Query 017431
Match_columns 371
No_of_seqs 127 out of 1464
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 08:30:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017431.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017431hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0022 Alcohol dehydrogenase, 100.0 9.9E-69 2.1E-73 463.8 33.0 369 1-369 7-375 (375)
2 COG1062 AdhC Zn-dependent alco 100.0 5.4E-68 1.2E-72 466.9 32.9 365 1-369 2-366 (366)
3 COG1064 AdhP Zn-dependent alco 100.0 1.6E-64 3.4E-69 455.1 33.0 333 1-370 3-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 8.5E-59 1.8E-63 405.1 31.0 341 1-371 4-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 5.9E-56 1.3E-60 386.3 29.9 341 1-370 9-355 (360)
6 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.8E-55 6E-60 415.1 36.4 368 1-369 1-368 (368)
7 cd08300 alcohol_DH_class_III c 100.0 1.1E-54 2.4E-59 411.3 36.6 367 1-368 2-368 (368)
8 PLN02740 Alcohol dehydrogenase 100.0 1.9E-54 4.2E-59 411.2 36.4 369 1-369 10-381 (381)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 1.8E-54 3.8E-59 410.4 35.8 360 2-366 1-370 (371)
10 cd08301 alcohol_DH_plants Plan 100.0 4.5E-54 9.7E-59 407.5 36.3 367 1-367 2-368 (369)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 3.6E-53 7.8E-58 399.6 34.5 356 1-369 1-358 (358)
12 PLN02827 Alcohol dehydrogenase 100.0 2.8E-52 6.1E-57 395.5 35.7 364 1-370 12-377 (378)
13 cd08277 liver_alcohol_DH_like 100.0 3.6E-52 7.7E-57 393.8 35.9 364 1-368 2-365 (365)
14 cd08239 THR_DH_like L-threonin 100.0 1.7E-51 3.7E-56 385.7 34.2 337 2-369 1-339 (339)
15 PRK09880 L-idonate 5-dehydroge 100.0 5.2E-50 1.1E-54 375.9 33.4 335 1-369 4-343 (343)
16 COG1063 Tdh Threonine dehydrog 100.0 1.7E-49 3.7E-54 371.0 33.3 342 2-369 1-350 (350)
17 COG0604 Qor NADPH:quinone redu 100.0 9.8E-50 2.1E-54 367.9 30.6 315 2-369 1-326 (326)
18 TIGR02819 fdhA_non_GSH formald 100.0 2.5E-49 5.3E-54 376.1 32.6 345 2-370 3-391 (393)
19 cd08299 alcohol_DH_class_I_II_ 100.0 5.9E-48 1.3E-52 365.6 36.3 366 1-369 7-373 (373)
20 PRK10309 galactitol-1-phosphat 100.0 6.6E-48 1.4E-52 362.5 34.1 338 2-369 1-346 (347)
21 PLN02586 probable cinnamyl alc 100.0 9.7E-48 2.1E-52 362.3 33.0 333 2-369 13-353 (360)
22 cd05279 Zn_ADH1 Liver alcohol 100.0 3.1E-47 6.6E-52 360.1 35.7 364 2-368 1-365 (365)
23 cd08230 glucose_DH Glucose deh 100.0 2.9E-47 6.3E-52 359.1 31.5 334 2-369 1-355 (355)
24 PLN02178 cinnamyl-alcohol dehy 100.0 5.7E-47 1.2E-51 358.2 33.0 330 5-369 10-348 (375)
25 TIGR03201 dearomat_had 6-hydro 100.0 8.5E-47 1.8E-51 355.0 33.1 333 5-369 2-349 (349)
26 cd08231 MDR_TM0436_like Hypoth 100.0 2.8E-46 6.1E-51 353.3 34.5 349 2-369 1-361 (361)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.3E-46 7.1E-51 347.8 31.4 321 5-368 2-329 (329)
28 cd08233 butanediol_DH_like (2R 100.0 1.2E-45 2.7E-50 347.6 33.8 335 2-368 1-351 (351)
29 PLN02514 cinnamyl-alcohol dehy 100.0 8.2E-46 1.8E-50 349.1 32.4 339 2-371 10-352 (357)
30 KOG1197 Predicted quinone oxid 100.0 1.5E-46 3.2E-51 316.4 23.8 312 2-370 9-331 (336)
31 cd08278 benzyl_alcohol_DH Benz 100.0 8.2E-45 1.8E-49 343.5 34.2 361 1-368 2-365 (365)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 1.7E-44 3.7E-49 339.9 35.2 342 2-369 1-351 (351)
33 cd08279 Zn_ADH_class_III Class 100.0 7.1E-44 1.5E-48 337.0 34.6 360 2-367 1-362 (363)
34 PRK10083 putative oxidoreducta 100.0 2.4E-43 5.2E-48 330.5 34.2 334 2-371 1-339 (339)
35 cd08237 ribitol-5-phosphate_DH 100.0 3.6E-44 7.8E-49 335.8 27.8 319 3-370 4-340 (341)
36 cd05278 FDH_like Formaldehyde 100.0 4.3E-43 9.3E-48 329.8 35.2 340 2-368 1-346 (347)
37 cd08238 sorbose_phosphate_red 100.0 1.6E-43 3.5E-48 339.3 32.6 331 1-370 2-369 (410)
38 cd08296 CAD_like Cinnamyl alco 100.0 3.6E-43 7.8E-48 328.5 33.4 330 2-368 1-333 (333)
39 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.1E-42 2.4E-47 327.4 33.6 336 2-367 1-350 (350)
40 cd08286 FDH_like_ADH2 formalde 100.0 1.4E-42 2.9E-47 326.2 34.0 337 2-369 1-345 (345)
41 cd08283 FDH_like_1 Glutathione 100.0 2E-42 4.4E-47 329.4 35.2 354 2-369 1-386 (386)
42 TIGR01202 bchC 2-desacetyl-2-h 100.0 3.7E-43 8E-48 324.5 28.8 302 1-368 1-308 (308)
43 cd05284 arabinose_DH_like D-ar 100.0 2.9E-42 6.4E-47 323.3 33.4 332 2-369 1-340 (340)
44 cd08263 Zn_ADH10 Alcohol dehyd 100.0 9.7E-42 2.1E-46 323.0 35.1 360 2-368 1-367 (367)
45 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.1E-41 2.3E-46 320.7 33.4 336 2-368 1-349 (350)
46 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.3E-41 4.9E-46 317.9 34.2 339 2-368 1-344 (345)
47 cd08284 FDH_like_2 Glutathione 100.0 3.3E-41 7.1E-46 316.7 33.8 338 2-368 1-343 (344)
48 cd08291 ETR_like_1 2-enoyl thi 100.0 1.8E-41 4E-46 315.8 29.5 309 2-368 1-324 (324)
49 cd08246 crotonyl_coA_red croto 100.0 9.5E-41 2.1E-45 319.0 32.9 337 1-367 12-391 (393)
50 cd08282 PFDH_like Pseudomonas 100.0 1.6E-40 3.6E-45 315.3 32.9 343 2-369 1-375 (375)
51 PRK05396 tdh L-threonine 3-deh 100.0 3E-40 6.6E-45 309.8 34.2 337 2-370 1-341 (341)
52 cd08287 FDH_like_ADH3 formalde 100.0 2.4E-40 5.2E-45 310.9 33.5 334 2-368 1-344 (345)
53 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.2E-40 4.8E-45 310.7 32.9 324 2-368 1-341 (341)
54 PLN02702 L-idonate 5-dehydroge 100.0 3.4E-40 7.4E-45 312.1 33.8 336 2-368 18-363 (364)
55 cd08261 Zn_ADH7 Alcohol dehydr 100.0 4.5E-40 9.7E-45 308.1 34.3 333 2-369 1-337 (337)
56 cd08242 MDR_like Medium chain 100.0 3.7E-40 7.9E-45 306.4 33.0 316 2-368 1-318 (319)
57 cd08235 iditol_2_DH_like L-idi 100.0 5.8E-40 1.2E-44 308.1 33.6 335 2-368 1-343 (343)
58 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 6.7E-40 1.5E-44 306.8 33.0 333 2-369 1-338 (338)
59 TIGR01751 crot-CoA-red crotony 100.0 7.3E-40 1.6E-44 313.2 32.9 340 1-370 7-388 (398)
60 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.1E-39 2.3E-44 310.5 33.5 337 2-367 29-383 (384)
61 PRK13771 putative alcohol dehy 100.0 6.5E-40 1.4E-44 306.6 30.8 329 2-369 1-333 (334)
62 cd05285 sorbitol_DH Sorbitol d 100.0 1.9E-39 4.1E-44 304.6 32.7 331 4-367 1-341 (343)
63 PRK09422 ethanol-active dehydr 100.0 2.2E-39 4.8E-44 303.5 32.9 332 2-369 1-336 (338)
64 cd08292 ETR_like_2 2-enoyl thi 100.0 1.1E-39 2.3E-44 303.7 30.5 309 2-368 1-324 (324)
65 cd05283 CAD1 Cinnamyl alcohol 100.0 1.5E-39 3.3E-44 304.5 31.3 334 3-368 1-337 (337)
66 cd08236 sugar_DH NAD(P)-depend 100.0 3.9E-39 8.4E-44 302.5 33.5 336 2-367 1-343 (343)
67 cd05281 TDH Threonine dehydrog 100.0 4.6E-39 9.9E-44 301.8 33.7 336 2-368 1-340 (341)
68 cd08297 CAD3 Cinnamyl alcohol 100.0 9.3E-39 2E-43 299.7 33.9 334 2-369 1-341 (341)
69 cd08232 idonate-5-DH L-idonate 100.0 6.9E-39 1.5E-43 300.3 32.5 331 6-369 2-339 (339)
70 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1E-38 2.2E-43 298.1 32.9 329 2-368 1-332 (332)
71 TIGR03366 HpnZ_proposed putati 100.0 5.4E-40 1.2E-44 299.4 22.7 269 58-350 1-280 (280)
72 PLN03154 putative allyl alcoho 100.0 8.1E-39 1.7E-43 300.3 30.2 299 14-371 27-347 (348)
73 TIGR00692 tdh L-threonine 3-de 100.0 1.9E-38 4.1E-43 297.5 32.5 334 6-369 3-340 (340)
74 cd08234 threonine_DH_like L-th 100.0 3E-38 6.4E-43 295.4 32.6 330 2-367 1-333 (334)
75 cd08266 Zn_ADH_like1 Alcohol d 100.0 3.7E-38 8E-43 295.0 32.2 335 2-369 1-342 (342)
76 cd08293 PTGR2 Prostaglandin re 100.0 2.6E-38 5.6E-43 297.1 30.0 299 14-369 23-345 (345)
77 KOG0025 Zn2+-binding dehydroge 100.0 2.2E-38 4.9E-43 271.7 26.7 312 2-369 20-352 (354)
78 cd08274 MDR9 Medium chain dehy 100.0 3.4E-38 7.4E-43 296.9 30.7 323 2-369 1-350 (350)
79 cd08264 Zn_ADH_like2 Alcohol d 100.0 3.1E-38 6.7E-43 294.2 30.0 320 2-365 1-324 (325)
80 cd08295 double_bond_reductase_ 100.0 1.9E-38 4.1E-43 297.2 28.4 309 3-369 9-338 (338)
81 cd08294 leukotriene_B4_DH_like 100.0 4.1E-38 8.9E-43 293.7 29.8 304 1-369 2-329 (329)
82 cd08298 CAD2 Cinnamyl alcohol 100.0 2.1E-37 4.6E-42 289.0 31.8 323 2-367 1-329 (329)
83 TIGR02825 B4_12hDH leukotriene 100.0 6.8E-38 1.5E-42 291.9 28.2 291 14-368 19-325 (325)
84 PRK10754 quinone oxidoreductas 100.0 1.5E-37 3.3E-42 289.7 29.5 314 1-368 1-326 (327)
85 cd08245 CAD Cinnamyl alcohol d 100.0 2.4E-37 5.2E-42 288.8 30.8 327 3-367 1-330 (330)
86 cd08290 ETR 2-enoyl thioester 100.0 3.5E-37 7.7E-42 289.0 28.3 314 2-369 1-341 (341)
87 cd08258 Zn_ADH4 Alcohol dehydr 100.0 9E-37 2E-41 281.8 30.3 300 2-333 1-306 (306)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 7.7E-37 1.7E-41 286.0 28.8 308 3-368 1-334 (336)
89 cd08244 MDR_enoyl_red Possible 100.0 2.7E-36 5.9E-41 280.7 31.5 312 2-369 1-324 (324)
90 cd08276 MDR7 Medium chain dehy 100.0 7.2E-36 1.6E-40 279.1 33.0 330 2-369 1-336 (336)
91 PTZ00354 alcohol dehydrogenase 100.0 3.6E-36 7.8E-41 281.0 30.7 313 1-370 1-329 (334)
92 cd08249 enoyl_reductase_like e 100.0 4E-36 8.8E-41 281.5 30.6 315 2-369 1-339 (339)
93 cd08250 Mgc45594_like Mgc45594 100.0 2.9E-36 6.4E-41 281.3 28.9 311 1-368 1-329 (329)
94 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 9.1E-36 2E-40 277.3 31.7 312 2-369 1-325 (325)
95 cd08270 MDR4 Medium chain dehy 100.0 2.1E-35 4.5E-40 272.5 29.1 297 2-369 1-305 (305)
96 cd08243 quinone_oxidoreductase 100.0 3.4E-35 7.4E-40 272.6 29.9 311 2-367 1-319 (320)
97 KOG1198 Zinc-binding oxidoredu 100.0 8.9E-36 1.9E-40 275.1 25.3 301 14-371 20-347 (347)
98 cd05282 ETR_like 2-enoyl thioe 100.0 3.4E-35 7.3E-40 273.3 29.0 298 14-368 14-323 (323)
99 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.2E-34 2.6E-39 268.3 30.5 301 9-367 3-311 (312)
100 TIGR02823 oxido_YhdH putative 100.0 1.8E-34 3.9E-39 268.6 30.8 311 3-369 1-323 (323)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 2.2E-34 4.7E-39 268.3 30.8 314 2-369 1-326 (326)
102 cd08252 AL_MDR Arginate lyase 100.0 2.6E-34 5.5E-39 269.0 29.9 312 2-368 1-336 (336)
103 cd08248 RTN4I1 Human Reticulon 100.0 1.6E-34 3.5E-39 271.9 25.9 311 2-368 1-350 (350)
104 COG2130 Putative NADP-dependen 100.0 3.8E-34 8.2E-39 248.2 25.0 298 14-371 27-340 (340)
105 cd05286 QOR2 Quinone oxidoredu 100.0 3.3E-33 7.2E-38 258.6 31.0 309 3-369 1-320 (320)
106 cd08288 MDR_yhdh Yhdh putative 100.0 4.1E-33 8.9E-38 259.5 31.6 312 2-369 1-324 (324)
107 cd05276 p53_inducible_oxidored 100.0 3.2E-33 6.8E-38 259.1 29.6 309 2-367 1-323 (323)
108 cd08253 zeta_crystallin Zeta-c 100.0 3.1E-33 6.7E-38 259.5 29.6 315 2-369 1-325 (325)
109 cd08271 MDR5 Medium chain dehy 100.0 5.6E-33 1.2E-37 258.3 30.5 312 2-369 1-325 (325)
110 cd08247 AST1_like AST1 is a cy 100.0 2.6E-33 5.6E-38 264.0 28.3 319 2-369 1-352 (352)
111 cd08272 MDR6 Medium chain dehy 100.0 4.5E-33 9.7E-38 258.8 29.1 311 2-369 1-326 (326)
112 cd08273 MDR8 Medium chain dehy 100.0 6.2E-33 1.3E-37 259.0 29.2 305 3-367 2-330 (331)
113 TIGR02824 quinone_pig3 putativ 100.0 3.5E-32 7.5E-37 252.6 29.9 311 2-369 1-325 (325)
114 cd08268 MDR2 Medium chain dehy 100.0 6.4E-32 1.4E-36 251.1 30.8 315 2-368 1-327 (328)
115 cd05288 PGDH Prostaglandin deh 100.0 2.6E-32 5.7E-37 254.6 28.1 304 3-367 3-329 (329)
116 cd05188 MDR Medium chain reduc 100.0 1.4E-32 3E-37 248.9 25.4 268 28-329 1-270 (271)
117 cd08251 polyketide_synthase po 100.0 1.2E-31 2.7E-36 246.5 27.6 292 21-367 2-303 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 7.9E-32 1.7E-36 248.4 26.3 301 2-367 1-309 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 5.7E-31 1.2E-35 244.1 29.0 309 2-368 1-323 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 1.6E-30 3.4E-35 243.1 31.0 310 3-369 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 7.1E-31 1.5E-35 243.5 26.4 295 15-367 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 5.6E-30 1.2E-34 233.7 24.6 282 27-367 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 2.1E-29 4.5E-34 229.7 24.0 276 31-366 2-287 (288)
124 KOG1202 Animal-type fatty acid 100.0 7.1E-29 1.5E-33 244.2 17.0 293 14-370 1429-1742(2376)
125 cd08255 2-desacetyl-2-hydroxye 100.0 1.1E-27 2.3E-32 218.2 23.5 250 48-367 14-277 (277)
126 KOG1196 Predicted NAD-dependen 99.9 1.2E-24 2.5E-29 188.6 26.1 295 15-370 25-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 1.9E-22 4.1E-27 156.9 7.8 108 26-155 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 8.7E-17 1.9E-21 129.2 12.2 128 197-332 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.4 2.1E-12 4.5E-17 121.8 14.8 175 175-370 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 4E-11 8.8E-16 115.9 15.4 154 183-342 161-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 1.2E-11 2.5E-16 98.8 2.7 122 230-367 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.5 6.4E-07 1.4E-11 81.3 10.5 167 181-361 72-252 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 7.7E-07 1.7E-11 86.2 11.5 127 184-313 161-312 (511)
134 PRK05476 S-adenosyl-L-homocyst 98.3 1.1E-05 2.3E-10 76.8 12.7 103 174-291 198-302 (425)
135 PRK08306 dipicolinate synthase 98.2 2.3E-05 5.1E-10 71.7 12.8 95 186-292 151-245 (296)
136 TIGR00936 ahcY adenosylhomocys 98.2 2.4E-05 5.2E-10 74.1 12.6 102 175-291 182-285 (406)
137 TIGR01035 hemA glutamyl-tRNA r 98.1 1.5E-07 3.4E-12 90.2 -3.8 158 59-268 90-252 (417)
138 PLN02494 adenosylhomocysteinas 98.1 4.2E-05 9E-10 73.2 11.4 101 175-290 241-343 (477)
139 PRK00517 prmA ribosomal protei 98.1 2.9E-05 6.2E-10 69.5 9.8 129 140-290 78-215 (250)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.0 1.8E-05 4E-10 73.0 8.1 109 150-269 139-251 (311)
141 TIGR00518 alaDH alanine dehydr 97.9 0.0001 2.2E-09 69.6 10.5 98 186-291 166-270 (370)
142 PRK08324 short chain dehydroge 97.7 0.0002 4.4E-09 73.5 11.0 137 140-290 386-559 (681)
143 PTZ00075 Adenosylhomocysteinas 97.7 0.0003 6.6E-09 67.5 10.9 101 176-291 242-344 (476)
144 PF01488 Shikimate_DH: Shikima 97.7 0.00019 4.2E-09 57.6 7.5 75 185-268 10-87 (135)
145 TIGR02853 spore_dpaA dipicolin 97.7 0.00073 1.6E-08 61.5 12.0 94 186-291 150-243 (287)
146 COG2518 Pcm Protein-L-isoaspar 97.6 0.00021 4.6E-09 60.8 7.5 109 166-287 54-168 (209)
147 TIGR00406 prmA ribosomal prote 97.5 0.00049 1.1E-08 62.9 9.2 96 184-289 157-260 (288)
148 COG4221 Short-chain alcohol de 97.5 0.00051 1.1E-08 59.7 8.5 79 186-266 5-91 (246)
149 PRK12771 putative glutamate sy 97.5 9.8E-05 2.1E-09 74.1 4.9 80 183-268 133-234 (564)
150 PRK00045 hemA glutamyl-tRNA re 97.5 0.00021 4.6E-09 68.9 6.3 159 59-268 92-254 (423)
151 PRK05693 short chain dehydroge 97.2 0.0055 1.2E-07 55.4 12.1 77 188-266 2-82 (274)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.0062 1.3E-07 53.7 12.0 102 186-290 4-137 (238)
153 PRK06182 short chain dehydroge 97.2 0.0049 1.1E-07 55.7 11.5 79 186-266 2-84 (273)
154 PRK00377 cbiT cobalt-precorrin 97.1 0.0068 1.5E-07 52.1 10.5 101 180-286 34-143 (198)
155 KOG1209 1-Acyl dihydroxyaceton 97.0 0.0065 1.4E-07 51.6 9.8 80 186-266 6-91 (289)
156 TIGR00438 rrmJ cell division p 97.0 0.011 2.4E-07 50.3 11.4 101 181-288 27-146 (188)
157 KOG1205 Predicted dehydrogenas 97.0 0.0064 1.4E-07 54.7 10.1 111 186-298 11-159 (282)
158 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0044 9.5E-08 52.3 8.6 92 183-289 32-128 (178)
159 PRK13943 protein-L-isoaspartat 97.0 0.0083 1.8E-07 55.5 10.8 102 179-287 73-179 (322)
160 PRK05993 short chain dehydroge 96.9 0.0076 1.6E-07 54.7 10.3 79 186-266 3-86 (277)
161 COG2264 PrmA Ribosomal protein 96.9 0.0059 1.3E-07 55.3 9.3 129 150-291 130-266 (300)
162 PRK04148 hypothetical protein; 96.9 0.0042 9E-08 49.3 7.4 86 185-279 15-100 (134)
163 PRK12742 oxidoreductase; Provi 96.9 0.019 4.1E-07 50.5 12.6 101 186-291 5-134 (237)
164 PRK11705 cyclopropane fatty ac 96.9 0.0045 9.7E-08 58.9 9.0 106 173-288 154-267 (383)
165 PF00670 AdoHcyase_NAD: S-aden 96.8 0.01 2.2E-07 48.6 9.2 94 182-290 18-112 (162)
166 PRK07326 short chain dehydroge 96.8 0.016 3.4E-07 51.0 11.3 79 186-266 5-92 (237)
167 PF01262 AlaDh_PNT_C: Alanine 96.8 0.0033 7.2E-08 52.5 6.3 102 187-291 20-142 (168)
168 COG2242 CobL Precorrin-6B meth 96.8 0.02 4.4E-07 47.8 10.6 103 180-289 28-136 (187)
169 PRK14967 putative methyltransf 96.8 0.056 1.2E-06 47.3 14.0 97 181-287 31-158 (223)
170 cd01080 NAD_bind_m-THF_DH_Cycl 96.7 0.012 2.6E-07 49.0 8.9 96 165-290 22-118 (168)
171 PRK12828 short chain dehydroge 96.7 0.024 5.2E-07 49.7 11.6 79 186-266 6-92 (239)
172 PRK13940 glutamyl-tRNA reducta 96.7 0.0069 1.5E-07 58.0 8.5 76 185-269 179-255 (414)
173 PRK05872 short chain dehydroge 96.7 0.018 3.9E-07 52.8 11.0 79 186-266 8-95 (296)
174 PF11017 DUF2855: Protein of u 96.7 0.074 1.6E-06 48.6 14.5 138 140-290 90-233 (314)
175 COG0300 DltE Short-chain dehyd 96.7 0.014 3.1E-07 52.0 9.8 80 185-266 4-94 (265)
176 PF13241 NAD_binding_7: Putati 96.7 0.014 3.1E-07 44.3 8.4 92 186-294 6-97 (103)
177 PF13460 NAD_binding_10: NADH( 96.7 0.021 4.5E-07 48.1 10.3 92 190-290 1-99 (183)
178 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.025 5.4E-07 55.2 12.2 79 185-265 208-293 (450)
179 COG4122 Predicted O-methyltran 96.7 0.021 4.6E-07 49.4 10.2 105 181-289 54-167 (219)
180 PRK08017 oxidoreductase; Provi 96.6 0.014 3E-07 52.0 9.5 77 188-266 3-84 (256)
181 PRK07806 short chain dehydroge 96.6 0.028 6.1E-07 49.8 11.4 101 186-289 5-135 (248)
182 COG3967 DltE Short-chain dehyd 96.6 0.011 2.4E-07 50.0 8.0 79 186-266 4-88 (245)
183 PRK08628 short chain dehydroge 96.6 0.027 5.9E-07 50.3 11.3 79 186-266 6-93 (258)
184 TIGR02469 CbiT precorrin-6Y C5 96.6 0.0085 1.8E-07 46.8 7.1 100 180-287 13-121 (124)
185 TIGR01809 Shik-DH-AROM shikima 96.6 0.007 1.5E-07 55.1 7.3 76 186-266 124-200 (282)
186 PRK08265 short chain dehydroge 96.6 0.028 6.1E-07 50.4 11.1 79 186-266 5-90 (261)
187 PRK06139 short chain dehydroge 96.6 0.01 2.2E-07 55.4 8.4 79 186-266 6-94 (330)
188 PF02353 CMAS: Mycolic acid cy 96.5 0.014 3E-07 52.8 8.8 101 177-289 53-167 (273)
189 PRK07576 short chain dehydroge 96.5 0.04 8.7E-07 49.5 11.9 78 186-265 8-95 (264)
190 PRK07231 fabG 3-ketoacyl-(acyl 96.5 0.029 6.3E-07 49.7 10.9 79 186-266 4-91 (251)
191 PF01135 PCMT: Protein-L-isoas 96.5 0.0039 8.3E-08 54.0 4.9 101 178-287 64-171 (209)
192 COG1748 LYS9 Saccharopine dehy 96.5 0.031 6.7E-07 52.7 11.1 96 188-290 2-101 (389)
193 PRK13942 protein-L-isoaspartat 96.5 0.0071 1.5E-07 52.6 6.5 101 178-287 68-175 (212)
194 PRK08177 short chain dehydroge 96.5 0.019 4E-07 50.3 9.3 77 188-266 2-81 (225)
195 PRK07109 short chain dehydroge 96.5 0.034 7.3E-07 52.0 11.2 79 186-266 7-95 (334)
196 PRK06057 short chain dehydroge 96.5 0.018 3.8E-07 51.4 9.0 79 186-266 6-89 (255)
197 PRK07060 short chain dehydroge 96.5 0.025 5.4E-07 50.0 9.9 77 186-266 8-87 (245)
198 PRK12549 shikimate 5-dehydroge 96.4 0.025 5.3E-07 51.6 9.9 43 185-227 125-167 (284)
199 cd05311 NAD_bind_2_malic_enz N 96.4 0.034 7.4E-07 48.8 10.5 93 184-288 22-128 (226)
200 PF12847 Methyltransf_18: Meth 96.4 0.022 4.8E-07 43.7 8.3 91 186-286 1-109 (112)
201 PLN03209 translocon at the inn 96.4 0.069 1.5E-06 53.0 13.3 46 180-226 73-119 (576)
202 PRK00811 spermidine synthase; 96.4 0.021 4.6E-07 52.0 9.1 96 186-288 76-191 (283)
203 PRK14175 bifunctional 5,10-met 96.3 0.027 5.9E-07 50.9 9.4 95 166-290 137-232 (286)
204 PRK13944 protein-L-isoaspartat 96.3 0.024 5.1E-07 49.1 8.7 100 179-287 65-172 (205)
205 PRK12939 short chain dehydroge 96.3 0.058 1.3E-06 47.7 11.5 79 186-266 6-94 (250)
206 PRK03369 murD UDP-N-acetylmura 96.3 0.025 5.5E-07 55.8 9.9 73 184-267 9-81 (488)
207 TIGR01470 cysG_Nterm siroheme 96.3 0.17 3.6E-06 43.8 13.7 93 186-289 8-101 (205)
208 PRK06500 short chain dehydroge 96.3 0.066 1.4E-06 47.4 11.7 79 186-266 5-90 (249)
209 COG0169 AroE Shikimate 5-dehyd 96.3 0.012 2.6E-07 53.2 6.8 74 185-266 124-200 (283)
210 PF06325 PrmA: Ribosomal prote 96.3 0.016 3.5E-07 52.8 7.5 96 184-291 159-262 (295)
211 COG0373 HemA Glutamyl-tRNA red 96.2 0.023 5.1E-07 53.8 8.6 95 185-289 176-275 (414)
212 TIGR02356 adenyl_thiF thiazole 96.2 0.043 9.2E-07 47.3 9.5 35 186-220 20-54 (202)
213 PRK08267 short chain dehydroge 96.2 0.083 1.8E-06 47.2 11.9 77 188-266 2-87 (260)
214 PRK06841 short chain dehydroge 96.2 0.025 5.5E-07 50.3 8.5 79 186-266 14-99 (255)
215 PRK06718 precorrin-2 dehydroge 96.2 0.16 3.4E-06 43.8 12.9 91 186-289 9-101 (202)
216 PRK06128 oxidoreductase; Provi 96.2 0.061 1.3E-06 49.4 11.1 102 186-290 54-193 (300)
217 PRK08261 fabG 3-ketoacyl-(acyl 96.2 0.013 2.8E-07 57.2 7.0 94 180-291 27-126 (450)
218 PRK06953 short chain dehydroge 96.2 0.041 8.8E-07 48.0 9.5 77 188-266 2-80 (222)
219 COG0686 Ald Alanine dehydrogen 96.2 0.019 4.2E-07 51.6 7.2 97 187-291 168-271 (371)
220 PRK06949 short chain dehydroge 96.2 0.027 5.9E-07 50.2 8.5 80 185-266 7-96 (258)
221 PRK12550 shikimate 5-dehydroge 96.2 0.032 7E-07 50.3 8.9 70 183-266 118-188 (272)
222 PRK07831 short chain dehydroge 96.1 0.034 7.3E-07 49.8 9.0 82 183-266 13-107 (262)
223 PRK00536 speE spermidine synth 96.1 0.023 5E-07 50.8 7.7 98 186-289 72-172 (262)
224 PRK12829 short chain dehydroge 96.1 0.023 5E-07 50.8 7.8 82 183-266 7-96 (264)
225 PLN02366 spermidine synthase 96.1 0.042 9.2E-07 50.5 9.5 102 185-288 90-206 (308)
226 PRK07814 short chain dehydroge 96.1 0.028 6.2E-07 50.4 8.3 79 186-266 9-97 (263)
227 TIGR03325 BphB_TodD cis-2,3-di 96.1 0.03 6.4E-07 50.2 8.4 78 186-265 4-88 (262)
228 PRK05653 fabG 3-ketoacyl-(acyl 96.1 0.1 2.2E-06 45.9 11.6 79 186-266 4-92 (246)
229 PRK07825 short chain dehydroge 96.1 0.036 7.8E-07 50.0 8.9 78 187-266 5-88 (273)
230 PRK06200 2,3-dihydroxy-2,3-dih 96.1 0.034 7.3E-07 49.9 8.6 78 186-265 5-89 (263)
231 PRK06484 short chain dehydroge 96.0 0.078 1.7E-06 52.7 12.0 103 185-290 267-402 (520)
232 TIGR00080 pimt protein-L-isoas 96.0 0.016 3.5E-07 50.5 6.2 101 178-287 69-176 (215)
233 PRK14027 quinate/shikimate deh 96.0 0.059 1.3E-06 49.0 10.0 43 185-227 125-167 (283)
234 PRK06398 aldose dehydrogenase; 96.0 0.068 1.5E-06 47.8 10.4 74 186-266 5-82 (258)
235 PRK07832 short chain dehydroge 96.0 0.1 2.2E-06 47.1 11.6 76 189-266 2-88 (272)
236 PRK00107 gidB 16S rRNA methylt 96.0 0.025 5.3E-07 48.1 7.0 97 184-288 43-145 (187)
237 TIGR01832 kduD 2-deoxy-D-gluco 96.0 0.044 9.5E-07 48.6 8.8 79 186-266 4-90 (248)
238 PRK09186 flagellin modificatio 95.9 0.12 2.6E-06 45.9 11.7 78 186-265 3-92 (256)
239 PRK09291 short chain dehydroge 95.9 0.044 9.4E-07 48.8 8.8 73 187-265 2-82 (257)
240 PRK06101 short chain dehydroge 95.9 0.19 4E-06 44.4 12.7 75 188-265 2-80 (240)
241 PLN02780 ketoreductase/ oxidor 95.9 0.038 8.3E-07 51.3 8.6 79 186-265 52-141 (320)
242 PRK06719 precorrin-2 dehydroge 95.9 0.22 4.7E-06 41.0 12.1 88 186-287 12-99 (157)
243 PRK08339 short chain dehydroge 95.9 0.05 1.1E-06 48.9 9.1 104 186-291 7-146 (263)
244 PRK07502 cyclohexadienyl dehyd 95.9 0.089 1.9E-06 48.5 10.8 91 188-289 7-101 (307)
245 COG2519 GCD14 tRNA(1-methylade 95.9 0.066 1.4E-06 47.0 9.1 103 179-289 87-196 (256)
246 PRK06180 short chain dehydroge 95.9 0.044 9.6E-07 49.6 8.7 79 186-266 3-88 (277)
247 PRK08618 ornithine cyclodeamin 95.9 0.082 1.8E-06 49.2 10.5 94 185-291 125-224 (325)
248 PRK12548 shikimate 5-dehydroge 95.9 0.063 1.4E-06 49.0 9.6 37 185-221 124-160 (289)
249 PRK07774 short chain dehydroge 95.9 0.046 9.9E-07 48.5 8.5 79 186-266 5-93 (250)
250 PRK00258 aroE shikimate 5-dehy 95.9 0.028 6E-07 51.1 7.1 94 185-287 121-220 (278)
251 PRK09242 tropinone reductase; 95.8 0.15 3.2E-06 45.4 11.9 79 186-266 8-98 (257)
252 PRK05867 short chain dehydroge 95.8 0.041 8.9E-07 49.0 8.2 79 186-266 8-96 (253)
253 PRK12429 3-hydroxybutyrate deh 95.8 0.081 1.7E-06 47.0 9.9 79 186-266 3-91 (258)
254 CHL00194 ycf39 Ycf39; Provisio 95.8 0.14 3E-06 47.5 11.6 95 189-290 2-111 (317)
255 PRK08217 fabG 3-ketoacyl-(acyl 95.7 0.058 1.3E-06 47.8 8.6 78 186-265 4-91 (253)
256 PRK06701 short chain dehydroge 95.7 0.15 3.3E-06 46.5 11.5 104 184-290 43-183 (290)
257 PRK06484 short chain dehydroge 95.7 0.12 2.7E-06 51.3 11.7 79 186-266 4-89 (520)
258 PRK05866 short chain dehydroge 95.7 0.071 1.5E-06 48.8 9.1 79 186-266 39-127 (293)
259 TIGR01318 gltD_gamma_fam gluta 95.7 0.061 1.3E-06 52.8 9.1 78 185-267 139-237 (467)
260 PRK08263 short chain dehydroge 95.6 0.13 2.7E-06 46.5 10.6 78 187-266 3-87 (275)
261 PRK14192 bifunctional 5,10-met 95.6 0.074 1.6E-06 48.3 8.9 77 184-290 156-233 (283)
262 PRK06196 oxidoreductase; Provi 95.6 0.074 1.6E-06 49.2 9.2 79 186-266 25-109 (315)
263 PRK07904 short chain dehydroge 95.6 0.098 2.1E-06 46.7 9.7 81 184-266 5-97 (253)
264 PRK06198 short chain dehydroge 95.6 0.059 1.3E-06 48.1 8.3 80 186-266 5-94 (260)
265 PRK12749 quinate/shikimate deh 95.6 0.083 1.8E-06 48.2 9.2 37 185-221 122-158 (288)
266 PRK09072 short chain dehydroge 95.6 0.08 1.7E-06 47.4 9.1 79 186-266 4-90 (263)
267 PRK07985 oxidoreductase; Provi 95.6 0.15 3.2E-06 46.7 11.0 102 186-290 48-187 (294)
268 PRK12809 putative oxidoreducta 95.5 0.074 1.6E-06 54.4 9.6 75 186-266 309-405 (639)
269 PRK07402 precorrin-6B methylas 95.5 0.26 5.5E-06 42.2 11.7 104 178-289 32-143 (196)
270 PRK06463 fabG 3-ketoacyl-(acyl 95.5 0.073 1.6E-06 47.4 8.6 79 186-266 6-89 (255)
271 PRK12937 short chain dehydroge 95.5 0.22 4.9E-06 43.8 11.7 102 186-290 4-141 (245)
272 PRK06483 dihydromonapterin red 95.5 0.098 2.1E-06 46.0 9.3 78 187-266 2-84 (236)
273 PRK07533 enoyl-(acyl carrier p 95.5 0.094 2E-06 46.9 9.3 102 186-290 9-150 (258)
274 PRK07523 gluconate 5-dehydroge 95.5 0.059 1.3E-06 48.0 8.0 79 186-266 9-97 (255)
275 PRK07062 short chain dehydroge 95.5 0.061 1.3E-06 48.2 8.1 79 186-266 7-97 (265)
276 COG2227 UbiG 2-polyprenyl-3-me 95.5 0.11 2.4E-06 45.3 9.1 95 185-287 58-160 (243)
277 cd01075 NAD_bind_Leu_Phe_Val_D 95.5 0.1 2.2E-06 44.9 9.0 83 184-279 25-108 (200)
278 PRK08589 short chain dehydroge 95.5 0.067 1.5E-06 48.3 8.3 79 186-266 5-92 (272)
279 PF03435 Saccharop_dh: Sacchar 95.5 0.09 2E-06 50.2 9.5 91 190-287 1-97 (386)
280 PRK07024 short chain dehydroge 95.5 0.083 1.8E-06 47.2 8.8 78 187-266 2-88 (257)
281 PRK13394 3-hydroxybutyrate deh 95.5 0.083 1.8E-06 47.1 8.8 79 186-266 6-94 (262)
282 PRK07478 short chain dehydroge 95.5 0.074 1.6E-06 47.3 8.5 79 186-266 5-93 (254)
283 PRK08703 short chain dehydroge 95.5 0.12 2.5E-06 45.6 9.6 80 186-266 5-97 (239)
284 cd00755 YgdL_like Family of ac 95.5 0.15 3.2E-06 44.9 9.9 35 187-221 11-45 (231)
285 PRK11207 tellurite resistance 95.5 0.058 1.2E-06 46.3 7.3 98 181-289 25-135 (197)
286 PRK15116 sulfur acceptor prote 95.5 0.35 7.6E-06 43.5 12.4 35 186-220 29-63 (268)
287 PRK06194 hypothetical protein; 95.5 0.072 1.6E-06 48.4 8.4 79 186-266 5-93 (287)
288 PRK07890 short chain dehydroge 95.4 0.083 1.8E-06 47.0 8.6 79 186-266 4-92 (258)
289 PRK08594 enoyl-(acyl carrier p 95.4 0.19 4.1E-06 44.9 10.9 103 186-291 6-150 (257)
290 PLN02476 O-methyltransferase 95.4 0.13 2.7E-06 46.5 9.5 105 179-287 111-227 (278)
291 PRK06179 short chain dehydroge 95.4 0.045 9.7E-07 49.3 6.8 77 186-266 3-83 (270)
292 PRK05717 oxidoreductase; Valid 95.4 0.082 1.8E-06 47.1 8.5 79 186-266 9-94 (255)
293 PRK12475 thiamine/molybdopteri 95.4 0.11 2.4E-06 48.5 9.5 36 186-221 23-58 (338)
294 PLN02781 Probable caffeoyl-CoA 95.4 0.11 2.4E-06 45.9 9.0 104 180-287 62-177 (234)
295 PRK12481 2-deoxy-D-gluconate 3 95.4 0.076 1.7E-06 47.3 8.2 79 186-266 7-93 (251)
296 PRK06849 hypothetical protein; 95.4 0.53 1.2E-05 44.9 14.4 79 186-266 3-86 (389)
297 PRK04457 spermidine synthase; 95.4 0.2 4.3E-06 45.1 10.7 95 185-287 65-176 (262)
298 PRK06172 short chain dehydroge 95.4 0.082 1.8E-06 47.0 8.3 79 186-266 6-94 (253)
299 PRK12823 benD 1,6-dihydroxycyc 95.4 0.068 1.5E-06 47.7 7.8 78 186-265 7-93 (260)
300 PRK05876 short chain dehydroge 95.4 0.09 1.9E-06 47.6 8.6 79 186-266 5-93 (275)
301 PRK07454 short chain dehydroge 95.3 0.11 2.4E-06 45.8 9.0 79 186-266 5-93 (241)
302 PRK06505 enoyl-(acyl carrier p 95.3 0.096 2.1E-06 47.3 8.7 78 186-265 6-94 (271)
303 PRK08213 gluconate 5-dehydroge 95.3 0.095 2E-06 46.8 8.6 79 186-266 11-99 (259)
304 PRK07677 short chain dehydroge 95.3 0.091 2E-06 46.7 8.4 78 187-266 1-88 (252)
305 PRK12367 short chain dehydroge 95.3 0.13 2.8E-06 45.8 9.3 73 186-266 13-89 (245)
306 PRK08264 short chain dehydroge 95.3 0.076 1.6E-06 46.7 7.8 75 186-266 5-83 (238)
307 PRK06079 enoyl-(acyl carrier p 95.3 0.098 2.1E-06 46.6 8.6 102 186-290 6-145 (252)
308 PRK05884 short chain dehydroge 95.3 0.14 3E-06 44.8 9.3 74 189-265 2-78 (223)
309 PLN03075 nicotianamine synthas 95.3 0.12 2.6E-06 47.0 8.8 95 186-287 123-232 (296)
310 KOG1014 17 beta-hydroxysteroid 95.3 0.12 2.7E-06 46.6 8.8 79 185-266 47-136 (312)
311 PF00106 adh_short: short chai 95.3 0.049 1.1E-06 44.9 6.1 78 188-266 1-90 (167)
312 PRK07856 short chain dehydroge 95.3 0.077 1.7E-06 47.2 7.8 75 186-266 5-85 (252)
313 TIGR02355 moeB molybdopterin s 95.2 0.12 2.6E-06 45.8 8.8 35 187-221 24-58 (240)
314 PRK08219 short chain dehydroge 95.2 0.2 4.3E-06 43.5 10.2 72 188-266 4-81 (227)
315 PRK06138 short chain dehydroge 95.2 0.089 1.9E-06 46.6 8.1 79 186-266 4-91 (252)
316 PRK06125 short chain dehydroge 95.2 0.092 2E-06 46.9 8.2 77 186-266 6-91 (259)
317 PRK06482 short chain dehydroge 95.2 0.1 2.2E-06 47.1 8.6 77 188-266 3-86 (276)
318 PRK08862 short chain dehydroge 95.2 0.15 3.3E-06 44.7 9.4 78 186-265 4-92 (227)
319 PRK07063 short chain dehydroge 95.2 0.11 2.3E-06 46.5 8.6 79 186-266 6-96 (260)
320 PRK07035 short chain dehydroge 95.2 0.099 2.2E-06 46.4 8.3 78 186-265 7-94 (252)
321 PRK06181 short chain dehydroge 95.2 0.11 2.3E-06 46.5 8.6 78 187-266 1-88 (263)
322 PRK06940 short chain dehydroge 95.2 0.31 6.6E-06 44.1 11.6 100 187-290 2-127 (275)
323 PRK07688 thiamine/molybdopteri 95.2 0.13 2.8E-06 48.1 9.2 36 186-221 23-58 (339)
324 PRK08644 thiamine biosynthesis 95.2 0.13 2.9E-06 44.6 8.7 35 186-220 27-61 (212)
325 PRK05854 short chain dehydroge 95.2 0.12 2.6E-06 47.8 9.1 39 186-225 13-52 (313)
326 PRK08226 short chain dehydroge 95.2 0.11 2.3E-06 46.5 8.5 79 186-266 5-92 (263)
327 PF01596 Methyltransf_3: O-met 95.2 0.026 5.5E-07 48.7 4.1 101 184-288 43-155 (205)
328 TIGR02354 thiF_fam2 thiamine b 95.2 0.082 1.8E-06 45.4 7.3 35 186-220 20-54 (200)
329 PRK08317 hypothetical protein; 95.2 0.25 5.5E-06 43.3 10.7 102 179-288 12-124 (241)
330 PRK06114 short chain dehydroge 95.2 0.12 2.6E-06 46.0 8.7 79 186-266 7-96 (254)
331 PLN00203 glutamyl-tRNA reducta 95.1 0.084 1.8E-06 52.1 8.2 74 187-267 266-340 (519)
332 cd01078 NAD_bind_H4MPT_DH NADP 95.1 0.16 3.4E-06 43.5 9.0 77 185-268 26-109 (194)
333 COG2230 Cfa Cyclopropane fatty 95.1 0.12 2.5E-06 46.6 8.3 103 174-291 60-179 (283)
334 COG1179 Dinucleotide-utilizing 95.1 0.3 6.4E-06 42.6 10.4 102 186-289 29-154 (263)
335 PRK01581 speE spermidine synth 95.1 0.54 1.2E-05 44.0 12.9 102 185-289 149-269 (374)
336 PRK08643 acetoin reductase; Va 95.1 0.11 2.4E-06 46.3 8.3 78 187-266 2-89 (256)
337 PRK08993 2-deoxy-D-gluconate 3 95.1 0.12 2.6E-06 46.0 8.6 79 186-266 9-95 (253)
338 PF03446 NAD_binding_2: NAD bi 95.1 0.38 8.2E-06 39.8 11.0 88 188-289 2-95 (163)
339 TIGR00507 aroE shikimate 5-deh 95.1 0.13 2.9E-06 46.5 8.8 91 184-287 114-213 (270)
340 PRK12769 putative oxidoreducta 95.1 0.11 2.3E-06 53.3 9.1 76 185-266 325-422 (654)
341 PRK06935 2-deoxy-D-gluconate 3 95.1 0.11 2.5E-06 46.2 8.4 79 186-266 14-101 (258)
342 PRK14188 bifunctional 5,10-met 95.1 0.17 3.7E-06 46.1 9.4 94 166-290 137-232 (296)
343 PRK06914 short chain dehydroge 95.1 0.12 2.6E-06 46.7 8.6 78 186-266 2-91 (280)
344 PLN02253 xanthoxin dehydrogena 95.0 0.11 2.3E-06 47.0 8.2 79 186-266 17-104 (280)
345 PRK07574 formate dehydrogenase 95.0 0.23 4.9E-06 47.2 10.5 91 185-289 190-285 (385)
346 PRK06077 fabG 3-ketoacyl-(acyl 95.0 0.38 8.3E-06 42.5 11.6 102 187-291 6-143 (252)
347 COG3288 PntA NAD/NADP transhyd 95.0 0.13 2.7E-06 46.4 8.1 131 181-313 158-308 (356)
348 PRK07577 short chain dehydroge 95.0 0.11 2.3E-06 45.5 7.9 74 186-266 2-78 (234)
349 PRK07453 protochlorophyllide o 95.0 0.13 2.8E-06 47.7 8.7 78 186-265 5-92 (322)
350 PRK06197 short chain dehydroge 95.0 0.14 3E-06 47.1 8.9 79 186-266 15-105 (306)
351 PF02254 TrkA_N: TrkA-N domain 95.0 0.75 1.6E-05 35.3 11.8 92 190-287 1-95 (116)
352 PRK05690 molybdopterin biosynt 95.0 0.18 3.9E-06 44.8 9.2 36 186-221 31-66 (245)
353 cd01065 NAD_bind_Shikimate_DH 95.0 0.15 3.1E-06 41.7 8.1 74 185-267 17-92 (155)
354 KOG0725 Reductases with broad 95.0 0.13 2.8E-06 46.5 8.4 81 185-266 6-99 (270)
355 COG2226 UbiE Methylase involve 95.0 0.28 6.1E-06 43.2 10.1 106 179-291 44-159 (238)
356 PRK12826 3-ketoacyl-(acyl-carr 95.0 0.12 2.7E-06 45.6 8.2 79 186-266 5-93 (251)
357 PRK06124 gluconate 5-dehydroge 94.9 0.15 3.2E-06 45.4 8.6 79 186-266 10-98 (256)
358 PRK05875 short chain dehydroge 94.9 0.14 3E-06 46.2 8.6 78 186-265 6-95 (276)
359 PRK07074 short chain dehydroge 94.9 0.15 3.3E-06 45.3 8.8 78 187-266 2-87 (257)
360 PRK08220 2,3-dihydroxybenzoate 94.9 0.27 5.8E-06 43.5 10.3 74 186-266 7-86 (252)
361 PRK14191 bifunctional 5,10-met 94.9 0.2 4.3E-06 45.3 9.2 94 166-290 136-231 (285)
362 PRK08277 D-mannonate oxidoredu 94.9 0.14 2.9E-06 46.4 8.5 78 186-265 9-96 (278)
363 PF03807 F420_oxidored: NADP o 94.9 0.87 1.9E-05 33.7 11.5 85 189-287 1-93 (96)
364 PLN02823 spermine synthase 94.9 0.24 5.3E-06 46.1 10.1 99 186-287 103-219 (336)
365 PRK06720 hypothetical protein; 94.9 0.18 3.9E-06 42.1 8.5 38 186-224 15-53 (169)
366 COG0421 SpeE Spermidine syntha 94.9 0.32 7E-06 44.1 10.5 97 188-287 78-189 (282)
367 PRK10538 malonic semialdehyde 94.9 0.15 3.3E-06 45.2 8.5 76 189-266 2-84 (248)
368 PRK07067 sorbitol dehydrogenas 94.9 0.15 3.3E-06 45.4 8.6 79 186-266 5-90 (257)
369 PRK08251 short chain dehydroge 94.9 0.16 3.5E-06 44.9 8.7 77 187-265 2-90 (248)
370 PLN02589 caffeoyl-CoA O-methyl 94.9 0.23 5.1E-06 44.1 9.5 102 181-286 74-188 (247)
371 PRK13243 glyoxylate reductase; 94.8 0.24 5.2E-06 46.3 9.9 38 185-223 148-185 (333)
372 PRK08085 gluconate 5-dehydroge 94.8 0.17 3.8E-06 44.9 8.8 79 186-266 8-96 (254)
373 COG0031 CysK Cysteine synthase 94.8 0.8 1.7E-05 41.6 12.7 59 179-239 54-116 (300)
374 TIGR03840 TMPT_Se_Te thiopurin 94.8 0.32 6.8E-06 42.3 10.0 100 185-289 33-153 (213)
375 PRK10792 bifunctional 5,10-met 94.8 0.23 5E-06 44.8 9.3 94 166-290 138-233 (285)
376 PF02558 ApbA: Ketopantoate re 94.8 0.02 4.4E-07 46.6 2.5 95 190-289 1-102 (151)
377 PRK14194 bifunctional 5,10-met 94.8 0.23 4.9E-06 45.3 9.3 95 166-290 138-233 (301)
378 PLN03139 formate dehydrogenase 94.8 0.28 6E-06 46.6 10.2 47 185-232 197-243 (386)
379 PRK06603 enoyl-(acyl carrier p 94.8 0.2 4.4E-06 44.8 9.1 78 186-265 7-95 (260)
380 cd01483 E1_enzyme_family Super 94.7 0.3 6.6E-06 39.3 9.3 32 189-220 1-32 (143)
381 PRK01683 trans-aconitate 2-met 94.7 0.39 8.4E-06 43.0 10.9 97 180-287 25-129 (258)
382 PRK12936 3-ketoacyl-(acyl-carr 94.7 0.18 3.8E-06 44.4 8.6 79 186-266 5-90 (245)
383 PRK08340 glucose-1-dehydrogena 94.7 0.17 3.8E-06 45.1 8.5 76 189-266 2-86 (259)
384 PRK08415 enoyl-(acyl carrier p 94.7 0.2 4.4E-06 45.3 9.0 102 186-290 4-145 (274)
385 PRK07666 fabG 3-ketoacyl-(acyl 94.7 0.17 3.6E-06 44.6 8.3 79 186-266 6-94 (239)
386 KOG1201 Hydroxysteroid 17-beta 94.7 0.2 4.4E-06 45.1 8.6 80 185-266 36-124 (300)
387 PRK12384 sorbitol-6-phosphate 94.7 0.16 3.4E-06 45.3 8.1 78 187-266 2-91 (259)
388 PLN02657 3,8-divinyl protochlo 94.7 0.31 6.6E-06 46.6 10.5 106 182-290 55-183 (390)
389 TIGR01963 PHB_DH 3-hydroxybuty 94.7 0.16 3.5E-06 45.0 8.2 78 187-266 1-88 (255)
390 PRK08303 short chain dehydroge 94.7 0.18 3.8E-06 46.5 8.6 34 186-220 7-41 (305)
391 TIGR02622 CDP_4_6_dhtase CDP-g 94.7 0.086 1.9E-06 49.5 6.7 75 186-266 3-85 (349)
392 PRK05562 precorrin-2 dehydroge 94.6 1.4 3.1E-05 38.4 13.5 93 186-289 24-117 (223)
393 PRK12746 short chain dehydroge 94.6 0.52 1.1E-05 41.8 11.3 38 186-224 5-44 (254)
394 PRK08328 hypothetical protein; 94.6 0.25 5.5E-06 43.5 9.0 36 186-221 26-61 (231)
395 PRK15469 ghrA bifunctional gly 94.6 0.28 6.1E-06 45.3 9.6 89 185-289 134-227 (312)
396 TIGR00417 speE spermidine synt 94.5 0.33 7.2E-06 43.9 9.9 100 186-288 72-186 (270)
397 TIGR03206 benzo_BadH 2-hydroxy 94.5 0.23 5E-06 43.9 8.8 78 186-265 2-89 (250)
398 cd01492 Aos1_SUMO Ubiquitin ac 94.5 0.28 6E-06 42.1 8.9 35 186-220 20-54 (197)
399 TIGR00477 tehB tellurite resis 94.5 0.17 3.7E-06 43.3 7.6 98 180-288 24-133 (195)
400 PRK07340 ornithine cyclodeamin 94.5 0.13 2.7E-06 47.4 7.2 95 185-292 123-221 (304)
401 PRK08762 molybdopterin biosynt 94.5 0.2 4.4E-06 47.6 8.8 35 186-220 134-168 (376)
402 PRK14103 trans-aconitate 2-met 94.5 0.5 1.1E-05 42.3 10.9 97 178-287 21-125 (255)
403 PRK08300 acetaldehyde dehydrog 94.5 0.45 9.7E-06 43.5 10.5 93 188-287 5-100 (302)
404 PRK12743 oxidoreductase; Provi 94.5 0.22 4.8E-06 44.4 8.6 78 187-266 2-90 (256)
405 PRK12747 short chain dehydroge 94.4 0.66 1.4E-05 41.1 11.6 104 186-291 3-147 (252)
406 TIGR02632 RhaD_aldol-ADH rhamn 94.4 0.21 4.6E-06 51.4 9.3 114 140-266 378-503 (676)
407 cd01487 E1_ThiF_like E1_ThiF_l 94.4 0.26 5.6E-06 41.3 8.3 33 189-221 1-33 (174)
408 PRK13656 trans-2-enoyl-CoA red 94.4 0.34 7.4E-06 45.7 9.8 79 185-267 39-142 (398)
409 PRK07791 short chain dehydroge 94.4 0.25 5.5E-06 44.9 8.9 36 185-221 4-40 (286)
410 PRK08159 enoyl-(acyl carrier p 94.4 0.29 6.2E-06 44.2 9.2 104 184-290 7-150 (272)
411 PRK08690 enoyl-(acyl carrier p 94.4 0.25 5.4E-06 44.3 8.7 79 186-266 5-94 (261)
412 TIGR03215 ac_ald_DH_ac acetald 94.4 0.43 9.2E-06 43.4 10.0 88 189-287 3-93 (285)
413 PRK00312 pcm protein-L-isoaspa 94.3 0.14 3.1E-06 44.4 6.9 98 179-287 71-174 (212)
414 PRK08278 short chain dehydroge 94.3 0.21 4.5E-06 45.1 8.2 36 186-222 5-41 (273)
415 PF08704 GCD14: tRNA methyltra 94.3 0.086 1.9E-06 46.8 5.4 106 178-289 32-147 (247)
416 PLN00141 Tic62-NAD(P)-related 94.3 0.26 5.7E-06 43.8 8.7 101 185-290 15-133 (251)
417 PRK07102 short chain dehydroge 94.3 0.35 7.6E-06 42.6 9.5 37 188-225 2-39 (243)
418 PRK07097 gluconate 5-dehydroge 94.3 0.26 5.6E-06 44.2 8.7 79 186-266 9-97 (265)
419 PF00899 ThiF: ThiF family; I 94.3 0.2 4.2E-06 40.1 7.0 35 187-221 2-36 (135)
420 PRK13255 thiopurine S-methyltr 94.3 0.49 1.1E-05 41.3 10.0 100 183-287 34-154 (218)
421 cd00757 ThiF_MoeB_HesA_family 94.2 0.4 8.7E-06 42.1 9.5 35 187-221 21-55 (228)
422 PRK06523 short chain dehydroge 94.2 0.18 4E-06 44.9 7.6 75 186-265 8-86 (260)
423 PRK07417 arogenate dehydrogena 94.2 0.43 9.4E-06 43.3 10.0 88 189-289 2-92 (279)
424 PRK05650 short chain dehydroge 94.2 0.26 5.5E-06 44.3 8.5 76 189-266 2-87 (270)
425 PLN02928 oxidoreductase family 94.2 0.44 9.4E-06 44.8 10.1 97 185-289 157-263 (347)
426 PRK08945 putative oxoacyl-(acy 94.1 0.22 4.7E-06 44.1 7.8 41 183-224 8-49 (247)
427 PRK06113 7-alpha-hydroxysteroi 94.1 0.28 6E-06 43.7 8.4 79 186-266 10-98 (255)
428 PRK07424 bifunctional sterol d 94.1 0.31 6.7E-06 46.7 9.0 74 186-266 177-255 (406)
429 PRK05597 molybdopterin biosynt 94.1 0.32 6.9E-06 45.8 9.0 36 186-221 27-62 (355)
430 COG2910 Putative NADH-flavin r 94.0 0.35 7.7E-06 40.4 8.0 92 189-290 2-106 (211)
431 PRK14189 bifunctional 5,10-met 94.0 0.37 8.1E-06 43.6 8.9 95 166-290 137-232 (285)
432 PRK07984 enoyl-(acyl carrier p 94.0 0.37 8E-06 43.3 9.0 78 186-265 5-93 (262)
433 PRK14982 acyl-ACP reductase; P 94.0 0.23 5.1E-06 46.2 7.8 93 185-290 153-248 (340)
434 PRK08063 enoyl-(acyl carrier p 94.0 0.26 5.7E-06 43.5 8.0 79 186-266 3-92 (250)
435 KOG1252 Cystathionine beta-syn 94.0 0.34 7.4E-06 44.2 8.4 57 179-236 95-155 (362)
436 PRK13403 ketol-acid reductoiso 93.9 0.78 1.7E-05 42.2 10.8 86 184-284 13-102 (335)
437 PRK05557 fabG 3-ketoacyl-(acyl 93.9 0.34 7.4E-06 42.5 8.6 79 186-266 4-93 (248)
438 PRK05600 thiamine biosynthesis 93.9 0.39 8.5E-06 45.5 9.3 35 186-220 40-74 (370)
439 PRK06171 sorbitol-6-phosphate 93.9 0.2 4.4E-06 44.9 7.1 76 186-266 8-87 (266)
440 PLN02520 bifunctional 3-dehydr 93.9 0.22 4.7E-06 49.6 7.8 71 186-266 378-449 (529)
441 PRK08287 cobalt-precorrin-6Y C 93.9 0.81 1.8E-05 38.7 10.4 97 180-287 25-130 (187)
442 PTZ00098 phosphoethanolamine N 93.8 0.3 6.5E-06 44.0 8.1 103 178-289 44-157 (263)
443 COG0334 GdhA Glutamate dehydro 93.8 0.25 5.5E-06 46.6 7.6 59 161-222 182-241 (411)
444 PRK12938 acetyacetyl-CoA reduc 93.8 0.32 6.8E-06 42.9 8.2 79 186-266 2-91 (246)
445 PF01210 NAD_Gly3P_dh_N: NAD-d 93.8 0.38 8.3E-06 39.5 8.0 84 189-279 1-91 (157)
446 PF02670 DXP_reductoisom: 1-de 93.8 0.76 1.6E-05 36.3 9.1 90 190-280 1-114 (129)
447 PRK04266 fibrillarin; Provisio 93.8 1.1 2.4E-05 39.2 11.3 102 180-287 66-175 (226)
448 PLN02244 tocopherol O-methyltr 93.7 0.21 4.5E-06 46.8 7.1 96 185-289 117-224 (340)
449 PRK07370 enoyl-(acyl carrier p 93.7 0.27 5.9E-06 43.9 7.7 102 186-290 5-149 (258)
450 PRK01438 murD UDP-N-acetylmura 93.7 0.53 1.2E-05 46.3 10.3 69 186-266 15-88 (480)
451 PRK07792 fabG 3-ketoacyl-(acyl 93.7 0.42 9.1E-06 44.0 9.0 80 186-266 11-99 (306)
452 PRK14618 NAD(P)H-dependent gly 93.7 0.65 1.4E-05 43.2 10.3 94 188-289 5-105 (328)
453 PF13823 ADH_N_assoc: Alcohol 93.7 0.073 1.6E-06 28.2 2.2 22 2-24 1-22 (23)
454 COG1648 CysG Siroheme synthase 93.6 0.91 2E-05 39.3 10.3 95 186-291 11-106 (210)
455 TIGR00138 gidB 16S rRNA methyl 93.6 0.57 1.2E-05 39.6 8.9 91 187-287 43-141 (181)
456 PRK03562 glutathione-regulated 93.6 0.55 1.2E-05 47.8 10.3 78 187-269 400-477 (621)
457 TIGR01505 tartro_sem_red 2-hyd 93.6 0.7 1.5E-05 42.2 10.2 70 189-271 1-70 (291)
458 PRK09135 pteridine reductase; 93.6 0.43 9.4E-06 42.0 8.7 35 186-221 5-40 (249)
459 PRK08416 7-alpha-hydroxysteroi 93.6 0.41 8.9E-06 42.7 8.6 78 186-265 7-96 (260)
460 PRK10669 putative cation:proto 93.6 0.58 1.3E-05 47.1 10.4 93 188-286 418-513 (558)
461 COG0569 TrkA K+ transport syst 93.5 0.77 1.7E-05 40.3 9.9 83 189-277 2-86 (225)
462 PF01564 Spermine_synth: Sperm 93.5 0.32 7E-06 43.3 7.6 95 186-288 76-191 (246)
463 TIGR02415 23BDH acetoin reduct 93.5 0.4 8.7E-06 42.5 8.3 77 188-266 1-87 (254)
464 KOG1199 Short-chain alcohol de 93.5 0.41 9E-06 39.4 7.4 80 186-266 8-93 (260)
465 COG1052 LdhA Lactate dehydroge 93.5 0.81 1.8E-05 42.4 10.4 89 185-289 144-237 (324)
466 cd05211 NAD_bind_Glu_Leu_Phe_V 93.5 0.28 6E-06 42.8 6.9 47 185-231 21-77 (217)
467 cd05191 NAD_bind_amino_acid_DH 93.5 0.6 1.3E-05 34.0 7.8 35 185-219 21-55 (86)
468 PLN02735 carbamoyl-phosphate s 93.4 0.57 1.2E-05 50.9 10.6 99 168-273 4-115 (1102)
469 PRK06522 2-dehydropantoate 2-r 93.4 0.99 2.1E-05 41.3 11.0 92 189-287 2-99 (304)
470 PF07991 IlvN: Acetohydroxy ac 93.4 1.3 2.9E-05 36.3 10.3 86 186-287 3-93 (165)
471 PRK12480 D-lactate dehydrogena 93.4 0.94 2E-05 42.2 10.8 87 185-289 144-235 (330)
472 cd05212 NAD_bind_m-THF_DH_Cycl 93.4 0.71 1.5E-05 37.1 8.7 95 166-290 7-102 (140)
473 PF02737 3HCDH_N: 3-hydroxyacy 93.4 0.49 1.1E-05 39.9 8.1 38 189-227 1-38 (180)
474 PRK12825 fabG 3-ketoacyl-(acyl 93.4 0.44 9.4E-06 41.8 8.3 78 186-265 5-93 (249)
475 PRK12745 3-ketoacyl-(acyl-carr 93.4 0.44 9.5E-06 42.3 8.3 77 188-266 3-90 (256)
476 PRK05708 2-dehydropantoate 2-r 93.4 0.54 1.2E-05 43.3 9.1 95 188-288 3-104 (305)
477 PF02719 Polysacc_synt_2: Poly 93.3 0.5 1.1E-05 42.9 8.5 75 190-266 1-87 (293)
478 PRK06141 ornithine cyclodeamin 93.3 0.77 1.7E-05 42.5 10.0 94 185-290 123-221 (314)
479 PRK11036 putative S-adenosyl-L 93.3 1.1 2.4E-05 40.0 10.8 93 185-287 43-148 (255)
480 PRK03659 glutathione-regulated 93.2 0.67 1.5E-05 47.0 10.3 94 188-287 401-497 (601)
481 PRK08936 glucose-1-dehydrogena 93.2 0.5 1.1E-05 42.2 8.5 79 186-266 6-95 (261)
482 PLN02986 cinnamyl-alcohol dehy 93.2 0.55 1.2E-05 43.4 9.0 37 186-223 4-41 (322)
483 PRK07775 short chain dehydroge 93.2 0.81 1.8E-05 41.2 10.0 79 186-266 9-97 (274)
484 PRK07066 3-hydroxybutyryl-CoA 93.2 1.4 3.1E-05 40.8 11.5 38 188-226 8-45 (321)
485 PRK07889 enoyl-(acyl carrier p 93.2 0.39 8.5E-06 42.9 7.8 79 186-266 6-95 (256)
486 PRK05565 fabG 3-ketoacyl-(acyl 93.1 0.48 1E-05 41.6 8.2 78 187-266 5-93 (247)
487 TIGR00452 methyltransferase, p 93.1 1.3 2.9E-05 40.8 11.1 101 175-287 110-224 (314)
488 COG0673 MviM Predicted dehydro 93.0 2.7 6E-05 39.0 13.5 91 189-290 5-99 (342)
489 PF01408 GFO_IDH_MocA: Oxidore 93.0 2.3 5E-05 32.8 11.0 88 189-289 2-93 (120)
490 PRK07578 short chain dehydroge 93.0 2.4 5.1E-05 36.0 12.0 86 189-290 2-113 (199)
491 PRK11559 garR tartronate semia 93.0 1.1 2.4E-05 41.0 10.5 70 189-271 4-73 (296)
492 PRK06947 glucose-1-dehydrogena 92.9 0.46 1E-05 41.9 7.8 77 188-266 3-90 (248)
493 PRK07819 3-hydroxybutyryl-CoA 92.9 1.1 2.3E-05 40.9 10.2 38 188-226 6-43 (286)
494 PRK09134 short chain dehydroge 92.9 0.57 1.2E-05 41.7 8.4 79 186-266 8-97 (258)
495 PRK12935 acetoacetyl-CoA reduc 92.9 0.63 1.4E-05 41.0 8.6 79 186-266 5-94 (247)
496 PRK06436 glycerate dehydrogena 92.9 0.69 1.5E-05 42.5 8.9 35 185-220 120-154 (303)
497 PLN02256 arogenate dehydrogena 92.8 1.6 3.6E-05 40.1 11.4 91 184-289 33-128 (304)
498 KOG1207 Diacetyl reductase/L-x 92.8 0.43 9.3E-06 39.4 6.6 46 186-232 6-52 (245)
499 PF10727 Rossmann-like: Rossma 92.8 0.36 7.8E-06 38.1 6.1 78 188-279 11-90 (127)
500 TIGR01472 gmd GDP-mannose 4,6- 92.8 0.37 8.1E-06 45.0 7.4 34 188-222 1-35 (343)
No 1
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.9e-69 Score=463.76 Aligned_cols=369 Identities=74% Similarity=1.264 Sum_probs=358.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||++.|++++||.++++.+++|+..||+||+.++++|++|.+.|+|..+...+|.++|||.+|+|+++|..|+++++|
T Consensus 7 ~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~G 86 (375)
T KOG0022|consen 7 TCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPG 86 (375)
T ss_pred EEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCC
Confidence 58999999999999999999999999999999999999999999999998877899999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|+......|+.|.+|+++..|+|.+++..+..+..+.||++|+.-+|+.+||++++.+|+||.+++...+++|++..+
T Consensus 87 D~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aP 166 (375)
T KOG0022|consen 87 DHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAP 166 (375)
T ss_pred CEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCC
Confidence 99999999999999999999999999999998888887899999999999999999999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++.++++.|...|+|.|.+..+.+++|++|.|.|-|++|+++++-||+.||.++++++.+++|.+.+++||+.+++|+.+
T Consensus 167 l~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d 246 (375)
T KOG0022|consen 167 LEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD 246 (375)
T ss_pred hhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.....++.+.+.|++|+|+.|+|+|+.+++++++.+...+||+-|.+|....++.+++.++.++.++++.|+.++.++.+
T Consensus 247 ~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~ 326 (375)
T KOG0022|consen 247 LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSK 326 (375)
T ss_pred ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccch
Confidence 65678899999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.+++.+++.+.++++++.++|+|++||+++++||+.|.+++.+|.||.+
T Consensus 327 ~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 327 SDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred hhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999864
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=5.4e-68 Score=466.89 Aligned_cols=365 Identities=62% Similarity=1.077 Sum_probs=352.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
++||++.+++++||+++++++++|+++||+||+.++|+|++|.+.+.|..++. +|.++|||.+|+|+++|+.|+++++|
T Consensus 2 k~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpG 80 (366)
T COG1062 2 KTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPG 80 (366)
T ss_pred CceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCCC
Confidence 58999999999999999999999999999999999999999999999999988 99999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|+.....+|+.|.+|+.+..++|+........|.. +||+.|++.+|+.++|++|..+|++|..+++.+++|++++.+
T Consensus 81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 9999999999999999999999999999999888854 999999999999999999999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++.++++.|...|.+.+..+.+++++|++|.|.|.|++|++++|-|+..|++++++++.+++|++++++||+.+++|..+
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.. +..+.+.++|++|+|.+|||+|+.+.+++++++..+ ||+.+.+|.......++++++.++.+++|+|+.++....+
T Consensus 240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~ 317 (366)
T COG1062 240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317 (366)
T ss_pred hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence 32 689999999999999999999999999999999999 5999999998888899999999998999999999988888
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.+++.+++++.+|++++.+++++.++|+|+++||+.|.+++.+|.||+|
T Consensus 318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 9999999999999999999999999999999999999999999988875
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.6e-64 Score=455.13 Aligned_cols=333 Identities=34% Similarity=0.512 Sum_probs=303.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.++++|+++.+++.|+|.++||+|+|+++|+|++|++.++|.++...+|.+||||++|+|+++|++|++|++|
T Consensus 3 ~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~G 82 (339)
T COG1064 3 TMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKVG 82 (339)
T ss_pred ceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEee-cCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|||.+ +...+|+.|++|+.|+++.|++... .|++ .+| +|+||+++++.+++++|+++
T Consensus 83 DrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~G------------------Gyaeyv~v~~~~~~~iP~~~ 140 (339)
T COG1064 83 DRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TDG------------------GYAEYVVVPARYVVKIPEGL 140 (339)
T ss_pred CEEEecCccCCCCCCccccCcccccCCCccc---ccee-ecC------------------cceeEEEEchHHeEECCCCC
Confidence 99988 8899999999999999999998664 4555 566 99999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.+.|+..|+|++| +..+++||++|+|+|+|++|++|+|+|+++|+ +|++++++++|.++++++|++++++..
T Consensus 141 d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 141 DLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS 218 (339)
T ss_pred ChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence 9999999999999999998 55999999999999999999999999999998 999999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
+ .+..+.+++. +|+++++++ +.+++.+++.|+++ |+++.+|........+++.+.++ +++++.|+..++
T Consensus 219 ~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~-- 288 (339)
T COG1064 219 D--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT-- 288 (339)
T ss_pred C--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC--
Confidence 4 6666666664 999999999 79999999999997 99999999742333456666555 499999998875
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
+.++++++++.+++++++. +.+.++++|+++||+.|++++.. |.||.+.
T Consensus 289 -~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 -RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred -HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 3689999999999998754 43799999999999999999987 9998874
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.5e-59 Score=405.13 Aligned_cols=341 Identities=27% Similarity=0.415 Sum_probs=296.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCC---CCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~---~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+|+|+++.++++ +++.+.|.|++ .|+||+|++.++|||++|+|.++...... +.|+++|||.+|+|+++|+.|++
T Consensus 4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~ 82 (354)
T KOG0024|consen 4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH 82 (354)
T ss_pred ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence 489999999999 99999999987 99999999999999999999997655333 58999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||||++.|..+|+.|++|+.|.+|+|...... +..+.+| ++++|++.++++++|||
T Consensus 83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKLP 141 (354)
T ss_pred cccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeCC
Confidence 99999999999999999999999999999987753 2222445 99999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
|++|++++|++. +++++|+|. +++++++|++|||+|||++|+.+...||++|+.+|+.++..++|++++++||++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999887 799999986 889999999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCC--chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEee
Q 017431 237 NPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 312 (371)
Q Consensus 237 ~~~~~~--~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~ 312 (371)
+..... ..+.+.+....+. .+|+.|||+|...+++.++.+++.+ |++++.|.-. ...+++..... +++.++|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~--~~~~fpi~~v~~kE~~~~g~ 296 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGA--EEIQFPIIDVALKEVDLRGS 296 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCC--CccccChhhhhhheeeeeee
Confidence 654422 2333444444444 6999999999999999999999996 9999888743 34566655543 48889888
Q ss_pred ecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEEecCC
Q 017431 313 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKMQD 371 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~~d 371 (371)
+-. ...+++..++++++|++++++++++.|+++++.+||+.+..++. .|+++...+
T Consensus 297 fry---~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 297 FRY---CNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eee---ccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 643 23589999999999999999999999999999999999988774 499998754
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.9e-56 Score=386.29 Aligned_cols=341 Identities=30% Similarity=0.472 Sum_probs=299.0
Q ss_pred CcceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
+.+++.+..+++ ++++.+++.|++.++||+|+|+++|||++|++.+.|.++..++|.++|||++|+|+++|++|++|+
T Consensus 9 k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~k 88 (360)
T KOG0023|consen 9 KQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFK 88 (360)
T ss_pred hhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCccccc
Confidence 357889999988 578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEE-eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 79 PGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
+|||| +-....+|..|++|+.++++.|.+. ...+.|+. .||.+ .+|+|++|+++++.++++||+
T Consensus 89 iGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~-~~t~~g~~-~DGt~-------------~~ggf~~~~~v~~~~a~kIP~ 153 (360)
T KOG0023|consen 89 IGDRVGVGWLNGSCLSCEYCKSGNENYCPKM-HFTYNGVY-HDGTI-------------TQGGFQEYAVVDEVFAIKIPE 153 (360)
T ss_pred ccCeeeeeEEeccccCccccccCCcccCCce-eEeccccc-cCCCC-------------ccCccceeEEEeeeeEEECCC
Confidence 99999 4555778999999999999999963 22345555 66633 346899999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi 236 (371)
+++.+.||.+.|+..|.|.+| ...++.||++|-|.|+|++|.+++|+||+||+ +|+++++++ +|.+.++.||++..+
T Consensus 154 ~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv 231 (360)
T KOG0023|consen 154 NLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFV 231 (360)
T ss_pred CCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeE
Confidence 999999999999999999998 66778899999999997799999999999999 999998887 677788899999988
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecC
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 315 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 315 (371)
+..+ +.++.+.+.+.+++++|-+.+. ..+.++.++.+|+.+ |++|.+|.+.. .+.++.+++.- .+++.|+..+
T Consensus 232 ~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG 305 (360)
T KOG0023|consen 232 DSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVG 305 (360)
T ss_pred EecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeeccc
Confidence 8773 3889999999988888888876 335699999999997 99999999754 66777777655 7899999887
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
+. .+.++++++.+++.++.. ....+++++++||+.|++++.. |.||.+.
T Consensus 306 ~~---ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 306 SR---KETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred cH---HHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 54 689999999999998754 4788999999999999999997 9998864
No 6
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.8e-55 Score=415.13 Aligned_cols=368 Identities=66% Similarity=1.150 Sum_probs=305.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++..++++++++++|.|+|.++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~G 80 (368)
T TIGR02818 1 KSRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVG 80 (368)
T ss_pred CceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCC
Confidence 58999999998889999999999999999999999999999999999887655689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+..++|.+.......|.. .+|..++..+|...+++.+.|+|+||+.+|.+.++++|++++
T Consensus 81 drV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~ 159 (368)
T TIGR02818 81 DHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAP 159 (368)
T ss_pred CEEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCC
Confidence 9999999999999999999999999865432222322 122111111222223333457999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|++.++++.+
T Consensus 160 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~ 239 (368)
T TIGR02818 160 LEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND 239 (368)
T ss_pred HHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc
Confidence 99999999999999999888889999999999999999999999999999977999999999999999999999998765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+.++.+.+.+++++++|++|||+|++..+..+++++++++|+++.+|.......+++.+..+..+..+.++..+....+
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 319 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGR 319 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcH
Confidence 33456677778877789999999998788999999998733999999975433334444444444445666655443334
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.++++++++++++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 320 ~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 320 TELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 5789999999999998888899999999999999999888777999875
No 7
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-54 Score=411.29 Aligned_cols=367 Identities=78% Similarity=1.281 Sum_probs=309.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++..+++++++++.|.|+|.++||+|||+++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999998889999999999999999999999999999999998877655789999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+..+.|.+.....+.|.. .+|..++..+|...+++.+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999875432222322 222222222344444444567999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++.+
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999999888889999999999999999999999999999977999999999999999999999998776
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+.++.+.+.+++++++|++||++|++..+..+++++++++|+++.+|....+..+++.+..+..+..+.++..+.+...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 32357777888887799999999998778999999998734999999875332334444444444456667766656556
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
++++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|+
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 789999999999999988889999999999999999998887799875
No 8
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.9e-54 Score=411.23 Aligned_cols=369 Identities=53% Similarity=1.027 Sum_probs=306.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
+|||+++.+++++++++++|.|+|.++||+|||+++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|++
T Consensus 10 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~v 89 (381)
T PLN02740 10 TCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKA 89 (381)
T ss_pred eeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCCC
Confidence 4999999999988999999999999999999999999999999999987642 357899999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCcccccc--CCcceeeccCCcceeeeEEecccceEecCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
||||++.+..+|+.|.+|..+..+.|.+.......+....+|..+... .+...+++...|+|+||++++.+.++++|+
T Consensus 90 GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~ 169 (381)
T PLN02740 90 GDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDP 169 (381)
T ss_pred CCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCC
Confidence 999999999999999999999999998765321110000011000000 011112223357999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++++.+++++.|||+++++..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|++++++
T Consensus 170 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~ 249 (381)
T PLN02740 170 NAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFIN 249 (381)
T ss_pred CCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEe
Confidence 99999999999999999998888899999999999999999999999999999967999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
+.+.+.++.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+++.+..+.+++++.|+..+.+
T Consensus 250 ~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 329 (381)
T PLN02740 250 PKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDF 329 (381)
T ss_pred cccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCC
Confidence 76533357777888776689999999999888999999998833999999976433334555444445788888877665
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
....+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 330 ~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 330 KGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred CcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 4445789999999999998888899999999999999999988878999874
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.8e-54 Score=410.38 Aligned_cols=360 Identities=41% Similarity=0.715 Sum_probs=303.7
Q ss_pred cceEEeecCCC--------CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCC
Q 017431 2 CKAAVAWEPNK--------PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 2 ~~a~~~~~~~~--------~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
|||+++.++|+ +++++++|.|+|.++||+|||.+++||++|++.+.|..+. .+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR-PLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC-CCCccCCccceeEEEEeCCC
Confidence 89999999874 3999999999999999999999999999999999887543 47899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceE
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 153 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 153 (371)
++++++||||++.+..+|+.|..|+.+.++.|.+.......|.. .+|..++..++....+..+.|+|++|+.++++.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999876543222322 22211111112112223344699999999999999
Q ss_pred ecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc
Q 017431 154 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233 (371)
Q Consensus 154 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~ 233 (371)
++|+++++++|+.++++++|||+++.+..++++|++|||.|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999988888999999999999999999999999999997799999999999999999999
Q ss_pred EEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEee
Q 017431 234 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 312 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~ 312 (371)
+++++.+ .++.+.+++.+++++|++|||+|.+..+..++++++++ |+++.+|.......++++...+. +++++.|+
T Consensus 239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 9998876 67778888887778999999999878899999999996 99999987543234455555444 48899998
Q ss_pred ecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEE
Q 017431 313 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCV 366 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvv 366 (371)
....+...++++.++++++++++++.++++++|+|+|+++|++.+.+++.. |+|
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 776554456789999999999999888899999999999999999998887 544
No 10
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=4.5e-54 Score=407.53 Aligned_cols=367 Identities=65% Similarity=1.164 Sum_probs=309.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+++++++++++|+|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 69999999998889999999999999999999999999999999999877655789999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+.++.|.........|....++..++...|...+++...|+|++|+.++.+.++++|++++
T Consensus 82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~ 161 (369)
T cd08301 82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP 161 (369)
T ss_pred CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence 99999999999999999999999998764321122111111111122233334444457999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||++++...++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++.+
T Consensus 162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 241 (369)
T cd08301 162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD 241 (369)
T ss_pred HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence 99999999999999998888889999999999999999999999999999877999999999999999999998888765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+..+.+.+++.+++++|++||++|+...+..+++++++++|+++.+|....+..+++.+..+.+++++.|+....+..+
T Consensus 242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 321 (369)
T cd08301 242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPK 321 (369)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChH
Confidence 33456677777776689999999998778899999999922999999986433345555544556889999877666555
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEE
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 367 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl 367 (371)
.+++.+++++.++++++.++++++|+|+|+++|++.+++++..|++|
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 322 TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 67899999999999988888899999999999999999998889887
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=3.6e-53 Score=399.63 Aligned_cols=356 Identities=36% Similarity=0.619 Sum_probs=300.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.+++++++++++|.|+|.++||+|||.++++|++|++.+.|..+. .+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND-EFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc-cCCcccccceEEEEEEeCCCCcccCCC
Confidence 7999999999999999999999999999999999999999999999887543 478999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|..|+.++.+.|....... ......+| -...+..+.|+|+||+.++++.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~-~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNAT-QKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCccccc-cccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 99999999999999999999999997532110 00000001 0000111246999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++.+.++|+++.+...+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++.+
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988878889999999999999999999999999999966999999999999999999999998876
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
.++.+.+.+.+++ ++|++|||+|++..++.++++++++ |+++.+|........+++...+. ++.++.+++.....
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 6677888888887 8999999999877899999999996 99999997543233455544433 47888887654333
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
..+++++++++++++++++.++++++|+++|+++|++.+++++..|+++.+
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 346788999999999999888899999999999999999988878888753
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.8e-52 Score=395.47 Aligned_cols=364 Identities=53% Similarity=1.016 Sum_probs=297.4
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.++++.++++++|+|+|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|++|
T Consensus 12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~G 88 (378)
T PLN02827 12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEKG 88 (378)
T ss_pred eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCCC
Confidence 49999999988779999999999999999999999999999999887752 368899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+.++.|.+.... ..|....++..++...|...+++...|+|++|+.++++.++++|++++
T Consensus 89 drV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~ 167 (378)
T PLN02827 89 DHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP 167 (378)
T ss_pred CEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence 9999999999999999999999999864210 001000000000000010001111236999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++++.+++++.++|++++...++++|++|||+|+|++|++++|+|+++|+.+|+++++++++.++++++|+++++++.+
T Consensus 168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~ 247 (378)
T PLN02827 168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND 247 (378)
T ss_pred HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence 99999998898999988877788999999999999999999999999999967888988999999999999999998765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc--hheeeceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP--FQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~ 318 (371)
.+.++.+.+++.+++++|++||++|.+..+..+++.+++++|+++.+|..... ..+.. ..+.+++++.|+....+.
T Consensus 248 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
T PLN02827 248 LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFGGWK 325 (378)
T ss_pred cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecCCCc
Confidence 32467777888776689999999999777999999999933999999975432 23322 233458899988776554
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
...++..++++++++++++.++++++|+|+|+++|++.+.+++..|+||.+-
T Consensus 326 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 326 PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 4457889999999999998778999999999999999999988789999863
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3.6e-52 Score=393.76 Aligned_cols=364 Identities=62% Similarity=1.103 Sum_probs=305.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+.+++++++++|.|++.++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++|
T Consensus 2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08277 2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPG 80 (365)
T ss_pred ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCC
Confidence 589999999888899999999999999999999999999999999988765 4578999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|.+|..+..++|++.... ..|.. .++.......|+..+++.+.|+|++|+.++.+.++++|++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 9999999999999999999999999876532 11221 222111112233333333457999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++..+
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~ 238 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD 238 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence 99999999999999998888889999999999999999999999999999977999999999999999999999988765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+..+.+.+++.+++++|++|||+|+...+..+++++++++|+++.+|... +...++++..+..++++.++..+.+...
T Consensus 239 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 317 (365)
T cd08277 239 SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLILGRTWKGSFFGGFKSR 317 (365)
T ss_pred ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhhCCEEEeeecCCCChH
Confidence 333456677777766899999999987888999999987349999998753 2233445544445788888877666545
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
.++++++++++++.+++.++++++|+|+|+++|++.+.+++..|++|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 678999999999999888889999999999999999998886798874
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.7e-51 Score=385.70 Aligned_cols=337 Identities=28% Similarity=0.438 Sum_probs=289.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.+.... ..+|.++|||++|+|+++|++++++++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 89999998765 999999999999999999999999999999988776432 2358899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|..|+.++++.|..... .+|.. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999986542 22322 23 4999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++ ...++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999987 5577899999999999999999999999999955999999999999999999999998876
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (371)
.+ .+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|+....
T Consensus 218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence 44 5667777777 8999999999977778999999996 99999987532 22222122233588888876543
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.++++++++++.++++++.++++++|+|+|+++|++.++++...|+||++
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 35789999999999998888899999999999999999887756999875
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=5.2e-50 Score=375.95 Aligned_cols=335 Identities=21% Similarity=0.299 Sum_probs=275.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCcccccccc-CCCC--CCCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
+|||+++.+++. +++++.|.| +.++||+|||.+++||++|++.+. |..+ ..++|.++|||++|+|+++ ++++|
T Consensus 4 ~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~ 79 (343)
T PRK09880 4 KTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL 79 (343)
T ss_pred cceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence 479999998888 999999997 689999999999999999999875 4332 2357999999999999999 67899
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+..+|+.|.+|+.+.++.|.+... +|.... +....|+|+||++++++.++++|+
T Consensus 80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~--------------~~~~~G~~aey~~v~~~~~~~~P~ 142 (343)
T PRK09880 80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMY--------------FPHVDGGFTRYKVVDTAQCIPYPE 142 (343)
T ss_pred CCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccc--------------cCCCCCceeeeEEechHHeEECCC
Confidence 999999999999999999999999999987542 221100 000124999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++++ +..++++||+++.+ ....+|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|++++++
T Consensus 143 ~l~~~~aa-~~~~~~~a~~al~~-~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~ 220 (343)
T PRK09880 143 KADEKVMA-FAEPLAVAIHAAHQ-AGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN 220 (343)
T ss_pred CCCHHHHH-hhcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99987655 44578899998744 45668999999999999999999999999978999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 316 (371)
+.+ .++.+.. +. .+++|++|||+|++.+++.++++++++ |+++.+|.... ..+++...+ .+++++.++...
T Consensus 221 ~~~--~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~~- 292 (343)
T PRK09880 221 PQN--DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFRF- 292 (343)
T ss_pred CCc--ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEeec-
Confidence 876 3443322 22 236999999999977899999999997 99999997532 234444443 347888887532
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+++++++++++++++++.++++++|+|+|+++|++.+.+++.. |++|.+
T Consensus 293 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ---TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ---cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 35799999999999999888899999999999999999887764 999874
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.7e-49 Score=371.01 Aligned_cols=342 Identities=28% Similarity=0.396 Sum_probs=280.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~-v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|++++++.+++...+++.+.|.+.+++|+|||.++|||++|++.++|..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 67888888776455777877778999999999999999999999999877766666 89999999999999 77889999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceec-CCCccccccCCcceeeccCCcceeeeEEecccceEe-cCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM-NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK-IDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~-lP~~ 158 (371)
|||++.+..+|+.|.+|+.+.++.|.+.+......... .+| +|+||+++|.++.++ +|++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G------------------~~aEyv~vp~~~~~~~~pd~ 141 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG------------------GFAEYVRVPADFNLAKLPDG 141 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC------------------ceEEEEEeccccCeecCCCC
Confidence 99999999999999999999999999554321111110 234 999999999765555 4888
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~ 237 (371)
+ +.+++++.-++.++|++........++.+|+|+|+|++|++++++++.+|+.+|++++.+++|++++++ .|++.+++
T Consensus 142 ~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~ 220 (350)
T COG1063 142 I-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVN 220 (350)
T ss_pred C-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeec
Confidence 8 566667777999998874455556666699999999999999999999999999999999999999999 66665665
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
..+ .+....+.+.+++ ++|++|||+|.+.+++.+++.++++ |+++.+|.+..... .++...+ .+++++.|+...
T Consensus 221 ~~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~ 296 (350)
T COG1063 221 PSE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP 296 (350)
T ss_pred Ccc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC
Confidence 544 3566778889988 9999999999999999999999996 99999998753322 3333333 458999998421
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~ 369 (371)
....+++.++++++++++++.+++++.++++++++|++.+.+.+. .|+++++
T Consensus 297 --~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 297 --SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred --CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 223589999999999999999999999999999999999987543 4999864
No 17
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=9.8e-50 Score=367.90 Aligned_cols=315 Identities=26% Similarity=0.367 Sum_probs=264.5
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.+.++| ++++++|.|.|.++||+|||++++||+.|.+..+|. .+..++|.++|.|++|+|+++|+.|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 899999999987 889999999999999999999999999999999997 33446899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||+..+ ..| . .|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~~---------------------------~------------------~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GVG---------------------------R------------------DGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CCC---------------------------C------------------CCcceeEEEecHHHceeCCCC
Confidence 999998652 000 1 249999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+|+++||+++++++|||++++...++++|++|||+|+ |++|.+++||||++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999999999999999976 9999999999999998 6666667777777999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+.+ .+|.+.+++++++ ++|+|+|++|+ +.+..++++|+++ |+++.+|.........++...+. +..+..++...
T Consensus 194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YRE--EDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCc--ccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 988 6699999999999 99999999999 5588899999997 99999998642233344433333 26666666654
Q ss_pred CC---cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCC-Cee-EEEEec
Q 017431 316 GF---KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DCL-RCVLKM 369 (371)
Q Consensus 316 ~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~-~~~-kvvl~~ 369 (371)
.. ...+.+.++.+++.++++++ .+.++|||+|..+|....... +.. |+||++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 33 11345667899999999764 477999999966666644443 554 999874
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.5e-49 Score=376.12 Aligned_cols=345 Identities=24% Similarity=0.367 Sum_probs=273.1
Q ss_pred cceEEeecCCCCeEEEEeeCCCCC-------CCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
|||+++.++++ ++++++|.|+|+ ++||+|||+++|||++|++.+.|..+. .+|.++|||++|+|+++|++|
T Consensus 3 mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 3 NRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA-PTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred ceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC-CCCccccceeEEEEEEEcCcc
Confidence 89999999887 999999999874 689999999999999999999886543 478999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCC---ccceecCCCccccccCCcceeeccCCcceeeeEEeccc-
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV- 150 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 150 (371)
++|++||||++.+..+|+.|.+|+.++++.|.+..... .+|.... | . -.|+|+||+.+|..
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~------------~--~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G------------G--WVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C------------C--CCCceEEEEEechhh
Confidence 99999999999999999999999999999998643110 1121000 0 0 02499999999964
Q ss_pred -ceEecCCCCCc----chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 151 -SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 151 -~v~~lP~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
.++++|++++. .+++.+..++.++|+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++|.+
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998754 34677777899999987 4578999999999989999999999999999966777778888999
Q ss_pred HHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCH--------------HHHHHHHHHhccCCceEEEEccC
Q 017431 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 226 ~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++++|++. +++.. +.++.+.+.+++++ ++|++||++|.+ .+++.++++++++ |+++.+|.+
T Consensus 225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~ 301 (393)
T TIGR02819 225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLY 301 (393)
T ss_pred HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeec
Confidence 999999974 44432 14566777888877 899999999985 4799999999997 999999986
Q ss_pred CCCCcc-----------cccchhe-eeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCcee-eeeecccHHHHHHHH
Q 017431 291 ASGQEI-----------STRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRYM 357 (371)
Q Consensus 291 ~~~~~~-----------~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~A~~~~ 357 (371)
..+... ++....+ .+++++.+.. ....+..+.+++++.++++++.++++ ++|+|+|+++||+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~ 378 (393)
T TIGR02819 302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEF 378 (393)
T ss_pred CCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHH
Confidence 321111 1111111 1234444421 11112346799999999999877776 789999999999999
Q ss_pred hCCCeeEEEEecC
Q 017431 358 HGGDCLRCVLKMQ 370 (371)
Q Consensus 358 ~~~~~~kvvl~~~ 370 (371)
.+++..|++|+++
T Consensus 379 ~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 379 DAGAAKKFVIDPH 391 (393)
T ss_pred hhCCceEEEEeCC
Confidence 9887779999874
No 19
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=5.9e-48 Score=365.61 Aligned_cols=366 Identities=56% Similarity=0.960 Sum_probs=302.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+||++++..+++++++++.|.|++.+++|+|||+++++|++|++.+.|... ..+|.++|||++|+|+++|++++.+++|
T Consensus 7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G 85 (373)
T cd08299 7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPG 85 (373)
T ss_pred eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCCC
Confidence 489999999988899999999999999999999999999999999988763 3478899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|.+|..+..+.|+........|.. .++..++..+|...+++.+.|+|++|++++.+.++++|++++
T Consensus 86 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~ 164 (373)
T cd08299 86 DKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP 164 (373)
T ss_pred CEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence 9999999899999999999999999875432212221 222222333343444444467999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++++.+++++.+||+++....++++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++..+
T Consensus 165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~ 244 (373)
T cd08299 165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD 244 (373)
T ss_pred hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc
Confidence 99999999999999998888899999999999999999999999999999877999999999999999999999888765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHh-ccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (371)
...++.+.+.+++++++|+++||+|++..+..++..+ +++ |+++.+|.......+++.+..+.++.++.++..+.+..
T Consensus 245 ~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
T cd08299 245 YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS 323 (373)
T ss_pred cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence 3234666677776668999999999867788877765 465 99999997543334455543344567888887766655
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
++++.++++.+.++.+++.++++++|+++++++|++.+.+++..|+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 56788888888888777777788999999999999999887777988864
No 20
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=6.6e-48 Score=362.46 Aligned_cols=338 Identities=22% Similarity=0.335 Sum_probs=279.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. +++++.|.|+| .++||+|||.++++|++|++.+.+.. ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 89999999876 99999999987 59999999999999999987532211 12368899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|.+|+.+.++.|..... .|.. .+ |+|++|+.++.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-RD------------------GGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-CC------------------CccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999975432 2221 23 4999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+. ++.++|+++ ....+++|++|||+|+|++|++++|+|+++|++.|+++++++++.++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998774 455677764 6678899999999999999999999999999966889999999999999999999998765
Q ss_pred CCchHHHHHHhhcCC-Ccc-EEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hhe-eeceEEEeeecCC
Q 017431 241 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQL-VTGRVWKGTAFGG 316 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~d-vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~~~~~~~g~~~~~ 316 (371)
.. .+.+.+.+.+ ++| ++|||+|+..++..++++++++ |+++.+|....+..++... ..+ .+++++.|+..+.
T Consensus 215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence 33 3456677766 898 9999999987899999999997 9999999754321121111 122 3478899876543
Q ss_pred Cc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.. ..+++++++++++++++++.++++++|+|+|+++|++.+.+++.. |+|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 21 135788999999999998888999999999999999999888765 999976
No 21
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=9.7e-48 Score=362.27 Aligned_cols=333 Identities=24% Similarity=0.364 Sum_probs=270.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
+.++...+..+++++.+++.|+|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 13 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGd 92 (360)
T PLN02586 13 AFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGD 92 (360)
T ss_pred eeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCCCC
Confidence 34445555555599999999999999999999999999999999988765446789999999999999999999999999
Q ss_pred EEeecCC-CCCCCCccccCCCCcccccccCCCc----cceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 82 HVIPCYQ-AECRECKFCKSGKTNLCGKVRGATG----AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 82 ~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
||++.+. .+|+.|.+|+.+.++.|.+...... .|.. .+ |+|+||+.++.+.++++|
T Consensus 93 rV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~~~lP 153 (360)
T PLN02586 93 RVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTK-NY------------------GGYSDMIVVDQHFVLRFP 153 (360)
T ss_pred EEEEccccCcCCCCccccCCCcccCCCccccccccccCCCc-CC------------------CccceEEEEchHHeeeCC
Confidence 9986554 4799999999999999986542100 0111 12 499999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~-~~~~~~~g~~~v 235 (371)
+++++++|+.+++.+.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++|++++
T Consensus 154 ~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~v 232 (360)
T PLN02586 154 DNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSF 232 (360)
T ss_pred CCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEE
Confidence 9999999999999999999988666777899999999999999999999999999 67777666554 557789999998
Q ss_pred ecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (371)
+++.+ . +.+.+.++ ++|++||++|.+.+++.++++++++ |+++.+|.... ..+++...+. ++..+.++..
T Consensus 233 i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~~~ 303 (360)
T PLN02586 233 LVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFPLVLGRKLVGGSDI 303 (360)
T ss_pred EcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHHHHhCCeEEEEcCc
Confidence 87654 2 23444443 6999999999877899999999996 99999987532 2344444433 3666767654
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+. ..++++++++++++++++. + ++|+|+|+++|++.+.+++.. |+|+++
T Consensus 304 ~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 304 GG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred CC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 32 2578999999999998753 3 689999999999999998875 999886
No 22
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.1e-47 Score=360.08 Aligned_cols=364 Identities=56% Similarity=0.993 Sum_probs=311.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+.+.++++++.|+|.+.+++|+|++.++++|++|++.+.|... ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 68999999988899999999999999999999999999999999888754 34678999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+..+|+.|.+|+.+..+.|.........|.. .+|..+.--+|...+|+.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999998899999999999999999987765555543 4554444445555666677789999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++|+.+++++.+||+++.....+.+|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|++++++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999998888999999999999889999999999999999668888889999999999999999887663
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc-cCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
+.++.+.+.+++++++|+++|++|....+..++++++ ++ |+++.+|....+...+++...+.++.++.|+.+..+...
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence 2267777777775599999999997778999999999 96 999999875323345555555544677888876666566
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
+.+..++++++++.+++.++.+++|+++++++|++.+.+++..|++|+
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 789999999999998876678899999999999999988877788763
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.9e-47 Score=359.07 Aligned_cols=334 Identities=23% Similarity=0.342 Sum_probs=263.2
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++..++.+++++++|.|+|.++||+|||+++++|++|++.++|..+. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 799999865434999999999999999999999999999999999887532 246889999999999999999 9999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+..+|+.|.+|+.+++++|...... ..|....+ |+|++|+.++++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence 999999999889999999999999999864321 11211122 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhh------hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHh
Q 017431 159 APLDKVCLLGCGVPTGLGAVW------NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN 229 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~------~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~---~~~~~~~~~~ 229 (371)
++ + ++++..++.+++.++. ...++++|++|||+|+|++|++++|+||++|+ +|+++++ +++|++++++
T Consensus 141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 3 4444445555544432 22336789999999999999999999999999 7998887 6789999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccccc----chh-ee
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR----PFQ-LV 304 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~----~~~-~~ 304 (371)
+|++. +++.+ .++.+ . + ..+++|++|||+|++..+..++++++++ |+++.+|.......++++ ... +.
T Consensus 218 ~Ga~~-v~~~~--~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSK--TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCc--cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99986 45544 33332 1 1 1238999999999977899999999997 999999976432333443 122 33
Q ss_pred eceEEEeeecCCCcccCcHHHHHHHHHcCCC----CCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 305 TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI----KVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
+++++.|+.... +++++.+++++.++.+ .+.++++++|+++|+++|++.+.++. .|++|++
T Consensus 291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 291 GNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 588888875432 3578899999988762 35667899999999999999887654 5999875
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=5.7e-47 Score=358.20 Aligned_cols=330 Identities=24% Similarity=0.340 Sum_probs=269.6
Q ss_pred EEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEe
Q 017431 5 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 84 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~ 84 (371)
++..+..+++++.+++.|+|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||||+
T Consensus 10 ~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~ 89 (375)
T PLN02178 10 WAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVG 89 (375)
T ss_pred EEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEEE
Confidence 33444445588899999999999999999999999999999988764445789999999999999999999999999998
Q ss_pred ecCCC-CCCCCccccCCCCcccccccCCCc----cceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 85 PCYQA-ECRECKFCKSGKTNLCGKVRGATG----AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
+.+.. +|+.|.+|+.++++.|.+...... .|.. . .|+|++|+.++++.++++|+++
T Consensus 90 ~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~------------------~G~~aey~~v~~~~~~~lP~~l 150 (375)
T PLN02178 90 VGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR-N------------------QGGYSDVIVVDHRFVLSIPDGL 150 (375)
T ss_pred EcCccCCCCCChhHhCcchhcCCCccccccccccCCCc-C------------------CCccccEEEEchHHeEECCCCC
Confidence 76655 699999999999999987542100 0111 1 2499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEec
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVN 237 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~ 237 (371)
++++|+.+++...|+|+++..... .++|++|+|.|+|++|++++|+|+++|+ +|++++++++ +.++++++|++++++
T Consensus 151 s~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~ 229 (375)
T PLN02178 151 PSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLV 229 (375)
T ss_pred CHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEc
Confidence 999999999999999998755443 3689999999999999999999999999 7888876654 478888999999988
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 316 (371)
+.+ . +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|.... ..+++...+. +++++.|+....
T Consensus 230 ~~~--~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~~~~~ 300 (375)
T PLN02178 230 TTD--S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRKMVGGSQIGG 300 (375)
T ss_pred CcC--H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCeEEEEeCccC
Confidence 654 2 34445443 7999999999977789999999996 99999987532 2344444443 478888876543
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+++++++++++++++++. + ++|+|+|+++|++.+.+++.. |+|+++
T Consensus 301 ---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 301 ---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred ---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 2578999999999998753 4 679999999999999998875 999986
No 25
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=8.5e-47 Score=355.02 Aligned_cols=333 Identities=29% Similarity=0.446 Sum_probs=279.6
Q ss_pred EEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017431 5 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 83 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V 83 (371)
+++.+++.++++++.|.|++.++||+|||.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 467788877999999999999999999999999999999887443 3233578999999999999999999887 99999
Q ss_pred eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC------
Q 017431 84 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------ 157 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~------ 157 (371)
++.+..+|+.|.+|+.+..+.|..... .|.. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence 999999999999999999999975432 2211 22 4999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++++.+++++.++|+++. ...+++|++|||+|+|++|++++|+|+++|+ +|+++++++++.++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999999999999999874 5789999999999999999999999999999 7999999999999999999999888
Q ss_pred CCCCC-chHHHHHHhhcCC-Ccc----EEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEE
Q 017431 238 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWK 310 (371)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~g-g~d----vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~ 310 (371)
+.+.+ .++.+.+++.+++ ++| ++|||+|+..++..++++++++ |+++.+|..... .+++...+. ++.++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAK--TEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCC--cccCHHHHhhcccEEE
Confidence 76522 2566778888887 886 8999999988888999999997 999999986432 233333333 366777
Q ss_pred eeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 311 GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 311 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
|++.. ...+++.++++++++++++.++++ +|+|+|+++||+.+.+++.. |+++++
T Consensus 294 g~~~~---~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 294 GNWGC---PPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEecC---CHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 76532 235789999999999998877664 79999999999999988876 888753
No 26
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.8e-46 Score=353.31 Aligned_cols=349 Identities=28% Similarity=0.432 Sum_probs=290.1
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC-----
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE----- 76 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~----- 76 (371)
.||+++.++++++++++.+.|.|+++||+|||.++++|++|++...|..+...+|.++|||++|+|+++|++++.
T Consensus 1 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~ 80 (361)
T cd08231 1 ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGE 80 (361)
T ss_pred CeEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCC
Confidence 479999999977999999999999999999999999999999999887653457889999999999999999986
Q ss_pred -CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc-ceEe
Q 017431 77 -VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAK 154 (371)
Q Consensus 77 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~v~~ 154 (371)
|++||+|++.+..+|+.|.+|+.+..+.|..... +|.....| + ....|+|++|+.++++ .+++
T Consensus 81 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~-------~-----~~~~g~~a~~~~v~~~~~~~~ 145 (361)
T cd08231 81 PLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCD-------D-----PHLSGGYAEHIYLPPGTAIVR 145 (361)
T ss_pred ccCCCCEEEEcccCCCCCChhHhCcCccccccchh---cccccccc-------C-----CCCCcccceEEEecCCCceEE
Confidence 9999999999999999999999999999986543 22110000 0 0012599999999996 7999
Q ss_pred cCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 155 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 155 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+|+++++++|+.++++++|||+++.+....++|++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.
T Consensus 146 lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~ 225 (361)
T cd08231 146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225 (361)
T ss_pred CCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCe
Confidence 99999999999998999999999977777779999999999999999999999999978999999999999999999999
Q ss_pred EecCCCCC-chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEe
Q 017431 235 FVNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKG 311 (371)
Q Consensus 235 vi~~~~~~-~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g 311 (371)
++++++.. ..+...+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|........++++..+ .++.++.+
T Consensus 226 vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
T cd08231 226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIG 304 (361)
T ss_pred EEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEE
Confidence 88876521 1233567788877 9999999999877789999999996 9999998754323334444332 34778877
Q ss_pred eecCCCcccCcHHHHHHHHHcC--CCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 312 TAFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
+... ..++++++++++.++ .+++.++++++|+++++++|++.+++++..|+||.+
T Consensus 305 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 305 VHNY---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred cccC---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 7643 235788899999887 666777789999999999999999888767999863
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.3e-46 Score=347.81 Aligned_cols=321 Identities=22% Similarity=0.312 Sum_probs=268.8
Q ss_pred EEeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 5 AVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 5 ~~~~~~~~----~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+.+.+++. +++++++|.|.|.++||+|||.++++|++|++.+.|..+....|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 55666663 48999999999999999999999999999999999876544457899999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|+|++.+. .+|+.|.+|..+.++.|..... .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 99987654 4699999999999999986542 2321 23 499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++++.+++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|.++++++|++++++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRALL-RASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 99999999999999999884 5789999999999999999999999999999 799999999999999999999988753
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 318 (371)
+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ...++...+ .+++++.++...
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~--- 281 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN--- 281 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC---
Confidence 3 10 126899999888878899999999996 999999974322 223333333 347788776543
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.++++.++++++++++++ +++++|+|+|+++|++.+.+++.. |+||.
T Consensus 282 ~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 282 TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 235788899999999875 367999999999999999998887 98873
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.2e-45 Score=347.61 Aligned_cols=335 Identities=28% Similarity=0.475 Sum_probs=284.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---C--------CCCCCcccccceeEEEEEe
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---P--------EGLFPCILGHEAAGIVESV 70 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~--------~~~~p~v~G~e~~G~V~~~ 70 (371)
|||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 89999998876 9999999999999999999999999999988665321 1 1136889999999999999
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc
Q 017431 71 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 150 (371)
Q Consensus 71 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 150 (371)
|++++.+++||+|++.+..+|++|.+|+.+..+.|..... .|.... .|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGG------------------GGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCC------------------CCceeeEEEechH
Confidence 9999999999999999999999999999999999975431 111101 2499999999999
Q ss_pred ceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 017431 151 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 151 ~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~ 230 (371)
.++++|+++++++++.+ .++.+||+++ ...++++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998776 5788999988 788899999999999999999999999999997899999999999999999
Q ss_pred CCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceE
Q 017431 231 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV 308 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 308 (371)
|++.++++++ .++.+.+++.+++ ++|+++|++|....++.++++++++ |+++.+|... ...+++...+. ++++
T Consensus 217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcE
Confidence 9999998877 6688888888887 7999999999877899999999996 9999999754 23444444433 4788
Q ss_pred EEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccH-HHHHHHHhCCCe--eEEEEe
Q 017431 309 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI-NEAFRYMHGGDC--LRCVLK 368 (371)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~A~~~~~~~~~--~kvvl~ 368 (371)
+.++... ..+++++++++++++++++.+.++++|+++|+ ++|++.+.+++. .|+||.
T Consensus 292 i~g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 292 LTGSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8887543 23689999999999999877788899999996 799999988775 498873
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8.2e-46 Score=349.08 Aligned_cols=339 Identities=22% Similarity=0.299 Sum_probs=277.2
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
+++++++.+++++++++++.|+|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd 89 (357)
T PLN02514 10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGD 89 (357)
T ss_pred EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCCC
Confidence 78999999999999999999999999999999999999999999988765556789999999999999999999999999
Q ss_pred EEeecCCC-CCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
+|++.+.. .|+.|.+|..+..+.|.........++ ..| ....|+|++|+.++.+.++++|++++
T Consensus 90 ~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~~ 154 (357)
T PLN02514 90 IVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKFVVKIPEGMA 154 (357)
T ss_pred EEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHHeEECCCCCC
Confidence 99866544 699999999999999986521100000 000 01125999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~ 239 (371)
+++|+.+++++.|||+++......++|++|+|+|+|++|++++|+|+++|+ +++++++++++.+ .++++|++.++++.
T Consensus 155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~ 233 (357)
T PLN02514 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS 233 (357)
T ss_pred HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence 999999999999999998766667899999999999999999999999999 6777777776654 44679998877654
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 318 (371)
+ . +.+.+.+. ++|++|||+|....++.++++++++ |+++.+|.... ..+++...+ .+++++.|+....
T Consensus 234 ~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 234 D--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVITGSFIGS-- 302 (357)
T ss_pred C--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEEEEEecCC--
Confidence 4 2 23444443 7999999999877899999999996 99999997632 234444433 3488888886643
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
..+++++++++++++++ +++ ++|+|+|+++|++.+.+++.. |+++.+++
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 24789999999999864 445 689999999999999998876 99998863
No 30
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.5e-46 Score=316.39 Aligned_cols=312 Identities=25% Similarity=0.312 Sum_probs=267.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
.|.+++++.|.+ +++++.|.|+|+++|++||-+++|+|..|....+|.+...++|.+||.|.+|+|+++|+.++++++
T Consensus 9 ~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 9 LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcccccc
Confidence 467888888866 999999999999999999999999999999999999977789999999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||||+... + +|.|++++.+|...++++|+.+
T Consensus 89 GDrVayl~-------------------------------~------------------~g~yaee~~vP~~kv~~vpe~i 119 (336)
T KOG1197|consen 89 GDRVAYLN-------------------------------P------------------FGAYAEEVTVPSVKVFKVPEAI 119 (336)
T ss_pred ccEEEEec-------------------------------c------------------chhhheeccccceeeccCCccc
Confidence 99997331 1 2499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++.+||++.+.++|||.-+++...+++|++||++.| |++|++++|++++.|+ .++++.+.++|.+.+++.|+.+.|++
T Consensus 120 ~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y 198 (336)
T KOG1197|consen 120 TLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDY 198 (336)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeec
Confidence 999999999999999999999999999999999955 9999999999999999 89999999999999999999999999
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEe-eecC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKG-TAFG 315 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g-~~~~ 315 (371)
+. +++.+.+.+.|++ |+|+++|++|. +++..++.+|++. |.+|.+|... +...+++...+. +.+++.. +.++
T Consensus 199 ~~--eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lvrpsl~g 273 (336)
T KOG1197|consen 199 ST--EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLVRPSLLG 273 (336)
T ss_pred cc--hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhccHhhhc
Confidence 88 8999999999999 99999999999 7799999999996 9999999853 222222222221 1333322 2222
Q ss_pred CCcccCc----HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 316 GFKSRSQ----VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 316 ~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
....+.+ ..+++.++.++.++.+ |.++|||+++.+|.++++++... |+++...
T Consensus 274 Yi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 274 YIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred ccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 2222223 3457777788887755 89999999999999999998887 9998764
No 31
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=8.2e-45 Score=343.50 Aligned_cols=361 Identities=36% Similarity=0.654 Sum_probs=291.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.++++++++++.+.|++.+++|+|||.++++|++|++...|.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08278 2 KTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKPG 80 (365)
T ss_pred ccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCC
Confidence 699999999887899999999999999999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccc-cccCCcce-eeccCCcceeeeEEecccceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSR-FSINGKPI-YHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~-~~~~~~~~-~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
|+|++.+. .|+.|..|+.+..+.|.........|.. ++|-.- ...+|.+. .++...|+|++|+.++.+.++++|++
T Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99998775 8999999999999999865432222211 111000 00000000 11234579999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++++.++++++||+.++.....++++++|||+|+|++|++++|+|+++|+++++++++++++.++++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999998888899999999999889999999999999999779999999999999999999999887
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 317 (371)
.+ .++.+.+.+.+++++|+++||+|++..+..++++++++ |+++.+|.........++...+ .++.++.++.....
T Consensus 239 ~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 239 KE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred CC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 66 56777777777339999999999877799999999996 9999998753222334444444 44777777665433
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
...+.++.+++++.++.+++.+. .+.|+++++++|++.+.+++..|++|+
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCceEEEEC
Confidence 23356788899999998854333 368999999999999998877798875
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-44 Score=339.87 Aligned_cols=342 Identities=24% Similarity=0.343 Sum_probs=282.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++++.|.|.+.++||+|||.++++|++|++.+.+.......|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 89999999986 89999999999999999999999999999998887765446688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCCC
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 159 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~~ 159 (371)
+|++.+..+|+.|..|..+..+.|.........+ ....|+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~-------------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFS-------------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCcccc-------------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 9999888899999999999999997542100000 0112499999999974 899999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++++.++..+.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|+++++++.
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999999999999985 778899999999998899999999999999997799999999999999999999999877
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc--hhe-eeceEEEeeecC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP--FQL-VTGRVWKGTAFG 315 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~--~~~-~~~~~~~g~~~~ 315 (371)
+ .++.+.+.+.+.+ ++|+++|++|++..+..++++++++ |+++.+|........+++. +.. ....++.+....
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 296 (351)
T cd08285 220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP 296 (351)
T ss_pred C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence 6 5677777777776 8999999999877899999999996 9999998754322233332 211 224445443221
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCC-ceeeeeecccHHHHHHHHhCCCe--eEEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDE-YVTHNMTLGEINEAFRYMHGGDC--LRCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~ 369 (371)
...+++++++++++++++++.. .+.++|+++++++|++.+++++. .|++|++
T Consensus 297 --~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 --GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred --CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 1236789999999999988743 34456999999999999988763 5999875
No 33
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=7.1e-44 Score=337.04 Aligned_cols=360 Identities=44% Similarity=0.788 Sum_probs=293.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++.+++++++|.|.+.+++|+|++.++++|+.|+..+.|.++ ..+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 89999999988899999999999999999999999999999998888765 34678899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|+..+..+|++|++|+.++.++|+......+ | ...++..++--.|...+...+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILG-G-QLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccccc-c-ccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 99999999999999999999999986532100 0 000000000000111111123469999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++++.+++++.+||.+++...++.++++|||+|+|.+|++++++|+.+|+++|+++++++++.++++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999999888899999999999988999999999999999955999999999999999999988888766
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 319 (371)
.++...+.+.+.+ ++|+++|++++...+..++++++++ |+++.+|.........++...+. .+..+.++.++....
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 5677778787766 8999999999767789999999996 99999986542233444444444 355666665544444
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEE
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 367 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl 367 (371)
.+.++.+++++.++.+++.+.+.++|+++++++|++.+.+++..|.||
T Consensus 315 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 315 RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 567889999999999886656788999999999999999888776655
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.4e-43 Score=330.51 Aligned_cols=334 Identities=22% Similarity=0.391 Sum_probs=276.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. ++++++|.|+|.+++|+||+.++++|++|++.+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 79999999875 99999999999999999999999999999999888765556789999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+..+|+.|.+|+.++++.|.+... .++. ++ |+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-RD------------------GGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEc-cC------------------CcceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999975432 1211 12 49999999999999999999998
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++++ +..++.++|+ +....++++|++|||+|+|++|++++|+|+. +|+..++++++++++.++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4567788885 5577899999999999999999999999996 69977888999999999999999999998765
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
..+.+.+.. .+ ++|++||++|++..+..++++++++ |+++.+|.... ...+....+. +++++.+...
T Consensus 216 --~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---- 284 (339)
T PRK10083 216 --EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL---- 284 (339)
T ss_pred --ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----
Confidence 455555533 23 6789999999877899999999996 99999987532 2222222222 3556655543
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-e-eEEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-C-LRCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~-~kvvl~~~d 371 (371)
..+.++.+++++.++++++.++++++|+++++++|++.+.++. . .|+++.+.+
T Consensus 285 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2357889999999999887656789999999999999998643 3 499998864
No 35
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3.6e-44 Score=335.84 Aligned_cols=319 Identities=17% Similarity=0.221 Sum_probs=248.3
Q ss_pred ceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC----CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
+++++.++++ +++++.|.|+ .++||+|||+++|||++|++.+.|.... ..+|.++|||++|+|+++|.+ .|+
T Consensus 4 ~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~ 79 (341)
T cd08237 4 QVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYK 79 (341)
T ss_pred cceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccC
Confidence 6788889887 9999999995 9999999999999999999999987532 257999999999999998874 799
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+..+|+ |+.|. ..+.|.+... .|.. .+ |+|+||+.+|++.++++|++
T Consensus 80 vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~vP~~ 134 (341)
T cd08237 80 VGTKVVMVPNTPVE-KDEII--PENYLPSSRF---RSSG-YD------------------GFMQDYVFLPPDRLVKLPDN 134 (341)
T ss_pred CCCEEEECCCCCch-hcccc--hhccCCCcce---eEec-CC------------------CceEEEEEEchHHeEECCCC
Confidence 99999998887777 44553 4466754321 1211 23 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhh--cCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++||.+ .+++++|+++.. ...+++|++|||+|+|++|++++|+++. +|+.+|++++++++|++++++.+....
T Consensus 135 l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~ 213 (341)
T cd08237 135 VDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL 213 (341)
T ss_pred CChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee
Confidence 999887755 488889988754 3456889999999999999999999986 666589999999999999987665432
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccC---CHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEE
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWK 310 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~ 310 (371)
++ + ...+ ++|++||++| .+.+++.++++++++ |+++.+|.... ..+++...+ .+++++.
T Consensus 214 ~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~ 277 (341)
T cd08237 214 ID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEY--PVPINTRMVLEKGLTLV 277 (341)
T ss_pred hh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCC--CcccCHHHHhhCceEEE
Confidence 21 1 1123 7999999999 456799999999997 99999997432 234444433 3588888
Q ss_pred eeecCCCcccCcHHHHHHHHHcC---CCCCCCceeeeeecc---cHHHHHHHHhCCCeeEEEEecC
Q 017431 311 GTAFGGFKSRSQVPWLVDKYMKK---EIKVDEYVTHNMTLG---EINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 311 g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~---~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
|+... ..++++.+++++.++ ..++.++++++|+++ ++++|++...++...|+||.++
T Consensus 278 g~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 278 GSSRS---TREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred Eeccc---CHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 87543 235789999999998 335778889999985 5566666555543459999875
No 36
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.3e-43 Score=329.80 Aligned_cols=340 Identities=29% Similarity=0.458 Sum_probs=284.2
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++.+++. +++.+.|.|.| .+++|+||+.++++|++|++.+.|.++..++|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 79999998877 99999999999 99999999999999999999998887656678999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++.+..+|+.|.+|+.+....|.......+.+. ...|+|++|++++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999976542211111 112499999999987 99999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++|+.++++++|||+++ ...+++++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999987 77889999999998889999999999999997578888888889999999999999888
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .++.+.+.+.+++ ++|++||++++...+..++++|+++ |+++.+|..............+.++.++.+.....
T Consensus 220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (347)
T cd05278 220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV- 295 (347)
T ss_pred Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence 76 5677778888776 8999999999866799999999996 99999986432211112222223466666544322
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe-e-EEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-L-RCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~-~-kvvl~ 368 (371)
.+.++.+++++.++.+++.+.+...|+++++++|++.+.+++. . |++++
T Consensus 296 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 296 --RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred --hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 3578889999999988765556788999999999999987776 4 88875
No 37
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.6e-43 Score=339.26 Aligned_cols=331 Identities=19% Similarity=0.248 Sum_probs=263.0
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccc-cCCCCC------CCCCcccccceeEEEEEeCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE------GLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~------~~~p~v~G~e~~G~V~~~G~~ 73 (371)
+||++++.+++. ++++++|.|+|.++||+|||.++|+|++|++.+ .|.... ..+|.++|||++|+|+++|++
T Consensus 2 ~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~ 80 (410)
T cd08238 2 KTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKK 80 (410)
T ss_pred CcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCC
Confidence 489999999986 999999999999999999999999999999976 454211 146889999999999999999
Q ss_pred CC-CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--
Q 017431 74 VT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-- 150 (371)
Q Consensus 74 v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-- 150 (371)
++ .|++||||++.+...|+.|..|.. +|.. .+| +|++|+.++.+
T Consensus 81 v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~-~~G------------------~~aey~~v~~~~~ 127 (410)
T cd08238 81 WQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYT-YPG------------------GLATYHIIPNEVM 127 (410)
T ss_pred ccCCCCCCCEEEEcCCcCCCCCCCCCC--------------cccc-CCC------------------cceEEEEecHHhc
Confidence 98 599999999999888998887731 1111 234 99999999987
Q ss_pred --ceEecCCCCCcchhhhc-cccc-hhhhhhh--------hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeEE
Q 017431 151 --SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRVI 215 (371)
Q Consensus 151 --~v~~lP~~~~~~~aa~~-~~~~-~ta~~~l--------~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g--~~~v~ 215 (371)
.++++|+++++++|+.+ +.+. .+++.++ .+..++++|++|+|+|+ |++|++++|+|+++| +.+|+
T Consensus 128 ~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi 207 (410)
T cd08238 128 EQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV 207 (410)
T ss_pred cCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence 68999999999998865 3111 1233332 24578899999999975 999999999999985 45799
Q ss_pred EEcCChhhHHHHHhc--------CCc-EEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEE
Q 017431 216 GIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 216 ~v~~~~~~~~~~~~~--------g~~-~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv 285 (371)
+++++++|+++++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..+..++++++++ |+++
T Consensus 208 ~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v 285 (410)
T cd08238 208 VTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLN 285 (410)
T ss_pred EEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEE
Confidence 999999999999997 665 4666543 14577778888887 9999999999888899999999996 8887
Q ss_pred EEccCCC-CCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee
Q 017431 286 IVGVAAS-GQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL 363 (371)
Q Consensus 286 ~~g~~~~-~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~ 363 (371)
.++.... ....+++...+. +++++.|+... ...++++++++++++++++.++++++|+|+++++|++.+..+...
T Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~g 362 (410)
T cd08238 286 FFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGG 362 (410)
T ss_pred EEEccCCCCccccccHHHhhhcCcEEEEeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCc
Confidence 7644221 112344444443 48888887643 235789999999999999888999999999999999999943334
Q ss_pred EEEEecC
Q 017431 364 RCVLKMQ 370 (371)
Q Consensus 364 kvvl~~~ 370 (371)
|+||.++
T Consensus 363 Kvvl~~~ 369 (410)
T cd08238 363 KKLIYTQ 369 (410)
T ss_pred eEEEECC
Confidence 9999874
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=3.6e-43 Score=328.48 Aligned_cols=330 Identities=27% Similarity=0.454 Sum_probs=278.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++.+++++++|.|++.+++|+|++.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 89999999976799999999999999999999999999999999888765445688999999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
+|++.+ ...|+.|.+|..+..+.|..... .|.. .+ |++++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence 998754 45799999999999999987653 2221 12 4999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+.+++.+++.+.+||+++.. .++.++++|||+|+|.+|++++++|+++|+ +|+++++++++.+.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998854 489999999999999999999999999999 7999999999999999999999988766
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 319 (371)
.++...+.+. +++|+++|++|....+..++++++++ |+++.+|... ...+++...+ .++.++.++....
T Consensus 217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---
Confidence 4566666655 37999999998667799999999996 9999998754 2344444433 3488888876432
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..++..+++++.++.++ +.+ +.|+++++++|++.+.+++.. |+|++
T Consensus 287 ~~~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ALDSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 24678888888887765 334 689999999999999998876 98874
No 39
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.1e-42 Score=327.39 Aligned_cols=336 Identities=26% Similarity=0.404 Sum_probs=279.0
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---------CCCCcccccceeEEEEEeCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---------GLFPCILGHEAAGIVESVGE 72 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~v~G~e~~G~V~~~G~ 72 (371)
|||+++.+++. +++++.|.|++.+++|+||+.++++|+.|++.+.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 79999999876 999999999999999999999999999999988875311 14677899999999999999
Q ss_pred CCC--CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc
Q 017431 73 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 150 (371)
Q Consensus 73 ~v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 150 (371)
+++ .+++||+|++.+..+|+.|..|..++.+.|.... .+|... ...|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence 999 8999999999999999999999999999996432 222210 012499999999988
Q ss_pred -ceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 151 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 151 -~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
.++++|+++++++|+.+ .+++++|+++ +..++++|++|||.|+|.+|++++++|+++|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7899999987 78899999999997779999999999999998778889999999999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceE
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 308 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~ 308 (371)
+|++.+++..+ ..+.+.+.+.+++ ++|+++|++|+...+..++++++++ |+++.+|.......+.+......++++
T Consensus 218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence 99988888765 5677788888877 8999999999766789999999996 999999865432222222111223566
Q ss_pred EEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 309 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+.++.... ..+.+++++++++.+++.++++++|+++++++|++.+++++.. |+++
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 66665432 3688899999999988655578999999999999999987765 8764
No 40
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.4e-42 Score=326.22 Aligned_cols=337 Identities=28% Similarity=0.424 Sum_probs=284.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. +++++.|.|+| .++||+|+++++++|+.|+..+.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 79999999887 99999999986 89999999999999999999998876655568899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++.+..+|++|.+|..+..+.|...... .|.. .+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence 9999999999999999999999999855321 1111 22 499999999987 89999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++..+++.+++.+++||.++....++.++++|||.|+|++|.+++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999987778889999999999889999999999999994488889899999999999999999988
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 316 (371)
.+ .++...+.+.+++ ++|+++||++....+..+++.++++ |+++.+|.... ...++... +.+++++.+....
T Consensus 219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeecCc-
Confidence 76 5566777777776 8999999999877789999999996 99999986432 23344433 3346777664322
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCC---CeeEEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG---DCLRCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~---~~~kvvl~~ 369 (371)
.+.+..++++++++.+++.++++++|+++++++|++.+.+. +..|++|++
T Consensus 293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 14578889999999988766678999999999999999876 345999874
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2e-42 Score=329.38 Aligned_cols=354 Identities=28% Similarity=0.397 Sum_probs=284.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. +++++.|.|.| .+++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 89999998865 99999999988 49999999999999999999999987655678899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCC-ccceecCCCccccccCCcceeecc--CCcceeeeEEeccc--ceEec
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGAT-GAGVMMNDRKSRFSINGKPIYHFM--GTSTFSQYTVVHDV--SVAKI 155 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~--~~g~~a~~~~v~~~--~v~~l 155 (371)
|+|++.+..+|+.|.+|..+..++|++..... ..+ ..|....++.| ..+.+ ..|+|++|++++.+ .++++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~g~~~~~~~v~~~~~~~~~l 154 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAK---LYGHAGAGIFG--YSHLTGGYAGGQAEYVRVPFADVGPFKI 154 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccccc---ccccccccccc--cccccCCCCCeeEEEEEcccccCeEEEC
Confidence 99999998899999999999999998754321 000 00000000000 00000 13699999999987 89999
Q ss_pred CCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 156 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
|+++++++|+.++..+++||+++ ...++.+|++|||+|+|.+|.+++++|+++|+.+|+++++++++.+++++++...+
T Consensus 155 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v 233 (386)
T cd08283 155 PDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET 233 (386)
T ss_pred CCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE
Confidence 99999999999999999999998 88899999999999889999999999999998669999999999999999844467
Q ss_pred ecCCCCCc-hHHHHHHhhcCC-CccEEEEccCC---------------------HHHHHHHHHHhccCCceEEEEccCCC
Q 017431 236 VNPKDHDK-PIQQVLVDLTDG-GVDYSFECIGN---------------------VSVMRAALECCHKGWGTSVIVGVAAS 292 (371)
Q Consensus 236 i~~~~~~~-~~~~~~~~~~~g-g~dvvid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~g~~~~ 292 (371)
+++.+ . ++.+.+.+.+++ ++|++||++|+ ...++.++++++++ |+++.+|....
T Consensus 234 i~~~~--~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~ 310 (386)
T cd08283 234 INFEE--VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGG 310 (386)
T ss_pred EcCCc--chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCC
Confidence 76655 4 477888888877 89999999975 24688999999996 99999987532
Q ss_pred CCcccccc-hheeeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-e-eEEEEec
Q 017431 293 GQEISTRP-FQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-C-LRCVLKM 369 (371)
Q Consensus 293 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~-~kvvl~~ 369 (371)
. ...++. ..+.++.++.+.... ..+.+..+++++.++++.+.++++++|+++++++|++.+.+++ . .|++|+.
T Consensus 311 ~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 311 T-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred C-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1 222333 223346677665422 2356888999999999887666778999999999999998876 3 4999863
No 42
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=3.7e-43 Score=324.46 Aligned_cols=302 Identities=22% Similarity=0.301 Sum_probs=239.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecC-ccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+||++++.+++. +++++.|.|+|.++||+|||++++|| ++|++.+.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 689999998876 99999999999999999999999996 7999988887643 2579999999999999999998 5
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||++. +..|..|.. | .+ |+|+||+.++++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence 9999999863 223322211 0 12 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++++. +.++ .+.|||+++.. . ..++++|||+|+|++|++++|+|+++|++.|++++.++++++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999754 5454 56899998754 2 34688999999999999999999999996677787777777766543 344
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
++.+ . .+.++|++|||+|++.+++.++++++++ |+++.+|..... .+++...+ .+++++.++...
T Consensus 192 ~~~~--~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~~~~~~ 257 (308)
T TIGR01202 192 DPEK--D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP--VNFDFVPAFMKEARLRIAAEW 257 (308)
T ss_pred Chhh--c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC--cccccchhhhcceEEEEeccc
Confidence 4322 1 1238999999999987899999999997 999999975432 33333332 346777776432
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe-eEEEEe
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-LRCVLK 368 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~-~kvvl~ 368 (371)
..++++.++++++++++++.++++++|+|+|+++|++.+.++.. .|++|+
T Consensus 258 ---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 258 ---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 23579999999999999988889999999999999998776544 599874
No 43
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.9e-42 Score=323.26 Aligned_cols=332 Identities=29% Similarity=0.435 Sum_probs=283.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.++++++++.+.+.|++++++|+|++.++++|++|+....|.++. ..+|.++|+|++|+|+++|++++.++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 799999999888999999999999999999999999999999988887642 35688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|+.|..|+.+..++|.+... .|+. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIG-TD------------------GGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCcc-CC------------------CcceeeEEecHHHeEECCCC
Confidence 99999999989999999999999999987664 2322 33 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| + +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999998766 46889999999999889999999999999 6 888888889999999999999998
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~ 314 (371)
++++ . +.+.+.+++++ ++|+++|++|+...++.++++++++ |+++.+|.... ..++... +.++.++.++..
T Consensus 218 ~~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 218 NASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred cCCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEec
Confidence 8776 4 77778888877 8999999999867799999999996 99999986532 2222222 334777776654
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. ..+.+..+++++.++.+++ ..+.|+++++++|++.+.+++.. |+++.+
T Consensus 291 ~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 291 G---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred c---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 3 2357888999999998764 34689999999999999988776 888753
No 44
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=9.7e-42 Score=322.99 Aligned_cols=360 Identities=32% Similarity=0.539 Sum_probs=290.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~---~~ 78 (371)
|||+++.+++.++++.+.|+|.+.++||+|++.++++|++|+..+.|.++. .+|.++|||++|+|+++|++++. ++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 799999999877999999999999999999999999999999988887654 57889999999999999999988 99
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccC-CcceeeccCCcceeeeEEecccceEecCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
+||+|++.+..+|+.|.+|+.+..++|.....+..++....+|+...... ++..+ ....|++++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCC
Confidence 99999998888999999999999999987652211110001111111100 00000 01236999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++.+++.++++++|||.++.....+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999888888899999999988999999999999999955998988999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
.++ .++...+.+..++ ++|+++|++++......++++++++ |+++.+|.........++...+ .++.++.++...
T Consensus 239 ~~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 239 AAK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred CCc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 876 5677778887766 8999999999964789999999996 9999998653222233333333 346666664321
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
...+.++.+++++.++.+++.+.+++.|+++++.+|++.+.+++.. |+||+
T Consensus 316 --~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 --RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred --CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1235688899999999988765678899999999999999988866 88874
No 45
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.1e-41 Score=320.74 Aligned_cols=336 Identities=27% Similarity=0.430 Sum_probs=281.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC------------CCCCCcccccceeEEEEE
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP------------EGLFPCILGHEAAGIVES 69 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~v~G~e~~G~V~~ 69 (371)
|||+++..++.+++++++|.|++.++||+|++.++++|++|++.+.|.++ ...+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 89999999988899999999999999999999999999999998887653 224577899999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc
Q 017431 70 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 149 (371)
Q Consensus 70 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 149 (371)
+|++++++++||+|++.+...|+.|..|+.+.+++|..... .|.. . .|++++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-Q------------------DGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-c------------------cCcceeeEEecH
Confidence 99999999999999999999999999999999999965421 1111 1 249999999999
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+.++++|+++++.+++.+++.+.|||+++.....+.++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998777777789999999889999999999999999788899899999999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEE
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVW 309 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 309 (371)
+|++.+++.++ ..+.+.+.+..++++|++||++|+...+..++++|+++ |+++.+|.............. .++.++
T Consensus 219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~i 294 (350)
T cd08240 219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLLP-LRALTI 294 (350)
T ss_pred hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHHh-hcCcEE
Confidence 99988887765 55666677766558999999999777899999999996 999999875432222222222 246677
Q ss_pred EeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 310 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.++.... .+++..++++++++.++.. ..+.|+++++++|++.+.+++.. |++++
T Consensus 295 ~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 295 QGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 7665432 2578889999999987643 56789999999999999887765 88875
No 46
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.3e-41 Score=317.92 Aligned_cols=339 Identities=27% Similarity=0.448 Sum_probs=285.0
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++.++++++.|.|.+.+++|+||+.++++|+.|+....|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 89999999888899999999999999999999999999999999888766556688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCCC
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 159 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~~ 159 (371)
+|+..+..+|++|.+|+.+..+.|+.... .|+. +.|+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-------------------HPGSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-------------------CCCcceeEEEcccccCceEECCCCC
Confidence 99988888999999999999999986431 1211 12499999999974 899999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++++.+++.+++||+++....++.++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++++++.+
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999998888889999999999999999999999999999 899998999999999999999898875
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCc-ccccchhe-eeceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQL-VTGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~ 317 (371)
+ ..++...+.++..+++|++|||+|+...+...+++++++ |+++.+|....... ..++...+ .++.++.++...
T Consensus 218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 4 134666676666558999999999767789999999996 99999987533221 23333333 346677766532
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+.++.++++++++.+.+.+.+.+.++++++++|++.+.+++.. |+|++
T Consensus 294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 235788899999999887655577899999999999999987776 87753
No 47
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=3.3e-41 Score=316.67 Aligned_cols=338 Identities=28% Similarity=0.417 Sum_probs=276.0
Q ss_pred cceEEeecCCCCeEEEEeeCCCCC-CCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++..++ .+++++.|+|.|. +++|+|++.++++|+.|++...|.++ ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 7899998875 4999999999985 99999999999999999998888765 3457889999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++.+..+|+.|.+|+.+....|.........+. ....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGS------------------PNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcccccccc------------------CCCCCceeEEEEcccccCceEECCCC
Confidence 999999989999999999999999975432100010 0112499999999865 99999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++|+.++++++|||+++. ...+.+|++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999885 47889999999998899999999999999975788888888999999999975 4555
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 316 (371)
+. .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|..... ........ +.++.++.+..
T Consensus 219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--- 291 (344)
T cd08284 219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR--- 291 (344)
T ss_pred CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---
Confidence 44 4577778888877 9999999999877899999999996 999999875321 22222222 23455555331
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
......++.+++++.++.+++.+++.++|+++++++|++.+.+++..|+|+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 1234678899999999998765557789999999999998887655788874
No 48
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.8e-41 Score=315.78 Aligned_cols=309 Identities=20% Similarity=0.226 Sum_probs=252.8
Q ss_pred cceEEeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 017431 2 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 2 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
|||+++.+++.| +++++.|.|.|.++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 799999998853 888899999999999999999999999999999887643 35788999999999999999999
Q ss_pred C-CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEe
Q 017431 76 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 154 (371)
Q Consensus 76 ~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 154 (371)
+ |++||+|+..+. .+ |+|++|+.++++.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence 6 999999985321 01 3999999999999999
Q ss_pred cCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 155 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 155 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~--Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
+|+++++++|+.+++.++|||.. ...... ++++++|+ |+|++|++++|+|+.+|+ +|+++++++++.++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999888899999854 455555 56666665 459999999999999999 79999999999999999999
Q ss_pred cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEE
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWK 310 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~ 310 (371)
++++++.+ .++.+.+++.+++ ++|++||++|+.. ....+++++++ |+++.+|.........++... +.+++++.
T Consensus 190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 99998876 6788888888887 9999999999854 67889999996 999999864322111132222 34478888
Q ss_pred eeecCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 311 GTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 311 g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
++....+.. .++++.++++++ +.+ .+.++++|+|+|+++|++.+.+++.. |++|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 877654421 245777888887 654 46688999999999999999987775 98874
No 49
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=9.5e-41 Score=318.99 Aligned_cols=337 Identities=21% Similarity=0.270 Sum_probs=272.1
Q ss_pred CcceEEeec--CCC---CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCCcccccceeE
Q 017431 1 MCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHEAAG 65 (371)
Q Consensus 1 ~~~a~~~~~--~~~---~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~v~G~e~~G 65 (371)
+|||+++.. ++. .++++++|.|+++++||+|++.++++|++|++...|... ....+.++|||++|
T Consensus 12 ~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G 91 (393)
T cd08246 12 KMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG 91 (393)
T ss_pred hhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence 589988863 332 388999999999999999999999999999988776511 11123578999999
Q ss_pred EEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeE
Q 017431 66 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 145 (371)
Q Consensus 66 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~ 145 (371)
+|+++|++++.+++||+|++.+...|+.|..|..+..++|..... +|+.-. .|+|++|+
T Consensus 92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a~y~ 150 (393)
T cd08246 92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFAQFA 150 (393)
T ss_pred EEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC------------------CCcceeEE
Confidence 999999999999999999999999999999999999999975432 232111 24999999
Q ss_pred EecccceEecCCCCCcchhhhccccchhhhhhhhhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 146 VVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 146 ~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+++...++++|+++++++++.+++++.|||+++... .+++++++|||+|+ |++|++++++|+++|+ ++++++++++
T Consensus 151 ~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~ 229 (393)
T cd08246 151 LVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEE 229 (393)
T ss_pred EechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHH
Confidence 999999999999999999999999999999988655 68899999999997 9999999999999999 7778888999
Q ss_pred hHHHHHhcCCcEEecCCCCC--------------------chHHHHHHhhcCC--CccEEEEccCCHHHHHHHHHHhccC
Q 017431 223 KFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECCHKG 280 (371)
Q Consensus 223 ~~~~~~~~g~~~vi~~~~~~--------------------~~~~~~~~~~~~g--g~dvvid~~g~~~~~~~~~~~l~~~ 280 (371)
+.++++++|++++++.++.+ ..+.+.+.+++++ ++|+++|++|+ ..+..++++++++
T Consensus 230 ~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~~ 308 (393)
T cd08246 230 KAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDRG 308 (393)
T ss_pred HHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhccC
Confidence 99999999999988864421 1355677777776 79999999998 5689999999996
Q ss_pred CceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhC
Q 017431 281 WGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 359 (371)
Q Consensus 281 ~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~ 359 (371)
|+++.+|.... ....+....+. ++.++.++.... .+++..+++++.++.+.+ .++++|+++++++|++.+.+
T Consensus 309 -G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~ 381 (393)
T cd08246 309 -GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHR 381 (393)
T ss_pred -CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHh
Confidence 99999986432 12223323222 366676665432 246888999999998763 46789999999999999988
Q ss_pred C-Cee-EEEE
Q 017431 360 G-DCL-RCVL 367 (371)
Q Consensus 360 ~-~~~-kvvl 367 (371)
+ +.. |+++
T Consensus 382 ~~~~~gkvvv 391 (393)
T cd08246 382 NQHHVGNMAV 391 (393)
T ss_pred CccccceEEE
Confidence 7 565 7765
No 50
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.6e-40 Score=315.27 Aligned_cols=343 Identities=29% Similarity=0.395 Sum_probs=273.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++.+++. ++++++|+|++ .++||+|||.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 78999988864 99999999996 799999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCC---ccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEec
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKI 155 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~l 155 (371)
|+|++.+..+|+.|..|+.+..+.|.+..... .+|+. . ..+ ..|+|++|+.++.+ .++++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~--~~g~~a~y~~v~~~~~~~~~l 143 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYV--D-----------MGP--YGGGQAEYLRVPYADFNLLKL 143 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCccccccccccc--c-----------cCC--CCCeeeeEEEeecccCcEEEC
Confidence 99999999999999999999999997643110 00100 0 000 02499999999976 89999
Q ss_pred CCCCCcc---hhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 156 DPQAPLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 156 P~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
|++++++ +++.++.++++||+++ ...++.+|++|||.|+|.+|++++|+|+++|+.+|+++++++++.++++++|+
T Consensus 144 P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 222 (375)
T cd08282 144 PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222 (375)
T ss_pred CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 9999998 5677888899999988 78899999999999889999999999999998678889999999999999998
Q ss_pred cEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH-----------HHHHHHHHhccCCceEEEEccCCCCC-------
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKGWGTSVIVGVAASGQ------- 294 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~~~------- 294 (371)
..+++.+ .++.+.+.+++++++|+++||+|+.. .+..++++++++ |+++.+|......
T Consensus 223 -~~v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 223 -IPIDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred -eEeccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 4566655 56777777776668999999999852 488999999996 9998887643211
Q ss_pred ----cccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 295 ----EISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 295 ----~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
...++...+. ++..+.+... ...+.++.+++++.++++++.++++++|+++++++|++.+.+++..|+|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 0112222222 2333433321 1235688899999999988655688999999999999999988833998863
No 51
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3e-40 Score=309.78 Aligned_cols=337 Identities=25% Similarity=0.392 Sum_probs=272.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.++++.+++.+.|.|.|.++||+||+.++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 7999999999889999999999999999999999999999998766532 1224677899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|+.|..|..+..++|.... +.+.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTK---GVGVN-RP------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcc---eeeec-CC------------------CcceeeEEechHHeEECcCC
Confidence 9999999999999999999999999996532 12221 22 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++.+++.+ ..+.+++.++.. ...+|++|+|.|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998888754 466666655433 34689999999889999999999999999668888888999999999999999988
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .++.+.+.+.+++ ++|++|||.|+...+..++++++++ |+++.+|.......+.+ ...+.++.++.++....
T Consensus 216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~- 290 (341)
T PRK05396 216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE- 290 (341)
T ss_pred cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC-
Confidence 76 5677888888876 9999999999877899999999996 99999987542222222 12223366777654221
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
..+.+..+++++.++ +++.+.+.++|+++++++|++.+.+++..|++++++
T Consensus 291 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 291 -MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred -ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 123456788888888 545555779999999999999998876449999874
No 52
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.4e-40 Score=310.93 Aligned_cols=334 Identities=28% Similarity=0.441 Sum_probs=276.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++.+++. +++.+.|+|+| .++||+||+.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 79999998876 99999999986 8999999999999999999988887653 357899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++....+|+.|.+|..+..+.|..... +|.. .+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999988875432 2211 334 99999999975 99999999
Q ss_pred CCcchhh-----hccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc
Q 017431 159 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233 (371)
Q Consensus 159 ~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~ 233 (371)
++++.+. ++...+.+||+++ ...++.+|++|+|.|+|.+|++++|+|+++|+++++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 2235688899887 477899999999988899999999999999996689998888899999999999
Q ss_pred EEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hheeeceEEEe
Q 017431 234 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKG 311 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~g 311 (371)
.++++.+ ..+.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.... ...++. ..+.++.++.+
T Consensus 216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence 9998876 5677788888877 9999999999877899999999996 99999986542 233333 23445777766
Q ss_pred eecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 312 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
.... ..+.+++++++++++.+++.++++++|+++++++|++.+.+++..|++|+
T Consensus 291 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 291 GPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred ecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 4321 23578889999999998866567799999999999999888776799986
No 53
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.2e-40 Score=310.66 Aligned_cols=324 Identities=23% Similarity=0.374 Sum_probs=262.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-----------CCCCCcccccceeEEEEEe
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 70 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~v~G~e~~G~V~~~ 70 (371)
|||+++..+ +++++++|.|++.+++|+|++.++++|+.|++...|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 799999877 699999999999999999999999999999998877321 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc
Q 017431 71 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 149 (371)
Q Consensus 71 G~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 149 (371)
|+++++ +++||+|++.+...|+.|..|..+... . .+ |+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~-~~------------------g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------E-AP------------------GGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------C-CC------------------CceeeeEEech
Confidence 999987 999999999999999999999432110 0 12 39999999999
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+.++++|+++++++++ ++.++++||+++ ...++++|++|||+|+|.+|.+++|+|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999998877 667888999984 78899999999999889999999999999999778888889999999999
Q ss_pred cCCcEEecCCCCCc--hHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eee
Q 017431 230 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVT 305 (371)
Q Consensus 230 ~g~~~vi~~~~~~~--~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~ 305 (371)
+|+++++++++.+. .+. .+.+...+ ++|+++|++|+...+..++++++++ |+++.+|....... +.+.. +.+
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~ 280 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRK 280 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhc
Confidence 99988888765211 232 34445555 8999999999855688999999996 99999987532221 22222 234
Q ss_pred ceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 306 GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+.++.++... ..+++..++++++++.+++.+++.++|+++++++|++.+.+++.. |+|++
T Consensus 281 ~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 281 ELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 5565544321 224788899999999988766678999999999999999988776 88874
No 54
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=3.4e-40 Score=312.07 Aligned_cols=336 Identities=25% Similarity=0.398 Sum_probs=267.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|+++++..+.. +++++.+.|++.++||+||+.++++|++|++.+.+... ...+|.++|||++|+|+++|++++.|+
T Consensus 18 ~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
T PLN02702 18 NMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLV 96 (364)
T ss_pred cceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCC
Confidence 56677777755 99999999999999999999999999999998876321 113577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|++|..|+.+..+.|..... ++.... .|+|++|+.++.+.++++|++
T Consensus 97 ~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~------------------~g~~~~y~~v~~~~~~~~P~~ 155 (364)
T PLN02702 97 VGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPV------------------HGSLANQVVHPADLCFKLPEN 155 (364)
T ss_pred CCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCC------------------CCcccceEEcchHHeEECCCC
Confidence 99999999999999999999999999975321 111101 249999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++|+.. .++.++|+++ ...++.+|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|+++++++
T Consensus 156 l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 233 (364)
T PLN02702 156 VSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV 233 (364)
T ss_pred CCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEec
Confidence 999988752 2445577776 77889999999999999999999999999999778889889999999999999888765
Q ss_pred CCCCchHHHHHHhh---cCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~---~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~ 314 (371)
.....++.+.+.++ +++++|++||++|+...+..++++++++ |+++.+|.... ...+....+ .+++++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 234 STNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred CcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEecc
Confidence 43224565555544 2338999999999777899999999996 99999986432 122222222 33677777653
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeec--ccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTL--GEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
. ...+..+++++.++.+++.+.++++|++ +++++|++.+.+++.. |++|.
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 2467889999999998766667788666 7999999998887665 99885
No 55
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=4.5e-40 Score=308.14 Aligned_cols=333 Identities=30% Similarity=0.514 Sum_probs=277.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++.++|.|.+.+++|+|+|.++++|+.|+....|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 79999998875 99999999999999999999999999999999888765555688899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|+..+..+|+.|..|+.++.+.|..-.. .++ ...|+|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGV-------------------HRDGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eee-------------------cCCCcceeEEEechh-eEECCCCCCH
Confidence 99998889999999999999999953221 111 112499999999999 9999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++|+.+ ..++++++++ ...++.+|++|||+|+|.+|.+++|+|+.+|+ +|+++.+++++.++++++|+++++++.+
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999877 5778888876 77899999999999889999999999999999 7899988899999999999999998876
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 319 (371)
..+.+.+.+.+++ ++|+++|++|+...+..++++|+++ |+++.+|..... ..++...+. +++++.+.. ...
T Consensus 213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~---~~~ 285 (337)
T cd08261 213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSR---NAT 285 (337)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEec---cCC
Confidence 5677888888877 8999999998877789999999996 999999865322 222222222 255555542 123
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-ee-EEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-CL-RCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~~-kvvl~~ 369 (371)
.+.++.+++++.++.+++.+.+..+|+++++++|++.+.+++ .. |+|+++
T Consensus 286 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 357888999999999886434678999999999999998873 54 999864
No 56
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=3.7e-40 Score=306.38 Aligned_cols=316 Identities=26% Similarity=0.393 Sum_probs=261.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++++.|.|++++++|+||+.++++|++|+....|..+ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 79999998764 99999999999999999999999999999998888654 5778999999999999997 67999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|...+..+|+.|.+|+.+.++.|..... .+....+ |+|++|++++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD------------------GAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC------------------CceEEEEEechHHeEECcCCCCH
Confidence 99999999999999999999988886442 2211123 39999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++++.+ ..+.++|.+ .+..+++++++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|++.++++.+
T Consensus 133 ~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~- 208 (319)
T cd08242 133 EQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA- 208 (319)
T ss_pred HHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc-
Confidence 888764 345566654 477889999999999989999999999999999 6999999999999999999988776643
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 319 (371)
. +++ ++|+++||+|+...+..+++++.++ |+++..+.... ...++...+ .++.++.+....
T Consensus 209 -~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~---- 271 (319)
T cd08242 209 -E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG---- 271 (319)
T ss_pred -c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc----
Confidence 1 334 8999999999877789999999996 99998765432 223333332 346777766432
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
.++.+++++.++++++.+.+++.|+++++++|++.+.++...|++|+
T Consensus 272 --~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 272 --PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred --cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 37889999999998766678899999999999999987765699886
No 57
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=5.8e-40 Score=308.10 Aligned_cols=335 Identities=30% Similarity=0.473 Sum_probs=277.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
||++++.+++. +.+++.+.|++.+++|+|++.++++|+.|+..+.|.+.....|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 79999999876 99999999999999999999999999999999888764334577899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccc-----eEecC
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID 156 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----v~~lP 156 (371)
+|++.++.+|++|.+|..++.+.|..... .|.. ..|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNL-------------------YDGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---eccC-------------------CCCcceeeEEecccccccccEEECC
Confidence 99999999999999999999888875432 1111 124999999999998 99999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
+++++.+|+.+ .++.+||+++. ..++++|++|||+|+|.+|++++|+|+.+|++.|+++++++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999999876 68889999885 45899999999998899999999999999994488888999999988999998888
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (371)
++++ .++.+.+.+.+++ ++|+++||+++...+..++++++++ |+++.+|.........++...+. ++..+.+...
T Consensus 216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 8876 6677788888777 8999999999866789999999996 99999986433222222222222 3556655443
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
. ..+.++.+++++.++.+.+.+.+..+|+++++++|++.+.+++ . |+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 293 A---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 2 2356888999999998875445678899999999999999888 6 88863
No 58
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=6.7e-40 Score=306.80 Aligned_cols=333 Identities=31% Similarity=0.474 Sum_probs=280.5
Q ss_pred cceEEeecCCCC-eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~-~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||++++..++++ +.+.+.|.|.+.+++|+|++.++++|+.|+....|.++ ...+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999998 68888899999999999999999999999999888765 2356788999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.+..+|+.|.+|+.++.++|..... .|+. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999965432 1222 23 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++.+++.++.++.+||+++.....++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++++++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998888889999999999889999999999999999 799999999999999999998888766
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (371)
+ ..+.+.+ +.+.+ ++|+++||+|....++.++++|+++ |+++.+|.... ...++...+. ++.++.++...
T Consensus 218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 289 (338)
T cd08254 218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG-- 289 (338)
T ss_pred C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC--
Confidence 5 4455555 55555 8999999999877899999999996 99999986432 2223323333 36666665432
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
....+..+++++.++.+++. .+.+++++++++++.+.+++.. |+|+++
T Consensus 290 -~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 -TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 23578889999999988754 5789999999999999988876 998864
No 59
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=7.3e-40 Score=313.16 Aligned_cols=340 Identities=21% Similarity=0.306 Sum_probs=274.8
Q ss_pred CcceEEeec--CCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCC-ccccccee
Q 017431 1 MCKAAVAWE--PNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILGHEAA 64 (371)
Q Consensus 1 ~~~a~~~~~--~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~v~G~e~~ 64 (371)
+|||+++.. +++| +++.++|.|.+.+++|+|++.++++|++|++...+... ....| .++|||++
T Consensus 7 ~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~ 86 (398)
T TIGR01751 7 TMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS 86 (398)
T ss_pred hhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence 599999965 5654 99999999999999999999999999999877655321 11123 37999999
Q ss_pred EEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeee
Q 017431 65 GIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQY 144 (371)
Q Consensus 65 G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 144 (371)
|+|+++|++++.+++||+|++.+...|++|.+|+.+....|..... +|.. .+.|+|++|
T Consensus 87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~------------------~~~g~~ae~ 145 (398)
T TIGR01751 87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYE------------------TNFGSFAEF 145 (398)
T ss_pred EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---cccc------------------CCCccceEE
Confidence 9999999999999999999999999999999999999999964431 2211 112499999
Q ss_pred EEecccceEecCCCCCcchhhhccccchhhhhhhhh--cCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 145 TVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 145 ~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+.++.+.++++|+++++++++.+.+.+.+||+++.. ..++.+|++|||+|+ |.+|++++++|+++|+ +++++++++
T Consensus 146 ~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~ 224 (398)
T TIGR01751 146 ALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSP 224 (398)
T ss_pred EEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCH
Confidence 999999999999999999999999999999998755 577899999999998 9999999999999999 677777888
Q ss_pred hhHHHHHhcCCcEEecCCCCC--------------------chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccC
Q 017431 222 KKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 280 (371)
Q Consensus 222 ~~~~~~~~~g~~~vi~~~~~~--------------------~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~ 280 (371)
++.+.++++|++.++++++.+ ..+.+.+.+++++ ++|++|||+|+ ..+..++++++++
T Consensus 225 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~ 303 (398)
T TIGR01751 225 EKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG 303 (398)
T ss_pred HHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC
Confidence 899999999999999865421 1355667778877 89999999997 5689999999996
Q ss_pred CceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhC
Q 017431 281 WGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 359 (371)
Q Consensus 281 ~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~ 359 (371)
|+++.+|.... ...+++...+ ..+.++.++.+... .+++.+++++.++.+.. .++++++++++++|++.+.+
T Consensus 304 -G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~ 376 (398)
T TIGR01751 304 -GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHR 376 (398)
T ss_pred -CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHc
Confidence 99999987532 1123332222 23556666544322 35778999999988763 46799999999999999988
Q ss_pred CCee-EEEEecC
Q 017431 360 GDCL-RCVLKMQ 370 (371)
Q Consensus 360 ~~~~-kvvl~~~ 370 (371)
++.. |+|+++.
T Consensus 377 ~~~~gkvvv~~~ 388 (398)
T TIGR01751 377 NHHQGNVAVLVL 388 (398)
T ss_pred CCCCceEEEEeC
Confidence 8776 9998874
No 60
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.1e-39 Score=310.53 Aligned_cols=337 Identities=25% Similarity=0.373 Sum_probs=269.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC------C-CCCCCcccccceeEEEEEeCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
+.+.++.. . +++++++|.|++.+++|+|++.++++|++|++.+.+.. + ..++|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 34444443 2 49999999999999999999999999999998876321 1 13467899999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEe
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 154 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 154 (371)
+.|++||+|++.+..+|+.|..|..+..+.|..... .|+. .+ |+|++|+.++.+.+++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~v~v~~~~~~~ 164 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-AD------------------GAFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CC------------------CcceeeEEechHHeEE
Confidence 999999999999999999999999999999986442 2322 23 3999999999999999
Q ss_pred cCCCCC------cchhhhccccchhhhhhhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 155 IDPQAP------LDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 155 lP~~~~------~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
+|++++ ..++++++.++++||+++... .++++|++|||+|+|++|++++++|+.+|+.+|+++++++++.+++
T Consensus 165 lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~ 244 (384)
T cd08265 165 INELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA 244 (384)
T ss_pred CCccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 998642 233666777889999998666 6899999999998899999999999999997799999989999999
Q ss_pred HhcCCcEEecCCCC-CchHHHHHHhhcCC-CccEEEEccCCH-HHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-
Q 017431 228 KNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL- 303 (371)
Q Consensus 228 ~~~g~~~vi~~~~~-~~~~~~~~~~~~~g-g~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~- 303 (371)
+++|+++++++++. ..++.+.+.+++++ ++|+++|++|++ ..+..++++++++ |+++.+|.... ..++....+
T Consensus 245 ~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 321 (384)
T cd08265 245 KEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVLQ 321 (384)
T ss_pred HHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHHh
Confidence 99999998887642 12677788888887 999999999973 4689999999996 99999986432 223222222
Q ss_pred eeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEE
Q 017431 304 VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 367 (371)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl 367 (371)
.+..++.+.... .....+.++++++.++.+++.+++++.|+++++++|++.+.++...|+|+
T Consensus 322 ~~~~~l~~~~~~--~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 322 VRRAQIVGAQGH--SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hCceEEEEeecc--CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 225566665421 12246889999999999876656778999999999999977665457775
No 61
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.5e-40 Score=306.62 Aligned_cols=329 Identities=25% Similarity=0.397 Sum_probs=274.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.++++++++++.|.|.+.+++|+|++.++++|++|+....|.++..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 79999999998899999999999999999999999999999998888776556788999999999999999998999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+..+|+.|.+|..+..+.|..... +|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEE-LD------------------GFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccc-cC------------------ceeeeeeecchhceEECCCCCCH
Confidence 99999888999999999999999976542 2221 23 39999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
.+++.+++.+.+||+++... .+.++++|||+|+ |.+|++++++|+.+|+ +++++++++++.+.++++ ++++++..
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999988665 8999999999988 9999999999999999 788888989999988888 66666543
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCc--ccccchheeeceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPFQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~ 318 (371)
.+.+.+.+. +++|+++||+|+. .+..++++++++ |+++.+|....... ..+... +.++.++.+... .
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~ 283 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGTP-TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---A 283 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCChH-HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---C
Confidence 344555554 3799999999984 589999999996 99999987533221 222222 344677776532 2
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+++++.+++++.++.++ +.+.+.|+++++++|++.+.+++.. |+++..
T Consensus 284 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 TKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 346788999999999875 3467899999999999999887665 988864
No 62
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.9e-39 Score=304.63 Aligned_cols=331 Identities=31% Similarity=0.481 Sum_probs=267.9
Q ss_pred eEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-CCC--CCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 4 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPE--GLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 4 a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|+++.++.. +++++.|.|.+.+++|+|+|.++++|+.|++.+.+. .+. ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467778854 999999999999999999999999999998876422 211 1357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|++|+.+.++.|...... +.... .|+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPV------------------DGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccC------------------CCceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999643210 00001 24999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+ .++.+||+++ ....+++|++|||.|+|.+|++++|+|+.+|+++|+++++++++.++++++|+++++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 5788899886 8899999999999988999999999999999955899989999999999999999988766
Q ss_pred CCch---HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecC
Q 017431 241 HDKP---IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 315 (371)
Q Consensus 241 ~~~~---~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 315 (371)
.. +.+.+.+.+++ ++|+++||+|+...+...+++++++ |+++.+|..... ..++... ..++..+.++...
T Consensus 217 --~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd05285 217 --EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY 291 (343)
T ss_pred --ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC
Confidence 34 36677777777 8999999999865789999999996 999999864322 1222112 2235555554322
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEE
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVL 367 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl 367 (371)
.+.++.+++++.++.+.+.+.+.++|+++++.+|++.+.+++. +|++|
T Consensus 292 ----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 ----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred ----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2568889999999987655556789999999999999988753 59987
No 63
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=2.2e-39 Score=303.52 Aligned_cols=332 Identities=26% Similarity=0.418 Sum_probs=270.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.++++...+++.|.|++.++||+|||.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 899999998885449999999999999999999999999999988886543 2467899999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
+|++.+ ..+|+.|.+|..+..+.|..... .|.. ++ |+|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-cc------------------CcceeEEEEchHHeEeCCCCCC
Confidence 998755 45699999999999999986542 2222 23 3999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+.+++.+++.+.|||+++ ...++++|++|||+|+|++|++++++|+. +|+ +|+++++++++.+.++++|++.++++.
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999987 77889999999999999999999999998 499 899999999999999999998888864
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
. ..++.+.+++.++ ++|+++.+.++...+..++++++.+ |+++.+|.... ..+++...+. ++.++.++...
T Consensus 216 ~-~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--- 287 (338)
T PRK09422 216 R-VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG--- 287 (338)
T ss_pred c-cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC---
Confidence 3 1345666776665 6895555555557799999999996 99999986432 2233322222 35566655432
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..++++.+++++.++.++. .+ +.++++++++|++.+.+++.. |+++.+
T Consensus 288 ~~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 288 TRQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred CHHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEec
Confidence 2357888999999998753 34 468999999999999988776 988865
No 64
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.1e-39 Score=303.74 Aligned_cols=309 Identities=22% Similarity=0.294 Sum_probs=258.1
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
|||+++.+++.| ++++++|.|.+.++||+|+|.++++|+.|++.+.|.++ ...+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 799999988764 88999999999999999999999999999999988765 23568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|++.+ .+ |+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAP-------------------------------VH------------------GTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEecc-------------------------------CC------------------CcceeEEEEchHHeEECCC
Confidence 9999998542 12 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++++++.+++.+.+||+++ ...++++|++|||+|+ |.+|++++|+|+++|+ +++++.+++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999998999999986 5588999999999987 9999999999999999 788888888888888889998888
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~ 314 (371)
++.+ .++.+.+.+.+++ ++|++|||+|+. ....++++++++ |+++.+|... ....+++... +.++.++.++..
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQ--PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCC--chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence 8766 6778888898888 999999999994 588999999996 9999998742 2233333322 234777777765
Q ss_pred CCCc-------ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFK-------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+. ....+..+++++.++.+++. +.++|+++++++|++.+.++... |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 4321 12357788999999988753 46889999999999999876665 88864
No 65
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.5e-39 Score=304.49 Aligned_cols=334 Identities=28% Similarity=0.401 Sum_probs=274.0
Q ss_pred ceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
|+++.+.++..+++++++.|++.++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57888888888999999999999999999999999999999999887755567889999999999999999999999999
Q ss_pred Ee-ecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 83 VI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 83 V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
|+ ......|++|.+|..+..+.|...... +.|.. .-.....|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVT-YNGKY--------------PDGTITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhc-ccccc--------------cCCCcCCCcceeEEEechhheEECCCCCCH
Confidence 97 445568999999999999999764421 00100 000122359999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++++.+++.+.+||+++.. .++++|++|+|.|+|.+|++++++|+.+|+ +++.+++++++.++++++|++.+++...
T Consensus 146 ~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 9999999999999998744 468999999998889999999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCCCccc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~ 320 (371)
.++.. . .++++|+++||++.......++++++++ |+++.+|...... .++... +.++.++.++.... .
T Consensus 223 -~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 223 -PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred -hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence 22221 1 2348999999999865689999999996 9999998753221 344444 33588888876643 3
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
++++.+++++.++++++ . .+.|+++++++||+.+.+++.. |+|++
T Consensus 292 ~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 292 KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 57888999999998754 3 4789999999999999998876 98874
No 66
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.9e-39 Score=302.50 Aligned_cols=336 Identities=29% Similarity=0.465 Sum_probs=275.1
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++++.|+|++.++||+|++.++++|+.|+....+.+. ...|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 79999999876 99999999999999999999999999999988877652 24578899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|+..+...|+.|.+|..+..+.|+.... .|.. . .|+|++|++++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSR-R------------------DGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---Eecc-c------------------CCcccceEEechHHeEECcCCCCH
Confidence 99999888999999999999999986532 2211 2 249999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++|+.+ ..+++||+++. ...+.++++|||+|+|.+|.+++|+|+++|+++|+++++++++.++++++|++.++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999887 57889999885 778999999999988999999999999999955999988888899999999988888766
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch--heeeceEEEeeecCCC-
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF--QLVTGRVWKGTAFGGF- 317 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~- 317 (371)
.. ...+.+..++ ++|+++||+|+...+..++++|+++ |+++.+|.......+..... .+.++.++.++.+...
T Consensus 214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 34 5666677776 8999999998877789999999996 99999986542211221111 1234667776654321
Q ss_pred -cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhC-CCee-EEEE
Q 017431 318 -KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG-GDCL-RCVL 367 (371)
Q Consensus 318 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~-~~~~-kvvl 367 (371)
...+.++.+++++.++.+.+.+.+.+.+++++++++++.+.+ +... |+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 113567888999999987644446789999999999999998 5555 8764
No 67
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.6e-39 Score=301.77 Aligned_cols=336 Identities=30% Similarity=0.453 Sum_probs=270.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++..++..+++.+.|.|.|.+++++||+.++++|+.|+..+.+.. .....|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 7999999888779999999999999999999999999999988755432 1224567899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+..+|+.|..|..+.++.|.... ..|.. +.|+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVD-------------------TDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEecc-------------------CCCcceEEEEechHHcEECcCC
Confidence 9999999999999999999999999996432 22211 2349999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++ +++++.++.++++++. ....+|++|||.|+|.+|++++|+|+.+|+.+|+++++++++.++++++|++++++.
T Consensus 139 ~~~~-~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPE-IASIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHH-HhhhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 9984 4456667888887764 455789999999889999999999999998678888888899999999999888877
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .++. .+.+.+++ ++|++|||+|+......++++|+++ |+++.+|.........+....+.++..+.+....
T Consensus 216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (341)
T cd05281 216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR-- 289 (341)
T ss_pred cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--
Confidence 65 4566 67777776 9999999999877789999999996 9999998643222222222123345666655421
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
...+.+..+++++.++.+.+.+.+.+.++++++++|++.+.+++..|+|++
T Consensus 290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~ 340 (341)
T cd05281 290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY 340 (341)
T ss_pred CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence 122467789999999998766667788999999999999998883399876
No 68
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=9.3e-39 Score=299.69 Aligned_cols=334 Identities=31% Similarity=0.497 Sum_probs=278.3
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
|||+++.+++ ..+++++.+.|.+.+++|+||+.++++|++|+..+.|.++. ...|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 8999999887 34999999999999999999999999999999988887643 245668999999999999999999999
Q ss_pred CCEEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 80 GDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 80 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
||+|++.+ ..+|+.|.+|..+..+.|..... .|+. . .|++++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-V------------------DGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-c------------------CCcceeEEEeccccEEECCCC
Confidence 99998776 56799999999999999965432 1211 1 249999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998755 58999999999988 6799999999999999 8999999999999999999999988
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
+++ .++.+.+.+.+++ ++|+++|+.++...+..++++++++ |+++.+|... ....+++...+ .++.++.+....
T Consensus 217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccC
Confidence 776 5677788888876 8999999888778899999999996 9999998643 22224443332 236666664432
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..++++.+++++.++.+++ .+ +.|+++++++|++.+.++... |++++|
T Consensus 293 ---~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 ---TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 1357888999999998754 33 679999999999999988776 999875
No 69
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=6.9e-39 Score=300.34 Aligned_cols=331 Identities=27% Similarity=0.405 Sum_probs=263.5
Q ss_pred EeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCcccccccc-CCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 6 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
++++.+. +++++.|+|.+.+++|+||+.++++|++|+..+. |..+. ...|.++|+|++|+|+++|++++.|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4556655 9999999999999999999999999999987763 33321 135778999999999999999999999999
Q ss_pred EeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcc
Q 017431 83 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 162 (371)
Q Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~ 162 (371)
|++.+..+|+.|.+|..|+++.|..... ++...++ ....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999987532 1110000 0012499999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCC
Q 017431 163 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 242 (371)
Q Consensus 163 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~ 242 (371)
+|+. ..++++||+++.....+ ++++|||.|+|.+|++++|+|+.+|+++++++++++++.++++++|+++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 8876 56888999988666666 9999999988999999999999999877899988898889999999988888765
Q ss_pred chHHHHHHhhc-CC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCCCcc
Q 017431 243 KPIQQVLVDLT-DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 243 ~~~~~~~~~~~-~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 319 (371)
..+ .+.. .. ++|+++|+.++...++..+++|+++ |+++.+|.... ....+... +.++.++.+... .
T Consensus 220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~ 288 (339)
T cd08232 220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG--PVPLPLNALVAKELDLRGSFR----F 288 (339)
T ss_pred hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccCcHHHHhhcceEEEEEec----C
Confidence 222 2222 22 6999999999766789999999996 99999986431 22222222 234666666542 2
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+.++.+++++.++.+++.+.+.++|+++++++|++.+.+++.. |+|+++
T Consensus 289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 289 DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 24688899999999887666678999999999999999877665 999864
No 70
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1e-38 Score=298.06 Aligned_cols=329 Identities=34% Similarity=0.545 Sum_probs=271.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++..+++++.+++.|.|.+.+++|+|+++++++|+.|++...|..+....|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 79999988666799999999999999999999999999999999988776556788999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+...|+.|.+|..+..+.|.+.. .+|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEE-VD------------------GGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccc-cC------------------CeeeeEEEechhheEECCCCCCH
Confidence 9999999999999999999999997642 23321 23 49999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++++.+++++.+||+++.. ..+.++++|||+|+ |.+|++++++++..|+ +|+++.+++++.+.+++++.+.+++..+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999999866 88999999999987 9999999999999999 7888888888888888899877775432
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch-heeeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~ 319 (371)
+.+.+.+.. ++|++++++|... ...++++++++ |+++.+|....... .+... ...++..+.++.. ..
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPA-PLRPGLLILKEIRIIGSIS---AT 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCCc-CCCHHHHHhCCcEEEEecC---CC
Confidence 445555543 7999999999854 88999999996 99999987532211 11111 1123455555431 22
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+++.+++++.++.+++ .++++|+++++++|++.+.+++.. |++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 356888999999988653 467899999999999999988776 88864
No 71
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=5.4e-40 Score=299.43 Aligned_cols=269 Identities=26% Similarity=0.404 Sum_probs=220.2
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcc
Q 017431 58 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 131 (371)
Q Consensus 58 v~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~ 131 (371)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|.+|+.++++.|.+.... |....++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC----------
Confidence 589999999999999999 899999999999999999999999999999865431 2110000
Q ss_pred eeeccCCcceeeeEEeccc-ceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 017431 132 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 210 (371)
Q Consensus 132 ~~~~~~~g~~a~~~~v~~~-~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g 210 (371)
.....|+|+||+.++++ .++++|+++++++|+.+++.+.|+|+++. .....+|++|||+|+|++|++++|+|+++|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012499999999997 79999999999999999999999999874 455669999999999999999999999999
Q ss_pred CCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 211 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 211 ~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+++|++++++++|.++++++|++.+++..+ ..+.+.+.+++ ++|++||++|++..++.++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966999999999999999999998887643 24556677776 8999999999988899999999997 99999997
Q ss_pred CCCCCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcC--CCCCCCceeeeeecccH
Q 017431 290 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEI 350 (371)
Q Consensus 290 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~ 350 (371)
.......++++..+. +++++.|+... ..++++++++++.++ ++++.++++++|+|+|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 533334455555544 48889887543 235799999999874 67777889999999874
No 72
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.1e-39 Score=300.27 Aligned_cols=299 Identities=20% Similarity=0.281 Sum_probs=240.4
Q ss_pred eEEEE---eeCC-CCCCCeEEEEEeeeecCccccccccCCCCCCCCCccccc--ceeEEEEEeCCCCCCCCCCCEEeecC
Q 017431 14 LVIED---VQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAGIVESVGEGVTEVQPGDHVIPCY 87 (371)
Q Consensus 14 ~~~~~---~~~~-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~--e~~G~V~~~G~~v~~~~~Gd~V~~~~ 87 (371)
|++.+ ++.| ++.++|||||+.++++|+.|...+.+.......|.++|+ |++|+|..+|++++.|++||+|+..
T Consensus 27 f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~- 105 (348)
T PLN03154 27 MEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI- 105 (348)
T ss_pred EEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec-
Confidence 88887 4666 358999999999999999987644332222235889998 8899999999999999999999631
Q ss_pred CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccc--eEe--cCCCCCcc-
Q 017431 88 QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAK--IDPQAPLD- 162 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--v~~--lP~~~~~~- 162 (371)
++|++|+.++.+. +++ +|++++++
T Consensus 106 ---------------------------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~ 134 (348)
T PLN03154 106 ---------------------------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSY 134 (348)
T ss_pred ---------------------------------------------------CCcEEEEEEeccccceEEccCcCCCCHHH
Confidence 2899999998753 544 59999986
Q ss_pred hhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCC
Q 017431 163 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKD 240 (371)
Q Consensus 163 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~ 240 (371)
+||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.++++ ++|+++++++.+
T Consensus 135 ~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~ 213 (348)
T PLN03154 135 HLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE 213 (348)
T ss_pred HHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC
Confidence 688899999999999988889999999999988 9999999999999999 7999999999999887 799999998764
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-----ccchhe-eeceEEEeeec
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-----TRPFQL-VTGRVWKGTAF 314 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-----~~~~~~-~~~~~~~g~~~ 314 (371)
. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|..... ..+ ++...+ .+++++.|+..
T Consensus 214 ~-~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~k~~~i~g~~~ 289 (348)
T PLN03154 214 E-PDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLN-SLSASQGIHNLYNLISKRIRMQGFLQ 289 (348)
T ss_pred c-ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccC-CCCCCCCcccHHHHhhccceEEEEEH
Confidence 1 356677777776689999999998 5799999999996 999999875321 111 122222 34778888765
Q ss_pred CCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 315 GGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 315 ~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
..+. ..+.+++++++++++++++ .+.++|+|+++++|++.+++++.. |+||++.+
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 290 SDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 4321 1245778999999999874 366789999999999999998887 99998853
No 73
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.9e-38 Score=297.47 Aligned_cols=334 Identities=26% Similarity=0.393 Sum_probs=269.1
Q ss_pred EeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 6 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
..+++++++++++.|.|.|.++||+||+.++++|+.|+..+.+.. ...++|.++|+|++|+|+++|++++.+++||+
T Consensus 3 ~~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 82 (340)
T TIGR00692 3 MKTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY 82 (340)
T ss_pred ccccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence 346788889999999999999999999999999999998765542 11245778999999999999999999999999
Q ss_pred EeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcc
Q 017431 83 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 162 (371)
Q Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~ 162 (371)
|++.+...|+.|..|..+..+.|...+. +|.. . .|+|++|++++.+.++++|++++.+
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~ 140 (340)
T TIGR00692 83 VSVETHIVCGKCYACRRGQYHVCQNTKI---FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPE 140 (340)
T ss_pred EEECCcCCCCCChhhhCcChhhCcCcce---Eeec-C------------------CCcceeEEEeehHHcEECcCCCChH
Confidence 9999999999999999999999987532 2211 1 2499999999999999999999985
Q ss_pred hhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCC
Q 017431 163 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 242 (371)
Q Consensus 163 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~ 242 (371)
+| +++.++.+|++++ .....+|++|+|.|+|.+|.+++|+|+.+|++.|+++++++++.++++++|++.+++..+
T Consensus 141 ~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~-- 215 (340)
T TIGR00692 141 YA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK-- 215 (340)
T ss_pred hh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--
Confidence 54 5677888898876 345779999999888999999999999999955888888888999999999988888766
Q ss_pred chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcccC
Q 017431 243 KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRS 321 (371)
Q Consensus 243 ~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (371)
.++.+.+.+.+++ ++|+++||+++...+...+++|+++ |+++.+|.......+++....+.++.++.+... ....+
T Consensus 216 ~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 292 (340)
T TIGR00692 216 EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFE 292 (340)
T ss_pred cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchh
Confidence 5677788888776 8999999999877789999999996 999999875322122222112223556655441 11224
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 322 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.+..++++++++++++.+.+.+.+++++++++++.+.+++..|+|+.+
T Consensus 293 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 293 TWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred hHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 577889999999987655578999999999999999877645998864
No 74
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3e-38 Score=295.37 Aligned_cols=330 Identities=30% Similarity=0.483 Sum_probs=271.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++.+.|.|++.+++|+||+.++++|+.|+....|..+.. +|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~-~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC-CCcccccceEEEEEEeCCCCCCCCCCC
Confidence 79999998885 9999999999999999999999999999999988876543 788999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+...|+.|.+|..+..+.|..... .|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-CC------------------CcceeEEEecHHHcEECcCCCCH
Confidence 99999988999999998888877765431 1111 12 49999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
.+|+.+ ..+.++++++ ...++++|++|||+|+|.+|.+++++|+++|+++|+++++++++.+.++++|++.+++..+
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998776 6788999887 7889999999999988999999999999999955888989999999999999988887765
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 319 (371)
..+... +.+.+ ++|+++|+++....+...+++++++ |+++.+|........++....+. ++.++.+....
T Consensus 214 -~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 285 (334)
T cd08234 214 -EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN---- 285 (334)
T ss_pred -CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----
Confidence 333333 34444 8999999998777799999999996 99999987543233444444333 35566655432
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
...++.+++++.++.+++.+.++++|+++++++|++.+.+ +.. |+|+
T Consensus 286 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 2468889999999988766656789999999999999988 554 8876
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=3.7e-38 Score=294.99 Aligned_cols=335 Identities=26% Similarity=0.393 Sum_probs=276.4
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++...+.+ +++.+.+.|++.+++|+|++.++++|++|++.+.|.... ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 799999854433 888888888899999999999999999999988886542 24678899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|+.|.+|..+.++.|..... .|.. .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-VD------------------GGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccc-cC------------------cceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999986431 2221 22 48999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++++.+||+++.+..++.++++|+|+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999999999999888889999999999988 7999999999999999 7888888888888888888877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hheeeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~ 315 (371)
..+ .++.+.+.+.+.+ ++|++++++|. ..+...+++++++ |+++.+|..... ...... ..+.++.++.+....
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRK--EDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCC--hHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence 654 5666677777766 89999999998 4589999999996 999999865332 222332 123346677666543
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. ...+..+++++.++.+++ .+++.|+++++++|++.+.+++.. |++++.
T Consensus 293 ~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 293 T---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred C---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2 246888899998888653 467899999999999999887766 888763
No 76
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.6e-38 Score=297.14 Aligned_cols=299 Identities=19% Similarity=0.255 Sum_probs=231.5
Q ss_pred eEEEEeeCCCCC-CCeEEEEEeeeecCcccccccc---CCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 017431 14 LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWS---GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 89 (371)
Q Consensus 14 ~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~---g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 89 (371)
+++.+.|.|+|. ++||+|||+++|||+.|..... +.....++|.++|||++|+|+++|++++.|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 899999999874 9999999999999998854332 2111224678999999999999999999999999997320
Q ss_pred CCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcch----hh
Q 017431 90 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC 165 (371)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~----aa 165 (371)
++|++|++++.+.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 1799999999999999999865443 45
Q ss_pred hccccchhhhhhhhhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEecCCCC
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 241 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~~~~~ 241 (371)
+++.++.|||+++.+..++++| ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|+++++++.+
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 6777899999998888888877 99999988 9999999999999998679999999999888876 99999998876
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC-Cccc----ccc--hhee--eceEEEee
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEIS----TRP--FQLV--TGRVWKGT 312 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~----~~~--~~~~--~~~~~~g~ 312 (371)
.++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... .... +.. ..+. .+.+...+
T Consensus 211 -~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (345)
T cd08293 211 -DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF 287 (345)
T ss_pred -CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence 66778888877668999999999954 79999999996 999999853210 1011 110 0111 13333332
Q ss_pred ecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 313 AFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 313 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
....+. ..+.++++++++.++.+++. ....++++++++|++.+.+++.. |+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 288 LVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 221111 11346678889999998754 34567999999999999988776 999875
No 77
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.2e-38 Score=271.69 Aligned_cols=312 Identities=22% Similarity=0.306 Sum_probs=252.5
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
.|+++|.+.|+| +++++.++|.....+|+||..|+.||++|+..++|.++-. ++|++-|+|++|+|+.+|+++++|
T Consensus 20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf 99 (354)
T KOG0025|consen 20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF 99 (354)
T ss_pred cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence 589999999999 8899999998888889999999999999999999999766 789999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+.... +.|+|++|.+.+++.++++++
T Consensus 100 k~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~Li~vd~ 131 (354)
T KOG0025|consen 100 KPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDLIKVDK 131 (354)
T ss_pred CCCCeEeecCC------------------------------------------------CCccceeeEeecccceEEcCC
Confidence 99999986532 245999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCC
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGV 232 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~----~~~~~~g~ 232 (371)
.++++.||.+..+.+|||..|.+...+.+|++|+-.|| +++|++.+|+|+++|++.+-++ |+.... +.++.+|+
T Consensus 132 ~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA 210 (354)
T KOG0025|consen 132 DIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGA 210 (354)
T ss_pred cCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999888888 9999999999999999555555 554333 34466999
Q ss_pred cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEE
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWK 310 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~ 310 (371)
++++...+.... ...+..... .+.+.|||+|+.. .....+.|.+| |+++.+|.. +..+++.+...++ +.++++
T Consensus 211 ~~ViTeeel~~~--~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lIFKdl~~r 285 (354)
T KOG0025|consen 211 TEVITEEELRDR--KMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLIFKDLKLR 285 (354)
T ss_pred ceEecHHHhcch--hhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchheeccceee
Confidence 999965442111 111111223 7999999999965 77888889997 999999884 5566666655554 599999
Q ss_pred eeecCCCcccC--------cHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEEec
Q 017431 311 GTAFGGFKSRS--------QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKM 369 (371)
Q Consensus 311 g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~ 369 (371)
|+++..|...+ .+.++.+++.+|++.... ....+|++...|++...+.-. .|-++.+
T Consensus 286 GfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 286 GFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred eeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 99998885432 355688899999987543 355689999888886554332 2555544
No 78
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.4e-38 Score=296.85 Aligned_cols=323 Identities=25% Similarity=0.288 Sum_probs=257.8
Q ss_pred cceEEeecCCCC--eEEEE-eeCCCCCCCeEEEEEeeeecCccccccccCCCC--------------------CCCCCcc
Q 017431 2 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI 58 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~-~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~v 58 (371)
||++++..++.+ +++.+ .+.|++.+++|+|||.++++|++|++...|.++ ..++|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 789999887754 66654 577788999999999999999999998877543 2357889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCC
Q 017431 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 138 (371)
Q Consensus 59 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 138 (371)
+|||++|+|+++|+++++|++||+|++.+..+|+.|..|.. |.. +|.. .+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~-~~------------------ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSE-RD------------------ 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCC-CC------------------
Confidence 99999999999999999999999999988888888765432 110 1110 12
Q ss_pred cceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017431 139 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 217 (371)
Q Consensus 139 g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v 217 (371)
|++++|+.++.+.++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 3999999999999999999999999999999999999987 7788999999999998 9999999999999999 67777
Q ss_pred cCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 017431 218 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 296 (371)
Q Consensus 218 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~ 296 (371)
++++ +.+.++++|++.+++..+ ..+.+ .+.+++ ++|++||++|+ ..++.++++++++ |+++.+|... ....
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIA-GPVV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccC-Cccc
Confidence 7665 788889999976655433 33333 455566 89999999998 5689999999996 9999998642 2223
Q ss_pred cccchh-eeeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 297 STRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 297 ~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.++... +.++.++.++.... ...+..+++++.+++++. .+.++|+++++++|++.+.+++.. |+++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 444444 33477777776532 357888999999998753 467889999999999999887766 888763
No 79
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3.1e-38 Score=294.20 Aligned_cols=320 Identities=28% Similarity=0.369 Sum_probs=258.1
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++..++ +.+++.+.+.|+++++||+|++.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 7899998776 45899999988899999999999999999999887652 222457789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+...|+.|.+|+.+..+.|..... +|+. . .|+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-S------------------NGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eecc-C------------------CCceeeEEEcCHHHceeCCCCCC
Confidence 999999999999999999999999986432 2221 2 24999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+++++.+++++.+||+++.. .++++|++|+|+|+ |++|++++++|+++|+ +|+++++ .+.++++|++++++..
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence 99999999999999998855 88999999999998 9999999999999999 6777752 3667889998888764
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 318 (371)
+ ..+.+.+++ +++|++++++|+ ..+..++++++++ |+++.+|... .....++...+.. +.++.+...+
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~--- 280 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGG--- 280 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCC---
Confidence 3 245566666 689999999998 5699999999996 9999998642 1223333333332 5566665433
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EE
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RC 365 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kv 365 (371)
.+++++.+++++...+ ..+.++|+++++++|++.+.+++.. |+
T Consensus 281 ~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 281 TRKELLELVKIAKDLK----VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred CHHHHHHHHHHHHcCC----ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 2357888888885332 2356889999999999998876654 54
No 80
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.9e-38 Score=297.23 Aligned_cols=309 Identities=23% Similarity=0.285 Sum_probs=243.6
Q ss_pred ceEEeecCCC-CeEEEEeeC----CCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccce--eEEEEEeCCCC
Q 017431 3 KAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESVGEGV 74 (371)
Q Consensus 3 ~a~~~~~~~~-~~~~~~~~~----~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~--~G~V~~~G~~v 74 (371)
|++....+.. .|++++.++ |+|+++||||||++++||+.|++.+.|.... ...|.++|+++ .|++..+|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v 88 (338)
T cd08295 9 KAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGN 88 (338)
T ss_pred ecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCC
Confidence 4444433332 399999988 7899999999999999999999988885433 24678889755 45666678888
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc-cceE
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSVA 153 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v~ 153 (371)
+.|++||+|+.. |+|+||++++. ..++
T Consensus 89 ~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~~~ 116 (338)
T cd08295 89 PDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQDLR 116 (338)
T ss_pred CCCCCCCEEEec----------------------------------------------------CCceeEEEecchhcee
Confidence 899999999621 28999999999 7999
Q ss_pred ecC-CCCCcc-hhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-
Q 017431 154 KID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN- 229 (371)
Q Consensus 154 ~lP-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~- 229 (371)
++| +++++. +++.++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++++
T Consensus 117 ~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~ 195 (338)
T cd08295 117 KIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNK 195 (338)
T ss_pred ecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh
Confidence 995 678876 789999999999999988899999999999988 9999999999999999 79999899999999988
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcc----cccchh-ee
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQ-LV 304 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~~~-~~ 304 (371)
+|+++++++.+ ..++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|........ ..+... +.
T Consensus 196 lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 272 (338)
T cd08295 196 LGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIY 272 (338)
T ss_pred cCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhh
Confidence 99999998654 1356677777765599999999998 6699999999996 999999864321110 011122 23
Q ss_pred eceEEEeeecCCCcc--cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 305 TGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 305 ~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
++.++.++....+.. .+.++.+++++.++++++. +...|+++++++|++.+++++.. |+|+++
T Consensus 273 ~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 273 KRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred ccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 366777655433221 2346778999999998754 44669999999999999988776 999874
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=4.1e-38 Score=293.75 Aligned_cols=304 Identities=20% Similarity=0.228 Sum_probs=242.8
Q ss_pred CcceEEeecC--CCC----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017431 1 MCKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 1 ~~~a~~~~~~--~~~----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
+||++++.+. +.+ +++++.|.|+|+++||+|||+++++|+.|.....+ ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 6999999983 333 89999999999999999999999999887542211 124688999999999995 44
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc---c
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S 151 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~ 151 (371)
+.|++||||+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999732 178999999999 9
Q ss_pred eEecCCCCC--c---chhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 152 VAKIDPQAP--L---DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 152 v~~lP~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
++++|++++ . ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999998 2 2334678899999999988899999999999986 9999999999999999 7999999999999
Q ss_pred HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCC--cc---cccc
Q 017431 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ--EI---STRP 300 (371)
Q Consensus 226 ~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~--~~---~~~~ 300 (371)
+++++|+++++++.+ .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... .. ....
T Consensus 183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 999999999998876 677777877776689999999998 6689999999996 9999998532111 01 1111
Q ss_pred h-heeeceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 301 F-QLVTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 301 ~-~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. .+.+++++.++....+. ..+.++.+++++.++.+++. ...+|+++++++|++.+.+++.. |+++++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 1 22346777776543321 12246678899999998765 33568999999999999988776 999864
No 82
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.1e-37 Score=289.00 Aligned_cols=323 Identities=27% Similarity=0.378 Sum_probs=265.5
Q ss_pred cceEEeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~----~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||++++.++++ ++++.+.+.|.+.++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 79999998884 58899999888999999999999999999999988877655678899999999999999999999
Q ss_pred CCCCEEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 78 QPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 78 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
++||+|++.+ ..+|++|.+|..+.++.|..... .|+. . .|+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-V------------------DGGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-c------------------CCceEEEEEecchhEEECC
Confidence 9999997654 46789999999999999975542 2221 1 2499999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
+++++.+++.+++++.+||+++ ...+++++++|||+|+|++|+++++++++.|+ +|+++++++++.+.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999988 88999999999999999999999999999999 899998999999999999998877
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCC
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 316 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (371)
+.... ..+++|+++++.+....++.++++++++ |+++.+|.... ....++...+..+..+.++...
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~- 282 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANL- 282 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCC-
Confidence 66441 1237999999877767899999999996 99998875321 1111222222235555554322
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
....+..+++++.++.+++ ..++|+++++++|++.+.+++.. |+++
T Consensus 283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2246788889998988764 35889999999999999987776 7763
No 83
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=6.8e-38 Score=291.90 Aligned_cols=291 Identities=20% Similarity=0.250 Sum_probs=233.2
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCC
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRE 93 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~ 93 (371)
+++.+.|.|+|+++||+|||+++++|+.|.. |.......|.++|.|++|+|++.|+ .|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8999999999999999999999999996543 3333233578999999999999874 59999999732
Q ss_pred CccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec----CCCCCcchh-hhcc
Q 017431 94 CKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLLG 168 (371)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l----P~~~~~~~a-a~~~ 168 (371)
++|++|+.++.+.+.++ |+++++++| ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 16889999999888877 999999987 6789
Q ss_pred ccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHH
Q 017431 169 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 247 (371)
Q Consensus 169 ~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 247 (371)
++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+. ..+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHH
Confidence 999999999888999999999999986 9999999999999999 89999999999999999999999987651 24555
Q ss_pred HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC---Ccccc--cchh-eeeceEEEeeecCCCc---
Q 017431 248 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---QEIST--RPFQ-LVTGRVWKGTAFGGFK--- 318 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---~~~~~--~~~~-~~~~~~~~g~~~~~~~--- 318 (371)
.+...+++++|++||++|++ .+..++++++++ |+++.+|..... ...+. .... +.+++++.++....+.
T Consensus 199 ~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 56565545899999999985 579999999996 999999864311 11111 1122 2236677766543321
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+.++.+++++.++++++. +..+|+++++++|++.+++++.. |+|++
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 12357789999999998765 45678999999999999988776 88864
No 84
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.5e-37 Score=289.75 Aligned_cols=314 Identities=23% Similarity=0.270 Sum_probs=254.6
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||++++.+++.+ +++++++.|++.++||+|++.++++|++|++...|.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 7999999998875 99999999999999999999999999999999888776555788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999973210 1 138999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++++++.+++.+.+||.++.....+++|++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999998899999998888888999999999976 9999999999999999 7888889999999999999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-------ceEE
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-------GRVW 309 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-------~~~~ 309 (371)
..+ .++.+.+++.+++ ++|+++||+++ ......+++++++ |+++.+|..... ...+....+.. ...+
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T PRK10754 192 YRE--ENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_pred CCC--CcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEeccee
Confidence 765 5677788888887 99999999998 5588899999996 999999865321 11111111111 1111
Q ss_pred EeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 310 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.+...........+..+++++.++.+++..+..+.|+++++++|++.+.+++.. |+|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 111100000011245678899999987655557899999999999999887776 99986
No 85
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.4e-37 Score=288.77 Aligned_cols=327 Identities=31% Similarity=0.478 Sum_probs=267.9
Q ss_pred ceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
||+++.+++..+++++.|.|.+.+++|+|++.++++|++|+..+.|......+|.++|||++|+|+++|++++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899999767999999999999999999999999999999998887654567889999999999999999999999999
Q ss_pred EeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 83 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 83 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
|++.+. .+|+.|.+|..++.+.|.+... .++. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYT-TQ------------------GGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccc---cCcc-cC------------------CccccEEEEcHHHeEECCCCCCH
Confidence 987664 5799999999999999987543 1210 12 49999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
.+++.+++.+.+||.++.. .++.++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999999999999998855 789999999999988899999999999999 8999999999999999999888877654
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCccc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSR 320 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~ 320 (371)
...... ..+++|++++++++......++++++++ |+++.++..... ...+....+. ++.++.++.... .
T Consensus 216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence 222221 2247999999988777899999999996 999999864322 2222222232 355666665432 2
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
..++.+++++.++.+.+ ..+.|+++++++|++.+.+++.. |+|+
T Consensus 286 ~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 286 ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 46788889998888764 34789999999999999888776 7664
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=3.5e-37 Score=288.95 Aligned_cols=314 Identities=24% Similarity=0.315 Sum_probs=253.6
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCCC-CeEEEEEeeeecCccccccccCCCCCC-C----CCcccccceeEEEEEeCC
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE 72 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~v~G~e~~G~V~~~G~ 72 (371)
|||+++.+++.+ +.+++.|.|+|.+ ++|+||+.++++|+.|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999999876 8999999998887 999999999999999999888876432 2 577899999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccce
Q 017431 73 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 152 (371)
Q Consensus 73 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 152 (371)
++..+++||+|++... . .|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------~------------------~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------G------------------LGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------C------------------CccchheEeccHHHe
Confidence 9999999999985421 1 139999999999999
Q ss_pred EecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHH
Q 017431 153 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA 227 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~----~~~~~~ 227 (371)
+++|+++++++++.+++.+.|||+++.....+++|++|||+|+ |.+|++++|+|++.|+ +++++.+++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999887788999999999987 9999999999999999 677766655 667888
Q ss_pred HhcCCcEEecCCCC-CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eee
Q 017431 228 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVT 305 (371)
Q Consensus 228 ~~~g~~~vi~~~~~-~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~ 305 (371)
+++|+++++++.+. ...+...+..++++++|+++||+|+.. ...++++++++ |+++.+|..... ...++... +.+
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 268 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFK 268 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhC
Confidence 89999999887651 015666677766558999999999954 77899999996 999999864322 22333322 344
Q ss_pred ceEEEeeecCCCcc-------cCcHHHHHHHHHcCCCCCCCceeeee---ecccHHHHHHHHhCCCee-EEEEec
Q 017431 306 GRVWKGTAFGGFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 306 ~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+.++.++....+.. ...+..+++++.++.+.+. ...++ +++++++|++.+.+++.. |+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 77777776543211 1246778888888887654 34556 999999999999887776 999875
No 87
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=9e-37 Score=281.81 Aligned_cols=300 Identities=28% Similarity=0.467 Sum_probs=249.7
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||+++..+++ +++++++++.|.+.+++|+|+|.++++|++|.+...|.......|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 7899998766 349999999999999999999999999999999888876444567889999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|+|++.+. .+|+.|.+|..+....|.... ++|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRK---GIGTQ-------------------ADGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCc---eeeec-------------------CCCceEEEEEcchHHeEECcCCC
Confidence 99998774 679999999999998887532 12211 12499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHhcCCcEEec
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v--~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++|+ ++..+++||+++....+++++++|||.|+|.+|.+++++|+.+|+ +|+++ ++++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 677888999999888999999999998889999999999999999 67666 334567888899999877 7
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+.. .++.+.+.+.+++ ++|+++|++|+...+...+++|+++ |+++.+|... .....++...++ +++++.|+.++
T Consensus 216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence 655 6677788887776 8999999998767799999999996 9999998854 223444444443 58999998875
Q ss_pred CCcccCcHHHHHHHHHcC
Q 017431 316 GFKSRSQVPWLVDKYMKK 333 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ 333 (371)
. +++++++++++++|
T Consensus 292 ~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 292 T---PASWETALRLLASG 306 (306)
T ss_pred c---hHhHHHHHHHHhcC
Confidence 4 46899999998764
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=7.7e-37 Score=286.04 Aligned_cols=308 Identities=18% Similarity=0.242 Sum_probs=244.0
Q ss_pred ceEEeecC---CCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 017431 3 KAAVAWEP---NKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 3 ~a~~~~~~---~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||+++.++ +++ +++.++|.|+|+++||+|||+++++|+.|...+.|..+...+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57888886 544 8888999999999999999999999999998888876555678899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+.... .. .. |+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~---------------------------~~-~~------------------g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD---------------------------ID-RP------------------GSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC---------------------------CC-CC------------------CcccceEEEcHHHcccCCC
Confidence 99999974310 00 12 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~ 230 (371)
++++++++.+++++.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999888888877 999999987 99999999999998 99 899998989999999999
Q ss_pred CCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEE
Q 017431 231 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVW 309 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~ 309 (371)
|+++++++.. ++...+.+..++++|+++|++++...+...+++++++ |+++.++.. ..++ ...+. ++.++
T Consensus 194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~--~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELD--ISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---cccc--chhhhhcceEE
Confidence 9999887543 4666666654348999999987667799999999996 999988532 1122 22222 12333
Q ss_pred EeeecC--CCcc-------cCcHHHHHHHHHcCCCCCCCceeeee---ecccHHHHHHHHhCCCee-EEEEe
Q 017431 310 KGTAFG--GFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 310 ~g~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.+..+. .... ...++.+++++.++.+++. +.+.+ +++++++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 332221 0000 1346778899999987643 33444 468999999999988776 88774
No 89
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.7e-36 Score=280.74 Aligned_cols=312 Identities=23% Similarity=0.265 Sum_probs=254.9
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
|||+++.+++.+ +++.+.+.|.+.+++|+|++.++++|+.|+....|..+. ..+|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 799999887654 777788877789999999999999999999888776432 346788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||+|++... ..+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~-----------------------------~~~------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG-----------------------------RAG------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC-----------------------------CCC------------------ceeeEEEEEchHHeEeCC
Confidence 999999985421 012 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++++++.+++.+.||| ++....+++++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 4667889999999999986 9999999999999999 79999999999999999999888
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeee
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTA 313 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~ 313 (371)
++..+ .++.+.+.+.+++ ++|+++|++|+.. ...++++++.+ |+++.+|...... ..++... +.++.++.++.
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence 87765 5677778887777 8999999999865 79999999996 9999998753222 2333222 33467777665
Q ss_pred cCCCc---ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 314 FGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 314 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..... ..+.+...++++.++.+.. .+.+.|+++++++|++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 53321 1235667888888888753 467899999999999999988776 998864
No 90
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.2e-36 Score=279.13 Aligned_cols=330 Identities=25% Similarity=0.387 Sum_probs=266.8
Q ss_pred cceEEeecCC--CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~--~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++...+ +.+++.+.+.|.+.+++++|++.++++|++|++...|.++.. ..|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 8999999775 338888988888999999999999999999999888765433 4678899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.....|+.+.+|..+.+.. .|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEASA---------LGGP-ID------------------GVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccccccccccccc---------cccc-cC------------------ceeeeEEEecHHHeEECCCC
Confidence 99999988776666554332222111 1111 22 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++.+++.+++.+.+||+++.....+++|++|+|+|+|++|++++++|+++|+ +|+++++++++.+.++++|.+.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998888899999999999889999999999999999 79999999999999999999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 316 (371)
.. ..++...+.+.+++ ++|+++|++++ ..+..++++++++ |+++.+|...... ....... +.++.++.++....
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RT-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFE-APVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred Cc-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCc-cCcCHHHHhhcceEEEEEecCc
Confidence 54 14567778888887 99999999986 5689999999996 9999998754321 1222222 34478888876543
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
...++++++++.++.+.. ..++.|++++++++++.+.+++.. |+++++
T Consensus 288 ---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 ---RAQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred ---HHHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 347888889998877653 356889999999999999887776 888753
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.6e-36 Score=281.01 Aligned_cols=313 Identities=22% Similarity=0.282 Sum_probs=254.2
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||||+++.+++.. +++.+.+.|++.+++|+|||.++++|+.|+....|..+. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 8999999998863 778888888899999999999999999999888876532 2456789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+... .+ |+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------PG------------------GGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------CC------------------CceeeEEEecHHHcEeCCC
Confidence 9999997431 12 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++.+++.+++++.+||+++.....+++|++|||+|+ |.+|++++++|+++|+ +++.+.+++++.+.++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999888889999999999987 9999999999999999 666788889999999999998888
Q ss_pred cCCCCCch-HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-ccchheee-ceEEEee
Q 017431 237 NPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGT 312 (371)
Q Consensus 237 ~~~~~~~~-~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~~~~-~~~~~g~ 312 (371)
+... .+ +...+.+.+++ ++|+++|++++ ..+..++++++++ |+++.+|.... ..+. ++...+.. ..++.++
T Consensus 191 ~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (334)
T PTZ00354 191 RYPD--EEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFS 265 (334)
T ss_pred ecCC--hhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEee
Confidence 7755 33 67778888776 99999999987 6689999999996 99999986432 2222 33333222 4466666
Q ss_pred ecCCCccc-------CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 313 AFGGFKSR-------SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 313 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
........ ..++.+++++.++.+++ .+.+.+++++++++++.+.+++.. |+++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 266 TLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred eccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 54331110 12356778888888664 367889999999999999887665 9998765
No 92
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=4e-36 Score=281.53 Aligned_cols=315 Identities=24% Similarity=0.307 Sum_probs=248.1
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++..++ +.++++++|.|+++++||+|++.++++|++|+....+.. ...+|.++|||++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 8999999995 338999999999999999999999999999998876654 22357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|+......|+ + .. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~------------~--------~~---~~------------------g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP------------N--------DP---RN------------------GAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC------------C--------CC---CC------------------CcccceEEechhheEECCCCCC
Confidence 999876432221 0 00 22 3999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+++++.+++.+.+||+++.+..++ .++++|||+|+ |.+|++++++|+++|+ +|+.+. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999998766554 78999999998 8999999999999999 777776 5688888899
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhcc--CCceEEEEccCCCCCcccccchheeece
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK--GWGTSVIVGVAASGQEISTRPFQLVTGR 307 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 307 (371)
+|++++++..+ .++.+.+++.+++++|+++|++|++..+..+++++++ + |+++.+|...... .+. ... ...
T Consensus 197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~~-~~~-~~~ 269 (339)
T cd08249 197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EPR-KGV-KVK 269 (339)
T ss_pred cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cCC-CCc-eEE
Confidence 99999988766 6677778777766899999999986679999999999 8 9999998753221 111 111 111
Q ss_pred EEEeeecC------CCcccCcHHHHHHHHHcCCCCCCCceeeeee--cccHHHHHHHHhCCC-ee-EEEEec
Q 017431 308 VWKGTAFG------GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMT--LGEINEAFRYMHGGD-CL-RCVLKM 369 (371)
Q Consensus 308 ~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~A~~~~~~~~-~~-kvvl~~ 369 (371)
.+....+. .......+..+++++.++.+.+.+ ..+++ ++++++|++.+.+++ .. |+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 270 FVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 11112111 111123466788899899887653 35566 999999999999888 65 999875
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.9e-36 Score=281.29 Aligned_cols=311 Identities=23% Similarity=0.285 Sum_probs=252.8
Q ss_pred CcceEEeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 017431 1 MCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 1 ~~~a~~~~~~~~----~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
+|||+++.+++. ++++++.+.|.+.++||+|||.++++|+.|+....|.++. ..+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 599999998876 4999999999999999999999999999999988887643 35788999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
.+++||+|++.. . |+|++|++++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------~------------------g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------F------------------GAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------C------------------cceeEEEEechHHeEEC
Confidence 999999998531 1 39999999999999999
Q ss_pred CCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 156 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
|++ ..+++.++.++.+||+++.+..++++|++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677888999999999888889999999999986 9999999999999999 7888888889899999999988
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC---------Ccccccchheee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---------QEISTRPFQLVT 305 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---------~~~~~~~~~~~~ 305 (371)
+++..+ ..+.+.+.+..++++|+++|++|+ ..+...+++++++ |+++.+|..... ....++...+.+
T Consensus 188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 887655 455566666554489999999997 6689999999996 999999864321 011222222344
Q ss_pred ceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 306 GRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 306 ~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+.++.++.+..+. ..+.+..+++++.++.+++.....+.|+++++++|++.+.+++.. |++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 6777776543221 123467788889888877643345679999999999999987776 88864
No 94
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=9.1e-36 Score=277.34 Aligned_cols=312 Identities=22% Similarity=0.258 Sum_probs=243.3
Q ss_pred cceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.++++ ++++++.|.|.+.+++|+|++.++++|++|+..+.|..+.. .+|.++|||++|+|+++ .++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999986 69999999999999999999999999999999988876432 45788999999999999 456899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+. ..|.. .+ |+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~-~~------------------g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMN-TD------------------GGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCC-CC------------------ceeEEEEEEchhhEEECCCC
Confidence 9999986421 01111 22 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcC--CCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTA--KVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+++++|+.+++.+.+||.++.... ++. .+++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999999875544 335 4579999998 9999999999999999 7999999999999999999988
Q ss_pred EecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGT 312 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~ 312 (371)
+++..+ . ...+.+...+ ++|+++|++++ ..+..++++++++ |+++.+|..... ...++...+ .++.++.++
T Consensus 195 ~~~~~~--~--~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd05280 195 VLDRED--L--LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGI 267 (325)
T ss_pred EEcchh--H--HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEE
Confidence 887654 1 1223333444 89999999998 5699999999996 999999875322 224444444 457788776
Q ss_pred ecCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 313 AFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 313 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
....... ...++.+.+++..+.. +.+.++|+++++++|++.+.+++.. |+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 268 DSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred EeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 6543211 0122334444444422 2367899999999999999988876 988864
No 95
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.1e-35 Score=272.53 Aligned_cols=297 Identities=21% Similarity=0.237 Sum_probs=241.2
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||++++.+.+ | +++.+.|.|.+.++||+|++.++++|+.|++...+. ..|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 7899998754 4 777899999999999999999999999999876522 23568999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 76 Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG-------------------------------AM------------------GAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec-------------------------------CC------------------cceeeEEEEchHHeEECCCCC
Confidence 99997431 12 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++++.+++.+.+||+++...... +|++|+|+|+ |.+|.+++++|+.+|+ +|+.+++++++.+.++++|++..+..
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999988666555 5999999988 9999999999999999 89999899999999999998765533
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee---ceEEEeeecC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT---GRVWKGTAFG 315 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~---~~~~~g~~~~ 315 (371)
.. +..++++|+++|++|+. .+..++++++.+ |+++.+|... .....++...+.. +.++.++.+.
T Consensus 185 ~~----------~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 185 GS----------ELSGAPVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred cc----------cccCCCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 22 12224799999999985 589999999996 9999998753 2223333333332 6777776654
Q ss_pred C-CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 G-FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. ......++.+++++.++++++. +.++++++++++|++.+.+++.. |+++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2 1123467788999999998743 66899999999999999887776 998864
No 96
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.4e-35 Score=272.59 Aligned_cols=311 Identities=25% Similarity=0.393 Sum_probs=248.5
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||++++...+.+ +++.+.+.|.+.+++|+||+.++++|+.|+....|..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 789999877643 77888888889999999999999999999999888765556688999999999999995 57999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.... ++.. .+ |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGRT-FD------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCCC-CC------------------cccceEEEcCHHHcEeCCCCC
Confidence 9999865310 0000 12 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++++.+++++.+||.++....++++|++|||+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999988888999999999988 9999999999999999 79999899999999999999887754
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcc----cccchheeeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQLVTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~~~~~~~~~~~g~~~ 314 (371)
. .++.+.+.+. ++++|+++|++++ ..+..++++++++ |+++.+|........ ......+.++.++.++..
T Consensus 195 -~--~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -D--GAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -C--ccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 3 3566667777 4499999999998 5699999999996 999999864221111 111111233566665543
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
.... ...+..+++++.++.+++ ..++.|+++++++|++.+.+++.. |+++
T Consensus 269 ~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 269 GDVP-QTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhhh-HHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 2211 235777889998988764 356889999999999999887765 7765
No 97
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=8.9e-36 Score=275.14 Aligned_cols=301 Identities=28% Similarity=0.396 Sum_probs=230.0
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCC----CCcccccceeEE---EEEeC-CCCCCCCCCCEEee
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL----FPCILGHEAAGI---VESVG-EGVTEVQPGDHVIP 85 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~----~p~v~G~e~~G~---V~~~G-~~v~~~~~Gd~V~~ 85 (371)
....+.++|.|++++++|++.++++|+.|+.+..|.+.... +|.+++.++.|+ +...| ..+..+..||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 55668999999999999999999999999999999876554 776655555555 44444 22344555655542
Q ss_pred cCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhh
Q 017431 86 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 165 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa 165 (371)
. ...|+|+||+.+|...++++|+++++++||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 222499999999999999999999999999
Q ss_pred hccccchhhhhhhhhcC------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 166 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~------~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++|.++.|||.+++... ++++|++|||+|+ |++|++|+|+|++.|+ ..+++.+++++.++++++|+++++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 9999999999977 8999999999999996 55666688999999999999999999
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch--h-eee-----ceEEE
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF--Q-LVT-----GRVWK 310 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~--~-~~~-----~~~~~ 310 (371)
++ .++.+.+++.+.++||+||||+|+. .......++... |+...++.... ........ + ... ...+.
T Consensus 210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
T KOG1198|consen 210 KD--ENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGD-ELANYKLDDLWQSANGIKLYSLGLK 284 (347)
T ss_pred CC--HHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccc-cccccccccchhhhhhhhheeeeee
Confidence 99 8999999999844999999999995 477777888875 65444433211 11111100 0 000 11111
Q ss_pred eeec---CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 311 GTAF---GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 311 g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
+... ......+.++.+.+++++++++ +.+.+.||++++.+|++.+.++... |+++++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~ie~gkik--p~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 285 GVNYRWLYFVPSAEYLKALVELIEKGKIK--PVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred ccceeeeeecCCHHHHHHHHHHHHcCccc--CCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 1111 1112346788899999999655 6688999999999999999987776 99998864
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.4e-35 Score=273.28 Aligned_cols=298 Identities=19% Similarity=0.283 Sum_probs=248.5
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 92 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~ 92 (371)
+++++.|.|++.+++|+|++.++++|+.|...+.|.... ..+|.++|||++|+|+++|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 677788899999999999999999999999988776543 246788999999999999999999999999985420
Q ss_pred CCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccch
Q 017431 93 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 172 (371)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ 172 (371)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 2 3999999999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHh
Q 017431 173 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 173 ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~ 251 (371)
+||+++.....+.+|++|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++|+++++++.. ..+...+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence 99999888888999999999988 8999999999999999 7888888888899999999999988765 567778888
Q ss_pred hcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc-------cCc
Q 017431 252 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS-------RSQ 322 (371)
Q Consensus 252 ~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~-------~~~ 322 (371)
.+++ ++|+++||+|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.++.+..+.. ...
T Consensus 202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 8887 9999999999955 67889999996 999999875432 2344444444 577777776544321 124
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 323 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+..+++++.++.+.+ .+++.|+++++++|++.+.+++.. |++++
T Consensus 279 ~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 279 FAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 667888888888764 357889999999999999987766 88763
No 99
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.2e-34 Score=268.26 Aligned_cols=301 Identities=24% Similarity=0.311 Sum_probs=241.3
Q ss_pred cCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccc-cCCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEee
Q 017431 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIP 85 (371)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~ 85 (371)
+++. +++.+++.|++.++||+|++.++++|+.|+..+ .|.... ...|.++|+|++|+|+++|++++.+++||+|++
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 999999999999999999999999999999887 665422 124778999999999999999999999999985
Q ss_pred cCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhh
Q 017431 86 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 165 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa 165 (371)
.+ .|+|++|+.++.+.++++|+++ ..++
T Consensus 82 ~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~ 109 (312)
T cd08269 82 LS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQA 109 (312)
T ss_pred ec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhhH
Confidence 32 1399999999999999999998 2333
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
....+++++++++. ..+++++++|||+|+|.+|.+++++|+.+|++.|+++++.+++.++++++|++++++... ..+
T Consensus 110 ~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~ 186 (312)
T cd08269 110 FPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EAI 186 (312)
T ss_pred HhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cCH
Confidence 22367888998875 788999999999988999999999999999944999989999999999999988887655 667
Q ss_pred HHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCCC-cccCc
Q 017431 246 QQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGF-KSRSQ 322 (371)
Q Consensus 246 ~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~-~~~~~ 322 (371)
.+.+.+.+++ ++|+++||+|+.......+++|+++ |+++.+|... .....++... ..++..+.++..... ...+.
T Consensus 187 ~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (312)
T cd08269 187 VERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEG 264 (312)
T ss_pred HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhH
Confidence 7888888877 9999999998877789999999996 9999998643 2222333222 223555555433221 22357
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEE
Q 017431 323 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVL 367 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl 367 (371)
++.+++++.++.+++.+.+.++|+++++++|++.+.+++. +|+++
T Consensus 265 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 265 MREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 8889999999988764456788999999999999988754 48886
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.8e-34 Score=268.55 Aligned_cols=311 Identities=23% Similarity=0.269 Sum_probs=240.0
Q ss_pred ceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 3 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||+++...+.| ++++++|+|.+.+++|+||+.++++|++|+..+.|.++. ..+|.++|||++|+|++ +.++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 68888888775 789999999999999999999999999999988887643 24688899999999998 55678999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.+.. .|.. .+ |++++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVS-HD------------------GGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCC-CC------------------ccceEEEEEchhheEECCCCC
Confidence 9999864310 0100 12 399999999999999999999
Q ss_pred Ccchhhhccccchhhhhhhhhc--CCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNT--AKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
++++++.+++.+.+||.++... ..+.+++ +|||+|+ |.+|++++++|+++|+ +++++++++++.+.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999999999998876433 3488898 9999998 9999999999999999 77777777888899999999888
Q ss_pred ecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~ 314 (371)
++..+ ... .+...+++++|+++||+|+. .+..++++++++ |+++.+|.... ...+.+...+ .++.++.++..
T Consensus 195 ~~~~~--~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDRED--LSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred Ecccc--HHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence 87654 222 34455544799999999985 589999999996 99999987532 2233322333 44777777654
Q ss_pred CCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..... ...+..+.+++..+.++. . .+.|+++++++|++.+.+++.. |+++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 268 VYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 32111 012344555665666542 2 4689999999999999988877 988763
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2.2e-34 Score=268.33 Aligned_cols=314 Identities=19% Similarity=0.261 Sum_probs=238.7
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++++ +++++.|.|.+.++||+||+.++++|++|.....+... ...+|.++|||++|+|++.| ++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 899999988875 88999999999999999999999999999876643211 22458889999999999965 46799
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+.. .|.. .+ |+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVS-HH------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence 99999864320 1111 22 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcC--C-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTA--K-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~--~-~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+++++++.+++.+.|||.++.... . ..++++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 999999999999999988774332 2 345789999988 9999999999999999 8999999999999999999988
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 313 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~ 313 (371)
+++.++ . ..+.+.+.+++++|+++|++|+ ..+..++++++++ |+++.+|... ....++....+ .++.++.++.
T Consensus 195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEEE
Confidence 887654 2 2444555544489999999998 5689999999996 9999998752 22233333333 3477777764
Q ss_pred cCCCcccCcHHHHHHHHHcCCCC---CCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 314 FGGFKSRSQVPWLVDKYMKKEIK---VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..... ......+++.+.. .+. ....+.++|+++++++|++.+.+++.. |+++++
T Consensus 269 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 269 SVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred eEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 32110 1122334443332 222 122357999999999999999988776 988864
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.6e-34 Score=268.96 Aligned_cols=312 Identities=19% Similarity=0.199 Sum_probs=249.2
Q ss_pred cceEEeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 017431 2 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 2 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
|||+++.+++++ ++++++|.|.+.+++|+|++.++++|++|+..+.+..+..++|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 789999998874 666778888889999999999999999999888776654456778999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||+|+..... . .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~-------------------------~---~~------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGDI-------------------------T---RP------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCCC-------------------------C---CC------------------ccceEEEEEchHHeeeCC
Confidence 9999999753210 0 12 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~ 229 (371)
+++++++++.+++.+.+||.++.+...+.+ |++|+|+|+ |++|++++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999999888888887 999999986 999999999999999 7 89999999999999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceE
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRV 308 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~ 308 (371)
+|++++++..+ .+.+.+.....+++|+++|++++...+..++++++.+ |+++.+|... . .++...+ .++.+
T Consensus 194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccce
Confidence 99988887653 3445555443338999999999767799999999996 9999998642 2 2233333 34566
Q ss_pred EEeeecCCC--cc-------cCcHHHHHHHHHcCCCCCCCc-eeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 309 WKGTAFGGF--KS-------RSQVPWLVDKYMKKEIKVDEY-VTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 309 ~~g~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+.+..+... .. ...+..+++++.++.+++... ....++++++++|++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 665443221 00 123667888998998774311 12457999999999999988776 88764
No 103
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.6e-34 Score=271.88 Aligned_cols=311 Identities=23% Similarity=0.270 Sum_probs=239.4
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCC-CCeEEEEEeeeecCccccccccCCCC---------------CCCCCcccccc
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE 62 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~v~G~e 62 (371)
|||+++++++++ +++++.+.|.|. ++||+|+|.++++|++|+....|... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 899999998886 899999999994 99999999999999999998877421 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCccee
Q 017431 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 142 (371)
Q Consensus 63 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 142 (371)
++|+|+++|++++++++||+|+..+. .+..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~----------------------------------------------~~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVP----------------------------------------------PWSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecC----------------------------------------------CCCCccce
Confidence 99999999999999999999985431 01124999
Q ss_pred eeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017431 143 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 217 (371)
Q Consensus 143 ~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v 217 (371)
+|+.++.+.++++|+++++++++.+++.+.+||+++.+...+.+ |++|+|+|+ |++|++++++|+++|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999999877777754 999999986 9999999999999999 67777
Q ss_pred cCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC--Cc
Q 017431 218 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--QE 295 (371)
Q Consensus 218 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~ 295 (371)
.++ ++.+.++++|.+.+++... ..+.+.+... +++|+++|++|+. ....++++++++ |+++.+|..... ..
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDK 266 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCccccccc
Confidence 654 6778889999988887655 4444444331 3899999999985 689999999996 999999854211 11
Q ss_pred ccc--cch----heee-ceE-E-Eee---ecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee
Q 017431 296 IST--RPF----QLVT-GRV-W-KGT---AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL 363 (371)
Q Consensus 296 ~~~--~~~----~~~~-~~~-~-~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~ 363 (371)
... ..+ .+.. ... + ... +.........+..+++++.++.+.+ .+++.|+++++++|++.+.+++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~ 344 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHAR 344 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCc
Confidence 111 000 0000 000 0 000 0000112346888999999988653 367899999999999999887765
Q ss_pred -EEEEe
Q 017431 364 -RCVLK 368 (371)
Q Consensus 364 -kvvl~ 368 (371)
|++++
T Consensus 345 ~~vv~~ 350 (350)
T cd08248 345 GKTVIK 350 (350)
T ss_pred eEEEeC
Confidence 87763
No 104
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=3.8e-34 Score=248.21 Aligned_cols=298 Identities=23% Similarity=0.282 Sum_probs=240.1
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEeecCCCCC
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAEC 91 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G--~~v~~~~~Gd~V~~~~~~~~ 91 (371)
|+++++++|+|+++|||+|..+.++++. +..+....+..--|.-+|..++|.++... |+...|++||.|+...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~---- 101 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS---- 101 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc----
Confidence 9999999999999999999999999883 33333333333346667777665444433 4567899999997432
Q ss_pred CCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhh--hccc
Q 017431 92 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC--LLGC 169 (371)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa--~~~~ 169 (371)
+|++|..++.+.+.|++++.-+..+. .+.+
T Consensus 102 ------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 102 ------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred ------------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 89999999999999998765444433 3778
Q ss_pred cchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEecCCCCCchHHH
Q 017431 170 GVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQ 247 (371)
Q Consensus 170 ~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~ 247 (371)
+..|||.+|.+.+.+++|++|+|.|| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.+.++||+. .++.+
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~ 210 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQ 210 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHH
Confidence 99999999999999999999999987 9999999999999999 99999999999999987 99999999999 79999
Q ss_pred HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCC--CCcccccc----hheeeceEEEeeecCCC-c--
Q 017431 248 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS--GQEISTRP----FQLVTGRVWKGTAFGGF-K-- 318 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~~~~~~~----~~~~~~~~~~g~~~~~~-~-- 318 (371)
.+.+..+.|+|+.||++|+ ..+...+..|+.. +|++.+|.... ....+..+ ..+.+.+++.|+-.... .
T Consensus 211 ~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~ 288 (340)
T COG2130 211 ALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR 288 (340)
T ss_pred HHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence 9999999999999999999 6699999999995 99999986421 11122222 22233788888877332 1
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
..+..+++.+++++|+++.+. +-+-.|+++++||..|.+++.. |.|+++.|
T Consensus 289 ~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 289 FPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 124577899999999999875 3344799999999999999998 99999865
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.3e-33 Score=258.61 Aligned_cols=309 Identities=27% Similarity=0.355 Sum_probs=249.8
Q ss_pred ceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 3 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||+.+..++.+ +.+.+.+.+.+.+++|+|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 56677666654 677788877789999999999999999999988876644 457789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.. .. |+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------PP------------------GAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------CC------------------CceeEEEEecHHHceeCCCCCC
Confidence 9998531 01 3899999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
..+++.+++.+.++|.++....++.+|++|||+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999999999999999888889999999999996 9999999999999999 789998999999999999998888766
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 317 (371)
+ ..+...+.+.+.+ ++|++++|+++ .....++++++++ |+++.+|..... ...++...+ .++.++.+.....+
T Consensus 190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 D--EDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred c--hhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence 5 5677778888777 89999999998 5689999999996 999999864322 222233323 34555554433222
Q ss_pred c-c----cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 318 K-S----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 318 ~-~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. . ...+..+++++.++.+.+. .++.|+++++++|++.+.+++.. |+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1 1 1234567888888877643 56889999999999999887776 888753
No 106
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=4.1e-33 Score=259.47 Aligned_cols=312 Identities=18% Similarity=0.233 Sum_probs=242.7
Q ss_pred cceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++. .+++++.|.|+|.+++|+|++.++++|++|+..+.|..+. ..+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 89999998885 3999999999999999999999999999999988876532 23577899999999999 6677899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.... ++. +..|+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~--------------~~~-----------------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG--------------VGE-----------------------------RHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc--------------CCC-----------------------------CCCCcceeEEEEchHHeeeCCCC
Confidence 99999864210 000 01239999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhh--hcCCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
++.++++.+++.+++++.++. +..+.. ++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999886653 123444 6789999988 9999999999999999 7888888999999999999999
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 313 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~ 313 (371)
++++++ +...+..++++++|.++|++++ ..+...+..++.+ |+++.+|.... ....++...+ .++.++.+..
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence 888755 2224555555579999999998 4577888889996 99999987532 2222333333 4577777765
Q ss_pred cCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 314 FGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 314 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+..... .+.+..+++++.++.+++ +.+.++++++++|++.+.+++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 332211 123555666777776643 36899999999999999988877 888864
No 107
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=3.2e-33 Score=259.09 Aligned_cols=309 Identities=24% Similarity=0.322 Sum_probs=251.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.+++.+ +++.+.+.|.+.+++|+|++.++++|+.|+....|.++. ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999987654 788888888889999999999999999999888776533 24678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL-------------------------------AG------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec-------------------------------CC------------------CceeEEEEcCHHHhccCCCC
Confidence 999997531 12 29999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.++..+.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999888888999999999987 9999999999999999 7999989889999889999888877
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
... ..+...+.+.+.+ ++|++++++|+.. ....++++.++ |+++.+|..... ...+....+ .++.++.++...
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeecc
Confidence 665 5666777777766 8999999999854 88899999996 999999864322 123333333 347777777654
Q ss_pred CCccc-------CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 316 GFKSR-------SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 316 ~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
..... ..+.++++++.++++++ ..++.|+++++++|++.+.+++.. |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 32110 12455777887887653 367899999999999999887665 7663
No 108
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=3.1e-33 Score=259.52 Aligned_cols=315 Identities=23% Similarity=0.339 Sum_probs=251.9
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++..++.+ +.+.++|.|.+.+++|+|++.++++|++|+....|..+. ...|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 789999887654 888899999999999999999999999999988876542 35788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+.. . .+ .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~-----------~------------~~---~~------------------g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG-----------W------------GR---RQ------------------GTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc-----------c------------CC---CC------------------cceeeEEEecHHHcEeCCCC
Confidence 99999865310 0 00 12 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++++.+||+++....++.+|++|+|+|+ |.+|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999888889999999999987 9999999999999999 8999989999999999999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 315 (371)
... .++.+.+.+.+.+ ++|++++++++. .....+++++.+ |+++.+|.... ...++... +.++.++.+....
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRA--EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGGL--RGTIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCC--cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecCC--cCCCChhHHHhcCceEEeeehh
Confidence 665 5566777777766 899999999985 478889999996 99999987432 12233232 2335555555432
Q ss_pred CCc---ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
... ..+.+..+.+++.++.++. ..++.|++++++++++.+.+++.. |+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 270 TATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 211 1123445566677777653 356889999999999999887776 888753
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.6e-33 Score=258.27 Aligned_cols=312 Identities=24% Similarity=0.338 Sum_probs=247.7
Q ss_pred cceEEeecCC--CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~--~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
|||+++.+++ +.++++++|.|++.+++|+|++.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 8999999999 35999999999999999999999999999999888776544344778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.... + .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~-------------------------~---~~------------------~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL-------------------------A---RG------------------GSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC-------------------------C---CC------------------ccceeEEEeCHHHeEECCCCC
Confidence 9999854210 0 12 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+..+++.+++.+.+||+++.+..++.+|++|+|+|+ |.+|++++++++..|+ .|+.+. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999888889999999999998 8999999999999999 677765 6677788888999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh---eeeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ---LVTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~---~~~~~~~~g~~~ 314 (371)
.. ..+...+.+.+++ ++|++++++++.. ....++++++. |+++.++...... ....+. ..+++.+.....
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T cd08271 193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDAS--PDPPFTRALSVHEVALGAAHD 266 (325)
T ss_pred CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCc--chhHHhhcceEEEEEeccccc
Confidence 55 5566777777776 8999999999855 67789999996 9999997542211 111111 122333333221
Q ss_pred CC-----CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GG-----FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.. ....+.+..+++++.++.+++ ...+.|+++++.+|++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 267 HGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 11 111123566888888888654 346889999999999999887766 888763
No 110
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.6e-33 Score=263.96 Aligned_cols=319 Identities=19% Similarity=0.240 Sum_probs=236.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCC---CCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCC-C
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVT-E 76 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~---~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~-~ 76 (371)
.|++++.++++++++++++.|.| .+++|+|++.++++|++|+..+.+..... ..|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 47899999999988888887766 89999999999999999998775433222 2377899999999999999998 8
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc----ce
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SV 152 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~v 152 (371)
|++||+|++.....| .+.|+|++|++++.. .+
T Consensus 81 ~~~Gd~V~~~~~~~~--------------------------------------------~~~g~~~~~~~v~~~~~~~~~ 116 (352)
T cd08247 81 WKVGDEVCGIYPHPY--------------------------------------------GGQGTLSQYLLVDPKKDKKSI 116 (352)
T ss_pred CCCCCEEEEeecCCC--------------------------------------------CCCceeeEEEEEcccccccee
Confidence 999999986432110 012499999999987 79
Q ss_pred EecCCCCCcchhhhccccchhhhhhhhhcC-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh
Q 017431 153 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~ 229 (371)
+++|+++++.+++.+++.+.|||+++.... .+++|++|||+|+ |.+|++++++|+++|. ++++++.+ +++.+++++
T Consensus 117 ~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~ 195 (352)
T cd08247 117 TRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKK 195 (352)
T ss_pred EECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHH
Confidence 999999999999999999999999987766 7999999999988 7999999999999854 35677654 555667789
Q ss_pred cCCcEEecCCCCCc--hHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhc---cCCceEEEEccCCCCCccc------
Q 017431 230 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH---KGWGTSVIVGVAASGQEIS------ 297 (371)
Q Consensus 230 ~g~~~vi~~~~~~~--~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~---~~~G~iv~~g~~~~~~~~~------ 297 (371)
+|++++++..+.+. .+.+.++..+++ ++|+++||+|+......++++++ ++ |+++.++.... ....
T Consensus 196 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~-~~~~~~~~~~ 273 (352)
T cd08247 196 LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYK-ANYKKDTFNS 273 (352)
T ss_pred hCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCc-ccccchhhhh
Confidence 99988888765211 233334444434 89999999998667889999999 96 99998753211 1100
Q ss_pred -----ccchheeeceEEEeeecC---CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 298 -----TRPFQLVTGRVWKGTAFG---GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 298 -----~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.....+.++.++....+. .....+.+..+++++.++.+++ .+.+.|+++++++|++.+.+++.. |++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 274 WDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 011111111111111100 0011135777888998888653 367899999999999999988776 98876
Q ss_pred c
Q 017431 369 M 369 (371)
Q Consensus 369 ~ 369 (371)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 3
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.5e-33 Score=258.84 Aligned_cols=311 Identities=23% Similarity=0.320 Sum_probs=250.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++.+ +++++.+.|++.+++|+|++.++++|++|+....|.... ...|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 799999988876 888888888899999999999999999999888776532 23577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+.... |.... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~~~------------------~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLGGL------------------QGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcCCC------------------CCceeEEEEecHHHcccCCCC
Confidence 9999985421 00001 239999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++..++.+++.+.+||+++.+..++.+|++++|+|+ |.+|++++++++.+|+ +|+.++++ ++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999999999998888899999999999986 9999999999999999 78888887 8888889999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (371)
... . +.+.+.+.+++ ++|+++|++++. .....+++++++ |+++.++... . ....... .++.++.+..+..
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~~-~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY-GRVVSILGGA-T--HDLAPLS-FRNATYSGVFTLL 265 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC-CEEEEEecCC-c--cchhhHh-hhcceEEEEEccc
Confidence 655 4 77778888877 899999999984 588899999996 9999997642 1 1222211 2355555554321
Q ss_pred --C------cccCcHHHHHHHHHcCCCCCCCcee-eeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 --F------KSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 --~------~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. .....+..+++++.++.++. .++ +.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 0 11235667888888887653 334 889999999999999887666 888864
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.2e-33 Score=258.99 Aligned_cols=305 Identities=25% Similarity=0.321 Sum_probs=239.3
Q ss_pred ceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCCC
Q 017431 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 3 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||+++...+.+ +++++.+.|.|.+++|+|++.++++|++|+..+.|..+.. .+|.++|||++|+|+.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888887765 8899999999999999999999999999999888876432 56889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALT-------------------------------RV------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeC-------------------------------CC------------------cceeeEEEechHHeEECCCCC
Confidence 99998542 11 289999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++++.+++++.+||+++....++.+|++|+|+|+ |.+|++++++|+.+|+ +|+.+++ +++.++++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999999888889999999999987 9999999999999999 7888877 88888989999754 444
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCc--ccccch-----------heee
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPF-----------QLVT 305 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~-----------~~~~ 305 (371)
.. .++... +..++++|++++|+++.. ...++++++.+ |+++.+|....... .++++. ....
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT 263 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence 33 233322 333348999999999965 89999999996 99999986532211 111110 0111
Q ss_pred --ceEEEeeecCC----CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 306 --GRVWKGTAFGG----FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 306 --~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
..+........ ....+.+..+++++.++.++. .+.++|+++++++|++.+.+++.. |+|+
T Consensus 264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 22222222110 011245777889999998763 467889999999999999887766 7765
No 113
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=3.5e-32 Score=252.61 Aligned_cols=311 Identities=23% Similarity=0.306 Sum_probs=252.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+.+..++.+ +.+.+.+.|++.+++|+|++.++++|+.|+....+.++. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 789998887765 777777777789999999999999999999888776543 24578899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+... .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV-------------------------------AG------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc-------------------------------CC------------------CcceeEEEecHHHcEeCCCC
Confidence 999998531 11 28999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++++.++|.++.+...+.++++|+|+|+ |.+|++++++++.+|+ +|+++.+++++.+.++++|.+.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998888899999999999987 9999999999999999 8888888888888888999877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
... ..+...+....++ ++|++++++++ .....++++++++ |+++.+|....... .++...+ .++.++.+....
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YRE--EDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCc--hhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence 654 5566777777776 89999999998 4688999999996 99999986432211 3333333 457888877654
Q ss_pred CCcc-------cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.... ...+..+++++.++.++. .+++.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 3211 112345677887887653 367889999999999999887766 888763
No 114
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.4e-32 Score=251.13 Aligned_cols=315 Identities=27% Similarity=0.389 Sum_probs=249.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.+.+.+ +.+.+.+.|.+.+++|+|++.++++|+.|+....+..... .+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 789999876653 7788888888999999999999999999998887765432 4577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+...+. .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~--------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAADLG--------------------------QY------------------GTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccccC--------------------------CC------------------ccceEEEEechHhcEeCCCC
Confidence 99999865321000 12 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++.+.++|.++.....+.++++|+|+|+ |.+|++++++++..|+ +++.+++++++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999888889999999999988 9999999999999999 8888888888888888899888887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch-heeeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~ 315 (371)
... ..+.+.+.+.+.+ ++|++++++++ .....++++++++ |+++.+|..... ...++.. .+.++.++.+..+.
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDE--EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCC--ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEecc
Confidence 665 5566667777766 89999999999 5588999999996 999999864321 1122222 23446666665543
Q ss_pred CCc-ccCc----HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 316 GFK-SRSQ----VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 316 ~~~-~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
... ...+ +..+.+++.++.+.. ..+..|++++++++++.+.+++.. |++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 211 1122 334455566666553 356889999999999999887766 88875
No 115
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2.6e-32 Score=254.61 Aligned_cols=304 Identities=21% Similarity=0.247 Sum_probs=237.0
Q ss_pred ceEEeecCC------CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCC
Q 017431 3 KAAVAWEPN------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 3 ~a~~~~~~~------~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
|++++.+.+ +.+++++.|.|++.+++|+||+.++++|+.|.....+... +...+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 556665443 1299999999999999999999999999977654444321 1123457899999999999964
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc-cce
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 152 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v 152 (371)
.+++||+|+.. ++|++|+.++. +.+
T Consensus 83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence 79999999732 18999999999 999
Q ss_pred EecCCCCC--cchhhh-ccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 153 AKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 153 ~~lP~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
+++|++++ +.++++ +++++.+||+++.....+.++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999995 445555 88899999999888888999999999986 9999999999999999 8999989999999888
Q ss_pred h-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc----c-cchh
Q 017431 229 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS----T-RPFQ 302 (371)
Q Consensus 229 ~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~----~-~~~~ 302 (371)
+ +|+++++++.+ .++.+.+.+.+++++|+++||+|+ ..+..++++++++ |+++.+|......... + ....
T Consensus 188 ~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd05288 188 EELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI 263 (329)
T ss_pred hhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence 8 99988888766 567777777765589999999998 5699999999996 9999998643221111 1 1222
Q ss_pred eeeceEEEeeecCCCcc--cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 303 LVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 303 ~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+.++.++.++.+..... .+.+..+++++.++.+++.+ ..+++++++++|++.+.+++.. |+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 33467777765433211 13467788899999887653 3568999999999999887665 7663
No 116
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=1.4e-32 Score=248.87 Aligned_cols=268 Identities=32% Similarity=0.467 Sum_probs=218.8
Q ss_pred eEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccc
Q 017431 28 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 106 (371)
Q Consensus 28 eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 106 (371)
||+|+|.++++|+.|++.+.|..+ ....|.++|+|++|+|+++|++++.+++||+|+..+...|+.|.+|+. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999988765 335678899999999999999999999999999999999999999997 565
Q ss_pred cccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCC
Q 017431 107 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 186 (371)
Q Consensus 107 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 186 (371)
.... .+ ....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.+
T Consensus 77 ~~~~---~~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LG-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---ec-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 4432 11 1123499999999999999999999999999999999999999888777799
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g 265 (371)
+++|||+|+|++|++++++++.+|. +|+++++++++.+.++++|.+++++..+ ..+.+.+. .+.+ ++|+++++++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence 9999999996699999999999998 8999999999999999999888887665 44555555 4444 8999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcccCcHHHHHHH
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 329 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 329 (371)
+......++++++++ |+++.++..............+.++.++.++....+ .+++.++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 866689999999996 999999875433222222333445788888765433 356666554
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=1.2e-31 Score=246.54 Aligned_cols=292 Identities=24% Similarity=0.362 Sum_probs=231.8
Q ss_pred CCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccC
Q 017431 21 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS 99 (371)
Q Consensus 21 ~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 99 (371)
.|++.+++|+|++.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|++++++++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 57789999999999999999999988876543 2568899999999999999999999999999864210
Q ss_pred CCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhh
Q 017431 100 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~ 179 (371)
.+ |+|++|+.++.+.++++|+++++++++.++..+.+||.++
T Consensus 72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 12 3999999999999999999999999999999999999987
Q ss_pred hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-Cc
Q 017431 180 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
+...+++|++|+|+|+ |.+|++++|+++++|+ +++++++++++.+.++++|++.+++... .++...+.+.+++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence 5789999999999966 9999999999999999 8999989999999999999998888765 5677778888877 99
Q ss_pred cEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC------cccCcHHHHHHHHH
Q 017431 258 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF------KSRSQVPWLVDKYM 331 (371)
Q Consensus 258 dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~ 331 (371)
|+++|++++ ......+++++++ |+++.+|.........+....+.++..+....+... ...+.+.++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 6688999999996 999998764322111222222222222222221110 11134666788888
Q ss_pred cCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 332 KKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 332 ~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
++.++. ..++.|++++++++++.+.+++.. |+++
T Consensus 269 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 269 EGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 888663 356889999999999999887766 7663
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=7.9e-32 Score=248.42 Aligned_cols=301 Identities=24% Similarity=0.298 Sum_probs=239.8
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
|||+++..++.. +.+.+.+.|++.+++|+|++.++++|+.|+..+.|... ...+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789999887754 56778888889999999999999999999998877652 2345888999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||+|+..+.. + .+ |+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~-------------------------~---~~------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------T---RG------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC-------------------------C---CC------------------CcceeEEEecHHHhccCC
Confidence 9999999865310 0 12 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++..++.+++.+.++|+++.....+.++++|||+|+ |.+|++++++++..|+ +|+++++++ +.+.++++|.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998877777999999999997 9999999999999999 788877766 7888888998888
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (371)
++... .++.. .+.+ ++|++++++++. ....++++++++ |+++.+|....... ..+.++.++....+
T Consensus 193 ~~~~~--~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~ 259 (309)
T cd05289 193 IDYTK--GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV 259 (309)
T ss_pred EeCCC--Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence 77654 33322 3344 899999999985 689999999996 99999987532111 11222444444433
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
... ...+..+++++.++.++ +.+++.|+++++++|++.+.+++.. |+++
T Consensus 260 ~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 260 EPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred ccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 221 35688899999888765 3467899999999999999877665 6653
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=5.7e-31 Score=244.11 Aligned_cols=309 Identities=30% Similarity=0.449 Sum_probs=248.4
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCC-CCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
|+|+++..++.+ +++.+.+ |.+. +++++|++.++++|++|+..+.|.... ...|.++|||++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 789999865544 7777777 7665 599999999999999999988776532 2346689999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+..+ .. |++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT-------------------------------GQ------------------GGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec-------------------------------CC------------------ceeEEEEEcCHHHceeCCC
Confidence 9999998542 01 3899999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++.+++.+...+.+||.++.....+.++++|+|+|+ |.+|++++++|+..|+ .|+.+++++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999998899999999998877888999999999998 9999999999999999 789998889999999999988877
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hheeeceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~ 314 (371)
+... .++.+.+.+.+++ ++|++++++|+ .....++++++++ |+++.+|....... .+.. ..+.++.++.+..+
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRD--PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCC--ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 7655 5677778888777 89999999998 5688999999996 99999986432111 1212 12234667777655
Q ss_pred CCCcc------cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFKS------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+.. ...+..+++++.++.+. +..++.|+++++++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 43321 13466788888888765 3467889999999999998877665 77763
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-30 Score=243.06 Aligned_cols=310 Identities=23% Similarity=0.317 Sum_probs=242.3
Q ss_pred ceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 3 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 3 ~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||+++...+. .+.+.+.+.|++.+++|+|++.++++|+.|+..+.|..+. ...|.++|||++|+|+.+|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 5667766654 3788888888899999999999999999999988876542 245778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLT-------------------------------RF------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEec-------------------------------CC------------------CeeeeEEEecHHHeEECCCCC
Confidence 99998542 11 289999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHhcCCcEEec
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~~~~~g~~~vi~ 237 (371)
++.+++.+++++.++|+++.+...+++|++|+|+|+ |.+|++++++|+.+ . .+.++. ..+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEee
Confidence 999999999999999999888889999999999998 99999999999999 2 233332 3355778888899988887
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC--Cccc-------------ccchh
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--QEIS-------------TRPFQ 302 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~~~-------------~~~~~ 302 (371)
... ..+...+...+++++|+++|++|+. ....++++++++ |+++.+|..... ...+ +.+..
T Consensus 190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 190 YRT--QDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred CCC--CcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 765 5677777777655899999999984 588999999996 999999864321 1111 11111
Q ss_pred -eeeceEEEeeecCCCcc-----cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 303 -LVTGRVWKGTAFGGFKS-----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 303 -~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+.++.++.++.+..... ...+..+++++.++.+.. ..++.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 23367777765432111 113566888888888654 356889999999999999887766 988864
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.1e-31 Score=243.52 Aligned_cols=295 Identities=25% Similarity=0.314 Sum_probs=226.7
Q ss_pred EEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCC
Q 017431 15 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 91 (371)
Q Consensus 15 ~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~ 91 (371)
++++.|.|++.+++|+|++.++++|++|+..+.|..+. ...|.++|||++|+|+++|++++.+++||+|+.....+
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 78889999999999999999999999999988776531 23567899999999999999999999999998643210
Q ss_pred CCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccc
Q 017431 92 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 171 (371)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~ 171 (371)
.+ |+|++|+.++.+.++++|+++++++++.+++.+
T Consensus 94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 12 389999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHH
Q 017431 172 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 172 ~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 250 (371)
.+||+++.....+++|++|+|+|+ |.+|++++++|+.+|+ +|++++++ ++.+.++++|.+++++... ..+. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence 999999877778999999999998 9999999999999999 78888765 7788889999988887655 2332 3
Q ss_pred hhcCC-CccEEEEccCCH-HHHHHHHHHhccCCceEEEEccCCCCCcccc---cchheeeceEEEeeecCCCcccCcHHH
Q 017431 251 DLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEIST---RPFQLVTGRVWKGTAFGGFKSRSQVPW 325 (371)
Q Consensus 251 ~~~~g-g~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~ 325 (371)
..+.+ ++|++++|+++. ......+..++++ |+++.+|.......... ..........+....... ..+.+..
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHH
Confidence 44555 899999999852 2234444458995 99999987532221111 011111112222222211 1457888
Q ss_pred HHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 326 LVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 326 ~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+++++.++.++. .++++|+++++++|++.+.+++.. |+++
T Consensus 279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 999998888653 467899999999999999887665 6653
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=5.6e-30 Score=233.67 Aligned_cols=282 Identities=22% Similarity=0.279 Sum_probs=226.1
Q ss_pred CeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccc
Q 017431 27 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 106 (371)
Q Consensus 27 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 106 (371)
+||+||+.++++|++|++...|..+ .+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 5799999999999999998887652 4578899999999999999999999999997531
Q ss_pred cccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCC
Q 017431 107 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 186 (371)
Q Consensus 107 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 186 (371)
+ |+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus 60 -------------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------P------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------c------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1 399999999999999999999999999999999999999888889999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC--CcEEecCCCCCchHHHHHHhhcCC-CccEEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 262 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid 262 (371)
|++|+|+|+ |.+|++++++++.+|+ +++++.+++++.+.+++++ ++.+++... ..+.+.+.+.+.+ ++|++++
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence 999999975 9999999999999999 8899988888899888888 677777655 5677778888777 8999999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCc------ccCcHHHHHHHHHcCCCC
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK------SRSQVPWLVDKYMKKEIK 336 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 336 (371)
++++. .+..++++++++ |+++.+|.........+....+.++.++....+.... ....+..+++++.+++++
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 99996 699999999996 9999998643221112222222223444443322110 112466788888888865
Q ss_pred CCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 337 VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 337 ~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+..++.++++++++|++.+.+++.. |+++
T Consensus 264 --~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 --PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred --cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 4456789999999999999887765 7653
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=2.1e-29 Score=229.68 Aligned_cols=276 Identities=22% Similarity=0.356 Sum_probs=221.1
Q ss_pred EEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccC
Q 017431 31 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 110 (371)
Q Consensus 31 V~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (371)
||+.++++|++|++...|.++ .|.++|||++|+|+++|+.++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 889999999999999887653 356899999999999999999999999997431
Q ss_pred CCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEE
Q 017431 111 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 190 (371)
Q Consensus 111 ~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~V 190 (371)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+.+|++|
T Consensus 56 ---------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------P------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------C------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 1 3999999999999999999999999999999999999988788889999999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCC
Q 017431 191 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN 266 (371)
Q Consensus 191 lI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~ 266 (371)
+|+|+ |.+|++++++++.+|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+.+++ ++|+++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999989999999999998 67777655 5566777777776 89999999996
Q ss_pred HHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCc-----ccCcHHHHHHHHHcCCCCCCCce
Q 017431 267 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK-----SRSQVPWLVDKYMKKEIKVDEYV 341 (371)
Q Consensus 267 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i 341 (371)
.....++++++++ |+++.+|.........++...+.++.++.+..+.... ....+..+++++.++.+++. .
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 6688999999996 9999998643211122222223334444444332110 11245667888888876643 4
Q ss_pred eeeeecccHHHHHHHHhCCCee-EEE
Q 017431 342 THNMTLGEINEAFRYMHGGDCL-RCV 366 (371)
Q Consensus 342 ~~~~~~~~~~~A~~~~~~~~~~-kvv 366 (371)
.+.|++++++++++.+.+++.. |++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 5789999999999999887655 665
No 124
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=7.1e-29 Score=244.24 Aligned_cols=293 Identities=19% Similarity=0.243 Sum_probs=245.1
Q ss_pred eEEEEeeCC---CCCCCeEEEEEeeeecCccccccccCCCCCCCCC-------cccccceeEEEEEeCCCCCCCCCCCEE
Q 017431 14 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP-------CILGHEAAGIVESVGEGVTEVQPGDHV 83 (371)
Q Consensus 14 ~~~~~~~~~---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~v~G~e~~G~V~~~G~~v~~~~~Gd~V 83 (371)
++|.+-|.. +..++.=++-|-|+.+|.+|+....|+.+....| +++|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 666666654 2356667999999999999999999988766544 5789999986 5679999
Q ss_pred eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcch
Q 017431 84 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 163 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~ 163 (371)
+.... -. ++++.+.++.+++|.+|.+..+++
T Consensus 1499 M~mvp-------------------------------Ak------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVP-------------------------------AK------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeee-------------------------------hh------------------hhhhhhhcchhhhhhCCcccchhh
Confidence 75431 11 889999999999999999999999
Q ss_pred hhhccccchhhhhhhhhcCCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEEecC
Q 017431 164 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNP 238 (371)
Q Consensus 164 aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~vi~~ 238 (371)
|+..|+.|.|+|++|..++..++|++|||+ |+|++|+|||.+|.+.|+ .|+.+..+++|++++.++ ...++-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 669999999999999999 899999999999988653 33556666
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .+|.+.+...|+| |+|+|+|+... +-++.+++||+.. |+|..+|...-...-++.+.-|.+|.++.|..+.+.
T Consensus 1609 Rd--tsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RD--TSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cc--ccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 66 8899999999999 99999999988 4499999999997 999999987655555667777778888888876554
Q ss_pred cc--cCcHHHHHHHHHcCCCC--CCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 318 KS--RSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 318 ~~--~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
.. .+++.++..++++|.-. +.|+.+++|+-.++++||++|.+++++ |||+++.
T Consensus 1685 mege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 32 24567788888776433 567789999999999999999999998 9999874
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1.1e-27 Score=218.17 Aligned_cols=250 Identities=28% Similarity=0.389 Sum_probs=195.1
Q ss_pred CCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCcccccc
Q 017431 48 GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 127 (371)
Q Consensus 48 g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~ 127 (371)
|.++. ++|.++|||++|+|+++|++++.+++||+|+...
T Consensus 14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------- 52 (277)
T cd08255 14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---------------------------------------- 52 (277)
T ss_pred cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----------------------------------------
Confidence 44444 4889999999999999999999999999997431
Q ss_pred CCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHH
Q 017431 128 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAK 207 (371)
Q Consensus 128 ~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~ 207 (371)
.|++|+.++.+.++++|+++++.+++.+ +++++||+++ ...+++++++|||+|+|.+|++++++|+
T Consensus 53 ------------~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~ 118 (277)
T cd08255 53 ------------PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK 118 (277)
T ss_pred ------------CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 6899999999999999999999998888 7899999987 4788999999999988999999999999
Q ss_pred HcCCCeEEEEcCChhhHHHHHhcC-CcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEE
Q 017431 208 AAGASRVIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 208 ~~g~~~v~~v~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv 285 (371)
++|+++|+++++++++.++++++| .+.++.... ..+.+ ++|++||+++........+++++++ |+++
T Consensus 119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~ 187 (277)
T cd08255 119 AAGAREVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVV 187 (277)
T ss_pred HcCCCcEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEE
Confidence 999944999999999999999999 444443321 12234 8999999998777789999999996 9999
Q ss_pred EEccCCCCCcccccchhee-eceEEEeeecCCC---------cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHH
Q 017431 286 IVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF---------KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 355 (371)
Q Consensus 286 ~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~ 355 (371)
.+|..... .... ...+. +..++.+...... ...+.+.++++++.++.++. .+.++|+++++++|++
T Consensus 188 ~~g~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~ 263 (277)
T cd08255 188 LVGWYGLK-PLLL-GEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYR 263 (277)
T ss_pred EEeccCCC-cccc-HHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHH
Confidence 99875332 1111 11122 2334444443221 11256888999999988653 3578899999999999
Q ss_pred HHhCC--CeeEEEE
Q 017431 356 YMHGG--DCLRCVL 367 (371)
Q Consensus 356 ~~~~~--~~~kvvl 367 (371)
.+.++ ...|++|
T Consensus 264 ~~~~~~~~~~k~~~ 277 (277)
T cd08255 264 LLFEDPPECLKVVL 277 (277)
T ss_pred HHHcCCccceeeeC
Confidence 99887 3348764
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=1.2e-24 Score=188.62 Aligned_cols=295 Identities=22% Similarity=0.277 Sum_probs=220.0
Q ss_pred EEEEeeCC-CCCCCeEEEEEeeeecCccccccccCCCCCC-CCCc-----ccccceeEEEEEeCCCCCCCCCCCEEeecC
Q 017431 15 VIEDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPC-----ILGHEAAGIVESVGEGVTEVQPGDHVIPCY 87 (371)
Q Consensus 15 ~~~~~~~~-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~-----v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~ 87 (371)
+..+++++ ++.+++|+||..+-+..+.-...+....+.. --|. +.| ..+|+|++.+. +++++||.|..
T Consensus 25 ~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~S~~--~~~~~GD~v~g-- 99 (343)
T KOG1196|consen 25 TTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVIDSGH--PNYKKGDLVWG-- 99 (343)
T ss_pred eeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEecCC--CCCCcCceEEE--
Confidence 33344544 5689999999999998764322221111110 1122 334 67899999644 68999999963
Q ss_pred CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccc--eEecCC--CCCcch
Q 017431 88 QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAKIDP--QAPLDK 163 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--v~~lP~--~~~~~~ 163 (371)
+. +|.+|..+++.. .+++|. ++++--
T Consensus 100 ----------------------------~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ 129 (343)
T KOG1196|consen 100 ----------------------------IV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSY 129 (343)
T ss_pred ----------------------------ec----------------------cceEEEEecCcchhcccCCCCCccCHhh
Confidence 22 899999887753 344433 444444
Q ss_pred hh-hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCC
Q 017431 164 VC-LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKD 240 (371)
Q Consensus 164 aa-~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~ 240 (371)
.. ++.++.+|||.++++...+++|++|+|-|| |++|+.+.|+|+.+|+ +|+++..+++|.++++ ++|.+..+||.+
T Consensus 130 ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~ 208 (343)
T KOG1196|consen 130 YLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE 208 (343)
T ss_pred hhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC
Confidence 33 467889999999999999999999999987 9999999999999999 9999999999999886 579999999998
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCC-----CCCcccccchheeeceEEEeeecC
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA-----SGQEISTRPFQLVTGRVWKGTAFG 315 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-----~~~~~~~~~~~~~~~~~~~g~~~~ 315 (371)
+.+...++++..+.|+|+.||.+|+ ..+...+..|+.. |+++.+|... .+..+.-....+.+.+.+.|+...
T Consensus 209 -e~~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~ 285 (343)
T KOG1196|consen 209 -ESDLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVS 285 (343)
T ss_pred -ccCHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEee
Confidence 2478888988877799999999999 6699999999995 9999999643 111222223334568888887655
Q ss_pred CCcc--cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 316 GFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 316 ~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
.+.+ .+-++.+..++.+++++...-+.. .|++.++||.-|.+++.. |-++++.
T Consensus 286 d~~d~~~k~ld~l~~~ikegKI~y~edi~~--Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 286 DYLDKYPKFLDFLLPYIKEGKITYVEDIAD--GLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred chhhhhHHHHHHHHHHHhcCceEEehhHHH--HHhccHHHHHHHhccCcccceEEEee
Confidence 4422 234567888889999886544333 699999999999998887 9888775
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.87 E-value=1.9e-22 Score=156.92 Aligned_cols=108 Identities=37% Similarity=0.689 Sum_probs=93.3
Q ss_pred CCeEEEEEeeeecCccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcc
Q 017431 26 AGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 104 (371)
Q Consensus 26 ~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 104 (371)
|+||+|||++++||++|++.+.|. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|+.+..+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999994 4555899999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 105 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 105 ~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
|..... +|+. .+| +|++|+.+|+++++|+
T Consensus 81 c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLG-LDG------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTS-STC------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcC-CCC------------------cccCeEEEehHHEEEC
Confidence 976653 3333 444 9999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.72 E-value=8.7e-17 Score=129.20 Aligned_cols=128 Identities=29% Similarity=0.445 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHH
Q 017431 197 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 275 (371)
Q Consensus 197 ~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~ 275 (371)
++|++++|+|+++|+ +|++++++++|+++++++|+++++++.+ .++.+.+++.+++ ++|++|||+|.+..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 9999999999999999999999999988 6799999999998 99999999998899999999
Q ss_pred HhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCCcccCcHHHHHHHHHc
Q 017431 276 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMK 332 (371)
Q Consensus 276 ~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~ 332 (371)
+++++ |+++.+|... ....+++...+.. ++++.|+.... .++++++++++++
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 99996 9999999975 4566777666655 99999998764 4688888888753
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.44 E-value=2.1e-12 Score=121.76 Aligned_cols=175 Identities=15% Similarity=0.176 Sum_probs=133.7
Q ss_pred hhhhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc
Q 017431 175 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 175 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.++.+..+ ..+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|.+.++++|+..+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence 344444433 4789999999999999999999999999 89999999999999999998432 1 11222
Q ss_pred CCCccEEEEccCCHHHHHHH-HHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCCcccCcHH--HHHHH
Q 017431 254 DGGVDYSFECIGNVSVMRAA-LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVP--WLVDK 329 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~--~~~~~ 329 (371)
.++|++++|+|.+..+... +++++++ |+++.+|.. ..+++...+.. ++++.++..... ..+++ ..+.+
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2589999999998888876 9999996 999999864 23444444443 677777654321 12455 78999
Q ss_pred HHcCCC-CCCCceeee-----eecc-cHHHHHHHHhCCCee--EEEEecC
Q 017431 330 YMKKEI-KVDEYVTHN-----MTLG-EINEAFRYMHGGDCL--RCVLKMQ 370 (371)
Q Consensus 330 ~~~~~~-~~~~~i~~~-----~~~~-~~~~A~~~~~~~~~~--kvvl~~~ 370 (371)
+++|++ ++...++|. |+|+ |+.+++..+.+++.. |+++.++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 999999 888888888 8999 999999999887653 7877653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.32 E-value=4e-11 Score=115.87 Aligned_cols=154 Identities=18% Similarity=0.231 Sum_probs=112.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCC-----------CchHHHHHH
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLV 250 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~-----------~~~~~~~~~ 250 (371)
+..++++|+|+|+|.+|++|++.|+.+|+ +|++++.++++++.++++|++.+ ++..+. ..++.+..+
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 45689999999999999999999999999 89999999999999999999854 554331 112333323
Q ss_pred hh-cC--CCccEEEEccCC-----HHHH-HHHHHHhccCCceEEEEccCCCC-Ccccccchhee--eceEEEeeecCCCc
Q 017431 251 DL-TD--GGVDYSFECIGN-----VSVM-RAALECCHKGWGTSVIVGVAASG-QEISTRPFQLV--TGRVWKGTAFGGFK 318 (371)
Q Consensus 251 ~~-~~--gg~dvvid~~g~-----~~~~-~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~--~~~~~~g~~~~~~~ 318 (371)
+. ++ +++|++|+|++. +.++ ++.++.++++ |+++++|....+ ...+.+...+. +++++.|+.. +.
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc
Confidence 32 33 279999999996 3354 9999999997 999999885322 13444434443 4888888763 22
Q ss_pred ccCcHH-HHHHHHHcCCCCCCCcee
Q 017431 319 SRSQVP-WLVDKYMKKEIKVDEYVT 342 (371)
Q Consensus 319 ~~~~~~-~~~~~~~~~~~~~~~~i~ 342 (371)
..++ ...+++.++.+++.++++
T Consensus 317 --~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 --SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred --hhHHHHHHHHHHhCCccHHHHhc
Confidence 3455 588999998887766554
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.17 E-value=1.2e-11 Score=98.85 Aligned_cols=122 Identities=20% Similarity=0.213 Sum_probs=76.4
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC--CHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeece
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 307 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 307 (371)
||+++++|+++ .++ ...+++|+|||++| ....+..++++| ++ |++|.++. ....+.........
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHHHHHCHHC
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhhhhcccce
Confidence 68999999986 555 22348999999999 655457788888 96 99999874 11111111101112
Q ss_pred EEEeee-cCCC-cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 308 VWKGTA-FGGF-KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 308 ~~~g~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+..... +... ...+.++.+++++++|++++ .+.++|||+++++|++.+++++.. |+||
T Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 67 RYSFLFSVDPNAIRAEALEELAELVAEGKLKP--PIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp EEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEEEEEecCCCchHHHHHHHHHHHHHCCCeEE--eeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 221111 0000 12245999999999999775 478999999999999999999987 9986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.53 E-value=6.4e-07 Score=81.26 Aligned_cols=167 Identities=20% Similarity=0.286 Sum_probs=101.2
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcCC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
...+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++. +...+- ... .++. .+ ...++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~--~d~~-~l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL--GEIE-AL-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE--cchh-hC-CCCCC
Confidence 35688999999999987 88888888888763 799999999988887753 332211 000 1111 11 12234
Q ss_pred CccEEEEcc------CCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcccCcHHHHHHH
Q 017431 256 GVDYSFECI------GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 329 (371)
Q Consensus 256 g~dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 329 (371)
.||+|+... .....++.+.+.|+++ |+++..+..... .+ + ..+.....+.+...... .....+.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~--~-~~~~~~~~~~~~~~~~~---~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL--P-EEIRNDAELYAGCVAGA---LQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC--C-HHHHHhHHHHhccccCC---CCHHHHHHH
Confidence 799998543 2346799999999997 999987654321 11 1 11111111111111111 245566677
Q ss_pred HHcCCCC-CCCceeeeeecccHHHHHHHH--hCCC
Q 017431 330 YMKKEIK-VDEYVTHNMTLGEINEAFRYM--HGGD 361 (371)
Q Consensus 330 ~~~~~~~-~~~~i~~~~~~~~~~~A~~~~--~~~~ 361 (371)
+.+..+. ......+.++++++.++++.+ .++.
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 7664433 222345678899999999988 4443
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.53 E-value=7.7e-07 Score=86.18 Aligned_cols=127 Identities=20% Similarity=0.273 Sum_probs=89.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCC-----------CCchHHHHHHh
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKD-----------HDKPIQQVLVD 251 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~-----------~~~~~~~~~~~ 251 (371)
..++++|+|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+ ++..+ ...++.+..++
T Consensus 161 ~vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 161 KVPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 3467999999999999999999999999 79999999999999999998653 33211 01233333333
Q ss_pred hcC---CCccEEEEcc---CCHH---HHHHHHHHhccCCceEEEEccCCCCCccccc-chh-eee--ceEEEeee
Q 017431 252 LTD---GGVDYSFECI---GNVS---VMRAALECCHKGWGTSVIVGVAASGQEISTR-PFQ-LVT--GRVWKGTA 313 (371)
Q Consensus 252 ~~~---gg~dvvid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~-~~~--~~~~~g~~ 313 (371)
+.. .++|++|+|+ |.+. ..+..++.|+++ +.+|+++....+ .+.+. +.. +.. +.++.+..
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence 333 2799999999 5433 568889999997 999999875433 33333 222 222 36666654
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.29 E-value=1.1e-05 Score=76.84 Aligned_cols=103 Identities=25% Similarity=0.318 Sum_probs=78.2
Q ss_pred hhhhhhhcCCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhh
Q 017431 174 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 174 a~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 252 (371)
+|.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 345554443444 89999999999999999999999999 899999988877666666653 221 22222
Q ss_pred cCCCccEEEEccCCHHHHH-HHHHHhccCCceEEEEccCC
Q 017431 253 TDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 253 ~~gg~dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 291 (371)
.++|++++++|..+.+. ..+..|+++ +.++..|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 16999999999988776 678888996 8888888754
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.21 E-value=2.3e-05 Score=71.68 Aligned_cols=95 Identities=23% Similarity=0.336 Sum_probs=74.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.+++|+|+|+|.+|.++++.++.+|+ +|++++++.++.+.++++|...+ .. .+ +.+.. .++|+||+|++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~----l~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SE----LAEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HH----HHHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999888888888886432 11 11 22221 26999999998
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAAS 292 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~~ 292 (371)
..-..+..++.++++ +.+++++....
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence 754557778889996 99999977543
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.19 E-value=2.4e-05 Score=74.05 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=77.5
Q ss_pred hhhhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc
Q 017431 175 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 175 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.++.+..+ ...|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...++..|.. +.+ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal---- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA---- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH----
Confidence 334444433 4789999999999999999999999999 899998888877666666762 221 11222
Q ss_pred CCCccEEEEccCCHHHHHH-HHHHhccCCceEEEEccCC
Q 017431 254 DGGVDYSFECIGNVSVMRA-ALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~ 291 (371)
.+.|++|+++|.+..++. .+..++++ +.++.+|...
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 258999999999887765 88888996 8998887753
No 137
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.11 E-value=1.5e-07 Score=90.22 Aligned_cols=158 Identities=18% Similarity=0.195 Sum_probs=102.7
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCC
Q 017431 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 138 (371)
Q Consensus 59 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 138 (371)
-|.|+++.+.+|++.+.+ +|+..+.. |+.|..| ++.|..... .|.. .++
T Consensus 90 ~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~-l~~----------------- 138 (417)
T TIGR01035 90 TGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKV-LER----------------- 138 (417)
T ss_pred CchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHH-HHH-----------------
Confidence 588999999999988766 56666666 8888888 445543332 2222 333
Q ss_pred cceeeeEEecccceEe---c-CCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 017431 139 STFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRV 214 (371)
Q Consensus 139 g~~a~~~~v~~~~v~~---l-P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v 214 (371)
.|++++.++. .+.. + +..+|...+|. .-..+..+..++++|+|+|+|.+|..+++.++..|+.+|
T Consensus 139 -lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 139 -LFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred -HHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 8888887765 3332 3 33333222221 001233344678999999999999999999999997689
Q ss_pred EEEcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 215 IGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 215 ~~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
++++++.++. ++++++|.. .+.. .+..+.+ .++|+||+|++.+.
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCC
Confidence 9999988774 477777763 2221 1222222 16999999998754
No 138
>PLN02494 adenosylhomocysteinase
Probab=98.06 E-value=4.2e-05 Score=73.15 Aligned_cols=101 Identities=25% Similarity=0.318 Sum_probs=78.1
Q ss_pred hhhhhhcCCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc
Q 017431 175 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 175 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|... + ...+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence 3344444443 679999999999999999999999999 8999998887766666677642 1 1222222
Q ss_pred CCCccEEEEccCCHHHH-HHHHHHhccCCceEEEEccC
Q 017431 254 DGGVDYSFECIGNVSVM-RAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+|++++++|..+.+ ...++.|+++ +.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 489999999987754 8899999997 999999874
No 139
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.05 E-value=2.9e-05 Score=69.49 Aligned_cols=129 Identities=25% Similarity=0.307 Sum_probs=81.8
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
+|.+|.. +...++.+++++++..+..-. +.. ....+. ..+.++++||-+|+|. |..++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555533 667788899888766554211 111 111121 1256889999999986 888876554 67767999999
Q ss_pred ChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcCC--CccEEEEccCCH---HHHHHHHHHhccCCceEEEEccC
Q 017431 220 DPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 220 ~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~g--g~dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++...+.+++. +....+ ....+ .||+|+...... ..++.+.+.|+++ |.++..|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~--------------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNV--------------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceE--------------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99887776643 221100 01112 599998755442 3467788889997 999987653
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.02 E-value=1.8e-05 Score=73.04 Aligned_cols=109 Identities=20% Similarity=0.194 Sum_probs=78.6
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-H
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-D 225 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~-~ 225 (371)
...+++|+.+..+.++... +...++.++..... -.++.+|+|+|+|.+|..+++.++..|+.+|++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4677889999888777654 56666666422221 24789999999999999999999998887899999988764 6
Q ss_pred HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHH
Q 017431 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 269 (371)
Q Consensus 226 ~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~ 269 (371)
+++++|.. +++. .++.+.+ ..+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HHHHHHH-----hcCCEEEECCCCCch
Confidence 77888873 3322 1122222 158999999998664
No 141
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.88 E-value=0.0001 Score=69.64 Aligned_cols=98 Identities=20% Similarity=0.239 Sum_probs=68.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++........+ ...+.+.+ ..+|++|+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence 34569999999999999999999999 7999999888877664 455432222211 11222222 2699999997
Q ss_pred C---C--HH-HHHHHHHHhccCCceEEEEccCC
Q 017431 265 G---N--VS-VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 265 g---~--~~-~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+ . +. ..+..++.++++ +.++.++...
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~ 270 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQ 270 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCC
Confidence 3 2 22 247777889996 9999998654
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=97.75 E-value=0.0002 Score=73.47 Aligned_cols=137 Identities=24% Similarity=0.319 Sum_probs=88.1
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~ 218 (371)
++++|..+++..++.+ +..+.++|..... ......+|++|||+|+ |++|.+.++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 6677887887777777 6666666652210 0122346899999987 9999999999999999 899999
Q ss_pred CChhhHHHHH-hcCC--c-E--EecCCCCCchHHHHHHhhc--CCCccEEEEccCC------------------------
Q 017431 219 IDPKKFDRAK-NFGV--T-E--FVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN------------------------ 266 (371)
Q Consensus 219 ~~~~~~~~~~-~~g~--~-~--vi~~~~~~~~~~~~~~~~~--~gg~dvvid~~g~------------------------ 266 (371)
++.++.+.+. +++. . . ..|..+ .......+.+.. .+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9887765443 3432 1 1 123333 122223333322 2379999999982
Q ss_pred -HHHHHHHHHHhcc---CCceEEEEccC
Q 017431 267 -VSVMRAALECCHK---GWGTSVIVGVA 290 (371)
Q Consensus 267 -~~~~~~~~~~l~~---~~G~iv~~g~~ 290 (371)
..+++.+++.+.+ + |+++.+++.
T Consensus 533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1234555666655 4 889998774
No 143
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.72 E-value=0.0003 Score=67.51 Aligned_cols=101 Identities=23% Similarity=0.320 Sum_probs=75.9
Q ss_pred hhhhhcC-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcC
Q 017431 176 GAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 176 ~~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
.++.+.. ..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+.. . .+.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell----- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV----- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----
Confidence 3444433 34689999999999999999999999999 8999988877665555556531 1 122222
Q ss_pred CCccEEEEccCCHHHHH-HHHHHhccCCceEEEEccCC
Q 017431 255 GGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+|+++.++|..+.+. ..++.|+++ +.++.+|...
T Consensus 308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 15999999999877764 899999997 9999998753
No 144
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.66 E-value=0.00019 Score=57.64 Aligned_cols=75 Identities=25% Similarity=0.342 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCc--EEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
-+++++||+|+|++|.+++..+...|+++|+.+.|+.+|.+. +++++.. ..+...+ +.+.+ ..+|+++
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence 357999999999999999999999999889999999887664 4556332 2333322 11111 1599999
Q ss_pred EccCCHH
Q 017431 262 ECIGNVS 268 (371)
Q Consensus 262 d~~g~~~ 268 (371)
+|++.+.
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9988753
No 145
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.65 E-value=0.00073 Score=61.54 Aligned_cols=94 Identities=20% Similarity=0.267 Sum_probs=69.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|++|+|+|.|.+|.+.+..++.+|+ +|+++++++++.+.+.++|... +.. .++ .+.. .++|+++++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~----~~l----~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL----NKL----EEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH----HHH----HHHh-ccCCEEEECCC
Confidence 57899999999999999999999999 8999999888777776666532 111 112 2221 26999999997
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..-.-...++.++++ ..++.++...
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 643335567778886 8888887744
No 146
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.62 E-value=0.00021 Score=60.80 Aligned_cols=109 Identities=21% Similarity=0.225 Sum_probs=78.7
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhcCCcEE-ecCCC
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNFGVTEF-VNPKD 240 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~----~~~~~~~~g~~~v-i~~~~ 240 (371)
.+.-+...|. +.....++++++||=+|+| .|..++-+|+..+ +|+.+++.++ ..+.++.+|...+ +...+
T Consensus 54 tis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD 128 (209)
T COG2518 54 TISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD 128 (209)
T ss_pred eecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence 3433444443 4577889999999999997 6899999999888 8999999887 3344566887553 22333
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. ...+... .||.|+-+.+-+..-+.+++.|+++ |++|..
T Consensus 129 G-------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 129 G-------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred c-------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 1 1223333 8999998888877678899999997 998765
No 147
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.53 E-value=0.00049 Score=62.86 Aligned_cols=96 Identities=24% Similarity=0.294 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcE-EecCCCCCchHHHHHHhhcCCCcc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +... +..... + ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----cccccCCCce
Confidence 45789999999986 877777765 5777999999999877666542 2211 110100 0 1112234899
Q ss_pred EEEEccCCH---HHHHHHHHHhccCCceEEEEcc
Q 017431 259 YSFECIGNV---SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 259 vvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+|+...... .++..+.+.|+++ |.++..|.
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi 260 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGI 260 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence 998654432 3567778999997 99987765
No 148
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.52 E-value=0.00051 Score=59.68 Aligned_cols=79 Identities=18% Similarity=0.305 Sum_probs=59.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC----cEEecCCCCCchHHHHHHhhcCC--Cc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTDG--GV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~----~~vi~~~~~~~~~~~~~~~~~~g--g~ 257 (371)
+++.++|+|| +++|.+.++.....|+ +|+.+.|..++++.+ .+++. ...+|..+ .......+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578999999 8999999999999999 999999999988755 56772 22455554 13344445544444 69
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+.++..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998885
No 149
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.52 E-value=9.8e-05 Score=74.09 Aligned_cols=80 Identities=26% Similarity=0.361 Sum_probs=58.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHhcCCcEEecCCC-
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD- 240 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~---------------------~~~~~~~~~~g~~~vi~~~~- 240 (371)
...+|++|+|+|+|+.|+++++.++.+|+ +|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 34567778899876665422
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
.+... +.+ ..++|++|.++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 11111 111 126999999999853
No 150
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.47 E-value=0.00021 Score=68.92 Aligned_cols=159 Identities=18% Similarity=0.204 Sum_probs=94.8
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCC
Q 017431 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 138 (371)
Q Consensus 59 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 138 (371)
-|+|+++-+.+|++...+.-+|+.- . |+.|. +.+..|..... .|.. .++
T Consensus 92 ~g~ea~~hl~~V~~GldS~V~GE~q-----I-lgQvk----~a~~~a~~~g~---~g~~-l~~----------------- 140 (423)
T PRK00045 92 EGEEAVRHLFRVASGLDSMVLGEPQ-----I-LGQVK----DAYALAQEAGT---VGTI-LNR----------------- 140 (423)
T ss_pred CCHHHHHHHHHHHhhhhhhhcCChH-----H-HHHHH----HHHHHHHHcCC---chHH-HHH-----------------
Confidence 4999999999999988775555533 2 44443 12222221111 1110 112
Q ss_pred cceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcC---CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 017431 139 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVI 215 (371)
Q Consensus 139 g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~ 215 (371)
.|+..+ ++|..+..+.+. ...+...++.++.... +-.++++|+|+|+|.+|.++++.++..|+.+|+
T Consensus 141 -lf~~a~--------~~~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~ 210 (423)
T PRK00045 141 -LFQKAF--------SVAKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT 210 (423)
T ss_pred -HHHHHH--------HHHhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence 444433 334433322222 2224455555542221 235789999999999999999999999988899
Q ss_pred EEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 216 GIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 216 ~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+++++.++.+ +++++|.. ++.. .+..+.+ .++|+||+|++.++
T Consensus 211 v~~r~~~ra~~la~~~g~~-~~~~----~~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 211 VANRTLERAEELAEEFGGE-AIPL----DELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEeCCHHHHHHHHHHcCCc-EeeH----HHHHHHh-----ccCCEEEECCCCCC
Confidence 9999887754 77778753 3221 1121111 26999999999754
No 151
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0055 Score=55.43 Aligned_cols=77 Identities=23% Similarity=0.370 Sum_probs=53.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEEEEc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvvid~ 263 (371)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ .....+.+..... +++|+++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899988 9999999999989999 89999888877766655554332 34433 1233333333322 379999999
Q ss_pred cCC
Q 017431 264 IGN 266 (371)
Q Consensus 264 ~g~ 266 (371)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.20 E-value=0.0062 Score=53.67 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=66.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCcEEe--cCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g~~~vi--~~~~~~~~~~~~~~~~~~--gg 256 (371)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+ |..+ .....+.+.+... ++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4689999988 9999999999999999 899998988766544 222 222222 2222 1222222322221 36
Q ss_pred ccEEEEccCCH-----------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 257 VDYSFECIGNV-----------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 257 ~dvvid~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|.++++.+.. ..++..++.+.++ |+++.+++.
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 89999888741 1245566667775 899988764
No 153
>PRK06182 short chain dehydrogenase; Validated
Probab=97.19 E-value=0.0049 Score=55.74 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~dvvi 261 (371)
++++++|+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+...+.+.. .+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999988 9999999999888999 89999888887665554454332 34333 123333333322 23799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 98874
No 154
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.05 E-value=0.0068 Score=52.11 Aligned_cols=101 Identities=27% Similarity=0.437 Sum_probs=69.0
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCC-cEEecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGV-TEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~-~~vi~~~~~~~~~~~~~~~~~ 253 (371)
...++.++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ +++. +.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc-
Confidence 456788999999999987 8999999988753 48999999998777654 4552 2221111 1122222222
Q ss_pred CCCccEEEEccCC---HHHHHHHHHHhccCCceEEE
Q 017431 254 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 254 ~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~ 286 (371)
.+.+|.||...+. ...++.+.+.|+++ |+++.
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~ 143 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVI 143 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEE
Confidence 2379999975443 45688888999997 99885
No 155
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.05 E-value=0.0065 Score=51.55 Aligned_cols=80 Identities=18% Similarity=0.236 Sum_probs=59.4
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE-EecCCCC--CchHHHHHHhhcCCCccE
Q 017431 186 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDH--DKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga--g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-vi~~~~~--~~~~~~~~~~~~~gg~dv 259 (371)
..+.|||+|+ |++|.+...-....|+ .|+++.+.-++...+. ++|... -+|..+. -..+..+++..++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4578999965 8999999988889999 9999999998887665 777633 2343331 123455666667779999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997775
No 156
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.01 E-value=0.011 Score=50.32 Aligned_cols=101 Identities=21% Similarity=0.249 Sum_probs=63.0
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCC-Ccc
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDG-GVD 258 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~g-g~d 258 (371)
...+++|++||.+|+|+-+.+.....+..+..+|++++.++.+ ...++..+ .+..+ ....+.+.+..+. ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~--~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD--EEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC--hhHHHHHHHHhCCCCcc
Confidence 4567899999999987655544444444444489999998864 11233211 12222 2333445554555 899
Q ss_pred EEEE-cc----CC------------HHHHHHHHHHhccCCceEEEEc
Q 017431 259 YSFE-CI----GN------------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 259 vvid-~~----g~------------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+|+. .. |. ..+++.+.++|+++ |+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 9995 22 21 34678889999997 9988753
No 157
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.01 E-value=0.0064 Score=54.67 Aligned_cols=111 Identities=21% Similarity=0.321 Sum_probs=68.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E----ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F----VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v----i~~~~~~~~~~~~~~~~~-- 253 (371)
.|+.|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++.+ ++.+..+ + .|-.+ ..+....+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence 4689999999 8999987777777799 666666777666555 3444433 2 22222 122222222221
Q ss_pred CCCccEEEEccCCH-------------------------HHHHHHHHHhccCC-ceEEEEccCCCCCcccc
Q 017431 254 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGW-GTSVIVGVAASGQEIST 298 (371)
Q Consensus 254 ~gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~ 298 (371)
-|++|+.+|..|-. ...+.++..|.+.. |+||.+++......+++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 24899999977741 23566777776533 99999987654443333
No 158
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.99 E-value=0.0044 Score=52.34 Aligned_cols=92 Identities=30% Similarity=0.376 Sum_probs=62.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.--.|++|.|+|.|.+|...++.++.+|+ +|++.++.........+.+.. . .++.+.+.+ .|+|+.
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~----~----~~l~ell~~-----aDiv~~ 97 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE----Y----VSLDELLAQ-----ADIVSL 97 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE----E----SSHHHHHHH------SEEEE
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce----e----eehhhhcch-----hhhhhh
Confidence 34568999999999999999999999999 999999988866644555542 1 223333333 888888
Q ss_pred ccCC-H---H-HHHHHHHHhccCCceEEEEcc
Q 017431 263 CIGN-V---S-VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 263 ~~g~-~---~-~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+... + . .-...++.|+++ ..+|.++.
T Consensus 98 ~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 98 HLPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp -SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hhccccccceeeeeeeeeccccc-eEEEeccc
Confidence 7663 1 1 135667778885 77776643
No 159
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.96 E-value=0.0083 Score=55.48 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=70.7
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
.....++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--
Confidence 345568899999999997 59999999998864 36999999988655544 46664432211 111111111
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.+|+|+.+.+-++.....++.|+++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999888766677888999997 998764
No 160
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0076 Score=54.66 Aligned_cols=79 Identities=16% Similarity=0.243 Sum_probs=55.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHh---hcCCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVD---LTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~---~~~gg~dvv 260 (371)
.+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ .......+.+ ...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 3578999988 9999999998888999 89999998888776666555433 34433 1222222332 233479999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 161
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.94 E-value=0.0059 Score=55.26 Aligned_cols=129 Identities=25% Similarity=0.327 Sum_probs=74.1
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhh-cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
..+.++.+.+.+ .......|++. |.. ...+++|.+||=+|+| .|.++|..++ +|+.+|++++.++-..+.++
T Consensus 130 ~~~i~lDPGlAF----GTG~HpTT~lc-L~~Le~~~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 130 ELNIELDPGLAF----GTGTHPTTSLC-LEALEKLLKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred ceEEEEcccccc----CCCCChhHHHH-HHHHHHhhcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHHHH
Confidence 455666555533 23333444433 222 2235689999888885 4666665544 58889999999986555444
Q ss_pred ----hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc-CC--HHHHHHHHHHhccCCceEEEEccCC
Q 017431 229 ----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI-GN--VSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 229 ----~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~-g~--~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+..... ... .........++.||+|+... -. ..+.+...+.++++ |+++.-|...
T Consensus 203 eNa~~N~v~~~~-~~~----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 203 ENARLNGVELLV-QAK----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred HHHHHcCCchhh-hcc----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 33443211 000 11112222234899999533 22 13467778889997 9999888753
No 162
>PRK04148 hypothetical protein; Provisional
Probab=96.94 E-value=0.0042 Score=49.32 Aligned_cols=86 Identities=23% Similarity=0.322 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.++.+++++|.| .|...+..+..+|. .|++++.+++..+.+++.+...+.+--. +.+. .+. +++|+++.+-
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~--~~y----~~a~liysir 85 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL--EIY----KNAKLIYSIR 85 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH--HHH----hcCCEEEEeC
Confidence 456789999999 88755555557898 9999999999999998888755443211 1111 111 2799999988
Q ss_pred CCHHHHHHHHHHhcc
Q 017431 265 GNVSVMRAALECCHK 279 (371)
Q Consensus 265 g~~~~~~~~~~~l~~ 279 (371)
..++..+.+++.-++
T Consensus 86 pp~el~~~~~~la~~ 100 (134)
T PRK04148 86 PPRDLQPFILELAKK 100 (134)
T ss_pred CCHHHHHHHHHHHHH
Confidence 888866555554444
No 163
>PRK12742 oxidoreductase; Provisional
Probab=96.93 E-value=0.019 Score=50.50 Aligned_cols=101 Identities=22% Similarity=0.259 Sum_probs=62.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
++++|||+|+ |.+|.+.++.+...|+ +|+.+.+ ++++.+ +..+++...+ .|..+ ...+.+.+.+ .+++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999988 9999999999999999 6766644 444433 3345565432 23322 1222233322 13699999
Q ss_pred EccCCHH-------------------------HHHHHHHHhccCCceEEEEccCC
Q 017431 262 ECIGNVS-------------------------VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 262 d~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
++.|... +...++..+..+ |+++.+++..
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 9887410 113444556665 8999887643
No 164
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.93 E-value=0.0045 Score=58.88 Aligned_cols=106 Identities=20% Similarity=0.263 Sum_probs=72.9
Q ss_pred hhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhh
Q 017431 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 173 ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 252 (371)
..+..+.+..++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++ .+.
T Consensus 154 ~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l 225 (383)
T PRK11705 154 AKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL 225 (383)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc
Confidence 334445677788999999999985 67778888988898 8999999999998887643211111111 112 111
Q ss_pred cCCCccEEEEc-----cCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 253 TDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 253 ~~gg~dvvid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+.||.|+.. ++. +..++.+.+.|+++ |.++...
T Consensus 226 -~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 226 -NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 2479988753 333 35688889999997 9988754
No 165
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.84 E-value=0.01 Score=48.63 Aligned_cols=94 Identities=26% Similarity=0.335 Sum_probs=59.8
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
...-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+.--|.. +. ...+.+ ...|+++
T Consensus 18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~v 83 (162)
T PF00670_consen 18 NLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFV 83 (162)
T ss_dssp -S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEE
T ss_pred ceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEE
Confidence 345678999999999999999999999999 999999998766555545542 21 122222 2589999
Q ss_pred EccCCHHH-HHHHHHHhccCCceEEEEccC
Q 017431 262 ECIGNVSV-MRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 262 d~~g~~~~-~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.++|..+. -.+-++.|+++ ..+...|.+
T Consensus 84 taTG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 84 TATGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp E-SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred ECCCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 99998664 35778888885 555555553
No 166
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.016 Score=50.99 Aligned_cols=79 Identities=23% Similarity=0.347 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC---CcEEe--cCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VTEFV--NPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g---~~~vi--~~~~~~~~~~~~~~~~~~--gg 256 (371)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++. ..+.+ |..+ ...+.+.+.+... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4688999988 9999999888888899 799998887665433 3332 11222 2222 1233333333322 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 167
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.80 E-value=0.0033 Score=52.51 Aligned_cols=102 Identities=22% Similarity=0.238 Sum_probs=66.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec-CCCC--------------CchHHHHHHh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDH--------------DKPIQQVLVD 251 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~-~~~~--------------~~~~~~~~~~ 251 (371)
..+|+|+|+|.+|..|+.+++.+|+ +|+..+...++.+..+..+...+.. ..+. ...+...+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4789999999999999999999999 8999999988888888777754322 1111 1223333333
Q ss_pred hcCCCccEEEEccC-----CHH-HHHHHHHHhccCCceEEEEccCC
Q 017431 252 LTDGGVDYSFECIG-----NVS-VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 252 ~~~gg~dvvid~~g-----~~~-~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
... .+|+++.+.- .|. ..+..++.|+++ ..+++++...
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~ 142 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ 142 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence 221 4898885322 122 246777888986 8899887643
No 168
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.78 E-value=0.02 Score=47.85 Aligned_cols=103 Identities=27% Similarity=0.346 Sum_probs=69.3
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
...++++|+.++=+|+| .|-.+++++...-..+|+++++++++.++.+ +||.+.+..... +..+.+.++.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCCC--
Confidence 56678999977667885 3556677775554559999999999877664 588765432222 1222233221
Q ss_pred CccEEEEccCC--HHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+|.+|---|. +..++.+++.|+++ |++|.-..
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 59999853332 45689999999997 99986644
No 169
>PRK14967 putative methyltransferase; Provisional
Probab=96.75 E-value=0.056 Score=47.34 Aligned_cols=97 Identities=23% Similarity=0.221 Sum_probs=63.0
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcCCC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG 256 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~gg 256 (371)
...+.++++||-.|+|. |..++.+++. ++.+|++++.+++..+.+++ .+....+... ++.+. ...+.
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~---~~~~~ 101 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARA---VEFRP 101 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhh---ccCCC
Confidence 34567889999999986 8888888875 65689999999987765543 3432222221 22221 12237
Q ss_pred ccEEEEccCC---------------------------HHHHHHHHHHhccCCceEEEE
Q 017431 257 VDYSFECIGN---------------------------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 257 ~dvvid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
||+|+...+- ...+..+.+.|+++ |+++.+
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 9999864210 12356678889997 998865
No 170
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.72 E-value=0.012 Score=49.05 Aligned_cols=96 Identities=18% Similarity=0.203 Sum_probs=63.9
Q ss_pred hhccccchhhhhhhhhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 165 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 165 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
...|+....+...+.....--.|++|||+|+|. +|..++..++..|+ +|+++.+..+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 444544444444444444456889999999986 59989999999999 7887765421
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+..+.+. .+|+||.+++.++.+.. +.+.++ -.+++++..
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 1112222 49999999999774333 346664 677777664
No 171
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.024 Score=49.74 Aligned_cols=79 Identities=23% Similarity=0.256 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHH---hcCCcEE-ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAK---NFGVTEF-VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~---~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.. .+. ..+...+ .|..+ ..+....+.+... +++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999988 9999999998888899 7999988765432 222 2233221 22222 1222222332221 379
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.+.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998764
No 172
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.71 E-value=0.0069 Score=58.04 Aligned_cols=76 Identities=13% Similarity=0.123 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-++.+|||+|+|.+|.+++..+...|+..++++.++.++.+ ++.+++...++. +. .+.+.. ..+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~-~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LS-ELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HH-HHHHHh-ccCCEEEEC
Confidence 46789999999999999999999999888999999877654 555565222222 11 112211 259999999
Q ss_pred cCCHHH
Q 017431 264 IGNVSV 269 (371)
Q Consensus 264 ~g~~~~ 269 (371)
++.++.
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998653
No 173
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.018 Score=52.77 Aligned_cols=79 Identities=23% Similarity=0.381 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCC--cEE---ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGV--TEF---VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~--~~v---i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+. .++++. ... .|..+ ..+..+.+.+... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999999999 89989888876553 344542 111 33333 1222233333222 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 174
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.71 E-value=0.074 Score=48.57 Aligned_cols=138 Identities=17% Similarity=0.121 Sum_probs=85.3
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcC---CCCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV 214 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~v 214 (371)
.|-+|.++..+..+.- ......+..-| .+.|.|. |.+.. ..-..+.|+|.+| +-.++.....++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4556666665543311 11112222223 4455554 22211 2234467788877 788888888777 5555589
Q ss_pred EEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 215 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 215 ~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+++... ..+.+.+|. +.++.|++ +..+....--+++|+.|+..+...+.+.+....-..+.+|..
T Consensus 166 vglTS~~N-~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 166 VGLTSARN-VAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred EEEecCcc-hhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 99966554 568888997 55776655 444444466789999999998888888888753456667764
No 175
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.71 E-value=0.014 Score=52.05 Aligned_cols=80 Identities=18% Similarity=0.292 Sum_probs=54.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCcE-E--ecCCCCCchHHHHHHhhcC-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE-F--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~~-v--i~~~~~~~~~~~~~~~~~~- 254 (371)
..+.++||+|| +++|...+..+-..|+ +++.+.|+++|++.+. ++ +..- + +|..+ ..+......++..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence 46789999999 8999998888888899 9999999999887553 33 2221 2 33333 1222222222222
Q ss_pred C-CccEEEEccCC
Q 017431 255 G-GVDYSFECIGN 266 (371)
Q Consensus 255 g-g~dvvid~~g~ 266 (371)
+ .+|+.+|++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 2 79999999986
No 176
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.67 E-value=0.014 Score=44.32 Aligned_cols=92 Identities=24% Similarity=0.259 Sum_probs=60.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|++|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-... ... +. ..+ .++++|+.+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~~----~~---~~l--~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RRE----FE---EDL--DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ESS-----G---GGC--TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hhh----HH---HHH--hhheEEEecCC
Confidence 57899999999999999999999999 888887764 2122 111111 111 21 011 27999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCCCC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAASGQ 294 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~ 294 (371)
.+..-+...+..+.. |.++...+.....
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~ 97 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELC 97 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCC
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCC
Confidence 988667777767764 9998886654333
No 177
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.66 E-value=0.021 Score=48.12 Aligned_cols=92 Identities=25% Similarity=0.306 Sum_probs=62.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccCC-
Q 017431 190 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN- 266 (371)
Q Consensus 190 VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~- 266 (371)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+. ..++..+ .+..+ . +.+.+... ++|.+|+++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d--~---~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD--P---DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC--H---HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh--h---hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999987766 4444333 22222 2 22333222 69999999984
Q ss_pred ---HHHHHHHHHHhccC-CceEEEEccC
Q 017431 267 ---VSVMRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 267 ---~~~~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
.......++.+... -.+++.++..
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccccccccceeeecc
Confidence 23456666666542 1377777654
No 178
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.66 E-value=0.025 Score=55.19 Aligned_cols=79 Identities=24% Similarity=0.349 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh---HHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK---FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~---~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
.+++++||+|+ |++|.+.++.+...|+ +|+++++.+.. .++..+++...+ .|..+ .......+.... .+++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCC
Confidence 35789999988 9999999999999999 78888764322 233344554322 34433 122222222222 2379
Q ss_pred cEEEEccC
Q 017431 258 DYSFECIG 265 (371)
Q Consensus 258 dvvid~~g 265 (371)
|++|++.|
T Consensus 286 d~vi~~AG 293 (450)
T PRK08261 286 DIVVHNAG 293 (450)
T ss_pred CEEEECCC
Confidence 99999988
No 179
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.65 E-value=0.021 Score=49.40 Aligned_cols=105 Identities=23% Similarity=0.238 Sum_probs=72.3
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcEEe-cCCCCCchHHHHHHhhcC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFV-NPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~vi-~~~~~~~~~~~~~~~~~~ 254 (371)
..+....++||=+|++ +|..++++|..+. -.+++.++.++++.+.+++ .|....+ -... .+..+.+.+...
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~--gdal~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG--GDALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec--CcHHHHHHhccC
Confidence 4455577888888774 6888889999887 3489999999998877754 5665521 1111 245555555334
Q ss_pred CCccEEE-EccC--CHHHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSF-ECIG--NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvi-d~~g--~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|| |+.- -+..++.+++.|++| |.+|.=..
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNv 167 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNV 167 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeec
Confidence 5899988 4332 367799999999996 87775433
No 180
>PRK08017 oxidoreductase; Provisional
Probab=96.63 E-value=0.014 Score=52.01 Aligned_cols=77 Identities=25% Similarity=0.359 Sum_probs=53.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHH---HHHHhhcCCCccEEEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQ---QVLVDLTDGGVDYSFE 262 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~---~~~~~~~~gg~dvvid 262 (371)
++|||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+++.+...+ .|..+. .... +.+.....+.+|.+++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDP-ESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCH-HHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999999999 89999998888877777776443 233321 1222 2233333347888888
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 181
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.028 Score=49.82 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=61.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-HH---HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD-RA---KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~~-~~---~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+++.++.+ +.+ +. +..+... . .|..+ ..+....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4679999988 9999999998888999 7888777543 222 22 2223221 1 23333 1222223332222
Q ss_pred CCccEEEEccCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFECIGNV-------------------SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+++|+++.+.+.. .+++.+.+.+..+ |++|.+++
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689988877541 2355566666665 89998865
No 182
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.63 E-value=0.011 Score=49.95 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc---EEecCCCC--CchHHHHHHhhcCCCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT---EFVNPKDH--DKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~---~vi~~~~~--~~~~~~~~~~~~~gg~dv 259 (371)
-|-+|||+|. +++|++..+-...+|= +|+.+.+++++++.+++.... .+.|..+. ...+.+.+.+..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 3679999955 8999999999999997 999999999999888764432 23343331 1113333332211 5889
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
+++++|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998874
No 183
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.027 Score=50.27 Aligned_cols=79 Identities=19% Similarity=0.208 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+..++ .+... . .|..+ .......+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 4679999988 8999998888888899 77888787766544433 33321 1 22222 1223333333222 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 184
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.62 E-value=0.0085 Score=46.82 Aligned_cols=100 Identities=23% Similarity=0.374 Sum_probs=65.9
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~~~~ 253 (371)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++ +++... ++...- . ..+ ...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~--~~~-~~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---P--EAL-EDS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---c--ccC-hhh
Confidence 444566788888899975 888888998875459999999998776654 344322 221110 0 001 111
Q ss_pred CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
...+|+|+...+. ..+++.+.+.|+++ |+++.-
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 1379999975433 34688999999997 998754
No 185
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.59 E-value=0.007 Score=55.08 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=50.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++++|||+|+|+.+.+++.-+..+|+++|+++.|+.+|.+.+ .+++....+...+ +.+.+.... ..+|+|++|+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~~~~~~~~-~~~DiVInaT 198 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GDSGGLAIE-KAAEVLVSTV 198 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----chhhhhhcc-cCCCEEEECC
Confidence 578999999999999999999999998999999998776544 4443211000000 001111111 2699999998
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
+.
T Consensus 199 p~ 200 (282)
T TIGR01809 199 PA 200 (282)
T ss_pred CC
Confidence 76
No 186
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.028 Score=50.41 Aligned_cols=79 Identities=32% Similarity=0.408 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+ +.++++... . .|..+ ..+..+.+.+... +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999988 9999999999888999 8999988876544 444555321 1 23332 1223333333221 3689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998773
No 187
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.01 Score=55.42 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
++++|||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ .....+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999999999999 899998888776433 33454332 23332 122222222211 24
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 188
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.55 E-value=0.014 Score=52.81 Aligned_cols=101 Identities=24% Similarity=0.347 Sum_probs=63.5
Q ss_pred hhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHH
Q 017431 177 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLV 250 (371)
Q Consensus 177 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~ 250 (371)
.+.+..++++|++||-+|+| -|-.++.+|+..|+ +|++++.++++.+.++ +.|... .+...+ + +
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~ 122 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----R 122 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----G
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----c
Confidence 35688899999999999987 67777788888899 9999999999887764 455421 121111 1 1
Q ss_pred hhcCCCccEEEE-----ccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 251 DLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 251 ~~~~gg~dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.. +.||.|+. .+|. +..++.+.+.|+++ |+++.-..
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 221 27998876 3432 35689999999997 99875543
No 189
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.04 Score=49.51 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.. .+.+... . .|..+ .......+.+... +
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999998889999 899998877654322 2223221 1 23332 1223333333322 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|+++++.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998875
No 190
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.54 E-value=0.029 Score=49.69 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC--Cc-EE--ecCCCCCchHHHHHHhhc--CCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VT-EF--VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g--~~-~v--i~~~~~~~~~~~~~~~~~--~gg 256 (371)
+++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .++. .. .. .|..+ ...+...+.+.. .+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4679999988 9999999988888899 799999988765443 2322 11 11 22222 123333333221 137
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 191
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.52 E-value=0.0039 Score=53.96 Aligned_cols=101 Identities=24% Similarity=0.312 Sum_probs=65.4
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHH----HHhcCCcEE-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDR----AKNFGVTEF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~----~~~~g~~~v-i~~~~~~~~~~~~~~~ 251 (371)
+.....+++|++||-+|+| .|..+.-+++..|.. +|+.++..++-.+. +++++...+ +...+ . ...
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g-----~~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--G-----SEG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---G-----GGT
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--h-----hhc
Confidence 4566779999999999886 577777888877743 69999988864443 344566432 22222 1 111
Q ss_pred hcC-CCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 252 LTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 252 ~~~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
... +.||.|+-+.+-+..-...++.|+++ |++|..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 112 38999998877767678899999997 999874
No 192
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.52 E-value=0.031 Score=52.67 Aligned_cols=96 Identities=23% Similarity=0.218 Sum_probs=65.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC---Cc-EEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g---~~-~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.+|||+|+|.+|..+++.+-+.|-.+|++++++.++.+.+.... .. ..+|..+ .+++.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-----~~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-----VDALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-----hHHHHHHHh-cCCEEEEe
Confidence 57999999999999999988888559999999999888876654 21 2344443 223333332 36999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.......+-.|+..+ =.++....+
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 99865454444555553 456665544
No 193
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.51 E-value=0.0071 Score=52.62 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=67.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~ 250 (371)
+.....++++++||-+|+| .|..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+. ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC-----
Confidence 3456678899999999886 46677777777763 389999999887665543 44422 221111 0001
Q ss_pred hhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 251 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
...+.||+|+-....+...+..++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 11237999986655556678889999997 998765
No 194
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.019 Score=50.26 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=50.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE--ecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+++++.... .|..+ .....+.+.....+++|+++.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 57899988 9999998888888899 89999888876655554432222 23322 12233333333334799999887
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 54
No 195
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.034 Score=52.01 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.|.... .|..+ .......+.+... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4679999988 9999999999988999 888888887765433 23454322 23333 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 196
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.018 Score=51.44 Aligned_cols=79 Identities=28% Similarity=0.411 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+|++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.. .+++...+ .|..+ .......+.+... +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999988 9999999999999999 888888887665433 44543222 23333 1222223332221 368999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998764
No 197
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.025 Score=49.98 Aligned_cols=77 Identities=25% Similarity=0.357 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
++++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+ ++.+...+ .|..+ ......+.+. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~-~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD--DAAIRAALAA-AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC--HHHHHHHHHH-hCCCCEEEE
Confidence 4679999988 8999999999999999 789898887766544 34444322 23333 2221222221 237999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
No 198
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.45 E-value=0.025 Score=51.57 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=37.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
..+++|+|+|+|++|.+++..+...|+++|++++++.+|.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3568999999999999999999999998999999998876644
No 199
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.45 E-value=0.034 Score=48.80 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=62.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHhcCCcEEecCCCCCchHHHHH
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVL 249 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~--~v~~v~~~----~~~--------~~~~~~~g~~~vi~~~~~~~~~~~~~ 249 (371)
--++++|+|+|+|..|.+.+..+...|++ +++.++++ .++ .+++++++... . + .++.+.+
T Consensus 22 ~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~--~~l~~~l 95 (226)
T cd05311 22 KIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G--GTLKEAL 95 (226)
T ss_pred CccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c--CCHHHHH
Confidence 35678999999999999999988899998 89999998 443 33445543211 0 1 1233333
Q ss_pred HhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEc
Q 017431 250 VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 250 ~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
. ++|+++++++..-.-...++.|.+. ..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 1 4899999997422224667777774 6665554
No 200
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.44 E-value=0.022 Score=43.66 Aligned_cols=91 Identities=26% Similarity=0.314 Sum_probs=60.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHhcC----C-cE-EecCCCCCchHHHHHHhhcCC-Cc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAKNFG----V-TE-FVNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~-~~g~~~v~~v~~~~~~~~~~~~~g----~-~~-vi~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
|+++||-+|+| .|..++.+++ ..++ +|++++.+++..+.+++.- . +. .+...+ + . ...... +|
T Consensus 1 p~~~vLDlGcG-~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d----~-~--~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCG-TGRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD----A-E--FDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTT-TSHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC----C-H--GGTTTSSCE
T ss_pred CCCEEEEEcCc-CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc----c-c--cCcccCCCC
Confidence 68899999886 3777778887 4677 8999999998877776432 2 11 222222 2 0 112222 79
Q ss_pred cEEEEcc-CC---H------HHHHHHHHHhccCCceEEE
Q 017431 258 DYSFECI-GN---V------SVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 258 dvvid~~-g~---~------~~~~~~~~~l~~~~G~iv~ 286 (371)
|+|+... .. . ..++.+.+.|+++ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999866 21 1 2378899999997 99875
No 201
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.41 E-value=0.069 Score=52.97 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=38.8
Q ss_pred hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017431 180 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~ 226 (371)
...+.+.|++|||+|+ |.+|.+.++.+...|+ +|+++.++.++.+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 4556778999999988 9999999999988999 88888888877653
No 202
>PRK00811 spermidine synthase; Provisional
Probab=96.38 E-value=0.021 Score=51.95 Aligned_cols=96 Identities=13% Similarity=0.134 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------cEE-ecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEF-VNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~---------~~v-i~~~~~~~~~~~~~~~~~~g 255 (371)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-. ..+ +.. .+....+.+ ..+
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~----~Da~~~l~~-~~~ 149 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI----GDGIKFVAE-TEN 149 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE----CchHHHHhh-CCC
Confidence 457999998864 6667777777777799999999998888776321 111 111 222233333 334
Q ss_pred CccEEEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+|+|+.-... .+.++.+.+.|+++ |.++...
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 89999853321 34467888999997 9988753
No 203
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.35 E-value=0.027 Score=50.90 Aligned_cols=95 Identities=17% Similarity=0.197 Sum_probs=65.8
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+....+..+....---.|++|+|+|.|. +|.-+..++...|+ .|+.+.+.. .+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~~ 194 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------KD 194 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hh
Confidence 45555554444443333245799999999965 99999999999999 787775431 11
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+.++ .+|++|.++|.++.+.. +.++++ ..+|.+|..
T Consensus 195 l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 195 MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 222222 49999999999876555 458886 888888874
No 204
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.32 E-value=0.024 Score=49.05 Aligned_cols=100 Identities=21% Similarity=0.195 Sum_probs=65.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcCCc---EEecCCCCCchHHHHHH
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVT---EFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~~~~ 250 (371)
.....++++++||=+|+| .|..+..+++..+ ..+|++++.+++-.+.++ +.+.. .++. .+ ..+.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~-~d----~~~~~~ 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYH-GD----GKRGLE 138 (205)
T ss_pred HHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE-CC----cccCCc
Confidence 455677899999999886 4667777777765 238999999987655544 34432 2222 11 111110
Q ss_pred hhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 251 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
..+.||+|+-+.......+.+++.|+++ |+++..
T Consensus 139 --~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 --KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999997766556678888999997 998764
No 205
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.058 Score=47.73 Aligned_cols=79 Identities=24% Similarity=0.198 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+... + .|..+ .......+.+... +
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999998888999 788888877654432 2233222 2 23332 1122222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 206
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.32 E-value=0.025 Score=55.75 Aligned_cols=73 Identities=29% Similarity=0.315 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+.++++|+|+|.|..|++++++++..|+ +|++.+..+++.+.++++|+.. +.... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc----hHhHh-----hcCCEEEEC
Confidence 4578999999999999999999999999 8999987766666667778743 22111 11112 147999998
Q ss_pred cCCH
Q 017431 264 IGNV 267 (371)
Q Consensus 264 ~g~~ 267 (371)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8864
No 207
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.30 E-value=0.17 Score=43.75 Aligned_cols=93 Identities=22% Similarity=0.175 Sum_probs=60.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.|++|||+|+|.+|..-++.+...|+ +|++++.... ..+.+.+.|--..+ ..++.. . .+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~~----~--dl--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFDA----D--IL--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCCH----H--Hh--CCcEEEEECC
Confidence 46899999999999999999999999 8888865433 22223333321222 222111 1 11 2699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.+..-.......... |.+|...+
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECC
Confidence 9976556666666664 88776544
No 208
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.066 Score=47.35 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEE---ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+ ..++++.... .|..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999988 9999999999999999 8999988776544 3345554321 22222 112222222221 13799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 209
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.29 E-value=0.012 Score=53.20 Aligned_cols=74 Identities=24% Similarity=0.269 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE-ecCCCCCchHHHHHHhhcCC-CccEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDG-GVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v-i~~~~~~~~~~~~~~~~~~g-g~dvvi 261 (371)
.+++++||+|||+.+.+++.-+...|+.+++++.|+.+|.+.+. .++.... +.... ....... .+|+++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~--------~~~~~~~~~~dliI 195 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA--------LADLEGLEEADLLI 195 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc--------ccccccccccCEEE
Confidence 35799999999999999999999999889999999888866554 3432110 00000 0111111 489999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
|+++-
T Consensus 196 NaTp~ 200 (283)
T COG0169 196 NATPV 200 (283)
T ss_pred ECCCC
Confidence 98875
No 210
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.25 E-value=0.016 Score=52.76 Aligned_cols=96 Identities=29% Similarity=0.442 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE-EecCCCCCchHHHHHHhhcCCCcc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
..+|++||=+|+| .|++++..++ +|+++|++++.++...+.+++ .|... +..... . +...+.||
T Consensus 159 ~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~--~-------~~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS--E-------DLVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT--S-------CTCCS-EE
T ss_pred ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe--c-------ccccccCC
Confidence 5778899888774 3444444444 599899999999976555543 33321 111111 0 11124799
Q ss_pred EEEEccCCHH---HHHHHHHHhccCCceEEEEccCC
Q 017431 259 YSFECIGNVS---VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 259 vvid~~g~~~---~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+|+-..-... ......+.++++ |.++.-|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 9996555432 345556678896 9999888754
No 211
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.23 E-value=0.023 Score=53.82 Aligned_cols=95 Identities=17% Similarity=0.149 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-++++|||+|||-+|..++..+...|+.+|+.+.+..+|.+ +++++|+. ++..++ ....+. .+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhhh-----hCCEEEEe
Confidence 57889999999999999999999999889999988888765 67789853 222221 112221 59999999
Q ss_pred cCCHHH---HHHHHHHhccCCc-eEEEEcc
Q 017431 264 IGNVSV---MRAALECCHKGWG-TSVIVGV 289 (371)
Q Consensus 264 ~g~~~~---~~~~~~~l~~~~G-~iv~~g~ 289 (371)
++.++- -......+..... -+++++.
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 988542 2333344443213 3455544
No 212
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.20 E-value=0.043 Score=47.33 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|+|+|+|++|...++.+..+|.++++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999876
No 213
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.083 Score=47.18 Aligned_cols=77 Identities=23% Similarity=0.259 Sum_probs=50.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcC-Cc-E--EecCCCCCchHHHHHHhhc---CCCcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG-VT-E--FVNPKDHDKPIQQVLVDLT---DGGVD 258 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g-~~-~--vi~~~~~~~~~~~~~~~~~---~gg~d 258 (371)
+++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+. .++ .. + ..|..+ .....+.+.+.. .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57999988 9999999998888899 8999888887665443 332 11 1 233333 122333333221 34799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99998875
No 214
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.025 Score=50.32 Aligned_cols=79 Identities=23% Similarity=0.272 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... . .|..+ .......+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999988 9999998888888999 8999988877655554443211 1 23222 1222222222221 3699
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 215
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.18 E-value=0.16 Score=43.79 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=56.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-h-HHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.|++|||+|+|.+|...+..+...|+ +|++++.... . .+++.+ +. ..+.... +.+. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKE----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecC----CChh--hc--CCceEEEEc
Confidence 57899999999999999988888998 7888865432 1 222222 21 1111111 1110 01 269999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++.++ ++..+...... +.++...+
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 99977 55555545554 66666644
No 216
>PRK06128 oxidoreductase; Provisional
Probab=96.18 E-value=0.061 Score=49.38 Aligned_cols=102 Identities=19% Similarity=0.196 Sum_probs=61.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh------HHHHHhcCCcEE---ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK------FDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~------~~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~-- 253 (371)
.++++||+|+ |++|.+.+..+...|+ +|+.+.++.+. .+.+++.+.... .|..+ .....+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999998888888899 77776554321 123334443322 22222 122222232222
Q ss_pred CCCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 254 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 254 ~gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
-+++|+++++.|.. .+++.++..|..+ |++|.+++.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 13799999988731 1234455556675 899888664
No 217
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.17 E-value=0.013 Score=57.16 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=61.2
Q ss_pred hcCCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVA----VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~Vl----I~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~ 253 (371)
...++++|+.+| |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+.+ .+++... ..+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG--ITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC--CCCHHHHHHHH
Confidence 456778888888 7765 9999999999999999 888876655533333333333 2444433 22223332221
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+...++.|.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 3466777888886 8999887643
No 218
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.041 Score=47.99 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=51.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+++||+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|..+ .......+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 47899987 9999998887778899 7888988887766666555432 233333 122333222332237999999876
Q ss_pred C
Q 017431 266 N 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 219
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.019 Score=51.60 Aligned_cols=97 Identities=20% Similarity=0.185 Sum_probs=69.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
..+|.|+|.|.+|.-|..+|.-+|+ +|+..+.+.+|++.+..+-...+ ..+.. ..++.+.+. ++|++|.++=
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st-~~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST-PSNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC-HHHHHHHhh-----hccEEEEEEE
Confidence 3467788999999999999999999 99999999999988876433332 22222 133333332 5899987532
Q ss_pred C-----H-HHHHHHHHHhccCCceEEEEccCC
Q 017431 266 N-----V-SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 266 ~-----~-~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
- | -..++..+.|.++ +.+|++....
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 1 1 2367889999997 9999997643
No 220
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.027 Score=50.22 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=51.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCC-cEE--ecCCCCCchHHHHHHhhc--C
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGV-TEF--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~---~g~-~~v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
..+++|||+|+ |.+|.+.+..+...|+ +|+++.+++++.+.+. + .+. ..+ .|..+ ..+..+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 35789999988 9999999999999999 8999988887654332 2 121 112 23322 123333333321 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+.+|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999998883
No 221
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.15 E-value=0.032 Score=50.35 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=50.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
+...+++++|+|+|+.+.+++.-+..+|+.+|+++.++.++.+.+ +.++.. +...+ ....+|+++
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 344567999999999999999999999998899999998876644 344321 10111 112589999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+|++-
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99863
No 222
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.034 Score=49.84 Aligned_cols=82 Identities=22% Similarity=0.336 Sum_probs=52.4
Q ss_pred CCCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----h-cCCcEE----ecCCCCCchHHHHHHh
Q 017431 183 KVEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVTEF----VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~-~g~~~v----i~~~~~~~~~~~~~~~ 251 (371)
.+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+... + ++...+ .|..+ .......+.+
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~ 90 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDA 90 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHH
Confidence 3445789999987 6 799999999999999 7888888776554332 1 443222 23322 1223333332
Q ss_pred hc--CCCccEEEEccCC
Q 017431 252 LT--DGGVDYSFECIGN 266 (371)
Q Consensus 252 ~~--~gg~dvvid~~g~ 266 (371)
.. .+++|+++++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1379999999984
No 223
>PRK00536 speE spermidine synthase; Provisional
Probab=96.13 E-value=0.023 Score=50.77 Aligned_cols=98 Identities=15% Similarity=-0.026 Sum_probs=65.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCccEEE-E
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSF-E 262 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvvi-d 262 (371)
..++|||+|+|- |.++-.++|+- ++|+.++.+++-.++++++-... .++... ......+.+...+.||+|| |
T Consensus 72 ~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR--v~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 72 ELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKN--FTHAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCC--EEEeehhhhccCCcCCEEEEc
Confidence 348999997753 55566888875 39999999999888888743211 111111 1111123333334799877 7
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++-.++..+.+.++|+++ |.+|.-+.
T Consensus 147 s~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 677778889999999997 99987654
No 224
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.023 Score=50.79 Aligned_cols=82 Identities=26% Similarity=0.268 Sum_probs=52.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCc--E--EecCCCCCchHHHHHHhhc--C
Q 017431 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT--E--FVNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~--~--vi~~~~~~~~~~~~~~~~~--~ 254 (371)
..-++.++||+|+ |.+|...+..+...|+ +|+.+.++++..+.+.+ ..-. . ..|..+ .....+.+.+.. -
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 3457789999988 9999999999999999 79999888765554433 2211 1 123322 122222222221 1
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 85 ~~~d~vi~~ag~ 96 (264)
T PRK12829 85 GGLDVLVNNAGI 96 (264)
T ss_pred CCCCEEEECCCC
Confidence 379999998875
No 225
>PLN02366 spermidine synthase
Probab=96.10 E-value=0.042 Score=50.50 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCC---CchHHHHHHhhcCCCccE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~---~~~~~~~~~~~~~gg~dv 259 (371)
...++|||+|+|. |.++..++++-+..+|++++.+++-.++++++-... .++.... ..+....+++..++.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568999998865 556678888877779999999998777777632110 0000000 022223344332347998
Q ss_pred EEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 260 SFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 260 vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
||.-... .+.++.+.++|+++ |.++..+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 8853322 24688999999997 9997653
No 226
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.028 Score=50.41 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCc-EE--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVT-EF--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~-~v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++ .+.. .+ .|..+ .....+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 8999999999888999 899998887665433 22 2322 12 23332 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 227
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.09 E-value=0.03 Score=50.24 Aligned_cols=78 Identities=21% Similarity=0.242 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ .+... . .|..+ .....+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 8999999988888999 89998888776555443 33211 1 22222 1223333333222 3689
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
+++++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
No 228
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.06 E-value=0.1 Score=45.93 Aligned_cols=79 Identities=20% Similarity=0.287 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++|||+|+ |.+|...+..+...|+ .|+++.+++++.+.+ ++.+.... .|..+ ...+.+.+.+... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3578999988 9999999999888999 689998887764432 22343222 23322 1223333333222 2
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|.+++++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998865
No 229
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.036 Score=49.98 Aligned_cols=78 Identities=28% Similarity=0.347 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC-CcE-EecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG-VTE-FVNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g-~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++ ... ..|..+ ...+.+.+.+... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999988 9999999988888899 788888888776543 3444 211 123333 1233333333222 479999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 998874
No 230
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.05 E-value=0.034 Score=49.87 Aligned_cols=78 Identities=22% Similarity=0.245 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE-E--ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++... . .|..+ .......+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999988 8999999998889999 8998988887765544 343211 1 22222 122333333322 23799
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
+++++.|
T Consensus 83 ~li~~ag 89 (263)
T PRK06200 83 CFVGNAG 89 (263)
T ss_pred EEEECCC
Confidence 9999887
No 231
>PRK06484 short chain dehydrogenase; Validated
Probab=96.05 E-value=0.078 Score=52.73 Aligned_cols=103 Identities=26% Similarity=0.364 Sum_probs=67.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE---EecCCCCCchHHHHHHhhcC--CCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE---FVNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
..|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++... ..|..+ .......+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 46789999988 9999999988888999 8999988887765444 354432 123333 1223333333222 369
Q ss_pred cEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 258 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 258 dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|++++++|.. .+.+.++..|..+ |++|.+++.
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988741 1244455666665 999988764
No 232
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.03 E-value=0.016 Score=50.46 Aligned_cols=101 Identities=22% Similarity=0.274 Sum_probs=65.0
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCCcEE-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~~~v-i~~~~~~~~~~~~~~~ 251 (371)
+.....++++++||-+|+| .|..++.+++..+. .+|++++.+++..+.++ ++|.+.+ +...+ ..+ .
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d----~~~---~ 140 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD----GTQ---G 140 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC----ccc---C
Confidence 3455678899999999886 46666677777653 36999999988666554 3454322 11111 100 1
Q ss_pred hc-CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 252 LT-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 252 ~~-~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.. .+.||+|+-....+.......+.|+++ |+++..
T Consensus 141 ~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 141 WEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred CcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 11 137998886555556677888999997 998764
No 233
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.03 E-value=0.059 Score=48.98 Aligned_cols=43 Identities=26% Similarity=0.264 Sum_probs=36.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
.+++++||+|+|+.+.+++.-+...|+.+++++.++.+|.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 3578999999999999998888889998999999988776544
No 234
>PRK06398 aldose dehydrogenase; Validated
Probab=96.01 E-value=0.068 Score=47.82 Aligned_cols=74 Identities=22% Similarity=0.304 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.. .... ..|..+ .....+.+.+... +.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999988 8999999999999999 8888877665321 1111 123333 1233333333222 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98773
No 235
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.1 Score=47.09 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=47.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE----EecCCCCCchHHHHHHhhc--CCCc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~----vi~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899988 9999999998888999 788888877654332 2233321 133333 122222222221 1369
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999998874
No 236
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.01 E-value=0.025 Score=48.11 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
+.++.+||-+|+| .|..++.+++.....+|++++.+++..+.++ +.+...+ .... .+..+ +.. .+.||+
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CCC--CCCccE
Confidence 4458899988875 3555566665554339999999988666554 3454321 1111 11111 111 237999
Q ss_pred EEEccC-C-HHHHHHHHHHhccCCceEEEEc
Q 017431 260 SFECIG-N-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 260 vid~~g-~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
|+.... . +..++.+.+.|+++ |+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 996322 2 35678899999997 9998773
No 237
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.96 E-value=0.044 Score=48.56 Aligned_cols=79 Identities=20% Similarity=0.306 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
.++++||+|+ |.+|.+.+..+...|+ +|+.+++++. ..+.+++++... . .|..+ .......+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999988 8999999888888999 8888877652 123334444321 1 23332 1233333333222 369
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998864
No 238
>PRK09186 flagellin modification protein A; Provisional
Probab=95.94 E-value=0.12 Score=45.94 Aligned_cols=78 Identities=22% Similarity=0.420 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCcE----EecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE----FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~----g~~~----vi~~~~~~~~~~~~~~~~~~- 254 (371)
++++|||+|+ |.+|.+.+..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+ .....+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 5789999988 8999999988888999 788888877664422 222 2211 123333 1223333333222
Q ss_pred -CCccEEEEccC
Q 017431 255 -GGVDYSFECIG 265 (371)
Q Consensus 255 -gg~dvvid~~g 265 (371)
+++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
No 239
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.044 Score=48.83 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=48.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcCCCcc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~gg~d 258 (371)
+++|||+|+ |.+|...++.+...|+ +|+++.+++++.+.+. +.+... + .|..+ . +.+.+...+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 468999988 9999999999999999 8888888776544332 233221 1 23322 1 223333334799
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
++|++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
No 240
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.19 Score=44.39 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=46.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cE--EecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE--FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~--vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+. .. ..|..+ ..+..+.+.+. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhc-ccCCCEEEEc
Confidence 57899988 9999998888878899 89999998887765544321 11 123333 12333333332 2245766655
Q ss_pred cC
Q 017431 264 IG 265 (371)
Q Consensus 264 ~g 265 (371)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 241
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.93 E-value=0.038 Score=51.31 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcE----EecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~~~~~~~g 255 (371)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+. + .+... ..|..+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5899999998 8999998887777899 8999999888765432 2 22111 223322112333344444444
Q ss_pred -CccEEEEccC
Q 017431 256 -GVDYSFECIG 265 (371)
Q Consensus 256 -g~dvvid~~g 265 (371)
.+|++++++|
T Consensus 131 ~didilVnnAG 141 (320)
T PLN02780 131 LDVGVLINNVG 141 (320)
T ss_pred CCccEEEEecC
Confidence 6779998876
No 242
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.92 E-value=0.22 Score=41.03 Aligned_cols=88 Identities=16% Similarity=0.171 Sum_probs=55.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|.+|||+|+|.+|..-++.+...|+ .|++++ ++..+.+.+++.-. ..... +.+ ..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~~~----~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----FSN----DDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----cCh----hcCCCceEEEECCC
Confidence 57899999999999998888888899 788774 33223334454211 21111 111 00127999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEE
Q 017431 266 NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.++ .+..+...+.. +.++..
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~ 99 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNV 99 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEE
Confidence 966 55555556553 445544
No 243
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.05 Score=48.91 Aligned_cols=104 Identities=21% Similarity=0.327 Sum_probs=64.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCcE-E--ecCCCCCchHHHHHHhhc-CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE-F--VNPKDHDKPIQQVLVDLT-DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~~-v--i~~~~~~~~~~~~~~~~~-~g 255 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++ +... . .|..+ ..+....+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4789999988 8999999999999999 8999988877654332 22 3221 1 23333 122223333322 24
Q ss_pred CccEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 256 GVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 256 g~dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
++|+++++.|.. ...+.++..|. .+.|++|.+++..
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~ 146 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA 146 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence 799999988741 02345555553 2238999887643
No 244
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.89 E-value=0.089 Score=48.54 Aligned_cols=91 Identities=22% Similarity=0.384 Sum_probs=61.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+|.|+|+|.+|.+.+..++..|. ..|+++++++++.+.+++.|...... .+..+.+ ..+|+|+.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence 579999999999999988888884 37899999998888888877532111 1111111 258999999987
Q ss_pred HH---HHHHHHHHhccCCceEEEEcc
Q 017431 267 VS---VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 267 ~~---~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. .++.....++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 43 233333445664 66666655
No 245
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.88 E-value=0.066 Score=47.01 Aligned_cols=103 Identities=25% Similarity=0.286 Sum_probs=72.5
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
....++.+|++|+=.|.| .|.++.-||++.|. .+|+..+..++..+.+++ +|....+.... .+ +.+..
T Consensus 87 ~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~D----v~~~~ 159 (256)
T COG2519 87 VARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GD----VREGI 159 (256)
T ss_pred HHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--cc----ccccc
Confidence 457889999999987775 57788888888874 699999999987776653 44433111111 11 22222
Q ss_pred CC-CccEEE-EccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 254 DG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 ~g-g~dvvi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. .+|.+| |.-...+.++.+.+.|.++ |.++.+..
T Consensus 160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 22 799665 7777778899999999997 99998854
No 246
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.044 Score=49.59 Aligned_cols=79 Identities=23% Similarity=0.262 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-E---EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-E---FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~---vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+.... . ..|..+ .......+.+... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999988 9999999998888999 899999988776655443221 1 123333 1222233333222 3689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 247
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.86 E-value=0.082 Score=49.20 Aligned_cols=94 Identities=16% Similarity=0.092 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCChHHHHHHHH-HHHcCCCeEEEEcCChhhHHH-HHh----cCCcEEecCCCCCchHHHHHHhhcCCCcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEG-AKAAGASRVIGIDIDPKKFDR-AKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~l-a~~~g~~~v~~v~~~~~~~~~-~~~----~g~~~vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
...++++|+|+|..|.+.+.. +...++++|.+.++++++.+. +++ ++.. +.... ++.+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence 356789999999999876654 456788899999999887653 333 3432 21122 233333 2589
Q ss_pred EEEEccCCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 259 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 259 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+|+.|+++.+ .... .++++| -.+..+|.+.
T Consensus 195 iVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCC-cchH-HhcCCC-cEEEecCCCC
Confidence 9999998865 3334 788896 8888888864
No 248
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.86 E-value=0.063 Score=49.04 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+++++||+|+|++|.+++..+...|+++|+++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999988888889997799998875
No 249
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.046 Score=48.46 Aligned_cols=79 Identities=28% Similarity=0.334 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCc-E--EecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVT-E--FVNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~-~--vi~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ .+ .+.. . ..|..+ .......+.+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999988 9999999998888899 899998887654322 22 2221 1 123322 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|+++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998883
No 250
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.86 E-value=0.028 Score=51.12 Aligned_cols=94 Identities=16% Similarity=0.143 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
..+++|||+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++....+.. + .+..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccchhcc-----ccCCEEEEC
Confidence 4578999999999999999999999966999999988876544 44432110101 0 0000000 269999999
Q ss_pred cCCHHH-----HHHHHHHhccCCceEEEE
Q 017431 264 IGNVSV-----MRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~-----~~~~~~~l~~~~G~iv~~ 287 (371)
++.... .......+.+. ..++++
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 875210 01223456664 566555
No 251
>PRK09242 tropinone reductase; Provisional
Probab=95.85 E-value=0.15 Score=45.45 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCcEE---ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTEF---VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~-----g~~~v---i~~~~~~~~~~~~~~~~~-- 253 (371)
.++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++ +.... .|..+ .......+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 8888888776544332 22 22111 23222 122222232222
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
-+++|+++++.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 1379999999874
No 252
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.041 Score=48.98 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCcE---EecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE---FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~---~g~~~---vi~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.++++.++.+.+. + .+... ..|..+ .....+.+.+... +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999999989999 8988888876654332 2 23221 123322 1223333332221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998774
No 253
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.79 E-value=0.081 Score=47.04 Aligned_cols=79 Identities=24% Similarity=0.305 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
++++|||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .+ .+... . .|..+ .......+.+.. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4579999987 9999999998888899 888888887755433 22 23221 1 22222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 69999998863
No 254
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.77 E-value=0.14 Score=47.46 Aligned_cols=95 Identities=17% Similarity=0.154 Sum_probs=59.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|||+|+ |-+|...+..+...|. +|.+++++.++...+...+...+. |..+ . +.+.+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d--~---~~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL--P---ETLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC--H---HHHHHHHC-CCCEEEECCCC
Confidence 6999988 9999999999988999 899988887665555555553332 2222 1 12222222 68999998763
Q ss_pred HH------------HHHHHHHHhccC-CceEEEEccC
Q 017431 267 VS------------VMRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 267 ~~------------~~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
.. ....+++.+... -.++|.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 11 123444555442 1378887663
No 255
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.72 E-value=0.058 Score=47.77 Aligned_cols=78 Identities=21% Similarity=0.372 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE---EecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+... ..|..+ .....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 789898887654432 2234322 122222 1223233333222 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|.+|+++|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 256
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.15 Score=46.51 Aligned_cols=104 Identities=19% Similarity=0.216 Sum_probs=60.9
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-H----HHHHhcCCcEE---ecCCCCCchHHHHHHhhcC
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-F----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~----~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~ 254 (371)
.-+++++||+|+ |.+|.+.+..+...|+ +|+.+.+++++ . +.++..+.... .|..+ .....+.+.+...
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~ 120 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVR 120 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 345789999988 9999998888888899 78887766432 1 12223343221 22222 1222222222221
Q ss_pred --CCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 --GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 --gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|++++++|.. .+.+.+.+.+.+. |++|.+++.
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS~ 183 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGSI 183 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 3689999887741 0123444555665 899988763
No 257
>PRK06484 short chain dehydrogenase; Validated
Probab=95.69 E-value=0.12 Score=51.27 Aligned_cols=79 Identities=24% Similarity=0.362 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE---EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+ +.++++... ..|..+ .....+.+.+... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999988 8999999999999999 8999988877654 444555432 233333 1233333333222 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998763
No 258
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.071 Score=48.79 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +.+... . .|..+ .....+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999988 9999999998888899 8999988877654332 223321 2 23222 122222232221 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 259
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.66 E-value=0.061 Score=52.76 Aligned_cols=78 Identities=31% Similarity=0.409 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhcCCcEEecCCCCCc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
..+++|+|+|+|+.|+.++..++..|+ .|++++..+ ...+.++++|++..++..- ..
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~ 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GR 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CC
Confidence 368899999999999999999999999 788887654 2346677888865544321 11
Q ss_pred hHHHHHHhhcCCCccEEEEccCCH
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+. .+.+.. .++|.+|.++|..
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCC
Confidence 10 111111 2699999999974
No 260
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.13 Score=46.53 Aligned_cols=78 Identities=18% Similarity=0.205 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCc-EE--ecCCCCCchHHHHHHhhc--CCCccE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT-EF--VNPKDHDKPIQQVLVDLT--DGGVDY 259 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~-~v--i~~~~~~~~~~~~~~~~~--~gg~dv 259 (371)
+++|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ ++.. .. .|..+ .....+.+.+.. .+++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999988 9999998888888898 89998888776654433 3221 11 22222 122222233221 137899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999875
No 261
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.63 E-value=0.074 Score=48.29 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=56.2
Q ss_pred CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 184 VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 184 ~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.-.|++|+|+|+|. +|...+.++...|+ .|+.+.+..+ + +.+.+ ..+|++++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~--~-------------------L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ--N-------------------LPELV-----KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch--h-------------------HHHHh-----ccCCEEEE
Confidence 46789999999976 99999999999999 8888754211 1 11111 25999999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++|.+..+. .+.+.++ ..++++|..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 998866433 3558886 888888764
No 262
>PRK06196 oxidoreductase; Provisional
Probab=95.62 E-value=0.074 Score=49.18 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
.+++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+ .++..... .|..+ .......+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4679999988 9999999888888899 888888887765433 33321122 23333 1222223333222 37999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
+++++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 263
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.098 Score=46.71 Aligned_cols=81 Identities=23% Similarity=0.289 Sum_probs=49.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhh-HH-H---HHhcCC--cEE--ecCCCCCchHHHHHHhh
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKK-FD-R---AKNFGV--TEF--VNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g-~~~v~~v~~~~~~-~~-~---~~~~g~--~~v--i~~~~~~~~~~~~~~~~ 252 (371)
+..+++|||+|+ |++|.+.++-+...| + +|+++++++++ .+ + +++.+. .++ .|..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999988 999999887766664 7 88888887764 32 2 223332 122 33332 12222233333
Q ss_pred cC-CCccEEEEccCC
Q 017431 253 TD-GGVDYSFECIGN 266 (371)
Q Consensus 253 ~~-gg~dvvid~~g~ 266 (371)
.. +++|+++++.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479998887754
No 264
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.059 Score=48.09 Aligned_cols=80 Identities=19% Similarity=0.270 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~----~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++++|+|+ |.+|...++.+...|++.|+++++++++.+ .+++.+.... .|..+ ...+.+.+..... +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5689999988 999999999999999944889888765443 2233443321 23332 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.+.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 265
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.59 E-value=0.083 Score=48.17 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+++++||+|+|+.+.+++..+...|+++++++.|++
T Consensus 122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3678999999998998877767778998999999884
No 266
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.08 Score=47.43 Aligned_cols=79 Identities=23% Similarity=0.336 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCc-EE--ecCCCCCchHHHHHHhhc-CCCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EF--VNPKDHDKPIQQVLVDLT-DGGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~--g~~-~v--i~~~~~~~~~~~~~~~~~-~gg~ 257 (371)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++ +.. +. .|..+ ............ .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999987 9999999988888999 8999988877654433 22 211 11 22222 112222211111 2478
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|++++++|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998875
No 267
>PRK07985 oxidoreductase; Provisional
Probab=95.58 E-value=0.15 Score=46.67 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHH----HHhcCCcE---EecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDR----AKNFGVTE---FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~--~~~~~----~~~~g~~~---vi~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+. +++.+... ..|..+ .......+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5689999988 9999999988888999 787776543 22222 22334322 123322 1222233333222
Q ss_pred -CCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 -GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 -gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.|.. .+++.++..|..+ |++|.+++.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3789999887631 1234555556675 899988764
No 268
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.55 E-value=0.074 Score=54.35 Aligned_cols=75 Identities=29% Similarity=0.355 Sum_probs=54.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCcEEecCCCC-Cc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 243 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~---------------------~~~~~~~~g~~~vi~~~~~-~~ 243 (371)
.+++|+|+|+|+.|+.++..++..|+ +|++++..+. ..++++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 4566778888655543211 11
Q ss_pred hHHHHHHhhcCCCccEEEEccCC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+. ++. .++|.+|.++|.
T Consensus 388 ~~~----~l~-~~~DaV~latGa 405 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGT 405 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCC
Confidence 221 121 269999999887
No 269
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.55 E-value=0.26 Score=42.18 Aligned_cols=104 Identities=22% Similarity=0.333 Sum_probs=61.5
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~ 251 (371)
+....++.++++||=+|+| .|..++.+++.....+|++++.+++..+.+++ ++... ++. .+..+.+..
T Consensus 32 l~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-----~d~~~~~~~ 105 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-----GSAPECLAQ 105 (196)
T ss_pred HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-----CchHHHHhh
Confidence 3455567788888878774 34455566665433499999999987766643 55432 221 112122222
Q ss_pred hcCCCccE-EEEccCC-HHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDY-SFECIGN-VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dv-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. ..+|. .++.... ...++.+.+.|+++ |+++....
T Consensus 106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 21 23444 4443222 36688999999997 99887743
No 270
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.073 Score=47.44 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~dvv 260 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ .....+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999988 9999999988888999 6766544 3334444443333221 23333 122333333322 1379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998864
No 271
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.22 Score=43.80 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=59.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhcCCcE-E--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~~----~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
+++++||+|+ |.+|...++.+...|+ +++.+.++.+ +.+ .+++.+... . .|..+ .....+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5689999987 9999999999999999 6666654332 221 222334321 1 22222 122222222221 1
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.|.. ..++.+++.+..+ |+++.+++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 3799999988741 1234455566675 899988764
No 272
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.54 E-value=0.098 Score=45.96 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=49.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
++++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.+++.+...+ .|..+ .......+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999988 8999999998888999 88888776643 334445554221 23222 1222333333322 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 273
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.54 E-value=0.094 Score=46.93 Aligned_cols=102 Identities=18% Similarity=0.308 Sum_probs=61.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCCcEEe--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEFV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~----~~~~~~g~~~vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|++ ++|.+.++.+...|+ +|+.++++++.. ++.++++....+ |..+ ..+....+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 47899999873 899998888888999 788887775432 222334432222 2222 1222222222221
Q ss_pred CCccEEEEccCCH--------------H---------------HHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+|+++++.|.. + ..+.++..|..+ |+++.+++.
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~ 150 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYY 150 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEecc
Confidence 4799999987631 0 135566667775 898887653
No 274
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.54 E-value=0.059 Score=48.02 Aligned_cols=79 Identities=29% Similarity=0.380 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++.|... . .|..+ .......+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999998888899 888888887654322 2233222 1 23332 122333333322 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 275
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.061 Score=48.22 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcE----EecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~~~~~~~- 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. + .+... ..|..+ .....+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 5789999988 8999999999989999 8999988877654322 1 11112 123333 1222222333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 379999999874
No 276
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.52 E-value=0.11 Score=45.28 Aligned_cols=95 Identities=25% Similarity=0.306 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
-+|.+||=+|+| .|+++..+|+. |+ .|+++|-+++-.+.++.-.... -++|.. ...+.+... ++.||+|++
T Consensus 58 l~g~~vLDvGCG-gG~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCG-GGILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCC-ccHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhc-CCCccEEEE
Confidence 478899988885 25777777765 78 9999999999888887432211 133433 222222222 138999987
Q ss_pred -----ccCCH-HHHHHHHHHhccCCceEEEE
Q 017431 263 -----CIGNV-SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 263 -----~~g~~-~~~~~~~~~l~~~~G~iv~~ 287 (371)
-+..+ ..++.+.+.++|+ |.++.-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 34443 3578899999996 887644
No 277
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.52 E-value=0.1 Score=44.87 Aligned_cols=83 Identities=30% Similarity=0.385 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
--+|++|+|+|.|.+|..+++.+...|+ +|+++++++++.+.+. .+++. .++..+ +....+|+++-
T Consensus 25 ~l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----------l~~~~~Dv~vp 91 (200)
T cd01075 25 SLEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----------IYSVDADVFAP 91 (200)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----------hccccCCEEEe
Confidence 3467899999999999999999999999 8999998888766554 44642 332211 11115888886
Q ss_pred ccCCHHHHHHHHHHhcc
Q 017431 263 CIGNVSVMRAALECCHK 279 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~ 279 (371)
|..+...-...++.|..
T Consensus 92 ~A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 92 CALGGVINDDTIPQLKA 108 (200)
T ss_pred cccccccCHHHHHHcCC
Confidence 65543434555555543
No 278
>PRK08589 short chain dehydrogenase; Validated
Probab=95.50 E-value=0.067 Score=48.29 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE---EecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ +++|.+.++.+...|+ +|++++++++..+.+.+ .+... ..|..+ .......+.+... +.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999998888888899 88888887433333333 23211 133332 1223333333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998764
No 279
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.50 E-value=0.09 Score=50.19 Aligned_cols=91 Identities=29% Similarity=0.387 Sum_probs=56.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh--cCCcE---EecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN--FGVTE---FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~--~g~~~---vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
|+|+|+|.+|..+++.+...+- .+|++.+++.++.+.+.+ .+... .+|..+ .+.+.+... +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HHHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HHHHHHHHh-cCCEEEEC
Confidence 6889999999999998887764 389999999998765543 22211 233332 122444332 46999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEE
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+|.......+-.|+..+ -.+++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CccchhHHHHHHHHHhC-CCeecc
Confidence 99754455555666664 667663
No 280
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.083 Score=47.17 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC--c-EE--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~--~-~v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+.+|||+|+ |++|.+.+..+...|+ +|+.++++.++.+.+. ++.. . .. .|..+ .....+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999987 9999998888888899 8999988877665433 2221 1 11 23322 1223333333222 358
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|++++++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998763
No 281
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.49 E-value=0.083 Score=47.13 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.... .|..+ .....+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999998889999 788888887554322 33444322 12222 122222222211 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 282
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.074 Score=47.33 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ ++.+.... .|..+ .......+.+... +
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4679999988 8999999988888999 888888887765433 22343221 22222 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|++++++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 283
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.12 Score=45.61 Aligned_cols=80 Identities=25% Similarity=0.325 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC-c---EEecCCCC-Cch---HHHHHHhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV-T---EFVNPKDH-DKP---IQQVLVDL 252 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~-~---~vi~~~~~-~~~---~~~~~~~~ 252 (371)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+. . ...|..+. ... +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999988 9999999988888999 8999988887654332 2221 1 11222110 112 22233333
Q ss_pred cCCCccEEEEccCC
Q 017431 253 TDGGVDYSFECIGN 266 (371)
Q Consensus 253 ~~gg~dvvid~~g~ 266 (371)
..+.+|++++++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999998884
No 284
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.47 E-value=0.15 Score=44.93 Aligned_cols=35 Identities=40% Similarity=0.512 Sum_probs=31.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
..+|+|+|.|++|..++..+-..|..+++.++.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46899999999999999999999999999998654
No 285
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.47 E-value=0.058 Score=46.30 Aligned_cols=98 Identities=20% Similarity=0.291 Sum_probs=60.4
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc-CC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT-DG 255 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~-~g 255 (371)
.....++.+||-+|+|. |..+..+++. |. +|++++.+++-.+.+++ .+...+ .... .++ .+.. .+
T Consensus 25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~----~~~~~~~ 94 (197)
T PRK11207 25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDL----NNLTFDG 94 (197)
T ss_pred hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cCh----hhCCcCC
Confidence 33455678999998863 6677778875 77 99999999876665543 232211 0000 111 1111 23
Q ss_pred CccEEEEccC----C----HHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSFECIG----N----VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvid~~g----~----~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.||+|+.... . ...+..+.+.|+++ |.++.+..
T Consensus 95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~~ 135 (197)
T PRK11207 95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVAA 135 (197)
T ss_pred CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence 7999997533 1 24577888889997 99665533
No 286
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.46 E-value=0.35 Score=43.48 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|+|+|.|++|..++..+-..|.++++.++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999998899999865
No 287
>PRK06194 hypothetical protein; Provisional
Probab=95.45 E-value=0.072 Score=48.37 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCcE-Ee--cCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTE-FV--NPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g~~~-vi--~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ .++ +... .+ |..+ .....+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999988 9999999988888999 888888876554332 222 3322 12 2222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 288
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.083 Score=47.05 Aligned_cols=79 Identities=22% Similarity=0.260 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCcE---EecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE---FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~---g~~~---vi~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+. ++ +... ..|..+ .......+.+... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999998889999 8999988876544332 22 3221 223322 1223333333221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998864
No 289
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.43 E-value=0.19 Score=44.94 Aligned_cols=103 Identities=20% Similarity=0.303 Sum_probs=60.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHH-HHHhc-CCc-E--EecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFD-RAKNF-GVT-E--FVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~---~~~~-~~~~~-g~~-~--vi~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++.+ +..++ +.. . ..|..+ .......+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4789999987 4899998888888999 788876543 2222 33333 211 1 123333 1223333333322
Q ss_pred --CCccEEEEccCCH-------H----------------------HHHHHHHHhccCCceEEEEccCC
Q 017431 255 --GGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 --gg~dvvid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++|+++++.|.. . ..+.++..|.++ |+||.+++..
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~~ 150 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYLG 150 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEcccC
Confidence 4799999887621 0 123445566775 9999887643
No 290
>PLN02476 O-methyltransferase
Probab=95.43 E-value=0.13 Score=46.51 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=67.6
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
....+..+.++||=+|++ +|..++.+|+.++ -.+|++++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~ 187 (278)
T PLN02476 111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMI 187 (278)
T ss_pred HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHH
Confidence 344556678899999874 5777778888774 237999999998877664 456542221111 23334444331
Q ss_pred ----CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 254 ----DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ----~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.||+||--... +..++.+++.|++| |.++.=
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 2379988843333 35588999999996 887743
No 291
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.045 Score=49.26 Aligned_cols=77 Identities=26% Similarity=0.349 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
.+++++|+|+ |.+|...++.+...|+ +|++++++.++.+.. .+... ..|..+ ...+.+.+.+... +.+|+++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD-DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999988 9999998888888899 899988876654322 12221 223333 2333444443322 3799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
No 292
>PRK05717 oxidoreductase; Validated
Probab=95.41 E-value=0.082 Score=47.12 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE---EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.|+++||+|+ |.+|...+..+...|+ +|+.++++.++.+ ..++++... ..|..+ .......+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999987 9999999888888899 8888877765443 334444322 122222 1222222333222 3689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 293
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.41 E-value=0.11 Score=48.53 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+.+|+|+|+|++|..++..+..+|.++++.++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998999998864
No 294
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.39 E-value=0.11 Score=45.86 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=66.1
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc-
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~- 253 (371)
...+..+.++||=+|+| .|..++.+++.++ ..+|++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHh
Confidence 44556678899988874 5666777777764 4499999999987776654 45432111111 23333344332
Q ss_pred ---CCCccEEEEccC---CHHHHHHHHHHhccCCceEEEE
Q 017431 254 ---DGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ---~gg~dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.||+||--.. -...++.+++.+++| |.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 237999884432 235688899999996 887653
No 295
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.38 E-value=0.076 Score=47.28 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCcE---EecCCCCCchHHHHHHhhc--CCCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~~~~g~~~---vi~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++.. .+.+++.+... ..|..+ ..+..+.+.+.. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999988 9999999998888999 78877665421 22334444322 133333 123333333322 1379
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998874
No 296
>PRK06849 hypothetical protein; Provisional
Probab=95.38 E-value=0.53 Score=44.95 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE--ec-CCCCCchHHHHHHhhcCC-CccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VN-PKDHDKPIQQVLVDLTDG-GVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v--i~-~~~~~~~~~~~~~~~~~g-g~dvv 260 (371)
...+|||+|+ .+.|+..+..++..|. +|+++++.+.......+ .++.. +. +......+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4589999998 5689999999999999 89999887654332111 12222 21 222224567777776666 89999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+-+...
T Consensus 81 IP~~e~ 86 (389)
T PRK06849 81 IPTCEE 86 (389)
T ss_pred EECChH
Confidence 987654
No 297
>PRK04457 spermidine synthase; Provisional
Probab=95.38 E-value=0.2 Score=45.10 Aligned_cols=95 Identities=13% Similarity=0.143 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCc----E--EecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT----E--FVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~-g~~----~--vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.++++||++|.|+ |..+..+++.....++++++.+++-.+.++++ +.. . ++. .+..+.+.+. .+.+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~-----~Da~~~l~~~-~~~y 137 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE-----ADGAEYIAVH-RHST 137 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE-----CCHHHHHHhC-CCCC
Confidence 3567899999863 77788888877544899999999988888763 321 1 121 2333334332 3479
Q ss_pred cEEE-EccCC---------HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSF-ECIGN---------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+|+ |...+ .+.++.+.+.|+++ |.++..
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 9887 43221 46789999999997 998863
No 298
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.082 Score=46.98 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .......+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999998888888899 799998887654322 3334322 1 22222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 299
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.36 E-value=0.068 Score=47.74 Aligned_cols=78 Identities=26% Similarity=0.319 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE---EecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++...+..++ .+... ..|..+ .....+.+.+... ++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999998888999 88888887543333333 33322 123333 1222333333221 37
Q ss_pred ccEEEEccC
Q 017431 257 VDYSFECIG 265 (371)
Q Consensus 257 ~dvvid~~g 265 (371)
+|++++++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999886
No 300
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.09 Score=47.62 Aligned_cols=79 Identities=24% Similarity=0.310 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ + +.+.... .|..+ ..+..+.+.+.. -+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999987 9999999988888999 788888877654422 2 2343221 23222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 301
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.11 Score=45.76 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. +.+... . .|..+ .......+.+... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999987 9999999999988999 8999988876554332 222221 1 23222 1222233333221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
+.|+++++.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 302
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.34 E-value=0.096 Score=47.32 Aligned_cols=78 Identities=19% Similarity=0.272 Sum_probs=48.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~----~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|++ ++|.+.++.+...|+ +|+.+.++++.. ++.+++|.... .|..+ ..+....+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 57899999884 899998888888999 888887765322 22234453322 23333 1222223333222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|+++++.|
T Consensus 84 g~iD~lVnnAG 94 (271)
T PRK06505 84 GKLDFVVHAIG 94 (271)
T ss_pred CCCCEEEECCc
Confidence 47999999887
No 303
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.32 E-value=0.095 Score=46.80 Aligned_cols=79 Identities=25% Similarity=0.404 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ...+...+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999987 9999999988888999 8999988877654332 223221 1 23332 1223222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|.++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 304
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.091 Score=46.72 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-Ee--cCCCCCchHHHHHHhhcC--CC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-vi--~~~~~~~~~~~~~~~~~~--gg 256 (371)
|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+... .+ |..+ .....+.+.+... +.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 478999988 8999999999999999 8999988876554332 223221 22 3222 1223333333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 305
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.13 Score=45.80 Aligned_cols=73 Identities=21% Similarity=0.315 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEE--ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++ +..+.... +.... .|..+ . +.+.+.. +++|+++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~---~~~~~~~-~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK--E---ESLDKQL-ASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC--H---HHHHHhc-CCCCEEE
Confidence 3689999988 8999999998888999 888887765 22222111 11122 23222 1 1233322 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99874
No 306
>PRK08264 short chain dehydrogenase; Validated
Probab=95.31 E-value=0.076 Score=46.69 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EE--ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v--i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
.++++||+|+ |.+|.+.++.+...|+++|++++++.++.+. .+.. .+ .|..+ ...+.+.+... +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 4578999987 9999999999988998678888887765432 2221 11 22222 12222222221 2589999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 307
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.29 E-value=0.098 Score=46.63 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=62.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
.|+++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.... . .|..+ ..+..+.+.+... +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57899999874 899998888888899 8888877754444444442211 1 23222 1222233333221 47
Q ss_pred ccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 257 VDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 257 ~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|+++++.|.. .+.+.++..|.++ |+++.+++.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~-g~Iv~iss~ 145 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG-ASIVTLTYF 145 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC-ceEEEEecc
Confidence 99999987631 0134445667775 899888764
No 308
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.14 Score=44.78 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=47.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+++|+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ .....+.+.+. .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence 5899988 9999999998888899 888888887766533 44444322 23332 12222222222 236899998764
No 309
>PLN03075 nicotianamine synthase; Provisional
Probab=95.26 E-value=0.12 Score=47.03 Aligned_cols=95 Identities=21% Similarity=0.171 Sum_probs=65.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcC-----CcEEecCCCCCchHHHHHHhhc--CCCc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFG-----VTEFVNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
++++|+-+|+|+.++.++.+++.+. -.+++.++.+++..+.+++.- ...-+.... .+.. +.. .++|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~----~~~~~l~~F 196 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVM----DVTESLKEY 196 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchh----hcccccCCc
Confidence 7789999999999999998887654 338999999999888877543 212111111 1111 112 1379
Q ss_pred cEEEEcc-------CCHHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSFECI-------GNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvid~~-------g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+||..+ .....++...+.|++| |.++.=
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 9999765 2245689999999996 887744
No 310
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.26 E-value=0.12 Score=46.65 Aligned_cols=79 Identities=24% Similarity=0.288 Sum_probs=57.1
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhhHHHHH-----hcCC---cEEecCCCCCchHHHHHHhhcC
Q 017431 185 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGV---TEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~-ai~la~~~g~~~v~~v~~~~~~~~~~~-----~~g~---~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
+-|++.+|+|| .++|.+ |-++|+ .|. +|+.+.|+.+|++..+ +.++ ..++|..+.+..+ +.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~y-e~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVY-EKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhH-HHHHHHhc
Confidence 44689999998 789987 777777 899 8999999999987653 3443 1246766644434 44555555
Q ss_pred C-CccEEEEccCC
Q 017431 255 G-GVDYSFECIGN 266 (371)
Q Consensus 255 g-g~dvvid~~g~ 266 (371)
+ .+-+.+|++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 88899999886
No 311
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.25 E-value=0.049 Score=44.92 Aligned_cols=78 Identities=21% Similarity=0.225 Sum_probs=47.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHH-HH---HhcCCcEE-e--cCCCCCchHHHHHHhhc--CC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFD-RA---KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~--~~~~~-~~---~~~g~~~v-i--~~~~~~~~~~~~~~~~~--~g 255 (371)
+++||+|+ +++|.+.++.+-..|..+|+.+.++ .++.+ ++ +..+.... + |..+ ..+....+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 47899988 9999998887777787688888888 33333 32 33443222 2 2222 123333333333 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|++|++.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999998886
No 312
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.077 Score=47.18 Aligned_cols=75 Identities=24% Similarity=0.345 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EE--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++ ...+.. .. .|..+ .....+.+.+... +.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4789999988 9999999988888999 88888887654 112211 11 23222 1223333333221 36899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
+|++.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
No 313
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.24 E-value=0.12 Score=45.79 Aligned_cols=35 Identities=34% Similarity=0.484 Sum_probs=31.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+.+|+|.|+|++|..+++.+..+|.++++.++.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999999999987654
No 314
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.2 Score=43.54 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=45.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEe--cCCCCCchHHHHHHhhcCC--CccEEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFV--NPKDHDKPIQQVLVDLTDG--GVDYSF 261 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi--~~~~~~~~~~~~~~~~~~g--g~dvvi 261 (371)
+++||+|+ |.+|...+..+... + +|++++++.++.+.+.+ ....+++ |..+ . +.+.+.... +.|.++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD--P---EAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC--H---HHHHHHHHhcCCCCEEE
Confidence 58999988 99999888777666 6 79999888776554432 2111222 2222 1 223332222 699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 98874
No 315
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.089 Score=46.62 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc--CCc-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF--GVT-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~--g~~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+.++.++.+.. .++ +.. .. .|..+ .....+.+.+... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4679999988 9999998888878899 888888877654332 222 221 12 22222 1222222222211 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998884
No 316
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.092 Score=46.89 Aligned_cols=77 Identities=21% Similarity=0.325 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcE-E--ecCCCCCchHHHHHHhhcCCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE-F--VNPKDHDKPIQQVLVDLTDGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~-v--i~~~~~~~~~~~~~~~~~~gg 256 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. + .+... . .|..+ .......+.. . +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~-~-g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAE-A-GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHH-h-CC
Confidence 4789999988 8999999988888999 8999988876554322 1 23221 2 22222 1222222222 1 47
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 317
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.1 Score=47.06 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=49.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcE---EecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE---FVNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++ .+... ..|..+ .......+.+... +++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999987 9999998888888899 89999888876655443 22211 123332 1223333333221 378999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|+++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 318
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.15 Score=44.71 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+ ++.+... . .|..+ .....+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 8999998888888899 888888887765432 2334322 1 22222 1223222322221 3
Q ss_pred -CccEEEEccC
Q 017431 256 -GVDYSFECIG 265 (371)
Q Consensus 256 -g~dvvid~~g 265 (371)
.+|+++++.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6999999886
No 319
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.11 Score=46.50 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCcE-E--ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~-----g~~~-v--i~~~~~~~~~~~~~~~~~-- 253 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +++ +... . .|..+ ..+....+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4689999988 9999999998889999 888888877655433 222 2211 1 23222 122333333322
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
.+.+|+++++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 1379999998873
No 320
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.099 Score=46.41 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCc-EE--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVT-EF--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~-~v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.++++.++.+.+ ++ .+.. .. .|..+ .......+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4578999988 9999999999999999 899998877654432 22 2322 11 22222 1222223333222 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
.+|+++++.+
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899998887
No 321
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.11 Score=46.51 Aligned_cols=78 Identities=19% Similarity=0.331 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--CC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +..+.... .|..+ ...+...+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 357999988 9999999999889999 899998887654322 22333221 22222 1223333333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 322
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.31 Score=44.10 Aligned_cols=100 Identities=22% Similarity=0.323 Sum_probs=59.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCcE-E--ecCCCCCchHHHHHHhhc-CCCcc
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-F--VNPKDHDKPIQQVLVDLT-DGGVD 258 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~~~-v--i~~~~~~~~~~~~~~~~~-~gg~d 258 (371)
++++||+|+|++|.+.+..+. .|+ +|+.+++++++.+.+ + +.+... . .|..+ .......+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 357889999999999888774 798 888888877654322 2 223221 1 23333 122333333221 24799
Q ss_pred EEEEccCCH------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGNV------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++++++|.. .+++.+...+..+ |+++.+++.
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~ 127 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQ 127 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEec
Confidence 999988741 1244455566665 777777653
No 323
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.19 E-value=0.13 Score=48.06 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
...+|+|+|+|++|..+++.+...|.++++.++.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 347899999999999999999999999999998763
No 324
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.18 E-value=0.13 Score=44.60 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
+..+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44689999999999999999999999889999877
No 325
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.12 Score=47.75 Aligned_cols=39 Identities=33% Similarity=0.312 Sum_probs=32.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
+|++++|+|+ +++|.+.+..+...|+ +|+.+.+++++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~ 52 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGE 52 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 4689999988 9999998888888899 8888888876543
No 326
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.11 Score=46.52 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+.++++++..+.+++ .+... . .|..+ ..+....+.+... +.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999998888999 79998887654433332 23221 1 22222 1222222332221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 327
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.17 E-value=0.026 Score=48.72 Aligned_cols=101 Identities=21% Similarity=0.307 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcC----
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD---- 254 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~---- 254 (371)
....++||-+|++ +|..++.+|+.+.- .+|+.++.++++.+.+++ .|...-+.... .+..+.+.++.+
T Consensus 43 ~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 43 LTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGEE 119 (205)
T ss_dssp HHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTTT
T ss_pred hcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccCC
Confidence 3455799999885 68888899988741 299999999998777743 45432111111 233344444322
Q ss_pred CCccEEE-EccCC--HHHHHHHHHHhccCCceEEEEc
Q 017431 255 GGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 255 gg~dvvi-d~~g~--~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.||+|| |+--. ...++.+++.|+++ |.++.=.
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699888 54332 24478889999996 7776443
No 328
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.16 E-value=0.082 Score=45.44 Aligned_cols=35 Identities=37% Similarity=0.541 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
+..+|+|+|+|++|...++.+...|.++++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34789999999999999999989999889999887
No 329
>PRK08317 hypothetical protein; Provisional
Probab=95.16 E-value=0.25 Score=43.27 Aligned_cols=102 Identities=25% Similarity=0.318 Sum_probs=67.7
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. +....+...+. ... ...
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-----~~~ 84 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA-DGL-----PFP 84 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc-ccC-----CCC
Confidence 4566788899999999975 888889988874 33899999999887777654 11111111110 000 112
Q ss_pred CCCccEEEEcc-----CC-HHHHHHHHHHhccCCceEEEEc
Q 017431 254 DGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 254 ~gg~dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
++.+|+|+... .. ...++.+.++|+++ |.++...
T Consensus 85 ~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 85 DGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 23799888532 22 34689999999997 9988764
No 330
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.12 Score=46.02 Aligned_cols=79 Identities=19% Similarity=0.291 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHH---HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRA---KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~---~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.+ ++.+... . .|..+ .....+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4689999987 8999999998888999 88888776432 2222 2334322 1 22222 1223333333221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+.+|+++++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 331
>PLN00203 glutamyl-tRNA reductase
Probab=95.15 E-value=0.084 Score=52.10 Aligned_cols=74 Identities=15% Similarity=0.259 Sum_probs=51.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+.+|+|+|+|.+|.+++..+...|+++|+++.++.++.+.+ .+++...+. .... .+..+.+ ..+|+||.|++
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~~~~-~dl~~al-----~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-YKPL-DEMLACA-----AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-eecH-hhHHHHH-----hcCCEEEEccC
Confidence 68999999999999999999999987899999998876544 455321111 1110 1111111 26999999987
Q ss_pred CH
Q 017431 266 NV 267 (371)
Q Consensus 266 ~~ 267 (371)
.+
T Consensus 339 s~ 340 (519)
T PLN00203 339 SE 340 (519)
T ss_pred CC
Confidence 64
No 332
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.14 E-value=0.16 Score=43.45 Aligned_cols=77 Identities=26% Similarity=0.286 Sum_probs=49.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCcEE-ecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF-VNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~~v-i~~~~~~~~~~~~~~~~~~gg~ 257 (371)
-++.+++|+|+ |.+|.+.+..+...|+ +|+.+.++.++.+.+. ++ +.... .+..+ ..+..+.+ .++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~ 98 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGA 98 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcC
Confidence 36789999987 9999988888888888 8888888877655432 23 22211 11111 01111222 258
Q ss_pred cEEEEccCCHH
Q 017431 258 DYSFECIGNVS 268 (371)
Q Consensus 258 dvvid~~g~~~ 268 (371)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999887644
No 333
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.13 E-value=0.12 Score=46.59 Aligned_cols=103 Identities=17% Similarity=0.314 Sum_probs=73.5
Q ss_pred hhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-E--E--ecCCCCCch
Q 017431 174 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-E--F--VNPKDHDKP 244 (371)
Q Consensus 174 a~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~--v--i~~~~~~~~ 244 (371)
++..+.+..++++|++||=+|+| =|.+++.+|+..|+ +|++++-++++.+.+++ .|.. . + -++.+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 34456789999999999999886 36677788888899 99999999998776654 5553 1 1 12222
Q ss_pred HHHHHHhhcCCCccEEEE-----ccCC---HHHHHHHHHHhccCCceEEEEccCC
Q 017431 245 IQQVLVDLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
.+ +.||-|+. .+|. +..+..+.+.|+++ |++.......
T Consensus 134 -------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~ 179 (283)
T COG2230 134 -------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITG 179 (283)
T ss_pred -------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecC
Confidence 11 14776664 3443 45689999999997 9998776643
No 334
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.13 E-value=0.3 Score=42.63 Aligned_cols=102 Identities=25% Similarity=0.292 Sum_probs=62.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh------hH-------------H----HHHhcCCcEEecCCCCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK------KF-------------D----RAKNFGVTEFVNPKDHD 242 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~------~~-------------~----~~~~~g~~~vi~~~~~~ 242 (371)
+.++|+|+|.|++|-+++..+-..|.+++..++-+.= |+ + +.++.++..-+...+ +
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-~ 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-D 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH-h
Confidence 4578999999999999999999999999988865441 11 1 112222211111111 0
Q ss_pred chHHHHHHhhcCCCccEEEEccCCHHH-HHHHHHHhccCCceEEEEcc
Q 017431 243 KPIQQVLVDLTDGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 243 ~~~~~~~~~~~~gg~dvvid~~g~~~~-~~~~~~~l~~~~G~iv~~g~ 289 (371)
.-..+.+.++...++|+|+||..+-.. ...+..|.+.+ =.+|..+.
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~G 154 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMG 154 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecc
Confidence 111223455555589999999988544 34444466664 56666654
No 335
>PRK01581 speE spermidine synthase; Validated
Probab=95.13 E-value=0.54 Score=44.05 Aligned_cols=102 Identities=17% Similarity=0.068 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cE----EecCCCC---CchHHHHHHhhcCCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE----FVNPKDH---DKPIQQVLVDLTDGG 256 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~----vi~~~~~---~~~~~~~~~~~~~gg 256 (371)
...++|||+|+| .|.++..+++..+..+|++++.+++-.++++++.. .. .++.... -.+..+.+.+ +.+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 345799999875 56677777777666799999999998888886310 00 0000000 0222333333 3347
Q ss_pred ccEEEEccCC-----------HHHHHHHHHHhccCCceEEEEcc
Q 017431 257 VDYSFECIGN-----------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 257 ~dvvid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
||+||--... .+.++.+.+.|+++ |.++....
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 9988843322 23678899999997 99887643
No 336
>PRK08643 acetoin reductase; Validated
Probab=95.11 E-value=0.11 Score=46.27 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhc--CCC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg 256 (371)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+... . .|..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999988 9999999999888999 8988888776543332 223221 1 22222 122223233322 137
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 337
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.11 E-value=0.12 Score=45.98 Aligned_cols=79 Identities=22% Similarity=0.324 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+.+++.+. ..+.+++.+... . .|-.+ ..+....+.+... +.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 4689999988 8999999999988999 7887765432 223333444322 1 22222 1223333333222 379
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 338
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.11 E-value=0.38 Score=39.81 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=57.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|-++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.|+.. .+ +..+.+. ..|+||-|+.+.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~~------s~~e~~~-----~~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEV-AD------SPAEAAE-----QADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEE-ES------SHHHHHH-----HBSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhh-hh------hhhhHhh-----cccceEeecccc
Confidence 368889999999998888888899 8999999999988887777432 21 1222222 268999988886
Q ss_pred HHHHHHHH------HhccCCceEEEEcc
Q 017431 268 SVMRAALE------CCHKGWGTSVIVGV 289 (371)
Q Consensus 268 ~~~~~~~~------~l~~~~G~iv~~g~ 289 (371)
...+..+. .+.++ ..+|.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 65555444 34453 55565544
No 339
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.09 E-value=0.13 Score=46.46 Aligned_cols=91 Identities=20% Similarity=0.153 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC---cEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV---TEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~---~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
..++++++|+|+|++|.+.+..+...|+ +|+++++++++.+ +++++.. ...+. ..+ .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccE
Confidence 3557899999999999998888888898 8999888877654 4444322 11111 111 11126899
Q ss_pred EEEccCCHH--HH---HHHHHHhccCCceEEEE
Q 017431 260 SFECIGNVS--VM---RAALECCHKGWGTSVIV 287 (371)
Q Consensus 260 vid~~g~~~--~~---~~~~~~l~~~~G~iv~~ 287 (371)
+++|++... .. ......++++ ..++++
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~ 213 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDM 213 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 999988621 01 1123446664 666666
No 340
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.08 E-value=0.11 Score=53.34 Aligned_cols=76 Identities=25% Similarity=0.347 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCcEEecCCC-CC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKD-HD 242 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~---------------------~~~~~~~~g~~~vi~~~~-~~ 242 (371)
..+++|+|+|+|+.|++++..+..+|+ +|++++..+. ..+.++++|++...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 368899999999999999999999999 7888876542 345566777644332211 00
Q ss_pred chHHHHHHhhcCCCccEEEEccCC
Q 017431 243 KPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 243 ~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
....+ +. .++|.+|.++|.
T Consensus 404 i~~~~-~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLES-LL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHHH-HH----hcCCEEEEeCCC
Confidence 11111 11 269999988886
No 341
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.08 E-value=0.11 Score=46.25 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH---HHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~---~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
.++++||+|+ |.+|.+.++.+...|+ +|+++.++++..+ ...+.+... . .|..+ .......+.+... ++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999988999 7888877632222 222333321 1 23322 1222223333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 342
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.07 E-value=0.17 Score=46.09 Aligned_cols=94 Identities=20% Similarity=0.199 Sum_probs=64.5
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHhcCCcEEecCCCCCc
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
.+||+....+..|....---.|++|+|+|. +.+|.-.+.++...|+ .|++.. ++.+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~--------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD--------------------- 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC---------------------
Confidence 455554444443333222357999999995 8999999999988999 788773 3221
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..+.+ ..+|+++-++|.+..++..+ +++| ..+|.+|..
T Consensus 195 -l~e~~-----~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 195 -LPAVC-----RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred -HHHHH-----hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 11111 14899999999988766655 7886 888888874
No 343
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.12 Score=46.69 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC--c-EE--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--T-EF--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~--~-~v--i~~~~~~~~~~~~~~~~~~- 254 (371)
.++++||+|+ |.+|.+.+..+...|+ +|++++++.++.+.+. +.+. . .+ .|..+ ...+.. +.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHh
Confidence 3578999988 9999999988888899 8888888776554332 2221 1 11 23333 122322 333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998774
No 344
>PLN02253 xanthoxin dehydrogenase
Probab=95.04 E-value=0.11 Score=47.05 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC--c-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~--~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
.++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+ +..+++. . .. .|..+ .....+.+.+... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4689999988 9999998888888899 8888887765443 3333322 1 11 23332 1222222332222 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998864
No 345
>PRK07574 formate dehydrogenase; Provisional
Probab=95.04 E-value=0.23 Score=47.21 Aligned_cols=91 Identities=18% Similarity=0.148 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++.....+..+.++... + .++.+.+. ..|+|+.++
T Consensus 190 L~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~l~ell~-----~aDvV~l~l 256 (385)
T PRK07574 190 LEGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VSFDSLVS-----VCDVVTIHC 256 (385)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CCHHHHhh-----cCCEEEEcC
Confidence 367899999999999999999999999 9999988764444444454321 0 11222221 367666655
Q ss_pred CC-HHH---H-HHHHHHhccCCceEEEEcc
Q 017431 265 GN-VSV---M-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~-~~~---~-~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +++ + ...+..|+++ ..+|.++.
T Consensus 257 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 285 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRG-SYLVNTAR 285 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCC-cEEEECCC
Confidence 53 111 1 3345556664 66665543
No 346
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.04 E-value=0.38 Score=42.51 Aligned_cols=102 Identities=18% Similarity=0.150 Sum_probs=59.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhH----HHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~-~~~~----~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+.+|||+|+ |.+|.+.+.-+...|+ +|+.+.++ .++. ..+++.+... . .|..+ .......+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 579999988 8999998888888999 66655432 2222 1223333321 1 23222 1222222333221 3
Q ss_pred CccEEEEccCC----------H---------------HHHHHHHHHhccCCceEEEEccCC
Q 017431 256 GVDYSFECIGN----------V---------------SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 256 g~dvvid~~g~----------~---------------~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
++|++|++.|. . ...+.+.+.+... |+++.+++..
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 78999998873 1 1244556666775 8999987743
No 347
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.04 E-value=0.13 Score=46.40 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=84.8
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC---------CchHHHHHHh
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---------DKPIQQVLVD 251 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~---------~~~~~~~~~~ 251 (371)
.++..++.++|+.|+|..|++++..++..|+ .|...+....+.+..+.+|+...-...+. ..+|...-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3455677899999999999999999999999 78887777777777777776432111110 2334433333
Q ss_pred hcC---CCccEEEEccCC-----HH-HHHHHHHHhccCCceEEEEccCCC-CCcccccchheee-ceEEEeee
Q 017431 252 LTD---GGVDYSFECIGN-----VS-VMRAALECCHKGWGTSVIVGVAAS-GQEISTRPFQLVT-GRVWKGTA 313 (371)
Q Consensus 252 ~~~---gg~dvvid~~g~-----~~-~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~-~~~~~g~~ 313 (371)
+.. .++|+||-+.-- |. ........|++| ..+|++..... +...+-+.....+ +.++.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 222 289999986532 12 357788899997 99999966432 2333333322223 77777754
No 348
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.11 Score=45.55 Aligned_cols=74 Identities=23% Similarity=0.245 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhcCC-CccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~g-g~dvvid 262 (371)
.++++||+|+ |.+|...++.+...|+ +|+++.++.++ .+... ...|..+ .....+.+.+.... +.|++++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 3578999988 9999999998888998 89888887654 11111 1223333 12233334433333 6899999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 349
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.01 E-value=0.13 Score=47.74 Aligned_cols=78 Identities=21% Similarity=0.217 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC---Cc-EE--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VT-EF--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g---~~-~v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+ .++. .. .. .|..+ .......+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999988 9999999988888898 899888887765433 3332 11 11 23322 122222222221 23
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
.+|++++++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 350
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.14 Score=47.09 Aligned_cols=79 Identities=19% Similarity=0.216 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCc-EE--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT-EF--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~-----g~~-~v--i~~~~~~~~~~~~~~~~~~- 254 (371)
.+++|||+|+ |++|.+.++.+...|+ +|+.+.++.++.+.+ +++ +.. .. .|..+ .......+.+...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5689999988 9999999888888899 888888877654322 121 111 11 23322 1222233333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 369999998873
No 351
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.00 E-value=0.75 Score=35.34 Aligned_cols=92 Identities=20% Similarity=0.203 Sum_probs=60.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHH
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 269 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~ 269 (371)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+- .-.+.+++..-..++.++-+++....
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hhhhHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999999665 899999999999999888854 333222 11233444422389999988887543
Q ss_pred H---HHHHHHhccCCceEEEE
Q 017431 270 M---RAALECCHKGWGTSVIV 287 (371)
Q Consensus 270 ~---~~~~~~l~~~~G~iv~~ 287 (371)
- -..++.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 2 2333444554 565544
No 352
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.00 E-value=0.18 Score=44.84 Aligned_cols=36 Identities=33% Similarity=0.456 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
...+|+|+|+|++|..++..+...|.++++.++.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 457999999999999999999999998999887654
No 353
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.99 E-value=0.15 Score=41.70 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE-EecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.++.+|+|+|+|.+|...++.+...|..+|++++++.++.+ ++++++... ..... +..+. -.++|+++.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 45789999999999999998888887448999988877655 445555421 01111 11111 136999999
Q ss_pred ccCCH
Q 017431 263 CIGNV 267 (371)
Q Consensus 263 ~~g~~ 267 (371)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98873
No 354
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.99 E-value=0.13 Score=46.48 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc------EEecCCCC--CchHHHHHHh
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT------EFVNPKDH--DKPIQQVLVD 251 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~------~vi~~~~~--~~~~~~~~~~ 251 (371)
-+|+++||+|+ .++|.+.+..+-..|+ +|+.+.+++++.+...+ .+.. ...|..+. .....+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46789999987 8999999999999999 99999998887554332 2221 12222220 1122223333
Q ss_pred hcCCCccEEEEccCC
Q 017431 252 LTDGGVDYSFECIGN 266 (371)
Q Consensus 252 ~~~gg~dvvid~~g~ 266 (371)
...|+.|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334589999997775
No 355
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.96 E-value=0.28 Score=43.18 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=71.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcC
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
....+..+|++||=+|+| .|-.|..+++..|-..|+++|.++.-++.+++. |... +.... .+. +.+ -..+
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~dA-e~L-Pf~D 117 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GDA-ENL-PFPD 117 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--ech-hhC-CCCC
Confidence 344556689999988665 688899999999866999999999877777642 2221 11000 110 111 1112
Q ss_pred CCccEEEEccCC------HHHHHHHHHHhccCCceEEEEccCC
Q 017431 255 GGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..||++..+.|- +.++++..+.|.|+ |+++.+....
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 278988876653 45699999999997 9999887654
No 356
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.95 E-value=0.12 Score=45.55 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhcCCcE-Ee--cCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~----~~~~g~~~-vi--~~~~~~~~~~~~~~~~~~--g 255 (371)
.+++|||+|+ |.+|...+..+...|+ +|++++++.++... +++.+... ++ |..+ .......+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999988 9999999988888899 89999888654332 22333221 12 2222 1222333332221 2
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.+.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998754
No 357
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.94 E-value=0.15 Score=45.45 Aligned_cols=79 Identities=19% Similarity=0.347 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .......+.+... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999998888888899 899998887654322 2334322 1 23222 1233333333322 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|.++++.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 358
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.14 Score=46.22 Aligned_cols=78 Identities=24% Similarity=0.366 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---C--Cc-EEe--cCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---G--VT-EFV--NPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g--~~-~vi--~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.. .++ + .. .++ |..+ .......+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999988 9999999999999999 899988876654322 222 1 11 122 2222 1223233333222
Q ss_pred -CCccEEEEccC
Q 017431 255 -GGVDYSFECIG 265 (371)
Q Consensus 255 -gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 37899999887
No 359
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.15 Score=45.32 Aligned_cols=78 Identities=27% Similarity=0.354 Sum_probs=48.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCc--EE--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--EF--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~--~v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ .++... .. .|..+ .......+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999988 9999998888888899 888888887765433 333211 11 22222 1222222332221 3699
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99998874
No 360
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.92 E-value=0.27 Score=43.53 Aligned_cols=74 Identities=30% Similarity=0.301 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++. ....+... . .|..+ ...+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999988 8999999998888899 888887765 12222211 1 22222 1223333333221 36899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998875
No 361
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.92 E-value=0.2 Score=45.31 Aligned_cols=94 Identities=19% Similarity=0.199 Sum_probs=63.8
Q ss_pred hccccchhhhhhhhhcCCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 166 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
.+||+....+..| +..++ -.|++|+|+|.| .+|.-...++...|+ .|+.+.+.. .
T Consensus 136 ~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t---------------------~ 192 (285)
T PRK14191 136 FVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT---------------------K 192 (285)
T ss_pred CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc---------------------H
Confidence 3455554444433 43343 469999999996 899999999999999 777663211 1
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.+.++ .+|+++-++|.+..+. -..++++ ..++.+|..
T Consensus 193 ~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 193 DLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 2222222 4899999999987544 3467886 889999864
No 362
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.92 E-value=0.14 Score=46.35 Aligned_cols=78 Identities=23% Similarity=0.330 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ ++ .+... . .|..+ .......+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999999889999 888888876654322 22 23221 1 22222 1222222332222 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
.+|++++++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 363
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.91 E-value=0.87 Score=33.67 Aligned_cols=85 Identities=22% Similarity=0.314 Sum_probs=54.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAG---ASRVI-GIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g---~~~v~-~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+|.|+|+|.+|.+.+.-....| . +|+ +.++++++.+.+ ++++..... .+..+.+. ..|++|-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 5778899999999998888888 6 777 448888877655 566643221 12333333 38999999
Q ss_pred cCCHHHHHHHHHH---hccCCceEEEE
Q 017431 264 IGNVSVMRAALEC---CHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~~~~~~~~---l~~~~G~iv~~ 287 (371)
+.... +...++. ..++ ..+|.+
T Consensus 69 v~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred ECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 98744 4444444 3453 555554
No 364
>PLN02823 spermine synthase
Probab=94.91 E-value=0.24 Score=46.11 Aligned_cols=99 Identities=19% Similarity=0.132 Sum_probs=61.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EEecCCCC---CchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~vi~~~~~---~~~~~~~~~~~~~gg~dvv 260 (371)
..++|||+|.| -|..+..+++..+..+|++++.+++-.++++++-.. ..+..... -.+....+. ...+.+|+|
T Consensus 103 ~pk~VLiiGgG-~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGG-EGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFDVI 180 (336)
T ss_pred CCCEEEEECCC-chHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCccEE
Confidence 34789999886 345556777777777999999999999988864321 01110000 122223332 233489988
Q ss_pred E-EccC-----------CHHHHH-HHHHHhccCCceEEEE
Q 017431 261 F-ECIG-----------NVSVMR-AALECCHKGWGTSVIV 287 (371)
Q Consensus 261 i-d~~g-----------~~~~~~-~~~~~l~~~~G~iv~~ 287 (371)
| |... +.+.++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 8 4321 123455 788899997 998765
No 365
>PRK06720 hypothetical protein; Provisional
Probab=94.90 E-value=0.18 Score=42.06 Aligned_cols=38 Identities=32% Similarity=0.281 Sum_probs=31.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
++++++|+|+ +++|.+.+..+...|+ +|+.++++++..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 5789999988 8899998888888898 898888776544
No 366
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.88 E-value=0.32 Score=44.05 Aligned_cols=97 Identities=18% Similarity=0.175 Sum_probs=64.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cEE-e-cCCCC--CchHHHHHHhhcCCCccEEE-
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEF-V-NPKDH--DKPIQQVLVDLTDGGVDYSF- 261 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~v-i-~~~~~--~~~~~~~~~~~~~gg~dvvi- 261 (371)
++|||+|.| -|-.+=.++++...+++++++.+++=.++++++-. ... . |++-. -.+-.+.+++.. .+||+||
T Consensus 78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~-~~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCE-EKFDVIIV 155 (282)
T ss_pred CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCC-CcCCEEEE
Confidence 599999765 35556678888888899999999998898887432 110 0 11100 012223333332 2799888
Q ss_pred EccCC---------HHHHHHHHHHhccCCceEEEE
Q 017431 262 ECIGN---------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 262 d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+... .+..+.+-++|+++ |.++..
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 55444 56789999999997 999877
No 367
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.88 E-value=0.15 Score=45.20 Aligned_cols=76 Identities=20% Similarity=0.337 Sum_probs=49.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE---ecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
+|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+. .++.... .|..+ .....+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899988 9999999999988999 8999988887665443 3443221 23222 1223333333222 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98764
No 368
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.87 E-value=0.15 Score=45.35 Aligned_cols=79 Identities=28% Similarity=0.402 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE-E--ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +++... . .|..+ .......+.+.. .+.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3678999988 9999999999988999 8999988887655433 343221 1 22222 122223232221 13689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.+.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
No 369
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.16 Score=44.85 Aligned_cols=77 Identities=18% Similarity=0.328 Sum_probs=48.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----c--CCc-EE--ecCCCCCchHHHHHHhhcC--
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVT-EF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~--g~~-~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ . +.. ++ .|..+ .....+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 468999988 9999998888778898 88888888776543321 1 211 11 23333 1233333333322
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999886
No 370
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.86 E-value=0.23 Score=44.08 Aligned_cols=102 Identities=17% Similarity=0.289 Sum_probs=65.6
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhc--
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~-- 253 (371)
..+....++||=+|.+ +|..++.+|+.++- .+|+.++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~ 150 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIED 150 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhc
Confidence 3445556789988884 68888889988742 28999999998777664 455433222222 33444454543
Q ss_pred ---CCCccEEEEccCC---HHHHHHHHHHhccCCceEEE
Q 017431 254 ---DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 254 ---~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~ 286 (371)
.+.||+||--... ...++.+++.|++| |.++.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 1479988843332 34578889999996 77653
No 371
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.82 E-value=0.24 Score=46.26 Aligned_cols=38 Identities=32% Similarity=0.482 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+.
T Consensus 148 L~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 148 VYGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 368999999999999999999999999 89999876543
No 372
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.81 E-value=0.17 Score=44.91 Aligned_cols=79 Identities=20% Similarity=0.319 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ .+ .+... . .|..+ .......+.+.. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999988888999 888888887654322 22 23221 1 22222 122222232221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 373
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.80 E-value=0.8 Score=41.65 Aligned_cols=59 Identities=24% Similarity=0.387 Sum_probs=44.4
Q ss_pred hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE---cCChhhHHHHHhcCCcEEecCC
Q 017431 179 WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI---DIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v---~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
...+.+++|.+| |-++ |..|++...+|+.+|+ +++.+ ..+.+|.++++.+|+.-++...
T Consensus 54 e~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 456779999844 4455 8999999999999999 55554 3366888999999996655444
No 374
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.80 E-value=0.32 Score=42.29 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEe---------cCCCCCchHHHHHHhhc-
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---------NPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi---------~~~~~~~~~~~~~~~~~- 253 (371)
.++.+||+.|+| .|.-++.+|. .|. .|++++.++...+.+ ++.+..... ..... .-+...+.+..
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~ 108 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNI-EIFCGDFFALTA 108 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCce-EEEEccCCCCCc
Confidence 567799999886 5777778875 699 899999999877764 333321000 00000 00000011111
Q ss_pred --CCCccEEEEccCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017431 254 --DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 --~gg~dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+.||.++|+..- +..++.+.++|+++ |+++.++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1368999996531 34578999999997 98766654
No 375
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.79 E-value=0.23 Score=44.85 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=64.7
Q ss_pred hccccchhhhhhhhhcCCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 166 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
..||+....+..| +..++ -.|++|+|+|-| .+|.-...++...|+ .|+.+.+.. .
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------~ 194 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------K 194 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC---------------------C
Confidence 3455555444433 33333 469999999985 599999999999999 777774321 1
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.+.++ .+|+++.++|.+..+.. ..++++ ..++.+|..
T Consensus 195 ~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2222222 49999999999875543 778886 888999854
No 376
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.79 E-value=0.02 Score=46.64 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=56.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC----CchHHHHHHhhcCCCccEEEEccC
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~----~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
|+|+|+|++|......++..|. .|..+.+.+ +.+.+++.|........+. ....... ....+.+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877899 899998888 7776766554221111000 0000000 011137999999887
Q ss_pred CHH---HHHHHHHHhccCCceEEEEcc
Q 017431 266 NVS---VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~~~---~~~~~~~~l~~~~G~iv~~g~ 289 (371)
..+ .++.+...+.+. ..++.+.+
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeC
Confidence 633 234444444553 56776644
No 377
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.77 E-value=0.23 Score=45.29 Aligned_cols=95 Identities=19% Similarity=0.198 Sum_probs=65.6
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+....+..|....---.|++|.|+|. +.+|.-...++...|+ .|++..+... +
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------~ 195 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------D 195 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------C
Confidence 455554444443333322357999999999 5999999999999999 8888754322 1
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..+..+ .+|+++-++|.+..+...+ ++++ ..+|.+|..
T Consensus 196 l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 196 AKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred HHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 111111 4899999999988776655 8886 888888864
No 378
>PLN03139 formate dehydrogenase; Provisional
Probab=94.77 E-value=0.28 Score=46.64 Aligned_cols=47 Identities=19% Similarity=0.200 Sum_probs=37.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++.....+..++.|+
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 468899999999999999999999999 89998876544444445554
No 379
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.75 E-value=0.2 Score=44.83 Aligned_cols=78 Identities=19% Similarity=0.297 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ .+.|.... .|..+ .....+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 4 799998888878899 788877664222222 23343322 33333 1233333333222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|+++++.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 37999998776
No 380
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.75 E-value=0.3 Score=39.34 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
+|+|+|+|++|...+..+...|.++++.++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999899999765
No 381
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.75 E-value=0.39 Score=42.99 Aligned_cols=97 Identities=21% Similarity=0.281 Sum_probs=64.4
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhcC-CCc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTD-GGV 257 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~-gg~ 257 (371)
....+.++++||=+|+| .|..+..+++..+..+|++++.+++-.+.+++.... .++.. + . ..... ..+
T Consensus 25 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-d----~----~~~~~~~~f 94 (258)
T PRK01683 25 ARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-D----I----ASWQPPQAL 94 (258)
T ss_pred hhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-c----h----hccCCCCCc
Confidence 44556788999988885 456677888776544999999999888777654321 12211 1 1 11112 279
Q ss_pred cEEEEccC-----C-HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSFECIG-----N-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+|+.... . ...+..+.+.|+++ |.++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 99986433 1 35688899999997 998875
No 382
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.74 E-value=0.18 Score=44.44 Aligned_cols=79 Identities=23% Similarity=0.214 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE-E--ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
++.++||+|+ |.+|...+..+...|+ .|+..+++.++.+.+ .+++... + .|..+ .....+.+.+.. -+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4679999988 9999998888888898 788877776655433 3344322 1 22222 122222222221 13799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99998874
No 383
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.71 E-value=0.17 Score=45.13 Aligned_cols=76 Identities=24% Similarity=0.310 Sum_probs=47.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcEE--ecCCCCCchHHHHHHhhc--CCCccE
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY 259 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~v--i~~~~~~~~~~~~~~~~~--~gg~dv 259 (371)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ .+ .+.... .|..+ .....+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899988 8999998888888899 899988887664432 22 232222 23222 122333333322 237999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 384
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.70 E-value=0.2 Score=45.29 Aligned_cols=102 Identities=14% Similarity=0.274 Sum_probs=64.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHH-HHHhcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~-~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+.++++ +.+ ..++++.... .|..+ .......+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4689999987 4899998888888999 8888877742 222 2234553322 33333 1223333333322
Q ss_pred CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+|+++++.|.. ...+.++..|..+ |+++.+++.
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 4799999988731 1245566677775 999988764
No 385
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.70 E-value=0.17 Score=44.56 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-Ee--cCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~~~~~~--g 255 (371)
.+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ +..+... .+ |..+ .....+.+.+... +
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999988 8999999988888999 899998887654322 2233222 12 2222 1223333333221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|++.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998864
No 386
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.69 E-value=0.2 Score=45.08 Aligned_cols=80 Identities=21% Similarity=0.306 Sum_probs=49.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhcCCcE--EecCCCCCchHHHHHHhhcC--C
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~----~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~--g 255 (371)
-+|+.|||+|+ +++|.+.++=.-..|+ +++..+.+.+ ..+.+++.|-.+ ..|-.+ .++..+...+... |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 46899999988 7999886666666688 7878777664 334445445212 233333 2333333333222 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++|.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998775
No 387
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.68 E-value=0.16 Score=45.35 Aligned_cols=78 Identities=21% Similarity=0.310 Sum_probs=48.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh----cCC--cEEe--cCCCCCchHHHHHHhhcC--
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN----FGV--TEFV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~----~g~--~~vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++|||+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+ .+ .+. .+.+ |..+ .......+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 468999988 8999999988888899 888888877654322 22 221 1122 2222 1222223333221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 378999998873
No 388
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.68 E-value=0.31 Score=46.65 Aligned_cols=106 Identities=19% Similarity=0.294 Sum_probs=61.6
Q ss_pred CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHhc-CCcEE-ecCCCCCchHHHHHHh
Q 017431 182 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 182 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-------~~~~~-g~~~v-i~~~~~~~~~~~~~~~ 251 (371)
.....+.+|||+|+ |.+|...+..+...|+ +|++++++..+.+ ..... ++..+ .|..+ ...+...+.+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHH
Confidence 44566789999988 9999999999888999 8888888764321 11112 22222 23333 1223333332
Q ss_pred hcCCCccEEEEccCCH------------HHHHHHHHHhcc-CCceEEEEccC
Q 017431 252 LTDGGVDYSFECIGNV------------SVMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 252 ~~~gg~dvvid~~g~~------------~~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
. +.++|+||+|++.. .....+++.+.. +-+++|.++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 2 11699999988642 012233444433 22468887654
No 389
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.66 E-value=0.16 Score=44.97 Aligned_cols=78 Identities=26% Similarity=0.359 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE-E--ecCCCCCchHHHHHHhhc--CCC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg 256 (371)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+... . .|..+ ..++...+.+.. .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 358999988 9999999988888899 89999888776554432 22211 1 23322 122333232322 136
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987764
No 390
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.18 Score=46.50 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=29.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 5789999988 8999999998888999 88888776
No 391
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.66 E-value=0.086 Score=49.52 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcC----CcE-EecCCCCCchHHHHHHhhcCC-Cc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFG----VTE-FVNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g----~~~-vi~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
+|++|||+|+ |.+|.+.++.+...|. +|+++++++.... ..+.++ ... ..|..+ .+.+.+.... ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-----AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-----HHHHHHHHhhcCC
Confidence 4689999987 9999999999999999 8888877665322 212222 111 112222 1223333333 68
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++++.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999998873
No 392
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.62 E-value=1.4 Score=38.41 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=57.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++.+|||+|+|.++.-=+..+...|+ +|+++...- +....+.+.|.-..+ ..++... .+ .++++||-|+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~------dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKE------FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChH------Hh--CCCcEEEECC
Confidence 56899999999999988888888999 777775432 222222233322222 2221111 11 2799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.+..-+...+..... +.++....
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcC
Confidence 9977555555544553 77776644
No 393
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.52 Score=41.79 Aligned_cols=38 Identities=24% Similarity=0.221 Sum_probs=29.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKF 224 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~-v~~~~~~~ 224 (371)
.+.+++|+|+ |.+|...++.+...|+ +|++ ..++.++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHH
Confidence 3579999988 9999999998888899 6655 45655543
No 394
>PRK08328 hypothetical protein; Provisional
Probab=94.58 E-value=0.25 Score=43.49 Aligned_cols=36 Identities=39% Similarity=0.461 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+.+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 347899999999999999999999999999997543
No 395
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.56 E-value=0.28 Score=45.28 Aligned_cols=89 Identities=17% Similarity=0.217 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
..|++|.|+|.|.+|...++.++.+|+ +|++.++..++.. +....... .++.+.+. ..|+|+.++
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~----~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR----EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc----ccHHHHHh-----cCCEEEECC
Confidence 367899999999999999999999999 8999877554321 11111101 12222221 367777766
Q ss_pred CCHHH-----HHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSV-----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~-----~~~~~~~l~~~~G~iv~~g~ 289 (371)
..... -...++.|+++ ..+|.+|.
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 64221 13456667775 77776654
No 396
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.54 E-value=0.33 Score=43.87 Aligned_cols=100 Identities=19% Similarity=0.119 Sum_probs=59.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EEecCCCC---CchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~vi~~~~~---~~~~~~~~~~~~~gg~dvv 260 (371)
..++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. ..++.... ..+..+.+.+ ..+.+|+|
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDvI 149 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDVI 149 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccEE
Confidence 456999998864 44555666666566899999998877776653110 00100000 0122223332 23489988
Q ss_pred EEccC----------CHHHHHHHHHHhccCCceEEEEc
Q 017431 261 FECIG----------NVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 261 id~~g----------~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.... ..+.++.+.+.|+++ |.++...
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 84222 234567889999997 9998763
No 397
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.53 E-value=0.23 Score=43.89 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-Ee--cCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+ ++.+... ++ |..+ .....+.+.+... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999999888999 888888877654433 2223211 22 2222 1222222332221 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|++|++.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 398
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.53 E-value=0.28 Score=42.09 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
...+|+|+|+|++|...+..+-.+|.++++.++.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999999999999765
No 399
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.52 E-value=0.17 Score=43.32 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=57.7
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
......++.+||-+|+| .|..++.+++ .|. .|++++.+++-.+.+++ .+........ +... ... .+
T Consensus 24 ~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~----d~~~--~~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDAY----DINA--AAL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEec----cchh--ccc-cC
Confidence 33444456788888875 4566666666 477 89999999876665543 2322111000 1100 011 23
Q ss_pred CccEEEEccC-----C---HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+|+|+.... . ...++.+.+.|+++ |.++.+.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6999986421 1 34678888899997 9865553
No 400
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.51 E-value=0.13 Score=47.44 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHH-HHHhcCCc--EEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFD-RAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~-~~g~~~v~~v~~~~~~~~-~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
....+++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+ ++.++... .+. . .+..+.+ .++|+|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av-----~~aDiV 192 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP-----EAVDLV 192 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----hcCCEE
Confidence 45678999999999999888775 468878999999987755 44444321 111 1 1233333 269999
Q ss_pred EEccCCHHHHHHHHHHhccCCceEEEEccCCC
Q 017431 261 FECIGNVSVMRAALECCHKGWGTSVIVGVAAS 292 (371)
Q Consensus 261 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~ 292 (371)
+.|+++..-+-.. .++++ -.+..+|.+.+
T Consensus 193 itaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p 221 (304)
T PRK07340 193 VTATTSRTPVYPE--AARAG-RLVVAVGAFTP 221 (304)
T ss_pred EEccCCCCceeCc--cCCCC-CEEEecCCCCC
Confidence 9988875422222 36785 78888887643
No 401
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.51 E-value=0.2 Score=47.60 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999887
No 402
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.50 E-value=0.5 Score=42.26 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=66.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc-CC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DG 255 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~-~g 255 (371)
+.......++++||=+|+|. |..+..+++.. +. +|++++.+++-.+.+++.+...+. .+. .+.. .+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~----~~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDV----RDWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cCh----hhCCCCC
Confidence 34555667889999888863 66677777775 55 899999999888888776543221 111 1112 23
Q ss_pred CccEEEEccC-----C-HHHHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.||+|+.... . ...+..+.+.|+++ |.++..
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 7999997432 2 34578889999997 998764
No 403
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.50 E-value=0.45 Score=43.46 Aligned_cols=93 Identities=20% Similarity=0.272 Sum_probs=55.6
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGLGTVGLA-VAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Gag~vG~~-ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-+|.|+|+|.+|.. +..+.+.-+.+-+.+++.+++ .+++++++|....+ .++...+....-..+|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEECC
Confidence 47889999999986 555555446634444555554 34667788864322 2233333321112699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEE
Q 017431 265 GNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+.....+.+.+++..| -.+++.
T Consensus 79 ~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 79 SAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CHHHHHHHHHHHHHcC-CeEEEC
Confidence 9865556666655553 444444
No 404
>PRK12743 oxidoreductase; Provisional
Probab=94.49 E-value=0.22 Score=44.37 Aligned_cols=78 Identities=19% Similarity=0.144 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHH----HHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD----RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~----~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++||+|+ |.+|...++.+...|+ +|+.+. ++.++.+ .++..+... . .|..+ .......+.+... +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 568999988 8999999999999999 776664 3444332 223344322 2 23222 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 405
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.66 Score=41.10 Aligned_cols=104 Identities=19% Similarity=0.173 Sum_probs=59.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHH-HHH---hcCCcEE---ecCCCC--CchHHHHHHh---
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD-RAK---NFGVTEF---VNPKDH--DKPIQQVLVD--- 251 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~-~~~---~~g~~~v---i~~~~~--~~~~~~~~~~--- 251 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+. +.+++.+ ... +.+.... .|..+. -..+.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999988 8999999999989999 677653 4434332 222 2232211 122221 0112222222
Q ss_pred -hcC-CCccEEEEccCCH----------H---------------HHHHHHHHhccCCceEEEEccCC
Q 017431 252 -LTD-GGVDYSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 252 -~~~-gg~dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+ +++|+++++.|.. + +.+.++..+... |++|.+++..
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 112 2799999988731 0 133456666775 9999987653
No 406
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.43 E-value=0.21 Score=51.38 Aligned_cols=114 Identities=23% Similarity=0.334 Sum_probs=69.4
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~ 218 (371)
+...|..+++...+.+ +..+.+++=.-..+ ....-.++++||+|+ |++|.+.++.+...|+ +|++++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~ 445 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLAD 445 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEe
Confidence 4466777777777777 66666666432111 011224789999988 9999999988888899 899998
Q ss_pred CChhhHHHHH-h----cCCcE----EecCCCCCchHHHHHHhhc--CCCccEEEEccCC
Q 017431 219 IDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN 266 (371)
Q Consensus 219 ~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~~~~~~--~gg~dvvid~~g~ 266 (371)
++.++.+.+. + .+... ..|..+ .......+.+.. -+++|++++++|.
T Consensus 446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8876554332 2 23211 123222 122333333322 2379999998874
No 407
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.41 E-value=0.26 Score=41.34 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+|+|+|+|++|...++.+-..|.++++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999988889998899998775
No 408
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.41 E-value=0.34 Score=45.70 Aligned_cols=79 Identities=24% Similarity=0.275 Sum_probs=46.1
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHHHhcCCcE-Ee--cCCCCC
Q 017431 185 EPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDPK--K--------------FDRAKNFGVTE-FV--NPKDHD 242 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~--ai~la~~~g~~~v~~v~~~~~--~--------------~~~~~~~g~~~-vi--~~~~~~ 242 (371)
..++++||+|+ +++|++ ..+.+ ..|+ ++++++...+ + .+.+++.|... .+ |..+ +
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-D 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-H
Confidence 44689999988 899999 34555 7899 7777753221 1 23455666532 22 2222 1
Q ss_pred chHH---HHHHhhcCCCccEEEEccCCH
Q 017431 243 KPIQ---QVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 243 ~~~~---~~~~~~~~gg~dvvid~~g~~ 267 (371)
.... +.+.+.. |++|+++++++.+
T Consensus 116 E~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 2222 2233322 4799999988875
No 409
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.40 E-value=0.25 Score=44.95 Aligned_cols=36 Identities=42% Similarity=0.459 Sum_probs=29.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-+++++||+|+ +++|.+.++.+...|+ +|+.++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 35789999988 8999998888888899 777776543
No 410
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.39 E-value=0.29 Score=44.24 Aligned_cols=104 Identities=20% Similarity=0.318 Sum_probs=62.0
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHH-HHHhcCCcEE--ecCCCCCchHHHHHHhhcC
Q 017431 184 VEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEF--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 184 ~~~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~-~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~ 254 (371)
.-.++++||+|+ +++|.+.+..+...|+ +|+.+.++++ +.+ +.++++.... .|..+ ..+....+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHH
Confidence 345789999987 4899998888888999 7887766532 222 2334453222 23222 1222223333222
Q ss_pred --CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 --GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 --gg~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+|+++++.|.. .+.+.++..+..+ |+++.+++.
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~Iv~iss~ 150 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG-GSILTLTYY 150 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-ceEEEEecc
Confidence 3799999987621 1233445556675 999888654
No 411
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.38 E-value=0.25 Score=44.30 Aligned_cols=79 Identities=22% Similarity=0.342 Sum_probs=47.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+.++..+.++ +.+.... .|..+ ..+....+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 5789999984 5899998888888999 7887765543333332 2343222 23222 1223333333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999998764
No 412
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.36 E-value=0.43 Score=43.35 Aligned_cols=88 Identities=24% Similarity=0.355 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCChhh--HHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Gag~vG~~a-i~la~~~g~~~v~~v~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|.|+|+|.+|... ..+.+.-+.+-+.+++.++++ .++++++|....+. ++...+.+ ..+|+||++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~~---~dIDaV~iaTp 73 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLAN---PDIDIVFDATS 73 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhcC---CCCCEEEECCC
Confidence 68899999999854 566665567333345555554 45677888754331 22222221 27999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEE
Q 017431 266 NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.....+.+..++.. |..|..
T Consensus 74 ~~~H~e~a~~al~a--Gk~VId 93 (285)
T TIGR03215 74 AKAHARHARLLAEL--GKIVID 93 (285)
T ss_pred cHHHHHHHHHHHHc--CCEEEE
Confidence 96656666766666 454444
No 413
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.35 E-value=0.14 Score=44.36 Aligned_cols=98 Identities=23% Similarity=0.219 Sum_probs=61.3
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE-ecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v-i~~~~~~~~~~~~~~~~~ 253 (371)
.....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.++ +++...+ +...+ .. ....
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d----~~---~~~~ 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD----GW---KGWP 140 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC----cc---cCCC
Confidence 4556788999999998852 44445566553 3 8999999887665554 3344321 11111 10 0111
Q ss_pred C-CCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 D-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. +.||+|+....-....+...+.|+++ |+++..
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 1 37998886555556677888999997 998754
No 414
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.21 Score=45.09 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=30.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4679999988 9999999988888899 8888877653
No 415
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.32 E-value=0.086 Score=46.76 Aligned_cols=106 Identities=19% Similarity=0.280 Sum_probs=65.2
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcCCcE--EecCCCC-CchHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDH-DKPIQQVL 249 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~-~~~~~~~~ 249 (371)
+....++.||++||=.|+| .|-++..+++..| -.+|+..+..+++.+.++ ..|... .+...+. ...+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 4567889999999987664 3556667777666 348999999999877664 355532 2222221 1111
Q ss_pred HhhcCCCccEEE-EccCCHHHHHHHHHHh-ccCCceEEEEcc
Q 017431 250 VDLTDGGVDYSF-ECIGNVSVMRAALECC-HKGWGTSVIVGV 289 (371)
Q Consensus 250 ~~~~~gg~dvvi-d~~g~~~~~~~~~~~l-~~~~G~iv~~g~ 289 (371)
.+-.+..+|.|| |--.....+..+.+.| +++ |+++.+..
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 111123689666 7665566899999999 886 99998854
No 416
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.32 E-value=0.26 Score=43.81 Aligned_cols=101 Identities=20% Similarity=0.151 Sum_probs=59.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc--CCcEE-ecCCCCCchHHHHHHhhcCCCccEE
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF--GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~--g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
..+.+|||+|+ |.+|...+..+...|+ +|+++.++.++....... ++..+ .|..+ . ...+.+....++|++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~--~~~l~~~~~~~~d~v 89 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G--SDKLVEAIGDDSDAV 89 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C--HHHHHHHhhcCCCEE
Confidence 34679999998 9999999988888898 888888877654332211 12111 23322 1 122222221269999
Q ss_pred EEccCCHH-------------HHHHHHHHhcc-CCceEEEEccC
Q 017431 261 FECIGNVS-------------VMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 261 id~~g~~~-------------~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
|.+.|... ....+++.+.. +.+++|.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 98876411 13344454443 22678887664
No 417
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.35 Score=42.63 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=31.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
++++|+|+ |.+|...++.+...|+ +|+++++++++.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~ 39 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLE 39 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHH
Confidence 57999987 9999999998888899 8999988887654
No 418
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.30 E-value=0.26 Score=44.19 Aligned_cols=79 Identities=23% Similarity=0.424 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ +.+|.+.+..+...|+ +|+.+.+++++.+.+ ++.+.... .|..+ .....+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5689999988 8999998888888899 788888877654322 23343221 22222 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 419
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.27 E-value=0.2 Score=40.06 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=29.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
..+|+|.|+|++|...+..+-..|.++++.+|.+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999988888888999999997654
No 420
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.27 E-value=0.49 Score=41.29 Aligned_cols=100 Identities=19% Similarity=0.204 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEe---------cCCCCCchHHHHHHhh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---------NPKDHDKPIQQVLVDL 252 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi---------~~~~~~~~~~~~~~~~ 252 (371)
.+.++.+||+.|+| .|.-++.||. .|+ .|++++.++...+.+ ++.+..... ..... .-+...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v-~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEI-TIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCce-EEEECcccCC
Confidence 44567899999886 5677777775 699 899999999877754 333332100 00000 0000001111
Q ss_pred c--C-CCccEEEEccC--------CHHHHHHHHHHhccCCceEEEE
Q 017431 253 T--D-GGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 253 ~--~-gg~dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. . +.||.|+|..- ....+..+.+.|+++ |+++.+
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1 1 26899998553 134588889999997 875544
No 421
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.23 E-value=0.4 Score=42.13 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
..+|+|+|+|++|...+..+..+|.++++.+|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 57999999999999999999999999999886544
No 422
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.18 Score=44.90 Aligned_cols=75 Identities=24% Similarity=0.202 Sum_probs=46.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhc--CCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~--~gg~dvvi 261 (371)
+|+++||+|+ |++|.+.++.+...|+ +|++++++.+.. . .-.... ..|..+ .....+.+.+.. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999988 9999999998888899 888888765431 1 101111 122222 122222222221 13699999
Q ss_pred EccC
Q 017431 262 ECIG 265 (371)
Q Consensus 262 d~~g 265 (371)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 423
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.21 E-value=0.43 Score=43.32 Aligned_cols=88 Identities=16% Similarity=0.230 Sum_probs=57.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|.... .. ... +.+ ..+|+||-|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~--~~~-~~~-----~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---AS--TDL-SLL-----KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---cc--CCH-hHh-----cCCCEEEEcCCHHH
Confidence 58899999999988888888898 89999999988888877765211 11 111 111 25899999988643
Q ss_pred H---HHHHHHHhccCCceEEEEcc
Q 017431 269 V---MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 269 ~---~~~~~~~l~~~~G~iv~~g~ 289 (371)
. ++.....+.++ ..+..+++
T Consensus 70 ~~~~~~~l~~~l~~~-~ii~d~~S 92 (279)
T PRK07417 70 LLPPSEQLIPALPPE-AIVTDVGS 92 (279)
T ss_pred HHHHHHHHHHhCCCC-cEEEeCcc
Confidence 2 23333334443 44444443
No 424
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.26 Score=44.34 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=47.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++.+.... .|..+ .....+.+.... .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899988 9999998888888899 888888877654422 22333221 12222 122222222221 13799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
No 425
>PLN02928 oxidoreductase family protein
Probab=94.19 E-value=0.44 Score=44.77 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-----cEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-----TEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-----~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++..+... ..++. ...........++.+.+. ..|+
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDi 229 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCE
Confidence 468999999999999999999999999 99999876332111 11100 000000000022333322 3788
Q ss_pred EEEccCC-HHH----HHHHHHHhccCCceEEEEcc
Q 017431 260 SFECIGN-VSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 260 vid~~g~-~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+.++.. +++ -...+..|+++ ..+|.++.
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 8876653 111 24566777775 77777654
No 426
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.14 E-value=0.22 Score=44.08 Aligned_cols=41 Identities=24% Similarity=0.250 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
...++++|||+|+ |.+|...++.+...|+ +|++++++.++.
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~ 49 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKL 49 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHH
Confidence 3457889999988 9999998888888899 888898887654
No 427
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.09 E-value=0.28 Score=43.68 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
.+++|||+|+ +.+|...+..+...|+ +++.++++.++.+.+ ++.+... . .|..+ .....+.+.+... +
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999998888999 788887776654332 2233322 1 23332 1222222322221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.+.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 428
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.06 E-value=0.31 Score=46.73 Aligned_cols=74 Identities=24% Similarity=0.305 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC-cEE--ecCCCCCchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV-TEF--VNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~-~~v--i~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
++++|+|+|+ |++|.+.+..+...|+ +|+++++++++.+.. .+.+. ... .|..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4689999988 9999999888888899 888888876654322 11111 111 22222 1 2233322 369999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 987764
No 429
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.06 E-value=0.32 Score=45.84 Aligned_cols=36 Identities=31% Similarity=0.296 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+.+|||+|+|++|..+++.+-..|.++++.++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457999999999999999999999999999998765
No 430
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.03 E-value=0.35 Score=40.38 Aligned_cols=92 Identities=22% Similarity=0.333 Sum_probs=59.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|.|+|| |-+|...++=|+..|. .|+++.++++|....+...+. .+++... .. ..+ .|+|+||++.+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~----~a---~~l--~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS----LA---SDL--AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh----hH---hhh--cCCceEEEecc
Confidence 5788888 9999999999999999 899999999987543222110 1222111 10 111 27999999887
Q ss_pred CH---------HHHHHHHHHhcc-CCceEEEEccC
Q 017431 266 NV---------SVMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 266 ~~---------~~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
.. ...+.++..|+. +--|+..+|..
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 63 124446666665 22478888764
No 431
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.00 E-value=0.37 Score=43.58 Aligned_cols=95 Identities=20% Similarity=0.197 Sum_probs=64.0
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+....+..|....---.|++|+|+|.| .+|.-...++...|+ .|+.+.+. + .+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t--~~ 194 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T--RD 194 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C--CC
Confidence 3455544444433222223479999999995 569999999999999 77775321 1 22
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+.++ .+|+++.++|.+..+.. ..++++ ..+|.+|..
T Consensus 195 l~~~~~-----~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin 232 (285)
T PRK14189 195 LAAHTR-----QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMN 232 (285)
T ss_pred HHHHhh-----hCCEEEEcCCCcCccCH--HHcCCC-CEEEEcccc
Confidence 222222 48999999999876554 778996 899999864
No 432
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.00 E-value=0.37 Score=43.30 Aligned_cols=78 Identities=19% Similarity=0.296 Sum_probs=46.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++..+.+++ .+.... .|..+ ..+....+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 57899999883 799998888888899 78877776422222322 232222 23322 1223333333222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|++++++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36999999887
No 433
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.99 E-value=0.23 Score=46.17 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=59.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
-.+++|+|+|| |.+|..+++.+. ..|+.+++.+.+++++.+.+. +++...+ .++.+.+ ..+|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-------~~l~~~l-----~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-------LSLEEAL-----PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-------HhHHHHH-----ccCCEEE
Confidence 46789999999 899998887775 457778999988877666543 3431111 1122111 1599999
Q ss_pred EccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 262 ECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+++.+.....-...+.++ -.+++++.+
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYP 248 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCC
Confidence 9988754321222445664 677777664
No 434
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.96 E-value=0.26 Score=43.53 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~-v~~~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...+..+...|+ +|+. ..++.++.+. +++.+.... .|..+ ..+....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4679999988 9999999999999999 6555 4555554322 223343222 22222 1222233333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 435
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=93.96 E-value=0.34 Score=44.24 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=46.9
Q ss_pred hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHhcCCcEEe
Q 017431 179 WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~---~~~~~~~~~~~g~~~vi 236 (371)
...+.+.||.++||-.. |.+|++..-+|...|+ +++++.. +.+|...++.||+..+.
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 35678999999999987 8899999999999999 7777744 44788889999986543
No 436
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.93 E-value=0.78 Score=42.23 Aligned_cols=86 Identities=21% Similarity=0.225 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.-+|++|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|.. +. +..+.+. ..|+|+-+
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~ll 78 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQML 78 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEe
Confidence 4468999999999999999999999999 787776655555566666652 11 1222222 48999988
Q ss_pred cCCHHH---H-HHHHHHhccCCceE
Q 017431 264 IGNVSV---M-RAALECCHKGWGTS 284 (371)
Q Consensus 264 ~g~~~~---~-~~~~~~l~~~~G~i 284 (371)
+..+.. + ...+..|+++ ..+
T Consensus 79 LPd~~t~~V~~~eil~~MK~G-aiL 102 (335)
T PRK13403 79 LPDEQQAHVYKAEVEENLREG-QML 102 (335)
T ss_pred CCChHHHHHHHHHHHhcCCCC-CEE
Confidence 876432 2 2355566674 443
No 437
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.92 E-value=0.34 Score=42.53 Aligned_cols=79 Identities=24% Similarity=0.312 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-H---HHhcCCcE-Ee--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD-R---AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~~-~---~~~~g~~~-vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+ . ++..+... .+ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999988 9999999999999999 6655555443 222 2 22223222 22 3322 1222222333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 268999998874
No 438
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.91 E-value=0.39 Score=45.46 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|||+|+|++|..++..+...|.++++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999999999999876
No 439
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.90 E-value=0.2 Score=44.86 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+. ..... ..|..+ .......+.+... +.+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4688999987 9999999999989999 88888776654321 11111 123332 1223333333221 3789999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 440
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.87 E-value=0.22 Score=49.62 Aligned_cols=71 Identities=23% Similarity=0.251 Sum_probs=47.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+ .+++.. .+...+ + .+......|++++|+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~----~----~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD----L----ENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH----h----hhhccccCeEEEecc
Confidence 46789999999999999999999999 899998887765544 455431 221111 1 111112578999877
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 54
No 441
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.86 E-value=0.81 Score=38.71 Aligned_cols=97 Identities=21% Similarity=0.278 Sum_probs=60.9
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~~ 253 (371)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++. .+ ... ..
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~-~d----~~~----~~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP-GE----API----EL 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe-cC----chh----hc
Confidence 445567888988888753 6666666766543389999999987666643 34322 221 11 111 11
Q ss_pred CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.+|+++..... ...++.+.+.|+++ |+++..
T Consensus 95 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 95 PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 2379999864321 34578889999997 998764
No 442
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=93.83 E-value=0.3 Score=43.95 Aligned_cols=103 Identities=20% Similarity=0.261 Sum_probs=66.2
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EE-ecCCCCCchHHHHHHhhcC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EF-VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v-i~~~~~~~~~~~~~~~~~~ 254 (371)
+....++.++.+||=+|+| .|..+..+++..++ +|++++.+++..+.+++.... .+ +...+ ... ....+
T Consensus 44 ~l~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D----~~~--~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSG-LGGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND----ILK--KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcCC-CChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC----ccc--CCCCC
Confidence 4456778899999988886 35556677777788 899999999877777653221 11 11111 100 01112
Q ss_pred CCccEEEEc--c---C---CHHHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFEC--I---G---NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~--~---g---~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|+.. . + ...+++.+.+.|+++ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 369999862 1 1 134678889999997 99987654
No 443
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=93.83 E-value=0.25 Score=46.57 Aligned_cols=59 Identities=25% Similarity=0.252 Sum_probs=41.5
Q ss_pred cchhhhccccchhhhhhhhhcCCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
..+|.+..+.+.+- .++ ...+. -+|.+|.|.|.|.+|..+++.+..+|+ +|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~-~a~-~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 182 RSEATGYGVFYAIR-EAL-KALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCcccceehHHHHH-HHH-HHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 34454444333333 223 33333 589999999999999999999999999 8888766655
No 444
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.81 E-value=0.32 Score=42.94 Aligned_cols=79 Identities=18% Similarity=0.227 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChh-hHHHH---HhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPK-KFDRA---KNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~-~~~~~---~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|.+.++.+...|+ +|++. .+++. ..+.+ ++.+.... .|..+ ..+..+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 4678999988 9999999999999999 66664 33332 22222 23344322 23222 1222222222221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 445
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.77 E-value=0.38 Score=39.53 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=53.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC------cEEecC-CCCCchHHHHHHhhcCCCccEEE
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV------TEFVNP-KDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~------~~vi~~-~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
+|.|+|+|..|.+....+...|. +|..-.++++..+.+++-+. ...+.. -....+..+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 58899999999999999999997 99999999887776654222 000000 00012343333 2589999
Q ss_pred EccCCHHHHHHHHHHhcc
Q 017431 262 ECIGNVSVMRAALECCHK 279 (371)
Q Consensus 262 d~~g~~~~~~~~~~~l~~ 279 (371)
-++.+. .++..++.+.+
T Consensus 75 iavPs~-~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQ-AHREVLEQLAP 91 (157)
T ss_dssp E-S-GG-GHHHHHHHHTT
T ss_pred ecccHH-HHHHHHHHHhh
Confidence 988883 36666666655
No 446
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.76 E-value=0.76 Score=36.31 Aligned_cols=90 Identities=17% Similarity=0.322 Sum_probs=54.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhcCCcEEecCCCCC-chHH----------------
Q 017431 190 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHD-KPIQ---------------- 246 (371)
Q Consensus 190 VlI~Ga-g~vG~~ai~la~~~g--~~~v~~v~~~~~~---~~~~~~~g~~~vi~~~~~~-~~~~---------------- 246 (371)
|.|+|+ |.+|..++++.+... . +|++......- .+.+++|.+..+...++.. ..+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 568898 999999999999987 5 66665444332 2355678887766544310 0111
Q ss_pred HHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccC
Q 017431 247 QVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 280 (371)
Q Consensus 247 ~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~ 280 (371)
+.+.++... .+|+++++..+-.-+.-.+..+..+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 112233332 6888888777766677777777773
No 447
>PRK04266 fibrillarin; Provisional
Probab=93.75 E-value=1.1 Score=39.23 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=60.0
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
+..++++|++||=.|+| .|..+..+++..+..+|++++.+++..+.+ ++......+..+..... ....+ ..
T Consensus 66 ~~l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~---~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE---RYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc---hhhhc-cc
Confidence 45688999999888774 233455566665534899999999765533 22211122211110000 00111 12
Q ss_pred CccEEEEccCCHH----HHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIGNVS----VMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~ 287 (371)
.+|+++.....+. +++.+.+.|+++ |+++..
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999996554432 367888899997 998874
No 448
>PLN02244 tocopherol O-methyltransferase
Probab=93.74 E-value=0.21 Score=46.80 Aligned_cols=96 Identities=22% Similarity=0.299 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhhcCCCcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
+++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .+... .+...+ ..+ ....++.||
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D----~~~--~~~~~~~FD 188 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD----ALN--QPFEDGQFD 188 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC----ccc--CCCCCCCcc
Confidence 678899888886 45667788887788 99999999987665544 23311 111111 000 011223799
Q ss_pred EEEEccCC------HHHHHHHHHHhccCCceEEEEcc
Q 017431 259 YSFECIGN------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 259 vvid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+|+..... ...+..+.+.|++| |+++....
T Consensus 189 ~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 189 LVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 99864332 34678899999997 99987643
No 449
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.73 E-value=0.27 Score=43.93 Aligned_cols=102 Identities=21% Similarity=0.299 Sum_probs=59.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh------hHHHHHhcCC-cEE--ecCCCCCchHHHHHHhhc
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK------KFDRAKNFGV-TEF--VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~------~~~~~~~~g~-~~v--i~~~~~~~~~~~~~~~~~ 253 (371)
+++++||+|+ +++|.+.+..+...|+ +|+.+.++.+ ..+.+++.+. ... .|..+ .....+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4789999986 4899998888888999 7776643322 2222222221 112 23322 122222333322
Q ss_pred C--CCccEEEEccCCH-------H----------------------HHHHHHHHhccCCceEEEEccC
Q 017431 254 D--GGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 254 ~--gg~dvvid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
. +.+|+++++.|.. . +.+.++..|..+ |+++.+++.
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 2 3799999988731 0 234566677775 999988764
No 450
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.73 E-value=0.53 Score=46.34 Aligned_cols=69 Identities=28% Similarity=0.293 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-----~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
.+++|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|+........ . ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c---------ccCCCCEE
Confidence 46799999999999999999999999 7888875542 234456677754432221 1 01257888
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+-+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 877765
No 451
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.70 E-value=0.42 Score=43.99 Aligned_cols=80 Identities=23% Similarity=0.301 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhH-HH---HHhcCCcEEecCCCC-Cc-hHHHHHHhhc-CCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKF-DR---AKNFGVTEFVNPKDH-DK-PIQQVLVDLT-DGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~-~~---~~~~g~~~vi~~~~~-~~-~~~~~~~~~~-~gg 256 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++.. ++. +. +++.|....+...+. +. ...+.+.... .+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 5689999988 8999998888888899 788876543 222 22 233343222212121 12 1222221111 247
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 452
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.66 E-value=0.65 Score=43.24 Aligned_cols=94 Identities=19% Similarity=0.110 Sum_probs=62.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cC------CCCCchHHHHHHhhcCCCccEE
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NP------KDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~------~~~~~~~~~~~~~~~~gg~dvv 260 (371)
-+|.|+|+|.+|.+....+...|. .|.+.++++++.+.+.+.+..... .. -....+..+.+ ...|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 368999999999998888888898 899999988877666543211000 00 00001222211 258999
Q ss_pred EEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 261 FECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 261 id~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+-++.+.. ++..++.++++ -.++.+..
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 99999965 78888888885 66666643
No 453
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=93.65 E-value=0.073 Score=28.17 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=15.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP 24 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~ 24 (371)
|||+++.++++ +.++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999999 99999999864
No 454
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=93.62 E-value=0.91 Score=39.26 Aligned_cols=95 Identities=18% Similarity=0.160 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|++|||+|+|.+|.-=+.+....|+ +|+++.... +....+.+.+-...+. .. +... .+ .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~----~~~~--~~--~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE----FDAE--DL--DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc----cChh--hh--cCceEEEEeC
Confidence 56899999999999999999999999 777775544 3333222222211111 11 1111 11 1489999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++.+-+...+...+. +.+|...+..
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p 106 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDP 106 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCc
Confidence 9988667777777774 8887775543
No 455
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=93.61 E-value=0.57 Score=39.56 Aligned_cols=91 Identities=18% Similarity=0.200 Sum_probs=55.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHHhhcCCCccEE
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
+++||=+|+| .|..++.+++.....+|++++.+++..+.++ +.+... ++. .+..+ + ...+.+|+|
T Consensus 43 ~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~-----~d~~~-~--~~~~~fD~I 113 (181)
T TIGR00138 43 GKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVN-----GRAED-F--QHEEQFDVI 113 (181)
T ss_pred CCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEe-----cchhh-c--cccCCccEE
Confidence 7888888874 3455555565554348999999987655543 345432 221 11211 1 112379988
Q ss_pred EEcc-CC-HHHHHHHHHHhccCCceEEEE
Q 017431 261 FECI-GN-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 261 id~~-g~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+... .. +..++.+.+.|+++ |+++..
T Consensus 114 ~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 114 TSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 8543 22 34567788889997 998866
No 456
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.60 E-value=0.55 Score=47.79 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=58.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
..+|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+. .-.+.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA---TRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC---CCHHHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999999 899999999999999988864433 211 11223433322379999999988
Q ss_pred HHH
Q 017431 267 VSV 269 (371)
Q Consensus 267 ~~~ 269 (371)
++.
T Consensus 475 ~~~ 477 (621)
T PRK03562 475 PQT 477 (621)
T ss_pred HHH
Confidence 654
No 457
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.60 E-value=0.7 Score=42.19 Aligned_cols=70 Identities=21% Similarity=0.269 Sum_probs=48.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVTE-----QADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHHh-----cCCEEEEecCCHH
Confidence 37788999999987777778898 89999999988888777765211 11112221 4788888777644
Q ss_pred HHH
Q 017431 269 VMR 271 (371)
Q Consensus 269 ~~~ 271 (371)
.+.
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 343
No 458
>PRK09135 pteridine reductase; Provisional
Probab=93.59 E-value=0.43 Score=41.98 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+++|||+|+ |.+|...+..+...|+ +|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4578999988 9999998888888899 888887753
No 459
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.59 E-value=0.41 Score=42.74 Aligned_cols=78 Identities=13% Similarity=0.188 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHh----cCCcE-E--ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~~~----~g~~~-v--i~~~~~~~~~~~~~~~~~-- 253 (371)
+++++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+ .+++ .+... . .|..+ .....+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999988 9999999988888999 7777643 444332 2222 23221 1 23332 122322233222
Q ss_pred CCCccEEEEccC
Q 017431 254 DGGVDYSFECIG 265 (371)
Q Consensus 254 ~gg~dvvid~~g 265 (371)
.+.+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 237899998875
No 460
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=93.55 E-value=0.58 Score=47.06 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=63.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
++++|.|.|.+|...++.++..|. .|++++.++++.+.+++.|...+.-... -.+.+++..-..+|.++-++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 678999999999999999999998 8999999999999999888755442211 12233333223789888777663
Q ss_pred HHH---HHHHHHhccCCceEEE
Q 017431 268 SVM---RAALECCHKGWGTSVI 286 (371)
Q Consensus 268 ~~~---~~~~~~l~~~~G~iv~ 286 (371)
... -.+.+...+. .+++.
T Consensus 493 ~~~~~iv~~~~~~~~~-~~iia 513 (558)
T PRK10669 493 YEAGEIVASAREKRPD-IEIIA 513 (558)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 322 2233444443 45443
No 461
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=93.55 E-value=0.77 Score=40.27 Aligned_cols=83 Identities=22% Similarity=0.279 Sum_probs=57.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+++|.|+|.+|...++.+...|. .|++++.++++.+.. . ++... ++.-.. .-.+.+++.--..+|+++-+++.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~---t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA---TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence 68899999999999999999999 899999999987663 3 35553 332222 12234555422389999999988
Q ss_pred HHHHHHHHHHh
Q 017431 267 VSVMRAALECC 277 (371)
Q Consensus 267 ~~~~~~~~~~l 277 (371)
.. .+..+-++
T Consensus 77 d~-~N~i~~~l 86 (225)
T COG0569 77 DE-VNSVLALL 86 (225)
T ss_pred CH-HHHHHHHH
Confidence 43 44433333
No 462
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=93.53 E-value=0.32 Score=43.26 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=61.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc----------EEecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----------EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~----------~vi~~~~~~~~~~~~~~~~~~g 255 (371)
..++|||+|.|. |..+-.+++....++|.+++.+++-.+.++++-.. +++. .+-...+++ +..
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~~~l~~-~~~ 148 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGRKFLKE-TQE 148 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHHHHHHT-SSS
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhHHHHHh-ccC
Confidence 568999998653 55566777777667999999999988888764211 1221 223333444 334
Q ss_pred -CccEEE-EccC---------CHHHHHHHHHHhccCCceEEEEc
Q 017431 256 -GVDYSF-ECIG---------NVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 -g~dvvi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+|+|+ |... +.+.++.+.++|+++ |.++.-.
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 799888 5443 246789999999997 9988764
No 463
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.50 E-value=0.4 Score=42.45 Aligned_cols=77 Identities=18% Similarity=0.258 Sum_probs=47.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+... . .|..+ .....+.+.+... +.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 47899988 9999999988889999 888888876544322 2334322 1 22222 1222222333221 268
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 464
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.50 E-value=0.41 Score=39.39 Aligned_cols=80 Identities=28% Similarity=0.369 Sum_probs=57.0
Q ss_pred CCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEecCCCC--CchHHHHHHhhcCC--CccE
Q 017431 186 PGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDG--GVDY 259 (371)
Q Consensus 186 ~g~~VlI~-Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~~~~~--~~~~~~~~~~~~~g--g~dv 259 (371)
+|-.-||+ |++++|.++...+...|+ .|+..+-... ..+.++++|..-++.+.+. .++...++...... ..|+
T Consensus 8 kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 45566888 559999999999988999 7777766554 4568889998777765543 23344444443333 6899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
.++|.|.
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999986
No 465
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.48 E-value=0.81 Score=42.43 Aligned_cols=89 Identities=24% Similarity=0.317 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE-Ec
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF-EC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi-d~ 263 (371)
-.|+++-|+|.|.+|.+.++.++..|+ +|+..++.+. .+..++++..++ ++.+.+. ..|++. .|
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell~-----~sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELLA-----ESDIISLHC 208 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHHH-----hCCEEEEeC
Confidence 458999999999999999999999999 8999988765 333344444221 1222332 267555 44
Q ss_pred cCCHHH----HHHHHHHhccCCceEEEEcc
Q 017431 264 IGNVSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
-..+++ -...++.|+++ +.+|-.+.
T Consensus 209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 444332 24566777775 77776654
No 466
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.46 E-value=0.28 Score=42.76 Aligned_cols=47 Identities=32% Similarity=0.379 Sum_probs=37.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHhcC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----------KKFDRAKNFG 231 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~----------~~~~~~~~~g 231 (371)
-.|.+|+|.|.|.+|..+++++..+|++.|.+++++. +..+..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 4689999999999999999999999995566667666 5666555544
No 467
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=93.46 E-value=0.6 Score=33.97 Aligned_cols=35 Identities=31% Similarity=0.434 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
-++++++|+|+|.+|....+.+...+..++.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999999999999886557777755
No 468
>PLN02735 carbamoyl-phosphate synthase
Probab=93.43 E-value=0.57 Score=50.87 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=59.2
Q ss_pred cccchhhhhhhhhcCCCCCCCEEEEEcCChH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 168 GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTV-----------GLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 168 ~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~v-----------G~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
..+...||.+.....+-..=++|||+|+|++ |..++.-++.+|+ .|+.+++++.....-..+ +++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~y 81 (1102)
T PLN02735 4 ADTVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTY 81 (1102)
T ss_pred cccceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEE
Confidence 3455667876544433333479999999874 4558888889999 899998877532111112 34433
Q ss_pred -cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHH
Q 017431 237 -NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 273 (371)
Q Consensus 237 -~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~ 273 (371)
.+.+ .+ .+.++... ++|.|+-+.|+...++.+
T Consensus 82 i~p~~--~e---~v~~ii~~e~~D~Iip~~gg~~gl~la 115 (1102)
T PLN02735 82 IAPMT--PE---LVEQVIAKERPDALLPTMGGQTALNLA 115 (1102)
T ss_pred eCCCC--HH---HHHHHHHHhCCCEEEECCCchhhHHHH
Confidence 2222 22 23332223 899999988874434433
No 469
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.43 E-value=0.99 Score=41.32 Aligned_cols=92 Identities=16% Similarity=0.191 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCC--chHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD--KPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|+|+|+|.+|.+....+...|. .|+.+++++++.+.+++.|... ...+.. .......... ..+|++|-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999988887777888 8999988777777666655421 000000 0000001111 369999998886
Q ss_pred HHHHHHHHHHhc----cCCceEEEE
Q 017431 267 VSVMRAALECCH----KGWGTSVIV 287 (371)
Q Consensus 267 ~~~~~~~~~~l~----~~~G~iv~~ 287 (371)
.. ++.+++.+. ++ ..++.+
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~ 99 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFL 99 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEe
Confidence 43 444444443 42 456655
No 470
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.42 E-value=1.3 Score=36.29 Aligned_cols=86 Identities=20% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++++|.|+|-|..|.+-.+=+|-.|. +|++..+..+ ..+.+++-|.. + .+..+.++ ..|+|+-.+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~-v-------~~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE-V-------MSVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E-C-------CEHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe-e-------ccHHHHHh-----hCCEEEEeC
Confidence 57899999999999999999999999 6666555555 78888888863 1 23444443 489999888
Q ss_pred CCH---HHH-HHHHHHhccCCceEEEE
Q 017431 265 GNV---SVM-RAALECCHKGWGTSVIV 287 (371)
Q Consensus 265 g~~---~~~-~~~~~~l~~~~G~iv~~ 287 (371)
... +.. +.....|.++ ....+
T Consensus 69 PD~~q~~vy~~~I~p~l~~G--~~L~f 93 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPG--ATLVF 93 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT---EEEE
T ss_pred ChHHHHHHHHHHHHhhCCCC--CEEEe
Confidence 762 222 4444567774 44444
No 471
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.39 E-value=0.94 Score=42.21 Aligned_cols=87 Identities=21% Similarity=0.205 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|.+|.|+|.|.+|...++.++..|. +|++.+++.+..... . . .. .++.+.+. ..|+|+-++
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~-~---~~---~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 144 VKNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L-T---YK---DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h-h---cc---CCHHHHHh-----cCCEEEEeC
Confidence 367899999999999999999999999 899998876532210 0 0 00 12222221 478888777
Q ss_pred CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVS-----VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~-----~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.... .....+..|+++ ..+|.++.
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 6532 134455667775 77766654
No 472
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.39 E-value=0.71 Score=37.14 Aligned_cols=95 Identities=17% Similarity=0.087 Sum_probs=62.1
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+|+........+....---.|++|+|+|. ..+|.-...++...|+ .|+.+.+... +
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------~ 64 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------Q 64 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------C
Confidence 344443333333333322357999999998 7899999999999999 8888854321 1
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+.++ .+|+++.++|.+..+. -+.+++| ..++.+|..
T Consensus 65 l~~~v~-----~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~ 102 (140)
T cd05212 65 LQSKVH-----DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPT 102 (140)
T ss_pred HHHHHh-----hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCC
Confidence 112222 4899999999876443 4558886 777777653
No 473
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.37 E-value=0.49 Score=39.91 Aligned_cols=38 Identities=39% Similarity=0.482 Sum_probs=30.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
+|.|+|+|.+|...+.++-..|+ .|+..+.+++..+.+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence 58899999999988888888899 999999999876544
No 474
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.37 E-value=0.44 Score=41.84 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=45.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+.++|||+|+ |.+|...++.+...|+ +|+++.+ +.+..+.+ ...+... . .|..+ ...+.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 3468999988 9999999999999999 5555444 33332222 2233221 1 22222 1223333322211
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37999999887
No 475
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.36 E-value=0.44 Score=42.27 Aligned_cols=77 Identities=22% Similarity=0.269 Sum_probs=46.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH-HH---HHhcCCc-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF-DR---AKNFGVT-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~-~~---~~~~g~~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++||+|+ |.+|...+..+...|+ +|+.+++... +. +. +++.+.. .+ .|..+ .......+.+... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57999988 9999999988888999 7888776432 21 12 2223322 12 23322 1223333333322 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 9999998764
No 476
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.36 E-value=0.54 Score=43.31 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=55.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCcEEecCCCCCchHHHHHHhhc---CCCccEEEEc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQVLVDLT---DGGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~~~~~~~---~gg~dvvid~ 263 (371)
-+|+|+|+|++|....-.+...|. .|+.+.+.+++.+.+++- |.. +....+. ..+. ....+ .+.+|++|-|
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~-~~~~--~~~~~~~~~~~~D~viv~ 77 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQA-SLYA--IPAETADAAEPIHRLLLA 77 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcc-eeec--cCCCCcccccccCEEEEE
Confidence 369999999999876666666788 888898887777766543 432 2111110 0000 00000 1268999987
Q ss_pred cCCHH---HHHHHHHHhccCCceEEEEc
Q 017431 264 IGNVS---VMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 264 ~g~~~---~~~~~~~~l~~~~G~iv~~g 288 (371)
+=+.+ +++.+...+.++ ..++.+-
T Consensus 78 vK~~~~~~al~~l~~~l~~~-t~vv~lQ 104 (305)
T PRK05708 78 CKAYDAEPAVASLAHRLAPG-AELLLLQ 104 (305)
T ss_pred CCHHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence 76533 234444445564 6666553
No 477
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.33 E-value=0.5 Score=42.91 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=44.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----C---CcEE--ecCCCCCchHHHHHHhhcCC-Cc
Q 017431 190 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----G---VTEF--VNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 190 VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g---~~~v--i~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
|||+|+ |.+|...++-+...+..+++.+++++.++-.++ ++ . .... ....+ -.-.+.+.+.... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigD--vrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGD--VRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTS--CCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeec--ccCHHHHHHHHhhcCC
Confidence 799987 999999888888889889999999998765543 34 1 1111 01111 2223445555555 89
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+||+++.-
T Consensus 79 diVfHaAA~ 87 (293)
T PF02719_consen 79 DIVFHAAAL 87 (293)
T ss_dssp SEEEE----
T ss_pred CEEEEChhc
Confidence 999998775
No 478
>PRK06141 ornithine cyclodeaminase; Validated
Probab=93.32 E-value=0.77 Score=42.51 Aligned_cols=94 Identities=17% Similarity=0.100 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHH-HHHhc---CCcEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFD-RAKNF---GVTEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~-~~g~~~v~~v~~~~~~~~-~~~~~---g~~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
...++|+|+|+|.+|.+.+.... ..+.++|.+..+++++.+ +++++ |.. +.... +..+.+ .++|+
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~~----~~~~av-----~~aDI 192 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVVT----DLEAAV-----RQADI 192 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEeC----CHHHHH-----hcCCE
Confidence 45688999999999999876444 467779999999888755 44444 321 11111 122222 25999
Q ss_pred EEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 260 SFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 260 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|+.++++..-+ .-.+.++++ -.+..+|..
T Consensus 193 Vi~aT~s~~pv-l~~~~l~~g-~~i~~ig~~ 221 (314)
T PRK06141 193 ISCATLSTEPL-VRGEWLKPG-THLDLVGNF 221 (314)
T ss_pred EEEeeCCCCCE-ecHHHcCCC-CEEEeeCCC
Confidence 99988874211 112567774 555556653
No 479
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.30 E-value=1.1 Score=40.02 Aligned_cols=93 Identities=24% Similarity=0.269 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.++.+||=+|+| .|..+..+++. |. +|++++.+++..+.+++ .|.. .++. .+.. .+.....+.|
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~-----~d~~-~l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH-----CAAQ-DIAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE-----cCHH-HHhhhcCCCC
Confidence 456788888875 46677777775 77 89999999988777654 2321 1121 1111 1222223479
Q ss_pred cEEEEcc-----CC-HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+|+... .. ...+..+.+.|+++ |.++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 9998532 22 34588999999997 998765
No 480
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.24 E-value=0.67 Score=47.00 Aligned_cols=94 Identities=10% Similarity=0.069 Sum_probs=66.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
..|+|.|.|.+|...++.++..|. .+++++.++++.+.+++.|...++- + ..-.+.+++..-..+|.++-++++.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-D---at~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-D---ATQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-e---CCCHHHHHhcCCccCCEEEEEeCCH
Confidence 579999999999999999999999 8999999999999999988654332 1 1112334443223899999999986
Q ss_pred HHHHHH---HHHhccCCceEEEE
Q 017431 268 SVMRAA---LECCHKGWGTSVIV 287 (371)
Q Consensus 268 ~~~~~~---~~~l~~~~G~iv~~ 287 (371)
+..... .+...+. -+++.-
T Consensus 476 ~~n~~i~~~~r~~~p~-~~IiaR 497 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILAR 497 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 543333 3444554 555543
No 481
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.24 E-value=0.5 Score=42.17 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHhcCCcE---EecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTE---FVNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~----~~~~~g~~~---vi~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+.++. +..+ .+++.+... ..|..+ .....+.+.+...
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 666665533 2222 222333321 123333 1222222322222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 482
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.23 E-value=0.55 Score=43.44 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=30.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
.|++|||+|+ |.+|...+..+...|+ +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4689999988 9999999998888899 78877666554
No 483
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.22 E-value=0.81 Score=41.22 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+.+++||+|+ |.+|.+.++.+...|+ +|+++.++.++.+.+ +..+... . .|..+ .......+.+.. -+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3468999988 9999999988888899 788887766544322 2234322 1 12222 122222232221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999998875
No 484
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.19 E-value=1.4 Score=40.79 Aligned_cols=38 Identities=26% Similarity=0.301 Sum_probs=32.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~ 226 (371)
++|.|+|+|.+|...++.+...|+ .|++.+.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 689999999999998888888899 99999998876543
No 485
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.19 E-value=0.39 Score=42.85 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=47.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hhH-HHHHhcCCc-E--EecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKF-DRAKNFGVT-E--FVNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~--~~~-~~~~~~g~~-~--vi~~~~~~~~~~~~~~~~~--~ 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.++++. +.. +..++++.. . ..|..+ .....+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4689999985 6899998888888999 888887653 322 233344321 1 123332 122222333222 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999997764
No 486
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.10 E-value=0.48 Score=41.64 Aligned_cols=78 Identities=22% Similarity=0.353 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++||+|+ |.+|...+..+...|+ +|+.+ +++.++.+.+. ..+... + .|..+ .....+.+.+... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 468999988 9999998888778899 77777 77766543222 222212 1 22222 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998764
No 487
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.07 E-value=1.3 Score=40.83 Aligned_cols=101 Identities=15% Similarity=0.114 Sum_probs=61.3
Q ss_pred hhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH---HHHhc-CC---cEEecCCCCCchHHH
Q 017431 175 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNF-GV---TEFVNPKDHDKPIQQ 247 (371)
Q Consensus 175 ~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~---~~~~~-g~---~~vi~~~~~~~~~~~ 247 (371)
|..+.......+|++||=+|+|. |..+..++.. |+..|++++.++.-.. .++++ +. ..+.. . +
T Consensus 110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~-~----~--- 179 (314)
T TIGR00452 110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP-L----G--- 179 (314)
T ss_pred HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE-C----C---
Confidence 33344555677889999998864 6666666654 7768999998885332 23332 21 11111 1 1
Q ss_pred HHHhhcCC-CccEEEEcc-----CC-HHHHHHHHHHhccCCceEEEE
Q 017431 248 VLVDLTDG-GVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 248 ~~~~~~~g-g~dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+.++... .||+|+... .+ ...+..+.++|++| |+++.-
T Consensus 180 -ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 -IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred -HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 1222222 799998642 12 24689999999997 999864
No 488
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=93.01 E-value=2.7 Score=39.05 Aligned_cols=91 Identities=23% Similarity=0.328 Sum_probs=60.3
Q ss_pred EEEEEcCChHH-HHHHHHHHHcC--CCeEEEEcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGLGTVG-LAVAEGAKAAG--ASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~vG-~~ai~la~~~g--~~~v~~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|.|+|+|.++ ..-....+..+ +..+.++++++++. ++++++|..+.+ .++.+.+.. ..+|+|+-++
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~------~~~~~ll~~---~~iD~V~Iat 75 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY------TDLEELLAD---PDIDAVYIAT 75 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc------CCHHHHhcC---CCCCEEEEcC
Confidence 67889997544 45566666655 44555567888774 466778875322 234333332 2599999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
......+.+.++|.. |+=|.+..+
T Consensus 76 p~~~H~e~~~~AL~a--GkhVl~EKP 99 (342)
T COG0673 76 PNALHAELALAALEA--GKHVLCEKP 99 (342)
T ss_pred CChhhHHHHHHHHhc--CCEEEEcCC
Confidence 986668888888888 566777554
No 489
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=92.99 E-value=2.3 Score=32.75 Aligned_cols=88 Identities=22% Similarity=0.319 Sum_probs=59.2
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-HHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGLGTVGLAVAEGAKAA--GASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~--g~~~v~-~v~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|.|+|+|..|..-..-.+.. +. +++ ++++++++.+. .+++|.. .+ .++.+.+.+. .+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~~~---~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLADE---DVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHHHT---TESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHHhh---cCCEEEEec
Confidence 578999999998877666655 45 454 45666666554 5678876 33 2344444332 699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
......+.+.+++.. |.-|.+..
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred CCcchHHHHHHHHHc--CCEEEEEc
Confidence 987667777777777 45566644
No 490
>PRK07578 short chain dehydrogenase; Provisional
Probab=92.98 E-value=2.4 Score=36.02 Aligned_cols=86 Identities=22% Similarity=0.300 Sum_probs=51.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
++||+|+ |++|.+.+..+... + +|+.+++++.. ...|..+ .....+.+.+. +++|+++++.|..
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~-~~~~~~~~~~~--~~id~lv~~ag~~ 66 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD-PASIRALFEKV--GKVDAVVSAAGKV 66 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC-hHHHHHHHHhc--CCCCEEEECCCCC
Confidence 6899988 89999877766655 6 88888776431 1223332 12222323222 3688888877641
Q ss_pred -------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 268 -------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 268 -------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.+.+.+.+.++ |+++.+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~iss~ 113 (199)
T PRK07578 67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-GSFTLTSGI 113 (199)
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEccc
Confidence 1234445556675 888888753
No 491
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=92.97 E-value=1.1 Score=40.96 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=48.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|... . .++.+.+ ...|+||.|+....
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~------~~~~e~~-----~~~d~vi~~vp~~~ 70 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAET-A------STAKAVA-----EQCDVIITMLPNSP 70 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c------CCHHHHH-----hcCCEEEEeCCCHH
Confidence 68899999999887777777888 8889999888877777666521 1 1122222 14788888877544
Q ss_pred HHH
Q 017431 269 VMR 271 (371)
Q Consensus 269 ~~~ 271 (371)
..+
T Consensus 71 ~~~ 73 (296)
T PRK11559 71 HVK 73 (296)
T ss_pred HHH
Confidence 333
No 492
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=92.93 E-value=0.46 Score=41.93 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=45.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~----~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
++|||+|+ |++|...++.+...|+ +|+.+ .+++++.+. +++.+... . .|..+ ..+..+.+.+... ++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN-EADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence 57999988 8999998888888899 66554 445444332 22233322 1 22222 1233333333321 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999998873
No 493
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.91 E-value=1.1 Score=40.93 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=32.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~ 226 (371)
.+|.|+|+|.+|...++.+...|. .|+..+.++++.+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 478999999999887777777799 99999999987665
No 494
>PRK09134 short chain dehydrogenase; Provisional
Probab=92.90 E-value=0.57 Score=41.71 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHh---cCCcE-E--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
.++++||+|+ |.+|...+..+...|+ +|+.+.+ +.++.+ ...+ .+... . .|..+ .....+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 9999999988888999 6666544 333332 2222 23321 1 23332 122222333322 1
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 379999999873
No 495
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=92.87 E-value=0.63 Score=41.02 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HH---HhcCCcE-Ee--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RA---KNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~---~~~g~~~-vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...+..+...|+ .|+++.+ ++++.+ .. ++.+... .+ |..+ .....+.+.+...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999988888899 6665533 333322 22 2333322 12 2222 1223333333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+.+|++++++|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 268999998875
No 496
>PRK06436 glycerate dehydrogenase; Provisional
Probab=92.85 E-value=0.69 Score=42.51 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
-.|++|.|+|.|.+|...+++++.+|+ +|++.+++
T Consensus 120 L~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~ 154 (303)
T PRK06436 120 LYNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRS 154 (303)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 468999999999999999999999999 89999875
No 497
>PLN02256 arogenate dehydrogenase
Probab=92.84 E-value=1.6 Score=40.08 Aligned_cols=91 Identities=19% Similarity=0.175 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-..+.+|.|+|.|.+|.+.+..++..|. .|+++++++. .+.+.++|+.. .. +..+.+ ....|+|+-|
T Consensus 33 ~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~----~~~e~~----~~~aDvVila 99 (304)
T PLN02256 33 KSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FR----DPDDFC----EEHPDVVLLC 99 (304)
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eC----CHHHHh----hCCCCEEEEe
Confidence 3355789999999999998888888887 8888888764 35566677631 11 121111 1247888888
Q ss_pred cCCHHHHHHHHHH-----hccCCceEEEEcc
Q 017431 264 IGNVSVMRAALEC-----CHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~~~~~~~~~-----l~~~~G~iv~~g~ 289 (371)
+.... +...++. +.++ ..++.+++
T Consensus 100 vp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 100 TSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred cCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 87633 3343333 3454 56666665
No 498
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.84 E-value=0.43 Score=39.45 Aligned_cols=46 Identities=24% Similarity=0.268 Sum_probs=37.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
.|..||++|+ -++|...++-+...|+ +|+++.+.++.+..+-+.-.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p 52 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETP 52 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCC
Confidence 4678999999 5799999999999999 99999999987765544433
No 499
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=92.84 E-value=0.36 Score=38.12 Aligned_cols=78 Identities=22% Similarity=0.392 Sum_probs=49.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHh-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
-+|-|+|+|.+|......++..|. .|..+. ++.++.+.+.+ ++...+.+.. +.. ..+|++|-++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~-----------~~~-~~aDlv~iavp 77 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLE-----------EIL-RDADLVFIAVP 77 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TT-----------GGG-CC-SEEEE-S-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCcccccccccccccccccccc-----------ccc-ccCCEEEEEec
Confidence 478899999999999999999999 777774 44445555544 4433222221 111 26999999999
Q ss_pred CHHHHHHHHHHhcc
Q 017431 266 NVSVMRAALECCHK 279 (371)
Q Consensus 266 ~~~~~~~~~~~l~~ 279 (371)
+ +.+...++.|..
T Consensus 78 D-daI~~va~~La~ 90 (127)
T PF10727_consen 78 D-DAIAEVAEQLAQ 90 (127)
T ss_dssp C-CHHHHHHHHHHC
T ss_pred h-HHHHHHHHHHHH
Confidence 9 458888888875
No 500
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=92.83 E-value=0.37 Score=45.04 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=29.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
++|||+|+ |.+|...++.+...|+ +|+++++..+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCc
Confidence 47999988 9999999999999999 8888877653
Done!