Query 017430
Match_columns 371
No_of_seqs 203 out of 1562
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 08:30:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017430.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017430hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 3.2E-51 7E-56 396.9 31.1 263 57-354 63-335 (365)
2 KOG0697 Protein phosphatase 1B 100.0 6.6E-51 1.4E-55 364.7 24.2 282 54-359 17-301 (379)
3 PTZ00224 protein phosphatase 2 100.0 1.5E-47 3.2E-52 372.6 31.6 262 49-353 12-275 (381)
4 KOG0698 Serine/threonine prote 100.0 1.7E-46 3.8E-51 361.6 30.6 254 61-354 42-309 (330)
5 PF00481 PP2C: Protein phospha 100.0 4.3E-47 9.4E-52 354.1 19.9 246 60-341 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 7.3E-43 1.6E-47 326.1 24.2 250 55-352 4-255 (262)
7 KOG0700 Protein phosphatase 2C 100.0 6.4E-43 1.4E-47 330.9 22.4 255 70-336 82-378 (390)
8 KOG0699 Serine/threonine prote 100.0 4.4E-43 9.6E-48 324.2 20.2 180 156-359 327-513 (542)
9 cd00143 PP2Cc Serine/threonine 100.0 4.1E-39 9E-44 298.3 31.3 251 60-348 2-254 (254)
10 smart00332 PP2Cc Serine/threon 100.0 2.3E-38 5E-43 294.1 32.5 250 58-346 5-255 (255)
11 PRK14559 putative protein seri 100.0 2.2E-37 4.7E-42 317.1 26.7 249 58-353 374-639 (645)
12 KOG1323 Serine/threonine phosp 100.0 2.1E-30 4.5E-35 238.1 19.5 240 86-353 143-491 (493)
13 KOG1379 Serine/threonine prote 100.0 1.3E-28 2.9E-33 226.3 19.4 206 72-348 90-330 (330)
14 KOG0618 Serine/threonine phosp 99.9 4.4E-22 9.6E-27 204.5 16.7 246 57-352 520-775 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 9.4E-21 2E-25 171.6 13.7 188 64-316 3-196 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 3.4E-16 7.3E-21 139.6 21.9 175 71-333 15-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 2.8E-14 6.2E-19 151.3 23.4 194 66-348 560-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 2.2E-12 4.7E-17 114.8 22.3 178 85-349 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.4 7.1E-05 1.5E-09 73.6 21.9 190 72-349 161-366 (367)
20 COG2168 DsrH Uncharacterized c 56.2 5.1 0.00011 31.3 0.8 52 284-343 22-73 (96)
21 PRK10693 response regulator of 50.9 2.2E+02 0.0048 26.9 13.1 105 73-191 150-259 (303)
22 COG3700 AphA Acid phosphatase 48.7 43 0.00094 29.5 5.3 49 288-336 71-130 (237)
23 PF09436 DUF2016: Domain of un 41.8 17 0.00036 27.0 1.5 18 286-304 26-43 (72)
24 PRK06369 nac nascent polypepti 30.3 3E+02 0.0065 22.4 7.3 57 270-329 36-99 (115)
25 KOG0641 WD40 repeat protein [G 25.7 3E+02 0.0064 25.3 7.0 31 170-200 242-274 (350)
26 PF05402 PqqD: Coenzyme PQQ sy 22.6 2E+02 0.0044 20.1 4.6 41 289-331 2-42 (68)
27 PF06972 DUF1296: Protein of u 21.7 1.4E+02 0.0031 21.2 3.3 26 302-330 19-44 (60)
28 TIGR00264 alpha-NAC-related pr 21.5 4.5E+02 0.0098 21.4 7.2 60 267-329 37-101 (116)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.2e-51 Score=396.91 Aligned_cols=263 Identities=29% Similarity=0.470 Sum_probs=226.4
Q ss_pred CceeEeEEecCCCCCCCCceEEEeecC----------CCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCC
Q 017430 57 AGIRWGSVSLQGLREEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGK 126 (371)
Q Consensus 57 ~~~~~~~~s~~G~r~~nED~~~v~~~~----------~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~ 126 (371)
..++++..|++|.|+.|||++++..+. .....||+|||||||+.+++|+++++.+.+.+.. .
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~--------~ 134 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDE--------D 134 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhh--------c
Confidence 457889999999999999998775431 1235799999999999999999999999886532 1
Q ss_pred ChHHHHHHHHHHHHHHhHHHHHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCC
Q 017430 127 DFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQV 206 (371)
Q Consensus 127 ~~~~~~~~L~~a~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~ 206 (371)
....++++|.++|.++|+.|...... .....+|||++++++.++++|+||+||||+|++++|++++||.||++.+
T Consensus 135 ~~~~~~~al~~af~~~d~~~~~~~~~-~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~---- 209 (365)
T PLN03145 135 FPREIEKVVSSAFLQTDTAFAEACSL-DASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMC---- 209 (365)
T ss_pred cchhHHHHHHHHHHHHhHHHHhhhcc-ccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCC----
Confidence 23467889999999999998764322 2334599999999999999999999999999999999999999999987
Q ss_pred CHHHHHHHHHcCCEEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecC
Q 017430 207 SLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS 286 (371)
Q Consensus 207 ~~~E~~Ri~~~gg~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~ 286 (371)
+.|..||.++||+|..+|+.|.+.+||||||..+|..+ ...+..++++|++..+++.+
T Consensus 210 -~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k---------------------~~~~~~vs~ePdv~~~~l~~ 267 (365)
T PLN03145 210 -SKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMK---------------------GSDGGPLSAEPELMTTQLTE 267 (365)
T ss_pred -HHHHHHHHHcCCceecceECCccccccccccccccccc---------------------cccCCCcceEEEEEEEECCC
Confidence 89999999999999999999999999999998887311 01123467899999999999
Q ss_pred CCeEEEEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCch
Q 017430 287 DAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVE 354 (371)
Q Consensus 287 ~~d~liL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~ 354 (371)
+|+|||||||||||+|+++++++++++.+....+++++|+.|++.|+.+++.||||||||+|+....+
T Consensus 268 ~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~ 335 (365)
T PLN03145 268 EDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPP 335 (365)
T ss_pred CCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCc
Confidence 98899999999999999999999999888888899999999999999999999999999999985443
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-51 Score=364.66 Aligned_cols=282 Identities=29% Similarity=0.529 Sum_probs=249.4
Q ss_pred CCCCceeEeEEecCCCCCCCCceEEEee---cCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHH
Q 017430 54 SGVAGIRWGSVSLQGLREEMEDGAVIQS---DGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDA 130 (371)
Q Consensus 54 ~~~~~~~~~~~s~~G~r~~nED~~~v~~---~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 130 (371)
.+.+.++||..|+||||-+|||++.... ...++|+||+|||||.|+..|.+++.+|.+.+...-.-.........+.
T Consensus 17 G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~ 96 (379)
T KOG0697|consen 17 GEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVEN 96 (379)
T ss_pred CcCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHH
Confidence 5678899999999999999999976653 3467899999999999999999999999998874332111122345678
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHH
Q 017430 131 IKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQE 210 (371)
Q Consensus 131 ~~~~L~~a~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E 210 (371)
.+.-|+..|.++|+.+....+-......+||||+.+++....+|++|+||||++|+|+|+++.-|.||+|++ |.|
T Consensus 97 ~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~-----p~E 171 (379)
T KOG0697|consen 97 VEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYL-----PKE 171 (379)
T ss_pred HHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCC-----hHH
Confidence 899999999999999888765555556699999999999999999999999999999999999999999998 999
Q ss_pred HHHHHHcCCEEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeE
Q 017430 211 IRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEF 290 (371)
Q Consensus 211 ~~Ri~~~gg~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~ 290 (371)
++||+.|||-|--.||+|.|+|||||||+.||.- -..++.+++|+++|++..+..+..|+|
T Consensus 172 keRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v-------------------~~kgp~eQlVSPEPev~~~~R~eedeF 232 (379)
T KOG0697|consen 172 KERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNV-------------------PGKGPTEQLVSPEPEVYIIERSEEDEF 232 (379)
T ss_pred HHHHhcCCCeEEEEEecceeeeehhccCcccccC-------------------CCCCchhcccCCCCceEEeeccccCcE
Confidence 9999999999999999999999999999999831 235678899999999999999988899
Q ss_pred EEEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCchhhHHH
Q 017430 291 VLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELMRSI 359 (371)
Q Consensus 291 liL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~~~~~~ 359 (371)
|||++||+||.|+++|+.++++..+.-..+...+|+.+++.++-+|++||+|+|++-|-+........+
T Consensus 233 ivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~~eav 301 (379)
T KOG0697|consen 233 IVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVSIEAV 301 (379)
T ss_pred EEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCCHHHH
Confidence 999999999999999999999999988999999999999999999999999999999988776555444
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.5e-47 Score=372.61 Aligned_cols=262 Identities=30% Similarity=0.473 Sum_probs=221.0
Q ss_pred CCCCCCCCCceeEeEEecCCCCCCCCceEEEeecCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCCh
Q 017430 49 APSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDF 128 (371)
Q Consensus 49 ~~~~~~~~~~~~~~~~s~~G~r~~nED~~~v~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~ 128 (371)
..+.......+.+++.+.+|.|++|||++++... ++..+|+|||||||..+|+++++.|.+.+.+...
T Consensus 12 ~~~~~~~~~~~~~g~~s~~G~R~~nED~~~v~~~--~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~---------- 79 (381)
T PTZ00224 12 KLVDRAGNSIFRCASACVNGYRESMEDAHLLYLT--DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPE---------- 79 (381)
T ss_pred cccccCCCccEEEEEEeCCCCCCCCCCeeEeccC--CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccc----------
Confidence 3344457788999999999999999999876543 3446999999999999999999999876532210
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhccCcCCCCceeEEEEEe-cCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCC
Q 017430 129 DAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIG-RDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVS 207 (371)
Q Consensus 129 ~~~~~~L~~a~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~-~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~ 207 (371)
....+.|.++|..+|++|++. ...+|||++++++. ++++|++||||||+|++|+|++++||+||++.+
T Consensus 80 ~~~~~~l~~a~~~~d~~i~~~------~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~----- 148 (381)
T PTZ00224 80 PMTDERMEELCLEIDEEWMDS------GREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNN----- 148 (381)
T ss_pred cccHHHHHHHHHHHHHHHHhc------ccCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCC-----
Confidence 111345889999999999853 22469999988886 579999999999999999999999999999987
Q ss_pred HHHHHHHHHcCCEEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCC
Q 017430 208 LQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSD 287 (371)
Q Consensus 208 ~~E~~Ri~~~gg~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~ 287 (371)
+.|..||.++||.+..+|+.|.+.+||+|||..+|.+.. ....++.|+++|++..+++.++
T Consensus 149 ~~E~~RI~~~gg~v~~~Rv~G~l~vTRalGd~~~K~~~~-------------------~~~~~~~v~~~Pdi~~~~l~~~ 209 (381)
T PTZ00224 149 PGERQRIEACGGRVVSNRVDGDLAVSRAFGDRSFKVKGT-------------------GDYLEQKVIAVPDVTHLTCQSN 209 (381)
T ss_pred HHHHhHHHHccCEeccccccCceeeecccCCcccccccc-------------------cccccCcceeeeEEEEEECCCC
Confidence 789999999999999999999999999999998884321 1122356789999999999988
Q ss_pred CeEEEEEcCcccc-cCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCc
Q 017430 288 AEFVLLASDGLWD-YMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASV 353 (371)
Q Consensus 288 ~d~liL~SDGl~d-~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~ 353 (371)
|+|||||||||| +++++++.+++.+.+....+++.+|+.|++.|+.+|+.||||||||++.....
T Consensus 210 -D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~~ 275 (381)
T PTZ00224 210 -DFIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGAS 275 (381)
T ss_pred -CEEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCCC
Confidence 899999999999 89999999999877767789999999999999999999999999999987653
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-46 Score=361.64 Aligned_cols=254 Identities=40% Similarity=0.584 Sum_probs=222.8
Q ss_pred EeEEecCCCCCCCCceEEEeecC------CC-CeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHH
Q 017430 61 WGSVSLQGLREEMEDGAVIQSDG------LD-GFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKK 133 (371)
Q Consensus 61 ~~~~s~~G~r~~nED~~~v~~~~------~~-~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 133 (371)
.+.++.+|+|..|||++...... .. ...||||||||||..+|+|+.++|+..+.+.+... .....++.
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~-----~~~~~~~~ 116 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFP-----KDRQDVKD 116 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcc-----cchHHHHH
Confidence 44558888999999998876652 22 47899999999999999999999999998877632 22257899
Q ss_pred HHHHHHH-HHhHHHHHHHHhccCcCCCCceeEEEEEecC-EEEEEEeccceEEEeeCC-ceeecCCCCCCCCCCCCCHHH
Q 017430 134 ALQEAFE-NVDMKLLNRLEMNAEEDESGATATVMFIGRD-ILFISHVGDCCVVLSRTG-KADVLTNPHRPYGSGQVSLQE 210 (371)
Q Consensus 134 ~L~~a~~-~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~-~l~vanvGDSra~l~r~g-~~~~lT~dH~~~~~~~~~~~E 210 (371)
++.++|. ++|..++.. ......+|||++++++.++ ++|+||+|||||+|++.| ++++||.||+|++ ++|
T Consensus 117 a~~~~F~~~~D~~~~~~---~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~-----~~E 188 (330)
T KOG0698|consen 117 ALRRAFLTKTDSEFLEK---REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDR-----EDE 188 (330)
T ss_pred HHHHHHHHHHHHHHHhh---ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCc-----HHH
Confidence 9999999 699999875 2234678888888888755 999999999999999866 8999999999987 899
Q ss_pred HHHHHHcCCEEec----CeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecC
Q 017430 211 IRRIREAGGWISN----GRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS 286 (371)
Q Consensus 211 ~~Ri~~~gg~v~~----~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~ 286 (371)
+.||.++||+|.. .|+.|.|+++|||||+.+|. ++|+++|++....+.+
T Consensus 189 ~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~---------------------------~~v~a~Pei~~~~~~~ 241 (330)
T KOG0698|consen 189 RERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKS---------------------------QGVIAEPEIQQVKINS 241 (330)
T ss_pred HHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcC---------------------------CcEecCCceEEEEcCC
Confidence 9999999999994 39999999999999999983 6789999999999999
Q ss_pred CCeEEEEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCch
Q 017430 287 DAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVE 354 (371)
Q Consensus 287 ~~d~liL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~ 354 (371)
.++||||+||||||.++++|++++|+..+.....+..++..|.+.|..+++.||||||||.|......
T Consensus 242 ~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~ 309 (330)
T KOG0698|consen 242 DDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKS 309 (330)
T ss_pred CCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCcccc
Confidence 88999999999999999999999999877667799999999999999999999999999999888643
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=4.3e-47 Score=354.10 Aligned_cols=246 Identities=42% Similarity=0.613 Sum_probs=208.2
Q ss_pred eEeEEecCCCCCCCCceEEEeecC-----CCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHH
Q 017430 60 RWGSVSLQGLREEMEDGAVIQSDG-----LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKA 134 (371)
Q Consensus 60 ~~~~~s~~G~r~~nED~~~v~~~~-----~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 134 (371)
.+++.+.+|.|+.|||.+++.... .....+|+|||||||..++++++..+.+.+.+.+... ....+.++
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~------~~~~~~~a 74 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFN------DGNDIEEA 74 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHH------TCHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccc------cccchhhc
Confidence 378899999999999999887633 3567899999999999999999999998777665432 11278899
Q ss_pred HHHHHHH-HhHHHHHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEEEeeCCcee-ecCCCCCCCCCCCCCHHHHH
Q 017430 135 LQEAFEN-VDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKAD-VLTNPHRPYGSGQVSLQEIR 212 (371)
Q Consensus 135 L~~a~~~-~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~-~lT~dH~~~~~~~~~~~E~~ 212 (371)
|..+|.+ +++.+....+.. ....+|||++++++.++++|+||+||||+|+++.+... +||.||+|.+ +.|..
T Consensus 75 l~~a~~~~~~~~~~~~~~~~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~-----~~E~~ 148 (254)
T PF00481_consen 75 LRQAFLAFTDESLYSDSENN-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSN-----PDERE 148 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTS-----HHHHH
T ss_pred ccceeeeccccccccccccc-ccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccch-----hhccc
Confidence 9999999 888888744333 67789999999999999999999999999999999888 9999999987 89999
Q ss_pred HHHHcCCEEe-cCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEE
Q 017430 213 RIREAGGWIS-NGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFV 291 (371)
Q Consensus 213 Ri~~~gg~v~-~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~l 291 (371)
||+++||.+. .+|+.|.+++||+|||..+|++. +++|+++|++..+++.++++||
T Consensus 149 RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~------------------------~~~v~~~P~i~~~~l~~~d~fl 204 (254)
T PF00481_consen 149 RIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPG------------------------KPGVIAEPDISEVDLTPDDEFL 204 (254)
T ss_dssp HHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCT------------------------SSSSB---EEEEEEEBTTEEEE
T ss_pred eeeccccccccchhhhhccccccccccccccccc------------------------cceeeeecccccccccccceEE
Confidence 9999999999 89999999999999999998421 3689999999999999997799
Q ss_pred EEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCc
Q 017430 292 LLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNI 341 (371)
Q Consensus 292 iL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNi 341 (371)
|||||||||+++++++++++++.......++.+|+.|++.|+++|+.|||
T Consensus 205 vlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 205 VLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp EEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTHHSHE
T ss_pred EEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999987776668999999999999999999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-43 Score=326.15 Aligned_cols=250 Identities=26% Similarity=0.386 Sum_probs=210.8
Q ss_pred CCCceeEeEEecCCC-CCCCCceEEEeecCCCC-eeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHH
Q 017430 55 GVAGIRWGSVSLQGL-REEMEDGAVIQSDGLDG-FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIK 132 (371)
Q Consensus 55 ~~~~~~~~~~s~~G~-r~~nED~~~v~~~~~~~-~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 132 (371)
....+.+...+..|. |.+|||++.+....... ..+++|||||||+.+++++++.+.+.+.+.+......... ....
T Consensus 4 ~~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~--~~~~ 81 (262)
T COG0631 4 GILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLN--ESLE 81 (262)
T ss_pred ccceeeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccc--hhHH
Confidence 345567788888886 88999999887643111 4699999999999999999999999999988753211111 1178
Q ss_pred HHHHHHHHHHhHHHHHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHHHH
Q 017430 133 KALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIR 212 (371)
Q Consensus 133 ~~L~~a~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E~~ 212 (371)
+.|.+++..+++.|............+|||++++++.++++|+|||||||+|++|+|+++|||.||++.+ ..+..
T Consensus 82 ~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~-----~~~~~ 156 (262)
T COG0631 82 ELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVN-----RLEQR 156 (262)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHH-----HHHHh
Confidence 9999999999999998765556778999999999999999999999999999999999999999999976 66676
Q ss_pred HHHHcCCEEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEEE
Q 017430 213 RIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVL 292 (371)
Q Consensus 213 Ri~~~gg~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~li 292 (371)
++...++....+|.+ .+|||||+..+ +.|++...++.++ |++|
T Consensus 157 ~~~~~~~~~~~~~~~---~ltralG~~~~---------------------------------~~p~~~~~~~~~~-d~ll 199 (262)
T COG0631 157 GIITPEEARSHPRRN---ALTRALGDFDL---------------------------------LEPDITELELEPG-DFLL 199 (262)
T ss_pred cCCCHHHHHhCccch---hhhhhcCCCcc---------------------------------cceeEEEEEcCCC-CEEE
Confidence 666655555555544 78899988663 5699999999999 9999
Q ss_pred EEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 017430 293 LASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYAS 352 (371)
Q Consensus 293 L~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~ 352 (371)
||||||||.++++++.++++ ...+++++++.|++.|+++++.||+|+|+|.+....
T Consensus 200 L~SDGl~d~v~~~~i~~il~----~~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 200 LCSDGLWDVVSDDEIVDILK----NSETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred EECCCCccCcCHHHHHHHHh----cCCCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 99999999999999999995 478999999999999999999999999999998765
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-43 Score=330.86 Aligned_cols=255 Identities=30% Similarity=0.433 Sum_probs=211.9
Q ss_pred CCCCCceEEEeecCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCC-----------------------
Q 017430 70 REEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGK----------------------- 126 (371)
Q Consensus 70 r~~nED~~~v~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~----------------------- 126 (371)
.+..||++-+.....+++.|+||||||||..+++|++++|+.++...|+......+.
T Consensus 82 ~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~ 161 (390)
T KOG0700|consen 82 GKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSS 161 (390)
T ss_pred CCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccc
Confidence 445789987766667889999999999999999999999999999777652221111
Q ss_pred --C-hHHHHHHHHHHHHHHhHHHHHHHHh----ccCcCCCCceeEEEEEecCEEEEEEeccceEEEee---CC---ceee
Q 017430 127 --D-FDAIKKALQEAFENVDMKLLNRLEM----NAEEDESGATATVMFIGRDILFISHVGDCCVVLSR---TG---KADV 193 (371)
Q Consensus 127 --~-~~~~~~~L~~a~~~~~~~l~~~~~~----~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r---~g---~~~~ 193 (371)
. ...+.++|.+||.+++++|+.+... .+....+|||+++.++.++.|||||+|||||+|.+ +| .++|
T Consensus 162 ~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~q 241 (390)
T KOG0700|consen 162 ADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQ 241 (390)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEe
Confidence 1 4678999999999999999876643 35677899999999999999999999999999974 33 5799
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHcCC----EEec--CeeeccccccccccCcccccchhhhhhcccCCCccccchhhccc
Q 017430 194 LTNPHRPYGSGQVSLQEIRRIREAGG----WISN--GRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQ 267 (371)
Q Consensus 194 lT~dH~~~~~~~~~~~E~~Ri~~~gg----~v~~--~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~ 267 (371)
||.||+.++ ++|..||+..|- .|.. +||+|.|.+||||||.++|..+-+.. .-.+.|+.+..
T Consensus 242 LS~dHn~~n-----e~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e-------~l~~~fr~~~~ 309 (390)
T KOG0700|consen 242 LSTDHNASN-----EDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQE-------PLLEKFRIPYI 309 (390)
T ss_pred cChhhcccc-----HHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccc-------hhHhhcCCCCC
Confidence 999999987 999999999984 4444 49999999999999999995432210 00126788888
Q ss_pred cCCCcEEeecEEEEEEecCCCeEEEEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcC
Q 017430 268 LNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQH 336 (371)
Q Consensus 268 ~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g 336 (371)
.++|+++++|+++.++|.+.|.||||+||||||+|+++|++++|.+.+....+-+.+|+.|++.|+.+.
T Consensus 310 ~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 310 GTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred CCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999887664555788899999887643
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-43 Score=324.24 Aligned_cols=180 Identities=36% Similarity=0.641 Sum_probs=167.5
Q ss_pred cCCCCceeEEEEEecCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHHHHHHHHcCCEEe-cCeeeccccccc
Q 017430 156 EDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWIS-NGRICGDIAVSR 234 (371)
Q Consensus 156 ~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~gg~v~-~~rv~G~l~~sr 234 (371)
...+|||++||++.+.+|||||.||||++|.|+|+++-++.||+|.+ ..|..||.++||.|. +|||+|.|+++|
T Consensus 327 G~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPED-----evE~~RI~~AGG~vtlDGRVNGGLNLSR 401 (542)
T KOG0699|consen 327 GEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPED-----EVETNRIHAAGGQVTLDGRVNGGLNLSR 401 (542)
T ss_pred CCCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCccc-----HHHHHHHHhcCCeEeecceecCccchhh
Confidence 45689999999999999999999999999999999999999999987 799999999999999 899999999999
Q ss_pred cccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEEEEEcCcccccCChHHHHHHHHHH
Q 017430 235 AFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQ 314 (371)
Q Consensus 235 a~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~ 314 (371)
||||..||++.+ +++..+.|++-|+|....|.+.++|+||++||+|++|+.++++++|+..
T Consensus 402 A~GDHaYK~N~~-------------------Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~ 462 (542)
T KOG0699|consen 402 AFGDHAYKKNQE-------------------LPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDL 462 (542)
T ss_pred hhhhhhhhcccC-------------------CChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHH
Confidence 999999997654 5666789999999999999999999999999999999999999999999
Q ss_pred HHccCCHHHHHHHHHHHHHhc------CCCCCcEEEEEEcCCCCchhhHHH
Q 017430 315 LQQHGDVQLACEALAQAALDQ------HSQDNISIVIADLGYASVELMRSI 359 (371)
Q Consensus 315 l~~~~~~~~~a~~L~~~A~~~------g~~DNiTvIvv~l~~~~~~~~~~~ 359 (371)
|..+.....+|+.|.+.++.- -+.||+|||++.|.+...+++|..
T Consensus 463 l~~n~~ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk~~elqpnq 513 (542)
T KOG0699|consen 463 LAKNSSLSEICEELCDACLAPSTDGDGTGCDNMTVIITTFKRKSKELQPNQ 513 (542)
T ss_pred HhcCchHHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccchhhcCCcc
Confidence 999999999999999999873 366999999999998888887655
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.1e-39 Score=298.29 Aligned_cols=251 Identities=38% Similarity=0.587 Sum_probs=217.6
Q ss_pred eEeEEecCCCCCCCCceEEEeecCC-CCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHHH
Q 017430 60 RWGSVSLQGLREEMEDGAVIQSDGL-DGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEA 138 (371)
Q Consensus 60 ~~~~~s~~G~r~~nED~~~v~~~~~-~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~a 138 (371)
.++..+.+|.|+.|||++++..... .++.+|+|||||||+..++++++.+.+.+.+.+..... .....+...|.++
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~---~~~~~~~~~l~~~ 78 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLT---LSEEDIEEALRKA 78 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccc---cchHHHHHHHHHH
Confidence 4567788888999999999866421 25679999999999999999999999999887764321 2356788899999
Q ss_pred HHHHhHHHHHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHHHHHHHHcC
Q 017430 139 FENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAG 218 (371)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~g 218 (371)
|.++++.+............+|||++++++.++.++++|+||||+|++++++++++|.||++.+ +.|..||...+
T Consensus 79 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~-----~~~~~~i~~~~ 153 (254)
T cd00143 79 FLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVN-----EEERERIEKAG 153 (254)
T ss_pred HHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcC-----hHHHHHHHHcC
Confidence 9999999988765545667899999999999999999999999999999999999999999976 78999999999
Q ss_pred CEEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEe-cCCCeEEEEEcCc
Q 017430 219 GWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSL-GSDAEFVLLASDG 297 (371)
Q Consensus 219 g~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l-~~~~d~liL~SDG 297 (371)
|++...+..+...++|+||+..+| +++..+|++..+++ .++ ++|||||||
T Consensus 154 ~~~~~~~~~~~~~~t~~lG~~~~~----------------------------~~~~~~~~~~~~~l~~~~-d~ill~SDG 204 (254)
T cd00143 154 GRVSNGRVPGVLAVTRALGDFDLK----------------------------PGVSAEPDVTVVKLTEDD-DFLILASDG 204 (254)
T ss_pred CcEEeCEEcCceeeccccCCcccc----------------------------CCEEcCCeEEEEEeCCCC-cEEEEECCC
Confidence 998888888899999999998876 45678899999999 777 999999999
Q ss_pred ccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEc
Q 017430 298 LWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADL 348 (371)
Q Consensus 298 l~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l 348 (371)
|||+++++++.+++..... ..+++++|+.|++.|..+++.||+|+|++++
T Consensus 205 ~~~~l~~~~i~~~~~~~~~-~~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 205 LWDVLSNQEAVDIVRSELA-KEDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred CeeccChHHHHHHHHHHhc-ccCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 9999999999999964210 0279999999999999999999999999975
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.3e-38 Score=294.06 Aligned_cols=250 Identities=41% Similarity=0.661 Sum_probs=216.3
Q ss_pred ceeEeEEecCCCCCCCCceEEEeecCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHH
Q 017430 58 GIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQE 137 (371)
Q Consensus 58 ~~~~~~~s~~G~r~~nED~~~v~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~ 137 (371)
.+.++..+.+|.|..|||++++......+..+++|||||||..+++++++.+.+.+.+..... ......+.+.|.+
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~ 80 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKH----KDELEDVEEALRK 80 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhc----ccchhHHHHHHHH
Confidence 456677788889999999998876433567899999999999999999999998877654321 1122468889999
Q ss_pred HHHHHhHHHHHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHHHHHHHHc
Q 017430 138 AFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREA 217 (371)
Q Consensus 138 a~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~ 217 (371)
++.++++.+............+|||++++++.++++|++|+||||+|++|++++.++|.||++.+ ..|..||...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~-----~~~~~~i~~~ 155 (255)
T smart00332 81 AFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSN-----EDERARIEAA 155 (255)
T ss_pred HHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcC-----HHHHHHHHHc
Confidence 99999999988765555567799999999999999999999999999999999999999999976 7899999999
Q ss_pred CCEEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEe-cCCCeEEEEEcC
Q 017430 218 GGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSL-GSDAEFVLLASD 296 (371)
Q Consensus 218 gg~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l-~~~~d~liL~SD 296 (371)
|+.+..++..+...++|++|+..+| +++...|++...++ .++ ++||||||
T Consensus 156 ~~~~~~~~~~~~~~lt~~~g~~~~~----------------------------~~i~~~p~~~~~~~~~~~-d~ill~SD 206 (255)
T smart00332 156 GGFVINGRVNGVLALSRAIGDFFLK----------------------------PYVSAEPDVTVVELTEKD-DFLILASD 206 (255)
T ss_pred CCEEECCeECCeEecccccCCHhhc----------------------------CCeEeeeEEEEEEecCCC-cEEEEECC
Confidence 9999999999999999999998776 67789999999996 776 99999999
Q ss_pred cccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 017430 297 GLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIA 346 (371)
Q Consensus 297 Gl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv 346 (371)
||||+++++++.+++.+.... .+++++|+.|++.|..++..||+|+||+
T Consensus 207 Gv~~~l~~~~i~~~~~~~~~~-~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 207 GLWDVLSNQEVVDIVRKHLSK-SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred ccccCCCHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 999999999999999753222 3689999999999999999999999985
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=2.2e-37 Score=317.08 Aligned_cols=249 Identities=20% Similarity=0.219 Sum_probs=187.7
Q ss_pred ceeEeEEecCCC-CCCCCceEEEeecC----------CCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCC
Q 017430 58 GIRWGSVSLQGL-REEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGK 126 (371)
Q Consensus 58 ~~~~~~~s~~G~-r~~nED~~~v~~~~----------~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~ 126 (371)
.+.+++.|++|. |++|||++.+.... ..+..+|+|||||||+.+++.+++.+.+.+.+.+.... ...
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~--~~~ 451 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHW--QDE 451 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhh--ccc
Confidence 477889999997 99999998765321 01346899999999999888888888887776654321 111
Q ss_pred ChHHHHHHHHHHHHHHhHHHHHHHHhcc--CcCCCCceeEEEEEecCEEEEEEeccceEEEe-eCCceeecCCCCCCCCC
Q 017430 127 DFDAIKKALQEAFENVDMKLLNRLEMNA--EEDESGATATVMFIGRDILFISHVGDCCVVLS-RTGKADVLTNPHRPYGS 203 (371)
Q Consensus 127 ~~~~~~~~L~~a~~~~~~~l~~~~~~~~--~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~-r~g~~~~lT~dH~~~~~ 203 (371)
...+..|.++|..+|+.|........ ....||||++++++.++++|++||||||+|++ |+|++++||.||++.
T Consensus 452 --~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~-- 527 (645)
T PRK14559 452 --LPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVG-- 527 (645)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHH--
Confidence 12356799999999999987654333 44579999999999999999999999999988 578999999999983
Q ss_pred CCCCHHHHHHHHHcCC--EEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEE
Q 017430 204 GQVSLQEIRRIREAGG--WISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQ 281 (371)
Q Consensus 204 ~~~~~~E~~Ri~~~gg--~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~ 281 (371)
..++ +.|- ....+| .+...+|||+|+...+ ..+|++..
T Consensus 528 ----~~lv----~~Gi~~~~a~~~-p~~~~LTrALG~~~~~-------------------------------~l~Pdi~~ 567 (645)
T PRK14559 528 ----QREI----QRGVEPQIAYAR-PDAYQLTQALGPRDNS-------------------------------AIQPDIQF 567 (645)
T ss_pred ----HHHH----HhCCCHHHHhcC-cccceeeeccCCCCCC-------------------------------cccceEEE
Confidence 1222 2330 000122 2346788999885443 25699999
Q ss_pred EEecCCCeEEEEEcCccccc-CChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCc
Q 017430 282 VSLGSDAEFVLLASDGLWDY-MNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASV 353 (371)
Q Consensus 282 ~~l~~~~d~liL~SDGl~d~-l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~ 353 (371)
+.+.++ ++||||||||||+ +-+....+.+...+....+++++++.|++.|+++|+.||||+|||++.....
T Consensus 568 ~~L~~g-D~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~ 639 (645)
T PRK14559 568 LEIEED-TLLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQ 639 (645)
T ss_pred EEcCCC-CEEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCC
Confidence 999987 9999999999994 3333334444455566779999999999999999999999999999976543
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-30 Score=238.06 Aligned_cols=240 Identities=26% Similarity=0.395 Sum_probs=190.9
Q ss_pred CeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCc----------------cC----------------CCCChHHHHH
Q 017430 86 GFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGL----------------LL----------------SGKDFDAIKK 133 (371)
Q Consensus 86 ~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~----------------~~----------------~~~~~~~~~~ 133 (371)
+..+|-+||||.|..+|-.+++.+.+.+.+.+++-. .. ......-+..
T Consensus 143 ~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViG 222 (493)
T KOG1323|consen 143 DGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIG 222 (493)
T ss_pred cceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhHH
Confidence 457999999999999999999988888776665200 00 0011234678
Q ss_pred HHHHHHHHHhHHHHHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHHHHH
Q 017430 134 ALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRR 213 (371)
Q Consensus 134 ~L~~a~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E~~R 213 (371)
+|+.||+.+|++|.+ +...-...+|||+++++.--+++|+||.||||++++|++++++|+.+-+| +.|++|
T Consensus 223 AlEsAFqemDeqiar--er~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTP-------etERqR 293 (493)
T KOG1323|consen 223 ALESAFQEMDEQIAR--ERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP-------ETERQR 293 (493)
T ss_pred HHHHHHHHHHHHHHH--HHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCc-------HHHHHH
Confidence 999999999999987 34455678999999999999999999999999999999999999999999 789999
Q ss_pred HHHcC-------------------------------------CEEe------------------cCeeeccccccccccC
Q 017430 214 IREAG-------------------------------------GWIS------------------NGRICGDIAVSRAFGD 238 (371)
Q Consensus 214 i~~~g-------------------------------------g~v~------------------~~rv~G~l~~sra~Gd 238 (371)
|+..+ ||.- +.|+.+.+.|||.|||
T Consensus 294 lQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGD 373 (493)
T KOG1323|consen 294 LQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGD 373 (493)
T ss_pred HHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCc
Confidence 97742 1211 1266778999999999
Q ss_pred cccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecC----CCeEEEEEcCcccccCChHHHHHHHHHH
Q 017430 239 IRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS----DAEFVLLASDGLWDYMNSSDAVKFVRNQ 314 (371)
Q Consensus 239 ~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~----~~d~liL~SDGl~d~l~~~ei~~~v~~~ 314 (371)
..+|. ..++.+-+|++++.|+++.++|.+ .||++||+||||||.++++|+..+|+.+
T Consensus 374 H~Lkv-------------------~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~ 434 (493)
T KOG1323|consen 374 HHLKV-------------------VDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSF 434 (493)
T ss_pred ceeee-------------------ecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHh
Confidence 99883 334455578889999999999865 2689999999999999999999999998
Q ss_pred HHccC--CHH---HHHHHHHHHHHh-------------cCCCCCcEEEEEEcCCCCc
Q 017430 315 LQQHG--DVQ---LACEALAQAALD-------------QHSQDNISIVIADLGYASV 353 (371)
Q Consensus 315 l~~~~--~~~---~~a~~L~~~A~~-------------~g~~DNiTvIvv~l~~~~~ 353 (371)
|.... +|. .+|+.|+..|.. .|+.|||||.|+.|.....
T Consensus 435 L~~~dp~Dp~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~ 491 (493)
T KOG1323|consen 435 LPSTDPADPSRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAA 491 (493)
T ss_pred cCCCCCCChhHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCCCC
Confidence 86654 343 567778877743 2567999999999987653
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-28 Score=226.33 Aligned_cols=206 Identities=19% Similarity=0.296 Sum_probs=161.6
Q ss_pred CCCceEEEeecCCCCeeEEEEecCCCChh----HHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHHhHHHH
Q 017430 72 EMEDGAVIQSDGLDGFSFAAVFDGHGGVS----TVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLL 147 (371)
Q Consensus 72 ~nED~~~v~~~~~~~~~~~~V~DG~GG~~----~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~a~~~~~~~l~ 147 (371)
..||+|++..+. ...+.|||||+|||. -....+++|++.+.+..+. ......++..+|.+|+.++
T Consensus 90 ~GEDa~Fvss~~--~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~----~~~~~~~P~~lL~~ay~~l----- 158 (330)
T KOG1379|consen 90 GGEDAWFVSSNP--HAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQN----SDFNPSDPVNLLEKAYAEL----- 158 (330)
T ss_pred CCCcceeeccCc--ccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcc----cccCCCChHHHHHHHHHHH-----
Confidence 589999997753 335999999999998 2334466777777777764 4556668899999999888
Q ss_pred HHHHhccCcCCCCceeEEEEEe--cCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHHHHHHHHcCCEEecCe
Q 017430 148 NRLEMNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGR 225 (371)
Q Consensus 148 ~~~~~~~~~~~~GsTa~vv~i~--~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~gg~v~~~r 225 (371)
........++|||+++.++ +++||+||+|||.+.++|+|+++.-|..+.+++|
T Consensus 159 ---~~~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN---------------------- 213 (330)
T KOG1379|consen 159 ---KSQKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFN---------------------- 213 (330)
T ss_pred ---hhcCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccC----------------------
Confidence 3344556689999999998 8899999999999999999999999999988764
Q ss_pred eeccccccccccCcccccchhhhhhcccCCCccccchhhccccCC--CcEE---eecEEEEEEecCCCeEEEEEcCcccc
Q 017430 226 ICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNK--DLVI---ASPDIFQVSLGSDAEFVLLASDGLWD 300 (371)
Q Consensus 226 v~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~v~---~~p~i~~~~l~~~~d~liL~SDGl~d 300 (371)
.+|+.+.+|.+ .++. -..+.+.+++++| |+|||+||||||
T Consensus 214 ----------------------------------~PyQLs~~p~~~~~~~~d~p~~ad~~~~~v~~G-DvIilATDGlfD 258 (330)
T KOG1379|consen 214 ----------------------------------TPYQLSSPPEGYSSYISDVPDSADVTSFDVQKG-DVIILATDGLFD 258 (330)
T ss_pred ----------------------------------CceeeccCCccccccccCCccccceEEEeccCC-CEEEEecccccc
Confidence 11222222110 0011 2357889999999 999999999999
Q ss_pred cCChHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHhc-----------------------CCCCCcEEEEEEc
Q 017430 301 YMNSSDAVKFVRNQLQ-QHGDVQLACEALAQAALDQ-----------------------HSQDNISIVIADL 348 (371)
Q Consensus 301 ~l~~~ei~~~v~~~l~-~~~~~~~~a~~L~~~A~~~-----------------------g~~DNiTvIvv~l 348 (371)
+|.+++|.+++..... ...++|..|+.|++.|... |..||||+||..+
T Consensus 259 Nl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 259 NLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 9999999999987766 5678999999999999763 4579999999753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.88 E-value=4.4e-22 Score=204.48 Aligned_cols=246 Identities=23% Similarity=0.338 Sum_probs=203.1
Q ss_pred CceeEeEEecCCCCCCCCceEEEeec-CCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHH
Q 017430 57 AGIRWGSVSLQGLREEMEDGAVIQSD-GLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKAL 135 (371)
Q Consensus 57 ~~~~~~~~s~~G~r~~nED~~~v~~~-~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L 135 (371)
.-+.+|++-..|.|..+--+.....+ ..+....|+++||-+......++...+.+++.+.++.. .+ -.+.|
T Consensus 520 ~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~-----~~---et~~m 591 (1081)
T KOG0618|consen 520 FLWTYGVAGVSGQRNKVCSRAVWVENFFLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLY-----GN---ETEQM 591 (1081)
T ss_pred eheeeccchhcccccchhhhhhhhhhcccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhc-----cC---hHHHH
Confidence 45668888888887765444322222 23445799999999999999999999999999888742 11 12349
Q ss_pred HHHHHHHhHHHHHHHHhccCcCCCCceeEEEEEec--------CEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCC
Q 017430 136 QEAFENVDMKLLNRLEMNAEEDESGATATVMFIGR--------DILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVS 207 (371)
Q Consensus 136 ~~a~~~~~~~l~~~~~~~~~~~~~GsTa~vv~i~~--------~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~ 207 (371)
+++|...++++-.. ....|..++.+.|.. .++++||+|+|.++++++|+-.++|+-....- .
T Consensus 592 r~~fl~~~rklg~~------g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v----~ 661 (1081)
T KOG0618|consen 592 RNTFLRLNRKLGEE------GQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEV----D 661 (1081)
T ss_pred HHHHHHHhhhhhhh------hccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccC----C
Confidence 99999999998442 233455555566653 37999999999999999999998887764431 2
Q ss_pred HHHHHHHHHcCCEEe-cCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecC
Q 017430 208 LQEIRRIREAGGWIS-NGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS 286 (371)
Q Consensus 208 ~~E~~Ri~~~gg~v~-~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~ 286 (371)
++|++||+..+|+|. +++++|+...||++|.+.+. |+|.+.|++..+.|.+
T Consensus 662 ~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~----------------------------P~v~p~Phv~~~~Lt~ 713 (1081)
T KOG0618|consen 662 REEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLF----------------------------PHVLPDPHVSVVILTE 713 (1081)
T ss_pred HHHHHHHHHhcCeecCCCeeeceeeeeeeccccccc----------------------------ccccCCCceeeEeccc
Confidence 899999999999999 89999999999999998887 6788999999999999
Q ss_pred CCeEEEEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 017430 287 DAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYAS 352 (371)
Q Consensus 287 ~~d~liL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~ 352 (371)
.|++|||++-+||++|+-+++++.++ +..+|-.+|.+|.+.|...|+.||++|+||++....
T Consensus 714 qdE~LIvgn~~lW~~Lsid~a~~~vR----n~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 714 QDEFLIVGNKQLWSVLSIDTAVDAVR----NVEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred CceEEEEcchHHhhhccHHHHHHHHh----cCCchHHHHHHHHHHHHhcccccCeeEEEEEeecch
Confidence 99999999999999999999999996 678999999999999999999999999999996544
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.85 E-value=9.4e-21 Score=171.55 Aligned_cols=188 Identities=21% Similarity=0.291 Sum_probs=109.1
Q ss_pred EecCCCCCCCCceEEEeecCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHH-HHHHHHHHHHHH
Q 017430 64 VSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDA-IKKALQEAFENV 142 (371)
Q Consensus 64 ~s~~G~r~~nED~~~v~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~L~~a~~~~ 142 (371)
.+++|.++.|||++.+... .+..+++|+||+||...++.+++.+++.+.+.+.... ...... .+..++.+..++
T Consensus 3 ~sh~~~~~~nqD~~~~~~~--~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~ 77 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD--DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLL---SQESPSSIEALIRAIKKEI 77 (212)
T ss_dssp ----TTSSS--EEEEEE-T--CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC--CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcc---cccchHHHHHHHHHHHHHH
Confidence 5788999999999997654 3335779999999999888888888888888877532 111112 333334333333
Q ss_pred hHHH---HHHHHhccCcCCCCceeEEEEEecCEEEEEEeccceEE-EeeCCceeecCCCCCCCCCCCCCHHHHHHHHHcC
Q 017430 143 DMKL---LNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVV-LSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAG 218 (371)
Q Consensus 143 ~~~l---~~~~~~~~~~~~~GsTa~vv~i~~~~l~vanvGDSra~-l~r~g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~g 218 (371)
...+ .............+||++++++.++.++++|+||||+| +.++|++.+++.+|+.. ...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~---------~~~----- 143 (212)
T PF13672_consen 78 LSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGE---------YPN----- 143 (212)
T ss_dssp HHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHH---------HHH-----
T ss_pred HHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccch---------hhh-----
Confidence 3222 01112344667789999999999999999999999996 46899999999999731 111
Q ss_pred CEEecCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEEEEEcCcc
Q 017430 219 GWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGL 298 (371)
Q Consensus 219 g~v~~~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl 298 (371)
.++.+..... ....++..+++.++ +.|+||||||
T Consensus 144 -------------~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~-d~ilL~SDG~ 177 (212)
T PF13672_consen 144 -------------QTRSLTGDDP--------------------------------EPDVQYGSIPLEEG-DVILLCSDGV 177 (212)
T ss_dssp -------------CTTSCCHHCC--------------------------------CTETEEEEEE--TT--EEEEE-HHH
T ss_pred -------------hhhccCcccc--------------------------------ccCCeEEEEEcCCC-CEEEEECcCc
Confidence 1111111100 12236777888888 9999999999
Q ss_pred cccCChHH-HHHHHHHHHH
Q 017430 299 WDYMNSSD-AVKFVRNQLQ 316 (371)
Q Consensus 299 ~d~l~~~e-i~~~v~~~l~ 316 (371)
|+.+.+.+ +..++.+.+.
T Consensus 178 ~~~l~~~~~~~~~l~~~~~ 196 (212)
T PF13672_consen 178 WDNLRSYEDLEQFLKDLWN 196 (212)
T ss_dssp HTTS-HHHHHHHH------
T ss_pred cccCCCHHHHHHHhhhccc
Confidence 99998655 6677765443
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.75 E-value=3.4e-16 Score=139.59 Aligned_cols=175 Identities=16% Similarity=0.108 Sum_probs=129.5
Q ss_pred CCCCceEEEeecCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHHhHHHHHHH
Q 017430 71 EEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRL 150 (371)
Q Consensus 71 ~~nED~~~v~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~a~~~~~~~l~~~~ 150 (371)
..+.|.+.+... .++..+++|+||||+...|.+++..+...+.+.+... ..+.+.+..+++.+...
T Consensus 15 ~~~GD~~~~~~~-~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~------------~~~~~~l~~~n~~l~~~- 80 (193)
T smart00331 15 QVGGDFYDVVKL-PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG------------ISLSQILERLNRAIYEN- 80 (193)
T ss_pred hcCccEEEEEEe-CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC------------CCHHHHHHHHHHHHHhc-
Confidence 457899877665 3556799999999988888888888888877665431 12444556666666542
Q ss_pred HhccCcCCCCceeEEEEE--ecCEEEEEEeccceEEEee-CCceeecCCCCCCCCCCCCCHHHHHHHHHcCCEEecCeee
Q 017430 151 EMNAEEDESGATATVMFI--GRDILFISHVGDCCVVLSR-TGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRIC 227 (371)
Q Consensus 151 ~~~~~~~~~GsTa~vv~i--~~~~l~vanvGDSra~l~r-~g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~gg~v~~~rv~ 227 (371)
....+|+|++++++ .+++++++|+||+++|+++ ++...+++.+.++
T Consensus 81 ----~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~~--------------------------- 129 (193)
T smart00331 81 ----GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLGA--------------------------- 129 (193)
T ss_pred ----CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCCc---------------------------
Confidence 24568999999998 5789999999999999998 6666666654332
Q ss_pred ccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEEEEEcCcccccCChHHH
Q 017430 228 GDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDA 307 (371)
Q Consensus 228 G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d~l~~~ei 307 (371)
.+|... ...++...+++.++ |.|+|+||||||.++++++
T Consensus 130 -------~lG~~~---------------------------------~~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~l 168 (193)
T smart00331 130 -------PLGLEP---------------------------------DVEVDVRELTLEPG-DLLLLYTDGLTEARNPERL 168 (193)
T ss_pred -------eeeeCC---------------------------------CCcceeEEEeeCCC-CEEEEECCCccccCChHHH
Confidence 122111 12366778899999 9999999999999999999
Q ss_pred HHHHHHHHHccCCHHHHHHHHHHHHH
Q 017430 308 VKFVRNQLQQHGDVQLACEALAQAAL 333 (371)
Q Consensus 308 ~~~v~~~l~~~~~~~~~a~~L~~~A~ 333 (371)
.+++.+. ...++++++++|.+.+.
T Consensus 169 ~~~l~~~--~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 169 EELLEEL--LGSPPAEIAQRILEELL 192 (193)
T ss_pred HHHHHHh--cCCCHHHHHHHHHHHHh
Confidence 9888753 23578888988887764
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.64 E-value=2.8e-14 Score=151.29 Aligned_cols=194 Identities=18% Similarity=0.214 Sum_probs=140.1
Q ss_pred cCCCCCCCCceEEEeecCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHHhHH
Q 017430 66 LQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMK 145 (371)
Q Consensus 66 ~~G~r~~nED~~~v~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~a~~~~~~~ 145 (371)
.++.+..+.|.+.+... .++...++|+||+|+...|...+..+.+.+.+.+..+ .+ ...++..+|+.
T Consensus 560 ~k~g~~vsGD~y~~~~l-~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g-----~~-------~~~ai~~lN~~ 626 (764)
T TIGR02865 560 AKDGELVSGDSYSFGKL-SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG-----FD-------REVAIKTVNSI 626 (764)
T ss_pred cCCCCcccCceEEEEEE-CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC-----CC-------HHHHHHHHHHH
Confidence 34446779999877654 3566789999999977766677777766665554432 11 24566667766
Q ss_pred HHHHHHhccCcCCCCceeEEEEEe--cCEEEEEEeccceEEEeeCCceeecCCCCCCCCCCCCCHHHHHHHHHcCCEEec
Q 017430 146 LLNRLEMNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISN 223 (371)
Q Consensus 146 l~~~~~~~~~~~~~GsTa~vv~i~--~~~l~vanvGDSra~l~r~g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~gg~v~~ 223 (371)
+... ....+.+|+.+++++ .+++.++|+|+++.|+.|++++.+++..+-|-
T Consensus 627 L~~~-----~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lPl---------------------- 679 (764)
T TIGR02865 627 LSLR-----STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLPI---------------------- 679 (764)
T ss_pred HHhC-----CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCcee----------------------
Confidence 5431 233568999988885 68999999999999999999998887665441
Q ss_pred CeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEEEEEcCcccccCC
Q 017430 224 GRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMN 303 (371)
Q Consensus 224 ~rv~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d~l~ 303 (371)
|.+. ..+++....++.+| |+|+++|||+||..+
T Consensus 680 ----Gil~------------------------------------------~~~~~~~~~~L~~G-D~Lll~SDGv~E~~~ 712 (764)
T TIGR02865 680 ----GILD------------------------------------------EVDVELVRKKLKNG-DLIVMVSDGVLEGEK 712 (764)
T ss_pred ----Eecc------------------------------------------CCccceEEEEeCCC-CEEEEECCCCCcCCc
Confidence 1110 12466778899999 999999999999887
Q ss_pred hHH-----HHHHHHHHHHccCCHHHHHHHHHHHHHhcC---CCCCcEEEEEEc
Q 017430 304 SSD-----AVKFVRNQLQQHGDVQLACEALAQAALDQH---SQDNISIVIADL 348 (371)
Q Consensus 304 ~~e-----i~~~v~~~l~~~~~~~~~a~~L~~~A~~~g---~~DNiTvIvv~l 348 (371)
+.+ +.+++.+ ....+|+++++.|++++.+.. ..||+|++++++
T Consensus 713 ~~~~~~~~l~~~l~~--~~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 713 EVEGKVLWLVRKLKE--TNTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred ccccHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 543 4444432 134589999999999998653 479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.54 E-value=2.2e-12 Score=114.78 Aligned_cols=178 Identities=22% Similarity=0.258 Sum_probs=117.9
Q ss_pred CCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHHhHHHHHHHHhccCcCCCCceeE
Q 017430 85 DGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATAT 164 (371)
Q Consensus 85 ~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~a~~~~~~~l~~~~~~~~~~~~~GsTa~ 164 (371)
++..+++|+|+.|..-.|.+++..+...+......+ .+ ..+.+..+|+.+..... .....+|++
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-----~~-------p~~~l~~ln~~l~~~~~----~~~~~~t~~ 65 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-----LD-------PEELLEALNRRLYRDLK----GDNRYATAC 65 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-----TS-------HHHHHHHHHHHHHHHTT----TTSTTEEEE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-----CC-------HHHHHHHHHHHHHHHhh----hccccceEE
Confidence 455789999999966666677777767766665432 12 44455555665543211 114778888
Q ss_pred EEEEe--cCEEEEEEeccceEEEeeC--CceeecCCCCCCCCCCCCCHHHHHHHHHcCCEEecCeeeccccccccccCcc
Q 017430 165 VMFIG--RDILFISHVGDCCVVLSRT--GKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIR 240 (371)
Q Consensus 165 vv~i~--~~~l~vanvGDSra~l~r~--g~~~~lT~dH~~~~~~~~~~~E~~Ri~~~gg~v~~~rv~G~l~~sra~Gd~~ 240 (371)
++.+. .++++++|+|++.++++++ +....+.....+. |-..
T Consensus 66 ~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~l-----------------------------------G~~~ 110 (193)
T PF07228_consen 66 YAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEGPPL-----------------------------------GIFE 110 (193)
T ss_dssp EEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSSBBC-----------------------------------SSSC
T ss_pred EEEecccceEEEEeCCCCCCEEEEeccccceeecccCccce-----------------------------------eeec
Confidence 88875 5689999999999999998 3444444433331 1100
Q ss_pred cccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEEEEEcCcccccCChHH-------HHHHHHH
Q 017430 241 FKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSD-------AVKFVRN 313 (371)
Q Consensus 241 ~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d~l~~~e-------i~~~v~~ 313 (371)
...+....+++.+| |.|+|+||||+|....+. +.+++.+
T Consensus 111 ---------------------------------~~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~ 156 (193)
T PF07228_consen 111 ---------------------------------DIDYQEQEIQLEPG-DRLLLYTDGLFEALNEDGEFFGEERLLELLDE 156 (193)
T ss_dssp ---------------------------------TTCEEEEEEE--TT-EEEEEECHHHCTTTCHHCHHCCCHHHHHHHHC
T ss_pred ---------------------------------cccccceEEEeccc-cEEEEeCCChhhccCCccchhHHHHHHHHHhh
Confidence 02345668889999 999999999999985443 2344432
Q ss_pred HHHccCCHHHHHHHHHHHHHhc---CCCCCcEEEEEEcC
Q 017430 314 QLQQHGDVQLACEALAQAALDQ---HSQDNISIVIADLG 349 (371)
Q Consensus 314 ~l~~~~~~~~~a~~L~~~A~~~---g~~DNiTvIvv~l~ 349 (371)
. ...++++.++.|.+.+... ...||+|||+++++
T Consensus 157 ~--~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 157 N--RGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp H--TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred c--cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 1 3467999999999999874 47799999999863
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.39 E-value=7.1e-05 Score=73.64 Aligned_cols=190 Identities=14% Similarity=0.080 Sum_probs=118.0
Q ss_pred CCCceEEEeecCCCCeeEEEEecCCCChhHHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHHhHHHHHHHH
Q 017430 72 EMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLE 151 (371)
Q Consensus 72 ~nED~~~v~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~a~~~~~~~l~~~~~ 151 (371)
-.-|.+-+..... ....++|.|..|-.-.|.+. ........+.+... ...++..+.+. +|+-+...
T Consensus 161 vGGD~yd~~~~~~-~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~---~~~~p~~~l~~-------~n~~~~~~-- 226 (367)
T COG2208 161 VGGDYYDFIQLGE-KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLES---GPLDPADVLET-------LNRVLKQN-- 226 (367)
T ss_pred cCCceEEEEEECC-cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhc---ccCCHHHHHHH-------HHHHHHhc--
Confidence 5678876655433 45688999999944333333 23333333333321 12233333333 33333221
Q ss_pred hccCcCCCCceeEEEEEe--cCEEEEEEeccceEEEeeCCce---eecCCCCCCCCCCCCCHHHHHHHHHcCCEEecCee
Q 017430 152 MNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKA---DVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRI 226 (371)
Q Consensus 152 ~~~~~~~~GsTa~vv~i~--~~~l~vanvGDSra~l~r~g~~---~~lT~dH~~~~~~~~~~~E~~Ri~~~gg~v~~~rv 226 (371)
....+-+|+...+++ .+.+.++|+|=--.++.+.+.. ..+...-
T Consensus 227 ---~~~~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~~g---------------------------- 275 (367)
T COG2208 227 ---LEEDMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTALG---------------------------- 275 (367)
T ss_pred ---ccCCcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccCCC----------------------------
Confidence 122267888888775 6789999999988888876532 3332221
Q ss_pred eccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCcEEeecEEEEEEecCCCeEEEEEcCcccc------
Q 017430 227 CGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWD------ 300 (371)
Q Consensus 227 ~G~l~~sra~Gd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d------ 300 (371)
..+|-.. ...+.+....+.+| |.+++.|||+.+
T Consensus 276 -------~piG~~~---------------------------------~~~~~~~~~~l~~g-d~lvl~tDGv~Ea~~~~~ 314 (367)
T COG2208 276 -------LPIGLLP---------------------------------DYQYEVASLQLEPG-DLLVLYTDGVTEARNSDG 314 (367)
T ss_pred -------ceeeecC---------------------------------CccchheeEEecCC-CEEEEEcCCeeeeecCCc
Confidence 1222211 13456678888998 999999999998
Q ss_pred -cCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhc----CCCCCcEEEEEEcC
Q 017430 301 -YMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQ----HSQDNISIVIADLG 349 (371)
Q Consensus 301 -~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~----g~~DNiTvIvv~l~ 349 (371)
.+..+...+++.+ ....+++++++.+.+..... .-.||+|+|++++.
T Consensus 315 ~~~~~~~~~~~~~~--~~~~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 315 EFFGLERLLKILGR--LLGQPAEEILEAILESLEELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred cEecHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHhhCCccccCceEEEEEEec
Confidence 6667777777765 34568899999888888764 34488999999875
No 20
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=56.23 E-value=5.1 Score=31.30 Aligned_cols=52 Identities=23% Similarity=0.305 Sum_probs=36.8
Q ss_pred ecCCCeEEEEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcEE
Q 017430 284 LGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISI 343 (371)
Q Consensus 284 l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g~~DNiTv 343 (371)
+.++ |-|+|+.||++-.+...+..+-++. . | ..+-+|-+...+||..+.++-
T Consensus 22 l~~~-D~vlL~qdGV~aAl~~~~~~~sl~~----~--p-~~~~alkeDl~ARGl~~~~s~ 73 (96)
T COG2168 22 LTEG-DAVLLLQDGVYAALKGNRYLASLRE----S--P-IKVYALKEDLLARGLTGQISR 73 (96)
T ss_pred hccc-CeEEEEcccchhhhcCcHHHHHHhc----C--c-cceeeehhhHHhccchhhcCc
Confidence 4667 8999999999999988887777642 2 1 334456666777776665554
No 21
>PRK10693 response regulator of RpoS; Provisional
Probab=50.89 E-value=2.2e+02 Score=26.88 Aligned_cols=105 Identities=11% Similarity=0.018 Sum_probs=53.2
Q ss_pred CCceEEEeecCCCCeeEEEEec--CCCChh-HHHHHHHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHHhHHHHHH
Q 017430 73 MEDGAVIQSDGLDGFSFAAVFD--GHGGVS-TVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNR 149 (371)
Q Consensus 73 nED~~~v~~~~~~~~~~~~V~D--G~GG~~-~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~L~~a~~~~~~~l~~~ 149 (371)
.-|.+-+..-. ++...|.++| ||||+. .+.++...+...+.+..... ....... ..+.+..+|+.+...
T Consensus 150 ~GD~~d~~~l~-~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~---~~~~~~~----p~~~l~~lN~~l~~~ 221 (303)
T PRK10693 150 PGLVLDIAALS-DNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAH---QNQRLPE----LGALLKQVNHLLRQA 221 (303)
T ss_pred CccEEeeeecC-CCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcc---cccccCC----HHHHHHHHHHHHHhc
Confidence 56776654432 3444555655 776565 33333344333333322100 0000011 233455566665542
Q ss_pred HHhccCcCCCCceeEEEEEe--cCEEEEEEeccceEEEeeCCce
Q 017430 150 LEMNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKA 191 (371)
Q Consensus 150 ~~~~~~~~~~GsTa~vv~i~--~~~l~vanvGDSra~l~r~g~~ 191 (371)
....-.|++.++++ .+.+.++|.|-...++..++++
T Consensus 222 ------~~~~~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 222 ------NLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred ------CCCceeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 11112577777775 4589999999999886444444
No 22
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=48.66 E-value=43 Score=29.52 Aligned_cols=49 Identities=20% Similarity=0.312 Sum_probs=35.0
Q ss_pred CeEEEEEcCccc-----------ccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcC
Q 017430 288 AEFVLLASDGLW-----------DYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQH 336 (371)
Q Consensus 288 ~d~liL~SDGl~-----------d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~A~~~g 336 (371)
||.++..|.|+| |+|.++..-+.+..-..+..=|++.|.+|++.-.++|
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 488999999998 5666666666664222222358899999999888776
No 23
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=41.79 E-value=17 Score=26.96 Aligned_cols=18 Identities=22% Similarity=0.355 Sum_probs=14.5
Q ss_pred CCCeEEEEEcCcccccCCh
Q 017430 286 SDAEFVLLASDGLWDYMNS 304 (371)
Q Consensus 286 ~~~d~liL~SDGl~d~l~~ 304 (371)
+| +.+|+++||+|=-+..
T Consensus 26 ~G-~Rllva~nGv~lEv~r 43 (72)
T PF09436_consen 26 PG-HRLLVASNGVFLEVRR 43 (72)
T ss_pred CC-cEEEEecCcEEEEEec
Confidence 56 9999999999965443
No 24
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=30.33 E-value=3e+02 Score=22.38 Aligned_cols=57 Identities=16% Similarity=0.198 Sum_probs=37.0
Q ss_pred CCcEEeecEEEEEEecCCCeEEEEEcCcccc-------cCChHHHHHHHHHHHHccCCHHHHHHHHH
Q 017430 270 KDLVIASPDIFQVSLGSDAEFVLLASDGLWD-------YMNSSDAVKFVRNQLQQHGDVQLACEALA 329 (371)
Q Consensus 270 ~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d-------~l~~~ei~~~v~~~l~~~~~~~~~a~~L~ 329 (371)
..+|+..|+++..+....+-|+|++..-.-+ -+++++|.- |.+ +.+-+.+++-++|.
T Consensus 36 ~~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~l-v~~--q~gvs~~~A~~AL~ 99 (115)
T PRK06369 36 KEIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIEL-VAE--QTGVSEEEARKALE 99 (115)
T ss_pred EEEEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHH-HHH--HHCcCHHHHHHHHH
Confidence 5778899999998887775688888877754 345555544 433 23445555544443
No 25
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=25.67 E-value=3e+02 Score=25.35 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=23.4
Q ss_pred cCEEEEEEeccceEEE--eeCCceeecCCCCCC
Q 017430 170 RDILFISHVGDCCVVL--SRTGKADVLTNPHRP 200 (371)
Q Consensus 170 ~~~l~vanvGDSra~l--~r~g~~~~lT~dH~~ 200 (371)
.++|.+.---||.+.| +|.|.++|.-.+|+.
T Consensus 242 sgrll~sg~~dssc~lydirg~r~iq~f~phsa 274 (350)
T KOG0641|consen 242 SGRLLASGHADSSCMLYDIRGGRMIQRFHPHSA 274 (350)
T ss_pred CcceeeeccCCCceEEEEeeCCceeeeeCCCcc
Confidence 4566666667777755 589999999888875
No 26
>PF05402 PqqD: Coenzyme PQQ synthesis protein D (PqqD); InterPro: IPR008792 This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; PDB: 3G2B_A.
Probab=22.59 E-value=2e+02 Score=20.14 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=15.6
Q ss_pred eEEEEEcCcccccCChHHHHHHHHHHHHccCCHHHHHHHHHHH
Q 017430 289 EFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQA 331 (371)
Q Consensus 289 d~liL~SDGl~d~l~~~ei~~~v~~~l~~~~~~~~~a~~L~~~ 331 (371)
++++|-.++-. ..-++...++.+.+....+..++++.|.+.
T Consensus 2 e~vll~~~~~~--~~Ln~~a~~Iw~~~~g~~t~~ei~~~l~~~ 42 (68)
T PF05402_consen 2 EYVLLDPESGE--FTLNETAAFIWELLDGPRTVEEIVDALAEE 42 (68)
T ss_dssp EEEEE------------THHHHHHHH--SSS-HHHHHHHHHHH
T ss_pred CEEEEeCCCCC--ccccHHHHHHHHHccCCCCHHHHHHHHHHH
Confidence 44555554443 244455555555555555666666665554
No 27
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=21.71 E-value=1.4e+02 Score=21.18 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=22.4
Q ss_pred CChHHHHHHHHHHHHccCCHHHHHHHHHH
Q 017430 302 MNSSDAVKFVRNQLQQHGDVQLACEALAQ 330 (371)
Q Consensus 302 l~~~ei~~~v~~~l~~~~~~~~~a~~L~~ 330 (371)
-+++||..++.+ .+.||.+++++|+.
T Consensus 19 hse~eIya~L~e---cnMDpnea~qrLL~ 44 (60)
T PF06972_consen 19 HSEEEIYAMLKE---CNMDPNEAVQRLLS 44 (60)
T ss_pred CCHHHHHHHHHH---hCCCHHHHHHHHHh
Confidence 588999999985 57899999999986
No 28
>TIGR00264 alpha-NAC-related protein. This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.
Probab=21.53 E-value=4.5e+02 Score=21.41 Aligned_cols=60 Identities=10% Similarity=0.073 Sum_probs=38.3
Q ss_pred ccCCCcEEeecEEEEEEecCCCeEEEEEcCcccc-----cCChHHHHHHHHHHHHccCCHHHHHHHHH
Q 017430 267 QLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWD-----YMNSSDAVKFVRNQLQQHGDVQLACEALA 329 (371)
Q Consensus 267 ~~~~~~v~~~p~i~~~~l~~~~d~liL~SDGl~d-----~l~~~ei~~~v~~~l~~~~~~~~~a~~L~ 329 (371)
..++.+|...|.+..++.....-|-|+++.-.-+ -+++++|.-+. + +.+-+.+++-++|.
T Consensus 37 ~~~k~ivf~~p~V~~m~~~G~~tYqI~G~~~~~~~~~~~~i~~eDI~lV~-e--q~gvs~e~A~~AL~ 101 (116)
T TIGR00264 37 FDDEEWIFENPKVQVMDILGVKTYQITGKPKKEKVEEEEEITEDDIELVM-K--QCNVSKEEARRALE 101 (116)
T ss_pred eCCceEEEecCeeEEEecCCcEEEEEecccEEeecccccCCCHHHHHHHH-H--HhCcCHHHHHHHHH
Confidence 3457888999999999988775666777776543 25666655444 3 23445555554443
Done!