HHHHHHHHHHHHhhhccchhHH-HHHHhhhccc-------cchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 121 SVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 121 ~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
+.+++.++..+.+ +.+.+++..++.|++.+...+. .++++|..+. ++.|...+..+....+|..+++.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 299 LAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 9999998888775 8999999999999998887775 9999998873 3457888888999999999999999
Q ss_pred hhhcC
Q 017429 191 GFLAQ 195 (371)
Q Consensus 191 ~~l~~ 195 (371)
+.+.+
T Consensus 379 g~~l~ 383 (428)
T PF13347_consen 379 GLLLA 383 (428)
T ss_pred HHHHH
Confidence 98876
No 200
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.10 E-value=3.5e-10 Score=101.84 Aligned_cols=132 Identities=20% Similarity=0.255 Sum_probs=107.5
Q ss_pred HHHhhcccccchhhHHHH-HHhhccc-cccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHH
Q 017429 50 VLCTALPISSLFPFLYFM-IKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (371)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 127 (371)
.++............|.+ .+++|.+ ..+ .+...+...++..++.++.|++.||+|+|+..........+..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 288 (352)
T PF07690_consen 215 FFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGAL 288 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcccchhhhhccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 333333444467777776 7888998 677 88889999999999999999999999998888887777777666
Q ss_pred HHHhH---HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHH
Q 017429 128 LFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (371)
Q Consensus 128 ~~~~~---~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (371)
..... ++....+...++.|++.+...+. ..++.|..|+++|+++.++.+...++|..+||
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 289 GLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 65543 34567777788899988887775 99999999999999999999999999999987
No 201
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.08 E-value=6.9e-08 Score=86.35 Aligned_cols=178 Identities=18% Similarity=0.173 Sum_probs=129.8
Q ss_pred HHHHHHHHHHhhcccccchhhH-HHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFL-YFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
...+++..|+..+-- .-|++ |++.+. .|++++|. ..-+.-...-.+....++...+.|..|.|++++++.+
T Consensus 7 ~~llc~~gf~~~frP--sEPfl~~yL~~~~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~ 79 (412)
T PF01770_consen 7 TLLLCLFGFFKEFRP--SEPFLTPYLTGPDKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQAL 79 (412)
T ss_pred HHHHHHHHHHHhcCC--CCccchHHHcCCccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 334444444444422 23544 444444 78887762 2233444455667788899999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~ 200 (371)
...+...+..+.++...+-+.-+..|++.+.-.+-++++-...|+++-.++.+...++..+|..++.++|-.+...
T Consensus 80 ~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~---- 155 (412)
T PF01770_consen 80 SYIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF---- 155 (412)
T ss_pred HHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 9999999999999999999999999998777555588888888999888999988888889999998888877651
Q ss_pred CCcccccccccCccchhHHHHHHHHHHHHHHHHhhcccccc
Q 017429 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (371)
Q Consensus 201 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (371)
+..++....++......++++..+++|..++
T Consensus 156 ----------~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 156 ----------GGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred ----------cCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 1334555555555555566667778887654
No 202
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.08 E-value=4.8e-09 Score=94.92 Aligned_cols=144 Identities=12% Similarity=0.049 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCc---hHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK---PVIIM 117 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr---~~l~~ 117 (371)
+.++.+.+..++...........+|.+.++.|.+. + .+....+..+...++ .++++||.+|| +....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~-~------~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~ 261 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED-I------AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIR 261 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-H------HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHH
Confidence 44555666666666666677788998888877664 3 445455555444444 46777776543 33332
Q ss_pred -HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
..++.++.....+...+....++.-.+.+++.....+ .+++.+|.+|++.|+++.|+.+....+|+..+|.+.+.+.
T Consensus 262 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 262 AAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3333344444444444444444455556665555545 4889999999999999999999999999999999888776
No 203
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.08 E-value=1.5e-09 Score=102.52 Aligned_cols=141 Identities=16% Similarity=0.123 Sum_probs=112.0
Q ss_pred HHHHhhcccccchhhHHHH-HHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHH
Q 017429 49 IVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (371)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 127 (371)
..+...........+.|.+ ++.+|.+..+ .|+......++..++.++.|++.||+|+|+.+..+.++.+++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~------ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~ 340 (495)
T PRK14995 267 MAMTAMITLVGFELLMAQELQFVHGLSPLE------AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFY 340 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 3333333333344555644 4557999988 99999999999999999999999999999999988888877766
Q ss_pred HHHhH---HHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 128 LFGLS---VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 128 ~~~~~---~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.... ++.+......++.|++.|...+ ....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 341 ~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 341 GLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55432 3555666778889999887766 47788888999999999999999999999999999988865
No 204
>PRK11043 putative transporter; Provisional
Probab=99.06 E-value=4.5e-09 Score=96.63 Aligned_cols=128 Identities=11% Similarity=0.027 Sum_probs=94.6
Q ss_pred hhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH---h--HHHH
Q 017429 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---L--SVNF 135 (371)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~--~~~~ 135 (371)
....|.+.+++|.+..+ .++......++..++.++.+++.||+|+|+.+....+..+++.+... . .++.
T Consensus 223 ~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (401)
T PRK11043 223 LTGSPFILEQMGYSPAD------IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSL 296 (401)
T ss_pred HHHhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcH
Confidence 44567777888998888 88888888888899999999999999999877665554444433221 1 2344
Q ss_pred HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 136 ~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.+++...+.|++.+...+. .....|..| ++|+++.++.+.....+...++.+.+.+.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 297 VPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 55555566777777766664 666667665 579999999988878888888888888876
No 205
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.05 E-value=1e-08 Score=93.96 Aligned_cols=122 Identities=13% Similarity=0.095 Sum_probs=98.7
Q ss_pred HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 017429 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (371)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 145 (371)
...+.+|.++.+ .|++.+...++..+++++.+++.||.++|+++..+.. .++..+...+.++++...+..++.
T Consensus 231 ~~~~~lg~s~~~------~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK11195 231 WAPVALGITLNQ------PAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILI 303 (393)
T ss_pred HHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 445568999888 9999999999999999999999999999988887753 344444555667777777777888
Q ss_pred hhhccchhH-HHHHHhhhccccc-hhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 146 GSLNGLLGP-IKAYACEIFREEH-QALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 146 G~~~~~~~~-~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
|++.+...+ ..+.+.|..|++. +|++.++.+....+|..++..+.+.+.
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 998887666 4777777766554 799999999999999999999988664
No 206
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.04 E-value=2.5e-09 Score=111.29 Aligned_cols=144 Identities=13% Similarity=0.067 Sum_probs=112.0
Q ss_pred HHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 124 (371)
..+..++..+.........|.+. +.+|.+..+ .|++.+++.++.++++++.|+++|+.++++.+..+.++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 230 AILGISWFWLVGAVVLSQLPLLAKETLGGDENV------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGL 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHH
Confidence 33333333333344445666555 457888888 99999999999999999999999988877776666665555
Q ss_pred HHHHHHhH--------------------HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHH
Q 017429 125 FNTLFGLS--------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL 183 (371)
Q Consensus 125 ~~~~~~~~--------------------~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 183 (371)
+.+...+. .+.+.+++..++.|++.+...+. .+++.+.+|++.||+++|..++...+|.
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~ 383 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFM 383 (1140)
T ss_pred HHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHH
Confidence 55444332 56677788888899988887764 9999999999999999999999999999
Q ss_pred hHHHhhhhhhcC
Q 017429 184 IIGPALGGFLAQ 195 (371)
Q Consensus 184 ~~g~~i~~~l~~ 195 (371)
.+++++.+.+.+
T Consensus 384 ~ig~~~~g~l~~ 395 (1140)
T PRK06814 384 VAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHH
Confidence 999999998874
No 207
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.04 E-value=7.6e-09 Score=95.02 Aligned_cols=147 Identities=20% Similarity=0.147 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
..+.+++..++....+......+|.+.++ ..+... ......+..+...+..+++|+++||+|+|+++.++.+.
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~------~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~ 325 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVN------ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIF 325 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHH------HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHH
Confidence 34545555555554444455566766544 223222 22223445577788899999999999999999998887
Q ss_pred HHHHHHHHHh-H-----HHHHHHHHHHHHHhhhccchhH-HHHHHhhhccc---------------------cchhhhhH
Q 017429 122 VVIFNTLFGL-S-----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE---------------------EHQALGLS 173 (371)
Q Consensus 122 ~~~~~~~~~~-~-----~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~---------------------~~r~~~~~ 173 (371)
..++...... . .+++.+.+..+...++.|.-.. +..++.+.+|+ ++-|.+.|
T Consensus 326 ~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G 405 (462)
T PRK15034 326 MAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALG 405 (462)
T ss_pred HHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHH
Confidence 7766543222 1 2455555555444455554433 47777777764 14567788
Q ss_pred hhhhhhhhHHhHHHhhhhhhcC
Q 017429 174 TVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 174 ~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+.....++|+.+-|.+-+...+
T Consensus 406 ~v~a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 406 FISAIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHHHHcccchhhHHHHHHHH
Confidence 8888888888888987777766
No 208
>PRK10133 L-fucose transporter; Provisional
Probab=99.03 E-value=4.3e-09 Score=97.63 Aligned_cols=125 Identities=11% Similarity=0.053 Sum_probs=96.4
Q ss_pred hhHHHH-H-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017429 62 PFLYFM-I-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (371)
Q Consensus 62 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (371)
.+.+.+ . +.+|.++.+ .++....+.++..++.++.|++.||+|||+++..+.++.++..++..+.++.. .+
T Consensus 279 ~~~~~~l~~~~~g~s~~~------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~ 351 (438)
T PRK10133 279 SYLIRYAVEEIPGMTAGF------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GL 351 (438)
T ss_pred HHHHHHHhhhcCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HH
Confidence 344433 3 467999998 99999999999999999999999999999999988877776666555544432 24
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
..-.+.|++.+...|. .+...|..|++ .+.+.++... ..+|+.++|.+.|.+.+
T Consensus 352 ~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 352 IALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHH
Confidence 5567789998888885 88888887654 5666776654 44678888899999887
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=99.03 E-value=1.1e-09 Score=102.19 Aligned_cols=147 Identities=16% Similarity=0.141 Sum_probs=104.3
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHH-hhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
+....+..++............|.+.+ .+|.+... .++......++.+++.++.+++.||+|+|+.+.++.++
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~ 303 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF------TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALL 303 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 333333333333333333344444433 35554433 44444444667788999999999999999999999988
Q ss_pred HHHHHHHHHhH--HHHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc-------chhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 122 VVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE-------HQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 122 ~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
.+++.+...+. .+.+.+++..++.|+|.+...+. .+..+|..|.+ ++|...++.+....+|..+|+.+.+
T Consensus 304 ~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 304 GTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877766654 35666777778889988887775 88888888754 3588889999999999999999999
Q ss_pred hhcC
Q 017429 192 FLAQ 195 (371)
Q Consensus 192 ~l~~ 195 (371)
.+.+
T Consensus 384 ~~l~ 387 (448)
T PRK09848 384 FILG 387 (448)
T ss_pred HHHH
Confidence 8876
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=2.7e-09 Score=100.21 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=103.3
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
+.+..+....++............+++.+...-+.+. .+++.+...++.+++.+++++++||+|+|+.+.++.+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL------FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 3344333444444444444444444444443333334 6667777778889999999999999999999998887
Q ss_pred HHHHHHHHHHh-----HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-------ccchhhhhHhhhhhhhhHHhHHH
Q 017429 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGP 187 (371)
Q Consensus 121 ~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~ 187 (371)
+.+++.+.... ..+.+.+++.-++.|++.+...+. .++++|..+ .+..|..++......-+|..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 76665554432 345666667777888887777775 889999866 33345577888888999999999
Q ss_pred hhhhhhcC
Q 017429 188 ALGGFLAQ 195 (371)
Q Consensus 188 ~i~~~l~~ 195 (371)
.+.|++.+
T Consensus 385 ~i~g~~l~ 392 (473)
T PRK10429 385 FFIGVVLG 392 (473)
T ss_pred HHHHHHHH
Confidence 99999887
No 211
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.98 E-value=1.9e-07 Score=89.81 Aligned_cols=159 Identities=15% Similarity=0.143 Sum_probs=113.0
Q ss_pred chhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh-cCCchHHHHHHHHHHHHHHHHHhHHH----
Q 017429 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVN---- 134 (371)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~---- 134 (371)
...+..++.+.+|.+.++ ...+...+....-+..+++|.++|+ +||++.+.++.++..++..+.++...
T Consensus 7 ~aiLvlYl~~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 7 RTILVLYFLNFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred HHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 334445667778888877 6777777777777889999999996 59999999999999999887776321
Q ss_pred ----HHHHHHHHHHHhhhccchhHH-HHHHhhhcccc---chhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccc
Q 017429 135 ----FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (371)
Q Consensus 135 ----~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~ 206 (371)
....+++-.+..+|.|..-++ .+...|.++++ +|.+.+.++..+.++|+.+++.+.+++.+..+.+..
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~---- 156 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGC---- 156 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc----
Confidence 123455556666777777775 99999998754 366788888999999999999999888642111000
Q ss_pred cccccCccchhHHHHHHHHHHHHHHHH
Q 017429 207 ESLFGKFPYFLPCLCISLFAFGVTIAA 233 (371)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (371)
..+|...+.+.++..+++++..
T Consensus 157 -----~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 157 -----QDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred -----CcchHHHHHHHHHHHHHHHHHH
Confidence 2346666666666655554443
No 212
>PRK09669 putative symporter YagG; Provisional
Probab=98.94 E-value=5.1e-09 Score=97.58 Aligned_cols=112 Identities=19% Similarity=0.262 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHH-Hh-HHHHHHHHHHHHHHhhhccchhHH-HHHHh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF-GL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~-~~-~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~ 160 (371)
.+.+.....++.+++.+++++++||+|+|+.+..+.++.++..+.. .. .++.+.+++..++.|++.+...+. .++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566677888899999999999999999998877665443322 22 356777788888899998887776 99999
Q ss_pred hhccc-------cchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 161 EIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 161 ~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
|..+. +..|...+..+.+..+|..+|+.++|.+.+
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98862 223556788888889999999999999887
No 213
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.93 E-value=3e-08 Score=90.32 Aligned_cols=123 Identities=17% Similarity=0.173 Sum_probs=82.5
Q ss_pred hhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH---h-HHHHH
Q 017429 62 PFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---L-SVNFW 136 (371)
Q Consensus 62 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~ 136 (371)
...| .+.+++|.+..+ .++..+...++..++.++.|++.||+|||+.+..+.++..+..+... . ..+.+
T Consensus 215 ~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
T PRK11102 215 TAGPFVYIELNGVSPQN------FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFW 288 (377)
T ss_pred HcCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3334 445668998888 99999999999999999999999999999999888765444332222 1 22344
Q ss_pred HHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhh-hhhhHHhHHHhhhh
Q 017429 137 MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGG 191 (371)
Q Consensus 137 ~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~i~~ 191 (371)
.+.+.-.+.+.+.+.... ...++.|..| ++|+++.+..+. ...+|..+++.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 289 ALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444444433444343 3566777766 788998888644 34566666666654
No 214
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.4e-08 Score=93.86 Aligned_cols=173 Identities=14% Similarity=0.229 Sum_probs=116.3
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCc---------
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--------- 112 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--------- 112 (371)
++.+++..+........+..+.|.+. +-+|.+-.+ .|++.++..+...+..+++|.++||.-+|
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~------~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk 333 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE------TGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK 333 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence 45677888888888888889999655 568999999 99999999999999999999999988652
Q ss_pred hHHHHHHHHHHHHHHHHHhHHH--H-HHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHh
Q 017429 113 PVIIMGTASVVIFNTLFGLSVN--F-WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (371)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (371)
..-.++....+++.+..++.++ . ..+++.-+..++ .|...+ ...-..|. .+++-+..+|+.+....+.+.++|.
T Consensus 334 ifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~-~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~ 411 (466)
T KOG2532|consen 334 IFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL-SGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPL 411 (466)
T ss_pred HHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH-cccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223444555555555555442 2 122222222222 222222 12222222 4566889999999999999999999
Q ss_pred hhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc
Q 017429 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (371)
Q Consensus 189 i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (371)
+.+.+..... +..|+..|++.+++.++..+.+.+.
T Consensus 412 ~vg~~~~~~t-------------~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 412 LVGIIVTDNT-------------REEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred heeeEeCCCC-------------HHHHHHHHHHHHHHHHHhchheeEe
Confidence 9999985110 4457777788777776665444333
No 215
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.87 E-value=8.1e-09 Score=93.42 Aligned_cols=142 Identities=21% Similarity=0.322 Sum_probs=120.8
Q ss_pred HHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHH
Q 017429 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (371)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 127 (371)
+...+.+...+.+..++--..+|.+..+.- .|........+-++.-++.+++..|+|+-+++..++.+..+=.+
T Consensus 378 ~~av~mG~g~~lv~tFLfWHled~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~ 451 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHLEDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFL 451 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHH
Confidence 334444555555666666667888866666 77767777778888889999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhh-hhhhhhHHhHHHhhhhhhcC
Q 017429 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 128 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~i~~~l~~ 195 (371)
......|+|..+-.-+++|+..+.++.+ .+|++...||+.|..+.++. ....++|-.+|.+|||.+.+
T Consensus 452 ~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 452 YYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred HHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 9999999999999999999998888775 99999999999999999998 55678999999999999998
No 216
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.86 E-value=1.1e-08 Score=95.66 Aligned_cols=156 Identities=10% Similarity=-0.038 Sum_probs=116.3
Q ss_pred HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH----------HHHHHH
Q 017429 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 138 (371)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~ 138 (371)
+.+|.++.+ .|.+.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.+
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 468999998 9999999999999999999999999999999999999988877554311 233344
Q ss_pred HHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchh
Q 017429 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (371)
Q Consensus 139 ~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~ 217 (371)
+..-++.+++.+.... ...++.+..|++.+++..++.++..++|..+++.+++.+.+..+..... . +.-|.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~--~-----~~~~~- 426 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDN--S-----NNLWL- 426 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc--c-----cchHH-
Confidence 5556777887666555 5999999999999999999999999999999999999998843211101 1 11122
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 017429 218 PCLCISLFAFGVTIAAFWLPE 238 (371)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e 238 (371)
...+..+..++.+...+++|+
T Consensus 427 ~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 427 LILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 233344444455555567886
No 217
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.85 E-value=2.5e-07 Score=80.23 Aligned_cols=149 Identities=17% Similarity=0.127 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-CCchHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTA 120 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~ 120 (371)
.-+.+.+..-++....+.....+|.+..|.|+|..+ .|+..+...+.....++....+++|. .+|+..+....
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~------aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~ 282 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE------AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALL 282 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH------hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 345566666677777888889999999999999999 99999999999999999999999976 47777777788
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccc-cchhhhhHhhhhhhhhHHhHHHhhhhhhcCcC
Q 017429 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~ 197 (371)
+..++.+.+.+.+....++- -++.|++.|...+. ..++.+..+. ++-++-.++.+....+=..+||.+.|++-|..
T Consensus 283 ~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 283 LMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 88888877777654433333 48899998887775 8888887664 44445555656655555677999999999953
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.84 E-value=1.5e-07 Score=82.65 Aligned_cols=140 Identities=31% Similarity=0.490 Sum_probs=113.0
Q ss_pred HHHhhcccccchhhHHHHHHhhcccc--ccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHH
Q 017429 50 VLCTALPISSLFPFLYFMIKDFQIAK--REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (371)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 127 (371)
.+.............+.+..+++.+. .. .++..+.+.++..++.++.|.++||+|||+.+..+.....++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 84 (338)
T COG0477 11 ALLLGLDLGLLSPALPLLLSTLSLSSGRLL------YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTL 84 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHH
Confidence 33344556666677777777777665 35 78999999999999999999999999999888888776555556
Q ss_pred HHHhHHH--HHHHHHHHHHHhhhccchhHH-HHHHhhhccc-cchhhhhHhhhh-hhhhHHhHHHhhhhhhcC
Q 017429 128 LFGLSVN--FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 128 ~~~~~~~--~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~i~~~l~~ 195 (371)
...+..+ .+.+++.|+..|++.+...+. .+++.|..|+ ++|+...+.... ...+|..++|.+++.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 85 LLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666555 889999999999988877775 9999999998 678888888877 578888999988888876
No 219
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.82 E-value=2.5e-11 Score=113.40 Aligned_cols=165 Identities=19% Similarity=0.272 Sum_probs=103.9
Q ss_pred ccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH--h--
Q 017429 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L-- 131 (371)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~-- 131 (371)
+......+.+.+.+..+.+... .... ...+...++.+....+.||+|||+.++.+.++.+++.+..+ .
T Consensus 268 g~~~~~~~~~~i~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~ 339 (451)
T PF00083_consen 268 GINFIFYYSPSIFENAGISNSF-----LATL---ILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFL 339 (451)
T ss_pred cccccccccccccccccccccc-----cccc---cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344445556677777766551 0222 22344456667777999999999999999888887776664 1
Q ss_pred -HHH----HHHHHHHHHHHhhh-ccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcc
Q 017429 132 -SVN----FWMAVLTRFLLGSL-NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (371)
Q Consensus 132 -~~~----~~~~~~~r~l~G~~-~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~ 204 (371)
.++ -...++.-.+...+ .....+. ..+.+|.+|.+.|.++.++......++..++|.+...+.+.
T Consensus 340 ~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-------- 411 (451)
T PF00083_consen 340 GVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-------- 411 (451)
T ss_pred ccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence 122 11122222222222 2123444 78889999999999999999888888888888887777662
Q ss_pred cccccccCcc-chhHHHHHHHHHHHHHHHHhhccccccCCC
Q 017429 205 SSESLFGKFP-YFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (371)
Q Consensus 205 g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (371)
.+ +....+..++..+..++..+++||+.++..
T Consensus 412 --------~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 412 --------LGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred --------ccccccchhhHHHHHHHHhheeEEEeeCCCCCH
Confidence 22 222224444444455567888999986543
No 220
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.81 E-value=8.5e-08 Score=88.26 Aligned_cols=141 Identities=12% Similarity=-0.036 Sum_probs=97.5
Q ss_pred HHHHHHHhhcccccchhhHHHHHHhhccc--cccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLYFMIKDFQIA--KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 123 (371)
..+..++...........++.+.++.+.. ... .+...+.+..+..++.++++++.||+++|+++.+..++..
T Consensus 237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~------a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~ 310 (410)
T TIGR00885 237 GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGF------AANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGM 310 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 33344444433334456666666554332 222 3445666667788999999999999999999999988888
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+..++....++... ...-++.|++.+...|. .+...+..+++.+....++... .+|+.+.|.+.|.+.|
T Consensus 311 ~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 311 ALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHH
Confidence 88887777666443 45556677766666675 8888898887765444444332 3999999999999998
No 221
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.80 E-value=1.7e-08 Score=91.44 Aligned_cols=118 Identities=19% Similarity=0.147 Sum_probs=83.8
Q ss_pred ccchhhHHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHh--HH-
Q 017429 58 SSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--SV- 133 (371)
Q Consensus 58 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~- 133 (371)
.......|.+. +.+|.+..+ .++..+...+...++.++.|+++||+|||+.+..+......+..+..+ ..
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVT------AGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP 315 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc
Confidence 34445566554 567888888 898889999999999999999999999998887776666655554443 22
Q ss_pred -HHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhH
Q 017429 134 -NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG 182 (371)
Q Consensus 134 -~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g 182 (371)
+.+.+++...+.+++.|.... ....++|..| ++|+.+.|+.+...++|
T Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 316 LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 455544555555555554434 4677778776 68999999987766655
No 222
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.79 E-value=2.7e-09 Score=94.68 Aligned_cols=195 Identities=14% Similarity=0.021 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccc--hhhhHHHHHH-HHHHHHHHhHHHHhhhhhcCCchHHHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDI--GSYAGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
+.++..+..+|+.-+..+..+.....+.+..++.+.+... -........+ ...+++.+-++...+.|++|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 3444566677777777888888888999988887665111 0001111122 223344566778889999999999999
Q ss_pred HHHHHHHHHHHHHhHHH----HHHHHHHHHHHhh-h-ccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 118 GTASVVIFNTLFGLSVN----FWMAVLTRFLLGS-L-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~----~~~~~~~r~l~G~-~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
+.+++.+..+..+...| -.-+++...+..+ + .|.......+-+|.+|.+.|+..-|+..++.-.|+++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999888887655 1223333333333 2 2333334677889999999999999999999999999988888
Q ss_pred hhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCCC
Q 017429 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDD 246 (371)
Q Consensus 192 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 246 (371)
.+.+.. ++. ..+.+..+++.+.+..+..+..+++||+.++..++
T Consensus 464 ~~t~~~--yp~---------~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~lee 507 (538)
T KOG0252|consen 464 YLTDHN--YPP---------NIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEE 507 (538)
T ss_pred Hhhhcc--CCc---------cccchHHHHHHHHHHHHhHheeEEeecccccCHHH
Confidence 887632 221 33455566888888888888888999988765543
No 223
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.79 E-value=1.4e-07 Score=86.56 Aligned_cols=125 Identities=14% Similarity=0.072 Sum_probs=89.7
Q ss_pred HHHHH-HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHH-HHHHHHHHHHHh--HHHHHHHH
Q 017429 64 LYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT-ASVVIFNTLFGL--SVNFWMAV 139 (371)
Q Consensus 64 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~-~~~~~~~~~~~~--~~~~~~~~ 139 (371)
.+.+. +.+|.+..+ .++......++..+++++.+++.||++++....... ....+....... ..+.+.+.
T Consensus 230 ~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK11652 230 SGVLMGAVLGLSSMT------VSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLL 303 (394)
T ss_pred ChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 34344 448888887 888888888999999999999999998433222222 222222122221 23556677
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+..++.|++.+...+. ..+..|.+| ++++...++.+....+|..+++.+++.+..
T Consensus 304 ~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 304 VPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 7788888888877775 888888886 578999999999999999999999988865
No 224
>PRK11462 putative transporter; Provisional
Probab=98.78 E-value=6.3e-08 Score=90.46 Aligned_cols=112 Identities=14% Similarity=0.186 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhhhccchhHH-HHHHh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~-~~~~~ 160 (371)
.+.+...+.++.+++.+++++++||+|+|+.+..+..+..+..++..+. .+...+++.-++.|++.+...+. .++++
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566778888889999999999999999998876555444433333222 22333444556667766665554 77788
Q ss_pred hhcc-------ccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 161 EIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 161 ~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
|..+ .+..|...+......-+|..+++.++|.+.+
T Consensus 345 d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 345 DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766 2333444566667888899999999988876
No 225
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.75 E-value=3.2e-06 Score=77.95 Aligned_cols=288 Identities=9% Similarity=0.122 Sum_probs=157.5
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhhcccc-----ccccchhhhHHHHHHHHHHHHHH-hHHHHhhhhhcCCch
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAK-----REEDIGSYAGYVGSSFMFGRALT-SVFWGLVADRYGRKP 113 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~Grr~ 113 (371)
.+.++...+..|+....++ .+-.+.+.+.++. +. +.++-+...+...+. .++.+++++|++|++
T Consensus 6 ~~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~------i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~ 75 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEI------IPFLKTWVVVPMAVIFMLIYTKLSNILSKEA 75 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 3455555555555555443 3445556665532 34 777777776666665 889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhH-----H--------------------------HHHHHHHHHHHHhhhccchhH-H-HHHHh
Q 017429 114 VIIMGTASVVIFNTLFGLS-----V--------------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYAC 160 (371)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~-----~--------------------------~~~~~~~~r~l~G~~~~~~~~-~-~~~~~ 160 (371)
++-+....+.....++++. + +.|...+..+...+-+..... . +.+++
T Consensus 76 lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 76 LFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888777666666555543 1 122222333334443333333 5 89999
Q ss_pred hhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccch--hHHHHHHHHHHHHHHHHhhccc
Q 017429 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF--LPCLCISLFAFGVTIAAFWLPE 238 (371)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e 238 (371)
|.++.++-.|-.++.+.+.++|..+++.+..++.+...+.+...+ .++.. ..+.+.+++.++.+....++.+
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~~~~~~~~~~~~~l~~ 229 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVD------GWHVSLKNLMVIVICSGLAIILLYWWVNR 229 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC------hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998887742111100000 11111 1223333333444444444432
Q ss_pred cccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCc
Q 017429 239 TLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL 318 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (371)
.... +++..+. ++ ..+.++.+.......+.++++|.++...+...++...........-......
T Consensus 230 ~~~~---~~~~~~~--~~----~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~------ 294 (472)
T TIGR00769 230 NVLT---DPRSYNP--AL----KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQ------ 294 (472)
T ss_pred cccC---Cccccch--hh----ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 2211 1100000 00 0001111222234566788899887766665555444333322222222221
Q ss_pred cccchh----hhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Q 017429 319 NYSTQM----VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (371)
Q Consensus 319 ~~s~~~----~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~ 359 (371)
.-++.+ .|.+....++..++.+. +.+++.+|+|-+....+
T Consensus 295 ~p~~~~~~~f~g~~~~~~gi~tl~~~l-~~~~l~~~~Gw~~~a~i 338 (472)
T TIGR00769 295 YPSPNEYSAFMGDFSTWTGVVSVTMML-LSGNVIRKYGWLTAALI 338 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHH
Confidence 123322 44555566677766675 44899999987754433
No 226
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.75 E-value=3.3e-07 Score=85.97 Aligned_cols=112 Identities=15% Similarity=0.098 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHHHhHHHH----hhhhh-cCCchHH--HHHHHHHHHHHHHHHh---------HHHHHHHHHHHHHHhh
Q 017429 84 AGYVGSSFMFGRALTSVFWG----LVADR-YGRKPVI--IMGTASVVIFNTLFGL---------SVNFWMAVLTRFLLGS 147 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g----~l~dr-~Grr~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~ 147 (371)
.+++.+...+..++.+++.. ++.|| .+.+... .+|.++.+++.+..++ ..|+++++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 66777777777777777755 44554 3334444 6788888888777664 4689999999999999
Q ss_pred hccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 148 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 148 ~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
|.....|. .+++++..|++.|++.+|++..+..+|..+++.+.....+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999886 9999999999999999999999999999999998887765
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1.2e-07 Score=86.27 Aligned_cols=148 Identities=12% Similarity=0.209 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
.+..+++..++........+....++.+. +|-++.. ..+.......+.+++.+++.++++|+|+|+++.++.+
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~------~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~ 310 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF------AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL 310 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Confidence 34444444445555444444444444322 2333333 5666777777777889999999999999999999999
Q ss_pred HHHHHHHHHHhHH--HHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-------ccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 121 SVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 121 ~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
+.+++.++..+.+ +.+.+++..++.+++.+...+. +++++|..+ .|.-|...+......=+|..++..+.
T Consensus 311 ~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 311 LLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887754 7788888889999998888886 888888764 23335556666667778888888888
Q ss_pred hhhcC
Q 017429 191 GFLAQ 195 (371)
Q Consensus 191 ~~l~~ 195 (371)
|+...
T Consensus 391 g~~L~ 395 (467)
T COG2211 391 GWILG 395 (467)
T ss_pred HHHHH
Confidence 87776
No 228
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.73 E-value=6.2e-06 Score=75.24 Aligned_cols=294 Identities=13% Similarity=0.115 Sum_probs=156.9
Q ss_pred HHHHHHHHHhhcccccchhhHHHHHHhhcc-ccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHH
Q 017429 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQI-AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (371)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 122 (371)
..+....++...+.-+.....+.+..+..- +--. .+...-.-.+..++.++..|.+.||..|.++...+.+.-
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~------~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Q 78 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLP------VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQ 78 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH------HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHH
Confidence 345555566666555555666655555422 2222 334444445667888999999999999999876665433
Q ss_pred HH----HHHHHHh--H--H----HHHHH---HHHHHHHhhhccchhHHH------HHHhhhc--cccchhhhhHhhhhhh
Q 017429 123 VI----FNTLFGL--S--V----NFWMA---VLTRFLLGSLNGLLGPIK------AYACEIF--REEHQALGLSTVSTAW 179 (371)
Q Consensus 123 ~~----~~~~~~~--~--~----~~~~~---~~~r~l~G~~~~~~~~~~------~~~~~~~--~~~~r~~~~~~~~~~~ 179 (371)
-+ ++.+... . . +.+.. ++.-.+.|...-....+. -++..+. +++.+.+..+...-.-
T Consensus 79 n~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRID 158 (432)
T PF06963_consen 79 NLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRID 158 (432)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHH
Confidence 22 2222111 1 1 11222 222222222111111111 1222223 3344455555555555
Q ss_pred hhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHH-Hhhc-------cccccCCCCCCccch
Q 017429 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWL-------PETLHRHNDDDDSCD 251 (371)
Q Consensus 180 ~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~e~~~~~~~~~~~~~ 251 (371)
.+..+++|++.|.+.+ ..+......+.+...++.+.. ++++ |+-..++..++++.+
T Consensus 159 L~ckllaPl~vG~l~t----------------~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~ 222 (432)
T PF06963_consen 159 LFCKLLAPLFVGLLMT----------------FASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESS 222 (432)
T ss_pred HHHHHHHHHHHHHHhh----------------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccc
Confidence 6788999999999987 445555555555555544432 2222 221111111111111
Q ss_pred hhhh------hhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhh
Q 017429 252 VSYD------ALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (371)
Q Consensus 252 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 325 (371)
...+ ......+...+........++..++.+-+...+ ...+..+.-.++......|+.. .|+++...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~-alalLY~TVLsf~~lmt~yl~~------~G~s~~~i 295 (432)
T PF06963_consen 223 SDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASF-ALALLYFTVLSFGGLMTAYLKS------QGYSPSVI 295 (432)
T ss_pred ccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHH-HHHHHHHHHhcCcHHHHHHHHH------CCCCHHHH
Confidence 0000 000000011111122234566667766554444 4444444456677777778877 59999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhc
Q 017429 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHS 367 (371)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~ 367 (371)
|.+-+...+.++.+. ++.+++.+|+|..+.-..+.....++
T Consensus 296 gi~R~~gav~Gl~gT-~~~p~l~~riGlvr~G~~~l~~q~~~ 336 (432)
T PF06963_consen 296 GIFRGLGAVFGLLGT-WVYPWLMKRIGLVRAGLWSLWWQWVC 336 (432)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhcchhhHHHHHHHHHHH
Confidence 999999999999988 58999999999988776666654433
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.67 E-value=7.6e-08 Score=84.18 Aligned_cols=157 Identities=18% Similarity=0.195 Sum_probs=115.0
Q ss_pred HhhcccccchhhHHH-HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC--CchHHHHHHHHHHHHHHH
Q 017429 52 CTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTL 128 (371)
Q Consensus 52 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~ 128 (371)
...+...+.-|.++. +.+.+..+.-+ .|+..--..+.+.++..+.|.++||++ |...-..+.+..++.+..
T Consensus 281 ~~n~~lafLePtlslwm~e~m~~p~w~------~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~ 354 (464)
T KOG3764|consen 281 FSNSSLAFLEPTLSLWMLETMFTPGWE------VGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGP 354 (464)
T ss_pred hccchHHHhCcccHHHHHHhccCCCcc------eeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhch
Confidence 344455566677765 55666655546 787777788899999999999999999 544445566666777778
Q ss_pred HHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhc---ccc---chhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCC
Q 017429 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF---REE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (371)
Q Consensus 129 ~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~---~~~---~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~ 201 (371)
..+++++.++++-++..+++.+..... ...+.++. ..+ ..|...++...++.+|..+||.++|.+.+
T Consensus 355 iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~------ 428 (464)
T KOG3764|consen 355 IPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE------ 428 (464)
T ss_pred hHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee------
Confidence 888999999999998888876665443 44444443 333 45788899999999999999999999998
Q ss_pred CcccccccccCccchhHHHHHHHHHHHHH
Q 017429 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT 230 (371)
Q Consensus 202 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (371)
.+++.+...+.++..++-.
T Consensus 429 ----------~iGF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 429 ----------AIGFEWLMTIIGILNLIYA 447 (464)
T ss_pred ----------ehhHHHHHHHHHHHHHHHH
Confidence 6666666566665555543
No 230
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.65 E-value=9.6e-07 Score=83.87 Aligned_cols=181 Identities=13% Similarity=0.115 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
.+..+.+..+.+..+......+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAG 368 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHH
Confidence 333555666666677777788888888888876542 2334445556667777779999999999999999999
Q ss_pred HHHHHHHHHhHHHH-----------HHHHH---HHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHH
Q 017429 122 VVIFNTLFGLSVNF-----------WMAVL---TRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (371)
Q Consensus 122 ~~~~~~~~~~~~~~-----------~~~~~---~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (371)
+.++.++.+..... ..+.+ .-++..+..+.....+.+.+|.+|.+.|+++.++......+...+-.
T Consensus 369 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~ 448 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS 448 (513)
T ss_pred HHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH
Confidence 99998877753211 11111 11222333333333478999999999999999887665555444333
Q ss_pred hhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHH-HHHhhccccccCCC
Q 017429 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHN 244 (371)
Q Consensus 188 ~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ 244 (371)
.....+... .++ + ...+.+.+++.+... ...+++||+..+..
T Consensus 449 ~~~~~~~~~-------~~~-------~-~~f~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 449 FFFPFITEA-------LGI-------G-GTFGYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred HHHHHHHHh-------ccc-------c-chHHHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 333333320 000 1 111234444444444 57788999876543
No 231
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.64 E-value=6.7e-07 Score=78.74 Aligned_cols=147 Identities=16% Similarity=0.127 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
.+.+..-.++.|+...........++.+..+ .|.++.+ .+...+.+..+.++|..++-++..|+...|++.+.
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~------aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~ 308 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ------AAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFY 308 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3445556666777777777778888877777 7888888 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.++..+.++..+++++...++. -++.|+..+...|. .+...+..|+ .....+..-....+|+++-|.+.|++.|
T Consensus 309 a~~~ill~~~~~l~~g~v~~~~-l~~ig~F~simfPTIfslal~~l~~--~ts~~s~~l~maivGGAiiP~l~G~i~d 383 (422)
T COG0738 309 ALIAILLLLAVALIGGVVALYA-LFLIGLFNSIMFPTIFSLALKNLGE--HTSVGSGLLVMAIVGGAIIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHHHHHhcChHHHHH-HHHHHHHhHHHHHHHHHHHHhccCc--cccccceeeeeheecchHHHHHHHHHHH
Confidence 9888888888888888655443 46678877777775 8988888883 2334444455667899999999999999
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.63 E-value=1.1e-06 Score=68.25 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc
Q 017429 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~ 166 (371)
.++......+++++.+.+.+++|.|+.++++.++..+..... +-++.+.++.+-++.|++.+..++. ..++.+..+++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 455666677888999999999999999999999988766554 3556788899999999999999997 89999999999
Q ss_pred chhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 167 HQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.|++..+++......+.++|.++.-++.
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888888888877765554
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.62 E-value=1.3e-06 Score=77.61 Aligned_cols=170 Identities=18% Similarity=0.132 Sum_probs=128.1
Q ss_pred hhcccccchhhH-HHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh-hcCCchHHHHHHHHHHHHHHHHH
Q 017429 53 TALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLFG 130 (371)
Q Consensus 53 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~ 130 (371)
..++..+.-.++ |+=.+-||++..+ ...++.....|..++....|++.. |.++++.-.+++.+..++..+..
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII 293 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 344444455556 4445779999999 889999999999999999998887 67788888888888877766544
Q ss_pred h---HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccc
Q 017429 131 L---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (371)
Q Consensus 131 ~---~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~ 206 (371)
+ ..+.+.+...-++.|++.|.+.+. .+.+.|+..+++.|..+|.+.....++..+|..++|.+.|........
T Consensus 294 ~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~--- 370 (403)
T PF03209_consen 294 LAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN--- 370 (403)
T ss_pred HHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---
Confidence 4 457888889999999999999886 889999999999999999999999999999999999988743211100
Q ss_pred cccccCccchhHHHHHHHHHHHHHHHHh
Q 017429 207 ESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (371)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (371)
+ ...+|...|.+.++..++++....
T Consensus 371 ~---~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 371 S---PALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred C---cchHHHHHHHHHHHHHHHHHHHHH
Confidence 0 033455666666666555554443
No 234
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.59 E-value=1.8e-07 Score=63.78 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=73.4
Q ss_pred hhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH
Q 017429 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (371)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (371)
.++++..+.|.+|.+.+|.++|.++ .|++.++..+|+.+|.+...++.++..+++.+..+.+...+..+.+++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556677899999999999999999 9999999999999999999999999888999999999999999999998
Q ss_pred HHHHHH
Q 017429 133 VNFWMA 138 (371)
Q Consensus 133 ~~~~~~ 138 (371)
++++.+
T Consensus 78 ~~~~~w 83 (85)
T PF06779_consen 78 HSFWLW 83 (85)
T ss_pred hchHHH
Confidence 887654
No 235
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.58 E-value=2.9e-06 Score=77.38 Aligned_cols=107 Identities=19% Similarity=0.114 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc
Q 017429 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~ 166 (371)
.++......+++++.+.+.|+.|.|+.++++..+.....+.+.+. |-+-++....+.|+|.+..+.. ..+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 677778888999999999999999999999999998887776654 4567788999999999998886 89999999999
Q ss_pred chhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.+.+..++.......+.++|..+...+..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~ 163 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQ 163 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeE
Confidence 99999999888888888877666555543
No 236
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.54 E-value=2.4e-06 Score=80.79 Aligned_cols=108 Identities=8% Similarity=-0.041 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHHHHhHHH----HhhhhhcCCchHHHHHHHHHHHHHHHHHhHHH---------HHHHHHHHHHHhhhcc
Q 017429 84 AGYVGSSFMFGRALTSVFW----GLVADRYGRKPVIIMGTASVVIFNTLFGLSVN---------FWMAVLTRFLLGSLNG 150 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~----g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~~ 150 (371)
.+++.++..+...+..++. +++.||++..+.+.+|.++.+++.+..+...+ .++++..+++.|++++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4566666665555555555 66777777778889999999999888777655 4678899999999999
Q ss_pred chhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 151 ~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
...|. ..++.+..|++.|++.+|.+..+..+|..++..+.+
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99997 999999999999999999888777777777666654
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.52 E-value=4.6e-06 Score=77.36 Aligned_cols=185 Identities=15% Similarity=0.006 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHH-HH-hhcccccccc---ch-hhhHHHHHHHHHHHHHHhHHHHhhhhhcCC-chH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFM-IK-DFQIAKREED---IG-SYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPV 114 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~ 114 (371)
.+..+++..++..++...+..+.+++ .+ .|+-++.+++ .+ ..-.+....+.+...+.+++.-++.+|+|+ |++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 34456666776666655444444433 32 3443332211 01 112344444555556777888899999994 777
Q ss_pred HHHHHHHHHHHHHHHHhHHH---------------------HHHHHHHHHHHhhhccchhHH-HHHHhhhccc--cchhh
Q 017429 115 IIMGTASVVIFNTLFGLSVN---------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE--EHQAL 170 (371)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~--~~r~~ 170 (371)
..++.++.+++.....+.++ .+..++...+.|+..+..... ++++++..++ ++.|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 79998888888877775443 266777788899988887776 9999999985 45599
Q ss_pred hhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHH-HHHhhccccc
Q 017429 171 GLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETL 240 (371)
Q Consensus 171 ~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~ 240 (371)
.+|+.+.+..+.+++..+..|.+.+..++ +-...+.+.++..+++. ...+.+|+++
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~~~g~--------------~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------------GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------------CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999888885552221 12233456666666554 4566677654
No 238
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.51 E-value=1.9e-06 Score=79.56 Aligned_cols=147 Identities=8% Similarity=-0.016 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHH-hhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 120 (371)
.++...+..++............|.+.+ .+|.+..+ .++.......+..+++.+.+++.++.++++.+.....
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 292 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ------FAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVP 292 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHH
Confidence 3333333333333333344445575554 56889888 8888877888888888888887755555444333322
Q ss_pred HHHHHHHHHH-----hHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 121 SVVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 121 ~~~~~~~~~~-----~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
+..++.++.. ..++++..++..++.++|.+...+. .. .+..-....+|++.++.+.....+...++..++++.
T Consensus 293 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~-~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~ 371 (413)
T PRK15403 293 IQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFR-FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLW 371 (413)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHH-HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223322222 1233434566777788887776664 32 222222334788888888888888888888888886
Q ss_pred C
Q 017429 195 Q 195 (371)
Q Consensus 195 ~ 195 (371)
.
T Consensus 372 ~ 372 (413)
T PRK15403 372 F 372 (413)
T ss_pred H
Confidence 5
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.47 E-value=5.4e-07 Score=61.05 Aligned_cols=70 Identities=23% Similarity=0.529 Sum_probs=60.2
Q ss_pred HHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
+-...++.....+...|++|.+.++.|++..+ +|.+.++..+...++++++|.++||+++++.++....+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33455666677788889999999999999999 99999999999999999999999999998887766544
No 240
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.41 E-value=4.6e-06 Score=78.48 Aligned_cols=111 Identities=12% Similarity=0.069 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchH-------HHHHHHHHHHHHHHHH-----h-----HHHHHHHHHHHHHHh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPV-------IIMGTASVVIFNTLFG-----L-----SVNFWMAVLTRFLLG 146 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-------l~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~r~l~G 146 (371)
.+++.+...+..++.+++.+++.||.|+|+. +.+|.++.+++.+..+ . ..++++++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4556666667777889999999999999874 6777777766654321 1 135777888899999
Q ss_pred hhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
+|.+...+. ..++.+..|++.++.++|++....++|+.+|..++....
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~ 439 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTA 439 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998886 999999999999999999999999999999988887663
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.31 E-value=1.6e-06 Score=80.56 Aligned_cols=142 Identities=13% Similarity=0.075 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHHHh-hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh----cCCchHHH
Q 017429 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVII 116 (371)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~l~ 116 (371)
.++...++.++.....+.....+|.+.++ .|.+..+ .+.+...+.++.+++.+++|.++|| ..+|....
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~------a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~ 347 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ------ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFI 347 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH------hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34556677778888888889999988888 5588888 8899999999999999999999999 66666666
Q ss_pred HHHHHHHHHH-HHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchh-hhhHhhhhhhhhHHhHHHhh
Q 017429 117 MGTASVVIFN-TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQA-LGLSTVSTAWGIGLIIGPAL 189 (371)
Q Consensus 117 ~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~-~~~~~~~~~~~~g~~~g~~i 189 (371)
....+..+.. +......+.......-+....+.....++ ....++...++.|. ...+....+.+.++.++|.+
T Consensus 348 ~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~ 423 (495)
T KOG2533|consen 348 VFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL 423 (495)
T ss_pred HHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh
Confidence 6655554433 44333332332222222222334444443 66777766554443 44444444444444444333
No 242
>PTZ00207 hypothetical protein; Provisional
Probab=98.30 E-value=1.1e-05 Score=76.51 Aligned_cols=185 Identities=11% Similarity=0.065 Sum_probs=123.6
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHHHhh-ccccccccchhhhHH-HHHHHHHHHHHHhHHHHhhhhhcCC------
Q 017429 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGR------ 111 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~Gr------ 111 (371)
..++|.+++..++.......+...+.++.+.+ |.+.+++ ... +.+...++..+|.+..|.+....-+
T Consensus 352 ~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~-----~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r 426 (591)
T PTZ00207 352 TARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDA-----LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDR 426 (591)
T ss_pred chhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCcc-----ceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccc
Confidence 45567777777777766666666677888888 6522221 122 6677777888888888877622111
Q ss_pred --chH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHH-
Q 017429 112 --KPV-IIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG- 186 (371)
Q Consensus 112 --r~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g- 186 (371)
|+. +.+..+ +.++.+++++......+++..++.|++.|...++ ...++|+|. ++-|+-..+......+|..+-
T Consensus 427 ~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n 504 (591)
T PTZ00207 427 VPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLN 504 (591)
T ss_pred cchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHH
Confidence 122 233333 5566666665544368999999999999998886 999999999 888888888777777877664
Q ss_pred HhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHh
Q 017429 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (371)
Q Consensus 187 ~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (371)
-.+.|.+.|.--.. .+-....++..++.++++.+..++...+...
T Consensus 505 ~~l~G~~Yd~ea~k---~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 505 RLLYGEWYTQQADK---LGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHHHhh---CCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 55677776632110 1222444577789999998888877666543
No 243
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.26 E-value=1.8e-05 Score=69.16 Aligned_cols=143 Identities=13% Similarity=0.227 Sum_probs=89.5
Q ss_pred CChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh-----hcCCc
Q 017429 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRK 112 (371)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~Grr 112 (371)
..++.++.+....+++++..+... .+|.+.+.-|+|.++ .+....++. -..--+.+.++.| |+|||
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~------~a~fS~ay~--P~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS------QAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh------hhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccc
Confidence 345667778888899999999888 899999988888877 554433322 1234568889999 99999
Q ss_pred hHHHH-HHHHHHHHHHHHHhH-----------HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhh
Q 017429 113 PVIIM-GTASVVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAW 179 (371)
Q Consensus 113 ~~l~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~ 179 (371)
|.-++ +..+.+..+...+.. ++...+....++.-+..+....+ -.+.-.+..+++-|-+......+.
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~ 178 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQ 178 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHH
Confidence 87655 334444444444331 23333333445555555555553 666666777777666655555555
Q ss_pred hhHHhHHHhh
Q 017429 180 GIGLIIGPAL 189 (371)
Q Consensus 180 ~~g~~~g~~i 189 (371)
+.|.+++..+
T Consensus 179 ~~GyfL~~~i 188 (510)
T KOG3574|consen 179 TAGYFLGNVV 188 (510)
T ss_pred hhhHHhhcce
Confidence 5555555444
No 244
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.16 E-value=0.0001 Score=70.36 Aligned_cols=143 Identities=19% Similarity=0.105 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHHhhhccc-hhHHHHHHh
Q 017429 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM---AVLTRFLLGSLNGL-LGPIKAYAC 160 (371)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~r~l~G~~~~~-~~~~~~~~~ 160 (371)
.+................+...|++|||.....+.++..++.++.++..+... ..+...+..++.+. ......+.+
T Consensus 353 ~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (521)
T KOG0255|consen 353 YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSA 432 (521)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444455666667789999999999999999999999999888654433 33333333334333 344599999
Q ss_pred hhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHH-HHHHHHHHHHHHhhcccc
Q 017429 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLC-ISLFAFGVTIAAFWLPET 239 (371)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~ 239 (371)
|.+|...|..+.+.......+|.+++|.+....... . ....+.. .....+...+..+++||+
T Consensus 433 el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~---------------~--~~~~~~~~~~~~~l~~~~~~~~lpet 495 (521)
T KOG0255|consen 433 ELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM---------------F--PLLGLILFGWLALLLGLLSLLLLPET 495 (521)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------c--ccchHHHHHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999999999987655431 0 1111122 233333344556899999
Q ss_pred ccCCC
Q 017429 240 LHRHN 244 (371)
Q Consensus 240 ~~~~~ 244 (371)
.....
T Consensus 496 ~~~~l 500 (521)
T KOG0255|consen 496 KGKPL 500 (521)
T ss_pred CCCCC
Confidence 87655
No 245
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.09 E-value=0.00037 Score=62.76 Aligned_cols=135 Identities=17% Similarity=0.103 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~ 162 (371)
.+.+.-+-.+...+..+.+.++.+|+..+.=+.+..++..++.++.+++++.+.-+++-.+.+++.|..... ..+ +..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THF 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHh
Confidence 445666666777888888889999988655556667788888888899999988888888888888777665 444 446
Q ss_pred ccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHH-Hhhccc
Q 017429 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (371)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (371)
+++ ..++-++.+.+.++++|+..-..+.+ . ..+.+..++....+.++..+. ++.+|.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~--------------g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-L--------------GLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-h--------------CcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 654 35677888888888888877665554 1 344555556666555544444 334443
No 246
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.09 E-value=4.8e-06 Score=69.19 Aligned_cols=107 Identities=17% Similarity=0.125 Sum_probs=80.9
Q ss_pred HHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH
Q 017429 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (371)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (371)
.+...+.....|+..++.++++..+.+ +|.+..+.+-..++...+.|.++||-|||+.-+.-++.+.++++ .-
T Consensus 47 slmmAgDWLQgPYvYyLYstYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TK 119 (454)
T KOG4332|consen 47 SLMMAGDWLQGPYVYYLYSTYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TK 119 (454)
T ss_pred HHHHhhhhhcCceeeeeehhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hh
Confidence 334445566678887888899999999 88877777777788899999999999999986665555554443 23
Q ss_pred hHHHHHHHHHHHHHHhhhccchhHH--HHHHhhhcc
Q 017429 131 LSVNFWMAVLTRFLLGSLNGLLGPI--KAYACEIFR 164 (371)
Q Consensus 131 ~~~~~~~~~~~r~l~G~~~~~~~~~--~~~~~~~~~ 164 (371)
.++++-.++++|.+-|+..+....+ .-+++|...
T Consensus 120 hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 120 HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 4678889999999999987776554 557777653
No 247
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=6.5e-05 Score=69.49 Aligned_cols=124 Identities=20% Similarity=0.281 Sum_probs=107.3
Q ss_pred HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHH-hhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 017429 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG-LVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFL 144 (371)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 144 (371)
+....+++++.+ .+...+.......+++.+.. .+...+|-|+++..|++.-.+...+.+++++.|+++....+
T Consensus 267 yl~~~f~w~~~~------~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 267 YLKAKFGWNKKE------FSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV 340 (463)
T ss_pred EEeeecCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH
Confidence 345678999988 88888888888888888777 77888898999999999999999999999999999999888
Q ss_pred HhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 145 LGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 145 ~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.++.........+.++-+..++++|+++++.....++...++|.+-+.+..
T Consensus 341 ~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 341 VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 887665555569999999999999999999999999999999998887754
No 248
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.03 E-value=7.3e-05 Score=70.87 Aligned_cols=195 Identities=18% Similarity=0.159 Sum_probs=123.8
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHH-hhccccc---cccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC-chHH
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKR---EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVI 115 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l 115 (371)
|.+....+..++.++.+.....+.|.... -++-+.. . .++......++..+++.+.|.+.-+++| |+.+
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~------~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~l 383 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITE------IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQL 383 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccce------eehhhhhHHHHHHHHHHHHHHHHHHccchhHHH
Confidence 34444445556666655555556664433 3444332 3 6777788888889999999999999887 5666
Q ss_pred HHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhh
Q 017429 116 IMGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (371)
Q Consensus 116 ~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~ 192 (371)
+++.++..+++-+++. .+|....+..-++.|++.|..... .....-..|+++-+.+.++..+.-.+|+.+|..+..-
T Consensus 384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6776666655444443 345555667778888887776554 5555556788889999999888888887776665433
Q ss_pred hcCc-------------------------------CCC-------CCCcc---------cccccccCccchhHHHHHHHH
Q 017429 193 LAQP-------------------------------AEK-------YPNLF---------SSESLFGKFPYFLPCLCISLF 225 (371)
Q Consensus 193 l~~~-------------------------------~~~-------~~~~~---------g~~~~~~~~~~~~~~~~~~~~ 225 (371)
+... ..+ .|... ..+..+ ..+++..++.....
T Consensus 464 I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aY-a~ay~~V~~~siaF 542 (599)
T PF06609_consen 464 IFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAY-AHAYRYVYYSSIAF 542 (599)
T ss_pred HHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 2210 000 00000 011223 44577778888888
Q ss_pred HHHHHHHHhhccccccC
Q 017429 226 AFGVTIAAFWLPETLHR 242 (371)
Q Consensus 226 ~~~~~~~~~~~~e~~~~ 242 (371)
+.++++..+++++..+.
T Consensus 543 G~vaiiaa~fl~d~~~~ 559 (599)
T PF06609_consen 543 GVVAIIAALFLGDIDKY 559 (599)
T ss_pred HHHHHHHHHHcCChHHh
Confidence 88888999999876543
No 249
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.97 E-value=0.00072 Score=62.99 Aligned_cols=246 Identities=15% Similarity=0.156 Sum_probs=127.8
Q ss_pred HHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhH---------H----------------------HHHHHHHHH
Q 017429 94 GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---------V----------------------NFWMAVLTR 142 (371)
Q Consensus 94 ~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~----------------------~~~~~~~~r 142 (371)
...+...+..+++++++|.+++-+....+.....++++. + +.|...+..
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 345567788999999999998877666665555554431 0 112222233
Q ss_pred HHHhhhccc-hhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC-cCCCCCCcccccccccCccchhHH
Q 017429 143 FLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYPNLFSSESLFGKFPYFLPC 219 (371)
Q Consensus 143 ~l~G~~~~~-~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~-~~~~~~~~~g~~~~~~~~~~~~~~ 219 (371)
+..-+-+.. .+.. +.+.+|.++.++-.+..+++..+.++|.+++..+...+.+ .....+ . +...|....
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~----~----~~~~~~~~l 222 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLP----A----GVDAWELSL 222 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc----c----ccccHhHHH
Confidence 333332223 3334 8899999999999999999999999999988888877765 111000 0 011122211
Q ss_pred ----HHHHHHHHHHHHHHhhccccccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHH
Q 017429 220 ----LCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFS 295 (371)
Q Consensus 220 ----~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (371)
....+.+++.+....++.+.........+ +. ..++.++.+.......+.++++|.+....+...++.
T Consensus 223 ~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~--~~-------~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Yg 293 (491)
T PF03219_consen 223 NSLMGIVLILGIVIILLYRYMNKNVLTDPRFYP--SA-------KKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYG 293 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCccccch--hh-------hcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 11222222223333333322111000000 00 000001111222345667788888877766666555
Q ss_pred hhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Q 017429 296 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (371)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~ 359 (371)
....-.....-......+... ..++ .-.|-.....++..++.. ++++.+.+|+|-+....+
T Consensus 294 i~inLvE~~wK~~lk~~~~~~-~~ys-afmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 294 ISINLVEVVWKSQLKQLYPDP-NDYS-AFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALI 354 (491)
T ss_pred HHHHHHHHHHHHHHHHHCCCc-hHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHH
Confidence 444333333222222221100 1111 224555666777777777 578888999887765544
No 250
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.85 E-value=0.0034 Score=57.28 Aligned_cols=293 Identities=12% Similarity=0.116 Sum_probs=152.8
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHH-HHHHHhHHHHhhhhhcCCchHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIM 117 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~l~~ 117 (371)
.+++++.+.+..++..+.+ ..+-.+.+.+.++... ...+.++=+..-+ +.++..++.+++.++..|.+++-.
T Consensus 25 E~~kflpl~Ll~f~I~~ny----~~lR~lKDslvv~~~g---ae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~ 97 (509)
T COG3202 25 ELKKFLPLALLFFCILFNY----NLLRSLKDSLVVTRQG---AESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHhhhheEeecCc---chhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 3455555555555554443 4445566666665322 1115555555555 567788899999999999999887
Q ss_pred HHHHHHHHHHHHHhHH---------H-----------H------------HHHHHHHHHHhhhccchhH-H-HHHHhhhc
Q 017429 118 GTASVVIFNTLFGLSV---------N-----------F------------WMAVLTRFLLGSLNGLLGP-I-KAYACEIF 163 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~---------~-----------~------------~~~~~~r~l~G~~~~~~~~-~-~~~~~~~~ 163 (371)
-+..+....+++++.- + + |...+...+.=+-...+.. . +....|++
T Consensus 98 ~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 98 ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777776666666520 1 1 2222222222222223333 4 78899999
Q ss_pred cccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccc----c
Q 017429 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE----T 239 (371)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----~ 239 (371)
..++-.|-.++++.+.+++..++..+..++...........- ....+..+.+.+..+++++....++.+ +
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~------~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~ 251 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFK------DLLLQILFIVIVILGIIAILLYRYINRNVLTD 251 (509)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999999998888888762211000000 001233334444444444444444322 1
Q ss_pred ccCCCCCCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCcc
Q 017429 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (371)
+....+..+. ++.++.+..-....+.+.++|.++...+...++.....-.....-.-....+.. .+
T Consensus 252 ~~f~~~~~~k------------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~--~~ 317 (509)
T COG3202 252 PLFYLRAKKK------------KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPT--TN 317 (509)
T ss_pred cchhHHHhcc------------cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCC--hh
Confidence 1110000000 000000111223456677888877766665555544332222111111111000 01
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Q 017429 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (371)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~ 358 (371)
--..-.|......++...+.....++-+.+|.|-....+
T Consensus 318 ~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~Al 356 (509)
T COG3202 318 EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGAL 356 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHH
Confidence 011224444566666656666678888888888654433
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.82 E-value=0.00014 Score=63.92 Aligned_cols=121 Identities=14% Similarity=0.069 Sum_probs=104.0
Q ss_pred HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC--CchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 017429 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (371)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 146 (371)
+.+|.+..+ .|-+.+...+...+.+....+..||.. -+-.+..++.+..-..++...++....+.++..+-.
T Consensus 290 ~rfg~ss~~------~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 290 GRFGYSSMQ------QGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKS 363 (451)
T ss_pred CccCCChhh------heeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHH
Confidence 678999888 888888888888888888889999887 677777777777777777777888888888888888
Q ss_pred hhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+..+...++ ..++....|.++||..+|+..+..+++-++||+++|.+..
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 877776665 8889999999999999999999999999999999988765
No 252
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.75 E-value=0.00035 Score=47.29 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhh
Q 017429 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNF 364 (371)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~ 364 (371)
..-..++++.........+++.|..+ .|+++.++|.+.++..+..+++. ++.+.+.||.++++.+......+
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~------~Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ------LGLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHHH
Confidence 34455666666666777777777765 69999999999999999999998 58899999999998887665543
No 253
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.56 E-value=0.0033 Score=58.91 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCC--chH-----HHHHHHHHHHHHHHHHhH---------HHHHHHHHHHHHHhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGR--KPV-----IIMGTASVVIFNTLFGLS---------VNFWMAVLTRFLLGS 147 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Gr--r~~-----l~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~l~G~ 147 (371)
.++..++..+..++.+|+.+++=.|.+| |.. +.+|+++.+++.+.+.++ .+.+++++..+++++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 6788888888888888887777566532 211 567777777777666432 367888999999999
Q ss_pred hccchhHH-HHHHhhhccccchhhhhHhhhhh-hhhHHhHHHhhhhhhc
Q 017429 148 LNGLLGPI-KAYACEIFREEHQALGLSTVSTA-WGIGLIIGPALGGFLA 194 (371)
Q Consensus 148 ~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~i~~~l~ 194 (371)
|+-+..|+ .+.+++..|++.|+..+|.+... ..+|..++..+++...
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~ 438 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTS 438 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999997 99999999999999999998663 3567766666666553
No 254
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.51 E-value=0.00059 Score=62.10 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc---chhhhhHhhhhhh
Q 017429 113 PVIIMGTASVVIFNTLFGLSV---------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAW 179 (371)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~---~r~~~~~~~~~~~ 179 (371)
|.++++.++..+|.++..++. +...++++..+.++|.|..-+. .++.+|.++++ +|.+.+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888855432 2357888888999999998885 99999999865 4667788889999
Q ss_pred hhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc
Q 017429 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (371)
Q Consensus 180 ~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (371)
++|..+++.+.+++.+ +++|...|.+.++..+++++..+.-
T Consensus 82 n~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999987 7778888888777776666655443
No 255
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.41 E-value=0.0051 Score=56.37 Aligned_cols=279 Identities=14% Similarity=0.131 Sum_probs=129.5
Q ss_pred HHHHHHHHHhhcccccchhhHHHHHHh--hccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhh-----hcCCchHHH
Q 017429 44 FSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRKPVII 116 (371)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~Grr~~l~ 116 (371)
..+.+..+++++..+.....+|.+.++ -+.|.++ .+...-+.. .+ -.-+++.++.| |+||||..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q------~~~fSla~~-Pf-SlKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQ------QAIFSLASY-PF-SLKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhH------heeeeeeec-hh-HHHHhhhhhhhhhcccccCCcchhh
Confidence 356677888999988877788988888 7888877 443322210 10 12345555555 899998866
Q ss_pred HH-HHHHHHHHHHHHhHH------------------------HHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhh
Q 017429 117 MG-TASVVIFNTLFGLSV------------------------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQAL 170 (371)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~------------------------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~ 170 (371)
+- ..+.++..+..+... +...+....++.-+..+.... +-.+.-.+..+++++.
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ 154 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGY 154 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcch
Confidence 54 344444444333221 011122222233333333333 2344444556677766
Q ss_pred hhHhhhhhhhhHHhHHHhhhhhhcCcC--C----CCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCC
Q 017429 171 GLSTVSTAWGIGLIIGPALGGFLAQPA--E----KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (371)
Q Consensus 171 ~~~~~~~~~~~g~~~g~~i~~~l~~~~--~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (371)
+..-...+.++|..++..+--.+.+.. . +.|...|. . ..+-..- ....+..++.+.+.++-+|.+..+.
T Consensus 155 ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~gl---v-tl~~yl~-fwg~~~l~~T~~v~~~k~E~~~~~~ 229 (544)
T PF13000_consen 155 ASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGL---V-TLSGYLK-FWGWVFLIVTILVAFFKKEKPHSES 229 (544)
T ss_pred HHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCe---e-eHHHHHH-HHHHHHHHHHHHHheEeeccccccc
Confidence 655555555555555544433333210 0 01111111 1 0000011 1112222223344455556543221
Q ss_pred CCC-cc---chhhhhhh--hhhhhh--hhhhcccCC---ccccccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCC
Q 017429 245 DDD-DS---CDVSYDAL--ESASAE--VKEEEGREA---TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK 313 (371)
Q Consensus 245 ~~~-~~---~~~~~~~~--~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (371)
..+ +. .+...++. +....+ ..++..... +...+++|-|++...++.....-....+.......=+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-- 307 (544)
T PF13000_consen 230 LPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-- 307 (544)
T ss_pred CccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH--
Confidence 111 10 00000000 000000 011111111 223456677888887777777766666665555544433
Q ss_pred ccCCccccchhhhHHHHHHHHHHHHHHH
Q 017429 314 KLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (371)
Q Consensus 314 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 341 (371)
.|++....+.+..+..=..++...
T Consensus 308 ----kG~~KE~LAl~~li~~P~qii~~~ 331 (544)
T PF13000_consen 308 ----KGLSKEDLALLVLIDFPFQIILPY 331 (544)
T ss_pred ----cCCCHHHhHHHHHHhhhHHHHHHH
Confidence 789888887765554444444443
No 256
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.37 E-value=0.00083 Score=58.31 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=96.8
Q ss_pred HHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhH
Q 017429 94 GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLS 173 (371)
Q Consensus 94 ~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~ 173 (371)
.+.+.-.+.=.+.|-...|++++.-.+.......+..+.++.+.+-+.-+..|...+.-..-++++-+..+++++.++.+
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~ 133 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTG 133 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHH
Confidence 34455555667899999999998887777777788888889888888888877765554444888888999999999999
Q ss_pred hhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhcccccc
Q 017429 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (371)
Q Consensus 174 ~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (371)
...++.-.|-..|..++-.+.... ...+...-.+......++.+..+++|..++
T Consensus 134 y~RaA~L~g~~~g~vlaQlLvs~~--------------~~sy~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 134 YCRAAFLVGKFVGSVLAQLLVSLE--------------TLSYTTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred HhHHHHHHHhHHHhHHHHHHhhhc--------------ccchhhhchhhHHHHHHHHHHHhhCCCCch
Confidence 998888888888888888877521 222222223444444455666777776653
No 257
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.35 E-value=0.0047 Score=55.81 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHH--HHHHHHH---HHHhHHHHHHHHHHHHHHhhhccchhH-HHH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA--SVVIFNT---LFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~--~~~~~~~---~~~~~~~~~~~~~~r~l~G~~~~~~~~-~~~ 157 (371)
.-+....|.+|-+++.--...+ |+ |+..+.+.+ +..+..+ ..-+.++.|..++.-+..|+.+|...+ ...
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 6677777887766664432221 34 333333322 2222222 223457888888888999998888777 577
Q ss_pred HHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 158 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.+.|-.++++|-.+++....+-++|..++.+++-.+-
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7788889999999999999999999999888876553
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.30 E-value=0.00021 Score=64.20 Aligned_cols=122 Identities=17% Similarity=0.088 Sum_probs=79.0
Q ss_pred HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC-chHHHHHHHHHHHHHHHHH-hH---HHHHHHHHHHH
Q 017429 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVVIFNTLFG-LS---VNFWMAVLTRF 143 (371)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~r~ 143 (371)
..-|.+... .|++.....++.++++...|.+.||.+. |..+++......++..... .. ...+.++..-.
T Consensus 294 ~~sgY~~~~------aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~ 367 (480)
T KOG2563|consen 294 CPSGYEGVF------AGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCG 367 (480)
T ss_pred ccccCCccc------cchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHH
Confidence 344555555 8999999999999999999999999874 5555555555555532222 11 12344555556
Q ss_pred HHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 144 l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
+.|++.....|. ..+-.|..-|..-+...|+.+....+=+++-..+-+.+.+.
T Consensus 368 ~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~ 421 (480)
T KOG2563|consen 368 LLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAED 421 (480)
T ss_pred HHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhc
Confidence 677766666665 77777765444455567777666555555556666666663
No 259
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.0021 Score=58.14 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcC----CchHHHHHHHHHHHH---HHH----HH-hHHHHHHHHHHHHHHhhhccc
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYG----RKPVIIMGTASVVIF---NTL----FG-LSVNFWMAVLTRFLLGSLNGL 151 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~G----rr~~l~~~~~~~~~~---~~~----~~-~~~~~~~~~~~r~l~G~~~~~ 151 (371)
..++..+...+..+|.+++|.++||+- +-....+..+..+.+ .+. .. .+.+...+....++.|.....
T Consensus 285 ~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~ 364 (493)
T KOG1330|consen 285 TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISW 364 (493)
T ss_pred chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 556677778888999999999999843 212222222222221 111 11 123333444445556654333
Q ss_pred -hhHH-HHHHhhhccccchhhhhHhhhhh-hhhHHhHHHhhhhhhcCcCCC
Q 017429 152 -LGPI-KAYACEIFREEHQALGLSTVSTA-WGIGLIIGPALGGFLAQPAEK 199 (371)
Q Consensus 152 -~~~~-~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~i~~~l~~~~~~ 199 (371)
.... ..+..|+.|+++|..+.++-... ..+|..-+|.+-|.+.+...+
T Consensus 365 ~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g 415 (493)
T KOG1330|consen 365 FNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRG 415 (493)
T ss_pred cccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhC
Confidence 2333 66788899999999999987544 445667777788999886433
No 260
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.20 E-value=0.017 Score=55.22 Aligned_cols=150 Identities=13% Similarity=0.081 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHhhccc-ccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc-CCchHHHH
Q 017429 40 ITELFSIWIIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIM 117 (371)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~ 117 (371)
|+....+.....+..+.. +...+.+.++.++++.+... +.-..+.+.-......+.++.++|.| ||-+.+.+
T Consensus 36 ~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~ 109 (571)
T KOG1237|consen 36 WLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINI 109 (571)
T ss_pred hHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 343333333333333333 34466777888899988876 66677777777778889999999975 89999999
Q ss_pred HHHHHHHHHHHHHhHHH-------------------------HHHHHHHHHHHhhhccchhHH-HHHHhhhcc---ccc-
Q 017429 118 GTASVVIFNTLFGLSVN-------------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---EEH- 167 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~---~~~- 167 (371)
+.++..++..+..+... ...++.+.-+..+|.|..-++ .++-+|.++ +++
T Consensus 110 ~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~ 189 (571)
T KOG1237|consen 110 GSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV 189 (571)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh
Confidence 99988888655543211 124555555666787777775 888899988 322
Q ss_pred hh--hhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 168 QA--LGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 168 r~--~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+. ..+.++....++|..++-.+-.+.-+
T Consensus 190 ~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 190 KGIPSFFNWFYFSQNGGALLAQTVLVYIQD 219 (571)
T ss_pred hCcccchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 22 56677788888888888777766655
No 261
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.18 E-value=0.00069 Score=62.81 Aligned_cols=150 Identities=15% Similarity=0.164 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHh-H---------HHHHHHHHHHHHHhhhccc-h
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-S---------VNFWMAVLTRFLLGSLNGL-L 152 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~---------~~~~~~~~~r~l~G~~~~~-~ 152 (371)
.+.+..+..++..++..+...+.-++.-|+++..+.++.++..+.... . ++.+..+.--++..+..+. .
T Consensus 257 ~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~ 336 (433)
T PF03092_consen 257 YGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAF 336 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHH
Confidence 777777777888888888888877888888888887776665543221 1 1122222233444443333 4
Q ss_pred hHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHH
Q 017429 153 GPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA 232 (371)
Q Consensus 153 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (371)
.|...+++|+.|+...|+..++..+..++|..++..++..+.+..+-. +.-| . +-+...++..+..++.+..
T Consensus 337 mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt------~~~f-~-~l~~lili~~~~~ll~l~l 408 (433)
T PF03092_consen 337 MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVT------RDDF-S-NLWLLILICSVIQLLPLPL 408 (433)
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------cccc-c-chHHHHHHHHHHHHHHHHH
Confidence 556889999999999999999999999999999999999988733211 1112 1 1222334444455555556
Q ss_pred Hhhcccccc
Q 017429 233 AFWLPETLH 241 (371)
Q Consensus 233 ~~~~~e~~~ 241 (371)
..++|+..+
T Consensus 409 l~lLp~~~~ 417 (433)
T PF03092_consen 409 LFLLPPQKR 417 (433)
T ss_pred HHHcCCCch
Confidence 667776543
No 262
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.08 E-value=0.00061 Score=62.66 Aligned_cols=85 Identities=22% Similarity=0.399 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH-H
Q 017429 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG-T 119 (371)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~-~ 119 (371)
|.++.+=+..+......+.+.|.++.+.+++|++..+ .|.+...--+..+++.|++|.++||+.+||.++++ .
T Consensus 11 r~l~~~k~f~~~~~~~~g~l~pll~vy~kQLGl~p~~------~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl 84 (618)
T KOG3762|consen 11 RALIVAKLFYLFFGARFGSLFPLLAVYFKQLGLNPAV------VGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSL 84 (618)
T ss_pred hhhheeeeeeeeeeecccccchHHHHHHHHcCCCHHH------hhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHH
Confidence 3344333445556667788899999999999999999 99999999999999999999999999876666555 5
Q ss_pred HHHHHHHHHHHh
Q 017429 120 ASVVIFNTLFGL 131 (371)
Q Consensus 120 ~~~~~~~~~~~~ 131 (371)
+....+.++..+
T Consensus 85 ~~~v~a~fll~f 96 (618)
T KOG3762|consen 85 LLSVTATFLLVF 96 (618)
T ss_pred HHHHHHHHheee
Confidence 555555555554
No 263
>PRK03612 spermidine synthase; Provisional
Probab=96.95 E-value=0.053 Score=51.50 Aligned_cols=121 Identities=14% Similarity=0.113 Sum_probs=69.2
Q ss_pred HHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHH---HHHHHhHHH----H-HHH
Q 017429 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF---NTLFGLSVN----F-WMA 138 (371)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~---~~~~~~~~~----~-~~~ 138 (371)
+..-+|-+..+ .+.+.+++..|..+|+.+++++.++.-|+ ...+-..+..++ ..+...... . ..+
T Consensus 41 l~~~~G~s~~~------~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~ 113 (521)
T PRK03612 41 ASYLLGDSVTQ------FSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLL 113 (521)
T ss_pred HHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456777777 89999999999999999999887432222 221111111111 111111111 1 112
Q ss_pred HHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 139 ~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+...++.++..|+..|. ..+..+. ..++-++..|-.+....+|+++|+++.+++.-
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 23334456666666664 3333332 22224566788888899999999999888765
No 264
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.91 E-value=0.15 Score=44.38 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=63.5
Q ss_pred HHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhccc--cch
Q 017429 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE--EHQ 168 (371)
Q Consensus 92 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~--~~r 168 (371)
.+.-+..+++.+.+..++|-|+++.++...+......- +-+.+..++-.-...|++.+..+.. -+|+++.-.. +.|
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~ 146 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQR 146 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhh
Confidence 34445666666689999999999999887776554322 2356677888889999998887776 6676665432 234
Q ss_pred ---------hhhhHhhhhhhhhHHhHHHhhh
Q 017429 169 ---------ALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 169 ---------~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
.+-.+.+.+...-+...|..++
T Consensus 147 ~~q~~~~~~~~ffg~Ffii~~~~qv~gn~is 177 (390)
T KOG3097|consen 147 GEQAGDGMKVRFFGEFFIIFQCAQVWGNLIS 177 (390)
T ss_pred hhhccCceeeeehhHHHHHHHHHHHHHHHHH
Confidence 3444555444444444444333
No 265
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.66 E-value=0.035 Score=51.06 Aligned_cols=128 Identities=8% Similarity=-0.103 Sum_probs=90.6
Q ss_pred chhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHh---H---H
Q 017429 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---S---V 133 (371)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~---~ 133 (371)
....+..+...-|+++.. +|..-+...+..+.+.+...++.+|+|..|.=+++...-.++..++.. . +
T Consensus 277 f~~lmt~yl~~~G~s~~~------igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSV------IGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred CcHHHHHHHHHCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345555566666999999 999999999999999999999999999888877776654444333322 1 1
Q ss_pred ----HHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 134 ----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 134 ----~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
+...++.+-++.-+|.=.+.. ..-++-|..|+++||...|.-....++-.++...++-.+
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 233344444444454223333 488899999999999999998888888777766665433
No 266
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.55 E-value=0.059 Score=49.68 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCc---h----HHHHHHHHHHHHHHHHHhH----------HHHHHHHHHHHHHh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK---P----VIIMGTASVVIFNTLFGLS----------VNFWMAVLTRFLLG 146 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr---~----~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~G 146 (371)
.++..+...+.-++.+|+..++--+.++| + =+-+++.+.+.+.++.... .+.++++...++++
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 56778888888888888887777775443 1 1345555555555554432 36789999999999
Q ss_pred hhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhh
Q 017429 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (371)
Q Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~ 192 (371)
+|+=+.+|+ .++++...|++-.+..++.+......|+.++..+++.
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~ 452 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL 452 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence 999898997 9999999999999999999888888888877777663
No 267
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.53 E-value=0.049 Score=50.28 Aligned_cols=106 Identities=16% Similarity=0.291 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhh---hcCCchHHHHHHHHHHHHHHHHHhH------------------HHHHHHHHHH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVAD---RYGRKPVIIMGTASVVIFNTLFGLS------------------VNFWMAVLTR 142 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r 142 (371)
.++..-...++..+++.+.+.+++ ++||++.+.++.++..+..++.-.. ++.....+.-
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 444455556677777777777775 5789999999888887777665431 2455667777
Q ss_pred HHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 143 ~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
++.|++-++.... +.++.+.. +++|..+.++...-..++..++-...
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 8999998888886 88888888 56688888887666666665544443
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.35 E-value=0.0083 Score=55.44 Aligned_cols=158 Identities=10% Similarity=0.153 Sum_probs=87.8
Q ss_pred cCCChhHHHHHHHHHHHhhcccccchhhH-HHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhh-hhcCCch
Q 017429 36 SGLPITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVA-DRYGRKP 113 (371)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~-dr~Grr~ 113 (371)
.+..+...+.+++..+...+......... +.....++++.++ ...+.|...++..+-.....+..+... -++.+|+
T Consensus 257 ~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~--av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~ 334 (488)
T KOG2325|consen 257 PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSE--AVLYNGITLSISGILSVILLLLYIFTRLGKIDKRR 334 (488)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccch--HHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccce
Confidence 34444555555555554444433322222 3444556777665 112234444444333333333333333 3445566
Q ss_pred HHHHHHHHHHHHHHHHHhH-------------------------------HHHHHHHHHH-HHHhhhccchhH-HHHHHh
Q 017429 114 VIIMGTASVVIFNTLFGLS-------------------------------VNFWMAVLTR-FLLGSLNGLLGP-IKAYAC 160 (371)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~r-~l~G~~~~~~~~-~~~~~~ 160 (371)
.+..++++......+..+. .+.+.+++.+ ++.|.+.-.... ..++-+
T Consensus 335 ~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlyS 414 (488)
T KOG2325|consen 335 IILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYS 414 (488)
T ss_pred eeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHH
Confidence 6666644444433332210 1122333333 334555444444 488999
Q ss_pred hhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
|...|++++...++++.....+..+||++......
T Consensus 415 kiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~ 449 (488)
T KOG2325|consen 415 KILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFT 449 (488)
T ss_pred HHhCCccccceeEEEEeccchhhhhhHHHHhhhHH
Confidence 99999999999999999999999999999888877
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.22 E-value=0.046 Score=50.65 Aligned_cols=109 Identities=13% Similarity=0.037 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCc-hHHHHHHHH---HHHHHHHHHhH---------HHHHHHHHHHHHHhhhcc
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK-PVIIMGTAS---VVIFNTLFGLS---------VNFWMAVLTRFLLGSLNG 150 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-~~l~~~~~~---~~~~~~~~~~~---------~~~~~~~~~r~l~G~~~~ 150 (371)
.-.....++++-.+|..+..+.. .-++| +.+.+..+. +....++|... ++-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 45666778888888887554431 11222 133333333 33333333322 355667777899999999
Q ss_pred chhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 151 ~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
..... ..+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88885 88889999999999998888889899998888775433
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.90 E-value=0.61 Score=42.26 Aligned_cols=120 Identities=14% Similarity=0.156 Sum_probs=56.5
Q ss_pred HHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHH
Q 017429 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (371)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 123 (371)
+..++..+......+...+..+++.+++-.+..+ ............+...+....--.+.-|. |+++.....+...
T Consensus 21 ~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~---~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~i 96 (406)
T KOG1479|consen 21 LIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNS---KNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAI 96 (406)
T ss_pred HHHHHHhcccccchHhhhccHHHHHhhcCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3444444444556667777777777766443322 11123333333444445555555555552 2222222222222
Q ss_pred HHHHHHHhH---------HHHHHHHHHHHHHhhhccchhHH-HHHHhhhccccch
Q 017429 124 IFNTLFGLS---------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ 168 (371)
Q Consensus 124 ~~~~~~~~~---------~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r 168 (371)
+....+.++ ..+...++.-.+.+.+.|.+... ....+ .+|++.-
T Consensus 97 l~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~yt 150 (406)
T KOG1479|consen 97 LFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYT 150 (406)
T ss_pred HHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHH
Confidence 222222222 23455555566677777776665 55444 4566543
No 271
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.87 E-value=0.089 Score=46.57 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=44.5
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhccc
Q 017429 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSVA 369 (371)
Q Consensus 318 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 369 (371)
+|++..+++.++........+.. .+.+.+.||+|||+..+..++++.++.+
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g-~~~G~laD~~Grk~~cl~~cily~~scl 114 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFG-TFVGSLADRYGRKKACLLFCILYSLSCL 114 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 79999999999999888888888 4789999999999998888888777653
No 272
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.65 E-value=0.003 Score=60.10 Aligned_cols=147 Identities=14% Similarity=0.234 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHH-HHHHHhHHHHhhhhhcC--CchHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYG--RKPVIIMG 118 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--rr~~l~~~ 118 (371)
++...++.....+....+.++.| ++..+|+.+.++ .+++..+..+ +.++|.+++|.+..|+. .|..+...
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~------A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~ 380 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ------ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFC 380 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHH
Confidence 33455566666677777888888 556789999888 7777766555 66788999999999885 45555444
Q ss_pred HHHHHHHHHH---HHh--H---------H----------------------------------------HHHHHHHHHHH
Q 017429 119 TASVVIFNTL---FGL--S---------V----------------------------------------NFWMAVLTRFL 144 (371)
Q Consensus 119 ~~~~~~~~~~---~~~--~---------~----------------------------------------~~~~~~~~r~l 144 (371)
.+...+..+. ..+ + . .+..+++..++
T Consensus 381 ~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~ 460 (539)
T PF03137_consen 381 IVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFI 460 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHH
Confidence 4444333322 100 0 0 01122233233
Q ss_pred Hhhhccc-hhHHHHHHhhhccccchhhhhHhhhhhh-hhHHhHHHhhhhhhcC
Q 017429 145 LGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAW-GIGLIIGPALGGFLAQ 195 (371)
Q Consensus 145 ~G~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~i~~~l~~ 195 (371)
.-+..+. ..|....+-..+|+++|+.++|+..... .+|.+=||++-|.+.|
T Consensus 461 ~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD 513 (539)
T PF03137_consen 461 LSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIID 513 (539)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHh
Confidence 2232222 3334556668899999999999986544 4688889999999988
No 273
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.62 E-value=0.0037 Score=55.21 Aligned_cols=106 Identities=19% Similarity=0.118 Sum_probs=2.2
Q ss_pred HHHHHHHHHHHHHhHHHHhhhhhc-CCchHHHH--HHHHHHHHHHHHHh----------HHHHHHHHHHHHHHhhhccch
Q 017429 86 YVGSSFMFGRALTSVFWGLVADRY-GRKPVIIM--GTASVVIFNTLFGL----------SVNFWMAVLTRFLLGSLNGLL 152 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~~--~~~~~~~~~~~~~~----------~~~~~~~~~~r~l~G~~~~~~ 152 (371)
.....++++-.+|....++.--+. .+|++... .-+++....++|.. .++-+..++.-++.|+.+|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 345678888888888777642111 24444332 12222222233311 234466777788999999988
Q ss_pred hHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 153 ~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
... ..+..+..++++|..+..+...+..+|..+|..++-
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -HHHH-----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 885 889999999999998888888888888888877653
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.19 E-value=0.12 Score=35.50 Aligned_cols=65 Identities=22% Similarity=0.128 Sum_probs=50.7
Q ss_pred hhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
.-+.+...+|....+ .++|..+.|++-+.+.++..++.+ ...++.++.++++.+..+.+...++.
T Consensus 7 gRFayTplLP~M~~~------~~ls~~~ag~lasaNy~GYL~GAl-~~~~~~~~~~~~~~~~~~l~~~~~~~ 71 (85)
T PF06779_consen 7 GRFAYTPLLPLMQAD------GGLSLSQAGWLASANYLGYLVGAL-LASRLPRHSRPRRLLRAGLLLTVLST 71 (85)
T ss_pred HHHHHHhHhHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 345666677766555 699999999999999999999994 77788887777888877777665544
No 275
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.05 E-value=0.058 Score=52.74 Aligned_cols=78 Identities=12% Similarity=0.221 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHH-HhhccccccccchhhhHHHHHHHHH-HHHHHhHHHHhhhhhcCC--chHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGR--KPVIIMG 118 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Gr--r~~l~~~ 118 (371)
++...+..++.......+..++|.+. +++|.+..+ .+++.+...+ +.+++.+++|+++||+++ |+.+.++
T Consensus 332 f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~------ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~ 405 (633)
T TIGR00805 332 YMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAE------ANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFA 405 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHH
Confidence 34445555555556666677888555 569999988 8888887766 568999999999999984 5666666
Q ss_pred HHHHHHHH
Q 017429 119 TASVVIFN 126 (371)
Q Consensus 119 ~~~~~~~~ 126 (371)
.+...++.
T Consensus 406 ~~~~~~~~ 413 (633)
T TIGR00805 406 ICLSTLSY 413 (633)
T ss_pred HHHHHHHH
Confidence 65555544
No 276
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.92 E-value=0.79 Score=41.85 Aligned_cols=98 Identities=18% Similarity=0.208 Sum_probs=69.3
Q ss_pred cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH--HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhH-H
Q 017429 79 DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG--TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-I 155 (371)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~ 155 (371)
+...+.|.+-++..+...++++..|++..++.+-.-+.++ .++.+...++++..+|.|..+++.++.+...-...+ +
T Consensus 282 ~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 282 NESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455689999999999999999999997777775444443 444555667778889999999998887765444333 4
Q ss_pred HHHHhhhccccchhhhhHhhh
Q 017429 156 KAYACEIFREEHQALGLSTVS 176 (371)
Q Consensus 156 ~~~~~~~~~~~~r~~~~~~~~ 176 (371)
..-++.....+.-+..+|+..
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHHHHhccccceeeeeeeHH
Confidence 555666666666666666653
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.46 E-value=0.94 Score=42.12 Aligned_cols=51 Identities=18% Similarity=0.146 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhh
Q 017429 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (371)
Q Consensus 134 ~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i 189 (371)
.++..++.-++.|++.+..... .++.+ .+|++. +..+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHH
Confidence 4556666667788888777765 55555 667553 444555666666665544
No 278
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.35 E-value=0.21 Score=46.46 Aligned_cols=48 Identities=19% Similarity=0.269 Sum_probs=43.0
Q ss_pred ccccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhh
Q 017429 318 LNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEH 366 (371)
Q Consensus 318 ~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 366 (371)
+|++..+ .|.+.+.+..+..+..+ .++++.||+|.|+++..+.+.-.+
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~qI-p~GlLaDrlG~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVLV-PVFLLTDYLRYKPVLVLQALSFVC 104 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHH
Confidence 8999999 99999999999999995 789999999999999887766544
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.94 E-value=0.44 Score=41.32 Aligned_cols=176 Identities=13% Similarity=0.049 Sum_probs=101.0
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhcccccc----c-----cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCch
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKRE----E-----DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP 113 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~ 113 (371)
....|+..++....+.+......++..+-.-+... . -.....|.+.-+-.+...+..+.+..+.||+.--.
T Consensus 14 ~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~~ 93 (409)
T KOG3880|consen 14 AVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFGF 93 (409)
T ss_pred chHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccch
Confidence 33455666666666654444444444332111100 0 00111455666666777777888888888875433
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 114 VIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
=..+..++.+.+.++.+++++.++-+++-.+..++.|.-....--++..+++. ..+-++.+.+.++++|..--.++
T Consensus 94 Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~----~i~~WSSGTGgAGliGa~SYa~l 169 (409)
T KOG3880|consen 94 RIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSI----VIAGWSSGTGGAGLIGASSYAFL 169 (409)
T ss_pred HHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCc----eeccccCCCCcchhhhhhHHHHH
Confidence 34445566777777888889888888888888787777655533344444433 34455566666666665554445
Q ss_pred cCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhc
Q 017429 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (371)
Q Consensus 194 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (371)
.+. + ....+...++...+.++....++++
T Consensus 170 T~~-------------~-~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 170 TSW-------------A-NLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred hhh-------------c-CCChhhHHHHHHHHHHHHHHHHHhe
Confidence 440 1 4555666677766666555554443
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.61 E-value=0.99 Score=40.93 Aligned_cols=106 Identities=18% Similarity=0.101 Sum_probs=73.2
Q ss_pred hHHHHHH-HHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH---------hHHHHHHHHHHHHHHhhhccchh
Q 017429 84 AGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---------LSVNFWMAVLTRFLLGSLNGLLG 153 (371)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~r~l~G~~~~~~~ 153 (371)
.-+...+ +++...+|.+.+.++-++ +||.. .+..++-.+..-++. .-.+-++++....+.|+..|-..
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP-DPRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC-CCcee-hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 4555566 888888887777776654 33433 333333333322222 13466788888899999999988
Q ss_pred HH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhh
Q 017429 154 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (371)
Q Consensus 154 ~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~ 191 (371)
.+ ..+..+..|++++-.+..+.......|...|..++-
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 86 899999999998888777777777778887776653
No 281
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=92.18 E-value=0.23 Score=41.93 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=53.6
Q ss_pred cchhhhhHhhhhhhhhHHhHHHhhhhhhcCcCCCCCCcccccccccCccchhHHHHHHHHHHHHHHHHhhccccccCCCC
Q 017429 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (371)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (371)
++|+........+.++|.++.... ++.... -+..- +-.|+..+.+.+++.++-++.+..+- ++-+...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ip--F~~~~~--------~~~~~-~~~W~~I~si~~lL~~IpLIly~ifG-k~fd~~~ 69 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIP--FLISSS--------VVIAL-TNNWQWILSIFILLIFIPLILYIIFG-KNFDIYS 69 (267)
T ss_pred CccceeeeeccccchhhHHHHHhh--HHhcch--------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhc-ccccccC
Confidence 456665566666778887765333 222100 00001 44577776776666665555544442 2211111
Q ss_pred CCccchhhhhhhhhhhhhhhhhcccCCccccccccccchHHHHHHHHHHHhh
Q 017429 246 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 297 (371)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (371)
+++.++. ++.....+....+.+|++..|...+.+......
T Consensus 70 ~~~k~~k------------~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~ 109 (267)
T PF07672_consen 70 PKEKQEK------------ENSTLSKKPSYKSILKEKETWKWILIYGIWLVV 109 (267)
T ss_pred ccccccc------------ccccccccchHHHHHccchHHHHHHHHHHHhee
Confidence 1100000 000112235677889999988887777765543
No 282
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.70 E-value=1.6 Score=40.18 Aligned_cols=110 Identities=17% Similarity=0.077 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH-HHHHhhhcc
Q 017429 86 YVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR 164 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~ 164 (371)
|-..++.+...+.+...-++.||+|-|+.+..+...+.++..+.+..++.+.....+-..|+-.+....+ +..+++...
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 4456667777889999999999999777777777767777777777888888888888888654443332 333332211
Q ss_pred ---------------------c--cchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 165 ---------------------E--EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 165 ---------------------~--~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
. ..+|.-.|+.+....+.+++.....|.+.+
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~ 469 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQ 469 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhh
Confidence 1 123455566677777777776666666666
No 283
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=87.44 E-value=8.6 Score=32.73 Aligned_cols=102 Identities=20% Similarity=0.204 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhh-cCCchHHH----HHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHhhhccchh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLG 153 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~ 153 (371)
......++..+..+|....|++... +.||+.+. .+.+..++..++... ..+...+++.-++.|++.=...
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4455566677777888888888864 45555544 223333333333111 1245667777788887532233
Q ss_pred HHHHHHhhhccccchhhhhHhhhhhhhhHHhH
Q 017429 154 PIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (371)
Q Consensus 154 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (371)
++.-.+..-++...+-+.--.++..+++|.++
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 33333333333333333333345556666554
No 284
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=85.84 E-value=28 Score=31.86 Aligned_cols=85 Identities=9% Similarity=0.067 Sum_probs=38.6
Q ss_pred HHHHHHhhh---ccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc---CCCCCCccccccc---
Q 017429 140 LTRFLLGSL---NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP---AEKYPNLFSSESL--- 209 (371)
Q Consensus 140 ~~r~l~G~~---~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~---~~~~~~~~g~~~~--- 209 (371)
.+.+..|+. .|+...+ .++..+++|...-.+++++.. +|.. .+--.+.|. .-+|-+..||+..
T Consensus 163 ags~afgvtl~~tg~~~~avaalf~qL~~~a~~t~g~~f~l----lG~a---flvRmi~Dvss~~L~WfsPlgW~~~~~p 235 (536)
T COG3559 163 AGSVAFGVTLAATGMVFTAVAALFAQLSPSARFTRGVAFAL----LGTA---FLVRMIGDVSSGTLSWFSPLGWSLQVRP 235 (536)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCccccccchhHHHH----HHHH---HHHHHHhcccccccccccCccceEEeee
Confidence 344555542 3344444 667777777554333333321 1211 112222222 2345566777653
Q ss_pred ccCccchhHHHHHHHHHHHHHH
Q 017429 210 FGKFPYFLPCLCISLFAFGVTI 231 (371)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~ 231 (371)
+-.-.|+..++..+++.++..+
T Consensus 236 yv~e~Wl~~llt~~~aa~l~gv 257 (536)
T COG3559 236 YVGERWLVLLLTLATAAVLTGV 257 (536)
T ss_pred cccchHHHHHHHHHHHHHHHHH
Confidence 2233566665555554444333
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=83.44 E-value=27 Score=30.12 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCc--hHHHHHHHHHHHHHHHHHhHH-------HHHHHHHHHHHHhhhccchhH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGTASVVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGP 154 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~~~~~~ 154 (371)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++......+..... ++..-+++..+.-.+.|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 68889999999999999998888765543 455555554444433332211 222234455555567788888
Q ss_pred H-HHHHhhhccccchhhhhHhhhhhhh
Q 017429 155 I-KAYACEIFREEHQALGLSTVSTAWG 180 (371)
Q Consensus 155 ~-~~~~~~~~~~~~r~~~~~~~~~~~~ 180 (371)
. ..+-++..|++.|...+.++..-.+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhh
Confidence 6 8888889999999998888654433
No 286
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=83.24 E-value=1.4 Score=43.14 Aligned_cols=80 Identities=15% Similarity=0.226 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHH-HHHHhHHHHhhhhhcC--CchHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFG-RALTSVFWGLVADRYG--RKPVIIMG 118 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~G--rr~~l~~~ 118 (371)
++...+...+.......+.+++| ++.++|+.+.+. +..+.+...+. ..+|..++|.+..|+. .|.+..+.
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~------An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~ 467 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASL------ANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFV 467 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH------HHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHH
Confidence 34556666777777788889999 555789999988 77777665544 4678889999999875 45555555
Q ss_pred HHHHHHHHHH
Q 017429 119 TASVVIFNTL 128 (371)
Q Consensus 119 ~~~~~~~~~~ 128 (371)
++...+..+.
T Consensus 468 ~~~~~l~l~~ 477 (735)
T KOG3626|consen 468 IVCSVLSLLF 477 (735)
T ss_pred HHHHHHHHHH
Confidence 5444444433
No 287
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=82.33 E-value=44 Score=31.57 Aligned_cols=80 Identities=10% Similarity=0.142 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 122 (371)
+..+.+..++.+...+.+........++..-++. +.+.+.|.+.....+...+.+++.+++.+|+|-+....+.-++.
T Consensus 266 L~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~--~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~ 343 (472)
T TIGR00769 266 ILDLALLVIAYGISINLVEVTWKSKLKAQYPSPN--EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVM 343 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3344444445555544444444444444433332 23444666666667777777888899999999887776665544
Q ss_pred HH
Q 017429 123 VI 124 (371)
Q Consensus 123 ~~ 124 (371)
.+
T Consensus 344 li 345 (472)
T TIGR00769 344 LL 345 (472)
T ss_pred HH
Confidence 44
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=82.02 E-value=8.1 Score=33.88 Aligned_cols=70 Identities=16% Similarity=0.197 Sum_probs=51.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.-.+..+.++++..++.-+..|+-+|...+ ..--+.+-.++++|-.+++....+-.+|..++..++-.+-
T Consensus 332 ~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 332 LQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 334455678888888888889996666555 4555556667888999999998888888888877765443
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=81.20 E-value=50 Score=31.27 Aligned_cols=56 Identities=11% Similarity=0.062 Sum_probs=44.0
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
+..++..+..-...++ .++-+.+.+|..=|+.|.+.++..++|+.--..+.-++.|
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 3345555655555664 8999999999999999999999999998877777767766
No 290
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=81.19 E-value=12 Score=27.54 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 125 (371)
.+.......++..++..+.|.+.|..|.+..+.+......+.
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 667777788888899999999999888777666554444433
No 291
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=78.42 E-value=6.4 Score=33.51 Aligned_cols=50 Identities=20% Similarity=0.109 Sum_probs=42.9
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 317 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
.+|+|..+...+-....++..++ +..|.+.|+.|++.++.+|.+...++.
T Consensus 31 ~l~~sq~~l~~l~~~~~~G~~~G--~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 31 RLGYSQSQLNTLSTAGDIGSYFG--ILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred HhCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 38999999999999888888774 478999999999999999888876654
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.28 E-value=18 Score=25.87 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhHHHHhhhhhc-CCchHHH
Q 017429 86 YVGSSFMFGRALTSVFWGLVADRY-GRKPVII 116 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~l~ 116 (371)
.-.+.-+++..+.....|++.||| |.++..+
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 334555667777788889999997 4444433
No 293
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=74.00 E-value=52 Score=31.95 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcCc
Q 017429 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (371)
Q Consensus 134 ~~~~~~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~~ 196 (371)
|.+|++-=.++.|++.....+. .-+.-+-+|++-|..+.+++....++|..+...+.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567777788999998888776 88888899999999999999999999999999988777653
No 294
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=71.41 E-value=31 Score=26.94 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhh
Q 017429 330 AITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEH 366 (371)
Q Consensus 330 ~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 366 (371)
++......+.. ++.+.+.+++|.|+.+.+|.+.+.+
T Consensus 44 ai~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~ 79 (156)
T PF05978_consen 44 AILYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAI 79 (156)
T ss_pred HHHHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 33334444555 4678889999999999998887664
No 295
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=69.91 E-value=70 Score=27.33 Aligned_cols=13 Identities=15% Similarity=-0.036 Sum_probs=6.3
Q ss_pred ccchhhhHHHHHH
Q 017429 320 YSTQMVGEVLAIT 332 (371)
Q Consensus 320 ~s~~~~~~~~~~~ 332 (371)
-|.....++++-+
T Consensus 215 as~~~ldYvFs~f 227 (254)
T PF07857_consen 215 ASQNGLDYVFSHF 227 (254)
T ss_pred CCCcchheeHHHH
Confidence 3444455555543
No 296
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=69.82 E-value=39 Score=30.43 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=75.5
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHH--HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhH-HHH
Q 017429 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII--MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (371)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~~~ 157 (371)
+.+.|..-.+..+..+++.+..|.+.-++.|..-++ ++...-+...+++..+++.|..+++.++.+..-....+ +..
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~ 349 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF 349 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH
Confidence 455778888888888999999999998888764433 44445555566677788899988888887765444444 467
Q ss_pred HHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 158 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
-+++....+.-|..+|+... ++-++-.++.-...|
T Consensus 350 ~iA~nL~~e~~gLvFGiNTF---vAl~lQsilT~iVvd 384 (433)
T KOG3810|consen 350 QIARNLSSELFGLVFGINTF---VALILQSILTLIVVD 384 (433)
T ss_pred HHHHhhhhhhheeeeehHHH---HHHHHHHhheEEEEc
Confidence 77777777777777776533 233444444444444
No 297
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=69.77 E-value=9.5 Score=37.61 Aligned_cols=65 Identities=12% Similarity=0.129 Sum_probs=44.0
Q ss_pred hhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHH-HhchhHHHHHHHHhhhhccc
Q 017429 299 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER-ILGPIMVARIAGVNFEHSVA 369 (371)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~-r~~~~~~~~~~~~~~~~~~~ 369 (371)
++....+..|+... +|++...+..++..+....-+... +++++.| ++|+++.+..+.+++.++.+
T Consensus 4 YGm~aiLvlYl~~~-----lg~~~~~A~~i~~~f~~l~yl~pi-lGg~iAD~~lG~~~tIl~~~ii~~lG~~ 69 (654)
T TIGR00926 4 YGMRTILVLYFLNF-----LGFSESTSTVLFHTFTYLCYLTPL-IGAIIADGWLGKFKTILYLSIVYVVGHA 69 (654)
T ss_pred eecHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 34445555665554 788888877777766666666553 5566655 67999998888888776654
No 298
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=69.12 E-value=13 Score=33.84 Aligned_cols=55 Identities=11% Similarity=-0.034 Sum_probs=43.3
Q ss_pred HHHHHhhhccchhH-HHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhcC
Q 017429 141 TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 141 ~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~~ 195 (371)
...+.+...-...+ ..+..+++.+|+.-|+.|.+.+...++|+..-..+...+.|
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 34454444434444 48899999999999999999999999999888888888887
No 299
>PRK11469 hypothetical protein; Provisional
Probab=67.97 E-value=64 Score=26.13 Aligned_cols=50 Identities=10% Similarity=0.034 Sum_probs=31.5
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 319 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
|.+.....................++.++.++.++|.-+..|.++..+++
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi 179 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGV 179 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455555555555555554566777777888877777777777665
No 300
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=66.16 E-value=5.4 Score=33.95 Aligned_cols=63 Identities=16% Similarity=0.252 Sum_probs=43.2
Q ss_pred HHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhh---------hhhcCCchHH
Q 017429 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLV---------ADRYGRKPVI 115 (371)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l---------~dr~Grr~~l 115 (371)
.+.-+..-+..++..+++-.+.++.+.++.+ ...++-+..+.-++..++.|.. .||+|||+..
T Consensus 23 GvGHmlNDitAScWFTYlllfltqiglsp~~------~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLTQIGLSPSS------RAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHHhcCCcch------hHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3344444444455556666677888998888 7777777777777877777644 4699998764
No 301
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=61.40 E-value=1.3e+02 Score=27.39 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=9.2
Q ss_pred HHHHHhHHHHhhhhhcC
Q 017429 94 GRALTSVFWGLVADRYG 110 (371)
Q Consensus 94 ~~~~~~~~~g~l~dr~G 110 (371)
..++.....|++..|+|
T Consensus 7 ~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 33444555666666554
No 302
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=59.19 E-value=1.7e+02 Score=27.95 Aligned_cols=78 Identities=13% Similarity=0.189 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 122 (371)
+..+++..+..++..+.+-.......++.--++ .+.+.+.|-..+...+...+..++.+.+.+|+|-+...++.-++.
T Consensus 282 L~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~--~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~ 359 (491)
T PF03219_consen 282 LLCIALLVIAYGISINLVEVVWKSQLKQLYPDP--NDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVI 359 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHH
Confidence 334445555555555554444443344433233 223444666677777777888889999999999887777653333
No 303
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=57.19 E-value=96 Score=26.44 Aligned_cols=24 Identities=21% Similarity=0.164 Sum_probs=15.9
Q ss_pred HHHHHHHHHhchhHHHHHHHHhhh
Q 017429 342 SLYPFLERILGPIMVARIAGVNFE 365 (371)
Q Consensus 342 ~~~~~l~~r~~~~~~~~~~~~~~~ 365 (371)
..+..+..|+..|++.+.|.+++.
T Consensus 258 igGk~lAskIS~rtVt~~ggi~Fi 281 (294)
T KOG2881|consen 258 IGGKYLASKISVRTVTLIGGILFI 281 (294)
T ss_pred hhhHHHhhhheeEEEEEecchhHH
Confidence 355667788888877766555543
No 304
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=53.87 E-value=33 Score=24.40 Aligned_cols=12 Identities=17% Similarity=0.119 Sum_probs=6.1
Q ss_pred HHHHHHHHhchh
Q 017429 343 LYPFLERILGPI 354 (371)
Q Consensus 343 ~~~~l~~r~~~~ 354 (371)
++.|++++++..
T Consensus 62 lG~WLD~~~~t~ 73 (100)
T TIGR02230 62 VGIWLDRHYPSP 73 (100)
T ss_pred HHHHHHhhcCCC
Confidence 455555555543
No 305
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=52.56 E-value=1.3e+02 Score=24.74 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=25.9
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHH--hchhHHHHHHHHhhhhcc
Q 017429 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI--LGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 319 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r--~~~~~~~~~~~~~~~~~~ 368 (371)
|.+.....................++.++.++ .+++. +..|.++..+++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG~ 203 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLGV 203 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHHH
Confidence 44444444444444444444443455555554 35555 667777766654
No 306
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=49.64 E-value=1.4e+02 Score=24.37 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=11.5
Q ss_pred hhhhhhhHHhHHHhhhhhhcC
Q 017429 175 VSTAWGIGLIIGPALGGFLAQ 195 (371)
Q Consensus 175 ~~~~~~~g~~~g~~i~~~l~~ 195 (371)
.....-++..+|..+++.+.+
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~ 187 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYR 187 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444555556666666655
No 307
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=47.88 E-value=55 Score=25.96 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=16.9
Q ss_pred HHHHhHHHHhhhhhcCCchHHHHHHHHHHHH
Q 017429 95 RALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (371)
Q Consensus 95 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 125 (371)
..+.-.+.|.+.-|++.++...-+.=...++
T Consensus 126 ~~~~L~ilG~~~a~~s~~~~~~s~lr~~~~G 156 (169)
T TIGR00267 126 TLIALLVLGVYLGRISRENILISSLKMVVIG 156 (169)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 3455556677777777666554443333333
No 308
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=47.49 E-value=73 Score=20.41 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHhhhccccchh
Q 017429 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 169 (371)
Q Consensus 134 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~ 169 (371)
++..+......-++..+.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 334444444444445555555678888888875543
No 309
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=46.31 E-value=1e+02 Score=24.81 Aligned_cols=24 Identities=17% Similarity=0.517 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhHHHHhhhhhcCC
Q 017429 88 GSSFMFGRALTSVFWGLVADRYGR 111 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~dr~Gr 111 (371)
+.-|.+++.+++.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 355778889999999999999885
No 310
>PRK10263 DNA translocase FtsK; Provisional
Probab=46.31 E-value=69 Score=34.19 Aligned_cols=13 Identities=38% Similarity=0.514 Sum_probs=5.9
Q ss_pred HHhHHHhhhhhhc
Q 017429 182 GLIIGPALGGFLA 194 (371)
Q Consensus 182 g~~~g~~i~~~l~ 194 (371)
|+++|..++..+.
T Consensus 143 GGIIG~lLs~lL~ 155 (1355)
T PRK10263 143 GGVIGSLLSTTLQ 155 (1355)
T ss_pred cchHHHHHHHHHH
Confidence 4444444444443
No 311
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=45.57 E-value=1.5e+02 Score=25.92 Aligned_cols=60 Identities=10% Similarity=0.090 Sum_probs=29.2
Q ss_pred ccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhh---cCCchHHHHHHHHHHHHHHHH
Q 017429 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR---YGRKPVIIMGTASVVIFNTLF 129 (371)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~Grr~~l~~~~~~~~~~~~~~ 129 (371)
+.....+..+.+..+..... .++..+. +...++.+-.++ ||.||.=+.+.+..++..+..
T Consensus 42 g~~s~SlaLLADa~Hml~D~------~al~lal------~A~~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~ 104 (296)
T COG1230 42 GLLTGSLALLADALHMLSDA------LALLLAL------IAIKLARRPATKRFTFGYKRLEILAAFLNALLLIVV 104 (296)
T ss_pred HHHhccHHHHHhHHHHHHHH------HHHHHHH------HHHHHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHH
Confidence 33334444555556655444 4443333 222333344443 777777666665555544433
No 312
>COG2119 Predicted membrane protein [Function unknown]
Probab=43.23 E-value=1.7e+02 Score=23.49 Aligned_cols=36 Identities=14% Similarity=0.312 Sum_probs=27.3
Q ss_pred HHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHH
Q 017429 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (371)
Q Consensus 91 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 126 (371)
..+...++...+.++++|+..|.+-.++.+++.+..
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 455667778888899999999888877766655544
No 313
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=42.56 E-value=56 Score=23.46 Aligned_cols=46 Identities=17% Similarity=0.204 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 129 (371)
.|-+-.+|.-.+++.++.+++..|+..+-+.=.+|..+..++..+.
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 7888889999999999999999999988777777766666665543
No 314
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=41.15 E-value=1.6e+02 Score=22.78 Aligned_cols=25 Identities=28% Similarity=0.615 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhHHHHhhhhhcCCch
Q 017429 89 SSFMFGRALTSVFWGLVADRYGRKP 113 (371)
Q Consensus 89 ~~~~~~~~~~~~~~g~l~dr~Grr~ 113 (371)
.-|.++..+...+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4567788899999999999988764
No 315
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=40.34 E-value=2.5e+02 Score=24.49 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=35.0
Q ss_pred HHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 138 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
.-..|.+.|+-.-.+.|.++++.-+||++++-...--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777765556677888988999665443333333344445555666655544
No 316
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=39.66 E-value=47 Score=25.78 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhhhhHHhH
Q 017429 135 FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (371)
Q Consensus 135 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (371)
+..+++...+.|+ |.....+.+++-.+++++.|..+|+-.+-.+++-+.
T Consensus 97 ~~~~~~S~~~Fg~--gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGL--GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHH--HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3334443333333 344455777888888888999999887777766543
No 317
>PRK02237 hypothetical protein; Provisional
Probab=38.95 E-value=88 Score=22.57 Aligned_cols=46 Identities=17% Similarity=0.112 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 129 (371)
.|-+..+|.-.+++.++.+++..|+..+-+.=.+|..+..++..+.
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 6788888998999999999999999887776667766666665443
No 318
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=38.57 E-value=3.4e+02 Score=25.51 Aligned_cols=127 Identities=12% Similarity=0.104 Sum_probs=77.1
Q ss_pred ChhHHHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
+..+.....+-.++..++.....|. .+....|++.++ ...+.++-.+...++.++--....+.|-|-....+
T Consensus 14 ~~~~~~~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~------~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG 85 (451)
T COG2233 14 PLGKLLLLGLQHLLAMFGATVLVPL--LVGLALGLSAED------TAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLG 85 (451)
T ss_pred ChHHHHHHHHHHHHHHHhcchHhhH--HhccCCCCCHHH------HHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEe
Confidence 3445555555555555544333333 245678999888 88888888888888888776644445555555555
Q ss_pred HHHHHHHHHHHHh-H--HHHHHHHHHHHHHhhhccchhHHHH-HHhhhccccchhhhhH
Q 017429 119 TASVVIFNTLFGL-S--VNFWMAVLTRFLLGSLNGLLGPIKA-YACEIFREEHQALGLS 173 (371)
Q Consensus 119 ~~~~~~~~~~~~~-~--~~~~~~~~~r~l~G~~~~~~~~~~~-~~~~~~~~~~r~~~~~ 173 (371)
.-...++-..... . ......+.+-+..|+..-...+... .+...+||-.-|..+-
T Consensus 86 ~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~ 144 (451)
T COG2233 86 SSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVL 144 (451)
T ss_pred chHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEee
Confidence 4444444433332 2 2356666666666766555566544 7888888877665433
No 319
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=38.38 E-value=1.5e+02 Score=28.46 Aligned_cols=28 Identities=7% Similarity=0.141 Sum_probs=14.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhch
Q 017429 325 VGEVLAITGFSLLVFQLSLYPFLERILGP 353 (371)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~ 353 (371)
.......+.+.+.+++ ..++++-+.++.
T Consensus 299 ~t~~i~~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 299 LTAAIILYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHHHHHcCC
Confidence 3333444555555555 355666665554
No 320
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.90 E-value=24 Score=31.15 Aligned_cols=30 Identities=10% Similarity=0.057 Sum_probs=15.9
Q ss_pred hccccchhhhhHhhhhhhhhHHhHHHhhhhhhc
Q 017429 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (371)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l~ 194 (371)
++|...| .|+++.+.++|++++.++.-.+.
T Consensus 209 LWP~~mR---~gvyY~sig~~gfl~~IlvLaIv 238 (372)
T KOG2927|consen 209 LWPRRMR---QGVYYLSIGAGGFLAFILVLAIV 238 (372)
T ss_pred cCcHHHh---cceeeeecchhHHHHHHHHHHHH
Confidence 4455444 34555555666666655554443
No 321
>COG1971 Predicted membrane protein [Function unknown]
Probab=35.61 E-value=2.4e+02 Score=22.86 Aligned_cols=27 Identities=15% Similarity=-0.037 Sum_probs=17.4
Q ss_pred HHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 342 SLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 342 ~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
.++.++...+|.|.-+..|.++..++.
T Consensus 155 ~IG~~~g~~~g~~ae~lgGiiLI~~G~ 181 (190)
T COG1971 155 IIGRKLGKFLGKYAEILGGIILIGIGV 181 (190)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 355666666677777777777665553
No 322
>PTZ00101 rhomboid-1 protease; Provisional
Probab=34.50 E-value=3.1e+02 Score=23.85 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=22.5
Q ss_pred HHHHHHhHHHHhhhh-hcCCchHHHHHHHHHHHHHHHH
Q 017429 93 FGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLF 129 (371)
Q Consensus 93 ~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~ 129 (371)
+..+......|...+ .+|++|.+++-.+....+.++.
T Consensus 119 l~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s 156 (278)
T PTZ00101 119 FFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILS 156 (278)
T ss_pred HHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH
Confidence 444555566666555 5899888766555555555443
No 323
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=34.40 E-value=1.7e+02 Score=24.45 Aligned_cols=40 Identities=18% Similarity=-0.020 Sum_probs=31.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHh
Q 017429 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVN 363 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~ 363 (371)
...+...+...+...++. +..+.+.||.|+|+.+..+...
T Consensus 39 ~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~ 78 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLL 78 (338)
T ss_pred HHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHH
Confidence 467788888888888877 5889999999988777666643
No 324
>PRK11469 hypothetical protein; Provisional
Probab=34.28 E-value=2.2e+02 Score=22.99 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=21.2
Q ss_pred HHhHHHHhhhhhcCCchHHHHHHHHHHHHHHH
Q 017429 97 LTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (371)
Q Consensus 97 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (371)
.|..++.++.+++|||.-++-|.++..++.-.
T Consensus 150 ~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 150 LGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555667788887777777777776543
No 325
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=34.10 E-value=1.1e+02 Score=18.67 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhHHHHhhhhh-cCCchHHHHHHHH
Q 017429 89 SSFMFGRALTSVFWGLVADR-YGRKPVIIMGTAS 121 (371)
Q Consensus 89 ~~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~ 121 (371)
....++.++.....|+..|+ +|.++...+..++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 34455566677788888885 5765555444333
No 326
>COG4769 Predicted membrane protein [Function unknown]
Probab=34.09 E-value=1e+02 Score=24.22 Aligned_cols=51 Identities=18% Similarity=0.349 Sum_probs=34.5
Q ss_pred HHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Q 017429 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (371)
Q Consensus 91 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 147 (371)
+.....+.+...-++..++|.|..=++|.- ..-++.+|..++++++++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 344445666666778889998876444322 234668899999998888764
No 327
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=33.06 E-value=4.2e+02 Score=24.91 Aligned_cols=30 Identities=30% Similarity=0.436 Sum_probs=22.3
Q ss_pred cccchhhhhHhhhhhhhhHHhHHHhhhhhh
Q 017429 164 REEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (371)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~i~~~l 193 (371)
.+++.+...++.+++.+.|.+.-|+..|..
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~ 47 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFG 47 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcc
Confidence 445566778888888888888888877544
No 328
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=32.82 E-value=3e+02 Score=25.54 Aligned_cols=34 Identities=6% Similarity=0.049 Sum_probs=25.9
Q ss_pred HhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 017429 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY 109 (371)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 109 (371)
... ++.++ ...+.+...+...++.++-+....+.
T Consensus 31 ~~~-l~~~~------~~~li~at~~~sgi~Tllq~~~~~~~ 64 (415)
T TIGR00801 31 LAP-LSAEQ------TQYLVSISLLTSGIGTLLQLFRTGGQ 64 (415)
T ss_pred ccc-CCHHH------HHHHHHHHHHHHHHHHHHHHhhhcCc
Confidence 444 77777 78888888888889998888776544
No 329
>COG5547 Small integral membrane protein [Function unknown]
Probab=32.17 E-value=1.3e+02 Score=18.78 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=18.2
Q ss_pred chHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccc
Q 017429 112 KPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGL 151 (371)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (371)
|..++.+.+...++.+...+.---..+++...+.|++.|.
T Consensus 8 kypIIgglvglliAili~t~GfwKtilviil~~lGv~iGl 47 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIGL 47 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555444422222333334445554443
No 330
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=31.62 E-value=16 Score=32.30 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=0.0
Q ss_pred HHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhh
Q 017429 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (371)
Q Consensus 143 ~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i 189 (371)
++.|++.+..... ..+.+ .+|++. +.....+.++++++.+++
T Consensus 5 ~~~~~~~~~~q~s~~glas-~~p~~y----~~a~~~Gq~~aGv~~s~l 47 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLAS-LFPPKY----TQAVMIGQGLAGVIVSLL 47 (309)
T ss_dssp ------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHh-cCCHHH----HHHHHhhccHHHHHHHHH
Confidence 3456666666664 55555 466654 333444555555554433
No 331
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=31.46 E-value=1.4e+02 Score=27.32 Aligned_cols=74 Identities=9% Similarity=-0.099 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhhcccccchhhHHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHH
Q 017429 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (371)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 121 (371)
.+.+.++.++...+.-+.......++.+++-+.-. . .+.-..+-.....+..++.|...|+..|+|++...+++
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~--l---vAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLL--L---VAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceeh--h---HHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhh
Confidence 34455556666555555444445555555443211 0 11112222334467778889999999999998776543
No 332
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=31.33 E-value=2.8e+02 Score=22.35 Aligned_cols=40 Identities=8% Similarity=0.161 Sum_probs=28.7
Q ss_pred HHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH
Q 017429 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (371)
Q Consensus 91 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (371)
..+...+++++.-.+..|.+||.++.+..++.++...+++
T Consensus 37 ~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 37 PAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 3455567777777889999999988877776666554443
No 333
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=31.12 E-value=1.4e+02 Score=18.73 Aligned_cols=28 Identities=11% Similarity=0.237 Sum_probs=15.0
Q ss_pred CccchhHHHHHHHHHHHHHHHHhhcccc
Q 017429 212 KFPYFLPCLCISLFAFGVTIAAFWLPET 239 (371)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (371)
.+++....++..+.+++.....-.+|++
T Consensus 28 ~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 28 TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4445555566666665555554455543
No 334
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.93 E-value=4.5e+02 Score=24.75 Aligned_cols=24 Identities=33% Similarity=0.246 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhh
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVAD 107 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d 107 (371)
-|.+.+...+.+++.+++.|+.+.
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~g 348 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSG 348 (593)
T ss_pred chHHHHHHHHHHHhcccccccccc
Confidence 456667777777788877776655
No 335
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=27.55 E-value=2e+02 Score=25.93 Aligned_cols=79 Identities=10% Similarity=0.133 Sum_probs=51.9
Q ss_pred HhhcccccchhhHH-HHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHHHHHHHHH
Q 017429 52 CTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (371)
Q Consensus 52 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (371)
+..++.+.+-+..+ ...++++-++ +.+......+.-....+|..++..+.+++.|++|....+.+..++..++.+.+.
T Consensus 42 lia~G~G~~K~ni~~~~~dq~~~~~-~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 42 LIAVGTGGIKPNISPFGADQYDEDD-DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHCCHHHHHHHHHHCSSTTT-TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccHHHHHHHHhcccc-hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 34455555555554 4556665432 223333456777777888888888999999999988888887777777766655
Q ss_pred h
Q 017429 131 L 131 (371)
Q Consensus 131 ~ 131 (371)
.
T Consensus 121 ~ 121 (372)
T PF00854_consen 121 S 121 (372)
T ss_dssp C
T ss_pred h
Confidence 4
No 336
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=27.29 E-value=35 Score=28.42 Aligned_cols=48 Identities=10% Similarity=0.038 Sum_probs=28.0
Q ss_pred HHHHhhhccchhHH-HHHHhhhccccchhhhhHhhhhhhhhHHhHHHhhh
Q 017429 142 RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (371)
Q Consensus 142 r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~i~ 190 (371)
-.-.|+|.|.+..+ ..-+.+.+|+ ......++......+.+..|-.+.
T Consensus 178 AMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 178 AMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467877766664 7777778864 445555555555555555444333
No 337
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=26.63 E-value=2.5e+02 Score=22.29 Aligned_cols=57 Identities=21% Similarity=0.293 Sum_probs=25.5
Q ss_pred HHHHhcCCCccCCccccchhhhHHHHH--HHHHHHHHHHHHHHHHHHHhchhHHHHHHHHh
Q 017429 305 FSLWANSPKKLGGLNYSTQMVGEVLAI--TGFSLLVFQLSLYPFLERILGPIMVARIAGVN 363 (371)
Q Consensus 305 ~~~~~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~ 363 (371)
.|.++..|.... .+.....|.+.++ .++.+++++++-...+.+..|...-+..|.++
T Consensus 50 ~P~~ll~Pf~~g--~wk~t~~G~~igi~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~ 108 (173)
T PF11085_consen 50 GPNFLLEPFALG--DWKNTWLGNLIGIVFIGVFSIVAALLYYALLKKFKGPWPGILYGLAW 108 (173)
T ss_pred ccChhhhhhhcc--chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 344444444332 3334445555443 34445555543333333334555555555544
No 338
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=26.36 E-value=1.4e+02 Score=20.15 Aligned_cols=17 Identities=12% Similarity=0.032 Sum_probs=11.9
Q ss_pred HHHHHHHHhchhHHHHH
Q 017429 343 LYPFLERILGPIMVARI 359 (371)
Q Consensus 343 ~~~~l~~r~~~~~~~~~ 359 (371)
++..+..|.|+|++-.+
T Consensus 19 ~GD~iG~kvGKkrlslF 35 (79)
T PF11283_consen 19 LGDRIGSKVGKKRLSLF 35 (79)
T ss_pred HHHHHHHHHhHHHhhhh
Confidence 67777778888775443
No 339
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=26.15 E-value=3.2e+02 Score=23.70 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 017429 132 SVNFWMAVLTRFLLGSLN 149 (371)
Q Consensus 132 ~~~~~~~~~~r~l~G~~~ 149 (371)
.++.+.+.+.-++.+++.
T Consensus 20 ~~~~~l~~~~~~~~~F~~ 37 (284)
T PF12805_consen 20 FPYPWLLILVLALLTFFF 37 (284)
T ss_pred hhccHHHHHHHHHHHHHH
Confidence 344444444444444433
No 340
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=25.77 E-value=3.5e+02 Score=23.15 Aligned_cols=8 Identities=13% Similarity=0.331 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 017429 42 ELFSIWII 49 (371)
Q Consensus 42 ~~~~~~~~ 49 (371)
++.-+.++
T Consensus 181 RivG~~LA 188 (254)
T PF07857_consen 181 RIVGIILA 188 (254)
T ss_pred hhHhHHHH
Confidence 34433333
No 341
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=25.55 E-value=5.4e+02 Score=25.97 Aligned_cols=53 Identities=21% Similarity=0.109 Sum_probs=31.8
Q ss_pred hHHHHhhhhhc----CCchHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHhhhccc
Q 017429 99 SVFWGLVADRY----GRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNGL 151 (371)
Q Consensus 99 ~~~~g~l~dr~----Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~ 151 (371)
+.+++-++|.= ||.+-++++.++++++.+...+ .+..+.+...-++.+++.++
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 34445566643 4567777787777777766654 44555666555555555444
No 342
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.37 E-value=2.4e+02 Score=24.60 Aligned_cols=77 Identities=13% Similarity=0.015 Sum_probs=40.4
Q ss_pred cccccccchHHHHHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhH
Q 017429 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 355 (371)
++..++|+.+............+..... | .+ .+-...++++-+-++-+.+++.+. -++.+|++|-.
T Consensus 63 ~~~~~~p~~~~~~~l~a~li~~nW~lfi----W--Av-----n~g~~leaSLGY~InPL~~VllG~---lflkErls~~Q 128 (293)
T COG2962 63 KQLLKQPKTLLMLALTALLIGLNWWLFI----W--AV-----NNGHVLEASLGYFINPLVNVLLGR---LFLKERLSRLQ 128 (293)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHhh----e--ec-----CCCchhHHHhHHHHHHHHHHHHHH---HHHHhhccHHH
Confidence 3466777666655555544433333322 2 22 222344455555555566665332 34678888877
Q ss_pred HHHHHHHhhhh
Q 017429 356 VARIAGVNFEH 366 (371)
Q Consensus 356 ~~~~~~~~~~~ 366 (371)
.+.+++....+
T Consensus 129 ~iAV~lA~~GV 139 (293)
T COG2962 129 WIAVGLAAAGV 139 (293)
T ss_pred HHHHHHHHHHH
Confidence 76665554443
No 343
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=25.35 E-value=5.1e+02 Score=23.41 Aligned_cols=91 Identities=20% Similarity=0.254 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHHHHHHH---HHHHHHHhHHHHHHHHHHHHHHhhhccc--hhHHHHH
Q 017429 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV---IFNTLFGLSVNFWMAVLTRFLLGSLNGL--LGPIKAY 158 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~r~l~G~~~~~--~~~~~~~ 158 (371)
.|....+..++. +-.++.+++.+.+|--+.+..+.++.. -..+....++|.......-.+.|...|. ....+.-
T Consensus 49 ~GI~~laP~la~-~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLAA-FLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 444444444443 445677788999999999988877653 2334555666766666666677765444 3334555
Q ss_pred HhhhccccchhhhhHhh
Q 017429 159 ACEIFREEHQALGLSTV 175 (371)
Q Consensus 159 ~~~~~~~~~r~~~~~~~ 175 (371)
+.-+-+++++..+.|+.
T Consensus 128 Lgii~k~D~~y~a~Gil 144 (354)
T PF04346_consen 128 LGIIEKEDHKYLAKGIL 144 (354)
T ss_pred hhhcChhhhHHHHHHHH
Confidence 55555556666666654
No 344
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=25.05 E-value=4.9e+02 Score=26.25 Aligned_cols=52 Identities=13% Similarity=0.025 Sum_probs=30.6
Q ss_pred HHHHhhhhh----cCCchHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHhhhccc
Q 017429 100 VFWGLVADR----YGRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNGL 151 (371)
Q Consensus 100 ~~~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~ 151 (371)
.+.+-++|. -||.+-++++.++++++.+...+ .+.++.+...-++.+++.++
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 344566764 35566677777777776665554 45556666655555554443
No 345
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=24.94 E-value=67 Score=23.51 Aligned_cols=17 Identities=24% Similarity=0.147 Sum_probs=9.7
Q ss_pred cccccccchHHHHHHHH
Q 017429 276 KSLLKNWPLMSSIIVYC 292 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~ 292 (371)
+.+++++++....+.+-
T Consensus 36 ~~Ll~n~~y~ipf~lNq 52 (113)
T PF10639_consen 36 KFLLLNPKYIIPFLLNQ 52 (113)
T ss_pred HHHHHhHHHHHHHHHHH
Confidence 34667777665554444
No 346
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=24.46 E-value=2.1e+02 Score=21.75 Aligned_cols=25 Identities=28% Similarity=0.064 Sum_probs=18.4
Q ss_pred HHhhhccccchhhhhHhhhhhhhhH
Q 017429 158 YACEIFREEHQALGLSTVSTAWGIG 182 (371)
Q Consensus 158 ~~~~~~~~~~r~~~~~~~~~~~~~g 182 (371)
-+.|++|+..|....+.++......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHH
Confidence 4679999999998877765544433
No 347
>PRK03612 spermidine synthase; Provisional
Probab=24.33 E-value=4e+02 Score=25.70 Aligned_cols=56 Identities=21% Similarity=0.243 Sum_probs=34.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCccCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017429 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (371)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (371)
.+..++..+....+.......+... +|-+....+.+.+.+-.+..+++. +++++.+
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~-----~G~s~~~~~~ii~~fl~glalGs~-l~~~~~~ 75 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYL-----LGDSVTQFSTVIGLMLFAMGVGAL-LSKYLLR 75 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 3444445555555655555555444 677777788888877777777774 5555543
No 348
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=24.31 E-value=2.5e+02 Score=19.39 Aligned_cols=40 Identities=15% Similarity=0.076 Sum_probs=27.3
Q ss_pred HHHhHHHHhhhhhcCC-------chHHHHHHHHHHHHHHHHHhHHHH
Q 017429 96 ALTSVFWGLVADRYGR-------KPVIIMGTASVVIFNTLFGLSVNF 135 (371)
Q Consensus 96 ~~~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 135 (371)
....+.++++.+|..+ ++.+..+.++...+.++++..++.
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 4556666777776654 677777777777777777765543
No 349
>PLN02878 homogentisate phytyltransferase
Probab=24.12 E-value=4.5e+02 Score=22.91 Aligned_cols=72 Identities=15% Similarity=0.046 Sum_probs=32.7
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHhhhhhh
Q 017429 108 RYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAW 179 (371)
Q Consensus 108 r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 179 (371)
|+|+|+...++..+..++........-.........+...+........-.-+...+.+.+....+.++..+
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~~i~~g~~~~~~~~~~~~~~~h~~l~~~L~~rs~~vD~~sk~~i~~fY~fiw 266 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAAAILVGASSSFLWSKIITVLGHGILASILWQRAQSVDLSSKAAITSFYMFIW 266 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcCcccHHHHHHHHHHHH
Confidence 588888887776665555542222111111122333444444333322222233334445555555555443
No 350
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=23.86 E-value=2.1e+02 Score=18.33 Aligned_cols=44 Identities=16% Similarity=0.088 Sum_probs=23.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhh
Q 017429 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEH 366 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 366 (371)
....................++.++.++.+++.-.+.+.++..+
T Consensus 23 ~~~~~~ig~~~~~~~~~G~~~G~~~~~~~~~~~~~igg~iLi~i 66 (67)
T PF02659_consen 23 LLIALIIGIFQFIMPLLGLLLGRRLGRFIGSYAEWIGGIILIFI 66 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555444444445666777766666555555555443
No 351
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=23.78 E-value=5.4e+02 Score=23.15 Aligned_cols=49 Identities=8% Similarity=0.007 Sum_probs=31.3
Q ss_pred HHHHHHhhccccccccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCchHHHHH
Q 017429 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (371)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 118 (371)
.|.+.+-+...+.. .-+....+.+--.++.+-+|.-.|+.|----.-+.
T Consensus 58 ip~~~~i~~~~~~~------~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~ 106 (344)
T PF06379_consen 58 IPDFFSIYSATPAS------TLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIA 106 (344)
T ss_pred CCcHHHHHHhCChh------HHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHH
Confidence 34555555544444 44445556677778999999999988865444433
No 352
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=22.57 E-value=2.9e+02 Score=22.48 Aligned_cols=14 Identities=29% Similarity=0.352 Sum_probs=9.2
Q ss_pred HHHHhhhhhcCCch
Q 017429 100 VFWGLVADRYGRKP 113 (371)
Q Consensus 100 ~~~g~l~dr~Grr~ 113 (371)
+..+...|||||+-
T Consensus 153 p~i~~~leryg~~l 166 (191)
T PF03596_consen 153 PIIAEFLERYGRWL 166 (191)
T ss_pred hHHHHHHHHhcccH
Confidence 45566677888763
No 353
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.64 E-value=1.1e+02 Score=22.17 Aligned_cols=34 Identities=21% Similarity=0.055 Sum_probs=23.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhccchhHH
Q 017429 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI 155 (371)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (371)
..++.++=-++++-.+.++...+.|++.|...+.
T Consensus 60 a~iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3445555555665566677778899998887775
No 354
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=21.26 E-value=6.9e+02 Score=23.45 Aligned_cols=11 Identities=9% Similarity=-0.212 Sum_probs=6.5
Q ss_pred hHHHHhhhhhc
Q 017429 99 SVFWGLVADRY 109 (371)
Q Consensus 99 ~~~~g~l~dr~ 109 (371)
+++.-++.||.
T Consensus 74 sp~v~r~l~~l 84 (438)
T TIGR00366 74 SPIVYKLLKTI 84 (438)
T ss_pred CHHHHHHHHHH
Confidence 45666666654
No 355
>CHL00031 psbT photosystem II protein T
Probab=21.19 E-value=1.6e+02 Score=16.02 Aligned_cols=15 Identities=13% Similarity=0.184 Sum_probs=9.0
Q ss_pred HHHHHhhccccccCC
Q 017429 229 VTIAAFWLPETLHRH 243 (371)
Q Consensus 229 ~~~~~~~~~e~~~~~ 243 (371)
.+....+.+|+|+-.
T Consensus 16 ilFFAI~FRePPri~ 30 (33)
T CHL00031 16 IIFFAIFFREPPKVP 30 (33)
T ss_pred HHHHhheecCCCCCC
Confidence 344556778877543
No 356
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=21.12 E-value=1.6e+02 Score=21.18 Aligned_cols=46 Identities=24% Similarity=0.192 Sum_probs=33.5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHhhhhcc
Q 017429 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVNFEHSV 368 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~ 368 (371)
+...|-.++.++-..++.++ +.++..|+..+.+-=..|..+..++.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl-~W~w~vdg~~Pd~~D~iGa~i~L~G~ 98 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASL-LWGWLVDGVRPDRWDWIGAAICLVGV 98 (107)
T ss_pred cccchhHHHHhhhhHHHHHH-HHHhhhcCcCCChHHHHhHHHHHHhH
Confidence 46678889999988898884 77888888777666555555554444
No 357
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=20.74 E-value=2.9e+02 Score=19.57 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=11.5
Q ss_pred hhhhhHhhhhhhhhHHhHHHh
Q 017429 168 QALGLSTVSTAWGIGLIIGPA 188 (371)
Q Consensus 168 r~~~~~~~~~~~~~g~~~g~~ 188 (371)
-|...++...+.++|+...-.
T Consensus 27 ~GfslS~L~~slgv~Q~~~kv 47 (97)
T PF08611_consen 27 MGFSLSYLTASLGVGQFFIKV 47 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445555555566666655433
Done!