Query 017434
Match_columns 371
No_of_seqs 280 out of 2056
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 14:22:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017434.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017434hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 3.3E-81 1.1E-85 607.5 34.7 347 7-360 2-349 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 6.7E-74 2.3E-78 567.5 36.9 358 5-362 25-386 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 4.7E-73 1.6E-77 557.7 35.4 352 4-361 10-362 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 4.2E-72 1.4E-76 552.2 39.9 366 6-371 3-370 (370)
5 1p4c_A L(+)-mandelate dehydrog 100.0 7.3E-69 2.5E-73 530.5 38.0 356 5-363 3-358 (380)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 7.2E-69 2.5E-73 547.5 38.7 352 5-362 120-482 (511)
7 3sr7_A Isopentenyl-diphosphate 100.0 2.1E-43 7.2E-48 345.1 27.1 274 44-362 54-357 (365)
8 1vcf_A Isopentenyl-diphosphate 100.0 6.9E-44 2.4E-48 346.5 20.3 280 26-357 8-329 (332)
9 1p0k_A Isopentenyl-diphosphate 100.0 8.9E-41 3.1E-45 326.7 26.5 275 42-361 21-329 (349)
10 2qr6_A IMP dehydrogenase/GMP r 100.0 1.1E-42 3.8E-47 345.3 8.3 314 18-360 13-392 (393)
11 3vkj_A Isopentenyl-diphosphate 100.0 7.2E-40 2.5E-44 321.1 25.2 273 44-361 27-344 (368)
12 1ypf_A GMP reductase; GUAC, pu 100.0 1.6E-36 5.4E-41 295.1 22.7 265 38-361 8-325 (336)
13 2c6q_A GMP reductase 2; TIM ba 100.0 2.6E-35 8.9E-40 287.6 20.0 262 38-358 14-342 (351)
14 3r2g_A Inosine 5'-monophosphat 100.0 1.7E-34 6E-39 281.0 21.5 254 44-356 8-317 (361)
15 1eep_A Inosine 5'-monophosphat 100.0 2.1E-31 7.2E-36 265.2 22.2 305 43-359 9-384 (404)
16 3khj_A Inosine-5-monophosphate 99.9 6.4E-25 2.2E-29 214.8 24.9 252 44-356 13-331 (361)
17 2e6f_A Dihydroorotate dehydrog 99.9 6.4E-25 2.2E-29 211.2 21.4 242 62-357 2-310 (314)
18 1jub_A Dihydroorotate dehydrog 99.9 3E-24 1E-28 206.2 23.1 241 64-357 2-308 (311)
19 4fo4_A Inosine 5'-monophosphat 99.9 2.8E-24 9.6E-29 210.1 23.0 256 44-356 14-335 (366)
20 3ffs_A Inosine-5-monophosphate 99.9 7.3E-24 2.5E-28 209.0 24.2 256 45-356 11-370 (400)
21 1gte_A Dihydropyrimidine dehyd 99.9 3.4E-24 1.2E-28 235.5 24.1 251 56-355 525-851 (1025)
22 1vhn_A Putative flavin oxidore 99.9 4.6E-25 1.6E-29 212.8 13.2 244 72-360 2-274 (318)
23 4ef8_A Dihydroorotate dehydrog 99.9 2.5E-23 8.6E-28 202.6 23.0 251 53-357 26-343 (354)
24 1ea0_A Glutamate synthase [NAD 99.9 2.7E-23 9.1E-28 228.5 22.8 310 9-359 794-1168(1479)
25 4af0_A Inosine-5'-monophosphat 99.9 4.9E-22 1.7E-26 199.3 24.8 142 215-356 308-523 (556)
26 1ep3_A Dihydroorotate dehydrog 99.9 1.2E-22 4.1E-27 194.6 19.3 243 59-357 2-306 (311)
27 3oix_A Putative dihydroorotate 99.9 6.5E-22 2.2E-26 192.1 23.6 242 62-356 36-340 (345)
28 3i65_A Dihydroorotate dehydrog 99.9 7.3E-22 2.5E-26 194.9 22.9 122 228-357 268-411 (415)
29 3zwt_A Dihydroorotate dehydrog 99.9 1.8E-21 6.3E-26 190.6 25.4 251 51-357 38-364 (367)
30 1ofd_A Ferredoxin-dependent gl 99.9 7.7E-22 2.6E-26 217.4 24.8 290 42-360 838-1204(1520)
31 1f76_A Dihydroorotate dehydrog 99.9 4.4E-21 1.5E-25 186.2 21.9 237 61-317 42-323 (336)
32 3b0p_A TRNA-dihydrouridine syn 99.9 1.3E-20 4.5E-25 183.9 25.0 245 73-361 2-283 (350)
33 1tv5_A Dhodehase, dihydroorota 99.9 8.9E-21 3E-25 189.4 23.9 123 227-357 295-439 (443)
34 1me8_A Inosine-5'-monophosphat 99.9 8.3E-21 2.8E-25 193.7 22.7 141 215-355 269-471 (503)
35 3usb_A Inosine-5'-monophosphat 99.9 2.9E-20 9.9E-25 189.8 26.2 141 216-356 284-481 (511)
36 4avf_A Inosine-5'-monophosphat 99.9 4.7E-20 1.6E-24 187.4 25.5 142 215-356 256-459 (490)
37 4fxs_A Inosine-5'-monophosphat 99.9 7E-20 2.4E-24 186.3 23.7 141 216-356 259-458 (496)
38 1vrd_A Inosine-5'-monophosphat 99.8 3.1E-19 1.1E-23 181.7 24.7 143 215-357 264-463 (494)
39 3tjx_A Dihydroorotate dehydrog 99.8 2.1E-19 7.1E-24 175.6 22.4 246 58-357 31-343 (354)
40 1zfj_A Inosine monophosphate d 99.8 1.1E-18 3.8E-23 177.5 23.5 144 215-358 260-463 (491)
41 2cu0_A Inosine-5'-monophosphat 99.8 2.1E-18 7.3E-23 175.2 19.8 138 217-357 257-454 (486)
42 1jcn_A Inosine monophosphate d 99.8 1.9E-18 6.4E-23 176.8 17.9 140 215-356 282-482 (514)
43 2gjl_A Hypothetical protein PA 99.7 2.3E-16 7.9E-21 152.4 23.5 198 66-329 9-218 (328)
44 2z6i_A Trans-2-enoyl-ACP reduc 99.7 1.7E-16 5.7E-21 153.7 21.8 185 67-321 7-200 (332)
45 3bo9_A Putative nitroalkan dio 99.7 3.7E-16 1.3E-20 150.9 23.4 190 71-328 23-221 (326)
46 3bw2_A 2-nitropropane dioxygen 99.7 2.8E-15 9.7E-20 147.1 23.9 206 74-320 10-245 (369)
47 1z41_A YQJM, probable NADH-dep 99.7 3.5E-15 1.2E-19 144.8 20.8 227 65-317 8-312 (338)
48 2gou_A Oxidoreductase, FMN-bin 99.6 4.5E-14 1.6E-18 138.3 17.9 223 65-317 8-327 (365)
49 1vyr_A Pentaerythritol tetrani 99.6 2.5E-13 8.5E-18 133.0 21.4 224 65-317 8-328 (364)
50 2r14_A Morphinone reductase; H 99.6 8.6E-14 2.9E-18 136.8 18.1 224 64-317 13-333 (377)
51 3gr7_A NADPH dehydrogenase; fl 99.6 8.8E-13 3E-17 127.9 24.0 228 64-317 7-312 (340)
52 2hsa_B 12-oxophytodienoate red 99.5 7.6E-13 2.6E-17 131.1 20.1 152 139-317 171-353 (402)
53 1icp_A OPR1, 12-oxophytodienoa 99.5 5E-13 1.7E-17 131.3 16.5 226 64-317 18-335 (376)
54 3hgj_A Chromate reductase; TIM 99.5 5.6E-12 1.9E-16 122.7 23.8 150 142-317 155-323 (349)
55 2uva_G Fatty acid synthase bet 99.5 7.2E-13 2.5E-17 152.5 17.8 213 51-327 558-810 (2060)
56 3kru_A NADH:flavin oxidoreduct 99.4 1E-11 3.5E-16 120.5 21.0 226 64-317 6-312 (343)
57 3l5a_A NADH/flavin oxidoreduct 99.4 4.4E-12 1.5E-16 126.1 18.2 243 50-317 13-351 (419)
58 1ps9_A 2,4-dienoyl-COA reducta 99.4 7.2E-12 2.4E-16 131.8 19.2 228 64-317 7-315 (671)
59 3l5l_A Xenobiotic reductase A; 99.4 4.6E-11 1.6E-15 116.8 21.4 102 214-317 209-330 (363)
60 1o94_A Tmadh, trimethylamine d 99.4 1.3E-11 4.6E-16 131.0 18.4 226 65-317 12-326 (729)
61 3k30_A Histamine dehydrogenase 99.3 7.6E-11 2.6E-15 124.4 19.8 227 64-317 16-329 (690)
62 3igs_A N-acetylmannosamine-6-p 99.3 1.9E-10 6.6E-15 105.6 19.9 170 93-317 38-215 (232)
63 3gka_A N-ethylmaleimide reduct 99.3 1E-10 3.5E-15 114.0 19.0 141 142-317 164-321 (361)
64 3q58_A N-acetylmannosamine-6-p 99.3 4.5E-11 1.5E-15 109.6 15.4 173 90-317 35-215 (229)
65 4ab4_A Xenobiotic reductase B; 99.3 1.3E-10 4.4E-15 113.4 19.3 141 142-317 156-313 (362)
66 1y0e_A Putative N-acetylmannos 99.3 2.5E-10 8.4E-15 103.7 19.0 97 217-316 107-208 (223)
67 1xm3_A Thiazole biosynthesis p 99.2 2.4E-09 8.3E-14 100.1 22.6 199 65-317 3-212 (264)
68 1mzh_A Deoxyribose-phosphate a 99.2 4.4E-10 1.5E-14 102.7 15.4 94 216-314 104-206 (225)
69 1yxy_A Putative N-acetylmannos 99.0 7.6E-09 2.6E-13 94.6 17.0 170 94-316 39-219 (234)
70 2uv8_G Fatty acid synthase sub 99.0 3.3E-09 1.1E-13 121.9 16.2 199 66-325 584-815 (2051)
71 2zbt_A Pyridoxal biosynthesis 98.9 2.3E-09 7.9E-14 101.7 10.1 121 228-357 125-277 (297)
72 3aty_A Tcoye, prostaglandin F2 98.9 7E-09 2.4E-13 101.8 12.9 146 143-317 178-341 (379)
73 1wa3_A 2-keto-3-deoxy-6-phosph 98.9 3.3E-08 1.1E-12 88.4 16.0 167 128-317 12-183 (205)
74 2nv1_A Pyridoxal biosynthesis 98.9 3.2E-09 1.1E-13 101.3 9.8 120 227-355 124-275 (305)
75 1rd5_A Tryptophan synthase alp 98.9 7.8E-08 2.7E-12 89.5 18.3 70 269-340 189-259 (262)
76 3o07_A Pyridoxine biosynthesis 98.9 3.6E-08 1.2E-12 91.3 14.7 87 228-317 115-234 (291)
77 1qop_A Tryptophan synthase alp 98.9 6.2E-08 2.1E-12 90.6 16.4 154 137-319 29-241 (268)
78 3nav_A Tryptophan synthase alp 98.9 7E-08 2.4E-12 90.4 16.7 157 135-320 30-245 (271)
79 3tsm_A IGPS, indole-3-glycerol 98.9 5.1E-08 1.7E-12 91.3 15.5 162 142-318 82-255 (272)
80 3ngj_A Deoxyribose-phosphate a 98.8 5.2E-08 1.8E-12 89.2 14.9 97 213-314 126-231 (239)
81 1geq_A Tryptophan synthase alp 98.8 3.1E-08 1.1E-12 91.2 13.5 120 216-338 68-245 (248)
82 3vnd_A TSA, tryptophan synthas 98.8 1.1E-07 3.8E-12 88.8 16.9 153 137-320 30-243 (267)
83 4e38_A Keto-hydroxyglutarate-a 98.8 1.9E-08 6.5E-13 92.0 11.1 169 130-316 37-206 (232)
84 3oa3_A Aldolase; structural ge 98.8 1.3E-07 4.5E-12 88.6 16.8 171 95-313 78-264 (288)
85 1wv2_A Thiazole moeity, thiazo 98.8 9.8E-07 3.3E-11 81.1 21.9 86 228-317 135-221 (265)
86 3zen_D Fatty acid synthase; tr 98.8 2.2E-08 7.4E-13 119.0 13.7 212 50-321 402-655 (3089)
87 2qjg_A Putative aldolase MJ040 98.8 4.1E-08 1.4E-12 91.8 13.1 184 71-317 30-242 (273)
88 4a3u_A NCR, NADH\:flavin oxido 98.8 1.4E-07 4.9E-12 91.8 17.1 100 215-317 204-320 (358)
89 2v82_A 2-dehydro-3-deoxy-6-pho 98.8 5.5E-08 1.9E-12 87.4 12.8 192 135-344 15-206 (212)
90 3qja_A IGPS, indole-3-glycerol 98.8 8.6E-08 2.9E-12 89.9 14.3 89 226-318 160-248 (272)
91 3r12_A Deoxyribose-phosphate a 98.7 2.8E-07 9.4E-12 85.3 15.5 94 215-313 144-246 (260)
92 2yzr_A Pyridoxal biosynthesis 98.7 9.3E-08 3.2E-12 90.9 12.2 45 271-317 230-276 (330)
93 3ndo_A Deoxyribose-phosphate a 98.7 3.3E-07 1.1E-11 83.5 15.4 95 215-313 113-220 (231)
94 4adt_A Pyridoxine biosynthetic 98.7 2.6E-08 8.9E-13 94.4 7.1 115 227-350 124-270 (297)
95 2ekc_A AQ_1548, tryptophan syn 98.7 4.3E-07 1.5E-11 84.7 15.3 169 136-334 28-256 (262)
96 3tdn_A FLR symmetric alpha-bet 98.7 5.9E-08 2E-12 89.4 9.1 47 269-317 188-234 (247)
97 1ub3_A Aldolase protein; schif 98.6 4.9E-07 1.7E-11 82.1 14.5 169 95-313 23-206 (220)
98 3lab_A Putative KDPG (2-keto-3 98.6 5.9E-08 2E-12 87.6 8.4 169 130-316 16-191 (217)
99 2w6r_A Imidazole glycerol phos 98.6 5.6E-07 1.9E-11 83.5 15.4 77 239-318 159-235 (266)
100 2yw3_A 4-hydroxy-2-oxoglutarat 98.6 1.4E-07 4.9E-12 84.9 10.8 95 213-317 90-184 (207)
101 1vc4_A Indole-3-glycerol phosp 98.6 1.7E-07 5.8E-12 87.0 11.5 79 236-318 161-242 (254)
102 2y88_A Phosphoribosyl isomeras 98.6 5.5E-07 1.9E-11 82.4 14.5 76 239-317 152-230 (244)
103 3tjl_A NADPH dehydrogenase; OL 98.6 4.4E-08 1.5E-12 96.6 7.2 103 213-317 218-351 (407)
104 1vhc_A Putative KHG/KDPG aldol 98.6 4E-07 1.4E-11 82.9 11.5 164 135-317 25-190 (224)
105 3f4w_A Putative hexulose 6 pho 98.5 1.5E-06 5E-11 77.8 14.8 169 91-317 13-192 (211)
106 1vzw_A Phosphoribosyl isomeras 98.5 1.1E-06 3.9E-11 80.4 14.2 74 239-317 149-227 (244)
107 1yad_A Regulatory protein TENI 98.5 1.3E-06 4.6E-11 78.9 13.9 95 217-317 101-197 (221)
108 2p10_A MLL9387 protein; putati 98.5 6.8E-06 2.3E-10 76.4 18.4 212 74-339 27-279 (286)
109 3ovp_A Ribulose-phosphate 3-ep 98.5 5.2E-06 1.8E-10 75.7 17.3 159 135-345 13-224 (228)
110 1h5y_A HISF; histidine biosynt 98.5 1.2E-06 3.9E-11 80.1 11.8 76 239-317 157-232 (253)
111 1ka9_F Imidazole glycerol phos 98.4 8.5E-07 2.9E-11 81.6 10.8 77 239-318 155-231 (252)
112 4a29_A Engineered retro-aldol 98.4 6.5E-06 2.2E-10 75.7 15.7 177 119-318 51-239 (258)
113 1qo2_A Molecule: N-((5-phospho 98.4 9.1E-07 3.1E-11 81.1 9.5 78 238-318 145-229 (241)
114 1vcv_A Probable deoxyribose-ph 98.4 2.5E-05 8.4E-10 71.0 18.6 99 214-313 98-221 (226)
115 4gbu_A NADPH dehydrogenase 1; 98.4 4E-06 1.4E-10 82.8 14.4 101 215-317 224-353 (400)
116 1thf_D HISF protein; thermophI 98.4 1E-06 3.6E-11 81.0 9.6 76 239-317 154-229 (253)
117 1wbh_A KHG/KDPG aldolase; lyas 98.4 3.3E-06 1.1E-10 76.3 12.1 164 135-317 24-189 (214)
118 2htm_A Thiazole biosynthesis p 98.4 1.3E-06 4.6E-11 80.4 9.5 79 235-317 131-212 (268)
119 2tps_A Protein (thiamin phosph 98.4 2.5E-06 8.7E-11 77.0 11.3 95 220-317 107-205 (227)
120 1pii_A N-(5'phosphoribosyl)ant 98.3 9.5E-06 3.2E-10 81.0 16.1 120 220-354 150-269 (452)
121 3inp_A D-ribulose-phosphate 3- 98.3 2.1E-05 7.1E-10 72.5 16.4 153 135-338 36-243 (246)
122 1jvn_A Glutamine, bifunctional 98.3 1.9E-06 6.5E-11 88.6 10.4 77 239-318 455-532 (555)
123 3o63_A Probable thiamine-phosp 98.3 3.7E-06 1.3E-10 77.5 11.0 81 236-317 142-224 (243)
124 1i4n_A Indole-3-glycerol phosp 98.3 2.1E-05 7.3E-10 72.6 15.9 93 220-318 143-236 (251)
125 3jr2_A Hexulose-6-phosphate sy 98.3 6.5E-06 2.2E-10 74.3 12.1 187 90-339 18-214 (218)
126 1ujp_A Tryptophan synthase alp 98.3 8.8E-06 3E-10 76.1 13.3 100 216-319 79-236 (271)
127 2fli_A Ribulose-phosphate 3-ep 98.3 2.2E-05 7.4E-10 70.5 15.4 92 240-338 122-218 (220)
128 1w8s_A FBP aldolase, fructose- 98.3 2.4E-05 8.3E-10 72.8 15.8 85 224-318 134-237 (263)
129 2a4a_A Deoxyribose-phosphate a 98.2 8.8E-06 3E-10 76.1 12.3 88 215-307 142-249 (281)
130 1xi3_A Thiamine phosphate pyro 98.2 1.6E-05 5.5E-10 70.9 13.2 79 236-317 115-195 (215)
131 1mxs_A KDPG aldolase; 2-keto-3 98.2 5.3E-06 1.8E-10 75.5 10.1 92 214-317 106-199 (225)
132 2agk_A 1-(5-phosphoribosyl)-5- 98.2 3.2E-06 1.1E-10 78.7 8.4 74 240-315 162-239 (260)
133 3tdn_A FLR symmetric alpha-bet 98.2 6E-06 2E-10 75.9 10.2 76 239-317 38-113 (247)
134 1n7k_A Deoxyribose-phosphate a 98.2 1.1E-05 3.8E-10 73.7 11.5 90 216-313 118-222 (234)
135 1p1x_A Deoxyribose-phosphate a 98.2 8.9E-06 3.1E-10 75.4 11.0 91 213-307 116-222 (260)
136 1tqj_A Ribulose-phosphate 3-ep 98.2 1.8E-05 6.3E-10 72.1 12.6 137 135-317 13-206 (230)
137 1rpx_A Protein (ribulose-phosp 98.2 4.7E-05 1.6E-09 69.0 15.3 168 94-317 26-212 (230)
138 1wv2_A Thiazole moeity, thiazo 98.1 9.5E-06 3.2E-10 74.6 9.6 108 126-257 102-217 (265)
139 4gj1_A 1-(5-phosphoribosyl)-5- 98.1 1.6E-05 5.6E-10 73.1 11.3 102 215-318 62-230 (243)
140 1h1y_A D-ribulose-5-phosphate 98.1 0.00022 7.5E-09 64.6 17.9 113 218-339 104-222 (228)
141 3tha_A Tryptophan synthase alp 98.0 7.2E-05 2.5E-09 69.0 14.0 146 126-325 89-240 (252)
142 3kts_A Glycerol uptake operon 98.0 0.00019 6.7E-09 63.3 14.5 146 127-318 31-185 (192)
143 3glc_A Aldolase LSRF; TIM barr 98.0 0.00017 5.8E-09 68.1 15.1 82 224-318 167-263 (295)
144 3ctl_A D-allulose-6-phosphate 97.9 0.00022 7.5E-09 65.0 15.3 118 216-339 45-218 (231)
145 1thf_D HISF protein; thermophI 97.9 5E-05 1.7E-09 69.6 10.5 75 240-317 34-108 (253)
146 1ka9_F Imidazole glycerol phos 97.9 5.2E-05 1.8E-09 69.5 10.5 76 239-317 34-109 (252)
147 1h5y_A HISF; histidine biosynt 97.8 0.00011 3.8E-09 66.7 11.5 77 238-317 35-111 (253)
148 1qap_A Quinolinic acid phospho 97.8 0.00014 5E-09 68.6 11.8 86 218-315 197-283 (296)
149 2b7n_A Probable nicotinate-nuc 97.8 6.3E-05 2.2E-09 70.3 9.1 88 217-316 169-261 (273)
150 3ajx_A 3-hexulose-6-phosphate 97.8 0.00022 7.6E-09 63.2 12.0 75 238-317 115-191 (207)
151 3s1x_A Probable transaldolase; 97.7 0.0049 1.7E-07 55.6 20.4 184 92-334 8-212 (223)
152 3r8r_A Transaldolase; pentose 97.7 0.0052 1.8E-07 55.0 20.3 182 92-332 8-208 (212)
153 4eiv_A Deoxyribose-phosphate a 97.7 0.00046 1.6E-08 64.5 13.8 94 215-316 136-262 (297)
154 2y88_A Phosphoribosyl isomeras 97.7 0.00015 5E-09 66.1 10.4 75 239-317 34-108 (244)
155 3vk5_A MOEO5; TIM barrel, tran 97.7 0.00012 4.2E-09 68.1 9.6 70 242-317 192-261 (286)
156 2czd_A Orotidine 5'-phosphate 97.7 0.001 3.6E-08 59.2 15.4 81 242-339 125-206 (208)
157 1vzw_A Phosphoribosyl isomeras 97.7 0.00017 5.8E-09 65.8 10.0 75 239-317 35-109 (244)
158 1qo2_A Molecule: N-((5-phospho 97.7 3.8E-05 1.3E-09 70.1 5.4 75 239-317 33-107 (241)
159 3ceu_A Thiamine phosphate pyro 97.7 8.5E-05 2.9E-09 66.5 7.4 81 235-317 94-177 (210)
160 1x1o_A Nicotinate-nucleotide p 97.7 0.00041 1.4E-08 65.2 12.3 87 218-316 184-272 (286)
161 2w6r_A Imidazole glycerol phos 97.6 9.9E-05 3.4E-09 68.2 7.6 76 238-316 32-107 (266)
162 2qr6_A IMP dehydrogenase/GMP r 97.6 0.00016 5.4E-09 71.0 9.5 98 212-313 140-240 (393)
163 2jbm_A Nicotinate-nucleotide p 97.6 0.00012 4.2E-09 69.3 8.2 86 218-315 185-275 (299)
164 1xg4_A Probable methylisocitra 97.6 0.0052 1.8E-07 57.8 18.6 187 77-318 18-241 (295)
165 3vzx_A Heptaprenylglyceryl pho 97.5 0.00057 1.9E-08 62.0 11.2 79 244-335 148-226 (228)
166 1vpx_A Protein (transaldolase 97.5 0.0087 3E-07 54.2 18.5 118 216-336 99-223 (230)
167 1ypf_A GMP reductase; GUAC, pu 97.5 0.00031 1.1E-08 67.5 9.4 130 104-312 46-177 (336)
168 1q6o_A Humps, 3-keto-L-gulonat 97.5 0.0036 1.2E-07 56.0 15.9 111 220-339 99-212 (216)
169 1to3_A Putative aldolase YIHT; 97.5 0.00076 2.6E-08 63.9 11.5 95 218-318 145-260 (304)
170 3c2e_A Nicotinate-nucleotide p 97.5 0.00013 4.3E-09 69.0 5.9 86 218-315 187-280 (294)
171 1y0e_A Putative N-acetylmannos 97.4 0.0066 2.2E-07 54.2 17.0 93 218-315 46-149 (223)
172 3tqv_A Nicotinate-nucleotide p 97.4 0.00072 2.5E-08 63.3 10.4 87 218-316 187-274 (287)
173 3cwo_X Beta/alpha-barrel prote 97.4 0.00055 1.9E-08 60.9 9.3 75 240-317 134-208 (237)
174 3paj_A Nicotinate-nucleotide p 97.3 0.0013 4.4E-08 62.5 11.3 86 218-315 220-306 (320)
175 3qja_A IGPS, indole-3-glycerol 97.3 0.0024 8.2E-08 59.5 13.1 88 217-313 102-190 (272)
176 3q58_A N-acetylmannosamine-6-p 97.3 0.0053 1.8E-07 55.7 14.6 86 217-311 58-155 (229)
177 1jcn_A Inosine monophosphate d 97.3 0.0019 6.5E-08 65.5 12.6 68 239-312 257-324 (514)
178 3igs_A N-acetylmannosamine-6-p 97.3 0.0059 2E-07 55.4 14.6 86 217-311 58-155 (232)
179 3exr_A RMPD (hexulose-6-phosph 97.2 0.0007 2.4E-08 61.2 8.0 97 237-340 122-218 (221)
180 3nvt_A 3-deoxy-D-arabino-heptu 97.2 0.011 3.7E-07 57.7 17.0 208 58-315 123-349 (385)
181 2h6r_A Triosephosphate isomera 97.2 0.0026 8.8E-08 57.3 11.6 97 220-318 104-205 (219)
182 3iv3_A Tagatose 1,6-diphosphat 97.2 0.0023 7.8E-08 61.2 11.6 130 218-357 150-318 (332)
183 2pgw_A Muconate cycloisomerase 97.2 0.012 4.1E-07 57.3 17.0 121 136-315 146-274 (384)
184 1tqx_A D-ribulose-5-phosphate 97.2 0.0028 9.4E-08 57.5 11.4 113 218-339 102-222 (227)
185 4gj1_A 1-(5-phosphoribosyl)-5- 97.2 0.0012 4.1E-08 60.5 9.0 74 240-316 35-108 (243)
186 3l0g_A Nicotinate-nucleotide p 97.2 0.0017 5.7E-08 61.0 10.1 86 218-315 196-282 (300)
187 2f6u_A GGGPS, (S)-3-O-geranylg 97.2 0.00098 3.3E-08 60.8 8.2 73 238-318 147-224 (234)
188 1o4u_A Type II quinolic acid p 97.2 0.00064 2.2E-08 63.8 7.1 87 218-316 181-272 (285)
189 1qpo_A Quinolinate acid phosph 97.1 0.0017 5.8E-08 60.9 9.3 87 218-316 183-273 (284)
190 3gnn_A Nicotinate-nucleotide p 97.1 0.0015 5.2E-08 61.4 9.0 86 218-315 198-284 (298)
191 3nl6_A Thiamine biosynthetic b 97.1 0.0041 1.4E-07 63.5 12.6 81 236-317 115-214 (540)
192 1viz_A PCRB protein homolog; s 97.0 0.0013 4.5E-08 60.1 7.8 72 238-317 140-215 (240)
193 3khj_A Inosine-5-monophosphate 97.0 0.0042 1.4E-07 60.2 11.6 89 217-312 84-173 (361)
194 2ovl_A Putative racemase; stru 97.0 0.012 4.1E-07 57.0 14.8 121 137-315 146-275 (371)
195 3iwp_A Copper homeostasis prot 97.0 0.0082 2.8E-07 56.0 12.4 167 93-312 48-238 (287)
196 3cu2_A Ribulose-5-phosphate 3- 96.9 0.0042 1.4E-07 56.7 10.1 79 238-317 137-222 (237)
197 3ve9_A Orotidine-5'-phosphate 96.9 0.0018 6.3E-08 58.2 7.5 87 240-344 119-206 (215)
198 1l6w_A Fructose-6-phosphate al 96.9 0.048 1.6E-06 49.0 16.7 115 216-333 89-210 (220)
199 1mdl_A Mandelate racemase; iso 96.9 0.006 2.1E-07 58.8 11.6 121 136-314 143-272 (359)
200 4e38_A Keto-hydroxyglutarate-a 96.8 0.0035 1.2E-07 57.0 8.7 81 216-311 72-153 (232)
201 3ih1_A Methylisocitrate lyase; 96.8 0.045 1.5E-06 51.7 16.3 89 218-318 148-249 (305)
202 2wqp_A Polysialic acid capsule 96.8 0.049 1.7E-06 52.3 16.5 228 75-347 19-273 (349)
203 1w0m_A TIM, triosephosphate is 96.7 0.0082 2.8E-07 54.3 10.3 38 281-318 171-208 (226)
204 1hg3_A Triosephosphate isomera 96.7 0.012 4.1E-07 53.2 11.3 40 279-318 172-211 (225)
205 3lab_A Putative KDPG (2-keto-3 96.7 0.0049 1.7E-07 55.4 8.5 81 216-311 51-138 (217)
206 4dbe_A Orotidine 5'-phosphate 96.7 0.0043 1.5E-07 56.0 8.1 88 239-344 125-213 (222)
207 1yxy_A Putative N-acetylmannos 96.6 0.033 1.1E-06 50.0 13.6 88 218-309 59-157 (234)
208 2hzg_A Mandelate racemase/muco 96.6 0.086 2.9E-06 51.5 17.6 125 135-315 143-280 (401)
209 1vli_A Spore coat polysacchari 96.6 0.2 6.7E-06 48.7 19.4 206 66-315 16-249 (385)
210 1xm3_A Thiazole biosynthesis p 96.6 0.008 2.7E-07 55.6 9.3 42 216-257 166-208 (264)
211 1wx0_A Transaldolase; structur 96.5 0.057 1.9E-06 48.7 14.4 104 216-322 96-204 (223)
212 1zco_A 2-dehydro-3-deoxyphosph 96.5 0.21 7E-06 46.1 18.5 190 76-315 24-230 (262)
213 3w01_A Heptaprenylglyceryl pho 96.5 0.0073 2.5E-07 54.9 8.4 61 249-317 159-219 (235)
214 2qgy_A Enolase from the enviro 96.5 0.029 9.8E-07 54.7 13.4 120 136-313 148-276 (391)
215 2nql_A AGR_PAT_674P, isomerase 96.5 0.014 4.7E-07 56.9 11.0 119 136-313 163-290 (388)
216 4fo4_A Inosine 5'-monophosphat 96.5 0.014 4.7E-07 56.7 10.8 89 218-312 86-177 (366)
217 1rvk_A Isomerase/lactonizing e 96.5 0.081 2.8E-06 51.2 16.4 128 136-315 148-285 (382)
218 2bdq_A Copper homeostasis prot 96.5 0.046 1.6E-06 49.1 13.4 130 133-313 70-208 (224)
219 1jvn_A Glutamine, bifunctional 96.4 0.0031 1E-07 64.7 5.9 76 240-317 284-372 (555)
220 1wbh_A KHG/KDPG aldolase; lyas 96.4 0.012 4.1E-07 52.7 9.1 80 217-311 55-135 (214)
221 2og9_A Mandelate racemase/muco 96.4 0.025 8.6E-07 55.2 12.1 119 137-313 162-289 (393)
222 1nu5_A Chloromuconate cycloiso 96.4 0.12 4.2E-06 49.7 16.8 121 136-314 141-271 (370)
223 2rdx_A Mandelate racemase/muco 96.4 0.044 1.5E-06 53.1 13.5 117 136-314 144-269 (379)
224 1vhc_A Putative KHG/KDPG aldol 96.4 0.014 4.9E-07 52.6 9.3 80 217-311 56-136 (224)
225 2agk_A 1-(5-phosphoribosyl)-5- 96.3 0.0062 2.1E-07 56.3 6.8 68 239-317 41-108 (260)
226 3ozy_A Putative mandelate race 96.2 0.039 1.3E-06 53.8 12.4 120 135-313 149-278 (389)
227 1i4n_A Indole-3-glycerol phosp 96.2 0.073 2.5E-06 48.8 13.3 90 216-314 89-180 (251)
228 1vkf_A Glycerol uptake operon 96.1 0.0043 1.5E-07 54.4 4.5 143 127-319 33-184 (188)
229 1mxs_A KDPG aldolase; 2-keto-3 96.1 0.012 4E-07 53.3 7.5 111 135-311 34-145 (225)
230 2p8b_A Mandelate racemase/muco 96.1 0.058 2E-06 52.0 12.6 121 136-315 140-270 (369)
231 2qde_A Mandelate racemase/muco 96.0 0.05 1.7E-06 53.1 12.1 119 136-313 144-271 (397)
232 1vc4_A Indole-3-glycerol phosp 96.0 0.035 1.2E-06 51.0 10.3 72 239-316 68-139 (254)
233 1pii_A N-(5'phosphoribosyl)ant 96.0 0.051 1.8E-06 54.0 12.1 90 217-315 97-187 (452)
234 3lye_A Oxaloacetate acetyl hyd 96.0 0.39 1.3E-05 45.2 17.6 67 242-318 184-253 (307)
235 2pp0_A L-talarate/galactarate 96.0 0.054 1.9E-06 52.9 12.1 119 137-313 175-302 (398)
236 3r2g_A Inosine 5'-monophosphat 95.9 0.023 7.8E-07 54.9 9.0 68 239-312 102-169 (361)
237 1vs1_A 3-deoxy-7-phosphoheptul 95.9 0.68 2.3E-05 42.9 18.6 207 60-315 21-245 (276)
238 3tsm_A IGPS, indole-3-glycerol 95.9 0.055 1.9E-06 50.2 11.1 71 240-316 83-153 (272)
239 1tkk_A Similar to chloromucona 95.9 0.21 7.3E-06 47.9 15.8 121 136-314 139-270 (366)
240 3eoo_A Methylisocitrate lyase; 95.9 0.42 1.5E-05 44.8 17.2 67 241-318 176-245 (298)
241 3nav_A Tryptophan synthase alp 95.9 0.025 8.4E-07 52.6 8.6 40 217-256 197-237 (271)
242 3i4k_A Muconate lactonizing en 95.9 0.14 4.8E-06 49.7 14.4 88 216-313 180-276 (383)
243 2oz8_A MLL7089 protein; struct 95.9 0.3 1E-05 47.4 16.8 118 137-312 145-273 (389)
244 3rcy_A Mandelate racemase/muco 95.8 0.065 2.2E-06 53.0 11.9 133 136-314 145-286 (433)
245 1s2w_A Phosphoenolpyruvate pho 95.8 0.27 9.2E-06 46.1 15.5 71 240-318 174-244 (295)
246 1zfj_A Inosine monophosphate d 95.8 0.022 7.5E-07 57.2 8.6 250 44-312 12-302 (491)
247 1jub_A Dihydroorotate dehydrog 95.8 0.024 8.3E-07 53.3 8.3 158 74-256 93-271 (311)
248 3eez_A Putative mandelate race 95.8 0.13 4.4E-06 49.9 13.5 119 135-315 143-270 (378)
249 3stp_A Galactonate dehydratase 95.7 0.081 2.8E-06 52.0 12.1 128 136-315 178-314 (412)
250 4dwd_A Mandelate racemase/muco 95.7 0.14 4.8E-06 49.9 13.8 126 136-313 138-272 (393)
251 2vc6_A MOSA, dihydrodipicolina 95.7 0.91 3.1E-05 42.2 18.8 180 76-316 7-209 (292)
252 3daq_A DHDPS, dihydrodipicolin 95.7 0.059 2E-06 50.4 10.6 92 242-336 29-125 (292)
253 2qdd_A Mandelate racemase/muco 95.7 0.25 8.4E-06 47.7 15.4 119 136-315 144-270 (378)
254 1twd_A Copper homeostasis prot 95.7 0.098 3.3E-06 47.9 11.4 126 133-312 67-198 (256)
255 2yw3_A 4-hydroxy-2-oxoglutarat 95.7 0.044 1.5E-06 48.7 9.0 110 135-311 21-130 (207)
256 3tak_A DHDPS, dihydrodipicolin 95.7 0.069 2.4E-06 49.9 10.8 90 243-335 29-123 (291)
257 3flu_A DHDPS, dihydrodipicolin 95.7 0.073 2.5E-06 49.9 11.0 90 243-335 35-129 (297)
258 1nsj_A PRAI, phosphoribosyl an 95.6 0.24 8.4E-06 43.8 13.6 87 217-315 88-183 (205)
259 3sjn_A Mandelate racemase/muco 95.6 0.043 1.5E-06 53.2 9.4 120 138-313 147-276 (374)
260 2wkj_A N-acetylneuraminate lya 95.6 0.081 2.8E-06 49.8 11.0 94 242-338 38-136 (303)
261 3cpr_A Dihydrodipicolinate syn 95.6 0.097 3.3E-06 49.3 11.5 91 242-335 43-138 (304)
262 2r8w_A AGR_C_1641P; APC7498, d 95.5 0.079 2.7E-06 50.6 10.9 91 242-335 61-156 (332)
263 3qze_A DHDPS, dihydrodipicolin 95.5 0.069 2.4E-06 50.6 10.5 91 242-335 50-145 (314)
264 1xky_A Dihydrodipicolinate syn 95.5 0.082 2.8E-06 49.7 10.9 90 242-334 39-133 (301)
265 3jva_A Dipeptide epimerase; en 95.5 0.25 8.6E-06 47.3 14.6 121 136-315 138-267 (354)
266 3l21_A DHDPS, dihydrodipicolin 95.5 0.067 2.3E-06 50.4 10.2 90 242-334 42-136 (304)
267 1zlp_A PSR132, petal death pro 95.5 0.43 1.5E-05 45.2 15.7 189 76-318 39-263 (318)
268 2yxg_A DHDPS, dihydrodipicolin 95.5 0.086 3E-06 49.2 10.8 91 242-335 27-122 (289)
269 3si9_A DHDPS, dihydrodipicolin 95.5 0.062 2.1E-06 50.9 10.0 91 242-335 49-144 (315)
270 1o66_A 3-methyl-2-oxobutanoate 95.5 0.73 2.5E-05 42.6 16.7 39 240-290 165-203 (275)
271 2ehh_A DHDPS, dihydrodipicolin 95.5 0.085 2.9E-06 49.4 10.7 90 242-334 27-121 (294)
272 3kts_A Glycerol uptake operon 95.5 0.1 3.5E-06 45.8 10.4 42 217-258 139-181 (192)
273 1f6k_A N-acetylneuraminate lya 95.4 0.085 2.9E-06 49.4 10.5 91 243-336 31-127 (293)
274 3fkr_A L-2-keto-3-deoxyarabona 95.4 0.095 3.2E-06 49.5 10.9 93 243-335 36-133 (309)
275 3na8_A Putative dihydrodipicol 95.4 0.064 2.2E-06 50.8 9.7 91 242-335 51-146 (315)
276 2ojp_A DHDPS, dihydrodipicolin 95.4 0.082 2.8E-06 49.5 10.2 89 242-333 28-121 (292)
277 3zwt_A Dihydroorotate dehydrog 95.4 0.051 1.7E-06 52.7 9.0 104 126-256 221-327 (367)
278 3b4u_A Dihydrodipicolinate syn 95.3 0.086 3E-06 49.4 10.3 93 242-337 30-128 (294)
279 1rpx_A Protein (ribulose-phosp 95.3 0.21 7.3E-06 44.5 12.6 127 133-313 17-148 (230)
280 2ps2_A Putative mandelate race 95.3 0.2 6.8E-06 48.2 13.2 117 136-314 145-271 (371)
281 2gdq_A YITF; mandelate racemas 95.3 0.071 2.4E-06 51.7 10.0 119 136-312 135-266 (382)
282 3m47_A Orotidine 5'-phosphate 95.3 0.025 8.4E-07 51.2 6.2 81 241-339 142-223 (228)
283 3b0p_A TRNA-dihydrouridine syn 95.3 0.13 4.6E-06 49.3 11.7 95 124-256 125-225 (350)
284 2rfg_A Dihydrodipicolinate syn 95.3 0.084 2.9E-06 49.5 10.0 92 242-336 27-123 (297)
285 3m5v_A DHDPS, dihydrodipicolin 95.3 0.099 3.4E-06 49.1 10.4 91 242-335 34-130 (301)
286 3rr1_A GALD, putative D-galact 95.3 0.076 2.6E-06 52.1 10.0 129 135-313 123-260 (405)
287 1vr6_A Phospho-2-dehydro-3-deo 95.3 0.52 1.8E-05 45.2 15.5 289 8-346 21-346 (350)
288 1tzz_A Hypothetical protein L1 95.2 0.083 2.8E-06 51.4 10.2 119 137-313 165-296 (392)
289 3g8r_A Probable spore coat pol 95.2 0.43 1.5E-05 45.7 14.8 226 74-347 4-261 (350)
290 3vnd_A TSA, tryptophan synthas 95.2 0.06 2.1E-06 49.8 8.6 42 216-257 194-236 (267)
291 3flu_A DHDPS, dihydrodipicolin 95.2 2 6.8E-05 40.0 19.6 182 75-316 12-215 (297)
292 4avf_A Inosine-5'-monophosphat 95.2 0.054 1.8E-06 54.5 8.8 249 45-312 11-298 (490)
293 3si9_A DHDPS, dihydrodipicolin 95.2 2 6.8E-05 40.4 19.2 182 75-316 27-231 (315)
294 2v9d_A YAGE; dihydrodipicolini 95.2 0.1 3.5E-06 50.0 10.4 90 242-334 58-152 (343)
295 2v82_A 2-dehydro-3-deoxy-6-pho 95.1 0.067 2.3E-06 47.2 8.4 80 217-311 46-127 (212)
296 3qfe_A Putative dihydrodipicol 95.1 0.12 4.2E-06 48.9 10.7 92 242-334 38-134 (318)
297 3bjs_A Mandelate racemase/muco 95.1 0.081 2.8E-06 52.2 9.7 118 136-312 183-311 (428)
298 3dg3_A Muconate cycloisomerase 95.1 0.22 7.5E-06 48.0 12.5 123 135-316 137-270 (367)
299 3fa4_A 2,3-dimethylmalate lyas 95.1 1.2 4.2E-05 41.7 17.1 67 242-318 176-245 (302)
300 1o5k_A DHDPS, dihydrodipicolin 95.1 0.096 3.3E-06 49.3 9.7 89 242-333 39-132 (306)
301 3eb2_A Putative dihydrodipicol 95.0 2.2 7.7E-05 39.7 19.4 182 75-316 9-212 (300)
302 2e6f_A Dihydroorotate dehydrog 95.0 0.041 1.4E-06 51.8 7.0 110 125-256 160-273 (314)
303 4fxs_A Inosine-5'-monophosphat 95.0 0.066 2.3E-06 53.9 8.9 247 45-312 12-300 (496)
304 1h1y_A D-ribulose-5-phosphate 95.0 0.22 7.4E-06 44.6 11.5 126 135-314 15-147 (228)
305 1vli_A Spore coat polysacchari 95.0 0.34 1.2E-05 47.1 13.4 84 217-311 103-190 (385)
306 3ru6_A Orotidine 5'-phosphate 95.0 0.054 1.8E-06 51.0 7.6 64 240-317 162-235 (303)
307 4af0_A Inosine-5'-monophosphat 94.9 0.063 2.2E-06 54.2 8.4 248 44-313 60-351 (556)
308 4e5t_A Mandelate racemase / mu 94.9 0.12 4.2E-06 50.5 10.4 132 136-313 150-290 (404)
309 3ffs_A Inosine-5-monophosphate 94.9 0.051 1.7E-06 53.3 7.5 67 239-312 146-212 (400)
310 3q45_A Mandelate racemase/muco 94.9 0.2 6.9E-06 48.3 11.7 120 136-314 139-267 (368)
311 3e96_A Dihydrodipicolinate syn 94.9 0.075 2.6E-06 50.3 8.5 91 243-337 40-135 (316)
312 3d0c_A Dihydrodipicolinate syn 94.9 0.085 2.9E-06 49.9 8.8 90 243-336 40-134 (314)
313 2hjp_A Phosphonopyruvate hydro 94.9 0.98 3.4E-05 42.1 16.0 71 240-318 170-241 (290)
314 2poz_A Putative dehydratase; o 94.9 0.18 6E-06 49.0 11.4 136 136-312 136-280 (392)
315 2vc6_A MOSA, dihydrodipicolina 94.9 0.095 3.2E-06 49.0 9.0 90 242-334 27-121 (292)
316 1sjd_A N-acylamino acid racema 94.8 0.25 8.4E-06 47.5 12.2 116 136-312 140-263 (368)
317 2gl5_A Putative dehydratase pr 94.8 0.15 5.1E-06 49.8 10.8 88 215-312 203-299 (410)
318 2ze3_A DFA0005; organic waste 94.8 2.4 8.1E-05 39.2 18.4 87 218-318 130-238 (275)
319 3gr7_A NADPH dehydrogenase; fl 94.8 0.35 1.2E-05 46.2 13.0 94 122-256 206-307 (340)
320 3tfx_A Orotidine 5'-phosphate 94.8 0.095 3.2E-06 48.3 8.6 79 241-339 149-237 (259)
321 2o56_A Putative mandelate race 94.7 0.17 5.9E-06 49.3 10.9 135 137-312 152-296 (407)
322 2hxt_A L-fuconate dehydratase; 94.7 0.17 6E-06 49.9 11.1 119 137-313 198-325 (441)
323 1z41_A YQJM, probable NADH-dep 94.7 0.27 9.3E-06 46.8 12.1 94 122-256 206-307 (338)
324 3qze_A DHDPS, dihydrodipicolin 94.7 2.8 9.7E-05 39.3 19.4 182 75-316 28-231 (314)
325 3s5o_A 4-hydroxy-2-oxoglutarat 94.7 0.13 4.5E-06 48.4 9.7 92 243-335 42-138 (307)
326 2wqp_A Polysialic acid capsule 94.7 0.49 1.7E-05 45.4 13.5 143 135-311 31-180 (349)
327 3h5d_A DHDPS, dihydrodipicolin 94.7 0.18 6E-06 47.7 10.4 90 242-334 34-129 (311)
328 3toy_A Mandelate racemase/muco 94.7 0.26 9E-06 47.8 11.9 120 136-313 166-295 (383)
329 3b8i_A PA4872 oxaloacetate dec 94.7 0.48 1.7E-05 44.2 13.2 188 76-318 21-240 (287)
330 3tj4_A Mandelate racemase; eno 94.6 0.22 7.6E-06 48.1 11.2 119 137-313 151-279 (372)
331 4ef8_A Dihydroorotate dehydrog 94.6 0.078 2.7E-06 51.1 7.9 114 122-256 190-306 (354)
332 3ugv_A Enolase; enzyme functio 94.6 0.33 1.1E-05 47.2 12.5 90 216-315 205-303 (390)
333 1f76_A Dihydroorotate dehydrog 94.6 0.12 4.2E-06 49.0 9.2 104 125-256 211-318 (336)
334 3ldv_A Orotidine 5'-phosphate 94.6 0.088 3E-06 48.4 7.8 79 240-338 166-254 (255)
335 3i65_A Dihydroorotate dehydrog 94.5 0.081 2.8E-06 52.0 7.9 102 126-256 269-374 (415)
336 3mwc_A Mandelate racemase/muco 94.5 0.53 1.8E-05 45.9 13.8 116 138-314 164-287 (400)
337 2zad_A Muconate cycloisomerase 94.5 0.65 2.2E-05 44.1 14.1 117 136-311 138-264 (345)
338 1mzh_A Deoxyribose-phosphate a 94.5 0.29 9.8E-06 43.9 10.9 88 120-256 111-204 (225)
339 3r4e_A Mandelate racemase/muco 94.5 0.15 5.3E-06 50.1 9.8 153 135-313 141-302 (418)
340 2ehh_A DHDPS, dihydrodipicolin 94.5 3.1 0.00011 38.6 19.4 180 76-316 7-209 (294)
341 1m3u_A 3-methyl-2-oxobutanoate 94.4 1.1 3.8E-05 41.2 14.8 39 240-290 165-203 (264)
342 3sbf_A Mandelate racemase / mu 94.4 0.19 6.6E-06 49.0 10.4 145 135-314 131-284 (401)
343 3ro6_B Putative chloromuconate 94.4 0.45 1.5E-05 45.6 12.8 121 136-315 139-269 (356)
344 3dz1_A Dihydrodipicolinate syn 94.4 0.25 8.7E-06 46.6 10.9 92 242-338 35-131 (313)
345 3mqt_A Mandelate racemase/muco 94.4 0.21 7.1E-06 48.7 10.5 88 216-313 186-283 (394)
346 3ddm_A Putative mandelate race 94.4 0.17 5.8E-06 49.3 9.9 87 216-312 185-281 (392)
347 3eb2_A Putative dihydrodipicol 94.4 0.06 2E-06 50.6 6.3 89 243-334 32-125 (300)
348 4e4u_A Mandalate racemase/muco 94.3 0.2 6.9E-06 49.1 10.3 132 136-313 143-283 (412)
349 3a5f_A Dihydrodipicolinate syn 94.3 0.1 3.6E-06 48.7 7.8 77 242-318 28-109 (291)
350 2hmc_A AGR_L_411P, dihydrodipi 94.2 0.19 6.5E-06 48.1 9.7 89 242-335 53-146 (344)
351 3vav_A 3-methyl-2-oxobutanoate 94.2 0.43 1.5E-05 44.1 11.6 97 214-312 15-126 (275)
352 2r8w_A AGR_C_1641P; APC7498, d 94.2 3.8 0.00013 38.7 19.0 185 76-316 40-246 (332)
353 3mkc_A Racemase; metabolic pro 94.2 0.26 8.9E-06 48.0 10.8 88 216-313 191-288 (394)
354 2ox4_A Putative mandelate race 94.2 0.17 5.7E-06 49.4 9.4 136 137-313 146-291 (403)
355 4adt_A Pyridoxine biosynthetic 94.2 0.15 5.2E-06 47.8 8.7 85 222-309 15-104 (297)
356 3iwp_A Copper homeostasis prot 94.2 0.15 5.1E-06 47.5 8.4 73 236-312 46-131 (287)
357 4dpp_A DHDPS 2, dihydrodipicol 94.2 0.19 6.4E-06 48.5 9.4 90 242-334 86-180 (360)
358 3fok_A Uncharacterized protein 94.2 0.2 6.8E-06 47.0 9.3 79 225-317 173-278 (307)
359 3ajx_A 3-hexulose-6-phosphate 94.1 1.1 3.7E-05 39.0 13.8 87 218-313 42-135 (207)
360 1v5x_A PRA isomerase, phosphor 94.1 0.89 3E-05 40.1 13.2 86 217-315 87-177 (203)
361 3tji_A Mandelate racemase/muco 94.0 0.28 9.7E-06 48.2 10.6 144 135-313 152-304 (422)
362 3vcn_A Mannonate dehydratase; 94.0 0.45 1.5E-05 46.8 12.0 153 135-313 148-309 (425)
363 1vrd_A Inosine-5'-monophosphat 93.9 0.15 5.2E-06 51.1 8.7 69 239-313 239-307 (494)
364 3tr2_A Orotidine 5'-phosphate 93.9 0.12 3.9E-06 47.1 7.1 79 241-339 149-237 (239)
365 2qq6_A Mandelate racemase/muco 93.9 0.27 9.3E-06 48.0 10.3 88 215-312 195-291 (410)
366 3go2_A Putative L-alanine-DL-g 93.9 0.55 1.9E-05 45.9 12.5 86 216-313 199-293 (409)
367 1o5k_A DHDPS, dihydrodipicolin 93.9 4.2 0.00014 37.9 18.2 181 75-316 18-224 (306)
368 1qop_A Tryptophan synthase alp 93.8 0.27 9.2E-06 45.2 9.6 42 216-257 193-235 (268)
369 1r0m_A N-acylamino acid racema 93.8 0.59 2E-05 44.9 12.3 116 136-312 147-269 (375)
370 3vav_A 3-methyl-2-oxobutanoate 93.7 4.2 0.00014 37.5 17.3 39 240-290 177-215 (275)
371 2yyu_A Orotidine 5'-phosphate 93.7 0.14 4.6E-06 46.7 7.2 75 245-339 152-236 (246)
372 1chr_A Chloromuconate cycloiso 93.7 0.44 1.5E-05 45.9 11.2 88 216-313 174-270 (370)
373 2rfg_A Dihydrodipicolinate syn 93.6 3.7 0.00013 38.1 17.2 180 76-316 7-208 (297)
374 3my9_A Muconate cycloisomerase 93.6 1.1 3.7E-05 43.2 13.8 89 216-314 177-274 (377)
375 1xky_A Dihydrodipicolinate syn 93.6 4.6 0.00016 37.6 20.7 183 75-317 17-221 (301)
376 1twd_A Copper homeostasis prot 93.6 0.32 1.1E-05 44.5 9.3 74 236-313 8-94 (256)
377 2v9d_A YAGE; dihydrodipicolini 93.6 5.1 0.00018 38.0 18.6 181 75-315 36-242 (343)
378 1eix_A Orotidine 5'-monophosph 93.6 0.11 3.7E-06 47.3 6.3 59 245-317 158-226 (245)
379 1vyr_A Pentaerythritol tetrani 93.5 0.54 1.9E-05 45.3 11.5 41 216-256 282-323 (364)
380 3tak_A DHDPS, dihydrodipicolin 93.5 4.7 0.00016 37.3 20.0 181 76-316 7-209 (291)
381 2zc8_A N-acylamino acid racema 93.5 0.75 2.6E-05 44.0 12.5 116 136-312 140-262 (369)
382 3h5d_A DHDPS, dihydrodipicolin 93.5 5 0.00017 37.6 20.2 182 75-316 12-215 (311)
383 3v3w_A Starvation sensing prot 93.5 0.39 1.3E-05 47.2 10.6 153 135-313 147-308 (424)
384 3usb_A Inosine-5'-monophosphat 93.5 0.2 6.8E-06 50.6 8.6 247 45-312 36-325 (511)
385 1tv5_A Dhodehase, dihydroorota 93.4 0.38 1.3E-05 47.7 10.4 102 126-256 297-402 (443)
386 3oa3_A Aldolase; structural ge 93.4 1.5 5.1E-05 40.8 13.7 168 91-315 27-211 (288)
387 3g8r_A Probable spore coat pol 93.4 0.91 3.1E-05 43.5 12.6 85 215-310 75-166 (350)
388 3m5v_A DHDPS, dihydrodipicolin 93.4 5 0.00017 37.3 19.5 180 75-316 13-216 (301)
389 1oy0_A Ketopantoate hydroxymet 93.4 3.1 0.00011 38.5 15.8 133 93-291 43-222 (281)
390 3gd6_A Muconate cycloisomerase 93.3 1.3 4.5E-05 42.9 14.0 119 136-315 141-271 (391)
391 2htm_A Thiazole biosynthesis p 93.3 0.15 5.2E-06 46.8 6.8 42 216-257 164-208 (268)
392 3a5f_A Dihydrodipicolinate syn 93.3 3.2 0.00011 38.5 16.1 181 75-316 7-209 (291)
393 4aaj_A N-(5'-phosphoribosyl)an 93.2 0.85 2.9E-05 41.0 11.6 95 212-315 99-205 (228)
394 3daq_A DHDPS, dihydrodipicolin 93.2 3.7 0.00013 38.0 16.3 180 75-315 8-210 (292)
395 1eep_A Inosine 5'-monophosphat 93.1 0.23 7.8E-06 48.5 8.3 68 239-312 155-222 (404)
396 3hgj_A Chromate reductase; TIM 93.1 0.77 2.6E-05 43.8 11.8 91 126-256 220-318 (349)
397 3na8_A Putative dihydrodipicol 93.1 5.7 0.0002 37.2 22.8 181 75-315 29-232 (315)
398 1gvf_A Tagatose-bisphosphate a 93.1 1.7 5.8E-05 40.4 13.7 107 237-348 155-281 (286)
399 3dz1_A Dihydrodipicolinate syn 93.1 5.8 0.0002 37.1 19.0 179 75-313 13-220 (313)
400 1tqj_A Ribulose-phosphate 3-ep 93.0 0.59 2E-05 41.9 10.2 42 215-256 155-201 (230)
401 2gjl_A Hypothetical protein PA 93.0 0.46 1.6E-05 44.9 10.0 80 218-311 57-144 (328)
402 3oix_A Putative dihydroorotate 93.0 0.24 8.3E-06 47.4 8.0 42 215-256 260-304 (345)
403 3r0u_A Enzyme of enolase super 93.0 3 0.0001 40.2 15.9 121 136-315 141-272 (379)
404 3ngj_A Deoxyribose-phosphate a 93.0 0.88 3E-05 41.2 11.2 76 240-315 99-180 (239)
405 1vhn_A Putative flavin oxidore 92.9 0.25 8.4E-06 46.6 7.9 91 120-256 121-213 (318)
406 2gou_A Oxidoreductase, FMN-bin 92.9 0.49 1.7E-05 45.6 10.2 41 216-256 281-322 (365)
407 2c6q_A GMP reductase 2; TIM ba 92.9 0.3 1E-05 46.9 8.6 66 241-312 122-189 (351)
408 1dbt_A Orotidine 5'-phosphate 92.9 0.14 4.9E-06 46.3 6.0 77 243-339 149-235 (239)
409 3l5l_A Xenobiotic reductase A; 92.9 0.57 1.9E-05 45.1 10.6 90 126-255 226-324 (363)
410 3d0c_A Dihydrodipicolinate syn 92.8 6.3 0.00021 36.9 18.4 179 76-315 17-217 (314)
411 3q94_A Fructose-bisphosphate a 92.8 2.8 9.4E-05 39.0 14.7 109 237-348 159-285 (288)
412 2zbt_A Pyridoxal biosynthesis 92.8 0.33 1.1E-05 45.1 8.5 77 227-309 20-104 (297)
413 3o07_A Pyridoxine biosynthesis 92.7 0.13 4.5E-06 47.6 5.4 62 215-280 185-249 (291)
414 1ujp_A Tryptophan synthase alp 92.7 0.2 6.9E-06 46.3 6.7 40 216-257 190-230 (271)
415 2fli_A Ribulose-phosphate 3-ep 92.7 0.75 2.6E-05 40.4 10.3 39 218-256 155-198 (220)
416 3t6c_A RSPA, putative MAND fam 92.6 0.74 2.5E-05 45.5 11.2 89 216-314 226-323 (440)
417 3pm6_A Putative fructose-bisph 92.6 1.5 5E-05 41.2 12.4 113 237-349 172-297 (306)
418 3f4w_A Putative hexulose 6 pho 92.5 1.7 5.9E-05 37.8 12.4 88 217-312 41-134 (211)
419 2nv1_A Pyridoxal biosynthesis 92.5 1.4 4.8E-05 41.1 12.4 87 216-310 9-105 (305)
420 3bw2_A 2-nitropropane dioxygen 92.4 1.3 4.5E-05 42.4 12.5 41 216-256 196-237 (369)
421 3i6e_A Muconate cycloisomerase 92.4 0.91 3.1E-05 43.9 11.3 89 216-314 179-275 (385)
422 1yad_A Regulatory protein TENI 92.3 1.7 5.9E-05 38.2 12.2 44 214-257 150-193 (221)
423 1xi3_A Thiamine phosphate pyro 92.3 1.8 6.2E-05 37.5 12.2 44 214-257 148-191 (215)
424 3hjz_A Transaldolase B; parach 92.3 1.2 4E-05 42.4 11.5 99 216-319 140-256 (334)
425 1ep3_A Dihydroorotate dehydrog 92.2 0.51 1.8E-05 43.8 9.1 41 216-256 229-270 (311)
426 2tps_A Protein (thiamin phosph 92.2 1 3.5E-05 39.6 10.6 43 215-257 158-201 (227)
427 2isw_A Putative fructose-1,6-b 92.0 3.2 0.00011 39.2 14.1 108 237-348 153-304 (323)
428 2wkj_A N-acetylneuraminate lya 91.9 7.9 0.00027 36.0 19.8 188 66-317 10-220 (303)
429 3tha_A Tryptophan synthase alp 91.8 0.35 1.2E-05 44.3 7.1 40 217-257 188-228 (252)
430 3vk5_A MOEO5; TIM barrel, tran 91.7 0.24 8.4E-06 45.9 5.9 43 215-257 212-257 (286)
431 3p3b_A Mandelate racemase/muco 91.6 0.5 1.7E-05 45.9 8.5 125 139-313 150-286 (392)
432 3bo9_A Putative nitroalkan dio 91.6 0.66 2.3E-05 43.9 9.1 81 217-311 66-150 (326)
433 2yxg_A DHDPS, dihydrodipicolin 91.5 8.5 0.00029 35.5 18.4 178 76-316 7-207 (289)
434 2ojp_A DHDPS, dihydrodipicolin 91.3 7.5 0.00026 35.9 15.9 182 76-316 7-209 (292)
435 3n9r_A Fructose-bisphosphate a 91.0 4.6 0.00016 37.8 14.0 110 237-348 155-304 (307)
436 3fs2_A 2-dehydro-3-deoxyphosph 91.0 0.62 2.1E-05 43.6 8.0 96 216-315 144-263 (298)
437 2r91_A 2-keto-3-deoxy-(6-phosp 90.9 1.7 5.7E-05 40.3 10.9 89 242-336 25-119 (286)
438 2r14_A Morphinone reductase; H 90.8 0.94 3.2E-05 43.8 9.5 40 217-256 288-328 (377)
439 1vkf_A Glycerol uptake operon 90.8 2 6.8E-05 37.4 10.5 36 218-257 142-178 (188)
440 1vqt_A Orotidine 5'-phosphate 90.8 0.18 6.1E-06 44.9 3.9 58 242-318 132-198 (213)
441 3tcs_A Racemase, putative; PSI 90.7 3.8 0.00013 39.6 13.7 89 216-314 185-282 (388)
442 2ekc_A AQ_1548, tryptophan syn 90.6 0.34 1.2E-05 44.4 5.8 40 217-257 195-235 (262)
443 2z6i_A Trans-2-enoyl-ACP reduc 90.4 1.3 4.3E-05 42.0 9.8 80 218-311 53-136 (332)
444 1w3i_A EDA, 2-keto-3-deoxy glu 90.4 11 0.00037 34.8 19.1 177 76-315 5-200 (293)
445 3l21_A DHDPS, dihydrodipicolin 90.2 12 0.0004 34.9 20.1 181 75-317 20-222 (304)
446 1p0k_A Isopentenyl-diphosphate 90.2 2 6.7E-05 40.8 11.0 41 216-256 238-280 (349)
447 2bdq_A Copper homeostasis prot 90.1 0.31 1.1E-05 43.7 4.9 70 237-313 9-97 (224)
448 3tkf_A Transaldolase; structur 90.1 4.9 0.00017 38.3 13.5 101 216-320 163-281 (345)
449 3dgb_A Muconate cycloisomerase 90.1 3.5 0.00012 39.7 12.9 89 216-314 180-277 (382)
450 1ea0_A Glutamate synthase [NAD 90.0 2.9 9.9E-05 47.1 13.4 120 240-359 591-725 (1479)
451 3o63_A Probable thiamine-phosp 90.0 2.8 9.6E-05 37.9 11.3 44 214-257 175-220 (243)
452 1w8s_A FBP aldolase, fructose- 89.9 4.5 0.00015 36.9 12.7 73 240-314 96-181 (263)
453 4e4f_A Mannonate dehydratase; 89.8 1.4 4.8E-05 43.3 9.9 88 216-313 214-310 (426)
454 1gox_A (S)-2-hydroxy-acid oxid 89.8 2.9 9.8E-05 40.2 11.9 42 269-313 213-254 (370)
455 1ub3_A Aldolase protein; schif 89.6 1.9 6.6E-05 38.4 9.8 76 240-315 75-156 (220)
456 1n7k_A Deoxyribose-phosphate a 89.6 2.5 8.5E-05 38.1 10.5 73 240-315 92-171 (234)
457 3ovp_A Ribulose-phosphate 3-ep 89.6 3.5 0.00012 36.8 11.6 41 216-256 156-197 (228)
458 3vzx_A Heptaprenylglyceryl pho 89.5 0.45 1.6E-05 42.8 5.5 41 216-257 167-209 (228)
459 3fv9_G Mandelate racemase/muco 89.4 4.1 0.00014 39.3 12.8 124 135-313 143-274 (386)
460 3cpr_A Dihydrodipicolinate syn 89.4 13 0.00046 34.4 20.5 180 75-316 21-222 (304)
461 4dye_A Isomerase; enolase fami 89.4 3.2 0.00011 40.2 12.0 88 216-315 199-294 (398)
462 1rvg_A Fructose-1,6-bisphospha 89.2 11 0.00038 35.2 15.0 109 237-348 153-302 (305)
463 1w3i_A EDA, 2-keto-3-deoxy glu 89.2 1.8 6.3E-05 40.1 9.7 89 242-336 26-120 (293)
464 2hjp_A Phosphonopyruvate hydro 89.2 2.7 9.3E-05 39.1 10.8 92 220-312 7-110 (290)
465 3m16_A Transaldolase; dimer, m 89.1 5.3 0.00018 37.8 12.9 103 216-320 144-261 (329)
466 3eoo_A Methylisocitrate lyase; 89.1 3.3 0.00011 38.7 11.3 92 219-313 13-119 (298)
467 3sz8_A 2-dehydro-3-deoxyphosph 89.1 2.3 8E-05 39.4 10.2 125 216-347 123-278 (285)
468 3jr2_A Hexulose-6-phosphate sy 89.1 4 0.00014 35.9 11.5 87 217-312 47-139 (218)
469 3dip_A Enolase; structural gen 89.0 1.9 6.5E-05 42.1 10.1 88 216-313 199-296 (410)
470 1viz_A PCRB protein homolog; s 89.0 0.46 1.6E-05 43.1 5.2 41 216-257 169-211 (240)
471 3s5o_A 4-hydroxy-2-oxoglutarat 88.9 15 0.0005 34.2 18.8 184 75-316 19-225 (307)
472 1xg4_A Probable methylisocitra 88.9 5.2 0.00018 37.3 12.5 90 220-312 9-114 (295)
473 3sgz_A Hydroxyacid oxidase 2; 88.9 2.7 9.1E-05 40.3 10.7 41 216-256 258-301 (352)
474 3kru_A NADH:flavin oxidoreduct 88.8 3.9 0.00013 38.9 11.9 42 215-256 264-307 (343)
475 3b4u_A Dihydrodipicolinate syn 88.8 14 0.0005 34.0 20.4 181 76-316 9-216 (294)
476 3w01_A Heptaprenylglyceryl pho 88.7 0.47 1.6E-05 42.9 5.0 41 216-257 173-215 (235)
477 2nuw_A 2-keto-3-deoxygluconate 88.6 1.8 6.3E-05 40.0 9.3 88 242-335 26-119 (288)
478 2nli_A Lactate oxidase; flavoe 88.6 1.6 5.6E-05 41.9 9.2 41 216-256 270-313 (368)
479 3b8i_A PA4872 oxaloacetate dec 88.5 2.3 7.8E-05 39.6 9.7 93 220-313 13-118 (287)
480 3ih1_A Methylisocitrate lyase; 88.5 5.6 0.00019 37.2 12.5 90 220-313 21-125 (305)
481 3aty_A Tcoye, prostaglandin F2 88.4 2 6.9E-05 41.5 9.7 38 218-256 298-336 (379)
482 3fcp_A L-Ala-D/L-Glu epimerase 88.3 5.6 0.00019 38.2 12.8 89 216-314 179-276 (381)
483 1o66_A 3-methyl-2-oxobutanoate 88.3 6.8 0.00023 36.1 12.6 94 216-311 5-114 (275)
484 1me8_A Inosine-5'-monophosphat 88.0 1.1 3.8E-05 45.0 7.8 70 239-313 244-313 (503)
485 3qfe_A Putative dihydrodipicol 88.0 17 0.00059 33.9 17.7 183 75-315 15-223 (318)
486 2qkf_A 3-deoxy-D-manno-octulos 87.9 2.5 8.5E-05 39.1 9.6 98 216-316 118-240 (280)
487 3fa4_A 2,3-dimethylmalate lyas 87.9 3.1 0.0001 39.0 10.2 95 219-313 8-116 (302)
488 3tml_A 2-dehydro-3-deoxyphosph 87.9 1.6 5.6E-05 40.5 8.3 95 216-315 120-245 (288)
489 2f6u_A GGGPS, (S)-3-O-geranylg 87.9 0.45 1.5E-05 43.0 4.4 41 216-257 177-219 (234)
490 4a29_A Engineered retro-aldol 87.8 1.9 6.6E-05 39.3 8.5 72 238-315 65-136 (258)
491 1zlp_A PSR132, petal death pro 87.8 6.8 0.00023 36.9 12.6 91 220-312 31-136 (318)
492 1m3u_A 3-methyl-2-oxobutanoate 87.7 6.8 0.00023 35.9 12.2 94 216-311 5-113 (264)
493 3sr7_A Isopentenyl-diphosphate 87.6 1.1 3.9E-05 43.1 7.3 82 228-312 144-237 (365)
494 1s2w_A Phosphoenolpyruvate pho 87.6 2.7 9.3E-05 39.2 9.7 91 220-313 11-115 (295)
495 1o60_A 2-dehydro-3-deoxyphosph 87.5 2.1 7.3E-05 39.8 8.9 98 216-316 121-243 (292)
496 3r12_A Deoxyribose-phosphate a 87.4 6.7 0.00023 35.8 11.9 76 240-315 115-196 (260)
497 3lye_A Oxaloacetate acetyl hyd 87.3 4.2 0.00014 38.1 10.8 96 218-313 14-124 (307)
498 4a35_A Mitochondrial enolase s 87.2 6.5 0.00022 38.7 12.7 120 137-313 201-330 (441)
499 3ik4_A Mandelate racemase/muco 87.1 13 0.00044 35.4 14.5 122 136-313 142-271 (365)
500 3noy_A 4-hydroxy-3-methylbut-2 86.9 2.6 8.8E-05 40.3 9.1 70 136-256 43-112 (366)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=3.3e-81 Score=607.51 Aligned_cols=347 Identities=45% Similarity=0.735 Sum_probs=320.8
Q ss_pred CCChHHHHHHHHhhCCcchhhhhcCCccchhhHHHhHhccccceeeccccCCCCCCccceeecCcccCcceeeccccccc
Q 017434 7 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQK 86 (371)
Q Consensus 7 ~~~~~d~~~~A~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~ 86 (371)
++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|+|++++||+|++||+++++||++||+++++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccCC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017434 87 MAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRL 165 (371)
Q Consensus 87 ~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~ 165 (371)
+.||+||+++||+|+++|+++++|+++++++|||++..+ ++.|||||+++|++.++++++||+++||++|++|||+|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999887 7899999999999999999999999999999999999999
Q ss_pred cchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHH
Q 017434 166 GRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLA 245 (371)
Q Consensus 166 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a 245 (371)
|+|++|+|++|.+|++++.+++.+.. ......+ ......++.++|++|+++|+.+++||++|++.++++|+.+
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~----~~~~~~~---~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a 234 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALK----EEKPTQS---VPVLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELA 234 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHH
T ss_pred CcchhhhhcCCCCCcccchhhhcccc----cccccch---hhhhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 99999999999988766665543211 0000111 1113457889999999999999999999999999999999
Q ss_pred HHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChH
Q 017434 246 IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEA 325 (371)
Q Consensus 246 ~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~ 325 (371)
.++|+|+|+|+||||+++++++++++.|+++++++.+++|||++|||+++.|++|+|++|||+|++||||+|++++.|++
T Consensus 235 ~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~ 314 (352)
T 3sgz_A 235 MKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGED 314 (352)
T ss_dssp HHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcH
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceec
Q 017434 326 GVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVT 360 (371)
Q Consensus 326 gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~ 360 (371)
||.++++.+++||+.+|.++|+.+++|++++.++.
T Consensus 315 gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~y 349 (352)
T 3sgz_A 315 GVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcchh
Confidence 99999999999999999999999999999998864
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=6.7e-74 Score=567.46 Aligned_cols=358 Identities=54% Similarity=0.895 Sum_probs=320.8
Q ss_pred ccCCChHHHHHHHHhhCCcchhhhhcCCccchhhHHHhHhccccceeeccccCCCCCCccceeecCcccCcceeeccccc
Q 017434 5 SEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAF 84 (371)
Q Consensus 5 ~~~~~~~d~~~~A~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~ 84 (371)
.++.|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|++++++||+|+|+|+++++||++||||+
T Consensus 25 ~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~ 104 (392)
T 2nzl_A 25 PRLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAM 104 (392)
T ss_dssp -CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEeccccc
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccCC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCC
Q 017434 85 QKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTP 163 (371)
Q Consensus 85 ~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p 163 (371)
+.+.||++|.++|++|+++|+++++|+++++++|++.+..+ .+.|||||.++|++.+.+++++++++|++++++|+|||
T Consensus 105 ~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p 184 (392)
T 2nzl_A 105 QRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTP 184 (392)
T ss_dssp GGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCS
T ss_pred cccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 99999999999999999999999999999999999987654 78999999999999999999999999999999999999
Q ss_pred CCcchhHHhhhhcCCCCccccccccccccC-CCC-C-CCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHH
Q 017434 164 RLGRREADIKNRFVLPPHLTLKNYEGLYIG-KMD-K-TDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAE 240 (371)
Q Consensus 164 ~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e 240 (371)
+.|+|++|+|++|.+|.++..+++...... ... . ..+++...++....++.++|++|+++++.+++||++|++.+++
T Consensus 185 ~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e 264 (392)
T 2nzl_A 185 YLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGD 264 (392)
T ss_dssp SCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHH
T ss_pred CccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHH
Confidence 999999999999999987755543211000 000 0 1112223456656688899999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhh
Q 017434 241 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLA 320 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~ 320 (371)
+|+.+.++|+|+|+|+||||++.++++++++.|+++++++++++|||++|||+++.|++|+|++|||+|++||||+++++
T Consensus 265 ~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~ 344 (392)
T 2nzl_A 265 DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLA 344 (392)
T ss_dssp HHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHH
Confidence 99999999999999999999999999999999999999987679999999999999999999999999999999999998
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeccc
Q 017434 321 VDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHW 362 (371)
Q Consensus 321 ~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~~ 362 (371)
+.|++|++++++.+++||+.+|.++|+.+++||++..+...+
T Consensus 345 ~~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~ 386 (392)
T 2nzl_A 345 FQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKNP 386 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC---
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhCc
Confidence 889999999999999999999999999999999999887643
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=4.7e-73 Score=557.72 Aligned_cols=352 Identities=34% Similarity=0.573 Sum_probs=307.8
Q ss_pred cccCCChHHHHHHHHhhCCcchhhhhcCCccchhhHHHhHhccccceeeccccCCCCCCccceeecCcccCcceeecccc
Q 017434 4 ISEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTA 83 (371)
Q Consensus 4 ~~~~~~~~d~~~~A~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~ 83 (371)
+..+.|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|+++++||++|||+
T Consensus 10 ~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma 89 (368)
T 2nli_A 10 YIDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIA 89 (368)
T ss_dssp CCCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCS
T ss_pred hccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchh
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccC-CCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCC
Q 017434 84 FQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTG-PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (371)
Q Consensus 84 ~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~-~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~ 162 (371)
++++.||++|.+++++|+++|+++++|+++++++|++.+.. +.+.|||||+++|++.+.+++++++++|+++++||+||
T Consensus 90 ~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~ 169 (368)
T 2nli_A 90 AHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADS 169 (368)
T ss_dssp CGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBC
T ss_pred hccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 99999999999999999999999999999999999998764 37899999999999999999999999999999999999
Q ss_pred CCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHH
Q 017434 163 PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDA 242 (371)
Q Consensus 163 p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a 242 (371)
|+.|+|++|++++|.+| +...++.... .. ...+++. .+++...++.++|++|+++|+.+++||++|++.+++++
T Consensus 170 p~~g~r~~d~~~~~~~p--~~~~~~~~~~-~~--~~~g~~l-~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a 243 (368)
T 2nli_A 170 TVSGNRDRDVKNKFVYP--FGMPIVQRYL-RG--TAEGMSL-NNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDA 243 (368)
T ss_dssp C---CBC--------CC--SCCHHHHHHH-TT--SGGGC------CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHH
T ss_pred CcccchhHHHhhcccCc--chhhhhhccc-cc--CCCCchH-HhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHH
Confidence 99999999999999877 2222221000 00 0011111 23444457889999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcC
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVD 322 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~ 322 (371)
+.+.++|+|+|+|+||||+++++++++++.++++++++++++|||++|||+++.|++|+|++|||+|+|||||++++++.
T Consensus 244 ~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~ 323 (368)
T 2nli_A 244 DMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALG 323 (368)
T ss_dssp HHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhc
Confidence 99999999999999999999999999999999999998768999999999999999999999999999999999999888
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceecc
Q 017434 323 GEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTH 361 (371)
Q Consensus 323 G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~ 361 (371)
|++||.++++.+++||+.+|.++|+.+++|+++..+...
T Consensus 324 G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~ 362 (368)
T 2nli_A 324 GWQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDN 362 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEEC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccccEeec
Confidence 999999999999999999999999999999999988654
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=4.2e-72 Score=552.22 Aligned_cols=366 Identities=86% Similarity=1.280 Sum_probs=326.3
Q ss_pred cCCChHHHHHHHHhhCCcchhhhhcCCccchhhHHHhHhccccceeeccccCCCCCCccceeecCcccCcceeecccccc
Q 017434 6 EITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQ 85 (371)
Q Consensus 6 ~~~~~~d~~~~A~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~ 85 (371)
++.|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|+++++||++|||+++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017434 86 KMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRL 165 (371)
Q Consensus 86 ~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~ 165 (371)
.+.||++|.+++++|+++|+++++|+++++++||+++..+++.|||||.+.|++.+.+++++++++|+++++||+|||+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999987778899999999999999999999999999999999999999
Q ss_pred cchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHH
Q 017434 166 GRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLA 245 (371)
Q Consensus 166 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a 245 (371)
|+|+++++++|.+|.+++.+++............++....++++..++.+.|+.++++++.+++|+++|++.++++++.+
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a 242 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLA 242 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHH
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHH
Confidence 99999999999888777655542211000001112222345665678889999999999999999999999999999999
Q ss_pred HHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChH
Q 017434 246 IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEA 325 (371)
Q Consensus 246 ~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~ 325 (371)
.++|+|+|+|+||||+++++++++++.++++++.+++++|||++|||++++|+.|++++|||+|++||++++++++.|++
T Consensus 243 ~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~ 322 (370)
T 1gox_A 243 VQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEA 322 (370)
T ss_dssp HHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHH
T ss_pred HHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHH
Confidence 99999999999999999999999999999999988768999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceecccC--CCccccCC
Q 017434 326 GVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHWD--TPGAVARL 371 (371)
Q Consensus 326 gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~~~--~~~~~~~~ 371 (371)
||.++++.+++||+.+|.++|+.+++|++++.+....+ +-++++||
T Consensus 323 gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~~~~~~~~~~ 370 (370)
T 1gox_A 323 GVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 370 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC----------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccccccccchhhcC
Confidence 99999999999999999999999999999999987766 56777775
No 5
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=7.3e-69 Score=530.46 Aligned_cols=356 Identities=41% Similarity=0.703 Sum_probs=316.6
Q ss_pred ccCCChHHHHHHHHhhCCcchhhhhcCCccchhhHHHhHhccccceeeccccCCCCCCccceeecCcccCcceeeccccc
Q 017434 5 SEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAF 84 (371)
Q Consensus 5 ~~~~~~~d~~~~A~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~ 84 (371)
.+++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|+++++||++|||++
T Consensus 3 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~ 82 (380)
T 1p4c_A 3 QNLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGL 82 (380)
T ss_dssp -CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred CcCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCccc
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCC
Q 017434 85 QKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (371)
Q Consensus 85 ~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~ 164 (371)
+++.||++|.+++++|+++|+++++|+.+++++|++....+++.|||||+++ ++...+++++++++|+++++||+|+|+
T Consensus 83 ~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~ 161 (380)
T 1p4c_A 83 NGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAV 161 (380)
T ss_dssp GGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred cccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCcc
Confidence 9999999999999999999999999999999999998765578999999988 899999999999999999999999999
Q ss_pred CcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHH
Q 017434 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASL 244 (371)
Q Consensus 165 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~ 244 (371)
.|+|++|+++++..|..++..++..............+...++....+|+++|+.|+++++.+++||++|++.++++++.
T Consensus 162 ~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~ 241 (380)
T 1p4c_A 162 NGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADR 241 (380)
T ss_dssp CCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHHHH
T ss_pred ccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHHHH
Confidence 99999999999977755544332100000010011111222233234788999999999999999999999999999999
Q ss_pred HHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCCh
Q 017434 245 AIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGE 324 (371)
Q Consensus 245 a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~ 324 (371)
+.++|+|+|+|+||||++.++++++++.++++++.+ ++|||++|||++++|+.|++++|||+|++||++++++.+.|+
T Consensus 242 a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~ 319 (380)
T 1p4c_A 242 CIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGE 319 (380)
T ss_dssp HHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCH
Confidence 999999999999999999999999999999999988 569999999999999999999999999999999999878899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceecccC
Q 017434 325 AGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHWD 363 (371)
Q Consensus 325 ~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~~~ 363 (371)
+++.++++.+++||+.+|.++|+.+++|++++.+...+.
T Consensus 320 ~~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~g~ 358 (380)
T 1p4c_A 320 TGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGV 358 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEEC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEeccc
Confidence 999999999999999999999999999999998876543
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=7.2e-69 Score=547.46 Aligned_cols=352 Identities=40% Similarity=0.665 Sum_probs=317.9
Q ss_pred ccCCChHHHHHHHHhhCCcchhhhhcCCccchhhHHHhHhccccceeeccccCCCCCCccceeecCcccCcceeeccccc
Q 017434 5 SEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAF 84 (371)
Q Consensus 5 ~~~~~~~d~~~~A~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~ 84 (371)
.+++|++|||+.||++||+.+|+|++||+++|.|+++|+++|++|+|+||+|++++++||+|+|+|+++++||++|||++
T Consensus 120 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~ 199 (511)
T 1kbi_A 120 DNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATAL 199 (511)
T ss_dssp GGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred cccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-hHhHHHHHHHHH--cCCcEEecCCCCCCHHHHhccC---CCceEEEEeecCChHHHHHHHHHHHHcCCcEEEE
Q 017434 85 QKMAHP-EGECATARAASA--AGTIMTLSSWATSSVEEVSSTG---PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (371)
Q Consensus 85 ~~~~~~-~~e~~~a~aa~~--~G~~~~~s~~~~~~~eei~~~~---~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~v 158 (371)
+++.|| ++|++++++|++ +|+++++|++++.++|++.+.. .++.|||||++.|++.+.+++++++++|+++|+|
T Consensus 200 ~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~i 279 (511)
T 1kbi_A 200 CKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFV 279 (511)
T ss_dssp GGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEE
T ss_pred ccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999 999999999999 9999999999999999998765 2789999999999999999999999999999999
Q ss_pred ecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccC
Q 017434 159 TVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT 238 (371)
Q Consensus 159 tvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~ 238 (371)
|+|||+.|+|+++++++|.+|... .....+ . ......+...++....++.++|++|+++|+.+++||++|++.+
T Consensus 280 tvd~p~~g~R~~~~r~g~~~p~~~-~~~~~g---~--~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~ 353 (511)
T 1kbi_A 280 TVDAPSLGQREKDMKLKFSNTKAG-PKAMKK---T--NVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR 353 (511)
T ss_dssp ECSCSSCCCCHHHHHHHHTTCC--------C---C--CCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECS
T ss_pred eCCCCCccccHHHHhccCCCCccc-cccccc---c--cccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCC
Confidence 999999999999999999877421 110000 0 0011122233444446788999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc-----CCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK-----GRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~-----~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
+++|+.+.++|+|+|+|+||||++++.++++++.++++++++. +++|||++|||+++.|++|+|++|||+|+|||
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 9999999999999999999999999999999999999999883 47999999999999999999999999999999
Q ss_pred hHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeccc
Q 017434 314 PVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHW 362 (371)
Q Consensus 314 ~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~~ 362 (371)
||++++++.|++|+.++++.+++||+.+|.++|+.+++||+++.+....
T Consensus 434 ~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~ 482 (511)
T 1kbi_A 434 PFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLST 482 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTT
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhhhhh
Confidence 9999998889999999999999999999999999999999999886543
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=2.1e-43 Score=345.13 Aligned_cols=274 Identities=19% Similarity=0.291 Sum_probs=217.0
Q ss_pred hccccceeecccc--CCCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHH--
Q 017434 44 NAFSRILFRPRIL--RDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEE-- 119 (371)
Q Consensus 44 ~~~~~~~l~pr~l--~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~ee-- 119 (371)
.+||+|+|+|+.| .+++++||+|+|+|+++++||++|||++++..+++.|.++|++|+++|+++++|+++.. +|+
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCcc
Confidence 5899999999999 58899999999999999999999999999988999999999999999999999988642 222
Q ss_pred -----HhccCC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccC
Q 017434 120 -----VSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIG 193 (371)
Q Consensus 120 -----i~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~ 193 (371)
|.+..| .+.+-+|-..... ++..+.++..|++++.++++..
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~------------------------------ 179 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLM------------------------------ 179 (365)
T ss_dssp ------------CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHH------------------------------
T ss_pred ccceEehhhCCCCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEecccc------------------------------
Confidence 222234 4455555432222 3556667788999999998731
Q ss_pred CCCCCCcchhhhHhhhhcccCC-CH-HHHHHHHhhcCCCEEEEEc---cCHHHHHHHHHhCCCEEEEeCCCCcCC-----
Q 017434 194 KMDKTDDSGLASYVANQIDRSL-NW-KDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGARQL----- 263 (371)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~ir~~~~~pv~vK~v---~~~e~a~~a~~~Gad~I~vs~~gg~~~----- 263 (371)
++.+++..++++ .| +.|+++++.+++||++|++ .++++|+.+.++|+|+|+|+||||+++
T Consensus 180 ----------qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~ 249 (365)
T 3sr7_A 180 ----------QELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIEN 249 (365)
T ss_dssp ----------HHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC---------
T ss_pred ----------ccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhc
Confidence 111222245555 56 6799999999999999998 799999999999999999999999864
Q ss_pred ----------CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHH
Q 017434 264 ----------DYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQM 333 (371)
Q Consensus 264 ----------~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~ 333 (371)
+++.|+..+|.++. .+.+++|||++|||+++.|++|+|++|||+|++||+|++++.+.|+++|.++++.
T Consensus 250 ~r~~~~~~~~~~g~pt~~~L~~v~-~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~ 328 (365)
T 3sr7_A 250 RRGGNRSYLNQWGQTTAQVLLNAQ-PLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNG 328 (365)
T ss_dssp -----CGGGTTCSCBHHHHHHHHG-GGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHH-HhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHH
Confidence 67888999998764 3445799999999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHHhCCCCHhhhcccceeccc
Q 017434 334 LRDEFELTMALSGCRSLKEITRNHIVTHW 362 (371)
Q Consensus 334 l~~el~~~m~~~G~~~l~~l~~~~l~~~~ 362 (371)
+++||+.+|.++|+++++||++..++..+
T Consensus 329 l~~eL~~~m~~~G~~si~eL~~~~~~~~~ 357 (365)
T 3sr7_A 329 WKEDLRLIMCALNCQTIAELRNVDYLLYG 357 (365)
T ss_dssp HHHHHHHHHHHTTCSSTGGGGGCCEEECH
T ss_pred HHHHHHHHHHHhCCcCHHHhccCCEEEcc
Confidence 99999999999999999999998877543
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=100.00 E-value=6.9e-44 Score=346.52 Aligned_cols=280 Identities=26% Similarity=0.279 Sum_probs=213.4
Q ss_pred hhhhcCCccchhhHHHhHhccccceeeccccC--CCCCCccceeecCcccCcceeecccccccccCChH---hHHHHHHH
Q 017434 26 YDYYASGAEDQWTLQENRNAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEG---ECATARAA 100 (371)
Q Consensus 26 ~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~--~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~---e~~~a~aa 100 (371)
.+|+....+++.|+++|+.+|++|+|+||+|+ +++++||+|+|+|+++++||++|||++. ++.+ +.+++++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccC---CcchhHHHHHHHHHH
Confidence 48999999999999999999999999999999 8899999999999999999999999864 5544 47999999
Q ss_pred HHcCCcEEecCCCCCCHHHH--------hccCC-CceE-----EEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCc
Q 017434 101 SAAGTIMTLSSWATSSVEEV--------SSTGP-GIRF-----FQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLG 166 (371)
Q Consensus 101 ~~~G~~~~~s~~~~~~~eei--------~~~~~-~~~~-----~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g 166 (371)
+++|+++++|++++. +++. ....+ .|.+ .|++. .+++...+. ++..+++++.++++..
T Consensus 85 ~~~G~~~~~~~~~~~-le~~~~~~~~ql~~~~~d~pv~~~~~~~q~~~-~~~~~~~~a---~~~~~~~a~~i~~n~~--- 156 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERPEALRSFRVRKVAPKALLIANLGLAQLRR-YGRDDLLRL---VEMLEADALAFHVNPL--- 156 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCTTTHHHHCCTTTCSSSCEEEEEEGGGGGT-CCHHHHHHH---HHHHTCSEEEEECCHH---
T ss_pred HHcCCCEEeCCchhc-ccCCCccceEEeeccCCCceeecccChhhhhc-cChHHHHHH---HhhcCCCceeeccchH---
Confidence 999999999998764 5431 11111 2222 23321 233443333 3445778887776421
Q ss_pred chhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC--CHHHHHHHHhhcCCCEEEEEc---cCHHH
Q 017434 167 RREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL--NWKDVKWLQTITSLPILVKGV---LTAED 241 (371)
Q Consensus 167 ~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ir~~~~~pv~vK~v---~~~e~ 241 (371)
.++++ ..++.+ .|+.++++|+ +++||++|++ .++++
T Consensus 157 -------------------------------------~~~~~-~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~ 197 (332)
T 1vcf_A 157 -------------------------------------QEAVQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREA 197 (332)
T ss_dssp -------------------------------------HHHHT-TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHHH
T ss_pred -------------------------------------HHHhc-CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHHH
Confidence 00111 112222 4789999999 9999999987 89999
Q ss_pred HHHHHHhCCCEEEEeCCCC---------cC---------CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 017434 242 ASLAIQYGAAGIIVSNHGA---------RQ---------LDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA 303 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg---------~~---------~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~ 303 (371)
++.+.++|+|+|+|+|||| ++ .++++++++.++++++.++ ++|||++|||+++.|+.|+|+
T Consensus 198 a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~ 276 (332)
T 1vcf_A 198 ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKALA 276 (332)
T ss_dssp HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHH
Confidence 9999999999999999987 54 6788999999999998875 699999999999999999999
Q ss_pred cCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 304 LGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 304 lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
+|||+|++||||++++ +.|++|+.++++.+++||+.+|.++|+++++|++++.
T Consensus 277 ~GAd~V~igr~~l~~~-~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 277 LGADLLAVARPLLRPA-LEGAERVAAWIGDYLEELRTALFAIGARNPKEARGRV 329 (332)
T ss_dssp HTCSEEEECGGGHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCE
T ss_pred hCCChHhhhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999999988 7899999999999999999999999999999999864
No 9
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=100.00 E-value=8.9e-41 Score=326.69 Aligned_cols=275 Identities=25% Similarity=0.355 Sum_probs=224.9
Q ss_pred hHhccccceeeccccC--CCCCCccceeecCcccCcceeeccccccc-ccCChHhHHHHHHHHHcCCcEEecCCCCCCHH
Q 017434 42 NRNAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQK-MAHPEGECATARAASAAGTIMTLSSWATSSVE 118 (371)
Q Consensus 42 n~~~~~~~~l~pr~l~--~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~-~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~e 118 (371)
++.+|++|.|+||+|+ +++++|++|+|+|.++++||++|||++.. ..++++|.+++++|.++|+++++|++++. ++
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~ 99 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LK 99 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TT
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-cc
Confidence 3569999999999998 78999999999999999999999996544 44566789999999999999999998654 32
Q ss_pred H---------HhccCC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCcccccccc
Q 017434 119 E---------VSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYE 188 (371)
Q Consensus 119 e---------i~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~ 188 (371)
+ +....+ .|.+.|+....+.+... +.++.+|++++.++++||.. +..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~---~~~~~~gad~i~i~~~~~~~----------~~~~--------- 157 (349)
T 1p0k_A 100 DPSERLSYEIVRKENPNGLIFANLGSEATAAQAK---EAVEMIGANALQIHLNVIQE----------IVMP--------- 157 (349)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHH---HHHHHTTCSEEEEEECTTTT----------C------------
T ss_pred CcccccceehhhhhCCCceeEEeecCCCCHHHHH---HHHHhcCCCeEEecccchhh----------hcCC---------
Confidence 2 222233 67889997545665443 44567899999999998641 0000
Q ss_pred ccccCCCCCCCcchhhhHhhhhcccCC--CHHHHHHHHhhcCCCEEEEEc---cCHHHHHHHHHhCCCEEEEeCCCC---
Q 017434 189 GLYIGKMDKTDDSGLASYVANQIDRSL--NWKDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGA--- 260 (371)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ir~~~~~pv~vK~v---~~~e~a~~a~~~Gad~I~vs~~gg--- 260 (371)
..++.+ .++.++++++.+++||++|++ .++++++.+.++|+|+|+++||||
T Consensus 158 ---------------------~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~ 216 (349)
T 1p0k_A 158 ---------------------EGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNF 216 (349)
T ss_dssp --------------------------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC------
T ss_pred ---------------------CCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcch
Confidence 013344 357899999999999999987 789999999999999999999988
Q ss_pred ------cC-------CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHH
Q 017434 261 ------RQ-------LDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGV 327 (371)
Q Consensus 261 ------~~-------~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv 327 (371)
++ .++++++++.|.++++.+ +++|||++|||++++|+.|++++|||+|++||++++...+.|++++
T Consensus 217 ~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~ 295 (349)
T 1p0k_A 217 SKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGL 295 (349)
T ss_dssp ---------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHH
T ss_pred hhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHH
Confidence 33 467888999999998876 4799999999999999999999999999999999998877788999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCHhhhcccceecc
Q 017434 328 RKVLQMLRDEFELTMALSGCRSLKEITRNHIVTH 361 (371)
Q Consensus 328 ~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~ 361 (371)
.++++.+.+||+.+|.++|+.+++|++++.+...
T Consensus 296 ~~~~~~~~~~l~~~m~~~G~~~i~el~~~~~~~~ 329 (349)
T 1p0k_A 296 LEEIQLILEELKLIMTVLGARTIADLQKAPLVIK 329 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCBHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHhhCCeecc
Confidence 9999999999999999999999999999988753
No 10
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1.1e-42 Score=345.35 Aligned_cols=314 Identities=18% Similarity=0.222 Sum_probs=236.3
Q ss_pred HhhCCcchhhhhcCCccchhhHHHhHhccccceeecc-ccCCCCCCccceeecCcccCcceeecccccccccCChHhHHH
Q 017434 18 KEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPR-ILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECAT 96 (371)
Q Consensus 18 ~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr-~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~ 96 (371)
..+||+..|+|+++|++++ ++|..+||+|.|+|+ .+++++++|++|+|+|+++++||++|||++ +.++ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~g--~~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSDA--LASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCTT--TCCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCCC--cccH----HH
Confidence 3578999999999999999 469999999999998 889999999999999999999999999984 4454 79
Q ss_pred HHHHHHcCCcEEecC--------CCCCCHHHHhccCC-------CceEEEEeecC-ChHHHHHHHHHHHHcCCcEEEEec
Q 017434 97 ARAASAAGTIMTLSS--------WATSSVEEVSSTGP-------GIRFFQLYVTK-HRNVDAQLVKRAERAGFKAIALTV 160 (371)
Q Consensus 97 a~aa~~~G~~~~~s~--------~~~~~~eei~~~~~-------~~~~~QLy~~~-d~~~~~~~~~~a~~aG~~al~vtv 160 (371)
+++++++|.++++++ .++.++|++++..+ .+.|+|+|... |++...+++++++++|+.+++ .+
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-~v 162 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV-RV 162 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-EE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE-Ee
Confidence 999999999999986 22345667765432 35799998645 999999999999999988764 33
Q ss_pred CCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHH
Q 017434 161 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAE 240 (371)
Q Consensus 161 d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e 240 (371)
. +.+..+..+.+.-. +... + .++... . .+++ ..+...|+.++++++.+++||++|++.+++
T Consensus 163 ~----~~~~~e~a~~~~~a-gad~--i-~i~~~~----~---~~~~----~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e 223 (393)
T 2qr6_A 163 S----PQNVREIAPIVIKA-GADL--L-VIQGTL----I---SAEH----VNTGGEALNLKEFIGSLDVPVIAGGVNDYT 223 (393)
T ss_dssp C----TTTHHHHHHHHHHT-TCSE--E-EEECSS----C---CSSC----CCC-----CHHHHHHHCSSCEEEECCCSHH
T ss_pred C----CccHHHHHHHHHHC-CCCE--E-EEeCCc----c---cccc----CCCcccHHHHHHHHHhcCCCEEECCcCCHH
Confidence 2 23444433332100 0000 0 000000 0 0011 123347888999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEeC--CCCcCCC-CccchHHHHHHHHHH-------hcCC-CcEEEecCCCCHHHHHHHHHcCCCEE
Q 017434 241 DASLAIQYGAAGIIVSN--HGARQLD-YVPATVMALEEVVQA-------AKGR-VPVFLDGGVRRGTDVFKALALGASGV 309 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~--~gg~~~~-~~~~~~~~l~~i~~~-------~~~~-i~via~GGI~~~~dv~kal~lGAd~V 309 (371)
+++.+.++|+|+|+|++ |++++.+ +++++++.|+++++. ++++ +|||++|||+++.|+.|+|++|||+|
T Consensus 224 ~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V 303 (393)
T 2qr6_A 224 TALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAV 303 (393)
T ss_dssp HHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 99999999999999987 5555554 468999999999887 5333 99999999999999999999999999
Q ss_pred EEchhH-----------HHhhhcCCh---HHH--------------HHHH----------HHHHHHHHHHHHHhCCCCHh
Q 017434 310 FVGRPV-----------PFSLAVDGE---AGV--------------RKVL----------QMLRDEFELTMALSGCRSLK 351 (371)
Q Consensus 310 ~iGr~~-----------l~~~~~~G~---~gv--------------~~~l----------~~l~~el~~~m~~~G~~~l~ 351 (371)
++||++ +|++++.|. +|+ .+++ ..|++||+..|.++|+++++
T Consensus 304 ~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~ 383 (393)
T 2qr6_A 304 VLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLK 383 (393)
T ss_dssp EECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHH
T ss_pred EECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999996 555554432 333 2333 35689999999999999999
Q ss_pred hhcccceec
Q 017434 352 EITRNHIVT 360 (371)
Q Consensus 352 ~l~~~~l~~ 360 (371)
||++..+..
T Consensus 384 el~~~~~~~ 392 (393)
T 2qr6_A 384 SFQKVSLHV 392 (393)
T ss_dssp HHTTCCEEE
T ss_pred HHhhccEec
Confidence 999987753
No 11
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=100.00 E-value=7.2e-40 Score=321.11 Aligned_cols=273 Identities=21% Similarity=0.251 Sum_probs=220.8
Q ss_pred hccccceeeccccC--CCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCC----CH
Q 017434 44 NAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATS----SV 117 (371)
Q Consensus 44 ~~~~~~~l~pr~l~--~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~----~~ 117 (371)
..|++|+|+|+.|+ +.+++||+|+|+|++++.||++|||+|++....+.+..+|++|+++|+++++|+++.. .+
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 48999999999998 8899999999999999999999999887755556677899999999999999998421 11
Q ss_pred ----HHHhccCC-CceEEEEee----c-CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccc
Q 017434 118 ----EEVSSTGP-GIRFFQLYV----T-KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY 187 (371)
Q Consensus 118 ----eei~~~~~-~~~~~QLy~----~-~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~ 187 (371)
+-+.+.+| .+.+-++.. . .+.+...+.+ +..+++++.|+++. +
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av---~~~~a~al~Ihln~---------~--------------- 159 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAI---QMIEADAIAVHLNP---------A--------------- 159 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHH---HHTTCSEEEEECCH---------H---------------
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHHHH---HHhcCCCeEEEecc---------h---------------
Confidence 11343445 445545543 2 3444444433 44577888887641 0
Q ss_pred cccccCCCCCCCcchhhhHhhhhcccCC---CHHHHHHHHhhcCCCEEEEEc---cCHHHHHHHHHhCCCEEEEeCCCC-
Q 017434 188 EGLYIGKMDKTDDSGLASYVANQIDRSL---NWKDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGA- 260 (371)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~ir~~~~~pv~vK~v---~~~e~a~~a~~~Gad~I~vs~~gg- 260 (371)
.+.+++.+++++ .++.|+++++.+++||++|++ .++++|+.+.++|+|+|+|+||||
T Consensus 160 ----------------~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt 223 (368)
T 3vkj_A 160 ----------------QEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGT 223 (368)
T ss_dssp ----------------HHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSB
T ss_pred ----------------hhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCC
Confidence 111122234444 367899999999999999987 799999999999999999999999
Q ss_pred --------cC--------------CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 261 --------RQ--------------LDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 261 --------~~--------------~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
++ .+++.|+..+|.++++.++ ++|||++|||+++.|++|+|++|||+|++||||+++
T Consensus 224 ~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~ 302 (368)
T 3vkj_A 224 NWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 (368)
T ss_dssp CHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred cccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 33 2357888899999998874 699999999999999999999999999999999998
Q ss_pred hhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceecc
Q 017434 319 LAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTH 361 (371)
Q Consensus 319 ~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~ 361 (371)
+. .|+++|.++++.+.+||+.+|.++|+++++||++..+...
T Consensus 303 ~~-~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~~l~~~ 344 (368)
T 3vkj_A 303 AI-EGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVIL 344 (368)
T ss_dssp HH-HCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCEEEC
T ss_pred Hh-cChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCCEEec
Confidence 75 6899999999999999999999999999999999887754
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=1.6e-36 Score=295.09 Aligned_cols=265 Identities=17% Similarity=0.182 Sum_probs=190.3
Q ss_pred hHHHhHhccccceeeccc--cCCCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcC-CcEEecCCCC
Q 017434 38 TLQENRNAFSRILFRPRI--LRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAG-TIMTLSSWAT 114 (371)
Q Consensus 38 t~~~n~~~~~~~~l~pr~--l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G-~~~~~s~~~~ 114 (371)
-+-+|..+||+|.|+||+ +++++++|++|+|+|+++++||++|||++.+ +..+++++.+.| +.+...++..
T Consensus 8 ~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------~~~la~a~~~~gg~g~~~~~~~~ 81 (336)
T 1ypf_A 8 HHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII------DERIATYLAENNYFYIMHRFQPE 81 (336)
T ss_dssp ----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC------CHHHHHHHHHTTCCCCCCCSSGG
T ss_pred ccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC------hHHHHHHHHhCCCEEEecCCCCH
Confidence 345799999999999999 5799999999999999999999999998765 456766655544 4433333221
Q ss_pred CCHHHHhcc--CCCceEEEEeecCChHHHHHHHHHHHHcC--CcEEEEecCCCCCcchhHHhhhhcCCCCcccccccccc
Q 017434 115 SSVEEVSST--GPGIRFFQLYVTKHRNVDAQLVKRAERAG--FKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGL 190 (371)
Q Consensus 115 ~~~eei~~~--~~~~~~~QLy~~~d~~~~~~~~~~a~~aG--~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~ 190 (371)
...+.+.+. ..-+..+|+ ..+.+. .+.++.+.++| ++.+.+++.
T Consensus 82 ~~~~~i~~~~~~g~~v~v~~--g~~~~~-~~~a~~~~~~g~~~~~i~i~~~----------------------------- 129 (336)
T 1ypf_A 82 KRISFIRDMQSRGLIASISV--GVKEDE-YEFVQQLAAEHLTPEYITIDIA----------------------------- 129 (336)
T ss_dssp GHHHHHHHHHHTTCCCEEEE--CCSHHH-HHHHHHHHHTTCCCSEEEEECS-----------------------------
T ss_pred HHHHHHHHHHhcCCeEEEeC--CCCHHH-HHHHHHHHhcCCCCCEEEEECC-----------------------------
Confidence 111111111 112344552 222222 23345555556 555544320
Q ss_pred ccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeCCCCcCCC-----
Q 017434 191 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSNHGARQLD----- 264 (371)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~~gg~~~~----- 264 (371)
..++...|+.|+++++.++.|+++|+ +.++++|+.+.++|+|+|+++||||++.+
T Consensus 130 -------------------~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~ 190 (336)
T 1ypf_A 130 -------------------HGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKT 190 (336)
T ss_dssp -------------------SCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHH
T ss_pred -------------------CCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeeccccc
Confidence 01233468999999999977777788 89999999999999999999999998654
Q ss_pred -Cccc--hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH--------------------Hhhhc
Q 017434 265 -YVPA--TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP--------------------FSLAV 321 (371)
Q Consensus 265 -~~~~--~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l--------------------~~~~~ 321 (371)
++.+ ++..++++++++ ++|||++|||+++.|++|+|++|||+|++||+++ |++++
T Consensus 191 ~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~ 268 (336)
T 1ypf_A 191 GFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSAS 268 (336)
T ss_dssp SCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC---------------
T ss_pred CcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccc
Confidence 3344 788999999887 7999999999999999999999999999999999 88887
Q ss_pred CChHHHH-----------------HHHHHHHHHHHHHHHHhCCCCHhhhcccceecc
Q 017434 322 DGEAGVR-----------------KVLQMLRDEFELTMALSGCRSLKEITRNHIVTH 361 (371)
Q Consensus 322 ~G~~gv~-----------------~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~~~ 361 (371)
.|++|+. ++++.+++||+..|.++|+++++||++..+...
T Consensus 269 ~~~~g~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~~ 325 (336)
T 1ypf_A 269 EFQKGEKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRTVDYVVV 325 (336)
T ss_dssp --------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGCCEEEC
T ss_pred hhhccCccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCcCCEEEE
Confidence 7777665 899999999999999999999999998877654
No 13
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=2.6e-35 Score=287.64 Aligned_cols=262 Identities=20% Similarity=0.183 Sum_probs=202.7
Q ss_pred hHHHhHhccccceeeccccC-CC-CCCccceeec-----CcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEec
Q 017434 38 TLQENRNAFSRILFRPRILR-DV-SKIDMTTTVL-----GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS 110 (371)
Q Consensus 38 t~~~n~~~~~~~~l~pr~l~-~~-~~~d~s~~i~-----G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s 110 (371)
-+++|..+||+|.|+|+.+. ++ +++||+|+|+ ++.++.||++|||++.+ +..+|++++++|...+++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~------~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVG------TFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTS------CHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCCC------cHHHHHHHHHCCCEEEEc
Confidence 35678999999999999986 78 7999999998 99999999999998643 679999999999888886
Q ss_pred CCCCCCHHHHhcc---CC---CceEEEEeecCChHHHHHHHHHHHHc--CCcEEEEecCCCCCcchhHHhhhhcCCCCcc
Q 017434 111 SWATSSVEEVSST---GP---GIRFFQLYVTKHRNVDAQLVKRAERA--GFKAIALTVDTPRLGRREADIKNRFVLPPHL 182 (371)
Q Consensus 111 ~~~~~~~eei~~~---~~---~~~~~QLy~~~d~~~~~~~~~~a~~a--G~~al~vtvd~p~~g~r~~d~~~~~~~p~~~ 182 (371)
. +.+++++.+. .| .+....+ ..+.+.. +.++.+.+. |++++.++...
T Consensus 88 ~--~~s~e~~~~~i~~~p~~l~~v~~~~--g~~~~~~-~~~~~l~~~~~g~~~i~i~~~~-------------------- 142 (351)
T 2c6q_A 88 K--HYSLVQWQEFAGQNPDCLEHLAASS--GTGSSDF-EQLEQILEAIPQVKYICLDVAN-------------------- 142 (351)
T ss_dssp T--TCCHHHHHHHHHHCGGGCTTEEEEE--CSSHHHH-HHHHHHHHHCTTCCEEEEECSC--------------------
T ss_pred C--CCCHHHHHHHHhhCchhhheeEeec--CCChHHH-HHHHHHHhccCCCCEEEEEecC--------------------
Confidence 4 5677766443 22 1122222 2233332 334444444 77776654310
Q ss_pred ccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc
Q 017434 183 TLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR 261 (371)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~ 261 (371)
.++...|+.|+++|+.+ ++||++|.+.++++|+.+.++|+|+|+|++++|+
T Consensus 143 ----------------------------g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~ 194 (351)
T 2c6q_A 143 ----------------------------GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGS 194 (351)
T ss_dssp ----------------------------TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCST
T ss_pred ----------------------------CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCc
Confidence 01223578999999999 8999999999999999999999999999988763
Q ss_pred -----CC-CCccchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH------------------
Q 017434 262 -----QL-DYVPATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP------------------ 316 (371)
Q Consensus 262 -----~~-~~~~~~~~~l~~i~~~~~~-~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l------------------ 316 (371)
+. .++.+++..|.++.+.++. ++|||++|||+++.|++|+|++|||+|++||+|+
T Consensus 195 ~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k 274 (351)
T 2c6q_A 195 VCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYK 274 (351)
T ss_dssp TBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEE
T ss_pred CcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeee
Confidence 22 2367788888888776532 6999999999999999999999999999999997
Q ss_pred --HhhhcCC--------------hHH----------HHHHHHHHHHHHHHHHHHhCCCCHhhhcccce
Q 017434 317 --FSLAVDG--------------EAG----------VRKVLQMLRDEFELTMALSGCRSLKEITRNHI 358 (371)
Q Consensus 317 --~~~~~~G--------------~~g----------v~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l 358 (371)
|++++.| ++| |.++++.|..||+..|.++|+++++||++...
T Consensus 275 ~~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~ 342 (351)
T 2c6q_A 275 LFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTT 342 (351)
T ss_dssp EEECTTBHHHHHHHSSSCCTTCCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCC
T ss_pred eccccccHhhhhcccccccccccccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCc
Confidence 6666533 367 99999999999999999999999999987643
No 14
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.7e-34 Score=281.05 Aligned_cols=254 Identities=19% Similarity=0.246 Sum_probs=208.9
Q ss_pred hccccceeeccccCCCC--CCcc--ceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHH
Q 017434 44 NAFSRILFRPRILRDVS--KIDM--TTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEE 119 (371)
Q Consensus 44 ~~~~~~~l~pr~l~~~~--~~d~--s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~ee 119 (371)
.+||+|.|+|+.+.+++ ++|+ +|+|+|.+++.||++|||. +.+|..+|++++++|.+++++++ .++|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM~------~vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANMD------TITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCST------TTCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCCC------CchHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 48999999999998877 7664 5599999999999999993 45689999999999999999864 78998
Q ss_pred HhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCC
Q 017434 120 VSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 199 (371)
Q Consensus 120 i~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (371)
+.+......|+|.|...+++...+.++++.++|++.|.+ |++. |
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~i--d~a~-G--------------------------------- 123 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCV--DVAH-A--------------------------------- 123 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEE--ECSC-C---------------------------------
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEE--eCCC-C---------------------------------
Confidence 876655556889888788888889999999999996654 4332 0
Q ss_pred cchhhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCC------CccchHHH
Q 017434 200 DSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLD------YVPATVMA 272 (371)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~------~~~~~~~~ 272 (371)
++...|+.|+++|+.+ ++||++|.+.++++|+.+.++|+|+|+|++|+|++.+ .+.+++..
T Consensus 124 ------------~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~a 191 (361)
T 3r2g_A 124 ------------HAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTC 191 (361)
T ss_dssp ------------SSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHH
T ss_pred ------------CcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHH
Confidence 0112478899999998 7999999999999999999999999999999876532 35567788
Q ss_pred HHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhc-------------------------------
Q 017434 273 LEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV------------------------------- 321 (371)
Q Consensus 273 l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~------------------------------- 321 (371)
+.++++.+ . |||++|||+++.|+.|+|++|||+|++||+|+-...+
T Consensus 192 I~~~~~~~--~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~ 268 (361)
T 3r2g_A 192 IQDCSRAD--R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQ 268 (361)
T ss_dssp HHHHTTSS--S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTC
T ss_pred HHHHHHhC--C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhcc
Confidence 88776654 2 9999999999999999999999999999998632110
Q ss_pred -------CCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 322 -------DGE-------AGVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 322 -------~G~-------~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
+|. ..+.+++..|...|+..|.++|+.+|+||+..
T Consensus 269 ~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 269 MHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp CSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred ccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhC
Confidence 111 13889999999999999999999999999543
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.98 E-value=2.1e-31 Score=265.16 Aligned_cols=305 Identities=18% Similarity=0.248 Sum_probs=186.2
Q ss_pred HhccccceeeccccC-CCCCCccceeec-CcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHH
Q 017434 43 RNAFSRILFRPRILR-DVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV 120 (371)
Q Consensus 43 ~~~~~~~~l~pr~l~-~~~~~d~s~~i~-G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei 120 (371)
..+||+|.|+|+.+. +++++|++|+|+ |++++.||++|||++.+ +..++.++.++|...+++ ++.++|++
T Consensus 9 ~~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~------~~ela~a~a~aGglg~i~--~~~s~e~~ 80 (404)
T 1eep_A 9 ALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVT------ESQMAIAIAKEGGIGIIH--KNMSIEAQ 80 (404)
T ss_dssp CCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHHHTSEEEEC--SSSCHHHH
T ss_pred CCCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCCC------CHHHHHHHHHCCCEEEEC--CCCCHHHH
Confidence 358999999999987 889999999999 99999999999998743 456677788888888876 45678876
Q ss_pred hccCCCceEEE----EeecCChHHHH-HHHHHHHH----cCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccc
Q 017434 121 SSTGPGIRFFQ----LYVTKHRNVDA-QLVKRAER----AGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY 191 (371)
Q Consensus 121 ~~~~~~~~~~Q----Ly~~~d~~~~~-~~~~~a~~----aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~ 191 (371)
.+..+...++| +|...+....+ .++..... .+++.+..+.+.|.. .|+.+-+..+...............
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~i~~~~~~~~~a~ 159 (404)
T 1eep_A 81 RKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNA-CKDLNNKLRVGAAVSIDIDTIERVE 159 (404)
T ss_dssp HHHHHHHHTCC--------------------------------------CCTTC-CBCTTSCBCCEEEECSCTTHHHHHH
T ss_pred HHHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchh-hhhcccCceEEEEeCCChhHHHHHH
Confidence 54332111222 32222211100 01000000 011122222233331 1111000000000000000000000
Q ss_pred cCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CC
Q 017434 192 IGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LD 264 (371)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~ 264 (371)
...+.... .-..-....++.+.|+.++++|+.+ ++||+++.+.++++++.+.++|+|+|+++.++|.. ..
T Consensus 160 --~~~~~G~d-~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~ 236 (404)
T 1eep_A 160 --ELVKAHVD-ILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAG 236 (404)
T ss_dssp --HHHHTTCS-EEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHC
T ss_pred --HHHHCCCC-EEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCC
Confidence 00000000 0000001124456789999999999 89999999999999999999999999996544431 12
Q ss_pred CccchHHHHHHHHHHhc-CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH--------------------Hhhhc--
Q 017434 265 YVPATVMALEEVVQAAK-GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP--------------------FSLAV-- 321 (371)
Q Consensus 265 ~~~~~~~~l~~i~~~~~-~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l--------------------~~~~~-- 321 (371)
.+.+.+..+.++.+.+. .++|||++|||++++|+.|++++|||+|++||+++ ++++.
T Consensus 237 ~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g 316 (404)
T 1eep_A 237 VGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSIS 316 (404)
T ss_dssp CCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC--------
T ss_pred CCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHH
Confidence 35567888888887654 37999999999999999999999999999999995 33322
Q ss_pred -----------------------CChHH-------HHHHHHHHHHHHHHHHHHhCCCCHhhhccccee
Q 017434 322 -----------------------DGEAG-------VRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 359 (371)
Q Consensus 322 -----------------------~G~~g-------v~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~ 359 (371)
+|.++ |.++++.|.+||+..|.++|+++++||++..+.
T Consensus 317 ~~~~g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~ 384 (404)
T 1eep_A 317 AMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKF 384 (404)
T ss_dssp ----------------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCE
T ss_pred HHhhccccchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcE
Confidence 22333 889999999999999999999999999987554
No 16
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.94 E-value=6.4e-25 Score=214.78 Aligned_cols=252 Identities=21% Similarity=0.251 Sum_probs=188.4
Q ss_pred hccccceeeccc-cCCCCCCccceeec-CcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHh
Q 017434 44 NAFSRILFRPRI-LRDVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS 121 (371)
Q Consensus 44 ~~~~~~~l~pr~-l~~~~~~d~s~~i~-G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~ 121 (371)
..||++.|+|+. -.+.+++|++|+|. +..+..||+.|||.+.+ +..+|.+.++.|...++.. +.+.+++.
T Consensus 13 ~~fddv~l~p~~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~--~~s~e~~~ 84 (361)
T 3khj_A 13 LTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQV 84 (361)
T ss_dssp CCGGGEEECCCCBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CCcceEEEECCCCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEec--CCCHHHHH
Confidence 479999999982 13456899999997 68999999999998764 5689998777776666643 34554432
Q ss_pred ----c---cCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCC
Q 017434 122 ----S---TGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGK 194 (371)
Q Consensus 122 ----~---~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~ 194 (371)
+ ....+..+++... + .+.++.+.++|++.|.++. +.
T Consensus 85 ~~I~~vk~~~~~pvga~ig~~-~----~e~a~~l~eaGad~I~ld~--a~------------------------------ 127 (361)
T 3khj_A 85 NEVLKVKNSGGLRVGAAIGVN-E----IERAKLLVEAGVDVIVLDS--AH------------------------------ 127 (361)
T ss_dssp HHHHHHHHTTCCCCEEEECTT-C----HHHHHHHHHTTCSEEEECC--SC------------------------------
T ss_pred HHHHHHHhccCceEEEEeCCC-H----HHHHHHHHHcCcCeEEEeC--CC------------------------------
Confidence 2 2224566777542 2 5667778889999887642 11
Q ss_pred CCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CCCccc
Q 017434 195 MDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPA 268 (371)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~~~~~ 268 (371)
.++....+.++++++.+++|++++.+.++++++.+.++|+|+|+++.++|.. ...+.+
T Consensus 128 ----------------G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p 191 (361)
T 3khj_A 128 ----------------GHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVP 191 (361)
T ss_dssp ----------------CSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCC
T ss_pred ----------------CCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCC
Confidence 0122234678999998899999999999999999999999999996554421 234567
Q ss_pred hHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH--------------------hhhc------
Q 017434 269 TVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAV------ 321 (371)
Q Consensus 269 ~~~~l~~i~~~~~~-~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~--------------------~~~~------ 321 (371)
++..+.++++.... ++|||++|||++++|+.+++++|||+|++|++|+. +++.
T Consensus 192 ~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~ 271 (361)
T 3khj_A 192 QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKS 271 (361)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC-----------
T ss_pred cHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhc
Confidence 88888888665421 69999999999999999999999999999998752 3221
Q ss_pred -------C-C-------hH----------HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 322 -------D-G-------EA----------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 322 -------~-G-------~~----------gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
. + ++ .+.+++..|...|+..|.++|+.+|+||+..
T Consensus 272 ~~~~~y~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 272 GSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp ----------------------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred cchhhhhcccccccccCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 0 1 12 2778999999999999999999999999854
No 17
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.93 E-value=6.4e-25 Score=211.16 Aligned_cols=242 Identities=19% Similarity=0.205 Sum_probs=183.5
Q ss_pred CccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCC---------------------------C
Q 017434 62 IDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWA---------------------------T 114 (371)
Q Consensus 62 ~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~---------------------------~ 114 (371)
+|++++|+|.++++||++||+... . +....+.+.+.|+.++++.+. +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~~----~--~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVLC----S--TEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSSC----S--SHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCCCC----C--CHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 589999999999999999985421 2 345577789999988764221 1
Q ss_pred CCHH----HHhcc---CCCceEEEEeecCChHHHHHHHHHHHHcCCc---EEEEecCCCCCcchhHHhhhhcCCCCcccc
Q 017434 115 SSVE----EVSST---GPGIRFFQLYVTKHRNVDAQLVKRAERAGFK---AIALTVDTPRLGRREADIKNRFVLPPHLTL 184 (371)
Q Consensus 115 ~~~e----ei~~~---~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~---al~vtvd~p~~g~r~~d~~~~~~~p~~~~~ 184 (371)
...+ ++.+. ...|...||.. .+.+...+.+++++++|++ ++.+|+.||.. .+.++
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~g-~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~~~------------- 140 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSISG-LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGKPQ------------- 140 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTCCC-------------
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeCC-CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCchh-------------
Confidence 1122 23322 13678899874 6778888999999999999 99999998864 11000
Q ss_pred ccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEcc--CHHH----HHHHHHhC-CCEEEEeC
Q 017434 185 KNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL--TAED----ASLAIQYG-AAGIIVSN 257 (371)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~--~~e~----a~~a~~~G-ad~I~vs~ 257 (371)
+ . .++...++.++++|+.+++||++|... +.++ ++.+.++| +|+|+++|
T Consensus 141 ---------------------~-g--~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 141 ---------------------V-A--YDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp ---------------------G-G--GSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred ---------------------h-c--CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeC
Confidence 0 0 133345788999999999999999864 4445 78889999 99999998
Q ss_pred CCCc--CCC-----------------Cc----cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchh
Q 017434 258 HGAR--QLD-----------------YV----PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 314 (371)
Q Consensus 258 ~gg~--~~~-----------------~~----~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~ 314 (371)
+.++ ..+ .+ +..++.+.++++.+ +++|||++|||++++|+.+++++|||+|++||+
T Consensus 197 ~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~ 275 (314)
T 2e6f_A 197 SVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTA 275 (314)
T ss_dssp CEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHH
T ss_pred CCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchh
Confidence 6521 000 11 22467888888887 579999999999999999999999999999999
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 315 VPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 315 ~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
+++ +|+ .+++.++++++.+|...|++|++|+++..
T Consensus 276 ~l~----~~p----~~~~~i~~~l~~~~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 276 LQE----EGP----GIFTRLEDELLEIMARKGYRTLEEFRGRV 310 (314)
T ss_dssp HHH----HCT----THHHHHHHHHHHHHHHHTCCSSTTTTTCC
T ss_pred hHh----cCc----HHHHHHHHHHHHHHHHcCCCCHHHHhchH
Confidence 996 244 37788999999999999999999998764
No 18
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.93 E-value=3e-24 Score=206.18 Aligned_cols=241 Identities=18% Similarity=0.205 Sum_probs=182.1
Q ss_pred cceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCC-CC--------------------------
Q 017434 64 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWAT-SS-------------------------- 116 (371)
Q Consensus 64 ~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~-~~-------------------------- 116 (371)
++++++|.++++||++||... + .+....+.+.+.|..++++.+.+ .+
T Consensus 2 l~~~i~g~~l~npv~~Aag~~----~--~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVH----C--MTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSS----C--SSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCC----C--CCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 679999999999999998321 2 25577788999998888754321 10
Q ss_pred HH----HHhc---cC--CCceEEEEeecCChHHHHHHHHHHHHcCCc-EEEEecCCCCCcchhHHhhhhcCCCCcccccc
Q 017434 117 VE----EVSS---TG--PGIRFFQLYVTKHRNVDAQLVKRAERAGFK-AIALTVDTPRLGRREADIKNRFVLPPHLTLKN 186 (371)
Q Consensus 117 ~e----ei~~---~~--~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~-al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~ 186 (371)
.+ ++.+ .. ..|.++|+.. .+.+...+.+++++++|++ ++.+|+.||.. .+.+ .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~g-~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g~~---------------~ 138 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIAG-MSAAENIAMLKKIQESDFSGITELNLSCPNV-PGEP---------------Q 138 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEECC-SSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SSCC---------------C
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcCC-CCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CCcc---------------c
Confidence 22 2221 22 3678889874 6778888999999999999 99999998864 1100 0
Q ss_pred ccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEcc--CHHH----HHHHHHhCCCEEEEeCCCC
Q 017434 187 YEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL--TAED----ASLAIQYGAAGIIVSNHGA 260 (371)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~--~~e~----a~~a~~~Gad~I~vs~~gg 260 (371)
+ . .++...++.++++|+.+++||++|+.. +.++ ++.+.++|+|+|+++|+.+
T Consensus 139 -------------------~-g--~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~ 196 (311)
T 1jub_A 139 -------------------L-A--YDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIG 196 (311)
T ss_dssp -------------------G-G--GCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEE
T ss_pred -------------------c-c--CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Confidence 0 0 133345788999999999999999874 3333 7888899999999998741
Q ss_pred --cCCC--------------C---cc----chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 261 --RQLD--------------Y---VP----ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 261 --~~~~--------------~---~~----~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.+ + ++ ..++.+.++++.+++++|||++|||++++|+.+++++|||+|++||++++
T Consensus 197 ~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 197 NGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp EEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred cCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 1111 0 22 24677888887776589999999999999999999999999999999996
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 318 SLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
+|+ .+++.++++++.+|...|++|++|+++..
T Consensus 277 ----~~p----~~~~~i~~~l~~~l~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 277 ----EGP----AIFDRIIKELEEIMNQKGYQSIADFHGKL 308 (311)
T ss_dssp ----HCT----HHHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred ----cCc----HHHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 244 37788999999999999999999998754
No 19
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.93 E-value=2.8e-24 Score=210.14 Aligned_cols=256 Identities=20% Similarity=0.234 Sum_probs=188.4
Q ss_pred hccccceeeccc-cCCCCCCccceeec-CcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHh
Q 017434 44 NAFSRILFRPRI-LRDVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS 121 (371)
Q Consensus 44 ~~~~~~~l~pr~-l~~~~~~d~s~~i~-G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~ 121 (371)
..||++.|+|.. -.+.+++|++|+|. ...+..||+.|||.+.+ +..+|.+.++.|...++.. +.+.+++.
T Consensus 14 ~~fddv~lvp~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 14 LTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CCGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CCcceEEEECCCCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 379999999973 23556899999997 58899999999998654 5689999898888777753 34555432
Q ss_pred cc----CC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCC
Q 017434 122 ST----GP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMD 196 (371)
Q Consensus 122 ~~----~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (371)
+. .. .++.+.+-..... ...+.++.+.++|++.++++. +.
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~~-~~~~~~~~lieaGvd~I~idt--a~-------------------------------- 130 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAAP-GNEERVKALVEAGVDVLLIDS--SH-------------------------------- 130 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSCT-TCHHHHHHHHHTTCSEEEEEC--SC--------------------------------
T ss_pred HHHHHHHhcCceeEEEEeccCh-hHHHHHHHHHhCCCCEEEEeC--CC--------------------------------
Confidence 21 11 2223333222222 234567778889999887753 10
Q ss_pred CCCcchhhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CCCccch
Q 017434 197 KTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPAT 269 (371)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~~~~~~ 269 (371)
.++....+.|+++++.+ ++|++++.+.++++++.+.++|+|+|+++.++|.. ...+.++
T Consensus 131 --------------G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~ 196 (366)
T 4fo4_A 131 --------------GHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQ 196 (366)
T ss_dssp --------------TTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCH
T ss_pred --------------CCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccch
Confidence 01112346789999988 78999988999999999999999999995333321 1345788
Q ss_pred HHHHHHHHHHhc-CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH--------------------hhhc-----C-
Q 017434 270 VMALEEVVQAAK-GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAV-----D- 322 (371)
Q Consensus 270 ~~~l~~i~~~~~-~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~--------------------~~~~-----~- 322 (371)
+..+.++++.+. .++|||++|||+++.|+.+++++|||+|++|++|+. +++. .
T Consensus 197 ~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~ 276 (366)
T 4fo4_A 197 ITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKG 276 (366)
T ss_dssp HHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC-
T ss_pred HHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcc
Confidence 889998887643 279999999999999999999999999999998852 2220 0
Q ss_pred --------C-------hH----------HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 323 --------G-------EA----------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 323 --------G-------~~----------gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
+ ++ .+.+++..|...|+..|.++|+.+|+||++.
T Consensus 277 ~~~ry~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 277 SSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp --------------CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cccchhccccccccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 0 01 3789999999999999999999999999864
No 20
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.92 E-value=7.3e-24 Score=209.03 Aligned_cols=256 Identities=21% Similarity=0.246 Sum_probs=174.3
Q ss_pred ccccceeeccc-cCCCCCCccceeec-CcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhc
Q 017434 45 AFSRILFRPRI-LRDVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS 122 (371)
Q Consensus 45 ~~~~~~l~pr~-l~~~~~~d~s~~i~-G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~ 122 (371)
.||++.|+|.. -...+++|++|+|- ...+..||+.|||++.+ +..||.+.+++|...+++. ..++|++++
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs------~~~lA~Ava~aGGlGvi~~--~~~~e~~~~ 82 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQVN 82 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTC------SSHHHHHHHTTTCEEEECS--SSCHHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcC------cHHHHHHHHHCCCEEEeCC--CCCHHHHHH
Confidence 69999999964 34557899999985 57789999999998644 4479999999999999975 556665432
Q ss_pred -------cCC----CceE--EEEeec-CChHHH------------------------------HHHHHHHHHcCCcEEEE
Q 017434 123 -------TGP----GIRF--FQLYVT-KHRNVD------------------------------AQLVKRAERAGFKAIAL 158 (371)
Q Consensus 123 -------~~~----~~~~--~QLy~~-~d~~~~------------------------------~~~~~~a~~aG~~al~v 158 (371)
... .|+. .+|++. .+.+.. .+.++.+.++|++.+++
T Consensus 83 ~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIvl 162 (400)
T 3ffs_A 83 EVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVL 162 (400)
T ss_dssp HHHHHHCCC-------------------------------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEEE
Confidence 111 1221 333310 000000 11222222222222222
Q ss_pred ecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccC
Q 017434 159 TVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT 238 (371)
Q Consensus 159 tvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~ 238 (371)
+. ...++....+.|+++++.+++||+++.+.+
T Consensus 163 dt------------------------------------------------a~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t 194 (400)
T 3ffs_A 163 DS------------------------------------------------AHGHSLNIIRTLKEIKSKMNIDVIVGNVVT 194 (400)
T ss_dssp CC------------------------------------------------SCCSBHHHHHHHHHHHTTCCCEEEEEEECS
T ss_pred eC------------------------------------------------CCCCcccHHHHHHHHHhcCCCeEEEeecCC
Confidence 10 001222235779999998899999999999
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCc-----C-CCCccchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHcCCCEEEE
Q 017434 239 AEDASLAIQYGAAGIIVSNHGAR-----Q-LDYVPATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKALALGASGVFV 311 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~-----~-~~~~~~~~~~l~~i~~~~~~-~i~via~GGI~~~~dv~kal~lGAd~V~i 311 (371)
.++++.+.++|+|+|++++.+|. . ...+.+++..+.++++.+.. ++|||++|||+++.|+.+++++||++|++
T Consensus 195 ~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~v 274 (400)
T 3ffs_A 195 EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274 (400)
T ss_dssp HHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 99999999999999999543331 1 12356789999999887642 79999999999999999999999999999
Q ss_pred chhHH--------------------HhhhcC--------------C-------hHH----------HHHHHHHHHHHHHH
Q 017434 312 GRPVP--------------------FSLAVD--------------G-------EAG----------VRKVLQMLRDEFEL 340 (371)
Q Consensus 312 Gr~~l--------------------~~~~~~--------------G-------~~g----------v~~~l~~l~~el~~ 340 (371)
|++|+ |+++.. + ++| +.+++..|...|+.
T Consensus 275 Gt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~ 354 (400)
T 3ffs_A 275 GSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRS 354 (400)
T ss_dssp CGGGTTBTTSSCCEEESSSSEEEC-----------------------------------CEECCBCHHHHHHHHHHHHHH
T ss_pred ChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhccccchhhcccccccccCCCCcEEecCCCCCHHHHHHHHHHHHHH
Confidence 99885 333210 0 122 77899999999999
Q ss_pred HHHHhCCCCHhhhccc
Q 017434 341 TMALSGCRSLKEITRN 356 (371)
Q Consensus 341 ~m~~~G~~~l~~l~~~ 356 (371)
.|.++|+.+|+||+..
T Consensus 355 ~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 355 CMGYLGSASIEELWKK 370 (400)
T ss_dssp HHHHTTCSSHHHHHHH
T ss_pred hhhhcCcccHHHHHhC
Confidence 9999999999999854
No 21
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=3.4e-24 Score=235.51 Aligned_cols=251 Identities=20% Similarity=0.252 Sum_probs=192.9
Q ss_pred cCCCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEec-CCC-------CC------------
Q 017434 56 LRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWA-------TS------------ 115 (371)
Q Consensus 56 l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s-~~~-------~~------------ 115 (371)
...+.++|++++++|.++++||++|||++.. +.++++.+.+.|..+++. +.. +.
T Consensus 525 ~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~~------~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~ 598 (1025)
T 1gte_A 525 YTPVDLVDISVEMAGLKFINPFGLASAAPTT------SSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGP 598 (1025)
T ss_dssp CCGGGGCCCCEEETTEEESSSEEECSSGGGS------SHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCS
T ss_pred ccccccccceeeeccccccCcccccCCCCCC------CHHHHHHHHHCCcCeEEeceecccccccCCCCccEEecccccc
Confidence 3466889999999999999999999997653 567888899989888761 111 00
Q ss_pred ------------------C-------HHHHhccCC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchh
Q 017434 116 ------------------S-------VEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRRE 169 (371)
Q Consensus 116 ------------------~-------~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~ 169 (371)
. ++++.+..+ .+.++|++...+.+...+++++++++|+++|.+|++||.. .+.
T Consensus 599 ~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~ 677 (1025)
T 1gte_A 599 MYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGE 677 (1025)
T ss_dssp CCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-
T ss_pred ccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCC
Confidence 1 123344344 6889999877889999999999999999999999999863 111
Q ss_pred HHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCH----HHHHHH
Q 017434 170 ADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTA----EDASLA 245 (371)
Q Consensus 170 ~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~----e~a~~a 245 (371)
++ + +..+. .++.+.++.++++++.+++||++|+..+. +.++.+
T Consensus 678 ~~----~---------------------------G~~~~--~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~ 724 (1025)
T 1gte_A 678 RG----M---------------------------GLACG--QDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAA 724 (1025)
T ss_dssp -----------------------------------SBGG--GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHH
T ss_pred CC----c---------------------------ccccc--cCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHH
Confidence 10 0 00111 24566789999999999999999997543 458899
Q ss_pred HHhCCCEEEEeCC--------------------CCcCC--CCccch----HHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 017434 246 IQYGAAGIIVSNH--------------------GARQL--DYVPAT----VMALEEVVQAAKGRVPVFLDGGVRRGTDVF 299 (371)
Q Consensus 246 ~~~Gad~I~vs~~--------------------gg~~~--~~~~~~----~~~l~~i~~~~~~~i~via~GGI~~~~dv~ 299 (371)
.++|+|+|+++|+ |++.. ..+++. ++.+.++++.+ +++|||++|||++++|+.
T Consensus 725 ~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s~~da~ 803 (1025)
T 1gte_A 725 KEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGGIDSAESGL 803 (1025)
T ss_dssp HHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCCSHHHHH
T ss_pred HHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecCcCCHHHHH
Confidence 9999999999873 22211 113332 46788888887 369999999999999999
Q ss_pred HHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcc
Q 017434 300 KALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITR 355 (371)
Q Consensus 300 kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~ 355 (371)
++|++|||+|++||++++. +. .+++.+.+||+.+|...|+.++++++.
T Consensus 804 ~~l~~Ga~~v~vg~~~l~~----~~----~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 804 QFLHSGASVLQVCSAVQNQ----DF----TVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp HHHHTTCSEEEESHHHHTS----CT----THHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred HHHHcCCCEEEEeeccccC----Cc----cHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 9999999999999999961 33 467889999999999999999999986
No 22
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.92 E-value=4.6e-25 Score=212.78 Aligned_cols=244 Identities=19% Similarity=0.164 Sum_probs=183.0
Q ss_pred ccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCC---------HHHHhccCCCceEEEEeecCChHHHH
Q 017434 72 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSS---------VEEVSSTGPGIRFFQLYVTKHRNVDA 142 (371)
Q Consensus 72 ~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~---------~eei~~~~~~~~~~QLy~~~d~~~~~ 142 (371)
++++||++|||++.+ +..+++.+++.|..++++++.+.. ++.+....+.|.++||+ ..+++.+.
T Consensus 2 ~l~nri~~APM~~~t------~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYT------DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTTC------SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCCC------cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 468999999998654 578999999999988888874311 12231112378999999 57899999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHH
Q 017434 143 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 222 (371)
Q Consensus 143 ~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 222 (371)
+.+++++++ +++|.||++||....|.. +++ ..+. .++.+.++.+++
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~~----~~G---------------------------~~l~--~~~~~~~eiv~~ 120 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVKE----GAG---------------------------GALL--KDLRHFRYIVRE 120 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHHT----TCG---------------------------GGGG--SCHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCCC----Ccc---------------------------cchh--hCHHHHHHHHHH
Confidence 999999999 999999999997532221 110 0111 356678999999
Q ss_pred HHhhcCCCEEEEEcc---C---HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 223 LQTITSLPILVKGVL---T---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 223 ir~~~~~pv~vK~v~---~---~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
+++.+++||++|... . .+.++.+.++|+|+|+|++....+...+++.++.+.++++ ++|||++|||++++
T Consensus 121 v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~ 196 (318)
T 1vhn_A 121 LRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPE 196 (318)
T ss_dssp HHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHH
T ss_pred HHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCCHH
Confidence 999999999999642 1 2679999999999999954322222345566666666654 79999999999999
Q ss_pred HHHHHHH-cCCCEEEEchhHHH-----hhhcC----Ch---HHHHHHHHHHHHHHHHHHHHhCCC-CHhhhcccceec
Q 017434 297 DVFKALA-LGASGVFVGRPVPF-----SLAVD----GE---AGVRKVLQMLRDEFELTMALSGCR-SLKEITRNHIVT 360 (371)
Q Consensus 297 dv~kal~-lGAd~V~iGr~~l~-----~~~~~----G~---~gv~~~l~~l~~el~~~m~~~G~~-~l~~l~~~~l~~ 360 (371)
|+.++++ .|||+||+||+++. ..... |. .++.++++.+.++++..|++.|.. .+.+++++..+.
T Consensus 197 da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 274 (318)
T 1vhn_A 197 DAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGY 274 (318)
T ss_dssp HHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred HHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 9999999 79999999998754 22221 33 578889999999999999999975 788998886653
No 23
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.91 E-value=2.5e-23 Score=202.56 Aligned_cols=251 Identities=17% Similarity=0.128 Sum_probs=181.0
Q ss_pred ccccCCCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCC------------------
Q 017434 53 PRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWA------------------ 113 (371)
Q Consensus 53 pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~------------------ 113 (371)
|+.-..+++.|++++++|.++++||++|+-... .+....+.+..+|..+++ .|..
T Consensus 26 ~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~~------~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~ 99 (354)
T 4ef8_A 26 GGQQMGRGSMSLQVNLLNNTFANPFMNAAGVMC------TTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLG 99 (354)
T ss_dssp --------CCCCCEEETTEEESSSEEECTTSSC------SSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTE
T ss_pred chhhcCCCCCCcceEECCEECCCCCEeccCCCC------CCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchh
Confidence 455456788999999999999999999983221 245678888888877664 2211
Q ss_pred --------CCCHH----HHhcc--C-CCceEEEEeecCChHHHHHHHHHHH---HcCCcEEEEecCCCCCcchhHHhhhh
Q 017434 114 --------TSSVE----EVSST--G-PGIRFFQLYVTKHRNVDAQLVKRAE---RAGFKAIALTVDTPRLGRREADIKNR 175 (371)
Q Consensus 114 --------~~~~e----ei~~~--~-~~~~~~QLy~~~d~~~~~~~~~~a~---~aG~~al~vtvd~p~~g~r~~d~~~~ 175 (371)
+..++ ++.+. . ..|.++||+. .+.+...+.+++++ +.|+++|.||+.||..
T Consensus 100 ~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G-~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~---------- 168 (354)
T 4ef8_A 100 SINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNV---------- 168 (354)
T ss_dssp EEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS----------
T ss_pred hhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEecc-CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC----------
Confidence 01233 23322 1 2688999975 67888888888888 5799999999999863
Q ss_pred cCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccC--HHH----HHHHHHhC
Q 017434 176 FVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT--AED----ASLAIQYG 249 (371)
Q Consensus 176 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~--~e~----a~~a~~~G 249 (371)
| + ... ++ .+++...+.++++++.+++||+||+... .++ ++.+.++|
T Consensus 169 ---~-g--g~~--------------------l~--~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~G 220 (354)
T 4ef8_A 169 ---P-G--KPQ--------------------VA--YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFP 220 (354)
T ss_dssp ---T-T--SCC--------------------GG--GSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCT
T ss_pred ---C-C--chh--------------------hc--cCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCC
Confidence 1 0 000 01 2344567889999999999999999753 322 34455887
Q ss_pred -CCEEEEeCCC----------Cc------CCCC---c----cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC
Q 017434 250 -AAGIIVSNHG----------AR------QLDY---V----PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG 305 (371)
Q Consensus 250 -ad~I~vs~~g----------g~------~~~~---~----~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lG 305 (371)
+|+|+++|+. .+ +..+ | +..++.+.++++.. +++|||++|||++++|+.+++.+|
T Consensus 221 g~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~-~~ipII~~GGI~s~~da~~~l~aG 299 (354)
T 4ef8_A 221 KVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAG 299 (354)
T ss_dssp TEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHHHHHT
T ss_pred CccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC-CCCCEEEECCcCCHHHHHHHHHcC
Confidence 9999987753 11 1111 2 23577888888874 379999999999999999999999
Q ss_pred CCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 306 ASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 306 Ad~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
||+||+||++++. |+. +++.++++|+.+|...|+.+++|+++..
T Consensus 300 Ad~V~vgra~l~~----GP~----~~~~i~~~l~~~m~~~G~~si~el~G~~ 343 (354)
T 4ef8_A 300 ASMVQVGTALQEE----GPS----IFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp EEEEEECHHHHHH----CTT----HHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred CCEEEEhHHHHHh----CHH----HHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9999999999873 553 6788899999999999999999999864
No 24
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.91 E-value=2.7e-23 Score=228.47 Aligned_cols=310 Identities=17% Similarity=0.173 Sum_probs=209.4
Q ss_pred ChHHHHHHHHhhCCcchhhhhcCCccchhhHHHhHhccccceeeccccC--CCCCCccceeecCcccCcceeeccccccc
Q 017434 9 NVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQK 86 (371)
Q Consensus 9 ~~~d~~~~A~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~pr~l~--~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~ 86 (371)
++..+++.|+..- ...|.-+. +.+-.+....|+++.+.+..+. +++++|+++ .+..||+++||+++.
T Consensus 794 ~i~~l~~~~~~g~-~~~~~~~~-----~~~~~~~~~~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Ga 862 (1479)
T 1ea0_A 794 VIHTLQQAVTNDS-YTTFKKYS-----EQVNKRPPMQLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGA 862 (1479)
T ss_dssp HHHHHHHHHHHTC-HHHHHHHH-----HHHHTSCCCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTT
T ss_pred HHHHHHHHHHhCC-HHHHHHHH-----hhhccCCCCchhhhhhccCCCCCCCcccccccc-----cccCCeEecCccccc
Confidence 4667788887762 22332221 0111134457899988887664 345677666 568999999999765
Q ss_pred ccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhcc--C--CCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCC
Q 017434 87 MAHPEGECATARAASAAGTIMTLSSWATSSVEEVSST--G--PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (371)
Q Consensus 87 ~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~--~--~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~ 162 (371)
+ .++.+.++|++|+++|+.+.+++.. .+.++.... . ....+.|+.+ .........+ ..++++.+.+..
T Consensus 863 l-S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~~~~~~~g~~~~~~IrQ~as-g~FGVn~~~l-----~~a~~ieIKigQ 934 (1479)
T 1ea0_A 863 L-SPEAHGTLNVAMNRIGAKSDSGEGG-EDPARFRPDKNGDNWNSAIKQVAS-GRFGVTAEYL-----NQCRELEIKVAQ 934 (1479)
T ss_dssp B-CHHHHHHHHHHHHHTTCEEECCTTC-CCGGGSSBCTTSCBCCCSEEEECS-SCTTCCHHHH-----TSCSEEEEECCC
T ss_pred c-CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHHhhhccccchhhhhhhhhcC-CCCCcChHHc-----cccchHHHHHhc
Confidence 4 5678889999999999988887653 344444221 1 1235678754 2223222222 356777777632
Q ss_pred CCC--------cchhHH-hhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC-CH----HHHHHHHhhc-
Q 017434 163 PRL--------GRREAD-IKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL-NW----KDVKWLQTIT- 227 (371)
Q Consensus 163 p~~--------g~r~~d-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~i~~ir~~~- 227 (371)
-.. +.+..+ +..-...|+++ ..+++..+.++ ++ +.|+++|+.+
T Consensus 935 GAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv----------------------~lisP~~~~d~~s~edl~~~I~~Lk~~~~ 992 (1479)
T 1ea0_A 935 GAKPGEGGQLPGFKVTEMIARLRHSTPGV----------------------MLISPPPHHDIYSIEDLAQLIYDLKQINP 992 (1479)
T ss_dssp TTSTTTCCEECGGGCCHHHHHHHTCCTTC----------------------CEECCSSCTTCSSHHHHHHHHHHHHHHCT
T ss_pred cCCCCcCCCCCHHHHHHHHHHHcCCCCCC----------------------CccCCCCCcCcCCHHHHHHHHHHHHHhCC
Confidence 111 000000 00000011100 11111122232 23 5689999998
Q ss_pred CCCEEEEEcc---CHHHHHHHHHhCCCEEEEeCCC-CcC-------CCCccchHHHHHHHHHHh-----cCCCcEEEecC
Q 017434 228 SLPILVKGVL---TAEDASLAIQYGAAGIIVSNHG-ARQ-------LDYVPATVMALEEVVQAA-----KGRVPVFLDGG 291 (371)
Q Consensus 228 ~~pv~vK~v~---~~e~a~~a~~~Gad~I~vs~~g-g~~-------~~~~~~~~~~l~~i~~~~-----~~~i~via~GG 291 (371)
+.||++|++. ..++|+.+.++|+|+|+|++|+ |+. .+++.|+...|+++.+.+ ++++|||++||
T Consensus 993 ~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGG 1072 (1479)
T 1ea0_A 993 DAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGG 1072 (1479)
T ss_dssp TCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESS
T ss_pred CCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECC
Confidence 8999999985 3678999999999999999984 431 246778889999998876 24799999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhHHHhhhc---------------------------CChHHHHHHHHHHHHHHHHHHHH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPVPFSLAV---------------------------DGEAGVRKVLQMLRDEFELTMAL 344 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~l~~~~~---------------------------~G~~gv~~~l~~l~~el~~~m~~ 344 (371)
|+++.|++|++++||++|++||+++++++| .|+++|.++++.+.+||+.+|..
T Consensus 1073 IrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~ 1152 (1479)
T 1ea0_A 1073 LKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAG 1152 (1479)
T ss_dssp CCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998753 36889999999999999999999
Q ss_pred hCCCCHhhhc-cccee
Q 017434 345 SGCRSLKEIT-RNHIV 359 (371)
Q Consensus 345 ~G~~~l~~l~-~~~l~ 359 (371)
+|+++++||+ +..+.
T Consensus 1153 lG~~si~eL~g~~~ll 1168 (1479)
T 1ea0_A 1153 LGFRSLNEVIGRTDLL 1168 (1479)
T ss_dssp HTCSCSGGGTTCGGGE
T ss_pred hCCCCHHHHhCchhee
Confidence 9999999994 33443
No 25
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.90 E-value=4.9e-22 Score=199.35 Aligned_cols=142 Identities=23% Similarity=0.344 Sum_probs=119.2
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc------CCCCccchHHHHHHHHHHhcC-CCcE
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR------QLDYVPATVMALEEVVQAAKG-RVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~------~~~~~~~~~~~l~~i~~~~~~-~i~v 286 (371)
...+.++++++.+ ++||+...+.+.+.++.++++|||+|.|.-.+|. ....|.|++.++.+++++... .+||
T Consensus 308 ~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpv 387 (556)
T 4af0_A 308 YQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPC 387 (556)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCE
T ss_pred HHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCE
Confidence 3567899999988 7899999999999999999999999999866553 133477899999999887653 6999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchhHH--------------------Hhhhc-------------------------
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGRPVP--------------------FSLAV------------------------- 321 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr~~l--------------------~~~~~------------------------- 321 (371)
|+||||++..|+.|||++|||+||+|+.|- ||++.
T Consensus 388 IADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s 467 (556)
T 4af0_A 388 IADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAA 467 (556)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSS
T ss_pred EecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccc
Confidence 999999999999999999999999999773 22221
Q ss_pred --------------CCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 322 --------------DGE-------AGVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 322 --------------~G~-------~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
+|. -.+.+++..|...|+..|.++|+.+|+||+..
T Consensus 468 ~dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 468 TARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp EEECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred hhhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 010 12889999999999999999999999999875
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.90 E-value=1.2e-22 Score=194.56 Aligned_cols=243 Identities=19% Similarity=0.171 Sum_probs=174.4
Q ss_pred CCCCccceeecCcccCcceeecc-cccccccCChHhHHHHHHHHHcCCcEEe-------------------------cCC
Q 017434 59 VSKIDMTTTVLGFNISMPIMIAP-TAFQKMAHPEGECATARAASAAGTIMTL-------------------------SSW 112 (371)
Q Consensus 59 ~~~~d~s~~i~G~~~~~Pi~iAP-m~~~~~~~~~~e~~~a~aa~~~G~~~~~-------------------------s~~ 112 (371)
.+++|++++|+|+++++||++|| |.+.+ + .+.+.+.+.|..+++ +..
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aag~~~~~------~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~ 74 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPASGCFGFG------E-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAI 74 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECTTSSTTS------T-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECC
T ss_pred CCCCccceEECCEECCCCcEECCCCCCCC------H-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCccccccc
Confidence 36789999999999999999999 54322 1 233444333433332 111
Q ss_pred --CCCCHHHH--------hccC-CCceEEEEeecCChHHHHHHHHHHHH-cCCcEEEEecCCCCCcchhHHhhhhcCCCC
Q 017434 113 --ATSSVEEV--------SSTG-PGIRFFQLYVTKHRNVDAQLVKRAER-AGFKAIALTVDTPRLGRREADIKNRFVLPP 180 (371)
Q Consensus 113 --~~~~~eei--------~~~~-~~~~~~QLy~~~d~~~~~~~~~~a~~-aG~~al~vtvd~p~~g~r~~d~~~~~~~p~ 180 (371)
.+.+.++. .+.. ..|.++||.. .+.+...+.++++++ +|++++.+++.||....+ +.
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g------~~---- 143 (311)
T 1ep3_A 75 GLQNPGLEVIMTEKLPWLNENFPELPIIANVAG-SEEADYVAVCAKIGDAANVKAIELNISCPNVKHG------GQ---- 143 (311)
T ss_dssp CCCBCCHHHHHHTHHHHHHHHCTTSCEEEEECC-SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT------TE----
T ss_pred CCCCcCHHHHHHHHHHHHHhcCCCCcEEEEEcC-CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc------hh----
Confidence 12233322 2213 4689999985 467788888899988 999999999988752100 00
Q ss_pred ccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEcc---C-HHHHHHHHHhCCCEEEEe
Q 017434 181 HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL---T-AEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~---~-~e~a~~a~~~Gad~I~vs 256 (371)
.+ . .++.+..+.++++++.+++||++|... + .+.++.+.++|+|+|+++
T Consensus 144 ------------------------~~-g--~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 144 ------------------------AF-G--TDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp ------------------------EG-G--GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEEC
T ss_pred ------------------------hh-c--CCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEe
Confidence 00 0 134456788999999989999999863 3 345899999999999998
Q ss_pred C-------CCCcCC---------CCccc----hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 257 N-------HGARQL---------DYVPA----TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 257 ~-------~gg~~~---------~~~~~----~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
| |+.+.. ..+++ .++.+.++++.+ ++|||++|||++++|+.+++++|||+|++||+++
T Consensus 197 ~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l 274 (311)
T 1ep3_A 197 NTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANF 274 (311)
T ss_dssp CCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHH
T ss_pred CCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 7 321110 11222 246677777665 7999999999999999999999999999999998
Q ss_pred HhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 317 FSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
. +++ +++.++++++.+|...|+.+++|+++..
T Consensus 275 ~-----~p~----~~~~i~~~l~~~~~~~g~~~~~~~~g~~ 306 (311)
T 1ep3_A 275 A-----DPF----VCPKIIDKLPELMDQYRIESLESLIQEV 306 (311)
T ss_dssp H-----CTT----HHHHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred c-----CcH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 7 343 5678889999999999999999998754
No 27
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.89 E-value=6.5e-22 Score=192.08 Aligned_cols=242 Identities=15% Similarity=0.176 Sum_probs=179.3
Q ss_pred CccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEec-CCCC--------------------------
Q 017434 62 IDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWAT-------------------------- 114 (371)
Q Consensus 62 ~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s-~~~~-------------------------- 114 (371)
.|++++++|.++++||++|+-... .+....+.+..+|..+++. |...
T Consensus 36 ~~L~~~~~Gl~~~NPv~lAaG~~~------~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n 109 (345)
T 3oix_A 36 VSTHTTIGSFDFDNCLMNAAGVYC------MTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPN 109 (345)
T ss_dssp CCCCEEETTEEESCSEEECTTSSC------SSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCB
T ss_pred CCcCeEECCEECCCCCEEcCCCCC------CCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCC
Confidence 689999999999999999972211 1457788888999877653 2211
Q ss_pred CCH----HHHhc----cCCCceEEEEeecCChHHHHHHHHHHHHcCCc-EEEEecCCCCCcchhHHhhhhcCCCCccccc
Q 017434 115 SSV----EEVSS----TGPGIRFFQLYVTKHRNVDAQLVKRAERAGFK-AIALTVDTPRLGRREADIKNRFVLPPHLTLK 185 (371)
Q Consensus 115 ~~~----eei~~----~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~-al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~ 185 (371)
..+ +++.+ ....|.++||.. .+.+...+.+++++++|+. +|.||+.||.. | + ..
T Consensus 110 ~G~~~~~~~l~~~~~~~~~~pvivsI~g-~~~~d~~~~a~~l~~~g~~d~ielNisCPn~-------------~-G--~~ 172 (345)
T 3oix_A 110 LGINYYLDYVTELQKQPDSKNHFLSLVG-MSPEETHTILXMVEASKYQGLVELNLSCPNV-------------P-G--XP 172 (345)
T ss_dssp SCHHHHHHHHHHHHHSTTCCCCEEEECC-SSHHHHHHHHHHHHHSSCCSEEEEECSCCCS-------------T-T--CC
T ss_pred hhHHHHHHHHHHHhhccCCCCEEEEecC-CCHHHHHHHHHHHhccCCCcEEEEecCCCCc-------------C-C--ch
Confidence 112 22332 123688999985 6888888999999999987 99999999863 1 0 00
Q ss_pred cccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccC---HHHHHHHHHhCCCEEEEeCC----
Q 017434 186 NYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT---AEDASLAIQYGAAGIIVSNH---- 258 (371)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~---~e~a~~a~~~Gad~I~vs~~---- 258 (371)
. ++ .+++...+.++++++.+++||+||+... .+.++.+.++|+++|.+.|.
T Consensus 173 ~--------------------l~--~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~ 230 (345)
T 3oix_A 173 Q--------------------IA--YDFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSI 230 (345)
T ss_dssp C--------------------GG--GCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCE
T ss_pred h--------------------hc--CCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeeccc
Confidence 0 01 2344556889999999999999999743 34477788888887764331
Q ss_pred -------CCc-CC--------CCccc----hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 259 -------GAR-QL--------DYVPA----TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 259 -------gg~-~~--------~~~~~----~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
..+ .+ ..|++ .++.+.++++.+++++|||++|||++++|+.+++++|||+|++||++++.
T Consensus 231 g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~ 310 (345)
T 3oix_A 231 GNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQE 310 (345)
T ss_dssp EEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH
T ss_pred ccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhc
Confidence 111 01 12233 36778888888766799999999999999999999999999999997763
Q ss_pred hhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 319 LAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 319 ~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
|+. +++.++++|+.+|...|+++++|+++.
T Consensus 311 ----gP~----~~~~i~~~L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 311 ----GPQ----IFKRITKELXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp ----CTH----HHHHHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred ----ChH----HHHHHHHHHHHHHHHcCCCCHHHHHhH
Confidence 553 678889999999999999999999875
No 28
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.89 E-value=7.3e-22 Score=194.95 Aligned_cols=122 Identities=21% Similarity=0.281 Sum_probs=102.5
Q ss_pred CCC-EEEEEccCH------HHHHHHHHhCCCEEEEeCCCCcCCC--------C---cc----chHHHHHHHHHHhcCCCc
Q 017434 228 SLP-ILVKGVLTA------EDASLAIQYGAAGIIVSNHGARQLD--------Y---VP----ATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 228 ~~p-v~vK~v~~~------e~a~~a~~~Gad~I~vs~~gg~~~~--------~---~~----~~~~~l~~i~~~~~~~i~ 285 (371)
++| |+||+..+. +.|+.+.++|+|+|+++|+...+.+ + |+ .+++.++++++.+++++|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 689 999997532 3478899999999999998654322 2 22 245789999998877899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 286 VFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
||++|||+|++|+.+++++|||+|++||++++. |+. ++..++++|+.+|...|+.+++|+++..
T Consensus 348 IIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~----GP~----~~~~i~~~L~~~l~~~G~~si~e~~G~~ 411 (415)
T 3i65_A 348 IIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GMK----SAVQIKRELNHLLYQRGYYNLKEAIGRK 411 (415)
T ss_dssp EEECSSCCSHHHHHHHHHHTEEEEEESHHHHHH----GGG----HHHHHHHHHHHHHHHTTCSSSTTTTTTT
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----CHH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 999999999999999999999999999999974 553 6778899999999999999999998764
No 29
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.89 E-value=1.8e-21 Score=190.59 Aligned_cols=251 Identities=20% Similarity=0.221 Sum_probs=169.4
Q ss_pred eeccccCCCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCCC---------------
Q 017434 51 FRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWAT--------------- 114 (371)
Q Consensus 51 l~pr~l~~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~~--------------- 114 (371)
+.|+. ...++.+++++++|.++++||++|+ |.. ..+ ...+...++|..+++ .|...
T Consensus 38 ~~~~~-~~~~~~~L~~~~~Gl~~~NPvglAa-G~~----~~~--~~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~ 109 (367)
T 3zwt_A 38 LLPRA-RFQDSDMLEVRVLGHKFRNPVGIAA-GFD----KHG--EAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLP 109 (367)
T ss_dssp CC----CCCCCGGGCEEETTEEESSSEEECT-TSS----TTS--SSHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEG
T ss_pred ccccc-ccCCCCCCcEEECCEEcCCCCEeCC-CcC----CCH--HHHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEec
Confidence 44542 2356788999999999999999996 222 222 234445556776664 22210
Q ss_pred -------------CCH----HHHhcc---------CCCceEEEEeecC----ChHHHHHHHHHHHHcCCcEEEEecCCCC
Q 017434 115 -------------SSV----EEVSST---------GPGIRFFQLYVTK----HRNVDAQLVKRAERAGFKAIALTVDTPR 164 (371)
Q Consensus 115 -------------~~~----eei~~~---------~~~~~~~QLy~~~----d~~~~~~~~~~a~~aG~~al~vtvd~p~ 164 (371)
..+ +++.+. ...|..+||..++ +.+...+.++++.. +++.+.||+.||.
T Consensus 110 ~~~~~iN~~G~~N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn 188 (367)
T 3zwt_A 110 EDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPN 188 (367)
T ss_dssp GGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTT
T ss_pred CccceeeccCCCCccHHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCC
Confidence 112 222221 1247889996542 23333344444432 4799999999986
Q ss_pred CcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhh-------cCCCEEEEEcc
Q 017434 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTI-------TSLPILVKGVL 237 (371)
Q Consensus 165 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~-------~~~pv~vK~v~ 237 (371)
.. + .+ .+ .+++...+.++.+++. +++||+||+..
T Consensus 189 ~~--------------G--~~--------------------~l---~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p 229 (367)
T 3zwt_A 189 TA--------------G--LR--------------------SL---QGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAP 229 (367)
T ss_dssp ST--------------T--GG--------------------GG---GSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECS
T ss_pred CC--------------C--cc--------------------cc---CCHHHHHHHHHHHHHHHhhccccCCceEEEEeCC
Confidence 31 0 00 00 1233334556666543 68999999974
Q ss_pred C--H----HHHHHHHHhCCCEEEEeCCC-CcC---------CCC---ccc----hHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 238 T--A----EDASLAIQYGAAGIIVSNHG-ARQ---------LDY---VPA----TVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 238 ~--~----e~a~~a~~~Gad~I~vs~~g-g~~---------~~~---~~~----~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
. . +.|+.+.++|+|+|+++|+. ++. ..+ |++ +++.+.++++.+++++|||++|||+|
T Consensus 230 ~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s 309 (367)
T 3zwt_A 230 DLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSS 309 (367)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCC
Confidence 3 2 34788999999999999874 221 112 222 46789999999877899999999999
Q ss_pred HHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 295 GTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
++|+.+++++|||+|++||++++. |+. ++..+.++|+.+|...|+++++|+++..
T Consensus 310 ~~da~~~l~~GAd~V~vgra~l~~----gP~----~~~~i~~~l~~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 310 GQDALEKIRAGASLVQLYTALTFW----GPP----VVGKVKRELEALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHHH----CTH----HHHHHHHHHHHHHHHTTCSSHHHHTTGG
T ss_pred HHHHHHHHHcCCCEEEECHHHHhc----CcH----HHHHHHHHHHHHHHHcCCCCHHHhhCcc
Confidence 999999999999999999999873 553 6778899999999999999999998754
No 30
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.89 E-value=7.7e-22 Score=217.35 Aligned_cols=290 Identities=17% Similarity=0.111 Sum_probs=193.3
Q ss_pred hHhccccceeeccccC--CCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHH
Q 017434 42 NRNAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEE 119 (371)
Q Consensus 42 n~~~~~~~~l~pr~l~--~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~ee 119 (371)
..-.|+++.+.+..+. +++++|+.+ .+..||+++||+++. ..++...++|.+|+++|+.+.+++.. .+.+.
T Consensus 838 ~~~~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~Gs-lS~ea~~aLA~Aas~aGg~~~tGeGg-~~pe~ 910 (1520)
T 1ofd_A 838 PVTALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGA-LSREAHETLAIAMNRLGAKSNSGEGG-EDVVR 910 (1520)
T ss_dssp CSCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTT-SCHHHHHHHHHHHHHHTCBCEECTTC-CCGGG
T ss_pred CCcchhhhccccCCCCCCCchhhcccc-----cccCceEecCcCccc-ccHHHHHHHHHHHHHcCCceEeCCCC-CCHHH
Confidence 3446888887776554 345566555 568999999999775 34567889999999999999998753 33333
Q ss_pred Hh-----------ccCC-----------CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcC
Q 017434 120 VS-----------STGP-----------GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFV 177 (371)
Q Consensus 120 i~-----------~~~~-----------~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~ 177 (371)
.. ...| .....|+-. .........+. .++.+.+.+..-.... .+-.
T Consensus 911 ~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Ql~s-g~FGVn~~~l~-----~ad~IeIKi~QGAKpG------~GG~ 978 (1520)
T 1ofd_A 911 YLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIAS-GRFGVTPEYLM-----SGKQLEIKMAQGAKPG------EGGQ 978 (1520)
T ss_dssp GSCCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEEECT-TCTTCCHHHHH-----HCSEEEEECCCTTSTT------SCCE
T ss_pred HHhhhccccccccccccccccccCcchHHHHHHHhcC-CCCccChhhcc-----chHHHHHHHhccCCCC------CCCC
Confidence 32 0001 135677721 11122212222 2566776653211000 0000
Q ss_pred CCC-cccc--ccccccccCCCCCCCcchhhhHhhhhcccCC-C----HHHHHHHHhhc-CCCEEEEEcc---CHHHHHHH
Q 017434 178 LPP-HLTL--KNYEGLYIGKMDKTDDSGLASYVANQIDRSL-N----WKDVKWLQTIT-SLPILVKGVL---TAEDASLA 245 (371)
Q Consensus 178 ~p~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~i~~ir~~~-~~pv~vK~v~---~~e~a~~a 245 (371)
+|. ++.. +.+.... .....+++..++++ + .+.|+++|+.+ +.||++|++. ..++|+.+
T Consensus 979 Lp~~kV~~~iA~~R~~~----------~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a 1048 (1520)
T 1ofd_A 979 LPGKKVSEYIAMLRRSK----------PGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGV 1048 (1520)
T ss_dssp ECGGGCCHHHHHHHTSC----------TTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCC----------CCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHH
Confidence 010 1100 0000000 00011111122333 2 35689999998 8999999985 35789999
Q ss_pred HHhCCCEEEEeCCC-CcC-------CCCccchHHHHHHHHHHh-----cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 246 IQYGAAGIIVSNHG-ARQ-------LDYVPATVMALEEVVQAA-----KGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 246 ~~~Gad~I~vs~~g-g~~-------~~~~~~~~~~l~~i~~~~-----~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.++|+|+|+|++|+ |+. .+++.|+...|+++.+.+ ++++|||++|||+++.|++|++++||++|++|
T Consensus 1049 ~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1049 AKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp HHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECS
T ss_pred HHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEc
Confidence 99999999999995 431 246778888999998876 33799999999999999999999999999999
Q ss_pred hhHHHhhhc---------------------------CChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhc-ccceec
Q 017434 313 RPVPFSLAV---------------------------DGEAGVRKVLQMLRDEFELTMALSGCRSLKEIT-RNHIVT 360 (371)
Q Consensus 313 r~~l~~~~~---------------------------~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~-~~~l~~ 360 (371)
|+++++++| .|+++|.++++.+.+||+.+|..+|+++++||+ +..+..
T Consensus 1129 TafL~algc~~~r~Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dll~ 1204 (1520)
T 1ofd_A 1129 SIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLK 1204 (1520)
T ss_dssp HHHHHHTTCCCCCCGGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGGEE
T ss_pred HHHHHHHHHHHHHhccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceEEe
Confidence 999998754 268899999999999999999999999999995 444443
No 31
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.87 E-value=4.4e-21 Score=186.17 Aligned_cols=237 Identities=16% Similarity=0.148 Sum_probs=145.6
Q ss_pred CCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccCCCceEEEEee------
Q 017434 61 KIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYV------ 134 (371)
Q Consensus 61 ~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~------ 134 (371)
.+|++++++|.++++||++|++ . +++++ +++++++.|+.++++...+ ++.. ...+.|.|||+|.
T Consensus 42 ~~~l~~~i~g~~l~npi~~aag-~----~~~~~--~~~~~a~~G~g~i~~~~~~--~~~~-~g~~~pr~~~~~~d~~~in 111 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAAG-L----DKDGE--CIDALGAMGFGSIEIGTVT--PRPQ-PGNDKPRLFRLVDAEGLIN 111 (336)
T ss_dssp CCCCCEEETTEEESSSEEECTT-S----STTCC--CHHHHHHTTCSEEEEEEEC--SSCB-CCSCSCCEEEETTTTEEEE
T ss_pred CCCCCeEECCEEcCCCcEeCcc-c----CCcHH--HHHHHHHcCccEEEeCCCC--CCCC-CCCCCcceeeccccceeee
Confidence 4899999999999999999963 2 33333 8888999999987643221 1111 1123456677651
Q ss_pred ---cCChHHHHHHHHHHHHcCCc-EEEEecCCCCC---cchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHh
Q 017434 135 ---TKHRNVDAQLVKRAERAGFK-AIALTVDTPRL---GRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYV 207 (371)
Q Consensus 135 ---~~d~~~~~~~~~~a~~aG~~-al~vtvd~p~~---g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (371)
..+. -..++++++++.+.+ .+++++..... .....++...+.. .. ..+..++.+..+. ..++ ....
T Consensus 112 ~~g~~~~-g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~---~~-~g~d~iein~~sP-~~~g-~~~~ 184 (336)
T 1f76_A 112 RMGFNNL-GVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEK---IY-AYAGYIAINISSP-NTPG-LRTL 184 (336)
T ss_dssp CCCCCBC-CHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHH---HG-GGCSEEEEECCCS-SSTT-GGGG
T ss_pred cCCCCCc-CHHHHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHH---Hh-ccCCEEEEEccCC-CCCC-cccc
Confidence 0011 123444555554433 45566532110 0112233222210 00 0011111111110 0011 1111
Q ss_pred hhhcccCCCHHHHHHHHhhc---------CCCEEEEEcc--CHHH----HHHHHHhCCCEEEEeCCC-CcC---------
Q 017434 208 ANQIDRSLNWKDVKWLQTIT---------SLPILVKGVL--TAED----ASLAIQYGAAGIIVSNHG-ARQ--------- 262 (371)
Q Consensus 208 ~~~~~~~~~~~~i~~ir~~~---------~~pv~vK~v~--~~e~----a~~a~~~Gad~I~vs~~g-g~~--------- 262 (371)
.++.+.++.++++|+.+ ++||++|... +.++ ++.+.++|+|+|+++|++ +++
T Consensus 185 ---~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~ 261 (336)
T 1f76_A 185 ---QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCD 261 (336)
T ss_dssp ---GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTT
T ss_pred ---cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccc
Confidence 23556789999999988 8999999864 3333 789999999999999874 222
Q ss_pred CCC---cc----chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 263 LDY---VP----ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 263 ~~~---~~----~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
..+ |+ .+++.+.++++.+++++|||++|||++++|+.+++++|||+|++||++++
T Consensus 262 ~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 262 QTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp CSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred cCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 011 22 24577888888886689999999999999999999999999999999997
No 32
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.87 E-value=1.3e-20 Score=183.85 Aligned_cols=245 Identities=17% Similarity=0.170 Sum_probs=178.7
Q ss_pred cCcceeecccccccccCChHhHHHHHHHHHcCC-cEEecCCCCCC------HHHHhccCC--CceEEEEeecCChHHHHH
Q 017434 73 ISMPIMIAPTAFQKMAHPEGECATARAASAAGT-IMTLSSWATSS------VEEVSSTGP--GIRFFQLYVTKHRNVDAQ 143 (371)
Q Consensus 73 ~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~-~~~~s~~~~~~------~eei~~~~~--~~~~~QLy~~~d~~~~~~ 143 (371)
+++||++|||++.+ |..++..++++|. .++++++.+.. .+++.+..+ .+.++||+. .+++.+.+
T Consensus 2 l~nriv~APM~g~t------d~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g-~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDRT------DRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAG-SDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTTS------SHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEEC-SCHHHHHH
T ss_pred CCCCEEECCCCCCC------HHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCC-CCHHHHHH
Confidence 57899999998643 7788889999986 67777774311 123433332 789999994 78899999
Q ss_pred HHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHH
Q 017434 144 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWL 223 (371)
Q Consensus 144 ~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 223 (371)
.+++++++|++.|.||++||..-.|. .++ +..+. .++.+..+.++.+
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~----d~~---------------------------G~~l~--~~~~~~~eiv~av 121 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQE----GGY---------------------------GACLL--LDLARVREILKAM 121 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHH----TTC---------------------------GGGGG--GCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcC----CCc---------------------------chhHH--hCHHHHHHHHHHH
Confidence 99999999999999999999742221 011 01111 3466778899999
Q ss_pred HhhcCCCEEEEEccC----------HHHHHHHHHhCCCEEEEeCCCCcCCC-------CccchHHHHHHHHHHhcCCCcE
Q 017434 224 QTITSLPILVKGVLT----------AEDASLAIQYGAAGIIVSNHGARQLD-------YVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 224 r~~~~~pv~vK~v~~----------~e~a~~a~~~Gad~I~vs~~gg~~~~-------~~~~~~~~l~~i~~~~~~~i~v 286 (371)
++.+++||++|.... .+.++.+.++|+|+|+|++....+.. ..+..++.+.++++.++ ++||
T Consensus 122 ~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPV 200 (350)
T 3b0p_A 122 GEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTF 200 (350)
T ss_dssp HHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEE
T ss_pred HHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC-CCeE
Confidence 999999999998521 34578899999999999753211111 11246888999988773 6999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchhHHHhh-----h---cCC---hHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcc
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGRPVPFSL-----A---VDG---EAGVRKVLQMLRDEFELTMALSGCRSLKEITR 355 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~-----~---~~G---~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~ 355 (371)
|++|||++++|+.++++ |||+||+||+++..- . ..| .....++++.+.+.++..+. .|. .+.++++
T Consensus 201 ianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~~k 277 (350)
T 3b0p_A 201 VTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVL-KGT-PPWAVLR 277 (350)
T ss_dssp EEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHH-HTC-CHHHHHT
T ss_pred EEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-cCc-cHHHHHH
Confidence 99999999999999998 999999999876421 1 112 22455677888888887777 465 6899999
Q ss_pred cceecc
Q 017434 356 NHIVTH 361 (371)
Q Consensus 356 ~~l~~~ 361 (371)
+..+..
T Consensus 278 h~~~~~ 283 (350)
T 3b0p_A 278 HMLNLF 283 (350)
T ss_dssp TSTTTT
T ss_pred HHHHHH
Confidence 877653
No 33
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.87 E-value=8.9e-21 Score=189.44 Aligned_cols=123 Identities=22% Similarity=0.305 Sum_probs=102.0
Q ss_pred cCCC-EEEEEccC--HHH----HHHHHHhCCCEEEEeCCCCcCCC--------C---ccc----hHHHHHHHHHHhcCCC
Q 017434 227 TSLP-ILVKGVLT--AED----ASLAIQYGAAGIIVSNHGARQLD--------Y---VPA----TVMALEEVVQAAKGRV 284 (371)
Q Consensus 227 ~~~p-v~vK~v~~--~e~----a~~a~~~Gad~I~vs~~gg~~~~--------~---~~~----~~~~l~~i~~~~~~~i 284 (371)
.++| |++|+..+ .++ |+.+.++|+|+|+++|+...+.+ + |++ +++.+.++++.+++++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 4789 99999743 334 88899999999999998654322 1 221 4577889998886689
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 285 PVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 285 ~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
|||++|||++++|+.+++++|||+|++||++++. |+ .++..+++++..+|...|+.+++|+++..
T Consensus 375 PVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~----gP----~l~~~i~~~l~~~l~~~G~~si~e~~G~~ 439 (443)
T 1tv5_A 375 PIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GM----KSAVQIKRELNHLLYQRGYYNLKEAIGRK 439 (443)
T ss_dssp CEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHH----GG----GHHHHHHHHHHHHHHHHTCSSSGGGTTTT
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----Ch----HHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999999999999999999999999973 44 36778899999999999999999999865
No 34
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.87 E-value=8.3e-21 Score=193.68 Aligned_cols=141 Identities=17% Similarity=0.249 Sum_probs=120.0
Q ss_pred CCHHHHHHHHhhc-C-CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc-----C-CCCccchHHHHHHHHHHhcC----
Q 017434 215 LNWKDVKWLQTIT-S-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR-----Q-LDYVPATVMALEEVVQAAKG---- 282 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~-----~-~~~~~~~~~~l~~i~~~~~~---- 282 (371)
..++.++++++.+ + +|++++.+.+.++++.+.++|+|+|.++.+||. . ..++.|++.++.++.++++.
T Consensus 269 ~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~ 348 (503)
T 1me8_A 269 WQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEE 348 (503)
T ss_dssp HHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhh
Confidence 3567899999987 5 899999999999999999999999999665542 2 23578899999999877532
Q ss_pred ---CCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH--------------------HhhhcCCh---------------
Q 017434 283 ---RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP--------------------FSLAVDGE--------------- 324 (371)
Q Consensus 283 ---~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l--------------------~~~~~~G~--------------- 324 (371)
++|||++|||+++.|++|||++|||+|++|++|+ ||+++.|+
T Consensus 349 ~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~ 428 (503)
T 1me8_A 349 TGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLS 428 (503)
T ss_dssp HSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC------------
T ss_pred cCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhcccccccccccee
Confidence 5999999999999999999999999999999995 44433221
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHhCCCCHhhhcc
Q 017434 325 ------------AGVRKVLQMLRDEFELTMALSGCRSLKEITR 355 (371)
Q Consensus 325 ------------~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~ 355 (371)
.+|.++++.|..||+..|.++|+.+++||++
T Consensus 429 ~~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~ 471 (503)
T 1me8_A 429 FEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQS 471 (503)
T ss_dssp --CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred cccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHh
Confidence 3588999999999999999999999999987
No 35
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.87 E-value=2.9e-20 Score=189.77 Aligned_cols=141 Identities=24% Similarity=0.292 Sum_probs=116.3
Q ss_pred CHHHHHHHHhhcC-CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CCCccchHHHHHHHHHHhcC-CCcEE
Q 017434 216 NWKDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAKG-RVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi 287 (371)
.++.++++++.++ +|++++.+.+.++++.+.++|+|+|+++.++|.- ...+.+++..+.++.+.++. ++|||
T Consensus 284 v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 363 (511)
T 3usb_A 284 VIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVI 363 (511)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred hhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEE
Confidence 4578999999984 8999999999999999999999999996655431 23467888999888777643 69999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchhHHHh--------------------hhc----------------------CChH
Q 017434 288 LDGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LAV----------------------DGEA 325 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lGAd~V~iGr~~l~~--------------------~~~----------------------~G~~ 325 (371)
++|||+++.|+.|++++|||+|++||+|+.. +++ +|.+
T Consensus 364 a~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~ 443 (511)
T 3usb_A 364 ADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIE 443 (511)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcE
Confidence 9999999999999999999999999998543 222 1222
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 326 -------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 326 -------gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
++.++++.|..+|+..|.++|+.++++|+..
T Consensus 444 ~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 444 GRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp --CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 2778999999999999999999999999864
No 36
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.86 E-value=4.7e-20 Score=187.40 Aligned_cols=142 Identities=21% Similarity=0.326 Sum_probs=117.0
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CCCccchHHHHHHHHHHhcC-CCcE
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAKG-RVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~v 286 (371)
..++.++++++.+ ++|++++.+.+.++++.+.++|+|+|+++..+|.. ...+.+++..+.+++++++. ++||
T Consensus 256 ~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPV 335 (490)
T 4avf_A 256 GVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPL 335 (490)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCE
T ss_pred hHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcE
Confidence 3468899999998 78999998999999999999999999996544431 23467899999999987743 6999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchhHHH--------------------hhhcC-------C----------------
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAVD-------G---------------- 323 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr~~l~--------------------~~~~~-------G---------------- 323 (371)
|++|||++++|+.|++++|||+||+|++|+. |+++. |
T Consensus 336 Ia~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~ 415 (490)
T 4avf_A 336 IADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKL 415 (490)
T ss_dssp EEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC-------------------------------
T ss_pred EEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhcccccccccc
Confidence 9999999999999999999999999998753 32210 0
Q ss_pred -hH----------HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 324 -EA----------GVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 324 -~~----------gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
++ .+.+++..|..+|+..|.++|+.+++||+..
T Consensus 416 ~~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 416 VPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp --------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred cCCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 12 3568999999999999999999999999874
No 37
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.85 E-value=7e-20 Score=186.28 Aligned_cols=141 Identities=23% Similarity=0.327 Sum_probs=117.6
Q ss_pred CHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CCCccchHHHHHHHHHHhcC-CCcEE
Q 017434 216 NWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAKG-RVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi 287 (371)
.++.++++++.+ ++||+++.+.+.++++.+.++|+|+|++++++|.. ...+.+.+..+.++.++++. ++|||
T Consensus 259 ~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVI 338 (496)
T 4fxs_A 259 VLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVI 338 (496)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred HHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEE
Confidence 457899999998 79999999999999999999999999997544331 12457889999999887642 69999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchhHHH--------------------hhhc------------------------CC
Q 017434 288 LDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAV------------------------DG 323 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lGAd~V~iGr~~l~--------------------~~~~------------------------~G 323 (371)
++|||++++|+.|++++|||+||+||+|+. |+++ +|
T Consensus 339 a~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg 418 (496)
T 4fxs_A 339 ADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEG 418 (496)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSB
T ss_pred EeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCc
Confidence 999999999999999999999999998853 2221 01
Q ss_pred h-------HHHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 324 E-------AGVRKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 324 ~-------~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
. ..+.+++..|..+|+..|.++|+.+|+||+..
T Consensus 419 ~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 419 IEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 0 24779999999999999999999999999854
No 38
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.84 E-value=3.1e-19 Score=181.69 Aligned_cols=143 Identities=27% Similarity=0.394 Sum_probs=119.8
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc-----CC-CCccchHHHHHHHHHHhcC-CCcE
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR-----QL-DYVPATVMALEEVVQAAKG-RVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~-----~~-~~~~~~~~~l~~i~~~~~~-~i~v 286 (371)
..|+.++++++.+ ++||+++.+.+.++++.+.++|+|+|++++++|. .. ..+.++...+.++.+.++. ++||
T Consensus 264 ~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipv 343 (494)
T 1vrd_A 264 RVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPI 343 (494)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCE
Confidence 4688999999999 7999999999999999999999999999988763 11 2356788888888877543 7999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchhHHH--------------------hhhc-----CC--------------hHH-
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAV-----DG--------------EAG- 326 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr~~l~--------------------~~~~-----~G--------------~~g- 326 (371)
|++|||+++.|+.|++++|||+|++||+|+. ++++ .| ++|
T Consensus 344 ia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~ 423 (494)
T 1vrd_A 344 IADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGI 423 (494)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------C
T ss_pred EEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcc
Confidence 9999999999999999999999999999962 3321 01 234
Q ss_pred ---------HHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 327 ---------VRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 327 ---------v~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
+.++++.+.++|+..|.++|+.++.+|++..
T Consensus 424 ~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~ 463 (494)
T 1vrd_A 424 EGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEKA 463 (494)
T ss_dssp BCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHC
T ss_pred eEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhhC
Confidence 7799999999999999999999999999653
No 39
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.84 E-value=2.1e-19 Score=175.64 Aligned_cols=246 Identities=16% Similarity=0.121 Sum_probs=155.2
Q ss_pred CCCCCccceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCCC----------------------
Q 017434 58 DVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWAT---------------------- 114 (371)
Q Consensus 58 ~~~~~d~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~~---------------------- 114 (371)
...+.|++|+++|+++++||++|+-.. +. +....+++.+.|..+++ .|...
T Consensus 31 g~~~~~L~v~~~Gl~f~NPvglAaG~~----~~--~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~ 104 (354)
T 3tjx_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVM----CT--TTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSM 104 (354)
T ss_dssp --CCCCCCEEETTEEESSSEEECTTSS----CS--SHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECC
T ss_pred CCCCCceeEEECCEEcCCCcEEccCCC----CC--CHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEccccccccc
Confidence 345789999999999999999997212 22 55677888888877654 22211
Q ss_pred ----CCHH----HHhccC---CCceEEEEeecCChHHHHHHHHHHHH---cCCcEEEEecCCCCCcchhHHhhhhcCCCC
Q 017434 115 ----SSVE----EVSSTG---PGIRFFQLYVTKHRNVDAQLVKRAER---AGFKAIALTVDTPRLGRREADIKNRFVLPP 180 (371)
Q Consensus 115 ----~~~e----ei~~~~---~~~~~~QLy~~~d~~~~~~~~~~a~~---aG~~al~vtvd~p~~g~r~~d~~~~~~~p~ 180 (371)
..++ ++.+.. ..|..+++.. .+.+...+..+++.+ .+++.+.||+.||.. |.
T Consensus 105 G~~n~G~~~~~~~~~~~~~~~~~pvivsi~g-~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~-------------~g 170 (354)
T 3tjx_A 105 GLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------------PG 170 (354)
T ss_dssp CCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECC-------------------
T ss_pred ccCCHHHHHHHHHHHHhhccCCceEEEEEec-CChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC-------------cc
Confidence 1122 122111 1456677654 344444344444333 366777788777642 00
Q ss_pred ccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCH------HHHHHHHHh-CCCEE
Q 017434 181 HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTA------EDASLAIQY-GAAGI 253 (371)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~------e~a~~a~~~-Gad~I 253 (371)
.+. + ..+++...+.++++++.++.|+.+|..... ..+..+.+. +++.+
T Consensus 171 ---~~~--------------------l--~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i 225 (354)
T 3tjx_A 171 ---KPQ--------------------V--AYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFI 225 (354)
T ss_dssp --------------------------C--TTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEE
T ss_pred ---hhh--------------------h--ccCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchh
Confidence 000 0 012334557789999999999999986432 113333444 34444
Q ss_pred EEeCCCC-------------------cCCCCccchH----HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEE
Q 017434 254 IVSNHGA-------------------RQLDYVPATV----MALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVF 310 (371)
Q Consensus 254 ~vs~~gg-------------------~~~~~~~~~~----~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~ 310 (371)
...|.-. .+..+|++.+ ..+.++.+... ++|||++|||.|++|+++++.+|||+||
T Consensus 226 ~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~-~~pIIg~GGI~s~~Da~e~i~aGAs~Vq 304 (354)
T 3tjx_A 226 TCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCP-GKLIFGCGGVYTGEDAFLHVLAGASMVQ 304 (354)
T ss_dssp EECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHHHTEEEEE
T ss_pred heecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcC-CCcEEEeCCcCCHHHHHHHHHcCCCEEE
Confidence 4433210 0112344433 34555555543 6899999999999999999999999999
Q ss_pred EchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 311 VGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 311 iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
+||+++|. |+. ++..+++||+.+|+..|++|++|+++..
T Consensus 305 v~Ta~~y~----GP~----~~~~I~~~L~~~L~~~G~~si~e~~G~~ 343 (354)
T 3tjx_A 305 VGTALQEE----GPS----IFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp ECHHHHHH----CTT----HHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred EChhhhhc----Cch----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 99999873 664 6778899999999999999999999864
No 40
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.82 E-value=1.1e-18 Score=177.46 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=120.2
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CCCccchHHHHHHHHHHhc-CCCcE
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPATVMALEEVVQAAK-GRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~-~~i~v 286 (371)
..|+.++++++.+ ++|++.+++.+.++++.+.++|+|+|.+++.+|.. ..++.+++..+.++..... .++||
T Consensus 260 ~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipv 339 (491)
T 1zfj_A 260 GVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTI 339 (491)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCE
Confidence 3578899999999 89999999999999999999999999998765542 1345678888888877543 37999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchhHHH--------------------hhhcCC----------------------h
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAVDG----------------------E 324 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr~~l~--------------------~~~~~G----------------------~ 324 (371)
|++|||+++.|+.|++++||++|++||+|+. +++..+ +
T Consensus 340 ia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~ 419 (491)
T 1zfj_A 340 IADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVP 419 (491)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCC
T ss_pred EeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCc
Confidence 9999999999999999999999999999972 221101 2
Q ss_pred HH----------HHHHHHHHHHHHHHHHHHhCCCCHhhhcccce
Q 017434 325 AG----------VRKVLQMLRDEFELTMALSGCRSLKEITRNHI 358 (371)
Q Consensus 325 ~g----------v~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l 358 (371)
+| +.++++.|..||+..|.++|+.++.+|+....
T Consensus 420 ~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~~ 463 (491)
T 1zfj_A 420 EGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQ 463 (491)
T ss_dssp SBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCC
T ss_pred CcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhcCc
Confidence 33 89999999999999999999999999986543
No 41
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.79 E-value=2.1e-18 Score=175.20 Aligned_cols=138 Identities=23% Similarity=0.315 Sum_probs=110.6
Q ss_pred HHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC-------CCCccchHHHHHHHHHHhcC-CCcEEE
Q 017434 217 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ-------LDYVPATVMALEEVVQAAKG-RVPVFL 288 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~-------~~~~~~~~~~l~~i~~~~~~-~i~via 288 (371)
++.++++++.+++|+++|++.++++++.+. |+|+|.+ +.|+.. ..+|.++..++.++.+.... ++|||+
T Consensus 257 L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia 333 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNIANPKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIA 333 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhCCccccCCcCCHHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEe
Confidence 466899999999999999999999998887 9999999 433322 23456666666655544321 699999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchhHHH--------------------hhhcCC----------------------hHH
Q 017434 289 DGGVRRGTDVFKALALGASGVFVGRPVPF--------------------SLAVDG----------------------EAG 326 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~iGr~~l~--------------------~~~~~G----------------------~~g 326 (371)
+|||+++.|++|+|++|||+|++|++|+. ++++.| ++|
T Consensus 334 ~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g 413 (486)
T 2cu0_A 334 DGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEG 413 (486)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCB
T ss_pred cCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccc
Confidence 99999999999999999999999999983 222111 233
Q ss_pred ----------HHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 017434 327 ----------VRKVLQMLRDEFELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 327 ----------v~~~l~~l~~el~~~m~~~G~~~l~~l~~~~ 357 (371)
+..+++.|..+|+..|.++|+.++.+|+...
T Consensus 414 ~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~~ 454 (486)
T 2cu0_A 414 VEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKG 454 (486)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHC
T ss_pred eEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhhC
Confidence 8899999999999999999999999998653
No 42
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.79 E-value=1.9e-18 Score=176.78 Aligned_cols=140 Identities=26% Similarity=0.317 Sum_probs=111.5
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC------CCCccc---hHHHHHHHHHHhcCCC
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ------LDYVPA---TVMALEEVVQAAKGRV 284 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~------~~~~~~---~~~~l~~i~~~~~~~i 284 (371)
+.++.++++++.+ ++||++|.+.+.++|+.+.++|+|+|++++|+|.. .+.+.+ .+..++++++.+ ++
T Consensus 282 ~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~i 359 (514)
T 1jcn_A 282 YQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GV 359 (514)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TC
T ss_pred hHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CC
Confidence 3578899999999 89999999999999999999999999997764421 123433 344555555544 79
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh--------------------hhc---------------------CC
Q 017434 285 PVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS--------------------LAV---------------------DG 323 (371)
Q Consensus 285 ~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~--------------------~~~---------------------~G 323 (371)
|||++|||+++.|+.|++++|||+|++||+|+.. +.. .+
T Consensus 360 pVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~ 439 (514)
T 1jcn_A 360 PIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKI 439 (514)
T ss_dssp CEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC----------------------------------------
T ss_pred CEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhcccccccee
Confidence 9999999999999999999999999999988642 110 02
Q ss_pred hHHH----------HHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 017434 324 EAGV----------RKVLQMLRDEFELTMALSGCRSLKEITRN 356 (371)
Q Consensus 324 ~~gv----------~~~l~~l~~el~~~m~~~G~~~l~~l~~~ 356 (371)
++|+ .++++.|..||+..|.++|+++++||++.
T Consensus 440 ~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 440 AQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 3555 89999999999999999999999999985
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.74 E-value=2.3e-16 Score=152.40 Aligned_cols=198 Identities=19% Similarity=0.229 Sum_probs=143.0
Q ss_pred eeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHH-------HhccCCCceEEEEeecC--
Q 017434 66 TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEE-------VSSTGPGIRFFQLYVTK-- 136 (371)
Q Consensus 66 ~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~ee-------i~~~~~~~~~~QLy~~~-- 136 (371)
++++| ++.||++|||++.+ +..++.++.++|...++......+.++ +.+..+.|+.++++...
T Consensus 9 ~~~l~--~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 9 TETFG--VEHPIMQGGMQWVG------RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQ 80 (328)
T ss_dssp HHHHT--CSSSEEECCCTTTC------SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS
T ss_pred HHHhC--CCCCEEECCCCCCC------cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 34555 46899999997643 457999999999766664332222433 22333457888998741
Q ss_pred -ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 137 -HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 137 -d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
+++ ..+.++.+.+.|++.+.++.++|
T Consensus 81 ~~~~-~~~~~~~~~~~g~d~V~~~~g~p---------------------------------------------------- 107 (328)
T 2gjl_A 81 KPVP-YAEYRAAIIEAGIRVVETAGNDP---------------------------------------------------- 107 (328)
T ss_dssp SCCC-HHHHHHHHHHTTCCEEEEEESCC----------------------------------------------------
T ss_pred cCcc-HHHHHHHHHhcCCCEEEEcCCCc----------------------------------------------------
Confidence 222 45677888889999887654321
Q ss_pred CHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCC--CCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 216 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
++.++++++. ++|++.+ +.+.++++.+.++|+|+|.+++. ||+......++++.++++++.+ ++||+++|||+
T Consensus 108 -~~~~~~l~~~-gi~vi~~-v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~ 182 (328)
T 2gjl_A 108 -GEHIAEFRRH-GVKVIHK-CTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFA 182 (328)
T ss_dssp -HHHHHHHHHT-TCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCC
T ss_pred -HHHHHHHHHc-CCCEEee-CCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCC
Confidence 3456677665 7888854 67899999999999999999763 3332212346888899888766 79999999999
Q ss_pred CHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHH
Q 017434 294 RGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRK 329 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~ 329 (371)
+++|+.+++++|||+|++||+|+....+.+.+.+++
T Consensus 183 ~~~~v~~al~~GAdgV~vGs~~~~~~e~~~~~~~k~ 218 (328)
T 2gjl_A 183 DGRGLVAALALGADAINMGTRFLATRECPIHPAVKA 218 (328)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHTSSSSCSCHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECHHHHcCccccccHHHHH
Confidence 999999999999999999999998665544444433
No 44
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.74 E-value=1.7e-16 Score=153.71 Aligned_cols=185 Identities=19% Similarity=0.218 Sum_probs=137.1
Q ss_pred eecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHH-------HhccCCCceEEEEeecCChH
Q 017434 67 TVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEE-------VSSTGPGIRFFQLYVTKHRN 139 (371)
Q Consensus 67 ~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~ee-------i~~~~~~~~~~QLy~~~d~~ 139 (371)
+++| ++.||+.|||++.+ +..++.++.++|...++... ..+.++ +.+..+.|+.+|++.. +++
T Consensus 7 ~~l~--~~~Pii~apM~g~s------~~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~-~~~ 76 (332)
T 2z6i_A 7 ELLK--IDYPIFQGGMAWVA------DGDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLL-SPF 76 (332)
T ss_dssp HHHT--CSSSEEECCCTTTC------CHHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTT-STT
T ss_pred HHhC--CCCCEEeCCCCCCC------cHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCC-CCC
Confidence 3455 57899999998543 45789999999975454322 223333 2223346888999863 333
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHH
Q 017434 140 VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 219 (371)
Q Consensus 140 ~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (371)
..+.++.+.++|++.+.++.++| .+.
T Consensus 77 -~~~~~~~a~~~g~d~V~~~~g~p-----------------------------------------------------~~~ 102 (332)
T 2z6i_A 77 -VEDIVDLVIEEGVKVVTTGAGNP-----------------------------------------------------SKY 102 (332)
T ss_dssp -HHHHHHHHHHTTCSEEEECSSCG-----------------------------------------------------GGT
T ss_pred -HHHHHHHHHHCCCCEEEECCCCh-----------------------------------------------------HHH
Confidence 45678888899999988765332 122
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCC--CCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTD 297 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~d 297 (371)
++++++ .++|+++|. .+.++++.+.++|+|+|.+++. ||+. +..+++..++++++.+ ++|||++|||.++++
T Consensus 103 i~~l~~-~g~~v~~~v-~~~~~a~~~~~~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~ 176 (332)
T 2z6i_A 103 MERFHE-AGIIVIPVV-PSVALAKRMEKIGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADGEG 176 (332)
T ss_dssp HHHHHH-TTCEEEEEE-SSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHH
T ss_pred HHHHHH-cCCeEEEEe-CCHHHHHHHHHcCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCHHH
Confidence 455655 488999885 6889999999999999999764 4331 2356788899999887 799999999999999
Q ss_pred HHHHHHcCCCEEEEchhHHHhhhc
Q 017434 298 VFKALALGASGVFVGRPVPFSLAV 321 (371)
Q Consensus 298 v~kal~lGAd~V~iGr~~l~~~~~ 321 (371)
+.+++++|||+|++||+|+....+
T Consensus 177 ~~~al~~GAdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 177 AAAGFMLGAEAVQVGTRFVVAKES 200 (332)
T ss_dssp HHHHHHTTCSEEEECHHHHTBTTC
T ss_pred HHHHHHcCCCEEEecHHHhcCccc
Confidence 999999999999999999876543
No 45
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.73 E-value=3.7e-16 Score=150.94 Aligned_cols=190 Identities=20% Similarity=0.248 Sum_probs=138.7
Q ss_pred cccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHH-------hccCCCceEEEEeecCChHHHHH
Q 017434 71 FNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV-------SSTGPGIRFFQLYVTKHRNVDAQ 143 (371)
Q Consensus 71 ~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei-------~~~~~~~~~~QLy~~~d~~~~~~ 143 (371)
..++.||+.|||++.+ +..++.++.++|...++... ..+.+++ .+....|+.+++... +++ ..+
T Consensus 23 l~~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~~-~~~ 93 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAG------TPTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILV-SPW-ADD 93 (326)
T ss_dssp HTCSSSEEECCCTTTS------CHHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETT-STT-HHH
T ss_pred cCCCCCEEECCCCCCC------CHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEecc-CCC-HHH
Confidence 3457899999998643 45799999999976666432 2344332 222335778888752 222 356
Q ss_pred HHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHH
Q 017434 144 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWL 223 (371)
Q Consensus 144 ~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 223 (371)
.++.+.+.|++.+.++.++| .+.++++
T Consensus 94 ~~~~~~~~g~d~V~l~~g~p-----------------------------------------------------~~~~~~l 120 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGNP-----------------------------------------------------TKYIREL 120 (326)
T ss_dssp HHHHHHHTTCSEEEEESSCC-----------------------------------------------------HHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCCc-----------------------------------------------------HHHHHHH
Confidence 77778889999887654322 1334555
Q ss_pred HhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeC--CCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 017434 224 QTITSLPILVKGVLTAEDASLAIQYGAAGIIVSN--HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKA 301 (371)
Q Consensus 224 r~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~--~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~ka 301 (371)
++ .++|+++ .+.+.++++.+.++|+|+|.+++ +||++ +..+++..++++++.+ ++|||++|||++++|+.++
T Consensus 121 ~~-~g~~v~~-~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~a 194 (326)
T 3bo9_A 121 KE-NGTKVIP-VVASDSLARMVERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAA 194 (326)
T ss_dssp HH-TTCEEEE-EESSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHH
T ss_pred HH-cCCcEEE-EcCCHHHHHHHHHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHH
Confidence 55 3777775 45789999999999999999987 35542 2356889999998887 7999999999999999999
Q ss_pred HHcCCCEEEEchhHHHhhhcCChHHHH
Q 017434 302 LALGASGVFVGRPVPFSLAVDGEAGVR 328 (371)
Q Consensus 302 l~lGAd~V~iGr~~l~~~~~~G~~gv~ 328 (371)
+++||++|++||+|+....+.+.++++
T Consensus 195 l~~GA~gV~vGs~~~~~~e~~~~~~~k 221 (326)
T 3bo9_A 195 FALGAEAVQMGTRFVASVESDVHPVYK 221 (326)
T ss_dssp HHHTCSEEEESHHHHTBSSCCSCHHHH
T ss_pred HHhCCCEEEechHHHcCccccccHHHH
Confidence 999999999999999876554444433
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.69 E-value=2.8e-15 Score=147.08 Aligned_cols=206 Identities=21% Similarity=0.217 Sum_probs=129.8
Q ss_pred Ccceeeccccc-ccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHH-------hccCCCceEEEEeecCCh----HHH
Q 017434 74 SMPIMIAPTAF-QKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV-------SSTGPGIRFFQLYVTKHR----NVD 141 (371)
Q Consensus 74 ~~Pi~iAPm~~-~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei-------~~~~~~~~~~QLy~~~d~----~~~ 141 (371)
+.||+.|||++ .+ +..++.++.++|...+++.. ..+.+++ .+..+.|+.+|++...+. +..
T Consensus 10 ~~Pii~apMaggvs------~~~la~av~~aGglG~i~~~-~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~ 82 (369)
T 3bw2_A 10 PLPIVQAPMAGGVS------VPQLAAAVCEAGGLGFLAAG-YKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAV 82 (369)
T ss_dssp SSSEEECCCTTTTS------CHHHHHHHHHTTSBEEEECT-TSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHH
T ss_pred cCCEEeCCCCCCCC------cHHHHHHHHHCCCEEEcCCC-CCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHH
Confidence 78999999985 33 45899999999987777542 2344433 233446788888775442 122
Q ss_pred ----HHHHHHHHHcCCcEEEEecCCCCCcch---hHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 142 ----AQLVKRAERAGFKAIALTVDTPRLGRR---EADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 142 ----~~~~~~a~~aG~~al~vtvd~p~~g~r---~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+...+++.|.. ++.|..... ...++.-.... . ..+.. ....
T Consensus 83 ~~~~~~l~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~g--~----------------------~~V~~-~~g~ 132 (369)
T 3bw2_A 83 EVYAHQLAGEAAWYETE-----LGDPDGGRDDGYDAKLAVLLDDP--V----------------------PVVSF-HFGV 132 (369)
T ss_dssp HHHHHHTHHHHHHTTCC-----CCCSCSCSSTTHHHHHHHHHHSC--C----------------------SEEEE-ESSC
T ss_pred HHHHHHHHHHHHHcCCC-----cCcccccccccHHHHHHHHHhcC--C----------------------CEEEE-eCCC
Confidence 2223334444543 233321100 00000000000 0 00000 0011
Q ss_pred CCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCC--CCc---CCCCc------cchHHHHHHHHHHhcCC
Q 017434 215 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNH--GAR---QLDYV------PATVMALEEVVQAAKGR 283 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~--gg~---~~~~~------~~~~~~l~~i~~~~~~~ 283 (371)
..++.++++++ .++|++++ +.++++++.+.++|+|+|.+++. ||+ ..+.. ...+..++++++.+ +
T Consensus 133 ~~~~~i~~~~~-~g~~v~~~-v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~ 208 (369)
T 3bw2_A 133 PDREVIARLRR-AGTLTLVT-ATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--D 208 (369)
T ss_dssp CCHHHHHHHHH-TTCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--S
T ss_pred CcHHHHHHHHH-CCCeEEEE-CCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--C
Confidence 24677888887 47887754 57899999999999999999763 332 21111 23488889988876 7
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhh
Q 017434 284 VPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLA 320 (371)
Q Consensus 284 i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~ 320 (371)
+|||++|||.+++++.+++++|||+|++||+|+....
T Consensus 209 iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e 245 (369)
T 3bw2_A 209 IPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDE 245 (369)
T ss_dssp SCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTT
T ss_pred ceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcc
Confidence 9999999999999999999999999999999986543
No 47
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.67 E-value=3.5e-15 Score=144.78 Aligned_cols=227 Identities=17% Similarity=0.135 Sum_probs=148.3
Q ss_pred ceeecCcccCcceeeccccccccc----CC-hHhHHHHHHHHHcCCcEEecCCCCC--------------CHH------H
Q 017434 65 TTTVLGFNISMPIMIAPTAFQKMA----HP-EGECATARAASAAGTIMTLSSWATS--------------SVE------E 119 (371)
Q Consensus 65 s~~i~G~~~~~Pi~iAPm~~~~~~----~~-~~e~~~a~aa~~~G~~~~~s~~~~~--------------~~e------e 119 (371)
..+|.+.+++++|++|||+...-. .| +-....-+.-++.|+.++++++... +.+ .
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~ 87 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAK 87 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHH
T ss_pred CeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHH
Confidence 467899999999999999865421 12 1112222222245787777654211 111 2
Q ss_pred Hh---ccCCCceEEEEeecC----------------------Ch------------HHHHHHHHHHHHcCCcEEEEecCC
Q 017434 120 VS---STGPGIRFFQLYVTK----------------------HR------------NVDAQLVKRAERAGFKAIALTVDT 162 (371)
Q Consensus 120 i~---~~~~~~~~~QLy~~~----------------------d~------------~~~~~~~~~a~~aG~~al~vtvd~ 162 (371)
+. .....+.++||+... .+ +...+.+++++++||++|.|+..|
T Consensus 88 ~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~ 167 (338)
T 1z41_A 88 LTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAH 167 (338)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred HHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecccc
Confidence 22 123367899998521 22 345667788889999999999876
Q ss_pred CCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEcc-----
Q 017434 163 PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVL----- 237 (371)
Q Consensus 163 p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~----- 237 (371)
... -+.|-.|.. +.++ ... | +. +. ....+..+.++.+|+.++.||.+|+..
T Consensus 168 gyL-------l~qFlsp~~-n~R~-----------d~y-G-Gs-le--nr~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 168 GYL-------IHEFLSPLS-NHRT-----------DEY-G-GS-PE--NRYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp TSH-------HHHHHCTTT-CCCC-----------STT-S-SS-HH--HHHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred chH-------HHHccCCCc-CCcC-----------ccc-C-cc-hh--hhHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 331 122322310 1000 000 0 01 11 124467799999999999999999864
Q ss_pred ---CHH----HHHHHHHhCCCEEEEeCCCCc-C-CCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-C
Q 017434 238 ---TAE----DASLAIQYGAAGIIVSNHGAR-Q-LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG-A 306 (371)
Q Consensus 238 ---~~e----~a~~a~~~Gad~I~vs~~gg~-~-~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lG-A 306 (371)
+.+ .++.+.++|+|+|.+++.... + ...++ ..++.+.++++.+ ++||+++|||++++++.++++.| |
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G~a 301 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNGRA 301 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcCCc
Confidence 233 367888999999999864321 1 11222 2467788888888 79999999999999999999999 9
Q ss_pred CEEEEchhHHH
Q 017434 307 SGVFVGRPVPF 317 (371)
Q Consensus 307 d~V~iGr~~l~ 317 (371)
|+|++||+++.
T Consensus 302 D~V~iGR~~i~ 312 (338)
T 1z41_A 302 DLIFIGRELLR 312 (338)
T ss_dssp SEEEECHHHHH
T ss_pred eEEeecHHHHh
Confidence 99999999985
No 48
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.58 E-value=4.5e-14 Score=138.26 Aligned_cols=223 Identities=18% Similarity=0.121 Sum_probs=148.1
Q ss_pred ceeecCcccCcceeecccccccccCCh---HhHHHHHHHHHcCCcEEecCCCCC--------------CHH------HHh
Q 017434 65 TTTVLGFNISMPIMIAPTAFQKMAHPE---GECATARAASAAGTIMTLSSWATS--------------SVE------EVS 121 (371)
Q Consensus 65 s~~i~G~~~~~Pi~iAPm~~~~~~~~~---~e~~~a~aa~~~G~~~~~s~~~~~--------------~~e------ei~ 121 (371)
..+|.+..++++|++|||+...-..++ .|..+..-++++++.++++++... +.+ .+.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (365)
T 2gou_A 8 PITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVT 87 (365)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHH
Confidence 467889999999999999865421122 266677777777877777654211 122 222
Q ss_pred c---cCCCceEEEEeec-----------------------------------------CCh------------HHHHHHH
Q 017434 122 S---TGPGIRFFQLYVT-----------------------------------------KHR------------NVDAQLV 145 (371)
Q Consensus 122 ~---~~~~~~~~QLy~~-----------------------------------------~d~------------~~~~~~~ 145 (371)
+ ....+.++||+.. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (365)
T 2gou_A 88 EAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAA 167 (365)
T ss_dssp HHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 1 1236789999730 112 4556777
Q ss_pred HHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHh
Q 017434 146 KRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT 225 (371)
Q Consensus 146 ~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~ 225 (371)
++++++||++|.|+..|... -+.|-.|.. +.++ ... + +. +. ....+..++++.+|+
T Consensus 168 ~~a~~aGfDgVeih~a~gYL-------l~qFlsp~~-N~R~-----------D~y-G-Gs-le--nr~r~~~eiv~avr~ 223 (365)
T 2gou_A 168 LNAMEAGFDGIELHAANGYL-------INQFIDSEA-NNRS-----------DEY-G-GS-LE--NRLRFLDEVVAALVD 223 (365)
T ss_dssp HHHHHTTCSEEEEECCTTSH-------HHHHHSGGG-CCCC-----------STT-S-SS-HH--HHTHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEecccchh-------HhhccCCCc-cCcC-----------ccc-C-cc-hh--hhHHHHHHHHHHHHH
Confidence 88899999999999876331 112222210 0000 000 0 01 11 234467789999999
Q ss_pred hcCC-CEEEEEccC-----------HHH----HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEE
Q 017434 226 ITSL-PILVKGVLT-----------AED----ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 226 ~~~~-pv~vK~v~~-----------~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via 288 (371)
.++- ||.+|+... .++ ++.+.++|+|+|.+++... +..+ ..++.+.++++.+ ++|||+
T Consensus 224 ~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~---~~~~~~~~~~~~~i~~~~--~iPvi~ 298 (365)
T 2gou_A 224 AIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW---DDAPDTPVSFKRALREAY--QGVLIY 298 (365)
T ss_dssp HHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT---TBCCCCCHHHHHHHHHHC--CSEEEE
T ss_pred HcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc---CCCCCccHHHHHHHHHHC--CCcEEE
Confidence 9843 999998742 233 7888999999999987421 1111 1356778888887 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
+||| +++++.++|+.| ||+|++||+++.
T Consensus 299 ~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 299 AGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp ESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred eCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 9999 899999999998 999999999985
No 49
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.56 E-value=2.5e-13 Score=132.97 Aligned_cols=224 Identities=18% Similarity=0.118 Sum_probs=149.2
Q ss_pred ceeecCcccCcceeecccccccccCCh---HhHHHHHHHHHcCCcEEecCCCC--------------CCHH------HHh
Q 017434 65 TTTVLGFNISMPIMIAPTAFQKMAHPE---GECATARAASAAGTIMTLSSWAT--------------SSVE------EVS 121 (371)
Q Consensus 65 s~~i~G~~~~~Pi~iAPm~~~~~~~~~---~e~~~a~aa~~~G~~~~~s~~~~--------------~~~e------ei~ 121 (371)
..+|.+..+++.|++|||+...-..++ .|..+..-++++|+.++++++.. .+.+ .+.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (364)
T 1vyr_A 8 PLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKIT 87 (364)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHH
Confidence 467889999999999999865321222 36677777888888888775421 0122 222
Q ss_pred ---ccCCCceEEEEeec-----------------------------------------CCh------------HHHHHHH
Q 017434 122 ---STGPGIRFFQLYVT-----------------------------------------KHR------------NVDAQLV 145 (371)
Q Consensus 122 ---~~~~~~~~~QLy~~-----------------------------------------~d~------------~~~~~~~ 145 (371)
.....+.++||+.. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (364)
T 1vyr_A 88 AGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAV 167 (364)
T ss_dssp HHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 12336789999730 122 3556677
Q ss_pred HHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHh
Q 017434 146 KRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT 225 (371)
Q Consensus 146 ~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~ 225 (371)
++++++||++|.|+..|... -++|-.|. .+.++ ... | +. +. ....+..++++.+|+
T Consensus 168 ~~a~~aGfDgVeih~a~GyL-------l~qFlsp~-~N~R~-----------D~y-G-Gs-le--nr~r~~~eiv~avr~ 223 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGYL-------LHQFLSPS-SNQRT-----------DQY-G-GS-VE--NRARLVLEVVDAVCN 223 (364)
T ss_dssp HHHHHTTCSEEEEEECTTSH-------HHHHHCTT-TCCCC-----------STT-S-SS-HH--HHTHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCccchH-------HHhccCCc-ccccC-----------CcC-C-cc-hh--cChhhHHHHHHHHHH
Confidence 88899999999999876321 12222221 00000 000 0 01 11 234567789999999
Q ss_pred hcC-CCEEEEEccC------------HHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 226 ITS-LPILVKGVLT------------AED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 226 ~~~-~pv~vK~v~~------------~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.++ .||.+|+... .++ ++.+.++|+|+|.+++.+..+.. +..++.+.++++.+ ++|||+
T Consensus 224 ~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~--~iPvi~ 299 (364)
T 1vyr_A 224 EWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERF--HGVIIG 299 (364)
T ss_dssp HSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHC--CSEEEE
T ss_pred hcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHC--CCCEEE
Confidence 984 3999998642 223 78889999999999864221111 12456788888887 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
.||| +++++.++|+.| ||+|++||+++.
T Consensus 300 ~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 300 AGAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp ESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ECCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 9999 899999999998 999999999985
No 50
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.56 E-value=8.6e-14 Score=136.78 Aligned_cols=224 Identities=16% Similarity=0.119 Sum_probs=146.8
Q ss_pred cceeecCcccCcceeecccccccccCCh---HhHHHHHHHHHcCCcEEecCCCCC--------------CHH------HH
Q 017434 64 MTTTVLGFNISMPIMIAPTAFQKMAHPE---GECATARAASAAGTIMTLSSWATS--------------SVE------EV 120 (371)
Q Consensus 64 ~s~~i~G~~~~~Pi~iAPm~~~~~~~~~---~e~~~a~aa~~~G~~~~~s~~~~~--------------~~e------ei 120 (371)
...+|.+..+++.|++|||+...- ++ .|..++.-++++|+.++++++... +.+ .+
T Consensus 13 ~P~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l 90 (377)
T 2r14_A 13 TPLQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGV 90 (377)
T ss_dssp SCEEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHH
T ss_pred CCeeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHH
Confidence 357889999999999999986532 22 356677777777877777654211 122 22
Q ss_pred h---ccCCCceEEEEeec------------------------------------------CCh------------HHHHH
Q 017434 121 S---STGPGIRFFQLYVT------------------------------------------KHR------------NVDAQ 143 (371)
Q Consensus 121 ~---~~~~~~~~~QLy~~------------------------------------------~d~------------~~~~~ 143 (371)
. .....+.++||+.. ..+ +...+
T Consensus 91 ~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~ 170 (377)
T 2r14_A 91 VEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQ 170 (377)
T ss_dssp HHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHH
Confidence 2 12236789999741 122 35567
Q ss_pred HHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHH
Q 017434 144 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWL 223 (371)
Q Consensus 144 ~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 223 (371)
.+++|+++||++|.|+..|-. +-+.|-.|. .+.+. ... | +. +. ....+..++++.+
T Consensus 171 aA~~a~~aGfDgVEIh~a~GY-------Ll~QFlsp~-~N~R~-----------D~y-G-Gs-le--nR~r~~~eiv~aV 226 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANAC-------LPNQFLATG-TNRRT-----------DQY-G-GS-IE--NRARFPLEVVDAV 226 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTC-------HHHHHHSTT-TCCCC-----------STT-S-SS-HH--HHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCcccc-------hHHhccCCc-cccCC-----------Ccc-C-cc-hh--hchHHHHHHHHHH
Confidence 778889999999999987622 112232221 00000 000 0 01 11 1244677899999
Q ss_pred HhhcC-CCEEEEEccC-----------HHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 224 QTITS-LPILVKGVLT-----------AED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 224 r~~~~-~pv~vK~v~~-----------~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
|+.++ .||.+|+... .++ ++.+.++|+|+|.+++....+...+ ..++.+.++++.+ ++|||
T Consensus 227 r~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi 303 (377)
T 2r14_A 227 AEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLI 303 (377)
T ss_dssp HHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEE
T ss_pred HHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHC--CCCEE
Confidence 99985 3999998532 233 7888899999999976421111111 1456778888887 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
++||| +++++.++|+.| ||+|++||+++.
T Consensus 304 ~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 304 YCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp EESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred EECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 99999 699999999998 999999999985
No 51
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.55 E-value=8.8e-13 Score=127.91 Aligned_cols=228 Identities=18% Similarity=0.149 Sum_probs=144.1
Q ss_pred cceeecCcccCcceeeccccccccc----CC-hHhHHHHHHHHHcCCcEEecCCCC--------------CC---H---H
Q 017434 64 MTTTVLGFNISMPIMIAPTAFQKMA----HP-EGECATARAASAAGTIMTLSSWAT--------------SS---V---E 118 (371)
Q Consensus 64 ~s~~i~G~~~~~Pi~iAPm~~~~~~----~~-~~e~~~a~aa~~~G~~~~~s~~~~--------------~~---~---e 118 (371)
...+|.+.++++-|++|||.-.... .| +-.+..-+.-++-|+.+++++... .+ + .
T Consensus 7 ~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~ 86 (340)
T 3gr7_A 7 SPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLR 86 (340)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHH
T ss_pred CCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHH
Confidence 4578889999999999999743211 12 112233333334566666653211 01 1 1
Q ss_pred HHhc---cCCCceEEEEeecC---------------------------C-------hHHHHHHHHHHHHcCCcEEEEecC
Q 017434 119 EVSS---TGPGIRFFQLYVTK---------------------------H-------RNVDAQLVKRAERAGFKAIALTVD 161 (371)
Q Consensus 119 ei~~---~~~~~~~~QLy~~~---------------------------d-------~~~~~~~~~~a~~aG~~al~vtvd 161 (371)
.+.+ ......++||.... + .+...+.+++|+++||++|.|+..
T Consensus 87 ~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a 166 (340)
T 3gr7_A 87 ELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAA 166 (340)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 1221 23367788985311 0 112345567788899999999987
Q ss_pred CCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccC---
Q 017434 162 TPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT--- 238 (371)
Q Consensus 162 ~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~--- 238 (371)
+-. +-+.|-.|.. +.++ .. -| +. +. ....+..++++.+|+.++.||.+|+...
T Consensus 167 ~Gy-------Ll~qFlsp~~-N~R~-----------D~-yG-Gs-le--nR~r~~~eiv~avr~~v~~pv~vRls~~~~~ 222 (340)
T 3gr7_A 167 HGY-------LINEFLSPLS-NRRQ-----------DE-YG-GS-PE--NRYRFLGEVIDAVREVWDGPLFVRISASDYH 222 (340)
T ss_dssp TTC-------HHHHHHCTTT-CCCC-----------ST-TS-SS-HH--HHHHHHHHHHHHHHHHCCSCEEEEEESCCCS
T ss_pred cch-------HHHHcCCCcc-CcCC-----------Cc-cc-CC-HH--HHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 522 1122322310 1000 00 00 01 11 1234678999999999999999999742
Q ss_pred -----H----HHHHHHHHhCCCEEEEeCCCCcC--CCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-
Q 017434 239 -----A----EDASLAIQYGAAGIIVSNHGARQ--LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG- 305 (371)
Q Consensus 239 -----~----e~a~~a~~~Gad~I~vs~~gg~~--~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lG- 305 (371)
. +-++.+.++|+|+|.+++.+... ...++ ..++.+.++++.+ ++|||++|||++++++.++|+.|
T Consensus 223 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp TTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHCCC
Confidence 2 34788999999999998632111 11122 2567788888888 79999999999999999999999
Q ss_pred CCEEEEchhHHH
Q 017434 306 ASGVFVGRPVPF 317 (371)
Q Consensus 306 Ad~V~iGr~~l~ 317 (371)
||+|++||+++.
T Consensus 301 aD~V~iGR~~la 312 (340)
T 3gr7_A 301 ADLVFLGRELLR 312 (340)
T ss_dssp CSEEEECHHHHH
T ss_pred eeEEEecHHHHh
Confidence 999999999985
No 52
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.51 E-value=7.6e-13 Score=131.05 Aligned_cols=152 Identities=15% Similarity=0.049 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHH
Q 017434 139 NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWK 218 (371)
Q Consensus 139 ~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (371)
+...+.+++|+++||++|.|+..+-. +-+.|-.|. .+.++ ... | +. +. ....+..+
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGY-------Ll~QFLsp~-~N~Rt-----------D~y-G-Gs-le--nR~rf~~E 226 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGY-------LIDQFLKDG-INDRT-----------DEY-G-GS-LA--NRCKFITQ 226 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTS-------HHHHHHCTT-TCCCC-----------STT-S-SS-HH--HHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCccch-------HHHhccCCc-cCccC-----------Ccc-C-cC-hh--hhhHHHHH
Confidence 45567788899999999999986522 112232231 01000 000 0 01 11 12446779
Q ss_pred HHHHHHhhcC-CCEEEEEccC---------------HHHHHHHHHhC------CCEEEEeCCCCcCCCCcc--------c
Q 017434 219 DVKWLQTITS-LPILVKGVLT---------------AEDASLAIQYG------AAGIIVSNHGARQLDYVP--------A 268 (371)
Q Consensus 219 ~i~~ir~~~~-~pv~vK~v~~---------------~e~a~~a~~~G------ad~I~vs~~gg~~~~~~~--------~ 268 (371)
+++.+|+.++ .||.+|+... .+.++.+.++| +|+|.+++....+....+ .
T Consensus 227 iv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~ 306 (402)
T 2hsa_B 227 VVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEE 306 (402)
T ss_dssp HHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHH
T ss_pred HHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcc
Confidence 9999999985 5999998632 13367888999 999999864321111111 2
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 269 TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 269 ~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
.++.+.++++.+ ++|||++||| +++++.++|+.| ||+|++||+++.
T Consensus 307 ~~~~~~~vk~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 307 EARLMRTLRNAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp HHHHHHHHHHHC--SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred hHHHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 456677888887 7899999999 999999999998 999999999985
No 53
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.49 E-value=5e-13 Score=131.33 Aligned_cols=226 Identities=15% Similarity=0.088 Sum_probs=140.4
Q ss_pred cceeecCcccCcceeecccccccc--cCChHhHHHHHHHHHc-CCcEEecCCCCC--------------CHH------HH
Q 017434 64 MTTTVLGFNISMPIMIAPTAFQKM--AHPEGECATARAASAA-GTIMTLSSWATS--------------SVE------EV 120 (371)
Q Consensus 64 ~s~~i~G~~~~~Pi~iAPm~~~~~--~~~~~e~~~a~aa~~~-G~~~~~s~~~~~--------------~~e------ei 120 (371)
...+|.+..+++.|++|||+...- ..| .+..+.--..++ |+.++++++... +.+ .+
T Consensus 18 ~P~~ig~~~l~NRiv~aPm~~~~a~~g~p-t~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l 96 (376)
T 1icp_A 18 SPCKMGKFELCHRVVLAPLTRQRSYGYIP-QPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPI 96 (376)
T ss_dssp SCEEETTEEESCSEEECCCCCCCCGGGSC-CHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHH
T ss_pred CCeeECCEEECCccEECCcCcCcCCCCCC-CHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCCHHHHHHHHHH
Confidence 347888999999999999976531 122 133322222222 667777665211 122 22
Q ss_pred hc---cCCCceEEEEeec-------------------------------------CCh------------HHHHHHHHHH
Q 017434 121 SS---TGPGIRFFQLYVT-------------------------------------KHR------------NVDAQLVKRA 148 (371)
Q Consensus 121 ~~---~~~~~~~~QLy~~-------------------------------------~d~------------~~~~~~~~~a 148 (371)
.+ ....+.++||+.. ..+ +...+.+++|
T Consensus 97 ~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a 176 (376)
T 1icp_A 97 VDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNA 176 (376)
T ss_dssp HHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 21 2236789999751 012 3556777889
Q ss_pred HHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcC
Q 017434 149 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITS 228 (371)
Q Consensus 149 ~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~ 228 (371)
+++||++|.|+..|-. +-++|-.|. .+.+. ... | +. +. ....+..++++.+|+.++
T Consensus 177 ~~aGfDgVEih~a~Gy-------Ll~qFlsp~-~N~R~-----------D~y-G-Gs-le--nR~r~~~eiv~aVr~avg 232 (376)
T 1icp_A 177 IEAGFDGVEIHGAHGY-------LIDQFMKDQ-VNDRS-----------DKY-G-GS-LE--NRCRFALEIVEAVANEIG 232 (376)
T ss_dssp HHTTCSEEEEEECTTS-------HHHHHHCTT-TCCCC-----------STT-S-SS-HH--HHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCEEEEcCccch-------hhhhccCCc-ccCCC-----------Ccc-C-cc-HH--HhHHHHHHHHHHHHHHhc
Confidence 9999999999987632 112232221 01000 000 0 01 11 124467789999999985
Q ss_pred -CCEEEEEccC---------------HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 229 -LPILVKGVLT---------------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 229 -~pv~vK~v~~---------------~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
.||.+|+... .+.++.+.++|+|+|.+++....+...+...+..+.++++.+ ++|||++|||
T Consensus 233 ~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~i 310 (376)
T 1icp_A 233 SDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGGY 310 (376)
T ss_dssp GGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESSC
T ss_pred CCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--CCCEEEeCCC
Confidence 3999998621 234677889999999997642111100111234467777877 7899999999
Q ss_pred CCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 293 RRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 293 ~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
+.+++.++|+.| ||+|++||+++.
T Consensus 311 -~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 311 -DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp -CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred -CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 899999999988 999999999985
No 54
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.49 E-value=5.6e-12 Score=122.72 Aligned_cols=150 Identities=21% Similarity=0.234 Sum_probs=103.4
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.+.+++|+++||++|.|+..|-.. -+.|--|. .+.++ .. -| +. +. ....+..++++
T Consensus 155 ~~aA~~a~~aGfDgVEih~a~GyL-------l~qFlsp~-~N~R~-----------D~-yG-Gs-le--nR~r~~~eiv~ 210 (349)
T 3hgj_A 155 VEGARRALRAGFQVIELHMAHGYL-------LSSFLSPL-SNQRT-----------DA-YG-GS-LE--NRMRFPLQVAQ 210 (349)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTSH-------HHHHHCTT-TCCCC-----------ST-TS-SS-HH--HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCccchH-------HHHhcCCc-ccccC-----------CC-CC-cC-HH--HHHHHHHHHHH
Confidence 455677888999999999876221 12221121 00000 00 00 00 11 12346778999
Q ss_pred HHHhhc--CCCEEEEEcc--------CHHH----HHHHHHhCCCEEEEeCCCCcC---CCCcc-chHHHHHHHHHHhcCC
Q 017434 222 WLQTIT--SLPILVKGVL--------TAED----ASLAIQYGAAGIIVSNHGARQ---LDYVP-ATVMALEEVVQAAKGR 283 (371)
Q Consensus 222 ~ir~~~--~~pv~vK~v~--------~~e~----a~~a~~~Gad~I~vs~~gg~~---~~~~~-~~~~~l~~i~~~~~~~ 283 (371)
.+|+.+ +.||.+|+.. +.++ ++.+.++|+|+|.+++.+-.. ...++ ..++.+.++++.+ +
T Consensus 211 aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~ 288 (349)
T 3hgj_A 211 AVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--G 288 (349)
T ss_dssp HHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--C
T ss_pred HHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--C
Confidence 999999 6899999874 3444 678889999999998632111 11122 3567788888887 7
Q ss_pred CcEEEecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 284 VPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 284 i~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
+||+++|||++++++.++++.| ||+|++||+++.
T Consensus 289 iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 289 LRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp CEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred ceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 9999999999999999999999 999999999985
No 55
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.46 E-value=7.2e-13 Score=152.48 Aligned_cols=213 Identities=14% Similarity=0.172 Sum_probs=144.0
Q ss_pred eeccccC-CCCCCccceee---cCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHH------
Q 017434 51 FRPRILR-DVSKIDMTTTV---LGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV------ 120 (371)
Q Consensus 51 l~pr~l~-~~~~~d~s~~i---~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei------ 120 (371)
|.||..+ .-.+++++|.| +| ..||+.|||++.. . +..++.++.++|...+++.....+.+++
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~v-s----~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~ 629 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPTT-V----PWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK 629 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTTT-C----SHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCcc-c----cHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH
Confidence 4677654 22334566554 45 6899999998422 1 4579999999999999944444444433
Q ss_pred -hccC--CCceEEEEeecCChH--HHHHHHHHHHHcCCcE--EEEecCCCCCcchhHHhhhhcCCCCccccccccccccC
Q 017434 121 -SSTG--PGIRFFQLYVTKHRN--VDAQLVKRAERAGFKA--IALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIG 193 (371)
Q Consensus 121 -~~~~--~~~~~~QLy~~~d~~--~~~~~~~~a~~aG~~a--l~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~ 193 (371)
++.. ..++.+++....... ...++++.+.+.|+.. +.+..+.
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~------------------------------- 678 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGV------------------------------- 678 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSC-------------------------------
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCC-------------------------------
Confidence 3334 267788876532221 2457788888889887 4332211
Q ss_pred CCCCCCcchhhhHhhhhcccCCCHH-HHHHHHhhcCCCEEEEEccCHHHHHHH----HHhCCCEEE---EeCC--CCc-C
Q 017434 194 KMDKTDDSGLASYVANQIDRSLNWK-DVKWLQTITSLPILVKGVLTAEDASLA----IQYGAAGII---VSNH--GAR-Q 262 (371)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~ir~~~~~pv~vK~v~~~e~a~~a----~~~Gad~I~---vs~~--gg~-~ 262 (371)
| ..+ .++.+++ .+++++ +.+.+..++..+ .++|+|+|+ +.+. ||+ .
T Consensus 679 -------------------p--~~e~~~~~l~~-~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g 735 (2060)
T 2uva_G 679 -------------------P--SIEVANEYIQT-LGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHS 735 (2060)
T ss_dssp -------------------C--CHHHHHHHHHH-SCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCC
T ss_pred -------------------C--CHHHHHHHHHH-cCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCC
Confidence 1 122 2344443 488887 667777777766 999999999 5431 222 1
Q ss_pred -CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH-----------HcCCCEEEEchhHHHhhhcCChHHH
Q 017434 263 -LDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKAL-----------ALGASGVFVGRPVPFSLAVDGEAGV 327 (371)
Q Consensus 263 -~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal-----------~lGAd~V~iGr~~l~~~~~~G~~gv 327 (371)
.+...+.+..+++|++.+ ++|||+.|||.+++|+.++| ++|||+|++|+.|+....+...+.+
T Consensus 736 ~~d~~~~~l~lv~~i~~~~--~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~ 810 (2060)
T 2uva_G 736 FEDFHQPILLMYSRIRKCS--NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQA 810 (2060)
T ss_dssp SCCSHHHHHHHHHHHHTST--TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHH
T ss_pred cccccchHHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCHHH
Confidence 233356778889998877 79999999999999999999 9999999999999976555444433
No 56
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.43 E-value=1e-11 Score=120.48 Aligned_cols=226 Identities=17% Similarity=0.187 Sum_probs=139.5
Q ss_pred cceeecCcccCcceeecccccccccCChH---h--HHHHHHHHHcCCcEEecCCCC--------------CCHHH-----
Q 017434 64 MTTTVLGFNISMPIMIAPTAFQKMAHPEG---E--CATARAASAAGTIMTLSSWAT--------------SSVEE----- 119 (371)
Q Consensus 64 ~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~---e--~~~a~aa~~~G~~~~~s~~~~--------------~~~ee----- 119 (371)
...+|.+.++++-|++|||.-.. ..++| + +..-..-++-|+.+++++... .+.+.
T Consensus 6 ~P~~ig~~~l~NRiv~apm~~~~-~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~ 84 (343)
T 3kru_A 6 MPLKIKDITIKNRIMMSPMCMYS-ASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELK 84 (343)
T ss_dssp SCEEETTEEESSSEEECCCCCCC-SCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHH
T ss_pred ccceeeeeeeeeeecccchhhee-cccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHH
Confidence 35778899999999999996432 22121 2 233333334466666653210 11121
Q ss_pred -Hhc---cCCCceEEEEeecC----------------------------C-------hHHHHHHHHHHHHcCCcEEEEec
Q 017434 120 -VSS---TGPGIRFFQLYVTK----------------------------H-------RNVDAQLVKRAERAGFKAIALTV 160 (371)
Q Consensus 120 -i~~---~~~~~~~~QLy~~~----------------------------d-------~~~~~~~~~~a~~aG~~al~vtv 160 (371)
+.+ ......++||.-.. + .+...+.+++|+++||++|.|+.
T Consensus 85 ~~~~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ 164 (343)
T 3kru_A 85 KIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHA 164 (343)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEec
Confidence 221 22366788985311 0 11234556778889999999984
Q ss_pred CCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc--CCCEEEEEccC
Q 017434 161 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKGVLT 238 (371)
Q Consensus 161 d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~v~~ 238 (371)
-. |+ +-+.|.+|.. +.++ ..-| +. +. ....+..++++.+|+.+ +.||.+|+..+
T Consensus 165 ah---GY----Ll~qFlsp~~-N~R~------------D~yG-Gs-le--nR~rf~~eiv~aVr~avg~d~pv~vRls~~ 220 (343)
T 3kru_A 165 AH---GY----LIHEFLSPLS-NKRK------------DEYG-NS-IE--NRARFLIEVIDEVRKNWPENKPIFVRVSAD 220 (343)
T ss_dssp CT---TS----HHHHHHCTTT-CCCC------------STTS-SS-HH--HHTHHHHHHHHHHHHTSCTTSCEEEEEECC
T ss_pred cc---ch----hHHHhhcccc-cccc------------hhhc-cc-hH--hHHHHHHHHHHHHHhcCCccCCeEEEeech
Confidence 21 21 1222333320 0000 0000 00 11 12446789999999999 68999998742
Q ss_pred --------HHH----HHHHHHhCCCEEEEeCCCCcC--CCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 017434 239 --------AED----ASLAIQYGAAGIIVSNHGARQ--LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA 303 (371)
Q Consensus 239 --------~e~----a~~a~~~Gad~I~vs~~gg~~--~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~ 303 (371)
.++ ++.+.++ +|+|.++..+... ....+ ..++.+..+++.+ ++|||++|||++++++.++|+
T Consensus 221 ~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~Ae~~l~ 297 (343)
T 3kru_A 221 DYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC--NIKTSAVGLITTQELAEEILS 297 (343)
T ss_dssp CSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCEEEEESSCCCHHHHHHHHH
T ss_pred hhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc--CcccceeeeeeHHHHHHHHHh
Confidence 333 6777888 9999997432111 01112 2567788888888 799999999999999999999
Q ss_pred cC-CCEEEEchhHHH
Q 017434 304 LG-ASGVFVGRPVPF 317 (371)
Q Consensus 304 lG-Ad~V~iGr~~l~ 317 (371)
.| ||+|++||+++.
T Consensus 298 ~G~aD~V~iGR~~la 312 (343)
T 3kru_A 298 NERADLVALGRELLR 312 (343)
T ss_dssp TTSCSEEEESHHHHH
T ss_pred chhhHHHHHHHHHhc
Confidence 98 999999999985
No 57
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.42 E-value=4.4e-12 Score=126.10 Aligned_cols=243 Identities=16% Similarity=0.182 Sum_probs=142.3
Q ss_pred eeeccccC--CCCCCccceee-cCcccCcceeecccccccccCChH---hHHHHHHHHHc-CCcEEecCCCC--------
Q 017434 50 LFRPRILR--DVSKIDMTTTV-LGFNISMPIMIAPTAFQKMAHPEG---ECATARAASAA-GTIMTLSSWAT-------- 114 (371)
Q Consensus 50 ~l~pr~l~--~~~~~d~s~~i-~G~~~~~Pi~iAPm~~~~~~~~~~---e~~~a~aa~~~-G~~~~~s~~~~-------- 114 (371)
.|+||... ..+..=...+| .|.++++-|++|||.-.. ..++| +..+.--.+++ |+.+++++...
T Consensus 13 ~~~~~~~~M~~~~~Lf~P~~i~g~~~lkNRiv~aPm~~~~-a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~ 91 (419)
T 3l5a_A 13 GLVPRGSHMYRYKPLLQSIHLPNGIKISNRFVLSPMTVNA-STKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLF 91 (419)
T ss_dssp --------CCTTGGGGSCEECTTSCEESSSEEECCCCCCC-SCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCS
T ss_pred CcccccccccchhhcCCCEEeCCCCEECCCeEeCCCCCCc-cCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccC
Confidence 46777532 34455567888 899999999999996432 22222 22222222222 67777654311
Q ss_pred ------CCHH------HHhc---cCCCceEEEEeecCC--------------------------------h-------HH
Q 017434 115 ------SSVE------EVSS---TGPGIRFFQLYVTKH--------------------------------R-------NV 140 (371)
Q Consensus 115 ------~~~e------ei~~---~~~~~~~~QLy~~~d--------------------------------~-------~~ 140 (371)
.+.+ .+.+ ......++||+-..- . +.
T Consensus 92 ~~~~gi~~d~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~ 171 (419)
T 3l5a_A 92 EYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQ 171 (419)
T ss_dssp TTCEECSSGGGHHHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHH
Confidence 1111 1222 223567888853110 0 12
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..+.+++|+++||+.|.|+..+-. +-+.|--|. .+.++ ... | +..+. ....|..+++
T Consensus 172 F~~AA~rA~~AGfDgVEIH~ahGY-------Ll~QFlSp~-~N~Rt-----------D~y-G-Gs~le--nR~Rf~~evv 228 (419)
T 3l5a_A 172 YRDATLRAIKAGFDGVEISIAQRL-------LIQTFFSTF-SNRRT-----------DHY-G-ADSLK--NRARLCLEVM 228 (419)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTS-------HHHHHHCTT-TCCCC-----------STT-S-TTCHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCccch-------HHHHccCCc-ccccc-----------cCC-C-Cchhh--hhhHHHHHHH
Confidence 345567888899999999986521 112221121 01110 000 0 01101 1234677899
Q ss_pred HHHHhhc------CCCEEEEEcc----------CHHH----HHHHHH-hCCCEEEEeCCCCc-----CCCCcc-chHHHH
Q 017434 221 KWLQTIT------SLPILVKGVL----------TAED----ASLAIQ-YGAAGIIVSNHGAR-----QLDYVP-ATVMAL 273 (371)
Q Consensus 221 ~~ir~~~------~~pv~vK~v~----------~~e~----a~~a~~-~Gad~I~vs~~gg~-----~~~~~~-~~~~~l 273 (371)
+.+|+.+ +.||.+|+.. +.++ ++.+.+ +|+|+|.|++.+.. +...++ ..+..+
T Consensus 229 ~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a 308 (419)
T 3l5a_A 229 RAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVN 308 (419)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHH
T ss_pred HHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHH
Confidence 9999987 6799999753 3343 677888 99999999875321 111122 133566
Q ss_pred HHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 274 EEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 274 ~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
..+++.+++++|||++|||++++++.++|+. ||+|++||+++.
T Consensus 309 ~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 309 QIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp HHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 7777877657999999999999999999999 999999999874
No 58
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.40 E-value=7.2e-12 Score=131.82 Aligned_cols=228 Identities=13% Similarity=0.066 Sum_probs=143.8
Q ss_pred cceeecCcccCcceeecccccccccCCh-Hh--HHHHHHHHHcCCcEEecCCCCC--------------CHH------HH
Q 017434 64 MTTTVLGFNISMPIMIAPTAFQKMAHPE-GE--CATARAASAAGTIMTLSSWATS--------------SVE------EV 120 (371)
Q Consensus 64 ~s~~i~G~~~~~Pi~iAPm~~~~~~~~~-~e--~~~a~aa~~~G~~~~~s~~~~~--------------~~e------ei 120 (371)
...+|.+.+++++|++|||+...-..+. .+ ...-+.-++.|..++++++.+. +.+ .+
T Consensus 7 ~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (671)
T 1ps9_A 7 APLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTI 86 (671)
T ss_dssp CCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHH
T ss_pred CCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHH
Confidence 3467889999999999999753211121 12 2222223356777777654210 111 12
Q ss_pred h---ccCCCceEEEEeecC---------------------Ch------------HHHHHHHHHHHHcCCcEEEEecCCCC
Q 017434 121 S---STGPGIRFFQLYVTK---------------------HR------------NVDAQLVKRAERAGFKAIALTVDTPR 164 (371)
Q Consensus 121 ~---~~~~~~~~~QLy~~~---------------------d~------------~~~~~~~~~a~~aG~~al~vtvd~p~ 164 (371)
. ...+.+.++||+... .+ +...+.+++++++||+++.|+..+..
T Consensus 87 ~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gy 166 (671)
T 1ps9_A 87 TEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGY 166 (671)
T ss_dssp HHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTS
T ss_pred HHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccch
Confidence 1 123367899997521 22 35566778889999999999987533
Q ss_pred CcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc--CCCEEEEEcc-----
Q 017434 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKGVL----- 237 (371)
Q Consensus 165 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~v~----- 237 (371)
+-+.|-.|. .+.++ ... | +. +. ....+..+.++.+|+.+ +.|+.+|+..
T Consensus 167 -------l~~qFlsp~-~n~r~-----------d~y-G-gs-~~--~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~ 222 (671)
T 1ps9_A 167 -------LINEFLTLR-TNQRS-----------DQW-G-GD-YR--NRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE 222 (671)
T ss_dssp -------HHHHHHCTT-TCCCC-----------STT-S-SS-HH--HHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST
T ss_pred -------HHHHhCCCc-cCCCc-----------CcC-C-Cc-HH--HHHHHHHHHHHHHHHHcCCCceEEEEECccccCC
Confidence 112232221 01000 000 0 01 11 12446779999999999 7899999862
Q ss_pred ---CHH----HHHHHHHhCCCEEEEeCCCCcC------CCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 017434 238 ---TAE----DASLAIQYGAAGIIVSNHGARQ------LDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA 303 (371)
Q Consensus 238 ---~~e----~a~~a~~~Gad~I~vs~~gg~~------~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~ 303 (371)
+.+ .++.+.++|+|+|.+++..... .+..+ ..++.+.++++.+ ++||+++|||.+++++.++++
T Consensus 223 ~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~ 300 (671)
T 1ps9_A 223 DGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILS 300 (671)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeCCCCCHHHHHHHHH
Confidence 333 3678889999999997532110 11111 1246667777666 799999999999999999999
Q ss_pred cC-CCEEEEchhHHH
Q 017434 304 LG-ASGVFVGRPVPF 317 (371)
Q Consensus 304 lG-Ad~V~iGr~~l~ 317 (371)
.| ||+|++||+++.
T Consensus 301 ~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 301 RGDADMVSMARPFLA 315 (671)
T ss_dssp TTSCSEEEESTHHHH
T ss_pred cCCCCEEEeCHHHHh
Confidence 98 999999999985
No 59
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.37 E-value=4.6e-11 Score=116.82 Aligned_cols=102 Identities=21% Similarity=0.092 Sum_probs=81.2
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEEcc---------CHHH----HHHHHHhCCCEEEEeCCCCc---CCCCcc-chHHHHH
Q 017434 214 SLNWKDVKWLQTIT--SLPILVKGVL---------TAED----ASLAIQYGAAGIIVSNHGAR---QLDYVP-ATVMALE 274 (371)
Q Consensus 214 ~~~~~~i~~ir~~~--~~pv~vK~v~---------~~e~----a~~a~~~Gad~I~vs~~gg~---~~~~~~-~~~~~l~ 274 (371)
.+..++++.+|+.+ +.||.+|+.. +.++ ++.+.++|+|+|.+++.+-. ....++ ..++.+.
T Consensus 209 r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ 288 (363)
T 3l5l_A 209 RFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAE 288 (363)
T ss_dssp HHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHH
Confidence 46678999999998 5899999863 2333 67888999999999864211 111222 2567788
Q ss_pred HHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 275 EVVQAAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 275 ~i~~~~~~~i~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
.+++.+ ++||+++|||++++++.++|+.| ||+|++||+++.
T Consensus 289 ~ir~~~--~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 289 RVRREA--KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHHH--TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHc--CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 888888 79999999999999999999999 999999999985
No 60
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.36 E-value=1.3e-11 Score=131.00 Aligned_cols=226 Identities=12% Similarity=0.099 Sum_probs=139.9
Q ss_pred ceeecCcccCcceeecccccccc-cCChHhHHHHHHHHHcCCcEEecCCCC-------C--------CHH------HHhc
Q 017434 65 TTTVLGFNISMPIMIAPTAFQKM-AHPEGECATARAASAAGTIMTLSSWAT-------S--------SVE------EVSS 122 (371)
Q Consensus 65 s~~i~G~~~~~Pi~iAPm~~~~~-~~~~~e~~~a~aa~~~G~~~~~s~~~~-------~--------~~e------ei~~ 122 (371)
..+|.+.+++++|++|||+...- ..|.-....-+.-++.|+.++++++.+ . +.+ ++.+
T Consensus 12 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTD 91 (729)
T ss_dssp CEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHH
Confidence 47789999999999999975321 122211222222235677777664311 0 111 1211
Q ss_pred ---cCCCceEEEEeecC-----------------------C---------------hHHHHHHHHHHHHcCCcEEEEecC
Q 017434 123 ---TGPGIRFFQLYVTK-----------------------H---------------RNVDAQLVKRAERAGFKAIALTVD 161 (371)
Q Consensus 123 ---~~~~~~~~QLy~~~-----------------------d---------------~~~~~~~~~~a~~aG~~al~vtvd 161 (371)
....+.++||+... + .+...+.+++|+++||++|.|+..
T Consensus 92 ~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a 171 (729)
T 1o94_A 92 EVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGA 171 (729)
T ss_dssp HHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 22367899997620 0 145567778889999999999987
Q ss_pred CCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc--CCCEEEEEcc--
Q 017434 162 TPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKGVL-- 237 (371)
Q Consensus 162 ~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~v~-- 237 (371)
+-. +-+.|--|. .+.+ .... | +. +. ....|..++++.+|+.+ +.||.+|+..
T Consensus 172 ~gy-------Ll~qFlsp~-~N~R-----------~D~y-G-Gs-~e--nR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 172 HSY-------LPLQFLNPY-YNKR-----------TDKY-G-GS-LE--NRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp TTC-------HHHHHHCTT-TCCC-----------CSTT-S-SS-HH--HHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred cch-------HHHHhcCCc-cCCC-----------cCcC-C-CC-HH--HHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 632 122231121 0100 0000 0 11 11 23457789999999999 7899999852
Q ss_pred -------C-HHH----HHHHHHhCCCEEEEeCCCC-----c---CCCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 238 -------T-AED----ASLAIQYGAAGIIVSNHGA-----R---QLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 238 -------~-~e~----a~~a~~~Gad~I~vs~~gg-----~---~~~~~~~-~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
+ .++ ++.+ +.|+|.+.+++.+. . +....+. .+.....+++.+ ++|||++|||.+++
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l-~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~ 304 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMA-DSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPE 304 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHH-GGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHH
T ss_pred CcCCCCCCchHHHHHHHHHH-HhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC--CCEEEEeCCCCCHH
Confidence 1 223 3444 44899999976321 0 0111111 356677787776 79999999999999
Q ss_pred HHHHHHHcC-CCEEEEchhHHH
Q 017434 297 DVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 297 dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
++.++|+.| ||+|++||+++.
T Consensus 305 ~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 305 KMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp HHHHHHHTTSCSBEEESHHHHH
T ss_pred HHHHHHHCCCCCEEEeCchhhc
Confidence 999999998 999999999874
No 61
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.30 E-value=7.6e-11 Score=124.42 Aligned_cols=227 Identities=11% Similarity=0.014 Sum_probs=141.4
Q ss_pred cceeecCcccCcceeecccccccccCChHh--HHHHHHHHHcCCcEEecCCCCC----------C-----HH------HH
Q 017434 64 MTTTVLGFNISMPIMIAPTAFQKMAHPEGE--CATARAASAAGTIMTLSSWATS----------S-----VE------EV 120 (371)
Q Consensus 64 ~s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e--~~~a~aa~~~G~~~~~s~~~~~----------~-----~e------ei 120 (371)
...+|.+.+++++|++|||+... ..+..+ ....+..++.|+.++++++... . .+ ++
T Consensus 16 ~p~~ig~~~l~NRiv~apm~~~~-~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (690)
T 3k30_A 16 EPVQIGPFTTKNRFYQVPHCNGM-GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRI 94 (690)
T ss_dssp CCCEETTEECSSSEEECCCCCSC-SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHH
T ss_pred CCeeECCEEECCCeEeCCCcCCC-CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHH
Confidence 34788899999999999997432 223222 1244445667777777654210 1 11 11
Q ss_pred hc---cCCCceEEEEeecC-------------------------C---------------hHHHHHHHHHHHHcCCcEEE
Q 017434 121 SS---TGPGIRFFQLYVTK-------------------------H---------------RNVDAQLVKRAERAGFKAIA 157 (371)
Q Consensus 121 ~~---~~~~~~~~QLy~~~-------------------------d---------------~~~~~~~~~~a~~aG~~al~ 157 (371)
.+ ..+.+.++||+... + .+...+.+++|+++||+.|.
T Consensus 95 ~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVe 174 (690)
T 3k30_A 95 ADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVY 174 (690)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 11 22367899998310 0 14456677889999999999
Q ss_pred EecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc--CCCEEEEE
Q 017434 158 LTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKG 235 (371)
Q Consensus 158 vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~ 235 (371)
|+..+++. +-+.|-.|. .+.++ ... | +.. . ....|..++++.+|+.+ +.||.+|+
T Consensus 175 ih~a~gy~------L~~qFlsp~-~N~R~-----------D~y-G-Gs~-e--nR~r~~~ei~~avr~~~g~~~~v~~r~ 231 (690)
T 3k30_A 175 VYGAHGYS------GVHHFLSKR-YNQRT-----------DEY-G-GSL-E--NRMRLLRELLEDTLDECAGRAAVACRI 231 (690)
T ss_dssp EEECTTCS------HHHHHHCTT-TCCCC-----------STT-S-SSH-H--HHTHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred Ecccccch------HHHHhCCCc-cCCCc-----------ccc-C-CCH-H--HHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 99876540 122333332 11110 000 0 011 1 22446789999999999 57999998
Q ss_pred cc--------CHHH----HHHHHHhCCCEEEEeCCCCc-----CCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017434 236 VL--------TAED----ASLAIQYGAAGIIVSNHGAR-----QLDYV-PATVMALEEVVQAAKGRVPVFLDGGVRRGTD 297 (371)
Q Consensus 236 v~--------~~e~----a~~a~~~Gad~I~vs~~gg~-----~~~~~-~~~~~~l~~i~~~~~~~i~via~GGI~~~~d 297 (371)
.. +.++ ++.+.+ |+|.|.++..+.. ..... ...+..+..+++.+ ++|||++|||+++++
T Consensus 232 s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~ 308 (690)
T 3k30_A 232 TVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT--TKPVVGVGRFTSPDA 308 (690)
T ss_dssp ECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC--SSCEEECSCCCCHHH
T ss_pred CccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc--CCeEEEeCCCCCHHH
Confidence 52 2343 444545 8999999753210 01111 11245566666666 799999999999999
Q ss_pred HHHHHHcC-CCEEEEchhHHH
Q 017434 298 VFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 298 v~kal~lG-Ad~V~iGr~~l~ 317 (371)
+.++|+.| ||+|++||+++.
T Consensus 309 a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 309 MVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp HHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHCCCcceEEEcHHhHh
Confidence 99999998 999999999874
No 62
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.30 E-value=1.9e-10 Score=105.57 Aligned_cols=170 Identities=16% Similarity=0.031 Sum_probs=113.9
Q ss_pred hHHHHHHHHHcCCcEEecCCCCCCHHHHhccCCCceEEEE---eec----CChHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017434 93 ECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQL---YVT----KHRNVDAQLVKRAERAGFKAIALTVDTPRL 165 (371)
Q Consensus 93 e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QL---y~~----~d~~~~~~~~~~a~~aG~~al~vtvd~p~~ 165 (371)
=..+|+++.+.|+..+.. .+...++++++...-|.+-+. |.. -++ ..+.++.+.++|++.+.+.. ...
T Consensus 38 ~~~~A~a~~~~Ga~~i~~-~~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~--~~~~i~~~~~~Gad~V~l~~--~~~ 112 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRI-EGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITP--FLDDVDALAQAGAAIIAVDG--TAR 112 (232)
T ss_dssp HHHHHHHHHHTTCSEEEE-ESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEEC--CSS
T ss_pred HHHHHHHHHHCCCeEEEE-CCHHHHHHHHHhcCCCEEEEEeecCCCcceEeCc--cHHHHHHHHHcCCCEEEECc--ccc
Confidence 358999999999885432 222234445555444432111 110 111 12345667889999886632 110
Q ss_pred cchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHH
Q 017434 166 GRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLA 245 (371)
Q Consensus 166 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a 245 (371)
.+|....+.++.+++. ++++++ .+.+.++++++
T Consensus 113 ---------------------------------------------~~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~a 145 (232)
T 3igs_A 113 ---------------------------------------------QRPVAVEALLARIHHH-HLLTMA-DCSSVDDGLAC 145 (232)
T ss_dssp ---------------------------------------------CCSSCHHHHHHHHHHT-TCEEEE-ECCSHHHHHHH
T ss_pred ---------------------------------------------CCHHHHHHHHHHHHHC-CCEEEE-eCCCHHHHHHH
Confidence 1122334567777664 666665 46789999999
Q ss_pred HHhCCCEEEEeCCCCcCC-CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 246 IQYGAAGIIVSNHGARQL-DYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 246 ~~~Gad~I~vs~~gg~~~-~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.++|+|+|.+.++|.+.. ....++++.++++++. ++|||+.|||.+++|+.+++++|||+|++|+.++.
T Consensus 146 ~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 146 QRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp HHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 999999997766653321 1234578888888764 69999999999999999999999999999998873
No 63
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.30 E-value=1e-10 Score=114.04 Aligned_cols=141 Identities=16% Similarity=0.044 Sum_probs=96.9
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.+.+++|+++||++|.|+..+-. +-+.|-.|. .+.++ ... | +. +. ....+..++++
T Consensus 164 ~~AA~~A~~aGfDgVEih~a~GY-------Ll~QFLsp~-~N~Rt-----------D~y-G-Gs-le--nR~rf~~evv~ 219 (361)
T 3gka_A 164 RRGAENARAAGFDGVEVHGANGY-------LLDQFLQDS-ANRRT-----------DAY-G-GS-IE--NRARLLLEVVD 219 (361)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTS-------HHHHHHSTT-TCCCC-----------STT-S-SS-HH--HHSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCcc-------HHHhccCcc-ccccc-----------CCC-C-CC-hh--hcHHHHHHHHH
Confidence 35567788899999999986521 112221121 01000 000 0 01 11 12446789999
Q ss_pred HHHhhcC-CCEEEEEccC-----------HH----HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCc
Q 017434 222 WLQTITS-LPILVKGVLT-----------AE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 222 ~ir~~~~-~pv~vK~v~~-----------~e----~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 285 (371)
.+|+.++ -||.+|+... .+ -++.+.++|+|+|.+++.. .++ ..+..+++.+ ++|
T Consensus 220 aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iP 289 (361)
T 3gka_A 220 AAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF-----GGD---AIGQQLKAAF--GGP 289 (361)
T ss_dssp HHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-----STT---CCHHHHHHHH--CSC
T ss_pred HHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-----CCH---HHHHHHHHHc--CCC
Confidence 9999984 3999998642 22 3677889999999998643 112 3466777777 689
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 286 VFLDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
||++||| +++++.++|+.| ||+|++||+++.
T Consensus 290 vi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 290 FIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp EEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred EEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 9999999 999999999998 999999999985
No 64
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.30 E-value=4.5e-11 Score=109.63 Aligned_cols=173 Identities=18% Similarity=0.061 Sum_probs=115.4
Q ss_pred ChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccCCCceE---EEEeec----CChHHHHHHHHHHHHcCCcEEEEecCC
Q 017434 90 PEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRF---FQLYVT----KHRNVDAQLVKRAERAGFKAIALTVDT 162 (371)
Q Consensus 90 ~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~---~QLy~~----~d~~~~~~~~~~a~~aG~~al~vtvd~ 162 (371)
+.-=..+|+++.+.|...+.. .+...++++++...-|.+ -+-|.. -++ ..+.++.+.++|++.+.+..
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~-~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~I~l~~-- 109 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRI-EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADIIAFDA-- 109 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE-ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEEC--
T ss_pred cchHHHHHHHHHHCCCcEEEE-CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCEEEECc--
Confidence 333358999999999886542 222233445555444433 122211 111 12345667789999886532
Q ss_pred CCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHH
Q 017434 163 PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDA 242 (371)
Q Consensus 163 p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a 242 (371)
... .+|....+.++.+++. ++++++ .+.+.+++
T Consensus 110 ~~~---------------------------------------------~~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea 142 (229)
T 3q58_A 110 SFR---------------------------------------------SRPVDIDSLLTRIRLH-GLLAMA-DCSTVNEG 142 (229)
T ss_dssp CSS---------------------------------------------CCSSCHHHHHHHHHHT-TCEEEE-ECSSHHHH
T ss_pred ccc---------------------------------------------CChHHHHHHHHHHHHC-CCEEEE-ecCCHHHH
Confidence 110 1122334567777764 666665 46899999
Q ss_pred HHHHHhCCCEEEEeCCCCcCC-CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQL-DYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~-~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+++.++|+|.|.+.++|.+.. ....++++.++++++. ++|||+.|||.+++|+.+++++|||+|++|+.++.
T Consensus 143 ~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 143 ISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp HHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 999999999998766654321 1235578888888763 69999999999999999999999999999998874
No 65
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.29 E-value=1.3e-10 Score=113.40 Aligned_cols=141 Identities=18% Similarity=0.089 Sum_probs=96.5
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.+.+++|+++||++|.|+..|-. +-+.|--|. .+.++ ... | +.+ . ....+..++++
T Consensus 156 ~~AA~~a~~aGfDgVEih~a~GY-------Ll~QFLSp~-~N~Rt-----------D~y-G-Gsl-e--nR~rf~~eiv~ 211 (362)
T 4ab4_A 156 RSGAENAKAAGFDGVEIHGANGY-------LLDQFLQSS-TNQRT-----------DRY-G-GSL-E--NRARLLLEVTD 211 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTS-------HHHHHHSTT-TCCCC-----------STT-S-SSH-H--HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCcc-------HHHhhcCCc-ccccc-----------CCC-C-Cch-h--hHHHHHHHHHH
Confidence 34567788899999999986622 112221121 01000 000 0 011 1 12346779999
Q ss_pred HHHhhcC-CCEEEEEccC-----------HHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCc
Q 017434 222 WLQTITS-LPILVKGVLT-----------AED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 222 ~ir~~~~-~pv~vK~v~~-----------~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 285 (371)
.+|+.++ .||.+|+... .++ ++.+.++|+|+|.+++.. .++ ..+..+++.+ ++|
T Consensus 212 aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iP 281 (362)
T 4ab4_A 212 AAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-----ADD---SIGPLIKEAF--GGP 281 (362)
T ss_dssp HHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-----CTT---CCHHHHHHHH--CSC
T ss_pred HHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-----CCH---HHHHHHHHHC--CCC
Confidence 9999984 3999998632 223 677889999999998643 112 3466777777 689
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 286 VFLDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
||++||| +++++.++|+.| ||+|++||+++.
T Consensus 282 vi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 282 YIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp EEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred EEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 9999999 999999999998 999999999985
No 66
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.28 E-value=2.5e-10 Score=103.67 Aligned_cols=97 Identities=22% Similarity=0.255 Sum_probs=79.5
Q ss_pred HHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC--CCC--ccchHHHHHHHHHHhcCCCcEEEecC
Q 017434 217 WKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ--LDY--VPATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 217 ~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~--~~~--~~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
.+.++++++.+ +.+++ ..+.++++++.+.++|+|+|.++++|.+. .+. ..+.++.+.++++.+ ++||+++||
T Consensus 107 ~~~i~~~~~~~~~~~v~-~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GG 183 (223)
T 1y0e_A 107 DELVSYIRTHAPNVEIM-ADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGN 183 (223)
T ss_dssp HHHHHHHHHHCTTSEEE-EECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESS
T ss_pred HHHHHHHHHhCCCceEE-ecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecC
Confidence 46789999887 45554 46678999999999999999887765432 122 345677888888877 799999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
|++++|+.+++++|||+|++||+++
T Consensus 184 I~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 184 VITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEEChHHc
Confidence 9999999999999999999999865
No 67
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.21 E-value=2.4e-09 Score=100.09 Aligned_cols=199 Identities=14% Similarity=0.122 Sum_probs=116.7
Q ss_pred ceeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEE-ecC-CC---CCCHHHHhccCC---CceEEEEeecC
Q 017434 65 TTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMT-LSS-WA---TSSVEEVSSTGP---GIRFFQLYVTK 136 (371)
Q Consensus 65 s~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~-~s~-~~---~~~~eei~~~~~---~~~~~QLy~~~ 136 (371)
.++|.|+++++|++++.-+. |+.+. +.++..+.|+.++ ++- .+ ..+++++.+..+ .+...+.....
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~-----p~~~~-~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~ 76 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKY-----PSFDI-QKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGAS 76 (264)
T ss_dssp CEEETTEEESCCEEEECSCS-----SCHHH-HHHHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCS
T ss_pred CeEECCEEecCCCEEEecCC-----CCHHH-HHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccC
Confidence 47899999999999998543 43333 3467777787655 331 11 123344433322 22223332224
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.....++.++++|...+ ++++.... .|. ...-.
T Consensus 77 ~~~~~~~f~~~a~~agg~~~-i~l~i~~d------------~~~-------------------------------~~~e~ 112 (264)
T 1xm3_A 77 TAEEAVRIARLAKASGLCDM-IKVEVIGC------------SRS-------------------------------LLPDP 112 (264)
T ss_dssp SHHHHHHHHHHHHHTTCCSS-EEECCBCC------------TTT-------------------------------CCBCH
T ss_pred CHHHHHHHHHHHHHcCCCCe-EEEeecCC------------Ccc-------------------------------cccch
Confidence 45544456677777643222 22222100 000 00011
Q ss_pred HHHHHHHHhhc--CCCEEEEEccCHHHHHHHHHhCCCEEEEeCC-CCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 217 WKDVKWLQTIT--SLPILVKGVLTAEDASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
.+.++..++.+ ++.++.-...+.+.++++.+.|+|+|...+. -|.. .+....+.+..+++.. ++||++.|||+
T Consensus 113 ~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~ 188 (264)
T 1xm3_A 113 VETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIG 188 (264)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCC
T ss_pred HHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCC
Confidence 24455555543 5555544456788999999999999943221 1211 1233466788887754 79999999999
Q ss_pred CHHHHHHHHHcCCCEEEEchhHHH
Q 017434 294 RGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+++|+.+++++|||+|.+|++++.
T Consensus 189 t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 189 SPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CHHHHHHHHHcCCCEEEEcHHHhC
Confidence 999999999999999999999875
No 68
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.18 E-value=4.4e-10 Score=102.73 Aligned_cols=94 Identities=23% Similarity=0.260 Sum_probs=76.0
Q ss_pred CHHHHHHHHhhcCCCEEEEEc-----cCHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTITSLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v-----~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
..++++.+++.++ |+++|.+ .+.++ ++.+.++|+|+|.++. |. ..+..+++.++.+++.+++++||
T Consensus 104 ~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst-g~---~~gga~~~~i~~v~~~v~~~ipV 178 (225)
T 1mzh_A 104 VVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST-GF---APRGTTLEEVRLIKSSAKGRIKV 178 (225)
T ss_dssp HHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC-SC---SSSCCCHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC-CC---CCCCCCHHHHHHHHHHhCCCCcE
Confidence 4567999999888 9999994 34433 7888999999996543 22 13346788899998888668999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchh
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGRP 314 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr~ 314 (371)
+++|||++++|+.+++++|||.|++++.
T Consensus 179 ia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 179 KASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred EEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 9999999999999999999998888774
No 69
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.04 E-value=7.6e-09 Score=94.56 Aligned_cols=170 Identities=15% Similarity=0.154 Sum_probs=110.3
Q ss_pred HHHHHHHHHcCCcEEecCCCCCCHHHHhccCCCceEEEEeecC--Ch----HHHHHHHHHHHHcCCcEEEEecCCCCCcc
Q 017434 94 CATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTK--HR----NVDAQLVKRAERAGFKAIALTVDTPRLGR 167 (371)
Q Consensus 94 ~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~--d~----~~~~~~~~~a~~aG~~al~vtvd~p~~g~ 167 (371)
..+++++.+.|+..+.-. +...++++++..+-|+ +-+.... +. +...+.++.+.++|++.+.+....-
T Consensus 39 ~~~a~~~~~~G~~~i~~~-~~~~i~~i~~~~~~p~-i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~---- 112 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRAN-SVRDIKEIQAITDLPI-IGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKR---- 112 (234)
T ss_dssp HHHHHHHHHHTCSEEEEE-SHHHHHHHHTTCCSCE-EEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSS----
T ss_pred HHHHHHHHHCCCcEeecC-CHHHHHHHHHhCCCCE-EeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEccccc----
Confidence 589999999998765321 1122445554443333 2211000 00 0123456777889999886653210
Q ss_pred hhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc--CCCHHHHHHHHhhc-CCCEEEEEccCHHHHHH
Q 017434 168 READIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR--SLNWKDVKWLQTIT-SLPILVKGVLTAEDASL 244 (371)
Q Consensus 168 r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~ 244 (371)
.++ ....+.++.+++.+ +.++++ .+.++++++.
T Consensus 113 -------------------------------------------~~~~~~~~~~~i~~i~~~~~~~~v~~-~~~t~~ea~~ 148 (234)
T 1yxy_A 113 -------------------------------------------DRHDGLDIASFIRQVKEKYPNQLLMA-DISTFDEGLV 148 (234)
T ss_dssp -------------------------------------------CCTTCCCHHHHHHHHHHHCTTCEEEE-ECSSHHHHHH
T ss_pred -------------------------------------------CCCCCccHHHHHHHHHHhCCCCeEEE-eCCCHHHHHH
Confidence 001 12356788888877 566554 4578899999
Q ss_pred HHHhCCCEE--EEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 245 AIQYGAAGI--IVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 245 a~~~Gad~I--~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+.++|+|+| .+++.........++.++.+.++++. ++||+++|||++.+|+.+++++|||+|++||+++
T Consensus 149 a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 149 AHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA---GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp HHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred HHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 999999999 45432111111224467778877764 6999999999999999999999999999999876
No 70
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.01 E-value=3.3e-09 Score=121.88 Aligned_cols=199 Identities=13% Similarity=0.102 Sum_probs=127.2
Q ss_pred eeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHH-------hccCC--CceEEEEeecC
Q 017434 66 TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV-------SSTGP--GIRFFQLYVTK 136 (371)
Q Consensus 66 ~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei-------~~~~~--~~~~~QLy~~~ 136 (371)
|+++|+ .||+.+||+... .+..++.|+.++|....+......+.+++ ++..+ .++.+++....
T Consensus 584 t~llg~---~PIi~~gM~~~~-----~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~ 655 (2051)
T 2uv8_G 584 SKLIGR---PPLLVPGMTPCT-----VSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVN 655 (2051)
T ss_dssp HHHHSS---CSEEECCCHHHH-----TCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTC
T ss_pred HHhhCc---cceecCCCcccc-----ccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 446883 699999997332 14579999999999989854444444433 22222 57777764332
Q ss_pred Ch--HHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 137 HR--NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 137 d~--~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
.. ....++++.+.+.|+..-.+++.. + +|
T Consensus 656 ~~~~~~~~~~~~~~~~~gv~i~~v~~~a--------------g----------------------------------~p- 686 (2051)
T 2uv8_G 656 PFMLQWGIPLIKELRSKGYPIQFLTIGA--------------G----------------------------------VP- 686 (2051)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEEEES--------------S----------------------------------CC-
T ss_pred hhhhhhhHHHHHHHHHcCCCcceEEecC--------------C----------------------------------CC-
Confidence 21 122377888888998873333210 0 11
Q ss_pred CCHHH-HHHHHhhcCCCEEEEEccC---HHHHHHHHHhCCCEE-EEe--CC--CCcC--CCCccchHHHHHHHHHHhcCC
Q 017434 215 LNWKD-VKWLQTITSLPILVKGVLT---AEDASLAIQYGAAGI-IVS--NH--GARQ--LDYVPATVMALEEVVQAAKGR 283 (371)
Q Consensus 215 ~~~~~-i~~ir~~~~~pv~vK~v~~---~e~a~~a~~~Gad~I-~vs--~~--gg~~--~~~~~~~~~~l~~i~~~~~~~ 283 (371)
.++. ++.+ +..+++++.....+ ...+..+.++|+|++ ++. +. ||+. .|...+.+..++++++++ +
T Consensus 687 -~~~~~~~~i-~~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~--~ 762 (2051)
T 2uv8_G 687 -SLEVASEYI-ETLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP--N 762 (2051)
T ss_dssp -CHHHHHHHH-HHSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT--T
T ss_pred -chhhHHHHH-HHcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC--C
Confidence 1121 2223 22388877644333 344677888899993 333 32 3431 122344556788888877 8
Q ss_pred CcEEEecCCCCHHHHHHHH-----------HcCCCEEEEchhHHHhhhcCChH
Q 017434 284 VPVFLDGGVRRGTDVFKAL-----------ALGASGVFVGRPVPFSLAVDGEA 325 (371)
Q Consensus 284 i~via~GGI~~~~dv~kal-----------~lGAd~V~iGr~~l~~~~~~G~~ 325 (371)
||||+.|||.++.++..+| ++|||+|+||+.|+.+..+.-.+
T Consensus 763 ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~ 815 (2051)
T 2uv8_G 763 IMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSP 815 (2051)
T ss_dssp BCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCH
T ss_pred ceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccccCH
Confidence 9999999999999999999 89999999999998765443333
No 71
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.95 E-value=2.3e-09 Score=101.73 Aligned_cols=121 Identities=22% Similarity=0.213 Sum_probs=89.5
Q ss_pred CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCC-----------------------cCCC-------CccchHHHHHHHH
Q 017434 228 SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGA-----------------------RQLD-------YVPATVMALEEVV 277 (371)
Q Consensus 228 ~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg-----------------------~~~~-------~~~~~~~~l~~i~ 277 (371)
++++++. +.+++++..+.++|+|+|.+.+..+ .... ..++.++.+.+++
T Consensus 125 ~i~l~~~-v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~ 203 (297)
T 2zbt_A 125 KVPFVCG-ARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVH 203 (297)
T ss_dssp SSCEEEE-ESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHH
T ss_pred CceEEee-cCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHH
Confidence 5777754 4688999999999999998853100 0000 0123456677777
Q ss_pred HHhcCCCcEE--EecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcc
Q 017434 278 QAAKGRVPVF--LDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITR 355 (371)
Q Consensus 278 ~~~~~~i~vi--a~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~ 355 (371)
+.. ++|++ ++|||++++|+.+++.+|||+|++|+.++.+ .. ....++.+++.++.++...++.+++++++
T Consensus 204 ~~~--~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~---~d---p~~~~~~l~~~i~~~~~~~~~~~~~~~~g 275 (297)
T 2zbt_A 204 DHG--RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS---GD---PRKRARAIVRAVAHYNDPEVLAEVSEDLG 275 (297)
T ss_dssp HHS--SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS---SC---HHHHHHHHHHHHHTTTCHHHHHHHHTTCC
T ss_pred Hhc--CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC---CC---HHHHHHHHHHHHHHHhchHhhhHHHHhcC
Confidence 765 68888 9999999999999999999999999998742 12 34567777888887777777778888876
Q ss_pred cc
Q 017434 356 NH 357 (371)
Q Consensus 356 ~~ 357 (371)
..
T Consensus 276 ~~ 277 (297)
T 2zbt_A 276 EP 277 (297)
T ss_dssp CC
T ss_pred ce
Confidence 55
No 72
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.93 E-value=7e-09 Score=101.83 Aligned_cols=146 Identities=10% Similarity=-0.058 Sum_probs=96.8
Q ss_pred HHHHHHH-HcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 143 QLVKRAE-RAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 143 ~~~~~a~-~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
+.+++|+ ++||++|.|+..|... -+.|-.|.. +.+. .... |.... . ....+..+.++
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GYL-------l~QFlsp~~-N~R~----------~D~y-GG~sl-e--nR~r~~~eiv~ 235 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGYL-------LDAFFRESS-NKRQ----------SGPY-AGTTI-D--TRCQLIYDVTK 235 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTSH-------HHHHHSTTT-CCCC----------SSTT-CTTSH-H--HHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCcCchH-------HhhccCCCC-Cccc----------cCCC-CccCh-h--hhHHHHHHHHH
Confidence 4456788 8999999999876431 223322320 1000 0000 00001 1 12346778999
Q ss_pred HHHhhcC-CCEEEEEccC-----------HH----HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCc
Q 017434 222 WLQTITS-LPILVKGVLT-----------AE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 222 ~ir~~~~-~pv~vK~v~~-----------~e----~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 285 (371)
.+|+.++ .||.+|+... .+ .++.+.++|+|+|.+++.+... ...+ .+ +.++++.+ ++|
T Consensus 236 aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~-~~-~~~ir~~~--~iP 309 (379)
T 3aty_A 236 SVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIG-DV-VAWVRGSY--SGV 309 (379)
T ss_dssp HHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCC-CH-HHHHHTTC--CSC
T ss_pred HHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCcc-HH-HHHHHHHC--CCc
Confidence 9999985 4899998642 22 3677889999999998743111 0111 24 67777766 789
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 286 VFLDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
||++||| +++++.++|+.| ||+|++||+++.
T Consensus 310 vi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 310 KISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp EEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred EEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 9999999 999999999998 999999999986
No 73
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.91 E-value=3.3e-08 Score=88.41 Aligned_cols=167 Identities=12% Similarity=0.019 Sum_probs=93.6
Q ss_pred eEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHh
Q 017434 128 RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYV 207 (371)
Q Consensus 128 ~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (371)
...-+. ..+.+...++++.+.+.|++.+.+++.+|..-.-.+.+|..++-...+....+.. ........
T Consensus 12 ~i~~~~-~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~----------~~~~~~a~ 80 (205)
T 1wa3_A 12 IVAVLR-ANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTS----------VEQCRKAV 80 (205)
T ss_dssp EEEEEC-CSSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCS----------HHHHHHHH
T ss_pred EEEEEe-cCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCC----------HHHHHHHH
Confidence 333343 4678888899999999999999998877642111233333221000000000000 00000000
Q ss_pred hhhcccCCC--HHHHHHHH---hhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC
Q 017434 208 ANQIDRSLN--WKDVKWLQ---TITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 282 (371)
Q Consensus 208 ~~~~~~~~~--~~~i~~ir---~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~ 282 (371)
.. ..++. ...-..+. +..++|++. ++.+++++..+.++|+|.|.+... ....++.+.++++.++
T Consensus 81 ~~--Gad~iv~~~~~~~~~~~~~~~g~~vi~-g~~t~~e~~~a~~~Gad~vk~~~~-------~~~g~~~~~~l~~~~~- 149 (205)
T 1wa3_A 81 ES--GAEFIVSPHLDEEISQFCKEKGVFYMP-GVMTPTELVKAMKLGHTILKLFPG-------EVVGPQFVKAMKGPFP- 149 (205)
T ss_dssp HH--TCSEEECSSCCHHHHHHHHHHTCEEEC-EECSHHHHHHHHHTTCCEEEETTH-------HHHHHHHHHHHHTTCT-
T ss_pred Hc--CCCEEEcCCCCHHHHHHHHHcCCcEEC-CcCCHHHHHHHHHcCCCEEEEcCc-------cccCHHHHHHHHHhCC-
Confidence 00 01111 01111111 123455554 445677777778888887776321 0123455666665543
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 283 RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 283 ~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
++||+++|||. .+++.+++.+|||+|.+|+.++.
T Consensus 150 ~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 150 NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 79999999996 78999999999999999998874
No 74
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.91 E-value=3.2e-09 Score=101.30 Aligned_cols=120 Identities=23% Similarity=0.266 Sum_probs=78.8
Q ss_pred cCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc-----------------------CCCC-------ccchHHHHHHH
Q 017434 227 TSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR-----------------------QLDY-------VPATVMALEEV 276 (371)
Q Consensus 227 ~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~-----------------------~~~~-------~~~~~~~l~~i 276 (371)
++.|+++ .+.+.+++.++.+.|+|+|.+.+..|+ ..+. .+..++.+.++
T Consensus 124 ~g~~v~~-~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i 202 (305)
T 2nv1_A 124 YTVPFVC-GCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQI 202 (305)
T ss_dssp CSSCEEE-EESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHH
T ss_pred cCCcEEE-EeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHH
Confidence 3555553 445667777777778887777432110 0000 22356677777
Q ss_pred HHHhcCCCcEE--EecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhc
Q 017434 277 VQAAKGRVPVF--LDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEIT 354 (371)
Q Consensus 277 ~~~~~~~i~vi--a~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~ 354 (371)
++.. ++||+ ++|||++++|+.+++.+|||+|++||.++.. ..+ ...++.+++.+..++...++.+++++.
T Consensus 203 ~~~~--~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~---~~p---~~~~~~l~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 2nv1_A 203 KKDG--KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS---DNP---AKFAKAIVEATTHFTDYKLIAELSKEL 274 (305)
T ss_dssp HHHT--SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS---SCH---HHHHHHHHHHHHTTTCHHHHHHHTSCC
T ss_pred HHhc--CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC---CCH---HHHHHHHHHHHHHhcChhhHHHHHHHh
Confidence 7765 78998 9999999999999999999999999998853 122 235566666666665555555555554
Q ss_pred c
Q 017434 355 R 355 (371)
Q Consensus 355 ~ 355 (371)
+
T Consensus 275 g 275 (305)
T 2nv1_A 275 G 275 (305)
T ss_dssp -
T ss_pred h
Confidence 4
No 75
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.90 E-value=7.8e-08 Score=89.49 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhc-CChHHHHHHHHHHHHHHHH
Q 017434 269 TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV-DGEAGVRKVLQMLRDEFEL 340 (371)
Q Consensus 269 ~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~-~G~~gv~~~l~~l~~el~~ 340 (371)
..+.+.++++.. ++||++.|||++++++.+++.+|||+|.+|+.++..... ..++...+.+..+.++|+.
T Consensus 189 ~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 189 VESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp HHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhccChhHHHHHHHHHHHHHHH
Confidence 345677777765 799999999999999999999999999999999876532 2223222344555555543
No 76
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.87 E-value=3.6e-08 Score=91.32 Aligned_cols=87 Identities=30% Similarity=0.435 Sum_probs=61.8
Q ss_pred CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC---------------------C-C---------CccchHHHHHHH
Q 017434 228 SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ---------------------L-D---------YVPATVMALEEV 276 (371)
Q Consensus 228 ~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~---------------------~-~---------~~~~~~~~l~~i 276 (371)
+.|++ -++.+.++|.++++.|+|.|-..+..|+. + + .-.++++.+.++
T Consensus 115 ~vpfv-~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~I 193 (291)
T 3o07_A 115 KVPFV-CGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDV 193 (291)
T ss_dssp SSCEE-EEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCcEE-eeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHH
Confidence 45554 34556677777777777777664332210 1 0 012467888888
Q ss_pred HHHhcCCCcE--EEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 277 VQAAKGRVPV--FLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 277 ~~~~~~~i~v--ia~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
++.. ++|| |++|||.|++|+.+++.+|||+|++||.++.
T Consensus 194 ke~~--~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 194 LEKG--KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp HHHT--SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred HHcc--CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 8875 6888 5689999999999999999999999998875
No 77
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.86 E-value=6.2e-08 Score=90.64 Aligned_cols=154 Identities=14% Similarity=0.132 Sum_probs=98.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.+.+.++..+++|+++|.+ |.|.. -|.. .-..+ .+.....+.........
T Consensus 29 ~~~~~~~~~~~l~~~GaD~iei--g~P~s------------dp~~-DG~~i------------~~a~~~al~~G~~~~~~ 81 (268)
T 1qop_A 29 GIEQSLKIIDTLIDAGADALEL--GVPFS------------DPLA-DGPTI------------QNANLRAFAAGVTPAQC 81 (268)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEE--ECCCS------------CCTT-CCHHH------------HHHHHHHHHTTCCHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEE--CCCCC------------CccC-CCHHH------------HHHHHHHHHcCCCHHHH
Confidence 3377888999999999999987 44432 0100 00000 00001111111111224
Q ss_pred HHHHHHHHhh-cCCCEEEEEccC-------HHHHHHHHHhCCCEEEEeC---------------CCCc---------C--
Q 017434 217 WKDVKWLQTI-TSLPILVKGVLT-------AEDASLAIQYGAAGIIVSN---------------HGAR---------Q-- 262 (371)
Q Consensus 217 ~~~i~~ir~~-~~~pv~vK~v~~-------~e~a~~a~~~Gad~I~vs~---------------~gg~---------~-- 262 (371)
.+.++++|+. .++|+++=.-.+ .+.++.+.++|+|+|++.. ||-. .
T Consensus 82 ~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~ 161 (268)
T 1qop_A 82 FEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDD 161 (268)
T ss_dssp HHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHH
T ss_pred HHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHH
Confidence 5789999998 799987622112 3568889999999999842 1100 0
Q ss_pred -----------------C--CCc------cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 263 -----------------L--DYV------PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 263 -----------------~--~~~------~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
. .+| ++..+.+.++++.. ++||+++|||++++++.+++..|||+|.+|+.++.
T Consensus 162 ~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 162 LLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp HHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 0 011 11256777777765 79999999999999999999999999999999987
Q ss_pred hh
Q 017434 318 SL 319 (371)
Q Consensus 318 ~~ 319 (371)
..
T Consensus 240 ~~ 241 (268)
T 1qop_A 240 II 241 (268)
T ss_dssp HH
T ss_pred hH
Confidence 64
No 78
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.86 E-value=7e-08 Score=90.35 Aligned_cols=157 Identities=15% Similarity=0.163 Sum_probs=101.0
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+.+.+.++++..+++|++.|.+.+ |.. -|. . +...+ ..+....+.......
T Consensus 30 dP~~~~~~~~~~~l~~~GaD~iElGi--PfS------------DP~--a-------DGpvI----q~a~~rAL~~G~~~~ 82 (271)
T 3nav_A 30 DPNPEQSLAIMQTLIDAGADALELGM--PFS------------DPL--A-------DGPTI----QGANLRALAAKTTPD 82 (271)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEEC--CCC------------CGG--G-------CCSHH----HHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECC--CCC------------CCC--C-------CCHHH----HHHHHHHHHcCCCHH
Confidence 34567889999999999999998753 432 110 0 00000 001111222111222
Q ss_pred CCHHHHHHHHhh-cCCCEEEEEccC-------HHHHHHHHHhCCCEEEEeC---------------CCCc--------C-
Q 017434 215 LNWKDVKWLQTI-TSLPILVKGVLT-------AEDASLAIQYGAAGIIVSN---------------HGAR--------Q- 262 (371)
Q Consensus 215 ~~~~~i~~ir~~-~~~pv~vK~v~~-------~e~a~~a~~~Gad~I~vs~---------------~gg~--------~- 262 (371)
..++.++++|+. .++|+++-+-.+ ...++.+.++|+|++++.. ||-. .
T Consensus 83 ~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~ 162 (271)
T 3nav_A 83 ICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTAS 162 (271)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 346789999987 689999865322 2358899999999988842 1100 0
Q ss_pred --------------CC-------Ccc-----c-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 263 --------------LD-------YVP-----A-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 263 --------------~~-------~~~-----~-~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
.+ .|. . ..+.+.++++.. ++||++.+||++++++.+++..|||+|.+|+++
T Consensus 163 ~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAi 240 (271)
T 3nav_A 163 DETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISGSAV 240 (271)
T ss_dssp HHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 00 111 1 234567776655 799999999999999999999999999999999
Q ss_pred HHhhh
Q 017434 316 PFSLA 320 (371)
Q Consensus 316 l~~~~ 320 (371)
+..+.
T Consensus 241 v~~i~ 245 (271)
T 3nav_A 241 VKIIE 245 (271)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 79
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.86 E-value=5.1e-08 Score=91.27 Aligned_cols=162 Identities=16% Similarity=0.160 Sum_probs=98.6
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhh---hhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC-C-
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIK---NRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL-N- 216 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 216 (371)
.++++..+++|+.+|-+-.|...++....+++ ....+|- ..+.+- .+ ..+ ..+.....-|.-+ .
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPV--l~Kdfi-~d-------~~q-i~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPA--LRKDFL-FD-------PYQ-VYEARSWGADCILIIM 150 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCE--EEESCC-CS-------THH-HHHHHHTTCSEEEEET
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCE--EECCcc-CC-------HHH-HHHHHHcCCCEEEEcc
Confidence 35777888999999987667666654554443 2233341 111110 00 000 0011110112212 1
Q ss_pred ----HHHHHHHHh---hcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017434 217 ----WKDVKWLQT---ITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 289 (371)
Q Consensus 217 ----~~~i~~ir~---~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~ 289 (371)
.+.++.+.+ ..++-+++ .+-+.++++++.++|+|.|-+.|...+. -...++...++.+.++.++|+++.
T Consensus 151 a~L~~~~l~~l~~~a~~lGl~~lv-evh~~eEl~~A~~~ga~iIGinnr~l~t---~~~dl~~~~~L~~~ip~~~~vIae 226 (272)
T 3tsm_A 151 ASVDDDLAKELEDTAFALGMDALI-EVHDEAEMERALKLSSRLLGVNNRNLRS---FEVNLAVSERLAKMAPSDRLLVGE 226 (272)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEE-EECSHHHHHHHTTSCCSEEEEECBCTTT---CCBCTHHHHHHHHHSCTTSEEEEE
T ss_pred cccCHHHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHhcCCCEEEECCCCCcc---CCCChHHHHHHHHhCCCCCcEEEE
Confidence 123444432 23554443 3467788888888888888776654322 233456667777777767999999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 290 GGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 290 GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
|||++++|+.++..+||++|.||++++.+
T Consensus 227 sGI~t~edv~~l~~~Ga~gvLVG~almr~ 255 (272)
T 3tsm_A 227 SGIFTHEDCLRLEKSGIGTFLIGESLMRQ 255 (272)
T ss_dssp SSCCSHHHHHHHHTTTCCEEEECHHHHTS
T ss_pred CCCCCHHHHHHHHHcCCCEEEEcHHHcCC
Confidence 99999999999999999999999999864
No 80
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.85 E-value=5.2e-08 Score=89.18 Aligned_cols=97 Identities=24% Similarity=0.157 Sum_probs=73.4
Q ss_pred cCCCHHHHHHHHhhcCCCEEEEEc-----cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCC
Q 017434 213 RSLNWKDVKWLQTITSLPILVKGV-----LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGR 283 (371)
Q Consensus 213 ~~~~~~~i~~ir~~~~~pv~vK~v-----~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~ 283 (371)
.++..++|+.+++.++-. .+|.+ ++.++. +.+.++|+|+|..|+.-+ .+..+++.+..+++.++++
T Consensus 126 ~~~v~~eI~~v~~a~~~~-~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~----~ggAt~~dv~lmr~~vg~~ 200 (239)
T 3ngj_A 126 YDDVEKDVKAVVDASGKA-LTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG----THGATPEDVKLMKDTVGDK 200 (239)
T ss_dssp HHHHHHHHHHHHHHHTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHhcCC-ceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC----CCCCCHHHHHHHHHhhCCC
Confidence 334567788998888633 66765 455554 445899999999985311 2345667777777777778
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCCEEEEchh
Q 017434 284 VPVFLDGGVRRGTDVFKALALGASGVFVGRP 314 (371)
Q Consensus 284 i~via~GGI~~~~dv~kal~lGAd~V~iGr~ 314 (371)
++|.++||||+.+|+++++++||+.++..+.
T Consensus 201 v~VKasGGIrt~~da~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 201 ALVKAAGGIRTFDDAMKMINNGASRIGASAG 231 (239)
T ss_dssp SEEEEESSCCSHHHHHHHHHTTEEEEEESCH
T ss_pred ceEEEeCCCCCHHHHHHHHHhcccceecccH
Confidence 9999999999999999999999998877653
No 81
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.84 E-value=3.1e-08 Score=91.17 Aligned_cols=120 Identities=23% Similarity=0.233 Sum_probs=85.2
Q ss_pred CHHHHHHHHhhcCCCEEEEEccC-------HHHHHHHHHhCCCEEEEeCC---------------CCc--------C---
Q 017434 216 NWKDVKWLQTITSLPILVKGVLT-------AEDASLAIQYGAAGIIVSNH---------------GAR--------Q--- 262 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~-------~e~a~~a~~~Gad~I~vs~~---------------gg~--------~--- 262 (371)
..+.++++|+.+++|+.+.+..+ .+.++.+.++|+|+|++..- |-. .
T Consensus 68 ~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e 147 (248)
T 1geq_A 68 AFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDE 147 (248)
T ss_dssp HHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHH
T ss_pred HHHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHH
Confidence 46789999999899998877434 36789999999999998631 100 0
Q ss_pred --------CC---------C--c------cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 263 --------LD---------Y--V------PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 263 --------~~---------~--~------~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+ + + +..++.+.++++.. ++||+++|||++++|+.+++.+|||+|.+|+.++.
T Consensus 148 ~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~ 225 (248)
T 1geq_A 148 RLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVK 225 (248)
T ss_dssp HHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 01 0 1 11345677777766 69999999999999999999999999999999886
Q ss_pred hhhcCChHHHHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLRDEF 338 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~~el 338 (371)
....+. +.++++++.+++.|
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 226 IIGEKG-REATEFLKKKVEEL 245 (248)
T ss_dssp HHHHHG-GGCHHHHHHHHHHH
T ss_pred hHhhCh-HHHHHHHHHHHHHh
Confidence 532111 34455555554444
No 82
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.83 E-value=1.1e-07 Score=88.79 Aligned_cols=153 Identities=16% Similarity=0.173 Sum_probs=99.4
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCC--ccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP--HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
|.+.+.+.++..+++|++.|.+. .|.. -|. +.... ......+.......
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElg--iPfS------------DP~aDGp~Iq---------------~a~~~AL~~G~~~~ 80 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELG--FPFS------------DPLADGPVIQ---------------GANLRSLAAGTTSS 80 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEE--CCCS------------CCTTCCHHHH---------------HHHHHHHHTTCCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--CCCC------------CCCCCCHHHH---------------HHHHHHHHcCCCHH
Confidence 44889999999999999998764 3432 121 00000 00111111111122
Q ss_pred CCHHHHHHHHhh-cCCCEEEEEccC-------HHHHHHHHHhCCCEEEEeC---------------CCCc---------C
Q 017434 215 LNWKDVKWLQTI-TSLPILVKGVLT-------AEDASLAIQYGAAGIIVSN---------------HGAR---------Q 262 (371)
Q Consensus 215 ~~~~~i~~ir~~-~~~pv~vK~v~~-------~e~a~~a~~~Gad~I~vs~---------------~gg~---------~ 262 (371)
..++.++++|+. .++|+++-+-.+ ...++.+.++|+|++.+.. +|-. .
T Consensus 81 ~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~ 160 (267)
T 3vnd_A 81 DCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNAD 160 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCC
Confidence 346789999988 789998865433 2348899999999998842 1100 0
Q ss_pred -------------------CC--Ccc------chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 263 -------------------LD--YVP------ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 263 -------------------~~--~~~------~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
.. .|. ...+.+.++++.. ++||++.|||++++++.+++..|||+|.+|+++
T Consensus 161 ~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 161 ADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp HHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 00 111 1234566666554 799999999999999999999999999999999
Q ss_pred HHhhh
Q 017434 316 PFSLA 320 (371)
Q Consensus 316 l~~~~ 320 (371)
+..+.
T Consensus 239 v~~i~ 243 (267)
T 3vnd_A 239 VKIIE 243 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 83
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.82 E-value=1.9e-08 Score=91.97 Aligned_cols=169 Identities=13% Similarity=0.095 Sum_probs=113.1
Q ss_pred EEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCC-ccccccccccccCCCCCCCcchhhhHhh
Q 017434 130 FQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASYVA 208 (371)
Q Consensus 130 ~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (371)
+-+....|.+...++++.+.+.|++.+.+|+.+|..-.-.+.++..+ |. .+...++... .........|+...+
T Consensus 37 v~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~--~~~~iGaGTVlt~--~~a~~Ai~AGA~fIv- 111 (232)
T 4e38_A 37 IPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ--PEMLIGAGTILNG--EQALAAKEAGATFVV- 111 (232)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TTCEEEEECCCSH--HHHHHHHHHTCSEEE-
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC--CCCEEeECCcCCH--HHHHHHHHcCCCEEE-
Confidence 33444578888888999999999999999999887545555666555 32 1111111100 000000011111122
Q ss_pred hhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 209 NQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 209 ~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
-|.++.+.++..++ .++|++. ++.|+.++.++.++|+|.|.++-.. .. + ..+.|+.++..++ ++|+++
T Consensus 112 ---sP~~~~~vi~~~~~-~gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa~--~~-g---G~~~lkal~~p~p-~ip~~p 179 (232)
T 4e38_A 112 ---SPGFNPNTVRACQE-IGIDIVP-GVNNPSTVEAALEMGLTTLKFFPAE--AS-G---GISMVKSLVGPYG-DIRLMP 179 (232)
T ss_dssp ---CSSCCHHHHHHHHH-HTCEEEC-EECSHHHHHHHHHTTCCEEEECSTT--TT-T---HHHHHHHHHTTCT-TCEEEE
T ss_pred ---eCCCCHHHHHHHHH-cCCCEEc-CCCCHHHHHHHHHcCCCEEEECcCc--cc-c---CHHHHHHHHHHhc-CCCeee
Confidence 25567677777655 4888774 6789999999999999999995421 00 1 3467777766654 799999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 289 DGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
.|||. .+++.+++++||.++.+|+.+.
T Consensus 180 tGGI~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 180 TGGIT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp BSSCC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred EcCCC-HHHHHHHHHCCCeEEEECchhc
Confidence 99995 8999999999999998888665
No 84
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.82 E-value=1.3e-07 Score=88.57 Aligned_cols=171 Identities=16% Similarity=0.155 Sum_probs=105.7
Q ss_pred HHHHHHHHcCCcEE-ecCCCCCCHHHHhccCC--CceEEE-E-ee--cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcc
Q 017434 95 ATARAASAAGTIMT-LSSWATSSVEEVSSTGP--GIRFFQ-L-YV--TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGR 167 (371)
Q Consensus 95 ~~a~aa~~~G~~~~-~s~~~~~~~eei~~~~~--~~~~~Q-L-y~--~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~ 167 (371)
.+.+.|.+.|+..+ +. ..-+....+... +....= + |+ ....+.-...++.|.+.|++.|++-+|.-
T Consensus 78 ~lc~eA~~~g~aaVCV~---P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig---- 150 (288)
T 3oa3_A 78 VLCAEAKEYGFATVCVR---PDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYP---- 150 (288)
T ss_dssp HHHHHHHHHTCSEEEEC---GGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHH----
T ss_pred HHHHHHHhcCCcEEEEC---HHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehh----
Confidence 77888888997644 42 122332222211 111110 1 22 12334445566778889999998766420
Q ss_pred hhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-----cCHHH-
Q 017434 168 READIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-----LTAED- 241 (371)
Q Consensus 168 r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-----~~~e~- 241 (371)
.+. ..+.....++|+.+++.++-| .+|.+ ++.++
T Consensus 151 -------------------------------------~lk--~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei 190 (288)
T 3oa3_A 151 -------------------------------------WLS--EKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEI 190 (288)
T ss_dssp -------------------------------------HHH--TTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHH
T ss_pred -------------------------------------hhc--CCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHH
Confidence 000 022334567899999988777 47876 45565
Q ss_pred ---HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 242 ---ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 242 ---a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
++.+.++|+|+|..|..-+. ....+..+..+.++.+..+++++|.++||||+.+|+++++++||+.++..+
T Consensus 191 ~~A~~ia~eaGADfVKTSTGf~~-~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 191 IAGCVLSSLAGADYVKTSTGFNG-PGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp HHHHHHHHHTTCSEEECCCSSSS-CCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred HHHHHHHHHcCCCEEEcCCCCCC-CCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 67788999999999842111 001123444444444433568999999999999999999999999776665
No 85
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.81 E-value=9.8e-07 Score=81.11 Aligned_cols=86 Identities=19% Similarity=0.263 Sum_probs=69.7
Q ss_pred CCCEEEEEccCHHHHHHHHHhCCCEEEEeCC-CCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCC
Q 017434 228 SLPILVKGVLTAEDASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGA 306 (371)
Q Consensus 228 ~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGA 306 (371)
++.++.-...++..++++.++|++.|...+. -|+ ..+..+++.|..+++.. ++|||++|||.+++|+.+++++||
T Consensus 135 Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGs--G~Gi~~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGA 210 (265)
T 1wv2_A 135 GFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGS--GLGICNPYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGC 210 (265)
T ss_dssp TCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTC--CCCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTC
T ss_pred CCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCC--CCCcCCHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCC
Confidence 5555544568899999999999999977332 121 12445688889898865 799999999999999999999999
Q ss_pred CEEEEchhHHH
Q 017434 307 SGVFVGRPVPF 317 (371)
Q Consensus 307 d~V~iGr~~l~ 317 (371)
|+|++|+.+..
T Consensus 211 dgVlVgSAI~~ 221 (265)
T 1wv2_A 211 EAVLMNTAIAH 221 (265)
T ss_dssp SEEEESHHHHT
T ss_pred CEEEEChHHhC
Confidence 99999998874
No 86
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.80 E-value=2.2e-08 Score=118.98 Aligned_cols=212 Identities=16% Similarity=0.214 Sum_probs=131.6
Q ss_pred eeeccccCCC-CC--Cccc-eeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHH-----
Q 017434 50 LFRPRILRDV-SK--IDMT-TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV----- 120 (371)
Q Consensus 50 ~l~pr~l~~~-~~--~d~s-~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei----- 120 (371)
.|.|+..+.. .. .++. ++++| ..||+.+||++.. . ...|+.+..++|....++.....+.+++
T Consensus 402 ~f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-s----~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~ 473 (3089)
T 3zen_D 402 SYAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-V----DAKIVAAAANAGHWAELAGGGQVTEQIFNDRIA 473 (3089)
T ss_dssp GGCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-T----SHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHH
T ss_pred ccCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-C----CHHHHHHHHhCCCceeecCCCCCCHHHHHHHHH
Confidence 3667765422 22 2232 34567 6799999998543 1 3379999999999999965544444432
Q ss_pred --hccC--CCceEEEEeecCChHH------HHHHHHHHHHcC--CcEEEEecCCCCCcchhHHhhhhcCCCCcccccccc
Q 017434 121 --SSTG--PGIRFFQLYVTKHRNV------DAQLVKRAERAG--FKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYE 188 (371)
Q Consensus 121 --~~~~--~~~~~~QLy~~~d~~~------~~~~~~~a~~aG--~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~ 188 (371)
.+.. +.++.+++.. .++.. .+++++.+.+.| ++.++++.+.|..
T Consensus 474 ~~r~~~~~~~p~~vNl~~-~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~----------------------- 529 (3089)
T 3zen_D 474 ELETLLEPGRAIQFNTLF-LDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDL----------------------- 529 (3089)
T ss_dssp HHHHHSCTTCCCEEEEEC-SCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCH-----------------------
T ss_pred HHHHhcCCCCceeechhh-cChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCch-----------------------
Confidence 3333 2455555432 23322 147788888999 6667776554310
Q ss_pred ccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCC------EEEEeCC--CC
Q 017434 189 GLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAA------GIIVSNH--GA 260 (371)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad------~I~vs~~--gg 260 (371)
....+.++.+++. ++.++.=.+.+.++++++.+.|+| +|++.+. ||
T Consensus 530 -------------------------ee~~~~i~~l~~~-Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGG 583 (3089)
T 3zen_D 530 -------------------------EEAVDIIDELNEV-GISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGG 583 (3089)
T ss_dssp -------------------------HHHHHHHTSTTHH-HHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSE
T ss_pred -------------------------hHhHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCC
Confidence 0001223333322 334333135688999999999999 7777653 33
Q ss_pred cCCCCccchHHHHHHHHHHhc--CCCcEEEecCCCCHHHHHHHH-----------HcCCCEEEEchhHHHhhhc
Q 017434 261 RQLDYVPATVMALEEVVQAAK--GRVPVFLDGGVRRGTDVFKAL-----------ALGASGVFVGRPVPFSLAV 321 (371)
Q Consensus 261 ~~~~~~~~~~~~l~~i~~~~~--~~i~via~GGI~~~~dv~kal-----------~lGAd~V~iGr~~l~~~~~ 321 (371)
+.. .......+......+. .++||++.|||.+++++..++ ++|||+|++|+.|+....+
T Consensus 584 H~g--~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea 655 (3089)
T 3zen_D 584 HHS--WEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLEA 655 (3089)
T ss_dssp ECC--SCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTTS
T ss_pred CCC--cccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCccc
Confidence 321 1233444533333322 279999999999999999999 9999999999999976544
No 87
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.80 E-value=4.1e-08 Score=91.76 Aligned_cols=184 Identities=18% Similarity=0.153 Sum_probs=114.3
Q ss_pred cccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhccC--CCceEEEEeecCC----h--HHHH
Q 017434 71 FNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTG--PGIRFFQLYVTKH----R--NVDA 142 (371)
Q Consensus 71 ~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~~~--~~~~~~QLy~~~d----~--~~~~ 142 (371)
..+..|+.++||.... ++ ..+++++.+.|+..++.+.. .++.+.+.. ..+..+|+....+ . +...
T Consensus 30 ~~id~~~~l~p~~~~~--~~---~~~~~~~~~~g~~~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~ 102 (273)
T 2qjg_A 30 VPMDHGVSNGPIKGLI--DI---RKTVNDVAEGGANAVLLHKG--IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIV 102 (273)
T ss_dssp EECCHHHHHCSCTTSS--SH---HHHHHHHHHHTCSEEEECHH--HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEEC
T ss_pred EEcccccccCCCcchh--hH---HHHHHHHHhcCCCEEEeCHH--HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHH
Confidence 3456777788875432 11 27899999999988764320 011111111 1356667654321 1 1113
Q ss_pred HHHHHHHHcCCcEEE--EecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 143 QLVKRAERAGFKAIA--LTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 143 ~~~~~a~~aG~~al~--vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
+.++++.++|++.+. ++..++.. .+.+. ..+.+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~--------------------------------------~~~~~-------~~~~v 137 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDED--------------------------------------WEAYR-------DLGMI 137 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTH--------------------------------------HHHHH-------HHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCH--------------------------------------HHHHH-------HHHHH
Confidence 456778889999984 33322100 00000 11233
Q ss_pred HHHHhhcCCCEEEEEc---------cCH---HHH-HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 221 KWLQTITSLPILVKGV---------LTA---EDA-SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v---------~~~---e~a-~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.+.+++|+++... .+. +++ +.+.++|+|+|.++. +..++.+.++++.+ ++||+
T Consensus 138 ~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~--~ipvv 206 (273)
T 2qjg_A 138 AETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGC--PAPVV 206 (273)
T ss_dssp HHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhC--CCCEE
Confidence 3444446899988751 333 344 889999999999863 13567888888777 79999
Q ss_pred EecCCCC--HHH----HHHHHHcCCCEEEEchhHHH
Q 017434 288 LDGGVRR--GTD----VFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 288 a~GGI~~--~~d----v~kal~lGAd~V~iGr~~l~ 317 (371)
+.|||.+ .+| +.+++.+||++|.+||.++.
T Consensus 207 a~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 207 VAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp EECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHT
T ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhC
Confidence 9999995 778 55566799999999999875
No 88
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=98.80 E-value=1.4e-07 Score=91.82 Aligned_cols=100 Identities=13% Similarity=-0.035 Sum_probs=68.7
Q ss_pred CCHHHHHHHHhhcC-CCEEEEEccC-----------H----HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHH
Q 017434 215 LNWKDVKWLQTITS-LPILVKGVLT-----------A----EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQ 278 (371)
Q Consensus 215 ~~~~~i~~ir~~~~-~pv~vK~v~~-----------~----e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~ 278 (371)
|..|+++.+|+.++ -++.+|+..+ . +.++.+.+.|++.+.++...-...............+++
T Consensus 204 f~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~ 283 (358)
T 4a3u_A 204 LLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRK 283 (358)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHH
Confidence 56789999999883 5688887521 1 125667889999999975422111111111123345556
Q ss_pred HhcCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchhHHH
Q 017434 279 AAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPF 317 (371)
Q Consensus 279 ~~~~~i~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~ 317 (371)
.. ..||+ .||+.+++++.++|+.| ||.|++||+++.
T Consensus 284 ~~--~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 284 VF--KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIG 320 (358)
T ss_dssp HC--CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH
T ss_pred hc--CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh
Confidence 55 45555 58889999999999999 999999999985
No 89
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.79 E-value=5.5e-08 Score=87.43 Aligned_cols=192 Identities=13% Similarity=0.143 Sum_probs=112.2
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..|.+...+.++.+.+.|++.+.++...|..-...+.++..++.|..+....+...+ ........++. .+ .-+.
T Consensus 15 ~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~--~i~~a~~~Gad-~V---~~~~ 88 (212)
T 2v82_A 15 GITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPE--QVDALARMGCQ-LI---VTPN 88 (212)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHH--HHHHHHHTTCC-EE---ECSS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHH--HHHHHHHcCCC-EE---EeCC
Confidence 467777777888888888888887765543222223444434333212100000000 00000000000 00 0122
Q ss_pred CCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 215 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
...+.++.. +..+.++++. +.+++++..+.+.|+|+|.+... .+..++.+.++++.++.++||+++|||.
T Consensus 89 ~~~~~~~~~-~~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t-------~~~g~~~~~~l~~~~~~~ipvia~GGI~- 158 (212)
T 2v82_A 89 IHSEVIRRA-VGYGMTVCPG-CATATEAFTALEAGAQALKIFPS-------SAFGPQYIKALKAVLPSDIAVFAVGGVT- 158 (212)
T ss_dssp CCHHHHHHH-HHTTCEEECE-ECSHHHHHHHHHTTCSEEEETTH-------HHHCHHHHHHHHTTSCTTCEEEEESSCC-
T ss_pred CCHHHHHHH-HHcCCCEEee-cCCHHHHHHHHHCCCCEEEEecC-------CCCCHHHHHHHHHhccCCCeEEEeCCCC-
Confidence 334555444 4457776654 78899999999999999998321 1224566777766553259999999997
Q ss_pred HHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHH
Q 017434 295 GTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMAL 344 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~ 344 (371)
.+++.+++.+||++|.+|+.++.+. +..+...+.++.+++.++...++
T Consensus 159 ~~~i~~~~~~Ga~gv~vGsai~~~~--~~~~d~~~~~~~l~~~~~~~~~~ 206 (212)
T 2v82_A 159 PENLAQWIDAGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAVQL 206 (212)
T ss_dssp TTTHHHHHHHTCSEEEECTTTCCTT--CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEChHHhCCC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999886421 11234555666666666555543
No 90
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.78 E-value=8.6e-08 Score=89.88 Aligned_cols=89 Identities=24% Similarity=0.258 Sum_probs=70.6
Q ss_pred hcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC
Q 017434 226 ITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG 305 (371)
Q Consensus 226 ~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lG 305 (371)
.+++.+++ .+.+.++++++.++|+|.|.+.|.... .-...++.+.++.+.++.++|+++.|||++++|+.+++.+|
T Consensus 160 ~lGl~~lv-ev~t~ee~~~A~~~Gad~IGv~~r~l~---~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~G 235 (272)
T 3qja_A 160 SLGMTALV-EVHTEQEADRALKAGAKVIGVNARDLM---TLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAG 235 (272)
T ss_dssp HTTCEEEE-EESSHHHHHHHHHHTCSEEEEESBCTT---TCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTT
T ss_pred HCCCcEEE-EcCCHHHHHHHHHCCCCEEEECCCccc---ccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcC
Confidence 35777664 457899999999999999999764322 22334556667766665579999999999999999999999
Q ss_pred CCEEEEchhHHHh
Q 017434 306 ASGVFVGRPVPFS 318 (371)
Q Consensus 306 Ad~V~iGr~~l~~ 318 (371)
|++|.+|++++.+
T Consensus 236 adgvlVGsal~~a 248 (272)
T 3qja_A 236 ADAVLVGEGLVTS 248 (272)
T ss_dssp CSEEEECHHHHTC
T ss_pred CCEEEEcHHHhCC
Confidence 9999999999863
No 91
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.72 E-value=2.8e-07 Score=85.26 Aligned_cols=94 Identities=19% Similarity=0.160 Sum_probs=72.1
Q ss_pred CCHHHHHHHHhhcCCCEEEEEc-----cCHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCc
Q 017434 215 LNWKDVKWLQTITSLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v-----~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 285 (371)
...++|+.+++.++ ...+|.+ ++.++ ++.+.++|+|+|..|+.-+ .+.++++.+..+++.++++++
T Consensus 144 ~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~----~~GAT~edV~lm~~~vg~~v~ 218 (260)
T 3r12_A 144 YVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFG----TGGATAEDVHLMKWIVGDEMG 218 (260)
T ss_dssp HHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS----SCCCCHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCC----CCCCCHHHHHHHHHHhCCCce
Confidence 35577888888875 3346876 45544 4667899999999985311 234567777777777777899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 286 VFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
|-++||||+.+|+++++++||+.++..+
T Consensus 219 VKaAGGIrt~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 219 VKASGGIRTFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred EEEeCCCCCHHHHHHHHHcCCceeecch
Confidence 9999999999999999999999876655
No 92
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.71 E-value=9.3e-08 Score=90.88 Aligned_cols=45 Identities=40% Similarity=0.585 Sum_probs=39.3
Q ss_pred HHHHHHHHHhcCCCcE--EEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 271 MALEEVVQAAKGRVPV--FLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 271 ~~l~~i~~~~~~~i~v--ia~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+.++++++.. ++|| ++.|||.+++|+.+++.+|||+|++||.++.
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 5666666655 7888 6999999999999999999999999999985
No 93
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.71 E-value=3.3e-07 Score=83.51 Aligned_cols=95 Identities=20% Similarity=0.139 Sum_probs=72.7
Q ss_pred CCHHHHHHHHhhcCCCEEEEEc-----c----CHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc
Q 017434 215 LNWKDVKWLQTITSLPILVKGV-----L----TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK 281 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v-----~----~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~ 281 (371)
...++|+.+++.++. ..+|.+ + +.++ ++.+.++|+|+|..|..-+ ..+..+.+.+..+++.++
T Consensus 113 ~v~~ei~~v~~a~~~-~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~---~~~gAt~edv~lm~~~v~ 188 (231)
T 3ndo_A 113 AVSADITAVRKAVRA-ATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH---PSGGASVQAVEIMARTVG 188 (231)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC---TTCSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccC-CceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC---CCCCCCHHHHHHHHHHhC
Confidence 456778999988853 355876 4 5554 4667899999999986311 023456777777778887
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 282 GRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 282 ~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
++++|-++||||+.+|+++++++||+.++..+
T Consensus 189 ~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 189 ERLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred CCceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 78999999999999999999999999776654
No 94
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.67 E-value=2.6e-08 Score=94.39 Aligned_cols=115 Identities=21% Similarity=0.224 Sum_probs=84.0
Q ss_pred cCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC---------------------C--CC-------ccchHHHHHHH
Q 017434 227 TSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ---------------------L--DY-------VPATVMALEEV 276 (371)
Q Consensus 227 ~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~---------------------~--~~-------~~~~~~~l~~i 276 (371)
.+.++++ .+.+.+++.++.++|+|.|.+.+++|+. + +. ..++++.++++
T Consensus 124 ~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i 202 (297)
T 4adt_A 124 FKTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLT 202 (297)
T ss_dssp CSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHH
T ss_pred CCCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHH
Confidence 3678776 5788999999999999999998765432 0 01 13457788888
Q ss_pred HHHhcCCCcEE--EecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 017434 277 VQAAKGRVPVF--LDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSL 350 (371)
Q Consensus 277 ~~~~~~~i~vi--a~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l 350 (371)
++.+ ++||+ +.|||++++|+.+++.+|||+|++|+.++.+ .. ....++.|++.+..++...++.++
T Consensus 203 ~~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a---~d---p~~~~~~l~~ai~~~~~~~~~~~i 270 (297)
T 4adt_A 203 RKLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES---EN---PQKMASSIVMAVSNFNNPKILLNV 270 (297)
T ss_dssp HHHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS---SC---HHHHHHHHHHHHHTTTCHHHHHHT
T ss_pred HHhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC---CC---HHHHHHHHHHHHHhhCCHHHHHHH
Confidence 8876 57776 9999999999999999999999999998853 12 224555666666655544444333
No 95
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.67 E-value=4.3e-07 Score=84.66 Aligned_cols=169 Identities=15% Similarity=0.118 Sum_probs=101.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+...++++..+++|+++|.+. .|... |..-. ..+ .......+........
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG--~P~sd------------P~adg-p~i------------~~a~~~al~~G~~~~~ 80 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIG--FPFSD------------PVADG-PTI------------QVAHEVALKNGIRFED 80 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEE--CCCSC------------CTTSC-HHH------------HHHHHHHHHTTCCHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEEC--CCCCC------------ccccc-HHH------------HHHHHHHHHcCCCHHH
Confidence 355677888999999999999874 44320 10000 000 0000111111111122
Q ss_pred CHHHHHHHHhhc-CCCEEEEEccC-------HHHHHHHHHhCCCEEEEeC---------------CCCc--------C--
Q 017434 216 NWKDVKWLQTIT-SLPILVKGVLT-------AEDASLAIQYGAAGIIVSN---------------HGAR--------Q-- 262 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~v~~-------~e~a~~a~~~Gad~I~vs~---------------~gg~--------~-- 262 (371)
..+.++++|+.+ ++|+++=+-.+ .+.++.+.++|+|++++.. ||-. .
T Consensus 81 ~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~ 160 (262)
T 2ekc_A 81 VLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTR 160 (262)
T ss_dssp HHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCH
T ss_pred HHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCH
Confidence 457799999988 89998732222 3557889999999998742 1100 0
Q ss_pred ------------------CC--Cc-------cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 263 ------------------LD--YV-------PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 263 ------------------~~--~~-------~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
.. .| ....+.+.++++.. ++||++.+||++++++.+ +..|||+|.+|+.+
T Consensus 161 ~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai 237 (262)
T 2ekc_A 161 KRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVGSAL 237 (262)
T ss_dssp HHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHH
Confidence 00 00 01124566666655 799999999999999999 88899999999999
Q ss_pred HHhhhcCChHHHHHHHHHH
Q 017434 316 PFSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 316 l~~~~~~G~~gv~~~l~~l 334 (371)
.........+.+.++++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~ 256 (262)
T 2ekc_A 238 VKLAGQKKIEDLGNLVKEL 256 (262)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HhhhhhhhHHHHHHHHHHH
Confidence 8764322333344443333
No 96
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.66 E-value=5.9e-08 Score=89.45 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 269 TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 269 ~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.++.+.++++.+ ++|||+.|||++.+|+.+++.+|||+|++||+++.
T Consensus 188 ~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 188 DTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp -------------------------------------------------
T ss_pred CHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 345566666655 79999999999999999999999999999999874
No 97
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.65 E-value=4.9e-07 Score=82.07 Aligned_cols=169 Identities=21% Similarity=0.157 Sum_probs=105.4
Q ss_pred HHHHHHHHcCCcEEecCCCCCCHHHHhccC---C-CceEEEEeec--CChHHHHHHHHHHHHcCCcEEEEecCCCCCcch
Q 017434 95 ATARAASAAGTIMTLSSWATSSVEEVSSTG---P-GIRFFQLYVT--KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRR 168 (371)
Q Consensus 95 ~~a~aa~~~G~~~~~s~~~~~~~eei~~~~---~-~~~~~QLy~~--~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r 168 (371)
.+.+.|.+.|...+.-. ..-++...+.. + ....+--||. ...+.....++.|.+.|++.|++.++.-
T Consensus 23 ~l~~~a~~~~~~aVcv~--p~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig----- 95 (220)
T 1ub3_A 23 KAAEEALEYGFYGLCIP--PSYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLG----- 95 (220)
T ss_dssp HHHHHHHHHTCSEEECC--GGGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHH-----
T ss_pred HHHHHHHHhCCCEEEEC--HHHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccch-----
Confidence 67788888887655421 11122222111 1 1111112322 2334444566778889999998876410
Q ss_pred hHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-----cCHHH--
Q 017434 169 EADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-----LTAED-- 241 (371)
Q Consensus 169 ~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-----~~~e~-- 241 (371)
.... .+.....++|..+++.++-+ .+|.+ ++.++
T Consensus 96 ------------------------------------~~~~--g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~ 136 (220)
T 1ub3_A 96 ------------------------------------RAKA--GDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIA 136 (220)
T ss_dssp ------------------------------------HHHT--TCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHH
T ss_pred ------------------------------------hhhC--CCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHH
Confidence 0000 12233567788998888655 66865 45554
Q ss_pred --HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 242 --ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 242 --a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
++.+.++|+|.|..|..-+ .+..+.+.+..+++.++.++||.++|||++.+|+++.+.+||+-++..+
T Consensus 137 ~a~~ia~eaGADfVKTsTGf~----~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~ 206 (220)
T 1ub3_A 137 RLAEAAIRGGADFLKTSTGFG----PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGTSS 206 (220)
T ss_dssp HHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccchhH
Confidence 5678899999999985211 1335666666666666668999999999999999999999999554443
No 98
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.64 E-value=5.9e-08 Score=87.58 Aligned_cols=169 Identities=17% Similarity=0.098 Sum_probs=114.0
Q ss_pred EEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCC-ccccccccccccCCCCCCCcchhhhHhh
Q 017434 130 FQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASYVA 208 (371)
Q Consensus 130 ~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (371)
+-+....+.+...++++.+.+.|++.+.+|+.+|..-.-.+.++..| |. .+...++... .+.......|+...+
T Consensus 16 i~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~--p~~~IGAGTVlt~--~~a~~ai~AGA~fiv- 90 (217)
T 3lab_A 16 IPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAV--PEAIVGAGTVCTA--DDFQKAIDAGAQFIV- 90 (217)
T ss_dssp EEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TTSEEEEECCCSH--HHHHHHHHHTCSEEE-
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHC--CCCeEeeccccCH--HHHHHHHHcCCCEEE-
Confidence 33444578888889999999999999999999987655666676665 32 1222222110 000000111222222
Q ss_pred hhcccCCCHHHHHHHHhhcCC------CEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC
Q 017434 209 NQIDRSLNWKDVKWLQTITSL------PILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 282 (371)
Q Consensus 209 ~~~~~~~~~~~i~~ir~~~~~------pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~ 282 (371)
.|.++.+.++..++. ++ |++ -++.|++++..+.++|+|.|.++-.. ..+ ....++.++..++
T Consensus 91 ---sP~~~~evi~~~~~~-~v~~~~~~~~~-PG~~TptE~~~A~~~Gad~vK~FPa~---~~g---G~~~lkal~~p~p- 158 (217)
T 3lab_A 91 ---SPGLTPELIEKAKQV-KLDGQWQGVFL-PGVATASEVMIAAQAGITQLKCFPAS---AIG---GAKLLKAWSGPFP- 158 (217)
T ss_dssp ---ESSCCHHHHHHHHHH-HHHCSCCCEEE-EEECSHHHHHHHHHTTCCEEEETTTT---TTT---HHHHHHHHHTTCT-
T ss_pred ---eCCCcHHHHHHHHHc-CCCccCCCeEe-CCCCCHHHHHHHHHcCCCEEEECccc---ccc---CHHHHHHHHhhhc-
Confidence 256676777766553 55 766 68899999999999999999995321 011 2466777776664
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 283 RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 283 ~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
++|+++.|||. .+++.+++++|+.++..|+.+.
T Consensus 159 ~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 159 DIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp TCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred CceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 79999999998 8999999999999887776443
No 99
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.64 E-value=5.6e-07 Score=83.55 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=60.0
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
.+.++.+.+.|++.|.+.+........+ +.++.+.++++.+ ++||++.|||++++|+.+++.+|||+|++|++++.+
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~ 235 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 235 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC--
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcC
Confidence 3557899999999999864321111122 3578888887766 799999999999999999999999999999998753
No 100
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.64 E-value=1.4e-07 Score=84.89 Aligned_cols=95 Identities=20% Similarity=0.143 Sum_probs=72.5
Q ss_pred cCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 213 RSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 213 ~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+..+.+.++..++ .+.|++. ++.|++++..+.+.|+|+|.++. .. .-+ .++.++.++..++ ++|+++.|||
T Consensus 90 ~~~d~~v~~~~~~-~g~~~i~-G~~t~~e~~~A~~~Gad~v~~fp--a~-~~g---G~~~lk~l~~~~~-~ipvvaiGGI 160 (207)
T 2yw3_A 90 PGLLEEVAALAQA-RGVPYLP-GVLTPTEVERALALGLSALKFFP--AE-PFQ---GVRVLRAYAEVFP-EVRFLPTGGI 160 (207)
T ss_dssp SSCCHHHHHHHHH-HTCCEEE-EECSHHHHHHHHHTTCCEEEETT--TT-TTT---HHHHHHHHHHHCT-TCEEEEBSSC
T ss_pred CCCCHHHHHHHHH-hCCCEEe-cCCCHHHHHHHHHCCCCEEEEec--Cc-ccc---CHHHHHHHHhhCC-CCcEEEeCCC
Confidence 3445455555554 7888876 47899999999999999999943 11 101 2456777777664 6999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
. .+++.+++++||++|.+|+.++.
T Consensus 161 ~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 161 K-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp C-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred C-HHHHHHHHhCCCcEEEEehhhhC
Confidence 7 79999999999999999998763
No 101
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.64 E-value=1.7e-07 Score=87.03 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=59.4
Q ss_pred ccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC---CCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 236 VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG---RVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 236 v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
+.+.+++.++.++|+|.|-+.|..-+.. ...++.+.++.+.++. ++|+++.|||++++|+.++.. ||++|.+|
T Consensus 161 v~~~~E~~~a~~~gad~IGvn~~~l~~~---~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 161 VHTERELEIALEAGAEVLGINNRDLATL---HINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIG 236 (254)
T ss_dssp ECSHHHHHHHHHHTCSEEEEESBCTTTC---CBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEEC
T ss_pred ECCHHHHHHHHHcCCCEEEEccccCcCC---CCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEe
Confidence 3567777778888888777766543221 2334555566666543 689999999999999999999 99999999
Q ss_pred hhHHHh
Q 017434 313 RPVPFS 318 (371)
Q Consensus 313 r~~l~~ 318 (371)
++++.+
T Consensus 237 sAl~~~ 242 (254)
T 1vc4_A 237 TSLMRA 242 (254)
T ss_dssp HHHHTS
T ss_pred HHHcCC
Confidence 999863
No 102
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.62 E-value=5.5e-07 Score=82.44 Aligned_cols=76 Identities=20% Similarity=0.198 Sum_probs=61.5
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc---CCCEEEEchhH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL---GASGVFVGRPV 315 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~l---GAd~V~iGr~~ 315 (371)
.+.++.+.++|++.|.+++....+...+ ..++.+.++++.+ ++||+++|||++.+|+.+++++ |||+|++||.+
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLGG-PNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTSC-CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 5778999999999999865321111122 3688888888765 7999999999999999999998 99999999998
Q ss_pred HH
Q 017434 316 PF 317 (371)
Q Consensus 316 l~ 317 (371)
+.
T Consensus 229 ~~ 230 (244)
T 2y88_A 229 YA 230 (244)
T ss_dssp HT
T ss_pred HC
Confidence 85
No 103
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=98.61 E-value=4.4e-08 Score=96.62 Aligned_cols=103 Identities=17% Similarity=0.016 Sum_probs=72.6
Q ss_pred cCCCHHHHHHHHhhcC-CCEEEEEcc-----------C--------HHHHHHH---HHhC--CCEEEEeCCCC-cCCCCc
Q 017434 213 RSLNWKDVKWLQTITS-LPILVKGVL-----------T--------AEDASLA---IQYG--AAGIIVSNHGA-RQLDYV 266 (371)
Q Consensus 213 ~~~~~~~i~~ir~~~~-~pv~vK~v~-----------~--------~e~a~~a---~~~G--ad~I~vs~~gg-~~~~~~ 266 (371)
..|..++++.+|+.++ .||.+|+.. + .+-++.+ .+.| +|+|.|+.... .+.+..
T Consensus 218 ~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~ 297 (407)
T 3tjl_A 218 ARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVS 297 (407)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECC
T ss_pred hHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCC
Confidence 3467799999999985 589999863 2 1125667 7779 99999974211 111111
Q ss_pred cc-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc---C-CCEEEEchhHHH
Q 017434 267 PA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL---G-ASGVFVGRPVPF 317 (371)
Q Consensus 267 ~~-~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~l---G-Ad~V~iGr~~l~ 317 (371)
+. .+..+..+++.+ ++|||++|||.+.+|+.+++.. | ||+|++||+++.
T Consensus 298 ~~~~~~~~~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia 351 (407)
T 3tjl_A 298 EEDQAGDNEFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS 351 (407)
T ss_dssp GGGCCCCSHHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH
T ss_pred ccchhHHHHHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh
Confidence 11 113355666666 6899999999999888887776 5 999999999985
No 104
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.56 E-value=4e-07 Score=82.91 Aligned_cols=164 Identities=16% Similarity=0.180 Sum_probs=101.5
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCcc-ccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHL-TLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
..+.+...+.++.+.+.|++.+.++...+..-...+.++..+ |... ...++...+ ........++. ++ .-|
T Consensus 25 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~--~~l~vgaGtvl~~d--~~~~A~~aGAd-~v---~~p 96 (224)
T 1vhc_A 25 LDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANR--PDFLIAAGTVLTAE--QVVLAKSSGAD-FV---VTP 96 (224)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TTCEEEEESCCSHH--HHHHHHHHTCS-EE---ECS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhC--cCcEEeeCcEeeHH--HHHHHHHCCCC-EE---EEC
Confidence 356666667777777788888888876654333334444443 2111 111100000 00000000111 11 123
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 214 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
..+.+.++..++ .+.|+++ ++.|++++..+.++|+|+|.++. .. .....+.|++++..++ ++|+++.|||.
T Consensus 97 ~~d~~v~~~ar~-~g~~~i~-Gv~t~~e~~~A~~~Gad~vk~Fp--a~----~~gG~~~lk~l~~~~~-~ipvvaiGGI~ 167 (224)
T 1vhc_A 97 GLNPKIVKLCQD-LNFPITP-GVNNPMAIEIALEMGISAVKFFP--AE----ASGGVKMIKALLGPYA-QLQIMPTGGIG 167 (224)
T ss_dssp SCCHHHHHHHHH-TTCCEEC-EECSHHHHHHHHHTTCCEEEETT--TT----TTTHHHHHHHHHTTTT-TCEEEEBSSCC
T ss_pred CCCHHHHHHHHH-hCCCEEe-ccCCHHHHHHHHHCCCCEEEEee--Cc----cccCHHHHHHHHhhCC-CCeEEEECCcC
Confidence 456566777777 7888876 58899999999999999999943 11 0112566777776664 69999999995
Q ss_pred CHHHHHHHHHc-CCCEEEEchhHHH
Q 017434 294 RGTDVFKALAL-GASGVFVGRPVPF 317 (371)
Q Consensus 294 ~~~dv~kal~l-GAd~V~iGr~~l~ 317 (371)
.+++.+++++ |+++|. |+.+.-
T Consensus 168 -~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 168 -LHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp -TTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred -HHHHHHHHhcCCCEEEE-EchhcC
Confidence 7899999998 899999 887764
No 105
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.55 E-value=1.5e-06 Score=77.83 Aligned_cols=169 Identities=11% Similarity=0.065 Sum_probs=104.4
Q ss_pred hHhHHHHHHHHHcCCcE-EecC-----CCCCCHHHHhccCC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCC
Q 017434 91 EGECATARAASAAGTIM-TLSS-----WATSSVEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTP 163 (371)
Q Consensus 91 ~~e~~~a~aa~~~G~~~-~~s~-----~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p 163 (371)
+..+.+++.+. .|+.. .++. .....++++++..+ .|....+.. .+.. ...++.+.++|++.+.+..- +
T Consensus 13 ~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~-~~~~--~~~~~~~~~~Gad~v~v~~~-~ 87 (211)
T 3f4w_A 13 PEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKI-MDGG--HFESQLLFDAGADYVTVLGV-T 87 (211)
T ss_dssp HHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEE-CSCH--HHHHHHHHHTTCSEEEEETT-S
T ss_pred HHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHHhCCCCEEEEEEEe-ccch--HHHHHHHHhcCCCEEEEeCC-C
Confidence 44566777764 46665 3442 12223455665533 344444433 2322 23478888999999876421 0
Q ss_pred CCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEE--ccCH-H
Q 017434 164 RLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG--VLTA-E 240 (371)
Q Consensus 164 ~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~--v~~~-e 240 (371)
. ..-..+.++.+++ .++++++-. ..++ +
T Consensus 88 ~------------------------------------------------~~~~~~~~~~~~~-~g~~~~v~~~~~~t~~~ 118 (211)
T 3f4w_A 88 D------------------------------------------------VLTIQSCIRAAKE-AGKQVVVDMICVDDLPA 118 (211)
T ss_dssp C------------------------------------------------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHH
T ss_pred C------------------------------------------------hhHHHHHHHHHHH-cCCeEEEEecCCCCHHH
Confidence 0 0000133444444 366666532 2333 6
Q ss_pred HHHHHHHhCCCEEEEeCC-CCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 241 DASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.++.+.+.|+|.|.+... +|.. .++..++.+.++++.++ ++||+++|||+ ++++.+++.+|||+|.+||+++.
T Consensus 119 ~~~~~~~~g~d~i~v~~g~~g~~--~~~~~~~~i~~l~~~~~-~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 119 RVRLLEEAGADMLAVHTGTDQQA--AGRKPIDDLITMLKVRR-KARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITH 192 (211)
T ss_dssp HHHHHHHHTCCEEEEECCHHHHH--TTCCSHHHHHHHHHHCS-SCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCCcccc--cCCCCHHHHHHHHHHcC-CCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcC
Confidence 689999999999988632 1111 12235677888887753 69999999996 99999999999999999998875
No 106
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.54 E-value=1.1e-06 Score=80.40 Aligned_cols=74 Identities=24% Similarity=0.305 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCEEEEeCC--CCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc---CCCEEEEch
Q 017434 239 AEDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL---GASGVFVGR 313 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~l---GAd~V~iGr 313 (371)
.+.++.+.+.|++.|.+.+. ++. .....++.+.++++.+ ++||+++|||++++|+.+++++ |||+|++||
T Consensus 149 ~e~~~~~~~~G~~~i~~~~~~~~~~---~~g~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 149 YETLDRLNKEGCARYVVTDIAKDGT---LQGPNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEEC----------CCCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHHHhCCCCEEEEeccCcccc---cCCCCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 45579999999999988652 221 1124688888888776 7999999999999999999998 999999999
Q ss_pred hHHH
Q 017434 314 PVPF 317 (371)
Q Consensus 314 ~~l~ 317 (371)
.++.
T Consensus 224 al~~ 227 (244)
T 1vzw_A 224 ALYA 227 (244)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9885
No 107
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.52 E-value=1.3e-06 Score=78.86 Aligned_cols=95 Identities=20% Similarity=0.116 Sum_probs=68.2
Q ss_pred HHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcC-CCC-ccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 217 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQ-LDY-VPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~-~~~-~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
.+.++.++. +..+.+ .+.++++++.+.+.|+|+|.+++..+++ ..+ .+..++.+.++++.+ ++||+++||| +
T Consensus 101 ~~~~~~~~~--~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~ 174 (221)
T 1yad_A 101 PKQIRARFP--HLHIGR-SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-T 174 (221)
T ss_dssp HHHHHHHCT--TCEEEE-EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-C
T ss_pred HHHHHHHCC--CCEEEE-EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-C
Confidence 344444432 333333 3468899999999999999997632221 122 134677788887766 7999999999 8
Q ss_pred HHHHHHHHHcCCCEEEEchhHHH
Q 017434 295 GTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
++++.+++++||++|.+|+.++.
T Consensus 175 ~~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 175 PDRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp GGGHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEhHHhhC
Confidence 99999999999999999999874
No 108
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.51 E-value=6.8e-06 Score=76.42 Aligned_cols=212 Identities=13% Similarity=0.171 Sum_probs=125.7
Q ss_pred CcceeecccccccccCChHhHHHHHHHHHcCCcEEecCC---------CCC----C--------H---HHHhccCC-Cce
Q 017434 74 SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSW---------ATS----S--------V---EEVSSTGP-GIR 128 (371)
Q Consensus 74 ~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~---------~~~----~--------~---eei~~~~~-~~~ 128 (371)
..||+-+..| .+ -.|+.+.+-|+.+++.-. +|. + + +||..... .|.
T Consensus 27 ~~~iig~gaG-tG--------lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV 97 (286)
T 2p10_A 27 GEPIIGGGAG-TG--------LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPV 97 (286)
T ss_dssp TCCEEEEEES-SH--------HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCE
T ss_pred CCceEEEecc-cc--------hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCE
Confidence 3577666543 33 589999999999887411 010 0 1 24444443 689
Q ss_pred EEEEeecCChH-HHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHh
Q 017434 129 FFQLYVTKHRN-VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYV 207 (371)
Q Consensus 129 ~~QLy~~~d~~-~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (371)
++|+.. .|+. .+..+++.++++||.++ +| .|..|--.-..|+.+
T Consensus 98 ~Agv~~-~DP~~~~g~~Le~lk~~Gf~Gv-~N--~ptvglidG~fr~~L------------------------------- 142 (286)
T 2p10_A 98 LAGVNG-TDPFMVMSTFLRELKEIGFAGV-QN--FPTVGLIDGLFRQNL------------------------------- 142 (286)
T ss_dssp EEEECT-TCTTCCHHHHHHHHHHHTCCEE-EE--CSCGGGCCHHHHHHH-------------------------------
T ss_pred EEEECC-cCCCcCHHHHHHHHHHhCCceE-EE--CCCcccccchhhhhH-------------------------------
Confidence 999765 4544 67788899999999998 54 454332111111110
Q ss_pred hhhcccCCCHH-HHHHHHhhcC-CCEEEEEccCHHHHHHHHHhCCCEEEEeCC---CCcC-CCCccc--h-HHHHHHHH-
Q 017434 208 ANQIDRSLNWK-DVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNH---GARQ-LDYVPA--T-VMALEEVV- 277 (371)
Q Consensus 208 ~~~~~~~~~~~-~i~~ir~~~~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~---gg~~-~~~~~~--~-~~~l~~i~- 277 (371)
-...+.++ +++.++..-. .-+.+--+.++++++.+.++|+|.|++.-. |+.- .....+ . .+.+.++.
T Consensus 143 ---EE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~ 219 (286)
T 2p10_A 143 ---EETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIE 219 (286)
T ss_dssp ---HHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHH
T ss_pred ---hhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHH
Confidence 01112222 2333333221 123333458999999999999999999532 1210 011111 1 23333333
Q ss_pred --HHhcCCCcEEEec-CCCCHHHHHHHHHc--CCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 278 --QAAKGRVPVFLDG-GVRRGTDVFKALAL--GASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 278 --~~~~~~i~via~G-GI~~~~dv~kal~l--GAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
+.+++++-|++-| ||.+++|+.+++.+ |++++..++.+... + ++..+..+.++++
T Consensus 220 a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 220 AARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp HHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred HHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 3445577777777 99999999999999 99999999988763 2 4555666555554
No 109
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.50 E-value=5.2e-06 Score=75.71 Aligned_cols=159 Identities=16% Similarity=0.132 Sum_probs=106.0
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..|...+.+.+++++++|++.+-+.+-- ..| .| +-.
T Consensus 13 ~~D~~~l~~~i~~l~~~g~d~~h~DVmD-----------g~F-vp--------------------------------n~~ 48 (228)
T 3ovp_A 13 NSDLANLGAECLRMLDSGADYLHLDVMD-----------GHF-VP--------------------------------NIT 48 (228)
T ss_dssp TSCGGGHHHHHHHHHHTTCSCEEEEEEB-----------SSS-SS--------------------------------CBC
T ss_pred eCCchhHHHHHHHHHHcCCCEEEEEecC-----------CCc-Cc--------------------------------ccc
Confidence 4577778889999999999877554310 000 01 112
Q ss_pred CCHHHHHHHHhh--cCCCEEEEEc-cCHH-HHHHHHHhCCCEEEEeCCCCc------------------------C----
Q 017434 215 LNWKDVKWLQTI--TSLPILVKGV-LTAE-DASLAIQYGAAGIIVSNHGAR------------------------Q---- 262 (371)
Q Consensus 215 ~~~~~i~~ir~~--~~~pv~vK~v-~~~e-~a~~a~~~Gad~I~vs~~gg~------------------------~---- 262 (371)
+-.+.++++|+. .+.|+-++.. .+++ .++.+.++|+|.|+++.-... .
T Consensus 49 ~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l 128 (228)
T 3ovp_A 49 FGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYL 128 (228)
T ss_dssp BCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGT
T ss_pred cCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHH
Confidence 345778888888 4788888763 4454 367788899999999631110 0
Q ss_pred ------CC-----------C----ccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhc
Q 017434 263 ------LD-----------Y----VPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAV 321 (371)
Q Consensus 263 ------~~-----------~----~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~ 321 (371)
.| + .+..++-+.++++.. .+++|.++|||+ .+.+.++..+|||.+.+||++..+
T Consensus 129 ~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a--- 203 (228)
T 3ovp_A 129 APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS--- 203 (228)
T ss_dssp GGGGGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC---
T ss_pred HHHhccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC---
Confidence 00 1 133556677777654 368999999996 899999999999999999987632
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHh
Q 017434 322 DGEAGVRKVLQMLRDEFELTMALS 345 (371)
Q Consensus 322 ~G~~gv~~~l~~l~~el~~~m~~~ 345 (371)
.. ..+.++.++++++......
T Consensus 204 ~d---p~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 204 ED---PRSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp SC---HHHHHHHHHHHHHHHHHHC
T ss_pred CC---HHHHHHHHHHHHHHHHhhc
Confidence 12 2355677777777665543
No 110
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.46 E-value=1.2e-06 Score=80.08 Aligned_cols=76 Identities=24% Similarity=0.337 Sum_probs=60.9
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.++.+.+.|+|.|.+.+........ ...++.+.++++.. ++||+++|||.+.+|+.+++.+|||+|++||.++.
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~-~~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGL-GYDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCS-CCCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcC-cCCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 466889999999999986432111111 23677888888776 79999999999999999999999999999999875
No 111
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.45 E-value=8.5e-07 Score=81.57 Aligned_cols=77 Identities=22% Similarity=0.283 Sum_probs=62.8
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
.+.++.+.+.|++.|.+.+.+......+ +.++.+.++++.+ ++||++.|||++.+|+.+++.+|||+|++|+.++.+
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~ 231 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEG-YDLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFG 231 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcC
Confidence 5778999999999998864221111123 3688899998887 799999999999999999999999999999999853
No 112
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.42 E-value=6.5e-06 Score=75.70 Aligned_cols=177 Identities=10% Similarity=0.113 Sum_probs=107.7
Q ss_pred HHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhh---cCCCCccccccccccccCCC
Q 017434 119 EVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNR---FVLPPHLTLKNYEGLYIGKM 195 (371)
Q Consensus 119 ei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~---~~~p~~~~~~~~~~~~~~~~ 195 (371)
|++++.|...++ ..|+.. +.+ ..++|+.+|-|-.|...++....+++.- ..+| +-.+++- ++..++
T Consensus 51 EiKraSPSkg~i----~~dp~~---iA~-~~~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v~lP--vLrKDFi-id~yQI 119 (258)
T 4a29_A 51 VYERKSPSGLDV----ERDPIE---YAK-FMERYAVGLSITTEEKYFNGSYETLRKIASSVSIP--ILMSDFI-VKESQI 119 (258)
T ss_dssp EECSBCTTSCBC----CCCHHH---HHH-HHTTTCSEEEEECCSTTTCCCHHHHHHHHTTCSSC--EEEESCC-CSHHHH
T ss_pred EEecCCCCCCCc----cCCHHH---HHH-HHhCCCeEEEEeCCCCCCCCCHHHHHHHHHhcCCC--Eeecccc-ccHHHH
Confidence 455555533232 235433 333 3458999999888988887777776533 3333 1112110 000000
Q ss_pred CCCCcchhhhHhhhhcccCCC------HHHHHHH---HhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCc
Q 017434 196 DKTDDSGLASYVANQIDRSLN------WKDVKWL---QTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYV 266 (371)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~------~~~i~~i---r~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~ 266 (371)
...... .-|.-+. .+.++.+ ....++-++| .+-+.++++++.++|++.|-|.|+. +..-
T Consensus 120 -------~eAr~~-GADaILLI~a~L~~~~l~~l~~~A~~lGl~~Lv-EVh~~~El~rAl~~~a~iIGINNRn---L~tf 187 (258)
T 4a29_A 120 -------DDAYNL-GADTVLLIVKILTERELESLLEYARSYGMEPLI-LINDENDLDIALRIGARFIGIMSRD---FETG 187 (258)
T ss_dssp -------HHHHHH-TCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHHTTCSEEEECSBC---TTTC
T ss_pred -------HHHHHc-CCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHH-hcchHHHHHHHhcCCCcEEEEeCCC---cccc
Confidence 000000 0122221 1223333 3344666554 4578888999999999988887753 3333
Q ss_pred cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 267 PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 267 ~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
..+++...++...++.++.+++.+||++.+|+.++...|+|+|.||..++..
T Consensus 188 ~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~ 239 (258)
T 4a29_A 188 EINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRN 239 (258)
T ss_dssp CBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred ccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCC
Confidence 3455666667677777889999999999999999999999999999999974
No 113
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.40 E-value=9.1e-07 Score=81.05 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=63.1
Q ss_pred CH-HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc-----C-CCEEE
Q 017434 238 TA-EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL-----G-ASGVF 310 (371)
Q Consensus 238 ~~-e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~l-----G-Ad~V~ 310 (371)
+. |.++.+.++|++.|.+++........+ +.++.+.++++.+ ++|||++|||++++|+.+++.+ | ||+|+
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~ 221 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVI 221 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEE
Confidence 44 447889999999999976421111122 3688999999887 7999999999999999999998 9 99999
Q ss_pred EchhHHHh
Q 017434 311 VGRPVPFS 318 (371)
Q Consensus 311 iGr~~l~~ 318 (371)
+|++++.+
T Consensus 222 vgsal~~~ 229 (241)
T 1qo2_A 222 VGRAFLEG 229 (241)
T ss_dssp ECHHHHTT
T ss_pred eeHHHHcC
Confidence 99999864
No 114
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.39 E-value=2.5e-05 Score=71.01 Aligned_cols=99 Identities=19% Similarity=0.116 Sum_probs=69.1
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEc-----cCHHH----HHHHHHhCCCEEEEeCCCCc------CCCCccchHHHHHHHHH
Q 017434 214 SLNWKDVKWLQTITSLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGAR------QLDYVPATVMALEEVVQ 278 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v-----~~~e~----a~~a~~~Gad~I~vs~~gg~------~~~~~~~~~~~l~~i~~ 278 (371)
....++|+.+++.++-. .+|.+ ++.++ ++.+.++|+|.|..|+.-+. ..+.+..+.+.+..+++
T Consensus 98 ~~v~~ei~~v~~a~~~~-~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~ 176 (226)
T 1vcv_A 98 AEVRRDLISVVGAAGGR-VVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIAR 176 (226)
T ss_dssp HHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHH
Confidence 34567788898887533 56754 45554 56788999999999853210 01123344554444444
Q ss_pred H---hcCCCcEEEecCCCCHHHHHHHHHc---CCC----EEEEch
Q 017434 279 A---AKGRVPVFLDGGVRRGTDVFKALAL---GAS----GVFVGR 313 (371)
Q Consensus 279 ~---~~~~i~via~GGI~~~~dv~kal~l---GAd----~V~iGr 313 (371)
. ++++++|-++|||++.+|+++.+.+ ||+ -++..+
T Consensus 177 ~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 177 YIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp HHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred HHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCc
Confidence 4 6668999999999999999999999 999 766554
No 115
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=98.38 E-value=4e-06 Score=82.80 Aligned_cols=101 Identities=13% Similarity=-0.048 Sum_probs=61.3
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEccC--------------HH----HHHHHHHh---C--CCEEEEeCCCCcC--CCCccc
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGVLT--------------AE----DASLAIQY---G--AAGIIVSNHGARQ--LDYVPA 268 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v~~--------------~e----~a~~a~~~---G--ad~I~vs~~gg~~--~~~~~~ 268 (371)
|..|+|+.||+.+ +-||.+|+... .+ .+..+... | .+.+.++...... ...+..
T Consensus 224 f~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (400)
T 4gbu_A 224 FTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEG 303 (400)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTT
T ss_pred HHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccc
Confidence 6789999999998 35899998521 11 12222222 2 3455544221100 000000
Q ss_pred --hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc-CCCEEEEchhHHH
Q 017434 269 --TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALAL-GASGVFVGRPVPF 317 (371)
Q Consensus 269 --~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~l-GAd~V~iGr~~l~ 317 (371)
.......+++.+ ++|||+.|||.+..++.+.+.. +||.|.+||+++.
T Consensus 304 ~~~~~~~~~ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia 353 (400)
T 4gbu_A 304 EYEGGSNDFVYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFIS 353 (400)
T ss_dssp CCCSCCSTHHHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHH
T ss_pred hhhhHHHHHHHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHH
Confidence 001112344555 7899999999998888888876 4999999999985
No 116
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.38 E-value=1e-06 Score=81.00 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=60.5
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.++.+.+.|++.|.+++........+ ..++.+.++++.+ ++||+++|||++.+|+.+++.+|||+|++|+.++.
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 4668999999999999863211111122 3678888887765 79999999999999999999999999999999885
No 117
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.36 E-value=3.3e-06 Score=76.29 Aligned_cols=164 Identities=16% Similarity=0.176 Sum_probs=101.2
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCc-cccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPH-LTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
..+.+...+.++.+.+.|++.+.++...+..-...+.++..+ |.. +...++...+ ........++...+ -|
T Consensus 24 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~--~~~~vgagtvi~~d--~~~~A~~aGAd~v~----~p 95 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEV--PEAIVGAGTVLNPQ--QLAEVTEAGAQFAI----SP 95 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHC--TTSEEEEESCCSHH--HHHHHHHHTCSCEE----ES
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHC--cCCEEeeCEEEEHH--HHHHHHHcCCCEEE----cC
Confidence 456666677888888888888888877665433334454444 221 1111110000 00000000111111 13
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 214 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
..+.+ +...++..+.|++. ++.|++++..+.++|+|+|.++. .. . ....+.|..++..++ ++|+++.|||.
T Consensus 96 ~~d~~-v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~Fp--a~-~---~gG~~~lk~i~~~~~-~ipvvaiGGI~ 166 (214)
T 1wbh_A 96 GLTEP-LLKAATEGTIPLIP-GISTVSELMLGMDYGLKEFKFFP--AE-A---NGGVKALQAIAGPFS-QVRFCPTGGIS 166 (214)
T ss_dssp SCCHH-HHHHHHHSSSCEEE-EESSHHHHHHHHHTTCCEEEETT--TT-T---TTHHHHHHHHHTTCT-TCEEEEBSSCC
T ss_pred CCCHH-HHHHHHHhCCCEEE-ecCCHHHHHHHHHCCCCEEEEec--Cc-c---ccCHHHHHHHhhhCC-CCeEEEECCCC
Confidence 34434 44455557888876 58999999999999999999943 11 0 112566777776654 69999999995
Q ss_pred CHHHHHHHHHc-CCCEEEEchhHHH
Q 017434 294 RGTDVFKALAL-GASGVFVGRPVPF 317 (371)
Q Consensus 294 ~~~dv~kal~l-GAd~V~iGr~~l~ 317 (371)
.+++.+++++ |+++|. |+.+.-
T Consensus 167 -~~n~~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 167 -PANYRDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp -TTTHHHHHTSTTBSCEE-EGGGSC
T ss_pred -HHHHHHHHhcCCCeEEE-eccccC
Confidence 7899999998 899999 887754
No 118
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.36 E-value=1.3e-06 Score=80.42 Aligned_cols=79 Identities=19% Similarity=0.150 Sum_probs=62.8
Q ss_pred EccCHHHHHHHHHhCCCEEEEeCC-CCcCCCCccchHHHHHHHHH-HhcCC-CcEEEecCCCCHHHHHHHHHcCCCEEEE
Q 017434 235 GVLTAEDASLAIQYGAAGIIVSNH-GARQLDYVPATVMALEEVVQ-AAKGR-VPVFLDGGVRRGTDVFKALALGASGVFV 311 (371)
Q Consensus 235 ~v~~~e~a~~a~~~Gad~I~vs~~-gg~~~~~~~~~~~~l~~i~~-~~~~~-i~via~GGI~~~~dv~kal~lGAd~V~i 311 (371)
...+++.++++.++|++.|.--+. -|+ ..|..+.+.+..+++ .. + +|||++|||.+++|+.+++++|||+|++
T Consensus 131 ~~~D~~~ak~l~~~G~~aVmPlg~pIGs--G~Gi~~~~~L~~i~~~~~--~~vPVI~~GGI~tpsDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 131 MGPDLVLAKRLAALGTATVMPLAAPIGS--GWGVRTRALLELFAREKA--SLPPVVVDAGLGLPSHAAEVMELGLDAVLV 206 (268)
T ss_dssp ECSCHHHHHHHHHHTCSCBEEBSSSTTT--CCCSTTHHHHHHHHHTTT--TSSCBEEESCCCSHHHHHHHHHTTCCEEEE
T ss_pred cCCCHHHHHHHHhcCCCEEEecCccCcC--CcccCCHHHHHHHHHhcC--CCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 357889999999999999965222 121 123445677888877 33 6 9999999999999999999999999999
Q ss_pred chhHHH
Q 017434 312 GRPVPF 317 (371)
Q Consensus 312 Gr~~l~ 317 (371)
|+.+..
T Consensus 207 gSAI~~ 212 (268)
T 2htm_A 207 NTAIAE 212 (268)
T ss_dssp SHHHHT
T ss_pred ChHHhC
Confidence 998874
No 119
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.35 E-value=2.5e-06 Score=77.02 Aligned_cols=95 Identities=16% Similarity=0.147 Sum_probs=68.8
Q ss_pred HHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC---CCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017434 220 VKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSN---HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 295 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~ 295 (371)
+..+++..+. ++++. +.+++++..+.+.|+|+|.++. .+..+....+..++.+.++++.++ ++||++.|||. +
T Consensus 107 ~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~ 183 (227)
T 2tps_A 107 AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-I 183 (227)
T ss_dssp HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-T
T ss_pred HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-H
Confidence 4555555554 34443 3678889999999999999853 111111123345777888877662 39999999999 9
Q ss_pred HHHHHHHHcCCCEEEEchhHHH
Q 017434 296 TDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 296 ~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+++.+++.+||++|.+|+.++.
T Consensus 184 ~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 184 DNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp TTSHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEhHHhhc
Confidence 9999999999999999999874
No 120
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.35 E-value=9.5e-06 Score=80.99 Aligned_cols=120 Identities=15% Similarity=0.177 Sum_probs=88.8
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVF 299 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~ 299 (371)
++..++ .++.+++ .+-+.++++++.++|+|.|-+.|++-+ .-...++...++...++.++++|+.|||++++|+.
T Consensus 150 ~~~a~~-lgm~~Lv-Evh~~eE~~~A~~lga~iIGinnr~L~---t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~ 224 (452)
T 1pii_A 150 AAVAHS-LEMGVLT-EVSNEEEQERAIALGAKVVGINNRDLR---DLSIDLNRTRELAPKLGHNVTVISESGINTYAQVR 224 (452)
T ss_dssp HHHHHH-TTCEEEE-EECSHHHHHHHHHTTCSEEEEESEETT---TTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHH
T ss_pred HHHHHH-cCCeEEE-EeCCHHHHHHHHHCCCCEEEEeCCCCC---CCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHH
Confidence 444444 4666553 568999999999999999999886433 22445667777777777679999999999999999
Q ss_pred HHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhc
Q 017434 300 KALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEIT 354 (371)
Q Consensus 300 kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~ 354 (371)
++..+ |++|.+|+.++.. +-....++.|.. .....||.++.+|..
T Consensus 225 ~~~~~-a~avLVGealmr~------~d~~~~~~~l~~---~~~KICGit~~eda~ 269 (452)
T 1pii_A 225 ELSHF-ANGFLIGSALMAH------DDLHAAVRRVLL---GENKVCGLTRGQDAK 269 (452)
T ss_dssp HHTTT-CSEEEECHHHHTC------SCHHHHHHHHHH---CSCEECCCCSHHHHH
T ss_pred HHHHh-CCEEEEcHHHcCC------cCHHHHHHHHHH---HhccccCCCcHHHHH
Confidence 99999 9999999999864 112233444432 234678999888876
No 121
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.31 E-value=2.1e-05 Score=72.48 Aligned_cols=153 Identities=20% Similarity=0.236 Sum_probs=101.7
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..|...+.+.+++++++|++.+-+.+-- ..| .| +-.
T Consensus 36 saD~~~L~~~i~~l~~~G~d~lHvDVmD-----------g~F-Vp--------------------------------nit 71 (246)
T 3inp_A 36 SADLARLGDDVKAVLAAGADNIHFDVMD-----------NHY-VP--------------------------------NLT 71 (246)
T ss_dssp GSCGGGHHHHHHHHHHTTCCCEEEEEEB-----------SSS-SS--------------------------------CBC
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEecC-----------CCc-Cc--------------------------------chh
Confidence 4577778889999999999876554310 000 01 112
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEc-cCHH-HHHHHHHhCCCEEEEeCC---------------CCc---------C-----
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGV-LTAE-DASLAIQYGAAGIIVSNH---------------GAR---------Q----- 262 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v-~~~e-~a~~a~~~Gad~I~vs~~---------------gg~---------~----- 262 (371)
+-.+.++.+|+.+ +.|+-+... .+++ .++.+.++|+|.|+++.- |.+ .
T Consensus 72 ~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~ 151 (246)
T 3inp_A 72 FGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLK 151 (246)
T ss_dssp CCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGT
T ss_pred cCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHH
Confidence 3457799999998 899998864 5554 467788999999999531 110 0
Q ss_pred -----CC-----------Cc----cchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhh
Q 017434 263 -----LD-----------YV----PATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSL 319 (371)
Q Consensus 263 -----~~-----------~~----~~~~~~l~~i~~~~~---~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~ 319 (371)
.| +| +..++-+.++++... .+++|.++|||+ .+.+.++.++|||.+.+||++..+
T Consensus 152 ~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a- 229 (246)
T 3inp_A 152 YVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNS- 229 (246)
T ss_dssp TTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTS-
T ss_pred HHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCC-
Confidence 00 11 345666676666542 258999999998 688999999999999999977632
Q ss_pred hcCChHHHHHHHHHHHHHH
Q 017434 320 AVDGEAGVRKVLQMLRDEF 338 (371)
Q Consensus 320 ~~~G~~gv~~~l~~l~~el 338 (371)
.. .++.++.|++.+
T Consensus 230 --~d---p~~~i~~l~~~i 243 (246)
T 3inp_A 230 --DS---YKQTIDKMRDEL 243 (246)
T ss_dssp --SC---HHHHHHHHHHHH
T ss_pred --CC---HHHHHHHHHHHH
Confidence 12 234455555544
No 122
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.31 E-value=1.9e-06 Score=88.60 Aligned_cols=77 Identities=16% Similarity=0.098 Sum_probs=63.6
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-cCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA-LGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~-lGAd~V~iGr~~l~ 317 (371)
.+.++.+.++|++.|.+.+...-+...| +.++.+.++++.+ ++|||++|||++.+|+.+++. +||++|++||.++.
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHR 531 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHc
Confidence 5779999999999999854211112233 4799999999887 799999999999999999998 89999999999875
Q ss_pred h
Q 017434 318 S 318 (371)
Q Consensus 318 ~ 318 (371)
+
T Consensus 532 ~ 532 (555)
T 1jvn_A 532 G 532 (555)
T ss_dssp T
T ss_pred C
Confidence 3
No 123
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.30 E-value=3.7e-06 Score=77.47 Aligned_cols=81 Identities=15% Similarity=0.110 Sum_probs=61.3
Q ss_pred ccCHHHHHHHHHhCCCEEEEeCCCCcC-CC-CccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 236 VLTAEDASLAIQYGAAGIIVSNHGARQ-LD-YVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 236 v~~~e~a~~a~~~Gad~I~vs~~gg~~-~~-~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
+-++++++.+.+.|+|+|.+++-..+. .. ..+..++.+.++++....++||++.||| +.+++.+++.+||++|.+|+
T Consensus 142 ~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 142 THDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp ECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred CCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 478899999999999999997632221 11 1233567777776542227999999999 89999999999999999999
Q ss_pred hHHH
Q 017434 314 PVPF 317 (371)
Q Consensus 314 ~~l~ 317 (371)
.++.
T Consensus 221 ai~~ 224 (243)
T 3o63_A 221 AITS 224 (243)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9875
No 124
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.29 E-value=2.1e-05 Score=72.57 Aligned_cols=93 Identities=14% Similarity=0.119 Sum_probs=71.2
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHh-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDV 298 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv 298 (371)
++..++ .++-+++ .+.+.++++++.++ |+|.|-+.|++-+ .-...++...++.+.++.++++|+.|||++++|+
T Consensus 143 ~~~a~~-lGl~~lv-Ev~~~eE~~~A~~l~g~~iIGinnr~l~---t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv 217 (251)
T 1i4n_A 143 YEAAEE-LGMDSLV-EVHSREDLEKVFSVIRPKIIGINTRDLD---TFEIKKNVLWELLPLVPDDTVVVAESGIKDPREL 217 (251)
T ss_dssp HHHHHT-TTCEEEE-EECSHHHHHHHHTTCCCSEEEEECBCTT---TCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGH
T ss_pred HHHHHH-cCCeEEE-EeCCHHHHHHHHhcCCCCEEEEeCcccc---cCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHH
Confidence 344433 4665553 45789999999999 9999999886432 2233455555666666667899999999999999
Q ss_pred HHHHHcCCCEEEEchhHHHh
Q 017434 299 FKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 299 ~kal~lGAd~V~iGr~~l~~ 318 (371)
.++..+ |++|.+|+.++.+
T Consensus 218 ~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 218 KDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp HHHTTT-CSEEEECHHHHHC
T ss_pred HHHHHh-CCEEEEcHHHcCC
Confidence 999999 9999999999864
No 125
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.28 E-value=6.5e-06 Score=74.33 Aligned_cols=187 Identities=17% Similarity=0.176 Sum_probs=107.5
Q ss_pred ChHhHHHHHHHHHcCCcEE-ecC-----CCCCCHHHHhccCC-CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCC
Q 017434 90 PEGECATARAASAAGTIMT-LSS-----WATSSVEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (371)
Q Consensus 90 ~~~e~~~a~aa~~~G~~~~-~s~-----~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~ 162 (371)
.+..+.+++.. +.|+..+ ++. +....++++++..+ .+.++-++.. |... ..++.+.++|++.+.++.-.
T Consensus 18 ~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~-d~p~--~~~~~~~~aGad~i~vh~~~ 93 (218)
T 3jr2_A 18 LTDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTT-DGGA--ILSRMAFEAGADWITVSAAA 93 (218)
T ss_dssp HHHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEEC-SCHH--HHHHHHHHHTCSEEEEETTS
T ss_pred HHHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeec-ccHH--HHHHHHHhcCCCEEEEecCC
Confidence 34456777765 4456544 331 12223456666543 3555555554 3322 25677888999988764210
Q ss_pred CCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEE--EccCHH
Q 017434 163 PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK--GVLTAE 240 (371)
Q Consensus 163 p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK--~v~~~e 240 (371)
+ .....+.++.+++. +.+..+. ++.|++
T Consensus 94 ~-------------------------------------------------~~~~~~~~~~~~~~-g~~~~~d~l~~~T~~ 123 (218)
T 3jr2_A 94 H-------------------------------------------------IATIAACKKVADEL-NGEIQIEIYGNWTMQ 123 (218)
T ss_dssp C-------------------------------------------------HHHHHHHHHHHHHH-TCEEEEECCSSCCHH
T ss_pred C-------------------------------------------------HHHHHHHHHHHHHh-CCccceeeeecCCHH
Confidence 0 00011234445443 5555432 236788
Q ss_pred HHHHHHHhCCCEEEEeCCCCc-CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhh
Q 017434 241 DASLAIQYGAAGIIVSNHGAR-QLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSL 319 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~~gg~-~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~ 319 (371)
+++.+.+.|+|++.+... .. +..+.....+.+..+++..+.++|++++|||+ .+++.+++++|||.|.+||++..+
T Consensus 124 ~~~~~~~~g~d~v~~~~~-~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~-~~~~~~~~~aGAd~vvvGsaI~~a- 200 (218)
T 3jr2_A 124 DAKAWVDLGITQAIYHRS-RDAELAGIGWTTDDLDKMRQLSALGIELSITGGIV-PEDIYLFEGIKTKTFIAGRALAGA- 200 (218)
T ss_dssp HHHHHHHTTCCEEEEECC-HHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCEEEEEESGGGSHH-
T ss_pred HHHHHHHcCccceeeeec-cccccCCCcCCHHHHHHHHHHhCCCCCEEEECCCC-HHHHHHHHHcCCCEEEEchhhcCC-
Confidence 899999999999877321 00 00111112334444444432379999999995 899999999999999999987643
Q ss_pred hcCChHHHHHHHHHHHHHHH
Q 017434 320 AVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 320 ~~~G~~gv~~~l~~l~~el~ 339 (371)
+-..+.+ .++++++
T Consensus 201 -----~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 201 -----EGQQTAA-ALREQID 214 (218)
T ss_dssp -----HHHHHHH-HHHHHHH
T ss_pred -----CCHHHHH-HHHHHHH
Confidence 2233344 5555554
No 126
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.28 E-value=8.8e-06 Score=76.13 Aligned_cols=100 Identities=22% Similarity=0.246 Sum_probs=70.2
Q ss_pred CHHHHHHHHhhcCCCEEEEEcc-------CHHHHHHHHHhCCCEEEEeCC---------------CC---------cC--
Q 017434 216 NWKDVKWLQTITSLPILVKGVL-------TAEDASLAIQYGAAGIIVSNH---------------GA---------RQ-- 262 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~-------~~e~a~~a~~~Gad~I~vs~~---------------gg---------~~-- 262 (371)
..+.++++|+..++|+++=+-. ....++.+.++|+|++++-.- |- ..
T Consensus 79 ~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~e 158 (271)
T 1ujp_A 79 ALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDA 158 (271)
T ss_dssp HHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHH
T ss_pred HHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHH
Confidence 3577999999889999873211 134578899999998887321 10 00
Q ss_pred -----------------C--CCc------cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 263 -----------------L--DYV------PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 263 -----------------~--~~~------~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
. ..| .+..+.+.++++.. ++||++.|||++++++.++ .|||+|.+|+++..
T Consensus 159 ri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~ 234 (271)
T 1ujp_A 159 RIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVR 234 (271)
T ss_dssp HHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHH
T ss_pred HHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhc
Confidence 0 001 11135566666654 7999999999999999996 99999999999987
Q ss_pred hh
Q 017434 318 SL 319 (371)
Q Consensus 318 ~~ 319 (371)
..
T Consensus 235 ~~ 236 (271)
T 1ujp_A 235 AL 236 (271)
T ss_dssp HH
T ss_pred cc
Confidence 64
No 127
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.27 E-value=2.2e-05 Score=70.51 Aligned_cols=92 Identities=15% Similarity=0.196 Sum_probs=56.1
Q ss_pred HHHHHHHHhCCCEEEEeC-C-CCcCCCCccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchh
Q 017434 240 EDASLAIQYGAAGIIVSN-H-GARQLDYVPATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 314 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~-~-gg~~~~~~~~~~~~l~~i~~~~~---~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~ 314 (371)
.+.......++|+|.+.. + |.......+..++.+.++++... .++|++++|||+ .+++.+++.+|||+|.+||+
T Consensus 122 ~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsa 200 (220)
T 2fli_A 122 ATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSY 200 (220)
T ss_dssp GGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHH
T ss_pred HHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChH
Confidence 333333445678775522 2 11111122334455566655442 268999999999 89999999999999999999
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHH
Q 017434 315 VPFSLAVDGEAGVRKVLQMLRDEF 338 (371)
Q Consensus 315 ~l~~~~~~G~~gv~~~l~~l~~el 338 (371)
++.+ .. ..+.++.+++++
T Consensus 201 i~~~---~d---~~~a~~~~~~~~ 218 (220)
T 2fli_A 201 LFKA---SD---LVSQVQTLRTAL 218 (220)
T ss_dssp HHTS---SC---HHHHHHHHHHHH
T ss_pred HhCC---CC---HHHHHHHHHHHh
Confidence 8753 11 334555555543
No 128
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.26 E-value=2.4e-05 Score=72.79 Aligned_cols=85 Identities=29% Similarity=0.464 Sum_probs=64.3
Q ss_pred HhhcCCCEEEEEcc---------CHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017434 224 QTITSLPILVKGVL---------TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 224 r~~~~~pv~vK~v~---------~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~G 290 (371)
.+.+++|+++=.-. +++. ++.+.++|+|+|.++.. .+.+.+.++++.+ +.+||+++|
T Consensus 134 ~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~---------~~~e~~~~~~~~~-~~~pV~asG 203 (263)
T 1w8s_A 134 AVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT---------GDPKTFSWAVKVA-GKVPVLMSG 203 (263)
T ss_dssp HHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC---------SSHHHHHHHHHHT-TTSCEEEEC
T ss_pred HHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhC-CCCeEEEEe
Confidence 33458888764323 4443 46788999999999731 2457788888777 335999999
Q ss_pred CCC--CHHHHHHHH----HcCCCEEEEchhHHHh
Q 017434 291 GVR--RGTDVFKAL----ALGASGVFVGRPVPFS 318 (371)
Q Consensus 291 GI~--~~~dv~kal----~lGAd~V~iGr~~l~~ 318 (371)
||+ +.+|+++.+ +.||+++.+||.++..
T Consensus 204 Gi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 204 GPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp CSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 999 889888777 8999999999998753
No 129
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=98.24 E-value=8.8e-06 Score=76.11 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=62.7
Q ss_pred CCHHHHHHHHhhcCCCEEEEEcc-----C-HH----HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh----
Q 017434 215 LNWKDVKWLQTITSLPILVKGVL-----T-AE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA---- 280 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v~-----~-~e----~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---- 280 (371)
...++|+.+++.++ +..+|.+. + .| -++.+.++|+|+|..|+.-+ .+..+++.+..+++.+
T Consensus 142 ~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~----~~gAT~edv~lm~~~v~~~~ 216 (281)
T 2a4a_A 142 EATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKV----QINATPSSVEYIIKAIKEYI 216 (281)
T ss_dssp HHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCS----SCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHHHhh
Confidence 35678899998875 34678763 3 33 14678899999999985311 1234444444444443
Q ss_pred ------cCCCcEEEecCCCCHHHHHHHHHcCCC
Q 017434 281 ------KGRVPVFLDGGVRRGTDVFKALALGAS 307 (371)
Q Consensus 281 ------~~~i~via~GGI~~~~dv~kal~lGAd 307 (371)
+.+++|-++|||++.+|+++++.+||+
T Consensus 217 ~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 217 KNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred cccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 568999999999999999999999887
No 130
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.21 E-value=1.6e-05 Score=70.94 Aligned_cols=79 Identities=23% Similarity=0.245 Sum_probs=62.5
Q ss_pred ccCHHHHHHHHHhCCCEEEEeCC--CCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 236 VLTAEDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 236 v~~~e~a~~a~~~Gad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
+.+++++..+.+.|+|+|.+++. ++......+..++.+.++++.. ++||++.|||. ++++.+++.+||++|.+|+
T Consensus 115 ~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 115 VYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESH
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhH
Confidence 46788888899999999998651 1111112345678888888776 79999999999 9999999999999999999
Q ss_pred hHHH
Q 017434 314 PVPF 317 (371)
Q Consensus 314 ~~l~ 317 (371)
.++.
T Consensus 192 ~i~~ 195 (215)
T 1xi3_A 192 AVMG 195 (215)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9874
No 131
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.21 E-value=5.3e-06 Score=75.50 Aligned_cols=92 Identities=15% Similarity=0.086 Sum_probs=69.4
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccc-hHHHHHHHHHHhcCCCcEEEecCC
Q 017434 214 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~via~GGI 292 (371)
..+.+ +...++..+.|++. ++.|++++..+.++|+|+|.++. . ... ..+.|..++..++ ++|+++.|||
T Consensus 106 ~~d~~-v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~vk~FP--a-----~~~~G~~~lk~i~~~~~-~ipvvaiGGI 175 (225)
T 1mxs_A 106 GITED-ILEAGVDSEIPLLP-GISTPSEIMMGYALGYRRFKLFP--A-----EISGGVAAIKAFGGPFG-DIRFCPTGGV 175 (225)
T ss_dssp SCCHH-HHHHHHHCSSCEEC-EECSHHHHHHHHTTTCCEEEETT--H-----HHHTHHHHHHHHHTTTT-TCEEEEBSSC
T ss_pred CCCHH-HHHHHHHhCCCEEE-eeCCHHHHHHHHHCCCCEEEEcc--C-----ccccCHHHHHHHHhhCC-CCeEEEECCC
Confidence 34434 44555557888876 58999999999999999999932 1 011 2566777766654 7999999999
Q ss_pred CCHHHHHHHHH-cCCCEEEEchhHHH
Q 017434 293 RRGTDVFKALA-LGASGVFVGRPVPF 317 (371)
Q Consensus 293 ~~~~dv~kal~-lGAd~V~iGr~~l~ 317 (371)
. .+++.++++ .|+++|. |+.++-
T Consensus 176 ~-~~N~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 176 N-PANVRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp C-TTTHHHHHHSTTBCCEE-ECTTSC
T ss_pred C-HHHHHHHHhccCCEEEE-EchhcC
Confidence 5 789999999 6999999 887764
No 132
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.20 E-value=3.2e-06 Score=78.67 Aligned_cols=74 Identities=12% Similarity=0.167 Sum_probs=59.1
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC--CCcEEEecCCCCHHHHHHHHHc--CCCEEEEchhH
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG--RVPVFLDGGVRRGTDVFKALAL--GASGVFVGRPV 315 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~i~via~GGI~~~~dv~kal~l--GAd~V~iGr~~ 315 (371)
+-++.+.++ ++.|.++....-+...|+ .++.+.++++.++. ++|||++|||++.+|+.+++.+ |+++|++||++
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 778999999 999999543221222344 89999999988732 5999999999999999999998 99999999997
No 133
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.20 E-value=6e-06 Score=75.86 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=61.1
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.++.+.++|+|.|.++...+.. ......++.+.++++.+ ++||+++|||++.+|+.++++.|||+|++|+.++.
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDG-TKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTT-CSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCccc-CCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 466888999999999986532111 11234678888888776 79999999999999999999999999999998763
No 134
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=98.18 E-value=1.1e-05 Score=73.69 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=63.5
Q ss_pred CHHHHHHHHhhc---CCCEEEEEc-----cCHHH----HHHHHHhCCCEEEEeCCCCcCCCC-ccchHHHHHH--HHHHh
Q 017434 216 NWKDVKWLQTIT---SLPILVKGV-----LTAED----ASLAIQYGAAGIIVSNHGARQLDY-VPATVMALEE--VVQAA 280 (371)
Q Consensus 216 ~~~~i~~ir~~~---~~pv~vK~v-----~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~-~~~~~~~l~~--i~~~~ 280 (371)
..+++..+++.+ +.|+ |.+ ++.++ ++.+.++|+|.|+.|...+ . +..+.+.+.. +++.+
T Consensus 118 v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~----~~~gAt~~dv~l~~m~~~v 191 (234)
T 1n7k_A 118 VYREVSGIVKLAKSYGAVV--KVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVY----TKGGDPVTVFRLASLAKPL 191 (234)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSS----CCCCSHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCCHHHHHHHHHHHHH
Confidence 345666666654 4554 765 35544 5678899999999985311 1 3455555555 66666
Q ss_pred cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 281 KGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 281 ~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
+ +||.++|||++.+|+++.+.+||+-++..+
T Consensus 192 ~--v~VKaaGGirt~~~al~~i~aGa~RiG~S~ 222 (234)
T 1n7k_A 192 G--MGVKASGGIRSGIDAVLAVGAGADIIGTSS 222 (234)
T ss_dssp T--CEEEEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred C--CCEEEecCCCCHHHHHHHHHcCccccchHH
Confidence 4 999999999999999999999999555443
No 135
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=98.18 E-value=8.9e-06 Score=75.41 Aligned_cols=91 Identities=23% Similarity=0.245 Sum_probs=63.9
Q ss_pred cCCCHHHHHHHHhhcC-CCEEEEEcc-----C-HH----HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHH--
Q 017434 213 RSLNWKDVKWLQTITS-LPILVKGVL-----T-AE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQA-- 279 (371)
Q Consensus 213 ~~~~~~~i~~ir~~~~-~pv~vK~v~-----~-~e----~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~-- 279 (371)
.....++|+.+++.++ .+..+|.+. + .| -++.+.++|+|+|..|+.-+ .+..+.+.+..+++.
T Consensus 116 ~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~----~~gAt~e~v~lm~~~I~ 191 (260)
T 1p1x_A 116 EQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKV----AVNATPESARIMMEVIR 191 (260)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCS----SCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHH
Confidence 3345677888888763 245678762 3 33 24678899999999985311 123455544444444
Q ss_pred ---hcCCCcEEEecCCCCHHHHHHHHHcCCC
Q 017434 280 ---AKGRVPVFLDGGVRRGTDVFKALALGAS 307 (371)
Q Consensus 280 ---~~~~i~via~GGI~~~~dv~kal~lGAd 307 (371)
++.+++|-++|||++.+|+++++.+||+
T Consensus 192 ~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 192 DMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp HHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred HhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 4458999999999999999999999887
No 136
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.16 E-value=1.8e-05 Score=72.10 Aligned_cols=137 Identities=19% Similarity=0.225 Sum_probs=92.5
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEec-CCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTV-DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtv-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
..|...+.+.+++++++|++.+-+.+ |.++. | +.
T Consensus 13 a~D~~~l~~~i~~~~~~Gad~ihldi~DG~fv-------------p--------------------------------~~ 47 (230)
T 1tqj_A 13 SADFSRLGEEIKAVDEAGADWIHVDVMDGRFV-------------P--------------------------------NI 47 (230)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSS-------------S--------------------------------CB
T ss_pred ecCHhHHHHHHHHHHHcCCCEEEEEEEecCCC-------------c--------------------------------ch
Confidence 45777778899999999999875543 11110 1 11
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEc-cCHH-HHHHHHHhCCCEEEEeCC--CCcC---------------------------
Q 017434 214 SLNWKDVKWLQTITSLPILVKGV-LTAE-DASLAIQYGAAGIIVSNH--GARQ--------------------------- 262 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v-~~~e-~a~~a~~~Gad~I~vs~~--gg~~--------------------------- 262 (371)
.+..+.++.+|+.++.|+.+-.. .+++ .++.+.++|+|+|+++.. ....
T Consensus 48 ~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~ 127 (230)
T 1tqj_A 48 TIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDF 127 (230)
T ss_dssp CBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGG
T ss_pred hhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHH
Confidence 22347788888887778775443 3432 367788889999988532 1100
Q ss_pred -------CC---------------CccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 263 -------LD---------------YVPATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 263 -------~~---------------~~~~~~~~l~~i~~~~~---~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.| ..+..++.+.++++... .++||.++|||.. +++.+..++|||.+.+||.++.
T Consensus 128 ~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 128 LEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp GTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred HHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 00 01234566777776652 2699999999996 9999999999999999998774
No 137
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.16 E-value=4.7e-05 Score=68.99 Aligned_cols=168 Identities=14% Similarity=0.116 Sum_probs=100.1
Q ss_pred HHHHHHHHHcCCcEE-ecC----C---CCCCHH---HHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecC-
Q 017434 94 CATARAASAAGTIMT-LSS----W---ATSSVE---EVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVD- 161 (371)
Q Consensus 94 ~~~a~aa~~~G~~~~-~s~----~---~~~~~e---ei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd- 161 (371)
...++++.+.|+.++ +.. + ....++ ++++..+.+..+-+|.+ |++ +.++.+.++|++.+.++.+
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn-d~~---~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIV-EPD---QRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESS-SHH---HHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEec-CHH---HHHHHHHHcCCCEEEEEecC
Confidence 467788888887533 321 1 123344 44444444667777763 433 5677778899999876532
Q ss_pred -CCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-cCH
Q 017434 162 -TPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTA 239 (371)
Q Consensus 162 -~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-~~~ 239 (371)
.+ +...+.++.+++. +..+++-.. .++
T Consensus 102 ~~~--------------------------------------------------~~~~~~~~~~~~~-g~~ig~~~~p~t~ 130 (230)
T 1rpx_A 102 SST--------------------------------------------------IHLHRTINQIKSL-GAKAGVVLNPGTP 130 (230)
T ss_dssp TTC--------------------------------------------------SCHHHHHHHHHHT-TSEEEEEECTTCC
T ss_pred ccc--------------------------------------------------hhHHHHHHHHHHc-CCcEEEEeCCCCC
Confidence 10 0112445666553 444443222 234
Q ss_pred HHHHHHHHhCCCEEEEeCC--CCcCCCCccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchh
Q 017434 240 EDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 314 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~---~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~ 314 (371)
.+.......++|+|.+... |.......+..++.+.++++..+ .++|++++|||+ .+++.+++.+|||+|.+||+
T Consensus 131 ~e~~~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSa 209 (230)
T 1rpx_A 131 LTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSA 209 (230)
T ss_dssp GGGGTTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHH
T ss_pred HHHHHHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChh
Confidence 4444445578998855432 21111112334555666666542 268999999999 89999999999999999999
Q ss_pred HHH
Q 017434 315 VPF 317 (371)
Q Consensus 315 ~l~ 317 (371)
+..
T Consensus 210 I~~ 212 (230)
T 1rpx_A 210 VFG 212 (230)
T ss_dssp HHT
T ss_pred hhC
Confidence 874
No 138
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.12 E-value=9.5e-06 Score=74.57 Aligned_cols=108 Identities=24% Similarity=0.322 Sum_probs=80.7
Q ss_pred CceEEEEeec-------CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCC
Q 017434 126 GIRFFQLYVT-------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKT 198 (371)
Q Consensus 126 ~~~~~QLy~~-------~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~ 198 (371)
+..|++|+.- .|...+.+..++.++.|++.+.++.|.|..++|..++...+-.|.. ..
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg---------------~p 166 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLA---------------GL 166 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECS---------------SS
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCC---------------cc
Confidence 5569999876 6777777788888888999998889999998888776433222210 00
Q ss_pred CcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEE-EccCHHHHHHHHHhCCCEEEEeC
Q 017434 199 DDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK-GVLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK-~v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
.++ ...-.+++.|+.+++..++||++. ++.+++++..++++|+|+|.|..
T Consensus 167 IGs---------G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 167 IGS---------GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp TTC---------CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred CCC---------CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 111 111136888999999889999998 47899999999999999999853
No 139
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.12 E-value=1.6e-05 Score=73.06 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=78.5
Q ss_pred CCHHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeCC---------------C-------------------
Q 017434 215 LNWKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSNH---------------G------------------- 259 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~~---------------g------------------- 259 (371)
...+.++.+.+.+.+|+.+.+ +.+.++++.++++|+|.|++... |
T Consensus 62 ~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~ 141 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVA 141 (243)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC
T ss_pred hHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEE
Confidence 356889999999999999997 57899999999999999998521 1
Q ss_pred ---CcC---------------------------CCC--ccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCC
Q 017434 260 ---ARQ---------------------------LDY--VPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGAS 307 (371)
Q Consensus 260 ---g~~---------------------------~~~--~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd 307 (371)
++. .|+ ..+.++.+..+.+.++ ++|||++||+++.+|+.+ +..+++
T Consensus 142 ~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~~-~ipviasGGv~~~~Dl~~-l~~~~~ 219 (243)
T 4gj1_A 142 VNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFP-NICIQASGGVASLKDLEN-LKGICS 219 (243)
T ss_dssp --------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHHHHHHCT-TSEEEEESCCCSHHHHHH-TTTTCS
T ss_pred ecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHHHHHhcC-CCCEEEEcCCCCHHHHHH-HHccCc
Confidence 100 011 1246677777777653 699999999999999976 466799
Q ss_pred EEEEchhHHHh
Q 017434 308 GVFVGRPVPFS 318 (371)
Q Consensus 308 ~V~iGr~~l~~ 318 (371)
+|.+|++++++
T Consensus 220 gvivg~Al~~g 230 (243)
T 4gj1_A 220 GVIVGKALLDG 230 (243)
T ss_dssp EEEECHHHHTT
T ss_pred hhehHHHHHCC
Confidence 99999999764
No 140
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.08 E-value=0.00022 Score=64.65 Aligned_cols=113 Identities=14% Similarity=0.158 Sum_probs=72.0
Q ss_pred HHHHHHHhhcCCCEEEEEc-cCH-HHHHHHHHh--CCCEEEEeC-CCCc-CCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017434 218 KDVKWLQTITSLPILVKGV-LTA-EDASLAIQY--GAAGIIVSN-HGAR-QLDYVPATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v-~~~-e~a~~a~~~--Gad~I~vs~-~gg~-~~~~~~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
+.++.+++. +.++++-.- .++ +..+...+. ++|+|.+.. ++|. .....+..++.+.++++..+ ++||+++||
T Consensus 104 ~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~-~~pi~v~GG 181 (228)
T 1h1y_A 104 ELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP-SLDIEVDGG 181 (228)
T ss_dssp HHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TSEEEEESS
T ss_pred HHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 456667654 566654432 233 334444444 999998853 2221 11223445667777777653 689999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
|.. +++.+++..|||.+.+||.++.+ .. ..+.++.|++.++
T Consensus 182 I~~-~ni~~~~~aGaD~vvvGsai~~~---~d---~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 182 LGP-STIDVAASAGANCIVAGSSIFGA---AE---PGEVISALRKSVE 222 (228)
T ss_dssp CST-TTHHHHHHHTCCEEEESHHHHTS---SC---HHHHHHHHHHHHH
T ss_pred cCH-HHHHHHHHcCCCEEEECHHHHCC---CC---HHHHHHHHHHHHH
Confidence 986 89999999999999999998742 12 3345555555444
No 141
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.04 E-value=7.2e-05 Score=69.01 Aligned_cols=146 Identities=15% Similarity=0.121 Sum_probs=87.9
Q ss_pred CceEEEEeecCChH-HHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhh
Q 017434 126 GIRFFQLYVTKHRN-VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 204 (371)
Q Consensus 126 ~~~~~QLy~~~d~~-~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (371)
.|.++--|.+.-.. -.++.+++++++|++.+++ .|.|..
T Consensus 89 ~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~Ii-pDLP~e--------------------------------------- 128 (252)
T 3tha_A 89 KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIV-PELSFE--------------------------------------- 128 (252)
T ss_dssp SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEEC-TTCCGG---------------------------------------
T ss_pred CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEe-CCCCHH---------------------------------------
Confidence 46666666531111 2577899999999999875 443320
Q ss_pred hHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc--cCHHHHHHHHHhCCCEEEEeCCCCcC-CCCc--cchHHHHHHHHHH
Q 017434 205 SYVANQIDRSLNWKDVKWLQTITSLPILVKGV--LTAEDASLAIQYGAAGIIVSNHGARQ-LDYV--PATVMALEEVVQA 279 (371)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v--~~~e~a~~a~~~Gad~I~vs~~gg~~-~~~~--~~~~~~l~~i~~~ 279 (371)
.. +.+....+..++.++.=.. .+.+.++...+.+-..|.+..+-|.+ .... ....+.+.++++.
T Consensus 129 ----------E~-~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~ 197 (252)
T 3tha_A 129 ----------ES-DDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSF 197 (252)
T ss_dssp ----------GC-HHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTT
T ss_pred ----------HH-HHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHh
Confidence 01 2233333444554332222 33677777777766666654332211 1111 1123445666555
Q ss_pred hcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChH
Q 017434 280 AKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEA 325 (371)
Q Consensus 280 ~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~ 325 (371)
. ++||++.+||++++++.++.. +||+|.+|++++..+...+.+
T Consensus 198 ~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~~ 240 (252)
T 3tha_A 198 T--NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKCFKQGNLD 240 (252)
T ss_dssp C--CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHHHTTSSCHH
T ss_pred c--CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHHHHHhcCHH
Confidence 3 799999999999999987755 699999999999876544444
No 142
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.95 E-value=0.00019 Score=63.30 Aligned_cols=146 Identities=15% Similarity=0.105 Sum_probs=97.7
Q ss_pred ceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhH
Q 017434 127 IRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY 206 (371)
Q Consensus 127 ~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (371)
..+|=|+ .+-..+.+.+++++++|- -++|++|... |+ +. ...+-+|
T Consensus 31 ~~ifll~--g~i~~l~~~v~~lk~~~K-~v~Vh~Dli~----------Gl------s~---------------d~~ai~f 76 (192)
T 3kts_A 31 TYMVMLE--THVAQLKALVKYAQAGGK-KVLLHADLVN----------GL------KN---------------DDYAIDF 76 (192)
T ss_dssp CEEEECS--EETTTHHHHHHHHHHTTC-EEEEEGGGEE----------TC------CC---------------SHHHHHH
T ss_pred CEEEEec--CcHHHHHHHHHHHHHcCC-eEEEecCchh----------cc------CC---------------cHHHHHH
Confidence 4555555 466778899999999995 5556887532 11 10 0112234
Q ss_pred hhhhcccCC----CHHHHHHHHhhcCCCEEEEEc----cCHH-HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHH
Q 017434 207 VANQIDRSL----NWKDVKWLQTITSLPILVKGV----LTAE-DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV 277 (371)
Q Consensus 207 ~~~~~~~~~----~~~~i~~ir~~~~~pv~vK~v----~~~e-~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~ 277 (371)
+....+++. ....++..++. ++..+-+.- .+.+ ..+...+..+|+|-+- ++ +. ...+.+++
T Consensus 77 L~~~~~pdGIIsTk~~~i~~Ak~~-gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL-------PG-i~-p~iI~~i~ 146 (192)
T 3kts_A 77 LCTEICPDGIISTRGNAIMKAKQH-KMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL-------PG-II-PEQVQKMT 146 (192)
T ss_dssp HHHTTCCSEEEESCHHHHHHHHHT-TCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE-------CT-TC-HHHHHHHH
T ss_pred HHhCCCCCEEEeCcHHHHHHHHHC-CCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC-------Cc-hh-HHHHHHHH
Confidence 433223332 23456666654 676665642 1222 3456677789999873 22 22 26888888
Q ss_pred HHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 278 QAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 278 ~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
+.+ ++|||+.|+|++.+|+.+++.+||++|..++..+|.
T Consensus 147 ~~~--~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 147 QKL--HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp HHH--CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred Hhc--CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 887 799999999999999999999999999999999994
No 143
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.95 E-value=0.00017 Score=68.09 Aligned_cols=82 Identities=24% Similarity=0.322 Sum_probs=57.6
Q ss_pred HhhcCCCEEEEEc------cCHH----HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 224 QTITSLPILVKGV------LTAE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 224 r~~~~~pv~vK~v------~~~e----~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
.+.+++|+++=.- .+++ .++.+.++|+|.|.++-.+ +.+.++.+.. ++||++.||+.
T Consensus 167 a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~-----------e~~~~vv~~~--~vPVv~~GG~~ 233 (295)
T 3glc_A 167 GMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE-----------KGFERIVAGC--PVPIVIAGGKK 233 (295)
T ss_dssp HHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT-----------TTHHHHHHTC--SSCEEEECCSC
T ss_pred HHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH-----------HHHHHHHHhC--CCcEEEEECCC
Confidence 3345789887211 2333 4678899999999996221 2356666554 79999999999
Q ss_pred CH-H----HHHHHHHcCCCEEEEchhHHHh
Q 017434 294 RG-T----DVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 294 ~~-~----dv~kal~lGAd~V~iGr~~l~~ 318 (371)
.. + .+.+++.+||++|.+||.++..
T Consensus 234 ~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 234 LPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 53 3 4556668999999999988753
No 144
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.95 E-value=0.00022 Score=65.00 Aligned_cols=118 Identities=17% Similarity=0.150 Sum_probs=78.3
Q ss_pred CHHHHHHHHhhcCCCEEEEE-ccCHHH-HHHHHHhCCCEEEEeCCC-CcC------------------------------
Q 017434 216 NWKDVKWLQTITSLPILVKG-VLTAED-ASLAIQYGAAGIIVSNHG-ARQ------------------------------ 262 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~-v~~~e~-a~~a~~~Gad~I~vs~~g-g~~------------------------------ 262 (371)
-...++.+|+.++.|+.+-. +.+++. ++.+.++|||+|+++... ...
T Consensus 45 G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~ 124 (231)
T 3ctl_A 45 SPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKY 124 (231)
T ss_dssp CHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTT
T ss_pred cHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHH
Confidence 35678999988888877765 345544 788889999999875321 100
Q ss_pred ----CC-----------C----ccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEc-hhHHHhh
Q 017434 263 ----LD-----------Y----VPATVMALEEVVQAAK---GRVPVFLDGGVRRGTDVFKALALGASGVFVG-RPVPFSL 319 (371)
Q Consensus 263 ----~~-----------~----~~~~~~~l~~i~~~~~---~~i~via~GGI~~~~dv~kal~lGAd~V~iG-r~~l~~~ 319 (371)
.| + .+..++-+.++++... .+++|.++|||. .+.+.++.++|||.+.+| |.++.+
T Consensus 125 ~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~- 202 (231)
T 3ctl_A 125 YIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNH- 202 (231)
T ss_dssp TGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGG-
T ss_pred HHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCC-
Confidence 00 1 1335566666666542 268999999998 788999999999999999 776532
Q ss_pred hcCChHHHHHHHHHHHHHHH
Q 017434 320 AVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 320 ~~~G~~gv~~~l~~l~~el~ 339 (371)
... ..+.++.|++.++
T Consensus 203 --~d~--~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 203 --AEN--IDEAWRIMTAQIL 218 (231)
T ss_dssp --CSS--HHHHHHHHHHHHH
T ss_pred --CCc--HHHHHHHHHHHHH
Confidence 120 3345556655554
No 145
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.91 E-value=5e-05 Score=69.60 Aligned_cols=75 Identities=15% Similarity=0.180 Sum_probs=58.5
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+.++.+.++|+|.|.++.-.+.. ......++.+.++++.+ ++||++.|||++.+++.++++.|||+|.+|+..+.
T Consensus 34 ~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 34 ELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 55788889999999997532211 11233556677777655 79999999999999999999999999999998764
No 146
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.91 E-value=5.2e-05 Score=69.48 Aligned_cols=76 Identities=24% Similarity=0.222 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.++.+.++|+|.|.++..... .......++.+.++++.+ ++||++.|||++.+++.+++++|||+|.+|+..+.
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISAT-HEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSS-TTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCcc-ccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 35678888999999998743211 011233556677777665 79999999999999999999999999999998774
No 147
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.84 E-value=0.00011 Score=66.67 Aligned_cols=77 Identities=25% Similarity=0.255 Sum_probs=60.9
Q ss_pred CHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 238 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 238 ~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
..+.++.+.++|+|+|.++...+.. ...+..++.+.++++.+ ++||++.|||++.+++.+++++|||+|.+|++.+.
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 3567888999999999997532211 12233566778888776 79999999999999999999999999999998763
No 148
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.80 E-value=0.00014 Score=68.61 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=69.3
Q ss_pred HHHHHHHhhcCC-CEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 218 KDVKWLQTITSL-PILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 218 ~~i~~ir~~~~~-pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
+.++.+++..+. ++.+ .+-+.++++.+.++|+|+|.++|. +.+.+.++++.+.++++|.++||| +.+
T Consensus 197 ~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~~----------~~e~l~~~v~~~~~~~~I~ASGGI-t~~ 264 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDNF----------NTDQMREAVKRVNGQARLEVSGNV-TAE 264 (296)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESSC----------CHHHHHHHHHTTCTTCCEEECCCS-CHH
T ss_pred HHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCC-CHH
Confidence 557888887643 4554 456789999999999999999762 345666666666667999999999 899
Q ss_pred HHHHHHHcCCCEEEEchhH
Q 017434 297 DVFKALALGASGVFVGRPV 315 (371)
Q Consensus 297 dv~kal~lGAd~V~iGr~~ 315 (371)
++.+..+.|+|.+.+|+..
T Consensus 265 ~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 265 TLREFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHcCCCEEEEeHHH
Confidence 9999999999999999954
No 149
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.80 E-value=6.3e-05 Score=70.34 Aligned_cols=88 Identities=16% Similarity=0.117 Sum_probs=68.2
Q ss_pred HHHHHHHHhhcC--CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc---CCCcEEEecC
Q 017434 217 WKDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFLDGG 291 (371)
Q Consensus 217 ~~~i~~ir~~~~--~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~via~GG 291 (371)
.+.++.+++..+ .++.+ .+.+.++++.+.++|+|+|.+++.+ .+.+.++++.+. .+++|.++||
T Consensus 169 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~~~~i~AsGG 237 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNLS----------VLETKEIAAYRDAHYPFVLLEASGN 237 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETCC----------HHHHHHHHHHHHHHCTTCEEEEESS
T ss_pred HHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhhccCCCcEEEEECC
Confidence 356888888775 35555 5678899999999999999998731 244444444432 2599999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
| +.+++.+..+.|||.+.+|+.+.
T Consensus 238 I-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 238 I-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp C-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred C-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 9 79999999999999999999754
No 150
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.77 E-value=0.00022 Score=63.24 Aligned_cols=75 Identities=19% Similarity=0.111 Sum_probs=50.6
Q ss_pred CHHH-HHHHHHhCCCEEEEeCCCCcCCCCccchH-HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 238 TAED-ASLAIQYGAAGIIVSNHGARQLDYVPATV-MALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 238 ~~e~-a~~a~~~Gad~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
++++ ++.+.+.|+|+|.+... ......+.... +.+.++... ++|++++|||+ .+++.++++.|||.|.+||++
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~-~~~~~~g~~~~~~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAG-LDEQAKPGFDLNGLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECC-HHHHTSTTCCTHHHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHH
T ss_pred ChHHHHHHHHHhCCCEEEEEec-ccccccCCCchHHHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeec
Confidence 5555 67777889999955421 00000111112 344444332 58999999998 889999999999999999998
Q ss_pred HH
Q 017434 316 PF 317 (371)
Q Consensus 316 l~ 317 (371)
+.
T Consensus 190 ~~ 191 (207)
T 3ajx_A 190 YG 191 (207)
T ss_dssp HT
T ss_pred cC
Confidence 75
No 151
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=97.75 E-value=0.0049 Score=55.60 Aligned_cols=184 Identities=15% Similarity=0.122 Sum_probs=120.9
Q ss_pred HhHHHHHHHHHcCCcEEecCCC---------CCCH----HHHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEE
Q 017434 92 GECATARAASAAGTIMTLSSWA---------TSSV----EEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (371)
Q Consensus 92 ~e~~~a~aa~~~G~~~~~s~~~---------~~~~----eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~v 158 (371)
.|+.-.+.+.+.|..-.++|.. .... .||++..+++..+|+.. .|.+.+.+..++..+.+-. ++|
T Consensus 8 An~~ei~~~~~~g~i~GVTTNPsli~k~~~~g~~~~~~~~ei~~~v~G~Vs~EV~a-~d~e~mi~eA~~L~~~~~n-v~I 85 (223)
T 3s1x_A 8 ANIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVVS-TKYEGMVEEARKIHGLGDN-AVV 85 (223)
T ss_dssp CCHHHHHHHHHHTCCCEEECCHHHHHHHSCTTCCHHHHHHHHHHHCSSCEEEECCC-CSHHHHHHHHHHHHHTCTT-EEE
T ss_pred CCHHHHHHHHhcCCcccccCCHHHHHhhhccCCCHHHHHHHHHHhCCCCEEEEEcc-CCHHHHHHHHHHHHHhCCC-EEE
Confidence 3667778888889877776642 2233 34555667788888874 5666665555555555422 222
Q ss_pred ecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHH---HHHHHhhcCCCEEEEE
Q 017434 159 TVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD---VKWLQTITSLPILVKG 235 (371)
Q Consensus 159 tvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~ir~~~~~pv~vK~ 235 (371)
-+ | .+|+= ++.+.+. ++++-+=.
T Consensus 86 KI------------------P-----------------------------------~T~eGl~A~~~L~~~-GI~vn~Tl 111 (223)
T 3s1x_A 86 KI------------------P-----------------------------------MTEDGLRAIKTLSSE-HINTNCTL 111 (223)
T ss_dssp EE------------------E-----------------------------------SSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred Ee------------------C-----------------------------------CCHHHHHHHHHHHHC-CCcEEEEE
Confidence 11 1 13333 4444443 88998888
Q ss_pred ccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 236 VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA---KGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 236 v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
+.+...|..|.++|+++|.. .-||-.|++.+....+.++.+.+ +.+..|++ ..+|+..++.++..+|||.+-+.
T Consensus 112 ifS~~QA~~Aa~AGa~yISP--fvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-AS~Rn~~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 112 VFNPIQALLAAKAGVTYVSP--FVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-ASIRNPIHVLRSAVIGADVVTVP 188 (223)
T ss_dssp ECSHHHHHHHHHTTCSEEEE--BSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-BSCCSHHHHHHHHHHTCSEEEEC
T ss_pred eCCHHHHHHHHHcCCeEEEe--ecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-EeCCCHHHHHHHHHcCCCEEEeC
Confidence 99999999999999998876 33454455555666666666554 22455555 55999999999999999999999
Q ss_pred hhHHHhhhcCC--hHHHHHHHHHH
Q 017434 313 RPVPFSLAVDG--EAGVRKVLQML 334 (371)
Q Consensus 313 r~~l~~~~~~G--~~gv~~~l~~l 334 (371)
-.++..+..+- ..|++.+.+.+
T Consensus 189 ~~vl~~l~~hpltd~~~~~F~~Dw 212 (223)
T 3s1x_A 189 FNVLKSLMKHPKTDEGLAKFLEDW 212 (223)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHH
Confidence 88887654321 24555554444
No 152
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=97.74 E-value=0.0052 Score=55.01 Aligned_cols=182 Identities=18% Similarity=0.142 Sum_probs=120.4
Q ss_pred HhHHHHHHHHHcCCcEEecCCC-------CCCH----HHHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEec
Q 017434 92 GECATARAASAAGTIMTLSSWA-------TSSV----EEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (371)
Q Consensus 92 ~e~~~a~aa~~~G~~~~~s~~~-------~~~~----eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtv 160 (371)
.|+.-.+.+.+.|..-.++|.. .... .||++..+++..+|+. ..|.+.+.+..++..+.+-+ ++|-+
T Consensus 8 An~~ei~~~~~~g~i~GVTTNPsli~k~~g~~~~~~~~eI~~~v~G~Vs~EV~-a~d~e~mi~ea~~l~~~~~n-v~IKI 85 (212)
T 3r8r_A 8 ANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVI-SLKAEEMIEEGKELAKIAPN-ITVKI 85 (212)
T ss_dssp CCHHHHHHHHHTTCEEEEECCHHHHHTSCSSCHHHHHHHHHHHCCSCEEEECC-CSSHHHHHHHHHHHHTTCTT-EEEEE
T ss_pred CCHHHHHHHHhcCCcccccCCHHHHHHccCCCHHHHHHHHHHhcCCCEEEEEe-cCCHHHHHHHHHHHHHhCCC-EEEEe
Confidence 3677888899999988887652 2233 3455566788888885 46776665555555544322 22211
Q ss_pred CCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHH---HHHHHhhcCCCEEEEEcc
Q 017434 161 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD---VKWLQTITSLPILVKGVL 237 (371)
Q Consensus 161 d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~ir~~~~~pv~vK~v~ 237 (371)
| .+|+= ++.+.+ -++++-+=.+.
T Consensus 86 ------------------P-----------------------------------~T~eGl~A~~~L~~-~GI~vn~Tlif 111 (212)
T 3r8r_A 86 ------------------P-----------------------------------MTSDGLKAVRALTD-LGIKTNVTLIF 111 (212)
T ss_dssp ------------------E-----------------------------------SSHHHHHHHHHHHH-TTCCEEEEEEC
T ss_pred ------------------C-----------------------------------CCHHHHHHHHHHHH-CCCcEEEEEeC
Confidence 1 23333 444433 38899888899
Q ss_pred CHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchh
Q 017434 238 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA---KGRVPVFLDGGVRRGTDVFKALALGASGVFVGRP 314 (371)
Q Consensus 238 ~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~ 314 (371)
+...|..|.++|+++|.. .-||-.|++.+....+.++.+.+ +.+..|++ -.+|+..++.++..+|||.+-+.-.
T Consensus 112 S~~Qa~~Aa~AGa~yISP--fvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-AS~R~~~~v~~~a~~G~d~~Tip~~ 188 (212)
T 3r8r_A 112 NANQALLAARAGATYVSP--FLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-ASIRHPQHVTEAALRGAHIGTMPLK 188 (212)
T ss_dssp SHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-BSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHcCCeEEEe--ccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-ecCCCHHHHHHHHHcCCCEEEcCHH
Confidence 999999999999999876 33444455556666666666554 22455555 5599999999999999999999888
Q ss_pred HHHhhhcCC--hHHHHHHHH
Q 017434 315 VPFSLAVDG--EAGVRKVLQ 332 (371)
Q Consensus 315 ~l~~~~~~G--~~gv~~~l~ 332 (371)
++..+..+- ..|++.+.+
T Consensus 189 vl~~l~~hpltd~~~~~F~~ 208 (212)
T 3r8r_A 189 VIHALTKHPLTDKGIEQFLA 208 (212)
T ss_dssp HHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHHHHHHH
Confidence 876654321 244544443
No 153
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.74 E-value=0.00046 Score=64.50 Aligned_cols=94 Identities=17% Similarity=0.066 Sum_probs=64.4
Q ss_pred CCHHHHHHHHhhcCCCEEEEEc-----cC-HHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh----
Q 017434 215 LNWKDVKWLQTITSLPILVKGV-----LT-AED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA---- 280 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v-----~~-~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---- 280 (371)
...++|+.+++.++ +..+|.+ ++ .+. ++.+.++|+|+|..|+.-+ .+.++.+.+.-+++.+
T Consensus 136 ~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v~~~~ 210 (297)
T 4eiv_A 136 RIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLG----ATHATMFTVHLISIALREYM 210 (297)
T ss_dssp HHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHHHHHh
Confidence 35577888988885 5678987 33 332 3667899999999986422 2234444444444443
Q ss_pred ------------------cCCCcEEEe-cCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 281 ------------------KGRVPVFLD-GGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 281 ------------------~~~i~via~-GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
++++.|-++ ||||+.+|+.+++.+..+ +|..|+
T Consensus 211 ~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e---lG~~wl 262 (297)
T 4eiv_A 211 VRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE---NGPRSI 262 (297)
T ss_dssp CC------------------CCEEEEECTTCCHHHHHHHHHHHHHH---HCGGGC
T ss_pred ccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH---hCcccc
Confidence 357999999 999999999999996555 565554
No 154
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.74 E-value=0.00015 Score=66.10 Aligned_cols=75 Identities=29% Similarity=0.217 Sum_probs=59.8
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.++.+.++|+|.|.+..-.+.. ...+.. ..+.++++.+ ++|+++.|||++++++.+++++|||.|.+|+..+.
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 466788899999999997421111 122344 7788888876 79999999999999999999999999999997664
No 155
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.72 E-value=0.00012 Score=68.08 Aligned_cols=70 Identities=17% Similarity=0.171 Sum_probs=57.0
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+..+.+.|...|.+...+ .+...+.+.++++.+.+++||++.|||++.+|+.+++.+|||.|.+|+.++.
T Consensus 192 a~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp HHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 344567788888887432 2456688899988874369999999999999999999999999999998874
No 156
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.71 E-value=0.001 Score=59.24 Aligned_cols=81 Identities=20% Similarity=0.241 Sum_probs=58.0
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEEchhHHHhhh
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVGRPVPFSLA 320 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~-~~dv~kal~lGAd~V~iGr~~l~~~~ 320 (371)
++.+.+.|+++++++.+ ..+.+.++++..+ .-+++++|||+. +.++.+++++|||.+.+||+++.+
T Consensus 125 ~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~-~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a-- 191 (208)
T 2czd_A 125 IEVANEIEPFGVIAPGT----------RPERIGYIRDRLK-EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA-- 191 (208)
T ss_dssp HHHHHHHCCSEEECCCS----------STHHHHHHHHHSC-TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS--
T ss_pred HHHHHHhCCcEEEECCC----------ChHHHHHHHHhCC-CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC--
Confidence 56778999999987643 2344566666663 335779999996 558999999999999999998853
Q ss_pred cCChHHHHHHHHHHHHHHH
Q 017434 321 VDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 321 ~~G~~gv~~~l~~l~~el~ 339 (371)
.. ..+.++.++++++
T Consensus 192 -~d---p~~~~~~l~~~i~ 206 (208)
T 2czd_A 192 -PN---PREAAKAIYDEIR 206 (208)
T ss_dssp -SS---HHHHHHHHHHHHC
T ss_pred -CC---HHHHHHHHHHHHh
Confidence 12 3455666666553
No 157
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.68 E-value=0.00017 Score=65.76 Aligned_cols=75 Identities=27% Similarity=0.230 Sum_probs=59.2
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.++.+.++|+|.|.+..-.+.. ...+.. +.+.++++.. ++|+++.|||++++++.+++.+|||.|.+|+..+.
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhh
Confidence 356788889999999997521111 122345 7788888876 79999999999999999999999999999997653
No 158
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.67 E-value=3.8e-05 Score=70.11 Aligned_cols=75 Identities=20% Similarity=0.110 Sum_probs=58.5
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.++.+.++|+|.|.++...... ......++.+.+++ .+ ++||++.|||++.+++.+++++|||+|++|+..+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 356788899999999997521100 01234577777777 55 69999999999999999999999999999998764
No 159
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.66 E-value=8.5e-05 Score=66.55 Aligned_cols=81 Identities=16% Similarity=0.058 Sum_probs=60.0
Q ss_pred EccCHHHHHHHHHhCCCEEEEeCCCCc-CC--CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEE
Q 017434 235 GVLTAEDASLAIQYGAAGIIVSNHGAR-QL--DYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFV 311 (371)
Q Consensus 235 ~v~~~e~a~~a~~~Gad~I~vs~~gg~-~~--~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~i 311 (371)
.+.+++++..+. .|+|+|.++.--.+ .. .+.+..++.+.++.+.+..++||++.|||. ++++.+++.+||++|.+
T Consensus 94 s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav 171 (210)
T 3ceu_A 94 SCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVV 171 (210)
T ss_dssp EECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEE
T ss_pred ecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEE
Confidence 357889999888 99999998642111 11 112335677777776521279999999998 89999999999999999
Q ss_pred chhHHH
Q 017434 312 GRPVPF 317 (371)
Q Consensus 312 Gr~~l~ 317 (371)
++.+..
T Consensus 172 ~s~i~~ 177 (210)
T 3ceu_A 172 LGDLWN 177 (210)
T ss_dssp SHHHHT
T ss_pred hHHhHc
Confidence 999864
No 160
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.65 E-value=0.00041 Score=65.16 Aligned_cols=87 Identities=28% Similarity=0.308 Sum_probs=68.5
Q ss_pred HHHHHHHhhcC--CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017434 218 KDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 295 (371)
Q Consensus 218 ~~i~~ir~~~~--~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~ 295 (371)
+.++.+|+..+ .++.+ .+.+.++++.+.++|+|+|.+.|- ..+.++++.+.+++++|+.++|||. .
T Consensus 184 ~av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGIt-~ 251 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNMT-L 251 (286)
T ss_dssp HHHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSCC-H
T ss_pred HHHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-H
Confidence 45778887763 45555 567899999999999999999773 2244556666665579999999996 8
Q ss_pred HHHHHHHHcCCCEEEEchhHH
Q 017434 296 TDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 296 ~dv~kal~lGAd~V~iGr~~l 316 (371)
+++.+..+.|+|.+.+|+...
T Consensus 252 eni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 252 ERAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp HHHHHHHHHTCSEEECTHHHH
T ss_pred HHHHHHHHcCCCEEEEcHHHc
Confidence 999999999999999988554
No 161
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.63 E-value=9.9e-05 Score=68.20 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=59.2
Q ss_pred CHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 238 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 238 ~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
..+.++.+.++|+|.|.++.-.+... .....++.+.++++.+ ++||++.|||++.+|+.+++.+|||+|.+|+.++
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 34668888999999999965321111 1224577788887665 7999999999999999999999999999999776
No 162
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.63 E-value=0.00016 Score=71.02 Aligned_cols=98 Identities=22% Similarity=0.292 Sum_probs=69.3
Q ss_pred ccCCCHHHHHHHHhhcCCCEEEEEcc--CHHHHHHHHHhCCCEEEEeCCCCcCCCCccc-hHHHHHHHHHHhcCCCcEEE
Q 017434 212 DRSLNWKDVKWLQTITSLPILVKGVL--TAEDASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 212 ~~~~~~~~i~~ir~~~~~pv~vK~v~--~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~via 288 (371)
++.+..+.++++++. +.|++++... ..+.++.+.++|+|.+.++.....+...++. .+..+.++++.. ++||++
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ 216 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA 216 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE
Confidence 334445567777775 8899888753 2455777789999999886432111112221 555677888876 799999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 289 DGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
||+.+++|+.+++.+|||+|.+|+
T Consensus 217 -ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 217 -GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp -ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred -CCcCCHHHHHHHHHcCCCEEEECC
Confidence 999999999999999999999986
No 163
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.62 E-value=0.00012 Score=69.27 Aligned_cols=86 Identities=19% Similarity=0.162 Sum_probs=66.3
Q ss_pred HHHHHHHhhcC--CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc---CCCcEEEecCC
Q 017434 218 KDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFLDGGV 292 (371)
Q Consensus 218 ~~i~~ir~~~~--~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~via~GGI 292 (371)
+.++.+|+..+ .++.+ .+.+.++++.+.++|+|+|.+++.+ .+.+.++++.+. .+++|.++|||
T Consensus 185 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNFK----------PEELHPTATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhhccCCCeeEEEECCC
Confidence 45777877764 45554 5678899999999999999998731 244444444432 25999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchhH
Q 017434 293 RRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
+.+++.+..++|||.+.+|+.+
T Consensus 254 -t~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 254 -TLDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp -CTTTHHHHCCTTCCEEECTHHH
T ss_pred -CHHHHHHHHHCCCCEEEEChhh
Confidence 8999999999999999999954
No 164
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.57 E-value=0.0052 Score=57.85 Aligned_cols=187 Identities=10% Similarity=0.014 Sum_probs=114.6
Q ss_pred eeecccccccccCChHhHHHHHHHHHcCCcEEecCC-----C--------CCCHHHH-------hccCCCceEEEE---e
Q 017434 77 IMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSW-----A--------TSSVEEV-------SSTGPGIRFFQL---Y 133 (371)
Q Consensus 77 i~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~-----~--------~~~~eei-------~~~~~~~~~~QL---y 133 (371)
.+..|.++ |...|+.+.++|+..++.+. + ..+++|+ .+..+.|....+ |
T Consensus 18 ~i~~~~a~--------D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gy 89 (295)
T 1xg4_A 18 PLQIVGTI--------NANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGF 89 (295)
T ss_dssp SEEEEECS--------SHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCS
T ss_pred cEEEecCc--------CHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCccc
Confidence 45566554 55899999999988765321 1 1245554 333446777777 5
Q ss_pred ecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 134 VTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 134 ~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
. .+++...+.+++..++|+.++.|.=.+ .|++..- +.+ . .. .+.
T Consensus 90 g-~~~~~~~~~v~~l~~aGa~gv~iEd~~---------------~~k~cgH--~~g-----------k---~L----~p~ 133 (295)
T 1xg4_A 90 G-SSAFNVARTVKSMIKAGAAGLHIEDQV---------------GAKRSGH--RPN-----------K---AI----VSK 133 (295)
T ss_dssp S-SSHHHHHHHHHHHHHHTCSEEEEECBC---------------SSCCCTT--SSS-----------C---CB----CCH
T ss_pred C-CCHHHHHHHHHHHHHcCCeEEEECCCC---------------CCcccCC--CCC-----------C---cc----CCH
Confidence 2 367777888888889999998775221 1221110 000 0 00 000
Q ss_pred CCCHHHHHHHHhhc-CCCEEEEEccC----------HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC
Q 017434 214 SLNWKDVKWLQTIT-SLPILVKGVLT----------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 282 (371)
Q Consensus 214 ~~~~~~i~~ir~~~-~~pv~vK~v~~----------~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~ 282 (371)
....+.|+.+++.. +.++.+..... .+.++.+.++|||.|.+- ++++.+.+.++.+.+
T Consensus 134 ~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~-- 202 (295)
T 1xg4_A 134 EEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPE---------AITELAMYRQFADAV-- 202 (295)
T ss_dssp HHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEET---------TCCSHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEe---------CCCCHHHHHHHHHHc--
Confidence 11123455555554 45666666422 245788899999999982 245678889999988
Q ss_pred CCcEEEecCC--CCH-HHHHHHHHcCCCEEEEchhHHHh
Q 017434 283 RVPVFLDGGV--RRG-TDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 283 ~i~via~GGI--~~~-~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
++|++++.-. .++ -...+.-++|.+.|.+|...+.+
T Consensus 203 ~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 203 QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHHH
T ss_pred CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHHH
Confidence 6899875532 222 23444446899999999987765
No 165
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.54 E-value=0.00057 Score=62.03 Aligned_cols=79 Identities=11% Similarity=0.107 Sum_probs=58.3
Q ss_pred HHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCC
Q 017434 244 LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLAVDG 323 (371)
Q Consensus 244 ~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G 323 (371)
.+.-.|...|.+.. .|. ....+.+.++++.+. ++||++-|||++++++.+++ .|||+|.+|+++.. .
T Consensus 148 ~a~~~g~~~VYld~-sG~-----~~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~-----~ 214 (228)
T 3vzx_A 148 VSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE-----D 214 (228)
T ss_dssp HHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH-----C
T ss_pred HHHHcCCCEEEecC-CCC-----cCCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc-----C
Confidence 34445788888876 332 125788888888762 58999999999999999987 79999999999885 3
Q ss_pred hHHHHHHHHHHH
Q 017434 324 EAGVRKVLQMLR 335 (371)
Q Consensus 324 ~~gv~~~l~~l~ 335 (371)
++-+.++++.++
T Consensus 215 p~~~~~~v~a~~ 226 (228)
T 3vzx_A 215 FDRALKTVAAVK 226 (228)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 444444444443
No 166
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=97.51 E-value=0.0087 Score=54.24 Aligned_cols=118 Identities=19% Similarity=0.168 Sum_probs=81.0
Q ss_pred CHHHHHHHHhhc--CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh---cCCCcEEEec
Q 017434 216 NWKDVKWLQTIT--SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA---KGRVPVFLDG 290 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~via~G 290 (371)
+|+=++.++... ++++-+=.+.+.+.|..+.++|+++|..+ -||-.+.+.+....+.++...+ +.+..|++.
T Consensus 99 T~eGl~Ai~~L~~eGI~vNvTliFS~~QA~laa~AGa~~iSpF--VgRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~A- 175 (230)
T 1vpx_A 99 TPDGIKAVKTLSAEGIKTNVTLVFSPAQAILAAKAGATYVSPF--VGRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAA- 175 (230)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHhCCCeEEEec--cchhhhccccHHHHHHHHHHHHHHcCCCeEEEee-
Confidence 444444444332 89998888999999999999999988764 2343334444555555555443 225566665
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCC--hHHHHHHHHHHHH
Q 017434 291 GVRRGTDVFKALALGASGVFVGRPVPFSLAVDG--EAGVRKVLQMLRD 336 (371)
Q Consensus 291 GI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G--~~gv~~~l~~l~~ 336 (371)
++|++.++.++...|+|.+-+.-.++..+...+ .+|++.+.+.+.+
T Consensus 176 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~gv~~F~~d~~~ 223 (230)
T 1vpx_A 176 SIRHPMHVVEAALMGVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKK 223 (230)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCCEEECCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 599999999998999999988888887765443 3566555555443
No 167
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.50 E-value=0.00031 Score=67.54 Aligned_cols=130 Identities=12% Similarity=0.089 Sum_probs=87.2
Q ss_pred CCcEEecCCCCCCHHHHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccc
Q 017434 104 GTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLT 183 (371)
Q Consensus 104 G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~ 183 (371)
..|++++.|+..+.++++.......|+|+|...+++.+.++++++++.|+. +++|. |.
T Consensus 46 ~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~---v~v~~---g~---------------- 103 (336)
T 1ypf_A 46 KLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLI---ASISV---GV---------------- 103 (336)
T ss_dssp SSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCC---CEEEE---CC----------------
T ss_pred cCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCe---EEEeC---CC----------------
Confidence 357888999888888886543345689999988888888888888776541 11110 00
Q ss_pred cccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhC--CCEEEEeCCCCc
Q 017434 184 LKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYG--AAGIIVSNHGAR 261 (371)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~G--ad~I~vs~~gg~ 261 (371)
..+.+ +.++.+.++| ++.|.+....|
T Consensus 104 --------------------------------~~~~~-------------------~~a~~~~~~g~~~~~i~i~~~~G- 131 (336)
T 1ypf_A 104 --------------------------------KEDEY-------------------EFVQQLAAEHLTPEYITIDIAHG- 131 (336)
T ss_dssp --------------------------------SHHHH-------------------HHHHHHHHTTCCCSEEEEECSSC-
T ss_pred --------------------------------CHHHH-------------------HHHHHHHhcCCCCCEEEEECCCC-
Confidence 00111 2255667778 88887743111
Q ss_pred CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 262 QLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 262 ~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.....++.+..+++..+ .+++..|+|.+.+++.++.++|||+|.++
T Consensus 132 ---~~~~~~~~i~~lr~~~~--~~~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 132 ---HSNAVINMIQHIKKHLP--ESFVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp ---CSHHHHHHHHHHHHHCT--TSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ---CcHHHHHHHHHHHHhCC--CCEEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 12346778888888763 34455577999999999999999999994
No 168
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.50 E-value=0.0036 Score=56.00 Aligned_cols=111 Identities=10% Similarity=0.037 Sum_probs=68.1
Q ss_pred HHHHHhhcCCCEEEEEc--cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 220 VKWLQTITSLPILVKGV--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v--~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
++.+++ .+.++.++.. .+...++.+.+.|.+.+++.-. ......|.. ..+.+..+++..+.++||+++|||+ .+
T Consensus 99 ~~~~~~-~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a-~~~~~~G~~g~~~~i~~lr~~~~~~~~i~v~GGI~-~~ 175 (216)
T 1q6o_A 99 LDVAKE-FNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRS-RDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLA-LE 175 (216)
T ss_dssp HHHHHH-TTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECC-HHHHHTTCCCCHHHHHHHHHHHHTTCEEEEESSCC-GG
T ss_pred HHHHHH-cCCCceeeeeeCCChhhHHHHHhcCcHHHHHHHH-HHHHhcCCCCCHHHHHHHHHhcCCCCcEEEECCcC-hh
Confidence 444444 4666554443 2345666666778877777321 000000000 3455666666664468899999998 78
Q ss_pred HHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 297 DVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 297 dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
.+.+++.+|||.+.+||++..+ .. ..+.++.++++++
T Consensus 176 ~~~~~~~aGad~ivvG~~I~~a---~d---p~~~~~~~~~~i~ 212 (216)
T 1q6o_A 176 DLPLFKGIPIHVFIAGRSIRDA---AS---PVEAARQFKRSIA 212 (216)
T ss_dssp GGGGGTTSCCSEEEESHHHHTS---SC---HHHHHHHHHHHHH
T ss_pred hHHHHHHcCCCEEEEeehhcCC---CC---HHHHHHHHHHHHH
Confidence 8999999999999999998742 12 2344555555554
No 169
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.47 E-value=0.00076 Score=63.94 Aligned_cols=95 Identities=27% Similarity=0.192 Sum_probs=63.3
Q ss_pred HHHHHHHhhcCCCEEEEEcc---------CH----H-HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh-c-
Q 017434 218 KDVKWLQTITSLPILVKGVL---------TA----E-DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA-K- 281 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v~---------~~----e-~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~-~- 281 (371)
..+...++.+++|+++=... ++ . -++.+.+.|+|.|.+.-. .+ +..+++.+.++.+.. .
T Consensus 145 ~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~----~~-~~g~~~~~~~vv~~~~~~ 219 (304)
T 1to3_A 145 KEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMP----LY-GKGARSDLLTASQRLNGH 219 (304)
T ss_dssp HHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCG----GG-GCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCC----cC-CCCCHHHHHHHHHhcccc
Confidence 33444445578998876531 11 2 277888999999998431 00 111455666665551 1
Q ss_pred CCCc-EEEecCCCCHH----HHHHHHHcCCCEEEEchhHHHh
Q 017434 282 GRVP-VFLDGGVRRGT----DVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 282 ~~i~-via~GGI~~~~----dv~kal~lGAd~V~iGr~~l~~ 318 (371)
..+| |++.||+ +.+ .+..++..||++|.+||.+...
T Consensus 220 ~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 220 INMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp CCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 1689 9999999 553 4777888999999999988754
No 170
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.46 E-value=0.00013 Score=69.01 Aligned_cols=86 Identities=21% Similarity=0.179 Sum_probs=54.0
Q ss_pred HHHHHHHhhcC--CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCC------CcEEEe
Q 017434 218 KDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGR------VPVFLD 289 (371)
Q Consensus 218 ~~i~~ir~~~~--~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~------i~via~ 289 (371)
+.++.+++..+ .++.+ .+.+.++++.+.++|+|+|.++|.+ .+.+.++++.+.+. ++|.++
T Consensus 187 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~~v~I~AS 255 (294)
T 3c2e_A 187 NAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKKHFLLECS 255 (294)
T ss_dssp HHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEEE
T ss_pred HHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCCCeEEEEE
Confidence 45777877764 45554 5677899999999999999997632 23344444444323 999999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 290 GGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 290 GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
||| +.+++.+..+.|+|.+.+|+..
T Consensus 256 GGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 256 GGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp CCC-CC------CCCSCSEEECGGGT
T ss_pred CCC-CHHHHHHHHHcCCCEEEEechh
Confidence 999 8999999999999999999974
No 171
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.45 E-value=0.0066 Score=54.22 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=64.0
Q ss_pred HHHHHHHhhcCCCEEE--E-E-----c---cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 218 KDVKWLQTITSLPILV--K-G-----V---LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~v--K-~-----v---~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
+.++.+++.+++|++- | . . .+.+.++.+.++|+|.|.++..-... -.....+.+..+++.++ ..++
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~--p~~~~~~~i~~~~~~~~-~~~v 122 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQR--PKETLDELVSYIRTHAP-NVEI 122 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCC--SSSCHHHHHHHHHHHCT-TSEE
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccC--cccCHHHHHHHHHHhCC-CceE
Confidence 4577888888888841 1 0 0 34577889999999999986421100 00123566777777763 4666
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
+. ++.+.+++.++...|+|.++++.+.
T Consensus 123 ~~--~~~t~~e~~~~~~~G~d~i~~~~~g 149 (223)
T 1y0e_A 123 MA--DIATVEEAKNAARLGFDYIGTTLHG 149 (223)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEEECTTTT
T ss_pred Ee--cCCCHHHHHHHHHcCCCEEEeCCCc
Confidence 65 6789999999999999999887654
No 172
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.42 E-value=0.00072 Score=63.31 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=68.9
Q ss_pred HHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 218 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 218 ~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
+-++.+|+.. ..|+.| .+-+.++++.++++|+|.|.+.|. +.+.+.++.+.+++++++.++|||. .+
T Consensus 187 ~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaSGGIt-~~ 254 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVSGNID-RN 254 (287)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEESSCC-TT
T ss_pred HHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEECCCC-HH
Confidence 3466666654 467665 678899999999999999999873 2356677777666689999999995 88
Q ss_pred HHHHHHHcCCCEEEEchhHH
Q 017434 297 DVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 297 dv~kal~lGAd~V~iGr~~l 316 (371)
.+.++.+.|+|.+.+|....
T Consensus 255 ~i~~~a~tGVD~IsvGalt~ 274 (287)
T 3tqv_A 255 SIVAIAKTGVDFISVGAITK 274 (287)
T ss_dssp THHHHHTTTCSEEECSHHHH
T ss_pred HHHHHHHcCCCEEEEChhhc
Confidence 89888889999999998553
No 173
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.41 E-value=0.00055 Score=60.89 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=55.6
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+.++.+...|+..+.+.+-+......+.. ++.+.++.... ++|||+.||+.+++|+.+++..||++|++|++++.
T Consensus 134 ~~i~~~~~~~~~~vli~~~~~~g~~~g~~-~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 134 DWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTCCSCCC-HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHhhcCCCeEEEEecCCCCcccccc-HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 45677788888867664321111112222 66777776654 79999999999999999999999999999999875
No 174
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.34 E-value=0.0013 Score=62.47 Aligned_cols=86 Identities=20% Similarity=0.257 Sum_probs=68.6
Q ss_pred HHHHHHHhhcC-CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 218 KDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 218 ~~i~~ir~~~~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
+-++.+|+..+ .|+.| .+-+.++++.++++|+|.|.+.|. +.+.+.++++.+.+++++.++|||. .+
T Consensus 220 ~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaSGGIt-~~ 287 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENSGNIT-LD 287 (320)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-HH
T ss_pred HHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCCC-HH
Confidence 44677777663 45554 567899999999999999999873 3456777777676689999999996 88
Q ss_pred HHHHHHHcCCCEEEEchhH
Q 017434 297 DVFKALALGASGVFVGRPV 315 (371)
Q Consensus 297 dv~kal~lGAd~V~iGr~~ 315 (371)
.+.++.+.|+|.+.+|...
T Consensus 288 ~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 288 NLKECAETGVDYISVGALT 306 (320)
T ss_dssp HHHHHHTTTCSEEECTHHH
T ss_pred HHHHHHHcCCCEEEECcee
Confidence 8888888999999999843
No 175
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.34 E-value=0.0024 Score=59.53 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=64.1
Q ss_pred HHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017434 217 WKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 295 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~ 295 (371)
.++++.+|+.+++||+.|. +.++..+..+.++|||+|.+.... ..+..+..+.+....+ .+.+++ .+.+.
T Consensus 102 ~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~-----l~~~~l~~l~~~a~~l--Gl~~lv--ev~t~ 172 (272)
T 3qja_A 102 LDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAA-----LEQSVLVSMLDRTESL--GMTALV--EVHTE 172 (272)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGG-----SCHHHHHHHHHHHHHT--TCEEEE--EESSH
T ss_pred HHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEeccc-----CCHHHHHHHHHHHHHC--CCcEEE--EcCCH
Confidence 4678999999999999996 467777899999999999984210 1122333333333333 466665 47899
Q ss_pred HHHHHHHHcCCCEEEEch
Q 017434 296 TDVFKALALGASGVFVGR 313 (371)
Q Consensus 296 ~dv~kal~lGAd~V~iGr 313 (371)
+++.+++.+|+|.++++.
T Consensus 173 ee~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 173 QEADRALKAGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHHHTCSEEEEES
T ss_pred HHHHHHHHCCCCEEEECC
Confidence 999999999999999984
No 176
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.30 E-value=0.0053 Score=55.67 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=59.8
Q ss_pred HHHHHHHHhhcCCCEEE--E-E------c--cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchH-HHHHHHHHHhcCCC
Q 017434 217 WKDVKWLQTITSLPILV--K-G------V--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATV-MALEEVVQAAKGRV 284 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~v--K-~------v--~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i 284 (371)
.++|+++|+.+++|++- | . . .+.++++.+.++|+|.|.+...... .|..+ +.+..+++ . .+
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~--g~ 130 (229)
T 3q58_A 58 IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-H--GL 130 (229)
T ss_dssp HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TC
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-C--CC
Confidence 46789999999999872 3 1 1 2457899999999999987543210 12222 33444433 2 46
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEE
Q 017434 285 PVFLDGGVRRGTDVFKALALGASGVFV 311 (371)
Q Consensus 285 ~via~GGI~~~~dv~kal~lGAd~V~i 311 (371)
++++ ++.+.+++.++..+|||.|.+
T Consensus 131 ~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 131 LAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp EEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred EEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 6665 689999999999999999975
No 177
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.28 E-value=0.0019 Score=65.49 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=53.0
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.+.++.+.++|+|.|.+....|. ....++.+..+++.++ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~----~~~~~~~i~~i~~~~~-~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGN----SVYQIAMVHYIKQKYP-HLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCC----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccCCc----chhHHHHHHHHHHhCC-CCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 46788899999999999543221 0224577888888773 688876 77999999999999999999884
No 178
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.27 E-value=0.0059 Score=55.44 Aligned_cols=86 Identities=21% Similarity=0.227 Sum_probs=59.6
Q ss_pred HHHHHHHHhhcCCCEEE--EE-------c--cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchH-HHHHHHHHHhcCCC
Q 017434 217 WKDVKWLQTITSLPILV--KG-------V--LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATV-MALEEVVQAAKGRV 284 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~v--K~-------v--~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i 284 (371)
.+.|+++|+.+++|++- |- . .+.++++.+.++|+|.|.+...... .|..+ +.+..+++ . .+
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~----~p~~l~~~i~~~~~-~--g~ 130 (232)
T 3igs_A 58 IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ----RPVAVEALLARIHH-H--HL 130 (232)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TC
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC----CHHHHHHHHHHHHH-C--CC
Confidence 46789999999999862 31 1 3457899999999999988543210 12222 33343332 2 45
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEE
Q 017434 285 PVFLDGGVRRGTDVFKALALGASGVFV 311 (371)
Q Consensus 285 ~via~GGI~~~~dv~kal~lGAd~V~i 311 (371)
++++ .+.+.+++.++..+|||.|.+
T Consensus 131 ~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 131 LTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp EEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred EEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 6665 689999999999999999975
No 179
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.25 E-value=0.0007 Score=61.20 Aligned_cols=97 Identities=14% Similarity=0.092 Sum_probs=64.7
Q ss_pred cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 237 LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 237 ~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
.+.+.++.+.+.|++.+++.-....+.++...+...+..+++..+.+.+|.++|||+ ++++.++..+|||.+.+||++.
T Consensus 122 ~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~-~~~~~~~~~aGad~~VvG~~I~ 200 (221)
T 3exr_A 122 WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGLS-VDTLKLFEGVDVFTFIAGRGIT 200 (221)
T ss_dssp CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSCC-GGGGGGGTTCCCSEEEECHHHH
T ss_pred CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCCC-HHHHHHHHHCCCCEEEECchhh
Confidence 356777788888999888842211122233334555666666554468899999995 7788888889999999999876
Q ss_pred HhhhcCChHHHHHHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLRDEFEL 340 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~~el~~ 340 (371)
.+ ..+ .+.++.++++++.
T Consensus 201 ~a---~dp---~~a~~~~~~~~~~ 218 (221)
T 3exr_A 201 EA---KNP---AGAARAFKDEIKR 218 (221)
T ss_dssp TS---SSH---HHHHHHHHHHHHH
T ss_pred CC---CCH---HHHHHHHHHHHHH
Confidence 42 122 2445666666654
No 180
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=97.25 E-value=0.011 Score=57.74 Aligned_cols=208 Identities=21% Similarity=0.236 Sum_probs=117.1
Q ss_pred CCCCCccceeecCcccC---cceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCCCCCHHHHhccCCCceEEEEe
Q 017434 58 DVSKIDMTTTVLGFNIS---MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWATSSVEEVSSTGPGIRFFQLY 133 (371)
Q Consensus 58 ~~~~~d~s~~i~G~~~~---~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~~~~~eei~~~~~~~~~~QLy 133 (371)
....-|+.+++.|..+. .+++++|.+.. +.+.=..++++++++|+.++. .++...+ .+.-||
T Consensus 123 ~~~~~~t~i~i~~~~iG~~~~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk~q~fkprt---------s~~~f~-- 188 (385)
T 3nvt_A 123 KNKKEDTIVTVKGLPIGNGEPVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIRGGAFKPRT---------SPYDFQ-- 188 (385)
T ss_dssp TTCCSCCCEEETTEEETSSSCEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCS---------STTSCC--
T ss_pred ccCCCCcEEEECCEEECCCCeEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEEcccccCCC---------ChHhhc--
Confidence 44455666677665543 46888998764 333345899999999998775 3332111 122233
Q ss_pred ecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 134 VTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 134 ~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
.-..+....+.+.+++.|...+. ++--|. .-+.-..+ ++ .+. .++ + .
T Consensus 189 -gl~~egl~~L~~~~~~~Gl~~~t-e~~d~~----~~~~l~~~-vd-~lk---------------Igs---------~-~ 235 (385)
T 3nvt_A 189 -GLGLEGLKILKRVSDEYGLGVIS-EIVTPA----DIEVALDY-VD-VIQ---------------IGA---------R-N 235 (385)
T ss_dssp -CCTHHHHHHHHHHHHHHTCEEEE-ECCSGG----GHHHHTTT-CS-EEE---------------ECG---------G-G
T ss_pred -CCCHHHHHHHHHHHHHcCCEEEE-ecCCHH----HHHHHHhh-CC-EEE---------------ECc---------c-c
Confidence 12346666677777788887653 221111 11110000 00 000 000 0 0
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCC---ccchHHHHHHHHHHhcCCC
Q 017434 214 SLNWKDVKWLQTITSLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDY---VPATVMALEEVVQAAKGRV 284 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~i 284 (371)
......++.+. .++.||++|.. .++++. +.+.+.|.+-|++--.|.+..+. ....+..++.+++.. .+
T Consensus 236 ~~n~~LL~~~a-~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~l 312 (385)
T 3nvt_A 236 MQNFELLKAAG-RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HL 312 (385)
T ss_dssp TTCHHHHHHHH-TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SS
T ss_pred ccCHHHHHHHH-ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CC
Confidence 11345566654 47999999964 467664 44556788777765444433222 122556677777766 68
Q ss_pred cEEEe----cCCCCH--HHHHHHHHcCCCEEEEchhH
Q 017434 285 PVFLD----GGVRRG--TDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 285 ~via~----GGI~~~--~dv~kal~lGAd~V~iGr~~ 315 (371)
||+.| +|-+.- .=...|+++||++++|=+-+
T Consensus 313 pV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~ 349 (385)
T 3nvt_A 313 PVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHP 349 (385)
T ss_dssp CEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecC
Confidence 99887 343333 23456889999999998744
No 181
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.23 E-value=0.0026 Score=57.30 Aligned_cols=97 Identities=22% Similarity=0.258 Sum_probs=60.0
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC--CcC---CCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG--ARQ---LDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g--g~~---~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
++..++. ++.+++= +.+.++.+++.+.|.+.|.+.+.- |+. ....+..++...+..+.+..++||++.|||++
T Consensus 104 ~~~a~~~-Gl~~iv~-v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~ 181 (219)
T 2h6r_A 104 INKCKNL-GLETIVC-TNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISK 181 (219)
T ss_dssp HHHHHHH-TCEEEEE-ESSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCS
T ss_pred HHHHHHC-CCeEEEE-eCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCc
Confidence 3444333 5544432 344556777888898888775532 111 01111112233233333334799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchhHHHh
Q 017434 295 GTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
++++..+...|||+|.+|++++..
T Consensus 182 ~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 182 GEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp HHHHHHHHTTTCCCEEESHHHHTC
T ss_pred HHHHHHHhhCCCCEEEEcHHHhCc
Confidence 999999999999999999999863
No 182
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.22 E-value=0.0023 Score=61.18 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=77.8
Q ss_pred HHHHHHHhhcCCCEEEEEcc---------CHH-----------HHHHH--HHhCCCEEEEeCCCCcC----------CCC
Q 017434 218 KDVKWLQTITSLPILVKGVL---------TAE-----------DASLA--IQYGAAGIIVSNHGARQ----------LDY 265 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v~---------~~e-----------~a~~a--~~~Gad~I~vs~~gg~~----------~~~ 265 (371)
+.+..-+..+++|+++=.+. +.+ -++.+ .+.|+|.+++--.|-.. .+.
T Consensus 150 ~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~ 229 (332)
T 3iv3_A 150 ERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYS 229 (332)
T ss_dssp HHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBC
T ss_pred HHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhccccccccccc
Confidence 33444455679999875431 111 14555 57799999995322110 011
Q ss_pred ccchHHHHHHHHHHhcCCCcEE-EecCCCCHHHHHHHH----HcCC--CEEEEchhHHHhhhcCChHHHHHHHHHHHHHH
Q 017434 266 VPATVMALEEVVQAAKGRVPVF-LDGGVRRGTDVFKAL----ALGA--SGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEF 338 (371)
Q Consensus 266 ~~~~~~~l~~i~~~~~~~i~vi-a~GGI~~~~dv~kal----~lGA--d~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el 338 (371)
.....+...++.+.. .+|++ .+||+ +.+++.+.+ ..|| .+|.+||.... .+|..+.+.=.+..
T Consensus 230 ~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq-------~~v~~~~~~~~~~~ 299 (332)
T 3iv3_A 230 KEEAAQAFREQEAST--DLPYIYLSAGV-SAELFQETLVFAHKAGAKFNGVLCGRATWA-------GSVQVYMEEGKEAA 299 (332)
T ss_dssp HHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHHHHHHHHHHHHTCCCCEEEECHHHHT-------THHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHHHHHHHHHHHcCCCcceEEeeHHHHH-------hhhhhhccccHHHH
Confidence 112223455555544 79965 79998 566666544 4799 99999998653 23433443334566
Q ss_pred HHHHHHhCCCCHhhhcccc
Q 017434 339 ELTMALSGCRSLKEITRNH 357 (371)
Q Consensus 339 ~~~m~~~G~~~l~~l~~~~ 357 (371)
+.||+..|..++++|+...
T Consensus 300 ~~~l~~~g~~~i~~l~~v~ 318 (332)
T 3iv3_A 300 RQWLRTSGLQNINELNKVL 318 (332)
T ss_dssp HHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHH
Confidence 7777777877777776543
No 183
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=97.20 E-value=0.012 Score=57.28 Aligned_cols=121 Identities=14% Similarity=0.105 Sum_probs=91.2
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.++||+++-+.+++ +..+
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 176 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-------------------------------------------------GEKL 176 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-------------------------------------------------CHHH
Confidence 577778888888899999999876532 0112
Q ss_pred CHHHHHHHHhhc-CCCEEEEEc--cCHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 216 NWKDVKWLQTIT-SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~v--~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
..+.++.+|+.+ +.|+.+..- .+.++ ++.+.+.|++.|.= ...+..++.+.++++.+ ++||++
T Consensus 177 ~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPI~~ 246 (384)
T 2pgw_A 177 DLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQ--------PTVSWSIPAMAHVREKV--GIPIVA 246 (384)
T ss_dssp HHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHhhC--CCCEEE
Confidence 457789999888 578877642 45555 35566789888751 11234678888888887 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
++.+.+..++.+++..| +|.|++....
T Consensus 247 de~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 247 DQAAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 99999999999999987 8999997644
No 184
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.19 E-value=0.0028 Score=57.53 Aligned_cols=113 Identities=10% Similarity=0.099 Sum_probs=75.0
Q ss_pred HHHH---HHHhhcCCCEEEEEc--cCHHHHHHHHHhC-CCEEEEeC-CCCc-CCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017434 218 KDVK---WLQTITSLPILVKGV--LTAEDASLAIQYG-AAGIIVSN-HGAR-QLDYVPATVMALEEVVQAAKGRVPVFLD 289 (371)
Q Consensus 218 ~~i~---~ir~~~~~pv~vK~v--~~~e~a~~a~~~G-ad~I~vs~-~gg~-~~~~~~~~~~~l~~i~~~~~~~i~via~ 289 (371)
+.++ .+|+. +..+.+-.- ...+.++...+.| +|.|.+-. +.|. .....+..++-+.++++..+ +++|.++
T Consensus 102 ~~i~~~~~i~~~-G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~Vd 179 (227)
T 1tqx_A 102 RCIQLAKEIRDN-NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQVD 179 (227)
T ss_dssp HHHHHHHHHHTT-TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEEE
T ss_pred HHHHHHHHHHHc-CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEEE
Confidence 4566 77664 544444332 2235567777776 99996643 2221 12235667788888887764 7899999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 290 GGVRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 290 GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
|||. .+.+.++.++|||.+.+||.++.+ .. ..+.++.|++.++
T Consensus 180 GGI~-~~ti~~~~~aGAd~~V~GsaIf~~---~d---~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 180 GGLN-IETTEISASHGANIIVAGTSIFNA---ED---PKYVIDTMRVSVQ 222 (227)
T ss_dssp SSCC-HHHHHHHHHHTCCEEEESHHHHTC---SS---HHHHHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHcCCCEEEEeHHHhCC---CC---HHHHHHHHHHHHH
Confidence 9998 789999999999999999987632 12 3345556655544
No 185
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.19 E-value=0.0012 Score=60.51 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=59.6
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+.|+...+.|+|.+++-.-.+. ..+.+...+.+.++.+.+ .+|+...||||+.+|+.++|.+|||-|.+|+..+
T Consensus 35 ~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 35 KKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp HHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred HHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 5678889999999988532110 123355678888888877 7999999999999999999999999999999654
No 186
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.18 E-value=0.0017 Score=61.04 Aligned_cols=86 Identities=13% Similarity=0.149 Sum_probs=68.2
Q ss_pred HHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 218 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 218 ~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
+-++.+|+.. ..|+.| .+-+.++++.++++|+|.|.+.|. +.+.+.++.+.+++++.+.++|||. .+
T Consensus 196 ~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~leaSGGIt-~~ 263 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEVSGCVN-IR 263 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-TT
T ss_pred HHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEEECCCC-HH
Confidence 4467777765 355554 467899999999999999999873 2356666666666789999999995 88
Q ss_pred HHHHHHHcCCCEEEEchhH
Q 017434 297 DVFKALALGASGVFVGRPV 315 (371)
Q Consensus 297 dv~kal~lGAd~V~iGr~~ 315 (371)
.+.++.+.|+|.+.+|...
T Consensus 264 ~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 264 NVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp THHHHHTTTCSEEECGGGT
T ss_pred HHHHHHHcCCCEEEeCccc
Confidence 8888888999999999754
No 187
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.17 E-value=0.00098 Score=60.76 Aligned_cols=73 Identities=18% Similarity=0.173 Sum_probs=57.7
Q ss_pred CHHHHHHHHHhCC-----CEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 238 TAEDASLAIQYGA-----AGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 238 ~~e~a~~a~~~Ga-----d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
+++.++...++|. ..|.+.. .|. ....+.+.++++... ++|+++-|||++++++.+++. |||+|.+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY-SGT-----YGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC-TTS-----CCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC-CCC-----cchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 5666777777776 6777655 232 446788888888752 689999999999999999999 99999999
Q ss_pred hhHHHh
Q 017434 313 RPVPFS 318 (371)
Q Consensus 313 r~~l~~ 318 (371)
++++..
T Consensus 219 Sa~v~~ 224 (234)
T 2f6u_A 219 NVIYEK 224 (234)
T ss_dssp HHHHHH
T ss_pred hHHHhC
Confidence 998753
No 188
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.17 E-value=0.00064 Score=63.76 Aligned_cols=87 Identities=22% Similarity=0.193 Sum_probs=66.9
Q ss_pred HHHHHHHhhcC--CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC---CCcEEEecCC
Q 017434 218 KDVKWLQTITS--LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG---RVPVFLDGGV 292 (371)
Q Consensus 218 ~~i~~ir~~~~--~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~via~GGI 292 (371)
+.++.+|+..+ .++.| .+.+.++++.+.++|+|.|.+.|- +.+.+.++++.+++ ++++.++|||
T Consensus 181 ~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v~ieASGGI 249 (285)
T 1o4u_A 181 RAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNVIVEVSGGI 249 (285)
T ss_dssp HHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred HHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCceEEEECCC
Confidence 45777887763 46665 567899999999999999999873 23444444444433 7999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
. .+.+.++.+.|+|.+.+|+...
T Consensus 250 t-~eni~~~a~tGVD~IsvGslt~ 272 (285)
T 1o4u_A 250 T-EENVSLYDFETVDVISSSRLTL 272 (285)
T ss_dssp C-TTTGGGGCCTTCCEEEEGGGTS
T ss_pred C-HHHHHHHHHcCCCEEEEeHHHc
Confidence 5 8899998889999999999554
No 189
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.11 E-value=0.0017 Score=60.88 Aligned_cols=87 Identities=18% Similarity=0.169 Sum_probs=65.2
Q ss_pred HHHHHHHhhcC-CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC---CCcEEEecCCC
Q 017434 218 KDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG---RVPVFLDGGVR 293 (371)
Q Consensus 218 ~~i~~ir~~~~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~via~GGI~ 293 (371)
+-++..|+..+ .|+.+ .+.+.++++.+.++|+|.|.+.|. +.+.+.++.+.+++ ++++.++|||.
T Consensus 183 ~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~----------~~~~~~~~v~~l~~~~~~v~ieaSGGIt 251 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNF----------AVWQTQTAVQRRDSRAPTVMLESSGGLS 251 (284)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESSCC
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeEEEEECCCC
Confidence 45777777653 25555 567899999999999999999873 12333344433332 79999999995
Q ss_pred CHHHHHHHHHcCCCEEEEchhHH
Q 017434 294 RGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~iGr~~l 316 (371)
.+++.++.+.|+|.+.+|+...
T Consensus 252 -~~~i~~~a~tGVD~isvG~l~~ 273 (284)
T 1qpo_A 252 -LQTAATYAETGVDYLAVGALTH 273 (284)
T ss_dssp -TTTHHHHHHTTCSEEECGGGTS
T ss_pred -HHHHHHHHhcCCCEEEECHHHc
Confidence 8999999999999999998543
No 190
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.11 E-value=0.0015 Score=61.42 Aligned_cols=86 Identities=20% Similarity=0.327 Sum_probs=66.1
Q ss_pred HHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 218 KDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 218 ~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
+-++.+|+.. ..|+.| .+-+.++++.++++|+|.|.+.|. +.+.+.++.+.+.+++++.++|||. .+
T Consensus 198 ~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaSGGI~-~~ 265 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVSGGVN-FD 265 (298)
T ss_dssp HHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEESSCS-TT
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-HH
Confidence 3467777765 244433 367889999999999999999873 2355666666555689999999995 78
Q ss_pred HHHHHHHcCCCEEEEchhH
Q 017434 297 DVFKALALGASGVFVGRPV 315 (371)
Q Consensus 297 dv~kal~lGAd~V~iGr~~ 315 (371)
.+.++.+.|+|.+.+|+..
T Consensus 266 ~i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 266 TVRAIAETGVDRISIGALT 284 (298)
T ss_dssp THHHHHHTTCSEEECGGGG
T ss_pred HHHHHHHcCCCEEEECCee
Confidence 8988888999999999844
No 191
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.08 E-value=0.0041 Score=63.49 Aligned_cols=81 Identities=16% Similarity=0.077 Sum_probs=60.8
Q ss_pred ccCHHHHHHHHHhC---CCEEEEeCCCCc-CCCC---ccchHHHHHHHHHHhc----CCCcEEEecCCCCHHHHHHHHH-
Q 017434 236 VLTAEDASLAIQYG---AAGIIVSNHGAR-QLDY---VPATVMALEEVVQAAK----GRVPVFLDGGVRRGTDVFKALA- 303 (371)
Q Consensus 236 v~~~e~a~~a~~~G---ad~I~vs~~gg~-~~~~---~~~~~~~l~~i~~~~~----~~i~via~GGI~~~~dv~kal~- 303 (371)
+.++++++.+.+.| +|+|.++.-..+ .... .+..++.+.++.+.+. .++|+++.||| +.+++.+.+.
T Consensus 115 ~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~ 193 (540)
T 3nl6_A 115 VGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQ 193 (540)
T ss_dssp ECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHh
Confidence 46899999999999 999999642221 1111 1234666777766541 27999999999 6899999998
Q ss_pred -------cCCCEEEEchhHHH
Q 017434 304 -------LGASGVFVGRPVPF 317 (371)
Q Consensus 304 -------lGAd~V~iGr~~l~ 317 (371)
.||++|.+++.++.
T Consensus 194 ~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 194 CVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp CBCTTSSCBCSCEEESHHHHT
T ss_pred hcccccccCceEEEEeHHHhc
Confidence 89999999998874
No 192
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.05 E-value=0.0013 Score=60.15 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=55.7
Q ss_pred CHHHHHHHHHhCC----CEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 238 TAEDASLAIQYGA----AGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 238 ~~e~a~~a~~~Ga----d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
+++.++...++|. -.|.+.. .|. ....+.+.++++... ++||++-|||++++++.+++. |||+|.+|+
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s-~G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHTCS-SSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred CHHHHHHHHHhCcccCCCEEEEeC-CCc-----cChHHHHHHHHHhcC-CCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 3567777776663 5666544 232 446778888887642 689999999999999999888 999999999
Q ss_pred hHHH
Q 017434 314 PVPF 317 (371)
Q Consensus 314 ~~l~ 317 (371)
+++.
T Consensus 212 a~v~ 215 (240)
T 1viz_A 212 AVYE 215 (240)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9875
No 193
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.02 E-value=0.0042 Score=60.20 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=67.8
Q ss_pred HHHHHHHHhhcCCCEEEEEcc-CHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017434 217 WKDVKWLQTITSLPILVKGVL-TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 295 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v~-~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~ 295 (371)
.+.++++++...+|+.+-... +.+.++.+.++|+|.|++....|. .....+.+.++++.+ ++||++ |++.+.
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g~v~t~ 156 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTE 156 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-EEECSH
T ss_pred HHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-ccCCCH
Confidence 356788888778898877643 367799999999999988532221 122346677777776 688887 678999
Q ss_pred HHHHHHHHcCCCEEEEc
Q 017434 296 TDVFKALALGASGVFVG 312 (371)
Q Consensus 296 ~dv~kal~lGAd~V~iG 312 (371)
+++.++..+|||+|.+|
T Consensus 157 e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 157 EATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCcCEEEEe
Confidence 99999999999999996
No 194
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=97.02 E-value=0.012 Score=57.00 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=90.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.+.+.++++.+.||+++-+.++++ ++...
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~~ 177 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP------------------------------------------------DLKED 177 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------------------------------------------------SHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC------------------------------------------------CHHHH
Confidence 677777888888899999998765431 01124
Q ss_pred HHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 217 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.+.++.+|+.+ +.++.++.- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ ++||++
T Consensus 178 ~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI~~ 247 (371)
T 2ovl_A 178 VDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIEE--------PTIPDDLVGNARIVRES--GHTIAG 247 (371)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHH--CSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEEe
Confidence 57789999887 588988853 455554 5566778887731 12234678888888887 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
++.+.+..|+.+++..| +|.|++....
T Consensus 248 dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 275 (371)
T 2ovl_A 248 GENLHTLYDFHNAVRAGSLTLPEPDVSN 275 (371)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEECCCTTT
T ss_pred CCCCCCHHHHHHHHHcCCCCEEeeCccc
Confidence 99999999999999987 8999987543
No 195
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=96.96 E-value=0.0082 Score=55.99 Aligned_cols=167 Identities=19% Similarity=0.218 Sum_probs=101.8
Q ss_pred hHHHHHHHHHcCCcEE-ecCC-----CCCCH---HHHhccCCCceEEE--------EeecCChHHHHHHHHHHHHcCCcE
Q 017434 93 ECATARAASAAGTIMT-LSSW-----ATSSV---EEVSSTGPGIRFFQ--------LYVTKHRNVDAQLVKRAERAGFKA 155 (371)
Q Consensus 93 e~~~a~aa~~~G~~~~-~s~~-----~~~~~---eei~~~~~~~~~~Q--------Ly~~~d~~~~~~~~~~a~~aG~~a 155 (371)
++.-+.+|.+.|+.-+ +.+. -+.+. +.+.+...-|..+- +|...+.+.+.+-++.++++|++.
T Consensus 48 s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdG 127 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADG 127 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Confidence 4567778888886533 3221 12233 33333222122111 233334456778888899999999
Q ss_pred EEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEE
Q 017434 156 IALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVK 234 (371)
Q Consensus 156 l~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK 234 (371)
+++.+-+| |...+.+.++++.+.. ++++++=
T Consensus 128 vVfG~L~~------------------------------------------------dg~iD~~~~~~Li~~a~~l~vTFH 159 (287)
T 3iwp_A 128 LVFGALTE------------------------------------------------DGHIDKELCMSLMAICRPLPVTFH 159 (287)
T ss_dssp EEECCBCT------------------------------------------------TSCBCHHHHHHHHHHHTTSCEEEC
T ss_pred EEEeeeCC------------------------------------------------CCCcCHHHHHHHHHHcCCCcEEEE
Confidence 98743111 1123444444444443 4566654
Q ss_pred Ec----cCHH-HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-cCCCE
Q 017434 235 GV----LTAE-DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA-LGASG 308 (371)
Q Consensus 235 ~v----~~~e-~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~-lGAd~ 308 (371)
-. .++. ..+.+.++|+|.|-.|+. .......++.|+++.+...++++|++.|||+ .+++.+.++ +|++.
T Consensus 160 RAFD~~~d~~~Ale~Li~lGvdrILTSG~----~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l~~~tG~~~ 234 (287)
T 3iwp_A 160 RAFDMVHDPMAALETLLTLGFERVLTSGC----DSSALEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRILEGSGATE 234 (287)
T ss_dssp GGGGGCSCHHHHHHHHHHHTCSEEEECTT----SSSTTTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHHHHHHHHCCSE
T ss_pred CchhccCCHHHHHHHHHHcCCCEEECCCC----CCChHHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHHHHHHhhCCCE
Confidence 32 2343 357788899999988653 2233556777888877776689999999997 688888877 89998
Q ss_pred EEEc
Q 017434 309 VFVG 312 (371)
Q Consensus 309 V~iG 312 (371)
+=..
T Consensus 235 ~H~S 238 (287)
T 3iwp_A 235 FHCS 238 (287)
T ss_dssp EEEC
T ss_pred EeEC
Confidence 8765
No 196
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.94 E-value=0.0042 Score=56.69 Aligned_cols=79 Identities=8% Similarity=-0.148 Sum_probs=53.1
Q ss_pred CHHHHHHHHHhCCCEEEE-eCCCCc-CCCCccchHHHHHHHHHHhcC---CCcEEEecCCCCHHHHHHHHH--cCCCEEE
Q 017434 238 TAEDASLAIQYGAAGIIV-SNHGAR-QLDYVPATVMALEEVVQAAKG---RVPVFLDGGVRRGTDVFKALA--LGASGVF 310 (371)
Q Consensus 238 ~~e~a~~a~~~Gad~I~v-s~~gg~-~~~~~~~~~~~l~~i~~~~~~---~i~via~GGI~~~~dv~kal~--lGAd~V~ 310 (371)
|+.+.......++|.|.+ +-+.|. .....+..++-+.++++.... +++|.++|||. .+++.++.+ +|||.+.
T Consensus 137 Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~V 215 (237)
T 3cu2_A 137 TPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLV 215 (237)
T ss_dssp SCGGGGTTTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEE
T ss_pred ChHHHHHHHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEE
Confidence 333333333358998866 222221 111234456667777776532 58999999998 899999999 9999999
Q ss_pred EchhHHH
Q 017434 311 VGRPVPF 317 (371)
Q Consensus 311 iGr~~l~ 317 (371)
+||+++.
T Consensus 216 vGSaIf~ 222 (237)
T 3cu2_A 216 SGSALFS 222 (237)
T ss_dssp ECGGGGS
T ss_pred EeeHHhC
Confidence 9998763
No 197
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.92 E-value=0.0018 Score=58.21 Aligned_cols=87 Identities=20% Similarity=0.156 Sum_probs=61.1
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEEchhHHHh
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~-~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
+-++.+.++|+|+++++.+ ..+.+..+++.++ + .++.++||+. +.+..+++..|||.+.+|||++.+
T Consensus 119 ~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a 186 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQS 186 (215)
T ss_dssp HHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCC
Confidence 4567788999999988542 2345667777764 4 6889999984 236778889999999999999864
Q ss_pred hhcCChHHHHHHHHHHHHHHHHHHHH
Q 017434 319 LAVDGEAGVRKVLQMLRDEFELTMAL 344 (371)
Q Consensus 319 ~~~~G~~gv~~~l~~l~~el~~~m~~ 344 (371)
..+ ...++.++++++.....
T Consensus 187 ---~dp---~~a~~~i~~~i~~~~~~ 206 (215)
T 3ve9_A 187 ---ADP---VRKLEEIVRSQEEVLSS 206 (215)
T ss_dssp ---SSH---HHHHHHHHHHHHHHC--
T ss_pred ---CCH---HHHHHHHHHHHHHHHHH
Confidence 122 34566777777665443
No 198
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=96.92 E-value=0.048 Score=49.04 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=78.5
Q ss_pred CHHHHHHHHhhc--CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh---cCCCcEEEec
Q 017434 216 NWKDVKWLQTIT--SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA---KGRVPVFLDG 290 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~via~G 290 (371)
+|+=++.++... ++++-+=.+.+.+.|..+.++|+++|... -||-.+.+.+....+.++...+ +.+..|++.
T Consensus 89 T~eGl~A~~~L~~~GI~vn~TliFS~~QA~~aa~AGa~~iSpf--vgRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A- 165 (220)
T 1l6w_A 89 TAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPY--VNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA- 165 (220)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEECSHHHHHHHHHHTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEec--cchhhcccccHHHHHHHHHHHHHhcCCCeEEeec-
Confidence 444444443332 89999888999999999999999988764 2333334444555665555543 225556665
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchhHHHhhhcCC--hHHHHHHHHH
Q 017434 291 GVRRGTDVFKALALGASGVFVGRPVPFSLAVDG--EAGVRKVLQM 333 (371)
Q Consensus 291 GI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G--~~gv~~~l~~ 333 (371)
++|++.++.++..+|+|.+-+.-.++..+..++ ..+++.+.+.
T Consensus 166 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~~v~~F~~D 210 (220)
T 1l6w_A 166 SFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQD 210 (220)
T ss_dssp CCSSHHHHHHHHHTTCSEEEECHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCCeEECCHHHHHHHHcCCChHHHHHHHHHH
Confidence 699999999999999999999888887765443 2344444333
No 199
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=96.91 E-value=0.006 Score=58.76 Aligned_cols=121 Identities=17% Similarity=0.180 Sum_probs=90.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.++++ ++..
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 174 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYP------------------------------------------------ALDQ 174 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCS------------------------------------------------SHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC------------------------------------------------CHHH
Confidence 4667777778888889999998865431 1112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.|+.++.- .+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPI~ 244 (359)
T 1mdl_A 175 DLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEE--------PTLQHDYEGHQRIQSKL--NVPVQ 244 (359)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEEC--------CSCTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEC--------CCChhhHHHHHHHHHhC--CCCEE
Confidence 457789999887 588888853 45555 45577889987741 12234678888888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
+++.+.+..++.+++..| +|.|++...
T Consensus 245 ~de~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (359)
T 1mdl_A 245 MGENWLGPEEMFKALSIGACRLAMPDAM 272 (359)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEeecch
Confidence 999999999999999987 899998754
No 200
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.84 E-value=0.0035 Score=56.96 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=60.3
Q ss_pred CHHHHHHHHhhcCCCE-EEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 216 NWKDVKWLQTITSLPI-LVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv-~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
..+.|+++++.++..+ ....+.+.++++.+.++|+|+|+.-+ .+.+.+..+++. .+|++. |+.|
T Consensus 72 a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~----------~~~~vi~~~~~~---gi~~ip--Gv~T 136 (232)
T 4e38_A 72 AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG----------FNPNTVRACQEI---GIDIVP--GVNN 136 (232)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHHH---TCEEEC--EECS
T ss_pred HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC----------CCHHHHHHHHHc---CCCEEc--CCCC
Confidence 3577899998874433 33346889999999999999996421 123444444432 688887 6899
Q ss_pred HHHHHHHHHcCCCEEEE
Q 017434 295 GTDVFKALALGASGVFV 311 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~i 311 (371)
++++.+|+++|||.|.+
T Consensus 137 ptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 137 PSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999987
No 201
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.80 E-value=0.045 Score=51.66 Aligned_cols=89 Identities=11% Similarity=0.071 Sum_probs=59.3
Q ss_pred HHHHHHHhhcCCCEEEEEccC----------HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 218 KDVKWLQTITSLPILVKGVLT----------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v~~----------~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.|+.+++. +.++++-.... .+.++...++|||.|.+- ++++.+.+.++.+.+ ++|++
T Consensus 148 ~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e---------~~~~~~~~~~i~~~~--~~P~~ 215 (305)
T 3ih1_A 148 QKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE---------ALQSEEEFRLFNSKV--NAPLL 215 (305)
T ss_dssp HHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET---------TCCSHHHHHHHHHHS--CSCBE
T ss_pred HHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc---------CCCCHHHHHHHHHHc--CCCEE
Confidence 446666665 55555544321 244677899999999982 245678888898888 67887
Q ss_pred Ee---cCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 288 LD---GGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 288 a~---GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
++ +|-...-.+.+.-++|...|..|...+.+
T Consensus 216 ~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 216 ANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp EECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHH
T ss_pred EeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 53 34322223455556899999999877765
No 202
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.76 E-value=0.049 Score=52.31 Aligned_cols=228 Identities=16% Similarity=0.162 Sum_probs=122.2
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCCCCCHHHH-hccCCCceEEE-------E---ee--cCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWATSSVEEV-SSTGPGIRFFQ-------L---YV--TKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~~~~~eei-~~~~~~~~~~Q-------L---y~--~~d~~~ 140 (371)
.|++||.++.....+.+--..++++|+++|+..+= .+ ...+++ .... .-|| + |- .-..+.
T Consensus 19 ~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~---~k~~tl~s~~~---~~fq~~~~~~~~y~~~~~~~l~~e~ 92 (349)
T 2wqp_A 19 EPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQT---HIVEDEMSDEA---KQVIPGNADVSIYEIMERCALNEED 92 (349)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEE---CCHHHHCCGGG---GGCCCTTCSSCHHHHHHHHCCCHHH
T ss_pred ceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeee---cccccccCcch---hccccCCCCccHHHHHHHhCCCHHH
Confidence 58999988754322333335899999999998663 32 223333 1111 0012 1 10 135677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCC-ccccccccccccCCCCCCCcchhhhHhhhhcccC-CCHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS-LNWK 218 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 218 (371)
...+.+.+++.|...+. | |. ..+.-|+-..++.|. ++. ..+ ..+.
T Consensus 93 ~~~L~~~~~~~Gi~~~s-t---~~-d~~svd~l~~~~v~~~KI~----------------------------S~~~~n~~ 139 (349)
T 2wqp_A 93 EIKLKEYVESKGMIFIS-T---LF-SRAAALRLQRMDIPAYKIG----------------------------SGECNNYP 139 (349)
T ss_dssp HHHHHHHHHHTTCEEEE-E---EC-SHHHHHHHHHHTCSCEEEC----------------------------GGGTTCHH
T ss_pred HHHHHHHHHHhCCeEEE-e---eC-CHHHHHHHHhcCCCEEEEC----------------------------cccccCHH
Confidence 88888899999987553 2 22 112222222222221 110 011 2456
Q ss_pred HHHHHHhhcCCCEEEEEc-cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCc--cchHHHHHHHHHHhcCCCcEEEecC
Q 017434 219 DVKWLQTITSLPILVKGV-LTAEDA----SLAIQYGAAGIIVSNHGARQLDYV--PATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 219 ~i~~ir~~~~~pv~vK~v-~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
.|+++.+ ++.||++|.. .+.++. +.+.+.|.+.+.+ |+-+..... .-.+..++.+++..+ .+||..++=
T Consensus 140 LL~~va~-~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLl--hc~s~Yp~~~~~~nL~ai~~lk~~f~-~lpVg~sdH 215 (349)
T 2wqp_A 140 LIKLVAS-FGKPIILSTGMNSIESIKKSVEIIREAGVPYALL--HCTNIYPTPYEDVRLGGMNDLSEAFP-DAIIGLSDH 215 (349)
T ss_dssp HHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEE--ECCCCSSCCGGGCCTHHHHHHHHHCT-TSEEEEECC
T ss_pred HHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEE--eccCCCCCChhhcCHHHHHHHHHHCC-CCCEEeCCC
Confidence 6777765 6999999964 466664 4455678866666 332222221 124567777777652 488876552
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhHHHhhhcCChHH---H-HHHHHHHHHHHHHHHHHhCC
Q 017434 292 VRRGTDVFKALALGASGVFVGRPVPFSLAVDGEAG---V-RKVLQMLRDEFELTMALSGC 347 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~l~~~~~~G~~g---v-~~~l~~l~~el~~~m~~~G~ 347 (371)
-....-.+.|+++||+ +|=+.+--.-+..|.++ + -+-+..|.++++..-..+|.
T Consensus 216 t~G~~~~~AAvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 216 TLDNYACLGAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp SSSSHHHHHHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCcHHHHHHHHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 2224455667889999 55554322111222211 0 12345666777777777774
No 203
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.74 E-value=0.0082 Score=54.31 Aligned_cols=38 Identities=32% Similarity=0.459 Sum_probs=34.6
Q ss_pred cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 281 KGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 281 ~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
..+++|+.-|||.+..|+..+...|+|++.||++++.+
T Consensus 171 ~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 171 FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCC
Confidence 45789999999999999999999999999999999864
No 204
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=96.73 E-value=0.012 Score=53.21 Aligned_cols=40 Identities=33% Similarity=0.497 Sum_probs=35.4
Q ss_pred HhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 279 AAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 279 ~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
.+..+++|+.-|||.+..|+..+...|+|++.+|++++.+
T Consensus 172 ~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a 211 (225)
T 1hg3_A 172 KVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKA 211 (225)
T ss_dssp HHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTC
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCC
Confidence 3345789999999999999999999999999999999864
No 205
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.71 E-value=0.0049 Score=55.36 Aligned_cols=81 Identities=22% Similarity=0.242 Sum_probs=61.0
Q ss_pred CHHHHHHHHhhcCCCEE-EEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCC------cEEE
Q 017434 216 NWKDVKWLQTITSLPIL-VKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV------PVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~-vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i------~via 288 (371)
..+.|+.+++.++.+++ ...+.+.++++.+.++|++.|+.-+ .+.+.+..+++. .+ |++.
T Consensus 51 a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~----------~~~evi~~~~~~---~v~~~~~~~~~P 117 (217)
T 3lab_A 51 GLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG----------LTPELIEKAKQV---KLDGQWQGVFLP 117 (217)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHHHHH---HHHCSCCCEEEE
T ss_pred HHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC----------CcHHHHHHHHHc---CCCccCCCeEeC
Confidence 45779999998855443 3446899999999999999996421 123444444432 46 7887
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEE
Q 017434 289 DGGVRRGTDVFKALALGASGVFV 311 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~i 311 (371)
|+.|++++.+++++|+|.|-+
T Consensus 118 --G~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 118 --GVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp --EECSHHHHHHHHHTTCCEEEE
T ss_pred --CCCCHHHHHHHHHcCCCEEEE
Confidence 889999999999999999965
No 206
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.69 E-value=0.0043 Score=56.02 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=61.9
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-TDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~-~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+-++.+.++|+|++++|.+ ..+.+..+++.++ + -++.++||+-. .+..+++..|||.+.+|||+..
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 34578889999999998542 1245667777764 4 68888999843 2567788899999999999986
Q ss_pred hhhcCChHHHHHHHHHHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLRDEFELTMAL 344 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~~el~~~m~~ 344 (371)
+ ..+ .+..+.++++++.....
T Consensus 193 A---~dP---~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 193 A---GNP---LTALRTINKIIEDKVMK 213 (222)
T ss_dssp S---SSH---HHHHHHHHHHHHHHHHH
T ss_pred C---CCH---HHHHHHHHHHHHHHHHH
Confidence 4 222 34556667777665444
No 207
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.63 E-value=0.033 Score=50.02 Aligned_cols=88 Identities=18% Similarity=0.136 Sum_probs=60.7
Q ss_pred HHHHHHHhhcCCCEEE--E-E-------c-cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 218 KDVKWLQTITSLPILV--K-G-------V-LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~v--K-~-------v-~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
+.++.+|+.+++|++- | . + .+.+.++.+.++|+|.|.++..-.... .+....+.+..+++..+ +++|
T Consensus 59 ~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~-~~~~~~~~i~~i~~~~~-~~~v 136 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRH-DGLDIASFIRQVKEKYP-NQLL 136 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCT-TCCCHHHHHHHHHHHCT-TCEE
T ss_pred HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCC-CCccHHHHHHHHHHhCC-CCeE
Confidence 4477788878888841 1 1 1 245789999999999998865321100 01133567777777663 4565
Q ss_pred EEecCCCCHHHHHHHHHcCCCEE
Q 017434 287 FLDGGVRRGTDVFKALALGASGV 309 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V 309 (371)
+. ++.+.+++.++...|||.|
T Consensus 137 ~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 137 MA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEE
T ss_pred EE--eCCCHHHHHHHHHcCCCEE
Confidence 55 6899999999999999999
No 208
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=96.63 E-value=0.086 Score=51.45 Aligned_cols=125 Identities=11% Similarity=0.022 Sum_probs=91.5
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc-
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR- 213 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 213 (371)
..+.+.+.+.++++.+.||+++-+.. +|+. .+.
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~iKik~-spvG---------------------------------------------~~~~ 176 (401)
T 2hzg_A 143 GDTPQETLERARAARRDGFAAVKFGW-GPIG---------------------------------------------RGTV 176 (401)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEES-TTTT---------------------------------------------SSCH
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEcC-CCCC---------------------------------------------CCHH
Confidence 35778788888888899999998764 2220 011
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEEc--c--CHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHH-HhcC
Q 017434 214 SLNWKDVKWLQTIT--SLPILVKGV--L--TAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQ-AAKG 282 (371)
Q Consensus 214 ~~~~~~i~~ir~~~--~~pv~vK~v--~--~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~-~~~~ 282 (371)
....+.++.+|+.+ ++++.++.- . +.++ ++.+.+.|++.|-= ...+..++.+.++++ .+
T Consensus 177 ~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~-- 246 (401)
T 2hzg_A 177 AADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEE--------PFDAGALAAHAALAGRGA-- 246 (401)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEEC--------CSCTTCHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCccCHHHHHHHHhhCC--
Confidence 22457789999987 588888853 5 6666 45677889887741 112346777888876 55
Q ss_pred CCcEEEecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 283 RVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 283 ~i~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
++||++++.+.+..++.+++..| +|.|++-...
T Consensus 247 ~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 280 (401)
T 2hzg_A 247 RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGR 280 (401)
T ss_dssp SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHH
T ss_pred CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcch
Confidence 79999999999999999999987 8999996543
No 209
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.59 E-value=0.2 Score=48.71 Aligned_cols=206 Identities=11% Similarity=0.102 Sum_probs=109.5
Q ss_pred eeecCccc---CcceeecccccccccCChHhHHHHHHHHHcCCcEE-ecCCCCCCHHHHh-ccCCCceEEE---------
Q 017434 66 TTVLGFNI---SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMT-LSSWATSSVEEVS-STGPGIRFFQ--------- 131 (371)
Q Consensus 66 ~~i~G~~~---~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~-~s~~~~~~~eei~-~~~~~~~~~Q--------- 131 (371)
.+|.++.+ ..|++||=+|.....+.+-=..++++|+++|+..+ +.++ ..+++. ... .-||
T Consensus 16 ~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~---k~~tl~s~~~---~~fq~~~~~~~~~ 89 (385)
T 1vli_A 16 FQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMF---QADRMYQKDP---GLYKTAAGKDVSI 89 (385)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCB---CGGGGTSCCC------------CCCH
T ss_pred eeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeee---ccCcccCcch---hhhccCCCCCccH
Confidence 34555544 36899998765432222333588999999999866 3332 222221 111 0122
Q ss_pred --Eee--cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCC-ccccccccccccCCCCCCCcchhhhH
Q 017434 132 --LYV--TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASY 206 (371)
Q Consensus 132 --Ly~--~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (371)
+|- .-..+....+.+.+++.|...+ -+|.. .+.-|+-..++.|. ++.
T Consensus 90 ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~----stpfD-~~svd~l~~~~vd~~KIg----------------------- 141 (385)
T 1vli_A 90 FSLVQSMEMPAEWILPLLDYCREKQVIFL----STVCD-EGSADLLQSTSPSAFKIA----------------------- 141 (385)
T ss_dssp HHHGGGBSSCGGGHHHHHHHHHHTTCEEE----CBCCS-HHHHHHHHTTCCSCEEEC-----------------------
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHcCCcEE----EccCC-HHHHHHHHhcCCCEEEEC-----------------------
Confidence 111 1356777888899999997654 23322 22222222222221 110
Q ss_pred hhhhcccC-CCHHHHHHHHhhcCCCEEEEEc-cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCc--cchHHHHHHHHH
Q 017434 207 VANQIDRS-LNWKDVKWLQTITSLPILVKGV-LTAEDA----SLAIQYGAAGIIVSNHGARQLDYV--PATVMALEEVVQ 278 (371)
Q Consensus 207 ~~~~~~~~-~~~~~i~~ir~~~~~pv~vK~v-~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~--~~~~~~l~~i~~ 278 (371)
..+ ..+..|+++.+ ++.||++|.. .+.++. +.+.+.|.+-|++- |+-+..... .-.+.+++.+++
T Consensus 142 -----S~~~~N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLl-hc~s~YPtp~~~~nL~aI~~Lk~ 214 (385)
T 1vli_A 142 -----SYEINHLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIM-HCVAKYPAPPEYSNLSVIPMLAA 214 (385)
T ss_dssp -----GGGTTCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEE-EECSSSSCCGGGCCTTHHHHHHH
T ss_pred -----cccccCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEE-eccCCCCCChhhcCHHHHHHHHH
Confidence 011 24566777765 6999999964 466664 44456787444432 222222121 124556777776
Q ss_pred HhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEEchhH
Q 017434 279 AAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 279 ~~~~~i~via~GGI~~-~~dv~kal~lGAd~V~iGr~~ 315 (371)
..+ .+||..++=-.. ..-.+.|+++||+ +|=+-|
T Consensus 215 ~f~-~lpVG~SdHt~G~~~~~~AAvAlGA~--iIEkHf 249 (385)
T 1vli_A 215 AFP-EAVIGFSDHSEHPTEAPCAAVRLGAK--LIEKHF 249 (385)
T ss_dssp HST-TSEEEEEECCSSSSHHHHHHHHTTCS--EEEEEB
T ss_pred HcC-CCCEEeCCCCCCchHHHHHHHHcCCC--EEEeCC
Confidence 652 478866553222 4556678899999 555543
No 210
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=96.58 E-value=0.008 Score=55.62 Aligned_cols=42 Identities=24% Similarity=0.562 Sum_probs=36.9
Q ss_pred CHHHHHHHHhhcCCCEEEE-EccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTITSLPILVK-GVLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK-~v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
.++.++++++.+++|+++. |+.+++++..+.++|+|+|.|.+
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 3678999999889999998 46789999999999999999964
No 211
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=96.55 E-value=0.057 Score=48.67 Aligned_cols=104 Identities=21% Similarity=0.125 Sum_probs=74.3
Q ss_pred CHHHHHHHHhhc--CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh---cCCCcEEEec
Q 017434 216 NWKDVKWLQTIT--SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA---KGRVPVFLDG 290 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~via~G 290 (371)
+|+=++.++... ++++-+=.+.+.+.+..+.++|++.|..+ -||-.+.+.+....+.++...+ +-+..|++.
T Consensus 96 T~eGl~A~~~L~~~GI~vN~TliFS~~Qa~~aa~AGa~~iSpF--VgRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~A- 172 (223)
T 1wx0_A 96 TEEGLKACKRLSAEGIKVNMTLIFSANQALLAARAGASYVSPF--LGRVDDISWDGGELLREIVEMIQVQDLPVKVIAA- 172 (223)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEec--cchHhhcCCCHHHHHHHHHHHHHHcCCCeEEeec-
Confidence 454444444332 89998888999999999999999988764 2343344445566666665544 224556654
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchhHHHhhhcC
Q 017434 291 GVRRGTDVFKALALGASGVFVGRPVPFSLAVD 322 (371)
Q Consensus 291 GI~~~~dv~kal~lGAd~V~iGr~~l~~~~~~ 322 (371)
++|++.++.++..+|+|.+-+.-.++..+..+
T Consensus 173 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h 204 (223)
T 1wx0_A 173 SIRHPRHVTEAALLGADIATMPHAVFKQLLKH 204 (223)
T ss_dssp CCCSHHHHHHHHHTTCSEEEECHHHHHHHTCC
T ss_pred ccCCHHHHHHHHHhCCCEEECCHHHHHHHHcC
Confidence 69999999999999999998888888776543
No 212
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.54 E-value=0.21 Score=46.07 Aligned_cols=190 Identities=18% Similarity=0.241 Sum_probs=104.0
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCCCCCHHHHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCc
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFK 154 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~ 154 (371)
|++||=+ ....+++.=..+++.++++|..++- .++... .. ++.|| . -..+..+.+.+.+++.|..
T Consensus 24 ~~vIAgp--c~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkpr-------ts--~~~~~--g-~~~egl~~l~~~~~~~Gl~ 89 (262)
T 1zco_A 24 FTIIAGP--CSIESREQIMKVAEFLAEVGIKVLRGGAFKPR-------TS--PYSFQ--G-YGEKALRWMREAADEYGLV 89 (262)
T ss_dssp CEEEEEC--SBCCCHHHHHHHHHHHHHTTCCEEECBSSCCC-------SS--TTSCC--C-CTHHHHHHHHHHHHHHTCE
T ss_pred cEEEEeC--CCCCCHHHHHHHHHHHHHcCCCEEEEEecccC-------CC--ccccc--C-ccHHHHHHHHHHHHHcCCc
Confidence 7777643 3333444456999999999987664 333211 11 21122 1 1255666666667778876
Q ss_pred EEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC-CCHHHHHHHHhhcCCCEEE
Q 017434 155 AIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS-LNWKDVKWLQTITSLPILV 233 (371)
Q Consensus 155 al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ir~~~~~pv~v 233 (371)
.+. ++--|.. -+.-..+ ++- +. + .... .....++++.+ ++.||++
T Consensus 90 ~~t-e~~d~~~----~~~l~~~-vd~-~k-----------------------I---ga~~~~n~~ll~~~a~-~~kPV~l 135 (262)
T 1zco_A 90 TVT-EVMDTRH----VELVAKY-SDI-LQ-----------------------I---GARNSQNFELLKEVGK-VENPVLL 135 (262)
T ss_dssp EEE-ECCCGGG----HHHHHHH-CSE-EE-----------------------E---CGGGTTCHHHHHHHTT-SSSCEEE
T ss_pred EEE-eeCCHHh----HHHHHhh-CCE-EE-----------------------E---CcccccCHHHHHHHHh-cCCcEEE
Confidence 553 2211111 1110001 000 00 0 0011 13445677665 7999999
Q ss_pred EEcc--CHHHHHH----HHHhCCCEEEEeCCCCcCCC-C--ccchHHHHHHHHHHhcCCCcEEEecCCCCHH-----H-H
Q 017434 234 KGVL--TAEDASL----AIQYGAAGIIVSNHGARQLD-Y--VPATVMALEEVVQAAKGRVPVFLDGGVRRGT-----D-V 298 (371)
Q Consensus 234 K~v~--~~e~a~~----a~~~Gad~I~vs~~gg~~~~-~--~~~~~~~l~~i~~~~~~~i~via~GGI~~~~-----d-v 298 (371)
|... +++++.. +...|.+-+.+--+|++... . -...+.+++.+++.. .+||+++..=..+. . .
T Consensus 136 k~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pVi~d~sH~~g~~~~v~~~~ 213 (262)
T 1zco_A 136 KRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPIIVDPSHPAGRRSLVIPLA 213 (262)
T ss_dssp ECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECSSTTTCSGGGHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCEEEEcCCCCCccchHHHHH
Confidence 9753 6777544 44678766666544544321 1 122455677777765 58998876443332 3 4
Q ss_pred HHHHHcCCCEEEEchhH
Q 017434 299 FKALALGASGVFVGRPV 315 (371)
Q Consensus 299 ~kal~lGAd~V~iGr~~ 315 (371)
..+.++||++++|=+-+
T Consensus 214 ~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 214 KAAYAIGADGIMVEVHP 230 (262)
T ss_dssp HHHHHTTCSEEEEEBCS
T ss_pred HHHHHcCCCEEEEEecC
Confidence 45778999999999865
No 213
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.53 E-value=0.0073 Score=54.90 Aligned_cols=61 Identities=15% Similarity=0.168 Sum_probs=48.0
Q ss_pred CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 249 GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 249 Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
|...|.+-. .|. ....+.+.++++.. +++|++.-|||++++++.++.. |||+|.+|+++..
T Consensus 159 g~~~vY~e~-sG~-----~g~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 159 RLPVMYIEY-SGI-----YGDVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp CCSEEEEEC-TTS-----CCCHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred CCCEEEEec-CCC-----cCCHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 777887754 332 12567788887654 2689999999999999998776 9999999999885
No 214
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=96.53 E-value=0.029 Score=54.73 Aligned_cols=120 Identities=11% Similarity=0.024 Sum_probs=88.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.++||+++-+.+... .+.+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~ 179 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLD------------------------------------------------SLSI 179 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCS------------------------------------------------SHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCC------------------------------------------------hHHH
Confidence 4677777888888899999987643200 0123
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.|+.++.- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||+
T Consensus 180 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa 249 (391)
T 2qgy_A 180 SIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEE--------PVDGENISLLTEIKNTF--NMKVV 249 (391)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEEC--------SSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 457789999987 589998853 456654 5566778887741 11234678888888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++.+.+..++.++++.| +|.|++--
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 276 (391)
T 2qgy_A 250 TGEKQSGLVHFRELISRNAADIFNPDI 276 (391)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 999999999999999987 89999843
No 215
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=96.52 E-value=0.014 Score=56.92 Aligned_cols=119 Identities=16% Similarity=0.106 Sum_probs=88.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.++||+++-+.+++ .+..+
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~------------------------------------------------~~~~~ 194 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPV------------------------------------------------ADDGP 194 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGG------------------------------------------------CTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCC------------------------------------------------CChHH
Confidence 467777788888889999998875421 02335
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
.+.++.+|+.+ +.++.++.- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ ++||+
T Consensus 195 -~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI~ 263 (388)
T 2nql_A 195 -AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFAEA--------PVWTEDIAGLEKVSKNT--DVPIA 263 (388)
T ss_dssp -HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHTSC--CSCEE
T ss_pred -HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 67789999887 588888853 455554 5566778887731 12234677888887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++.+.+..++.+++..| +|.|++-.
T Consensus 264 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 290 (388)
T 2nql_A 264 VGEEWRTHWDMRARIERCRIAIVQPEM 290 (388)
T ss_dssp ECTTCCSHHHHHHHHTTSCCSEECCCH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEecC
Confidence 999999999999999987 89999854
No 216
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.51 E-value=0.014 Score=56.69 Aligned_cols=89 Identities=15% Similarity=0.155 Sum_probs=63.6
Q ss_pred HHHHHHHhhcCCCEEEEEc---cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 218 KDVKWLQTITSLPILVKGV---LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v---~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
+.++++|+.-.+++.+-.. ...+.++.+.++|+|.|++....|. ....++.+.++++..+ +++|++ |.+.+
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~----~~~~~~~I~~ik~~~p-~v~Vi~-G~v~t 159 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAYP-HLEIIG-GNVAT 159 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHCT-TCEEEE-EEECS
T ss_pred HHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCC----CHHHHHHHHHHHHhcC-CCceEe-eeeCC
Confidence 4577777654445444332 2467899999999999998543221 1234566777877763 578776 67899
Q ss_pred HHHHHHHHHcCCCEEEEc
Q 017434 295 GTDVFKALALGASGVFVG 312 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~iG 312 (371)
.+++.++..+|||+|.+|
T Consensus 160 ~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 160 AEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 999999999999999995
No 217
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=96.51 E-value=0.081 Score=51.21 Aligned_cols=128 Identities=12% Similarity=0.108 Sum_probs=92.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.|++++-+.++++..+ + . .+...
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~---------~--~-------------------------------~~~~~ 185 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS---------W--A-------------------------------PDVKM 185 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST---------T--C-------------------------------CCHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc---------c--c-------------------------------cchHH
Confidence 4677777888888889999999887643210 0 0 01223
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ ++||+
T Consensus 186 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa 255 (382)
T 1rvk_A 186 DLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDWIEE--------PMDEQSLSSYKWLSDNL--DIPVV 255 (382)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 457799999987 588888753 456554 5566778887741 11234678888888877 79999
Q ss_pred EecCCCC-HHHHHHHHHcC-CCEEEEchhH
Q 017434 288 LDGGVRR-GTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 288 a~GGI~~-~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
+++.+.+ ..++.+++..| +|.|++--..
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~ 285 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTGVND 285 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEECHHH
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeCchh
Confidence 9999999 99999999987 8999986543
No 218
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=96.51 E-value=0.046 Score=49.12 Aligned_cols=130 Identities=15% Similarity=0.227 Sum_probs=86.9
Q ss_pred eecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcc
Q 017434 133 YVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID 212 (371)
Q Consensus 133 y~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (371)
|...+.+.+.+-++.++++|++.+++-+-++ |
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------d 101 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTS------------------------------------------------N 101 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------T
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------C
Confidence 5444556778888899999999998743211 2
Q ss_pred cCCCHHHHHHHHhhc-CCCEEEEEc------cCHH-HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCC
Q 017434 213 RSLNWKDVKWLQTIT-SLPILVKGV------LTAE-DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV 284 (371)
Q Consensus 213 ~~~~~~~i~~ir~~~-~~pv~vK~v------~~~e-~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i 284 (371)
..++.+.++++.+.. ++|+++=-. .++. ..+.+.+.|++.|-.|+. ..-......++.|+++.+...+++
T Consensus 102 g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~--~~~~~a~~g~~~L~~Lv~~a~~ri 179 (224)
T 2bdq_A 102 NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGS--SNGEPIIENIKHIKALVEYANNRI 179 (224)
T ss_dssp SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSC--SSCCCGGGGHHHHHHHHHHHTTSS
T ss_pred CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCC--CCCCcHHHHHHHHHHHHHhhCCCe
Confidence 234556666666554 677776432 2333 357889999999987543 211113445667777777666689
Q ss_pred cEEEecCCCCHHHHHHHH-HcCCCEEEEch
Q 017434 285 PVFLDGGVRRGTDVFKAL-ALGASGVFVGR 313 (371)
Q Consensus 285 ~via~GGI~~~~dv~kal-~lGAd~V~iGr 313 (371)
.|++-|||+ .+++.+.+ .+|++.+=..+
T Consensus 180 ~Im~GgGV~-~~Ni~~l~~~tGv~e~H~s~ 208 (224)
T 2bdq_A 180 EIMVGGGVT-AENYQYICQETGVKQAHGTR 208 (224)
T ss_dssp EEEECSSCC-TTTHHHHHHHHTCCEEEETT
T ss_pred EEEeCCCCC-HHHHHHHHHhhCCCEEcccc
Confidence 999999998 57777776 48999887543
No 219
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.43 E-value=0.0031 Score=64.66 Aligned_cols=76 Identities=18% Similarity=0.177 Sum_probs=57.3
Q ss_pred HHHHHHHHhCCCEEEEeCCCCc-CCC-CccchHHHHHHHHHHhcCCCcEEEecCCCCH-----------HHHHHHHHcCC
Q 017434 240 EDASLAIQYGAAGIIVSNHGAR-QLD-YVPATVMALEEVVQAAKGRVPVFLDGGVRRG-----------TDVFKALALGA 306 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~-~~~-~~~~~~~~l~~i~~~~~~~i~via~GGI~~~-----------~dv~kal~lGA 306 (371)
+.|+.+.+.|+|.|++.+-.+. ... ......+.+.++++.+ .+||++.|||++. +++.+++.+||
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGa 361 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGA 361 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHcCC
Confidence 4578888999999998764321 100 1233567777777665 7999999999998 45999999999
Q ss_pred CEEEEchhHHH
Q 017434 307 SGVFVGRPVPF 317 (371)
Q Consensus 307 d~V~iGr~~l~ 317 (371)
|.|.||+..+.
T Consensus 362 d~V~igt~~~~ 372 (555)
T 1jvn_A 362 DKVSIGTDAVY 372 (555)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECCHHhh
Confidence 99999998754
No 220
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.41 E-value=0.012 Score=52.72 Aligned_cols=80 Identities=13% Similarity=0.143 Sum_probs=57.3
Q ss_pred HHHHHHHHhhcC-CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017434 217 WKDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 295 (371)
Q Consensus 217 ~~~i~~ir~~~~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~ 295 (371)
.+.++.+++.++ +-+....+.+.++++.+.++|+|+|+..+ .+.+ +.+.++.. .++++. |+.|+
T Consensus 55 ~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~----------~d~~-v~~~~~~~--g~~~i~--G~~t~ 119 (214)
T 1wbh_A 55 VDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG----------LTEP-LLKAATEG--TIPLIP--GISTV 119 (214)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS----------CCHH-HHHHHHHS--SSCEEE--EESSH
T ss_pred HHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC----------CCHH-HHHHHHHh--CCCEEE--ecCCH
Confidence 456888888874 33333345778999999999999997521 1122 22333334 477776 49999
Q ss_pred HHHHHHHHcCCCEEEE
Q 017434 296 TDVFKALALGASGVFV 311 (371)
Q Consensus 296 ~dv~kal~lGAd~V~i 311 (371)
+++.+++.+|||.|.+
T Consensus 120 ~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 120 SELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999998
No 221
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=96.40 E-value=0.025 Score=55.18 Aligned_cols=119 Identities=12% Similarity=0.064 Sum_probs=88.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.+.+.++++.++||+++-+.++.+ +..+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~~ 193 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQP------------------------------------------------DGALD 193 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC------------------------------------------------CHHHH
Confidence 677777888888899999987754210 11234
Q ss_pred HHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 217 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||++
T Consensus 194 ~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~ 263 (393)
T 2og9_A 194 IARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEE--------PLDAYDHEGHAALALQF--DTPIAT 263 (393)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHHhC--CCCEEe
Confidence 57789999986 588888742 456664 4556778887741 11234677888888877 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++.+.+..++.++++.| +|.|++--
T Consensus 264 dE~~~~~~~~~~~i~~~~~d~v~ik~ 289 (393)
T 2og9_A 264 GEMLTSAAEHGDLIRHRAADYLMPDA 289 (393)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CCCcCCHHHHHHHHHCCCCCEEeeCc
Confidence 99999999999999988 89998854
No 222
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=96.38 E-value=0.12 Score=49.66 Aligned_cols=121 Identities=7% Similarity=0.015 Sum_probs=88.7
Q ss_pred CChHHHHHHHHHHHH-cCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 136 KHRNVDAQLVKRAER-AGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~-aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
.+++.+.+.++++.+ .||+++-+.++++ ++.
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~------------------------------------------------~~~ 172 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGAR------------------------------------------------TPA 172 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSS------------------------------------------------CHH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCC------------------------------------------------ChH
Confidence 567777778888888 9999998765421 011
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ +.++.+..- .+.++ ++.+.+.|++.|- -...+..++.+.++++.+ ++||
T Consensus 173 ~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--------qP~~~~~~~~~~~l~~~~--~ipI 242 (370)
T 1nu5_A 173 QDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVE--------QPVPRANFGALRRLTEQN--GVAI 242 (370)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEE--------CCSCTTCHHHHHHHHHHC--SSEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceEe--------CCCCcccHHHHHHHHHhC--CCCE
Confidence 2356788888876 478887753 45555 4556778988774 112234678888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++++.+.+..|+.+++..| +|.|++--.
T Consensus 243 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (370)
T 1nu5_A 243 LADESLSSLSSAFELARDHAVDAFSLKLC 271 (370)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred EeCCCCCCHHHHHHHHHhCCCCEEEEchh
Confidence 9999999999999999987 899999643
No 223
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=96.36 E-value=0.044 Score=53.11 Aligned_cols=117 Identities=13% Similarity=0.083 Sum_probs=85.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.++||+++-+.+.. +..+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 174 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA-------------------------------------------------DWQS 174 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC-------------------------------------------------CHHH
Confidence 577888888889999999999876532 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.|+.++.- .+.+++ +.+.+.|+ .|- + --+ .++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------~--P~~-~~~~~~~l~~~~--~iPI~ 241 (379)
T 2rdx_A 175 DIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILE-------Q--PCR-SYEECQQVRRVA--DQPMK 241 (379)
T ss_dssp HHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEE-------C--CSS-SHHHHHHHHTTC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEe-------C--CcC-CHHHHHHHHhhC--CCCEE
Confidence 457789999987 488888753 466665 33445566 542 1 011 677788887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
+++.+.+..++.++++.| +|.|++-..
T Consensus 242 ~de~i~~~~~~~~~i~~~~~d~v~ik~~ 269 (379)
T 2rdx_A 242 LDECVTGLHMAQRIVADRGAEICCLKIS 269 (379)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEEEEETT
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEecc
Confidence 999999999999999987 899999553
No 224
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.35 E-value=0.014 Score=52.62 Aligned_cols=80 Identities=24% Similarity=0.243 Sum_probs=57.6
Q ss_pred HHHHHHHHhhcC-CCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017434 217 WKDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 295 (371)
Q Consensus 217 ~~~i~~ir~~~~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~ 295 (371)
.+.++.+++.++ +-+....+.+.++++.+.++|+|+|+..+ .+.+.+..+++ . .++++. |+.|+
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~----------~d~~v~~~ar~-~--g~~~i~--Gv~t~ 120 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG----------LNPKIVKLCQD-L--NFPITP--GVNNP 120 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHH-T--TCCEEC--EECSH
T ss_pred HHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC----------CCHHHHHHHHH-h--CCCEEe--ccCCH
Confidence 456888888874 33333445688999999999999995321 12333444444 4 466665 49999
Q ss_pred HHHHHHHHcCCCEEEE
Q 017434 296 TDVFKALALGASGVFV 311 (371)
Q Consensus 296 ~dv~kal~lGAd~V~i 311 (371)
+++.+++.+|||.|.+
T Consensus 121 ~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 121 MAIEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999999
No 225
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.0062 Score=56.28 Aligned_cols=68 Identities=22% Similarity=0.100 Sum_probs=55.8
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
.+.|+...+.|++.+.+-.-. . ...+.+.++.+.+ .+||...|||++. |+.+++ +||+-|.+|+..+.
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~-----~--~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLG-----P--NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEES-----S--SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHHHHHHHHcCCCEEEEEeCC-----C--CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Confidence 356888999999999884311 1 4577888888877 6999999999987 999999 99999999998764
No 226
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=96.24 E-value=0.039 Score=53.77 Aligned_cols=120 Identities=13% Similarity=0.049 Sum_probs=89.2
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.|++++-+.+++ ++.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~-------------------------------------------------~~~ 179 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGR-------------------------------------------------APR 179 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCS-------------------------------------------------CHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCC-------------------------------------------------CHH
Confidence 4677888888888888999999876542 011
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHH-HHhcCCCc
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV-QAAKGRVP 285 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~-~~~~~~i~ 285 (371)
.+.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.+++ +.. ++|
T Consensus 180 ~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~--~iP 249 (389)
T 3ozy_A 180 KDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFEE--------PLSIDDIEGHRILRAQGT--PVR 249 (389)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEES--------CSCTTCHHHHHHHHTTCC--SSE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhcCC--CCC
Confidence 2457788999887 578888753 456554 5567789888841 12233577788887 655 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 286 VFLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
|++++.+.+..|+.+++..| +|.|++--
T Consensus 250 Ia~dE~i~~~~~~~~~i~~~~~d~v~ik~ 278 (389)
T 3ozy_A 250 IATGENLYTRNAFNDYIRNDAIDVLQADA 278 (389)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999999987 89998864
No 227
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.22 E-value=0.073 Score=48.81 Aligned_cols=90 Identities=18% Similarity=0.231 Sum_probs=64.3
Q ss_pred CHHHHHHHHhhcCCCEEEEEc-cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 216 NWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v-~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
..++++.+|+.+++||+-|.- .++..+..+..+|||+|.+...- + ...++..+.+....+ .+.++++ +.+
T Consensus 89 s~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~---l--~~~~l~~l~~~a~~l--Gl~~lvE--v~~ 159 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI---L--TAEQIKEIYEAAEEL--GMDSLVE--VHS 159 (251)
T ss_dssp CTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG---S--CHHHHHHHHHHHHTT--TCEEEEE--ECS
T ss_pred CHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc---C--CHHHHHHHHHHHHHc--CCeEEEE--eCC
Confidence 347899999999999999963 44556777999999999885421 1 112333333333333 5666664 789
Q ss_pred HHHHHHHHHc-CCCEEEEchh
Q 017434 295 GTDVFKALAL-GASGVFVGRP 314 (371)
Q Consensus 295 ~~dv~kal~l-GAd~V~iGr~ 314 (371)
.+++..++.+ |++.|++-..
T Consensus 160 ~eE~~~A~~l~g~~iIGinnr 180 (251)
T 1i4n_A 160 REDLEKVFSVIRPKIIGINTR 180 (251)
T ss_dssp HHHHHHHHTTCCCSEEEEECB
T ss_pred HHHHHHHHhcCCCCEEEEeCc
Confidence 9999999999 9999988764
No 228
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.15 E-value=0.0043 Score=54.36 Aligned_cols=143 Identities=10% Similarity=0.026 Sum_probs=88.0
Q ss_pred ceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhH
Q 017434 127 IRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY 206 (371)
Q Consensus 127 ~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (371)
...|-|+. +-..+.+.+++++++| +-++|++|... |++ . ...+-+|
T Consensus 33 ~~ifll~g--~I~~L~~iv~~ik~~g-K~vivh~DlI~----------GLs------~---------------d~~ai~f 78 (188)
T 1vkf_A 33 DVVFLLKS--DILNLKFHLKILKDRG-KTVFVDMDFVN----------GLG------E---------------GEEAILF 78 (188)
T ss_dssp SEEEECCE--ETTTHHHHHHHHHHTT-CEEEEEGGGEE----------TCC------S---------------SHHHHHH
T ss_pred CEEEEEeC--cHHHHHHHHHHHHHCC-CeEEEecCccc----------ccC------C---------------CHHHHHH
Confidence 34555554 3345888999999986 55667877422 111 0 0112234
Q ss_pred hhhhcccCC----CHHHHHHHHhhcCCCEEEEEcc----C-HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHH
Q 017434 207 VANQIDRSL----NWKDVKWLQTITSLPILVKGVL----T-AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV 277 (371)
Q Consensus 207 ~~~~~~~~~----~~~~i~~ir~~~~~pv~vK~v~----~-~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~ 277 (371)
+ ...+++. ....++..++. ++..+-+.-. + ...++...+..+|.+.+- ++ +-..+.+.++
T Consensus 79 L-~~~~pdGIIsTk~~~i~~Akk~-GL~tIqR~FliDs~al~~~~~~I~~~kPD~iEiL-------Pg-~v~p~~I~~v- 147 (188)
T 1vkf_A 79 V-KKAGADGIITIKPKNYVVAKKN-GIPAVLRFFALDSKAVERGIEQIETLGVDVVEVL-------PG-AVAPKVARKI- 147 (188)
T ss_dssp H-HHHTCSEEEESCHHHHHHHHHT-TCCEEEEEECCSHHHHHHHHHHHHHHTCSEEEEE-------SG-GGHHHHHTTS-
T ss_pred H-HhcCCCEEEcCcHHHHHHHHHc-CCEEeeEEEEEEeHHHhhhhhhccccCCCeEeec-------CC-CchHHHHHHh-
Confidence 4 3333432 12445555553 6665555421 2 223455667889988773 11 2123444444
Q ss_pred HHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhh
Q 017434 278 QAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSL 319 (371)
Q Consensus 278 ~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~ 319 (371)
.++|||+.|+|++.+|+.+ +.+||++|..++.-+|.+
T Consensus 148 ----~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 148 ----PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWKM 184 (188)
T ss_dssp ----TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHTC
T ss_pred ----cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhCC
Confidence 3789999999999999999 999999999999988853
No 229
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.14 E-value=0.012 Score=53.29 Aligned_cols=111 Identities=15% Similarity=0.183 Sum_probs=76.7
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+.+...++++.+.+.|++.+.++...+
T Consensus 34 ~~~~~~~~~~~~al~~gGv~~iel~~k~~--------------------------------------------------- 62 (225)
T 1mxs_A 34 IAREEDILPLADALAAGGIRTLEVTLRSQ--------------------------------------------------- 62 (225)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEESSST---------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCc---------------------------------------------------
Confidence 35666667788888888888887764210
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
...+.++.+++.+ ++-+....+.+.++++.+.++|+|+|+.. + .+.+ +.+.++.. .++++. |+.
T Consensus 63 ~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p---~-------~d~~-v~~~~~~~--g~~~i~--G~~ 127 (225)
T 1mxs_A 63 HGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTP---G-------ITED-ILEAGVDS--EIPLLP--GIS 127 (225)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECS---S-------CCHH-HHHHHHHC--SSCEEC--EEC
T ss_pred cHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeC---C-------CCHH-HHHHHHHh--CCCEEE--eeC
Confidence 0134577777776 34444445678899999999999999642 1 1122 23333334 467765 499
Q ss_pred CHHHHHHHHHcCCCEEEE
Q 017434 294 RGTDVFKALALGASGVFV 311 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~i 311 (371)
|++++.+++.+|||.|.+
T Consensus 128 t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 128 TPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp SHHHHHHHHTTTCCEEEE
T ss_pred CHHHHHHHHHCCCCEEEE
Confidence 999999999999999998
No 230
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=96.07 E-value=0.058 Score=51.96 Aligned_cols=121 Identities=13% Similarity=0.166 Sum_probs=86.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.++. ++..
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 170 (369)
T 2p8b_A 140 ADPENMAEEAASMIQKGYQSFKMKVGT-------------------------------------------------NVKE 170 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCS-------------------------------------------------CHHH
T ss_pred CChHHHHHHHHHHHHcCcCEEEEEeCC-------------------------------------------------CHHH
Confidence 577777788888889999999876531 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHHH-HH----HHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDAS-LA----IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~-~a----~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
..+.++.+|+.+ +.|+.+..- .+.+++. .. .+.|++.|- -...+..++.+.++++.+ ++||
T Consensus 171 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~iPI 240 (369)
T 2p8b_A 171 DVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWIE--------QPVIADDIDAMAHIRSKT--DLPL 240 (369)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEE--------CCBCTTCHHHHHHHHHTC--CSCE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEE--------CCCCcccHHHHHHHHHhC--CCCE
Confidence 457788888887 578877753 3455554 33 345666553 112234677888888776 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
++++.+.+..++.+++..| +|.|++--..
T Consensus 241 ~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (369)
T 2p8b_A 241 MIDEGLKSSREMRQIIKLEAADKVNIKLMK 270 (369)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred EeCCCCCCHHHHHHHHHhCCCCEEEeecch
Confidence 9999999999999999987 8999996543
No 231
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=96.04 E-value=0.05 Score=53.11 Aligned_cols=119 Identities=13% Similarity=0.172 Sum_probs=86.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.++. +...
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-------------------------------------------------~~~~ 174 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGG-------------------------------------------------PLKA 174 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccC-------------------------------------------------CHHH
Confidence 577777788888888999998775431 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa 244 (397)
T 2qde_A 175 DIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKIEQ--------PLPAWDLDGMARLRGKV--ATPIY 244 (397)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 457788898886 588888742 456654 4556778887641 11234677788887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++.+.+..++.+++..| +|.|++--
T Consensus 245 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 245 ADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999987 89999843
No 232
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.04 E-value=0.035 Score=51.03 Aligned_cols=72 Identities=22% Similarity=0.190 Sum_probs=57.6
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
.+.|+...++||++|.|-.-.+. -....+.+..+++.+ ++||+.-++|.+..++..++++|||+|.++...+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~----f~G~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHR----FGGSLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSS----SCCCHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhh----hccCHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 46688899999999998532111 112456777787877 7999999999999999999999999999998765
No 233
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.02 E-value=0.051 Score=54.04 Aligned_cols=90 Identities=23% Similarity=0.266 Sum_probs=66.3
Q ss_pred HHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017434 217 WKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG 295 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~ 295 (371)
.++++.+|+.+++||+-|. +.++.....+..+|||+|-+...- ++ ...+..+.+....+ .+.++++ |++.
T Consensus 97 ~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~---l~--~~~l~~l~~~a~~l--gm~~LvE--vh~~ 167 (452)
T 1pii_A 97 FNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSV---LD--DDQYRQLAAVAHSL--EMGVLTE--VSNE 167 (452)
T ss_dssp TTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTT---CC--HHHHHHHHHHHHHT--TCEEEEE--ECSH
T ss_pred HHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEccc---CC--HHHHHHHHHHHHHc--CCeEEEE--eCCH
Confidence 4678999999999999886 355566777999999999886431 11 23344444444444 5677774 7999
Q ss_pred HHHHHHHHcCCCEEEEchhH
Q 017434 296 TDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 296 ~dv~kal~lGAd~V~iGr~~ 315 (371)
+++..++.+|++.|++--.=
T Consensus 168 eE~~~A~~lga~iIGinnr~ 187 (452)
T 1pii_A 168 EEQERAIALGAKVVGINNRD 187 (452)
T ss_dssp HHHHHHHHTTCSEEEEESEE
T ss_pred HHHHHHHHCCCCEEEEeCCC
Confidence 99999999999999987543
No 234
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.02 E-value=0.39 Score=45.19 Aligned_cols=67 Identities=18% Similarity=0.047 Sum_probs=44.8
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~---GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
++...++|||.|.+- ++.+.+.+.++.+.++ .+|+.++ ||-...-.+.+.-++|...|..+..++.+
T Consensus 184 a~ay~eAGAD~ifi~---------~~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~ra 253 (307)
T 3lye_A 184 LRAARDEGADVGLLE---------GFRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAP 253 (307)
T ss_dssp HHHHHHTTCSEEEEC---------CCSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHH
T ss_pred HHHHHHCCCCEEEec---------CCCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHH
Confidence 566789999999882 2456778888888874 3777553 44221122444446799999888866653
No 235
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=95.98 E-value=0.054 Score=52.89 Aligned_cols=119 Identities=13% Similarity=0.070 Sum_probs=87.2
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.+.+.++++.+.||+++-+.++.+ +....
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~d 206 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQP------------------------------------------------NCAED 206 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCC------------------------------------------------CHHHH
Confidence 677777788888889999987754310 11224
Q ss_pred HHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 217 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||++
T Consensus 207 ~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 276 (398)
T 2pp0_A 207 IRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEE--------PLDAYDIEGHAQLAAAL--DTPIAT 276 (398)
T ss_dssp HHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCceeeC--------CCChhhHHHHHHHHhhC--CCCEEe
Confidence 57789999886 588888753 456654 4556678877641 11234678888888877 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++.+.+..++.+++..| +|.|++--
T Consensus 277 dE~~~~~~~~~~~i~~~~~d~v~ik~ 302 (398)
T 2pp0_A 277 GEMLTSFREHEQLILGNASDFVQPDA 302 (398)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999988 89988853
No 236
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.95 E-value=0.023 Score=54.95 Aligned_cols=68 Identities=18% Similarity=0.036 Sum_probs=52.9
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.+.++.+.++|+|.|++....|. ....++.+..+++..+ ++||++ |+|.|.+++.++..+|||+|.+|
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAH----AKYVGKTLKSLRQLLG-SRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCS----SHHHHHHHHHHHHHHT-TCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhcC-CCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 45688999999999998632221 1234567888887764 688887 67999999999999999999985
No 237
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.92 E-value=0.68 Score=42.91 Aligned_cols=207 Identities=21% Similarity=0.234 Sum_probs=109.9
Q ss_pred CCCccceeecCccc--CcceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCCCCCHHHHhccCCCceEEEEeecC
Q 017434 60 SKIDMTTTVLGFNI--SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWATSSVEEVSSTGPGIRFFQLYVTK 136 (371)
Q Consensus 60 ~~~d~s~~i~G~~~--~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~~~~~eei~~~~~~~~~~QLy~~~ 136 (371)
..-++.+++.+..+ ..|++||=.. ...+.+-=..++++++++|..++- ..+...+ . +.-||- -
T Consensus 21 ~~~~~~i~i~~~~iG~~~~~vIAgpc--~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprt-------s--~~~f~g---~ 86 (276)
T 1vs1_A 21 ERRETVVEVEGVRIGGGSKAVIAGPC--SVESWEQVREAALAVKEAGAHMLRGGAFKPRT-------S--PYSFQG---L 86 (276)
T ss_dssp SCSCCCEEETTEEEBTTBCEEEEECS--BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCS-------S--TTSCCC---C
T ss_pred CCCCcEEEECCEEECCCCeEEEEecC--CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCC-------C--hhhhcC---C
Confidence 33455555554333 1377766543 222333345889999999988764 2222211 1 111331 1
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
..+....+.+.+++.|...+. ++--|.. -+.-..+ ++- +. .++ . ....
T Consensus 87 g~~gl~~l~~~~~~~Gl~~~t-e~~d~~~----~~~l~~~-vd~-~k---------------Igs---------~-~~~n 134 (276)
T 1vs1_A 87 GLEGLKLLRRAGDEAGLPVVT-EVLDPRH----VETVSRY-ADM-LQ---------------IGA---------R-NMQN 134 (276)
T ss_dssp THHHHHHHHHHHHHHTCCEEE-ECCCGGG----HHHHHHH-CSE-EE---------------ECG---------G-GTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEE-ecCCHHH----HHHHHHh-CCe-EE---------------ECc---------c-cccC
Confidence 355666666667788887653 2211111 1110001 000 00 000 0 0113
Q ss_pred HHHHHHHHhhcCCCEEEEEcc--CHHHHHH----HHHhCCCEEEEeCCCCcCCCC---ccchHHHHHHHHHHhcCCCcEE
Q 017434 217 WKDVKWLQTITSLPILVKGVL--TAEDASL----AIQYGAAGIIVSNHGARQLDY---VPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v~--~~e~a~~----a~~~Gad~I~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~i~vi 287 (371)
...++++. .++.||++|..+ ++++... +...|.+-+++--+|.+.... -...+..++.+++.. .+||+
T Consensus 135 ~~ll~~~a-~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~--~lpVi 211 (276)
T 1vs1_A 135 FPLLREVG-RSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT--HLPVI 211 (276)
T ss_dssp HHHHHHHH-HHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB--SSCEE
T ss_pred HHHHHHHH-ccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh--CCCEE
Confidence 44566665 468999999753 6666443 456787666654335443222 223566777777765 58998
Q ss_pred Eec----CCCC--HHHHHHHHHcCCCEEEEchhH
Q 017434 288 LDG----GVRR--GTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 288 a~G----GI~~--~~dv~kal~lGAd~V~iGr~~ 315 (371)
++. |.+. ..=...++++||++++|=+-+
T Consensus 212 ~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 212 VDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp ECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 754 4332 233556788999999999865
No 238
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.92 E-value=0.055 Score=50.23 Aligned_cols=71 Identities=18% Similarity=0.083 Sum_probs=57.0
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+.|+...+.||++|.|-.-.+. . ....+.|..+++.+ ++||+.-..|.+..++.++.++|||+|.++...+
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~--f--~Gs~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPS--F--QGAPEFLTAARQAC--SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTT--T--CCCHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHCCCCEEEEeccccc--c--CCCHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 5588889999999998543221 1 12456778888777 7999999999999999999999999999998755
No 239
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=95.92 E-value=0.21 Score=47.89 Aligned_cols=121 Identities=13% Similarity=0.157 Sum_probs=86.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.++++ +...
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 170 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKD------------------------------------------------DIAT 170 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCC------------------------------------------------CHHH
Confidence 4677777778888889999998765321 1112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHH--hCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCc
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQ--YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~--~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 285 (371)
..+.++.+|+.+ +.++.+..- .+.+++ +.+.+ .|++.|- -...+..++.+.++++.. ++|
T Consensus 171 d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~ip 240 (366)
T 1tkk_A 171 DIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVE--------QPVHKDDLAGLKKVTDAT--DTP 240 (366)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEE--------CCSCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEE--------CCCCcccHHHHHHHHhhC--CCC
Confidence 457788888887 578887752 455554 45556 5665552 112234678888888877 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 286 VFLDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
|++++.+.+..|+.+++..| +|.|++--.
T Consensus 241 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 241 IMADESVFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp EEECTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EEEcCCCCCHHHHHHHHHhCCCCEEEeehh
Confidence 99999999999999999987 899998643
No 240
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.89 E-value=0.42 Score=44.79 Aligned_cols=67 Identities=13% Similarity=0.019 Sum_probs=47.7
Q ss_pred HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 241 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~---GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
-++...++|||.|.+- ++.+.+.+.++.+.+ ++|++++ +|-...-++.+.-++|...|..|...+.
T Consensus 176 Ra~ay~~AGAD~if~~---------~~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~r 244 (298)
T 3eoo_A 176 RAIAYVEAGADMIFPE---------AMKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYR 244 (298)
T ss_dssp HHHHHHHTTCSEEEEC---------CCCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHH
T ss_pred HHHhhHhcCCCEEEeC---------CCCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHH
Confidence 3566789999999882 245678888888888 5888664 4322122345555689999999987776
Q ss_pred h
Q 017434 318 S 318 (371)
Q Consensus 318 ~ 318 (371)
+
T Consensus 245 a 245 (298)
T 3eoo_A 245 A 245 (298)
T ss_dssp H
T ss_pred H
Confidence 5
No 241
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=95.88 E-value=0.025 Score=52.59 Aligned_cols=40 Identities=28% Similarity=0.303 Sum_probs=35.2
Q ss_pred HHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 217 WKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
.+.++++|+.+++|+++.. +.++++++.+.+.|+|+++|.
T Consensus 197 ~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 197 HALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp HHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4678999999999999975 568999999999999999995
No 242
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=95.87 E-value=0.14 Score=49.69 Aligned_cols=88 Identities=13% Similarity=0.106 Sum_probs=67.3
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|- -...+..++.+.++++.. .+||+
T Consensus 180 d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~iPIa 249 (383)
T 3i4k_A 180 DTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFE--------QPTPADDLETLREITRRT--NVSVM 249 (383)
T ss_dssp HHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEE--------SCSCTTCHHHHHHHHHHH--CCEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--------CCCChhhHHHHHHHHhhC--CCCEE
Confidence 457789999987 478888753 455554 556778888774 112233577788888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++.+.+..|+.+++..| +|.|++--
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 250 ADESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp ESTTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred ecCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 999999999999999987 89999864
No 243
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=95.86 E-value=0.3 Score=47.37 Aligned_cols=118 Identities=13% Similarity=0.051 Sum_probs=84.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.+.+.++++.+.||+++-+.++.+ +....
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~~ 176 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHR------------------------------------------------DFDRD 176 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCS------------------------------------------------SHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCC------------------------------------------------CHHHH
Confidence 677777888888899999998765320 01124
Q ss_pred HHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHH--hCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 217 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQ--YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~--~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
.+.++.+|+.+ +.++.+..- .+.+++ +.+.+ .+++.|- -...+..++.+.++++.++ ++||
T Consensus 177 ~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iE--------qP~~~~~~~~~~~l~~~~~-~iPI 247 (389)
T 2oz8_A 177 LRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVE--------DPILRHDHDGLRTLRHAVT-WTQI 247 (389)
T ss_dssp HHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEE--------SCBCTTCHHHHHHHHHHCC-SSEE
T ss_pred HHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEe--------CCCCCcCHHHHHHHHhhCC-CCCE
Confidence 57788999887 577887642 455554 45566 5555442 1112336778888887652 5999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
++++.+ +..|+.+++..| +|.|++.
T Consensus 248 a~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 248 NSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp EECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred EeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999 999999999988 8999996
No 244
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=95.82 E-value=0.065 Score=53.03 Aligned_cols=133 Identities=18% Similarity=0.185 Sum_probs=92.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.+.+|.... .+. .|. . .+...
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~------~G~-~~~-----------------------~------~~~~~ 188 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR------GGH-MPA-----------------------M------TDISL 188 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT------CCB-CCC-----------------------H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc------cCC-Ccc-----------------------h------hhHHH
Confidence 47778888888888899999998876653100 000 000 0 01223
Q ss_pred CHHHHHHHHhhc--CCCEEEEE--ccCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKG--VLTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~--v~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+.. ..+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||+
T Consensus 189 d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa 258 (433)
T 3rcy_A 189 SVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEE--------PVPPDNVGAMAQVARAV--RIPVA 258 (433)
T ss_dssp HHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHS--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEEC--------CCChhhHHHHHHHHhcc--CCCEE
Confidence 567799999987 57888764 2566664 4556778887741 12233678888888887 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
+++.+.+..|+.++++.| +|.|++--.
T Consensus 259 ~dE~~~~~~~~~~~l~~g~~D~v~~d~~ 286 (433)
T 3rcy_A 259 TGERLTTKAEFAPVLREGAAAILQPALG 286 (433)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred ecCCCCCHHHHHHHHHcCCCCEEEeCch
Confidence 999999999999999987 899888643
No 245
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=95.81 E-value=0.27 Score=46.11 Aligned_cols=71 Identities=18% Similarity=0.082 Sum_probs=49.7
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
+.++...++|||.|.+-. +.++.+.+.++.+.++.++|++++-+-....++.+.-++|...|.+|...+.+
T Consensus 174 ~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMHS--------KKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHHHHHHHTTCSEEEECC--------CSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHHHHHHHcCCCEEEEcC--------CCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 347788999999999831 13456777888888854599998743111123555556899999999887764
No 246
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.80 E-value=0.022 Score=57.18 Aligned_cols=250 Identities=16% Similarity=0.141 Sum_probs=134.7
Q ss_pred hccccceeecccc-CCCCCCccceeec-CcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHh
Q 017434 44 NAFSRILFRPRIL-RDVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS 121 (371)
Q Consensus 44 ~~~~~~~l~pr~l-~~~~~~d~s~~i~-G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~ 121 (371)
..||++.|+|... .+..++|+++++- ...+..||+.+||...+ +..++.+..+.|....+.. ..+.+++.
T Consensus 12 ~~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt------~~eLa~av~~~Gg~G~i~~--~~~~e~~~ 83 (491)
T 1zfj_A 12 YTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVT------GSKMAIAIARAGGLGVIHK--NMSITEQA 83 (491)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECC--SSCHHHHH
T ss_pred CChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhcc------HHHHHHHHHHcCCceEEeC--CCCHHHHH
Confidence 4799999999764 3457899998874 35778999999998543 4467788888887766642 24444322
Q ss_pred -------ccCC--CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEec--C--CCCCcchhHHhhhhcCCCCcccccccc
Q 017434 122 -------STGP--GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTV--D--TPRLGRREADIKNRFVLPPHLTLKNYE 188 (371)
Q Consensus 122 -------~~~~--~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtv--d--~p~~g~r~~d~~~~~~~p~~~~~~~~~ 188 (371)
+... .+-.+-+. ......+.++...+.+...+.|.= + ..+.-...+|+.... +.......+.
T Consensus 84 ~~i~~v~~~~~im~~~~~~v~---~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~--~~~~~v~~im 158 (491)
T 1zfj_A 84 EEVRKVKRSENGVIIDPFFLT---PEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS--DYNAPISEHM 158 (491)
T ss_dssp HHHHHHHHHTTTTSSSCCCBC---SSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--CSSSBTTTSC
T ss_pred HHHHHHhhHHhcCcCCCeEEC---CCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--cCCCcHHHHc
Confidence 1111 11111111 122345667777777887776532 0 111001223332110 0000000000
Q ss_pred cc-ccCCCC-CCCcchhhhHhhhh-------cc------cCCCHHH-HHHHHh-----hcCCCEEEEEcc-----CHHHH
Q 017434 189 GL-YIGKMD-KTDDSGLASYVANQ-------ID------RSLNWKD-VKWLQT-----ITSLPILVKGVL-----TAEDA 242 (371)
Q Consensus 189 ~~-~~~~~~-~~~~~~~~~~~~~~-------~~------~~~~~~~-i~~ir~-----~~~~pv~vK~v~-----~~e~a 242 (371)
.. ...... ..........+... .| .-.+.++ ++.+.+ ....++.+.+.. ..+.+
T Consensus 159 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a 238 (491)
T 1zfj_A 159 TSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERA 238 (491)
T ss_dssp CCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHH
T ss_pred CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHH
Confidence 00 000000 00000000000000 00 0113333 444432 001222222222 25889
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
+.+.++|+|.|.++..+|. ....++.+..+++.++ .+|++ .|+|.+.+++.+++++|||+|.+|
T Consensus 239 ~~l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~p-~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 239 EALFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHFP-NRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHCS-SSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHcCCCeEEEeeecCc----chhHHHHHHHHHHHCC-CCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 9999999999999764332 1235677888887764 68998 899999999999999999999888
No 247
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.78 E-value=0.024 Score=53.30 Aligned_cols=158 Identities=13% Similarity=0.032 Sum_probs=89.6
Q ss_pred CcceeecccccccccCChHhHHHHHHHHHcCCc-EEecCCCC----------CCHH---H----HhccCCCceEEEEeec
Q 017434 74 SMPIMIAPTAFQKMAHPEGECATARAASAAGTI-MTLSSWAT----------SSVE---E----VSSTGPGIRFFQLYVT 135 (371)
Q Consensus 74 ~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~-~~~s~~~~----------~~~e---e----i~~~~~~~~~~QLy~~ 135 (371)
..|+++.-++ . .++.-...++.+.+.|.. ++.=.+++ .+.+ + +++..+-|.++.+.+.
T Consensus 93 ~~p~~~~i~g-~---~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAG-M---SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECC-S---SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCC-C---CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 4677665442 1 233334778888888866 44211210 0222 2 2223345788888876
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+...++++.++++|+++|.++ +....+.. -+.+..- |. ..... . ..+ ++.....+.
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~-~~~~~g~~-i~~~~~~--~~-~~~~~----------~--~gG----~sg~~~~~~ 227 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSV-NSIGNGLF-IDPEAES--VV-IKPKD----------G--FGG----IGGAYIKPT 227 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEEC-CCEEEEEC-EETTTTE--ES-CSGGG----------G--EEE----EESGGGHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEec-CCCCcCce-eccCCCC--cc-cccCC----------C--CCc----cccccccHH
Confidence 677777888999999999999875 22110000 0000000 00 00000 0 000 000001123
Q ss_pred CHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
.++.++++++.+ ++||+.-+ +.+++++..++.+|||+|.+.
T Consensus 228 ~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 578899999998 89988665 579999999999999999984
No 248
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=95.75 E-value=0.13 Score=49.92 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=85.3
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.|++++-+.+++. +.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~~-------------------------------------------------~~ 173 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGGD-------------------------------------------------VE 173 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSC-------------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCCC-------------------------------------------------HH
Confidence 35778888888888889999998766430 11
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHHH----HHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDAS----LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~----~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
.+.+.++.+|+.+ +.++.++.- .+.+++. .+.+.|+ .|- + -.+.++.+.++++.. ++||
T Consensus 174 ~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------q---P~~~~~~~~~l~~~~--~iPI 240 (378)
T 3eez_A 174 RDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFE-------Q---PGETLDDIAAIRPLH--SAPV 240 (378)
T ss_dssp HHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEE-------C---CSSSHHHHHHTGGGC--CCCE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEe-------c---CCCCHHHHHHHHhhC--CCCE
Confidence 2356788888887 578888753 4566643 3445565 442 1 112566777777665 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
++++.+.+..|+.++++.| +|.|++....
T Consensus 241 a~dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 241 SVDECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred EECCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 9999999999999999987 8999997644
No 249
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=95.74 E-value=0.081 Score=52.03 Aligned_cols=128 Identities=13% Similarity=0.040 Sum_probs=92.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.++.... + + + .+...
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~-----d------------------------------g-~------~~~~~ 215 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPK-----D------------------------------G-M------PGMRE 215 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGG-----G------------------------------H-H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcc-----c------------------------------c-c------chHHH
Confidence 577888888888888999999887653100 0 0 0 01223
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.++.+..- .++++| +.+.+.|++.|-= ...+..++.+.++++.. .+||+
T Consensus 216 die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa 285 (412)
T 3stp_A 216 NLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEE--------PVIADDVAGYAELNAMN--IVPIS 285 (412)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhCC--CCCEE
Confidence 567899999987 578888753 466664 4566778887741 12233677888888876 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
+++.+.+..|+.++++.| +|.|++--..
T Consensus 286 ~dE~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 286 GGEHEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEecChhh
Confidence 999999999999999987 8999886544
No 250
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=95.73 E-value=0.14 Score=49.94 Aligned_cols=126 Identities=14% Similarity=0.019 Sum_probs=90.4
Q ss_pred CChHHHHHHH-HHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 136 KHRNVDAQLV-KRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 136 ~d~~~~~~~~-~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
.+++.+.+.+ +++.+.|++++-+.++.+... .. .++.
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~----------------~~--------------------------~~~~ 175 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTR----------------CD--------------------------VDIP 175 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC----------------CS--------------------------CCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc----------------cc--------------------------cCHH
Confidence 4567777777 777788999998877543110 00 1122
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
.+.+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||
T Consensus 176 ~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI 245 (393)
T 4dwd_A 176 GDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYSWFEE--------PVQHYHVGAMGEVAQRL--DITV 245 (393)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEEC--------CSCTTCHHHHHHHHHHC--SSEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHhhC--CCCE
Confidence 3467799999987 679998853 456654 5567788888741 12233677888888876 7999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
+++..+.+..|+.++++.|+|.|++--
T Consensus 246 a~dE~~~~~~~~~~~i~~~~d~v~~k~ 272 (393)
T 4dwd_A 246 SAGEQTYTLQALKDLILSGVRMVQPDI 272 (393)
T ss_dssp EBCTTCCSHHHHHHHHHHTCCEECCCT
T ss_pred EecCCcCCHHHHHHHHHcCCCEEEeCc
Confidence 999999999999999998899998854
No 251
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.72 E-value=0.91 Score=42.21 Aligned_cols=180 Identities=13% Similarity=0.154 Sum_probs=107.5
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~~ 141 (371)
|.++.|+ -.+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.+...- ..+.+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4445666 33334444445777777788986654 2 23345665532 12 22 45666654 3466677
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+- -| + ..-..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f~ 119 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIV--SPYYN-----------KP---T-----------------------------QEGIYQHFK 119 (292)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEc--CCCCC-----------CC---C-----------------------------HHHHHHHHH
Confidence 789999999999999874 23320 00 0 001234456
Q ss_pred HHHhhcCCCEEEEEc-------cCHHHHHHHHH-h-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 222 WLQTITSLPILVKGV-------LTAEDASLAIQ-Y-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v-------~~~e~a~~a~~-~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
.+.+.+++|+++=.+ .+++...++.+ . .+-+|+-+. .++..+.++.+..+++..|+ +|
T Consensus 120 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~----------gd~~~~~~~~~~~~~~f~v~-~G-- 186 (292)
T 2vc6_A 120 AIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDAT----------GNLLRPSLERMACGEDFNLL-TG-- 186 (292)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHSCTTSEEE-ES--
T ss_pred HHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCC----------CCHHHHHHHHHHcCCCEEEE-EC--
Confidence 777788999998653 56787777765 3 344444432 12334555555555466665 45
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+...++.++.+|++++.-+.+-+
T Consensus 187 -~d~~~~~~l~~G~~G~is~~~n~ 209 (292)
T 2vc6_A 187 -EDGTALGYMAHGGHGCISVTANV 209 (292)
T ss_dssp -CGGGHHHHHHTTCCEEEESGGGT
T ss_pred -chHHHHHHHHcCCCEEEecHHHh
Confidence 24557888999999999887543
No 252
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.71 E-value=0.059 Score=50.43 Aligned_cols=92 Identities=23% Similarity=0.335 Sum_probs=59.3
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-. .-..+.+..+.+.+.+++|||+.-|-.+-.++++ +-.+|||+|++-.|++
T Consensus 29 v~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 108 (292)
T 3daq_A 29 VNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYY 108 (292)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 3556789999999976543211111 1123455666666677899998666666677664 4447999999999988
Q ss_pred HhhhcCChHHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLRD 336 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~~ 336 (371)
+.. .++++.++++.+.+
T Consensus 109 ~~~---~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 109 NKT---NQRGLVKHFEAIAD 125 (292)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 753 45665555555443
No 253
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=95.70 E-value=0.25 Score=47.73 Aligned_cols=119 Identities=15% Similarity=0.129 Sum_probs=85.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.+++| ++..
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 175 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGS------------------------------------------------DPAQ 175 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCC------------------------------------------------ChHH
Confidence 5778788888888889999998765432 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHHHHHHH---hCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDASLAIQ---YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~~a~~---~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
..+.++.+|+.+ +.++.++.- .+.+++....+ .|+ .|- + . -+ .++.+.++++.+ ++||++
T Consensus 176 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~iE-------q-P-~~-d~~~~~~l~~~~--~iPI~~ 242 (378)
T 2qdd_A 176 DIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WIE-------Q-P-CQ-TLDQCAHVARRV--ANPIML 242 (378)
T ss_dssp HHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EEE-------C-C-SS-SHHHHHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EEE-------c-C-CC-CHHHHHHHHHhC--CCCEEE
Confidence 457788999887 578888753 46677644332 343 321 1 0 12 677888887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
++.+.+..++.+++..| +|.|++-...
T Consensus 243 dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 243 DECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 99999999999999987 8999996543
No 254
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.66 E-value=0.098 Score=47.92 Aligned_cols=126 Identities=13% Similarity=0.165 Sum_probs=83.8
Q ss_pred eecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcc
Q 017434 133 YVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID 212 (371)
Q Consensus 133 y~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (371)
|...+.+.+.+-++.++++|++.+++-+-+| |
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------d 98 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDV------------------------------------------------D 98 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------T
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------C
Confidence 4444555777788889999999998743211 2
Q ss_pred cCCCHHHHHHHHhhc-CCCEEEEEc----cCHHH-HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 213 RSLNWKDVKWLQTIT-SLPILVKGV----LTAED-ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 213 ~~~~~~~i~~ir~~~-~~pv~vK~v----~~~e~-a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
..++.+.++++.+.. ++|+++=-. .++.. .+.+.++|++.|-.|+... .....++.|+++.+... ++.|
T Consensus 99 g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~----~a~~g~~~L~~Lv~~a~-~i~I 173 (256)
T 1twd_A 99 GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKS----DALQGLSKIMELIAHRD-APII 173 (256)
T ss_dssp SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSS----STTTTHHHHHHHHTSSS-CCEE
T ss_pred CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCC----CHHHHHHHHHHHHHhhC-CcEE
Confidence 234556666666655 567665432 33443 5778999999998765321 22334556666665544 7899
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 287 FLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
++-|||+ .+++.+.+.+|++.+=.+
T Consensus 174 m~GgGv~-~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 174 MAGAGVR-AENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp EEESSCC-TTTHHHHHHHTCSEEEEC
T ss_pred EecCCcC-HHHHHHHHHcCCCeEeEC
Confidence 9999997 677777778899988865
No 255
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=95.66 E-value=0.044 Score=48.72 Aligned_cols=110 Identities=25% Similarity=0.240 Sum_probs=76.9
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+.+...+.++.+.+.|++.+.++..+|
T Consensus 21 ~~~~~~~~~~~~~l~~gGv~~iel~~k~~--------------------------------------------------- 49 (207)
T 2yw3_A 21 VRGGEDLLGLARVLEEEGVGALEITLRTE--------------------------------------------------- 49 (207)
T ss_dssp CCSCCCHHHHHHHHHHTTCCEEEEECSST---------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCh---------------------------------------------------
Confidence 34556666788888889999888764221
Q ss_pred CCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 215 LNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
...+.++.+++ -++.+....+.+.++++.+.++|+|+++..+ .+...+..+++ . .++++. |+.|
T Consensus 50 ~~~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~----------~d~~v~~~~~~-~--g~~~i~--G~~t 113 (207)
T 2yw3_A 50 KGLEALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG----------LLEEVAALAQA-R--GVPYLP--GVLT 113 (207)
T ss_dssp HHHHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHHHH-H--TCCEEE--EECS
T ss_pred HHHHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC----------CCHHHHHHHHH-h--CCCEEe--cCCC
Confidence 01245677776 4555655556788999999999999996531 12233333333 3 467766 4999
Q ss_pred HHHHHHHHHcCCCEEEE
Q 017434 295 GTDVFKALALGASGVFV 311 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~i 311 (371)
.+++.++...|||.|.+
T Consensus 114 ~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 114 PTEVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999998
No 256
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.66 E-value=0.069 Score=49.95 Aligned_cols=90 Identities=16% Similarity=0.293 Sum_probs=58.0
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l~ 317 (371)
+.+++.|+|+|.+.+..|-...-. .-..+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||+|++-.|+++
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3tak_A 29 EWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYN 108 (291)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 456789999999866544211111 1123456666666777899998666556666664 44589999999999987
Q ss_pred hhhcCChHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~ 335 (371)
.. .++++.++++.+.
T Consensus 109 ~~---~~~~l~~~f~~ia 123 (291)
T 3tak_A 109 KP---TQEGLYQHYKAIA 123 (291)
T ss_dssp CC---CHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHH
Confidence 43 4566555554443
No 257
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.65 E-value=0.073 Score=49.95 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=57.5
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l~ 317 (371)
+.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|+++
T Consensus 35 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 114 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYN 114 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 4567899999999765442111111 123455666667777899998656556666554 33489999999999987
Q ss_pred hhhcCChHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~ 335 (371)
.. .++++.++++.+.
T Consensus 115 ~~---~~~~l~~~f~~va 129 (297)
T 3flu_A 115 KP---SQEGIYQHFKTIA 129 (297)
T ss_dssp CC---CHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHH
Confidence 43 3555555544443
No 258
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=95.59 E-value=0.24 Score=43.84 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=57.3
Q ss_pred HHHHHHHHhhcCCCEEEEEc--cCHHHHHHHHHhCCCEEEEeCC----CCc--CCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 217 WKDVKWLQTITSLPILVKGV--LTAEDASLAIQYGAAGIIVSNH----GAR--QLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v--~~~e~a~~a~~~Gad~I~vs~~----gg~--~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.+.++.+++ ++|++ |.+ .+.++...+.+..+|++.+.+. ||+ ..|| +.+..+. ..+.|++.
T Consensus 88 ~~~~~~l~~--~~~vi-ka~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw-----~~l~~~~---~~~~p~~L 156 (205)
T 1nsj_A 88 IELCRKIAE--RILVI-KAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDW-----SLILPYR---DRFRYLVL 156 (205)
T ss_dssp HHHHHHHHT--TSEEE-EEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCG-----GGTGGGG---GGSSCEEE
T ss_pred HHHHHHHhc--CCCEE-EEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCH-----HHHHhhh---cCCCcEEE
Confidence 355666653 36766 543 4455665555556999999764 443 2333 3333221 12579999
Q ss_pred ecCCCCHHHHHHHHH-cCCCEEEEchhH
Q 017434 289 DGGVRRGTDVFKALA-LGASGVFVGRPV 315 (371)
Q Consensus 289 ~GGI~~~~dv~kal~-lGAd~V~iGr~~ 315 (371)
.||+. ++++.+++. .++.+|=+.+-+
T Consensus 157 AGGL~-peNV~~ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 157 SGGLN-PENVRSAIDVVRPFAVDVSSGV 183 (205)
T ss_dssp ESSCC-TTTHHHHHHHHCCSEEEESGGG
T ss_pred ECCCC-HHHHHHHHHhcCCCEEEECCce
Confidence 99995 899999987 699999999855
No 259
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=95.59 E-value=0.043 Score=53.20 Aligned_cols=120 Identities=9% Similarity=0.078 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCH
Q 017434 138 RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNW 217 (371)
Q Consensus 138 ~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (371)
++.+.+.++++.+.||+++-+.++++. .++..+.
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g----------------------------------------------~~~~~d~ 180 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMG----------------------------------------------DDPDTDY 180 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTT----------------------------------------------SCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCC----------------------------------------------CCHHHHH
Confidence 377777888888899999988765320 0122345
Q ss_pred HHHHHHHhhc--CCCEEEEEc--cC-HHHHH----HHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 218 KDVKWLQTIT--SLPILVKGV--LT-AEDAS----LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 218 ~~i~~ir~~~--~~pv~vK~v--~~-~e~a~----~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
+.++.+|+.+ +.++.+..- .+ .++|. .+.+.|++.|-= ...+..++.+.++++.. .+||++
T Consensus 181 ~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~ 250 (374)
T 3sjn_A 181 AIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEE--------PVLADSLISYEKLSRQV--SQKIAG 250 (374)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEEC--------SSCTTCHHHHHHHHHHC--SSEEEE
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEEC--------CCCcccHHHHHHHHhhC--CCCEEe
Confidence 7789999986 578888753 56 76654 445667777741 11233677888888876 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++.+.+..|+.++++.| +|.|++--
T Consensus 251 dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 251 GESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp CTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999976 89988754
No 260
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.58 E-value=0.081 Score=49.79 Aligned_cols=94 Identities=18% Similarity=0.196 Sum_probs=60.0
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFY 117 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCC
Confidence 35567899999999665442111111 123455666666667899987555545555553 3347999999999998
Q ss_pred HhhhcCChHHHHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLRDEF 338 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~~el 338 (371)
+.. .++++.++++.+.+..
T Consensus 118 ~~~---s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 118 YPF---SFEEHCDHYRAIIDSA 136 (303)
T ss_dssp SCC---CHHHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHHhC
Confidence 753 4677766666655543
No 261
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.57 E-value=0.097 Score=49.29 Aligned_cols=91 Identities=14% Similarity=0.212 Sum_probs=57.9
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||++++-.|++
T Consensus 43 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 122 (304)
T 3cpr_A 43 AAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY 122 (304)
T ss_dssp HHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677899999999765442111111 123456666666777899987655555566554 3347999999999987
Q ss_pred HhhhcCChHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~ 335 (371)
+.. .++++.++++.+.
T Consensus 123 ~~~---~~~~l~~~f~~ia 138 (304)
T 3cpr_A 123 SKP---SQEGLLAHFGAIA 138 (304)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 642 3566655554443
No 262
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.54 E-value=0.079 Score=50.57 Aligned_cols=91 Identities=12% Similarity=0.073 Sum_probs=56.9
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+++.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 35567899999999765442111111 123456666666777899987555445555543 3347999999999988
Q ss_pred HhhhcCChHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~ 335 (371)
+.. .++++.++++.+.
T Consensus 141 ~~~---s~~~l~~~f~~VA 156 (332)
T 2r8w_A 141 TPL---TQEEAYHHFAAVA 156 (332)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 652 4565555554443
No 263
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.54 E-value=0.069 Score=50.55 Aligned_cols=91 Identities=18% Similarity=0.284 Sum_probs=58.1
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.+..|-...-.. --.+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 50 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (314)
T 3qze_A 50 VDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYY 129 (314)
T ss_dssp HHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 35567899999999655332111111 123455666667777899998666556666664 3348999999999988
Q ss_pred HhhhcCChHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~ 335 (371)
+.. .++++.++++.+.
T Consensus 130 ~~~---s~~~l~~~f~~va 145 (314)
T 3qze_A 130 NKP---TQEGMYQHFRHIA 145 (314)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 743 3555555554443
No 264
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.53 E-value=0.082 Score=49.71 Aligned_cols=90 Identities=19% Similarity=0.290 Sum_probs=56.5
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYY 118 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 35567899999999665442111111 123455666666777899987655555555554 3347999999999988
Q ss_pred HhhhcCChHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l 334 (371)
+.. .++++.++++.+
T Consensus 119 ~~~---s~~~l~~~f~~v 133 (301)
T 1xky_A 119 NKP---SQEGMYQHFKAI 133 (301)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 455555554443
No 265
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=95.53 E-value=0.25 Score=47.29 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=85.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.|++++-+.+++. +..
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~-------------------------------------------------~~~ 168 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTG-------------------------------------------------IEA 168 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCC-------------------------------------------------HHH
Confidence 5777777777888889999987765321 112
Q ss_pred CHHHHHHHHhhc--CCCEEEEE--ccCHHHHHH----HHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKG--VLTAEDASL----AIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~--v~~~e~a~~----a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+.. ..+.+++.+ +.+.|++.|- -...+..++.+.++++.. .+||+
T Consensus 169 d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~iPIa 238 (354)
T 3jva_A 169 DIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVE--------QPVKRRDLEGLKYVTSQV--NTTIM 238 (354)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEE--------CCSCTTCHHHHHHHHHHC--SSEEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--------CCCChhhHHHHHHHHHhC--CCCEE
Confidence 356788888887 57788774 256666543 3344554443 112233577788888876 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
+++.+.+..|+.+++..| +|.|++--..
T Consensus 239 ~dE~~~~~~~~~~~l~~~~~d~v~~k~~~ 267 (354)
T 3jva_A 239 ADESCFDAQDALELVKKGTVDVINIKLMK 267 (354)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEECchh
Confidence 999999999999999986 7999987543
No 266
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.52 E-value=0.067 Score=50.40 Aligned_cols=90 Identities=20% Similarity=0.282 Sum_probs=57.6
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.+..|-...-. .-..+.+..+.+.+.+++|||+.-|=.+-.++++ +-++|||+|++-.|++
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 121 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYY 121 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 3556789999999976544211111 1123456666677777899998666556666654 3347999999999998
Q ss_pred HhhhcCChHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l 334 (371)
+.. .++++.++++.+
T Consensus 122 ~~~---s~~~l~~~f~~v 136 (304)
T 3l21_A 122 SKP---PQRGLQAHFTAV 136 (304)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 753 355554444443
No 267
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=95.50 E-value=0.43 Score=45.16 Aligned_cols=189 Identities=14% Similarity=0.080 Sum_probs=104.7
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEecCCC-------------CCCHHHHh-------ccC-CCceEEEE-e
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWA-------------TSSVEEVS-------STG-PGIRFFQL-Y 133 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~-------------~~~~eei~-------~~~-~~~~~~QL-y 133 (371)
..+..|.++ |...|+.+.++|+..++.+.+ ..+++|+. +.. .-|...=+ +
T Consensus 39 ~~i~~~~ay--------D~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~ 110 (318)
T 1zlp_A 39 GSVLMPGVQ--------DALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDT 110 (318)
T ss_dssp SSEEEEEEC--------SHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTT
T ss_pred CcEEEecCC--------CHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCC
Confidence 345667554 558999999999987753321 12444432 233 12222211 1
Q ss_pred ecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 134 VTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 134 ~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
++.+.+...+.+++..++|+.++-|- |.. .|++..- +.+ . .. .+.
T Consensus 111 Gyg~~~~v~~tv~~l~~aGaagv~iE-D~~--------------~~k~cgH--~~g-----------k---~L----~p~ 155 (318)
T 1zlp_A 111 GGGGPLNVQRFIRELISAGAKGVFLE-DQV--------------WPKKCGH--MRG-----------K---AV----VPA 155 (318)
T ss_dssp CSSSHHHHHHHHHHHHHTTCCEEEEE-CBC--------------SSCCCSS--SSC-----------C---CB----CCH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEC-CCC--------------CCccccC--CCC-----------C---cc----CCH
Confidence 12366666777777778888887653 211 1221110 000 0 00 000
Q ss_pred CCCHHHHHHHHhhc-CCCEEEEEcc----------CHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC
Q 017434 214 SLNWKDVKWLQTIT-SLPILVKGVL----------TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 282 (371)
Q Consensus 214 ~~~~~~i~~ir~~~-~~pv~vK~v~----------~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~ 282 (371)
....+.|+.+++.. ..++.+-... ..+.++...++|||.|.+- ++++.+.+.++.+.+
T Consensus 156 ~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e---------~~~~~e~~~~i~~~l-- 224 (318)
T 1zlp_A 156 EEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVE---------APANVDELKEVSAKT-- 224 (318)
T ss_dssp HHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEEC---------CCCSHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEc---------CCCCHHHHHHHHHhc--
Confidence 11123455555543 2344444331 1245778899999999982 346678888898888
Q ss_pred CCcEEEe---cCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 283 RVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 283 ~i~via~---GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
++|++++ +|-...-++.+.-++|...|.+|...+.+
T Consensus 225 ~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 263 (318)
T 1zlp_A 225 KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVYA 263 (318)
T ss_dssp CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHHHH
T ss_pred CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHH
Confidence 6898543 33222233455556899999999987764
No 268
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.50 E-value=0.086 Score=49.21 Aligned_cols=91 Identities=22% Similarity=0.312 Sum_probs=57.2
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677899999999765442111111 123455666666777899987555555555553 3347999999999988
Q ss_pred HhhhcCChHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~ 335 (371)
+.. .++++.++++.+.
T Consensus 107 ~~~---s~~~l~~~f~~ia 122 (289)
T 2yxg_A 107 NKP---TQEGLRKHFGKVA 122 (289)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 643 4555555554443
No 269
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.50 E-value=0.062 Score=50.91 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=58.4
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.+..|-...-.. -..+.+..+++.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 128 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYY 128 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 35577899999998665432111111 123456666667777899998666556666664 4458999999999988
Q ss_pred HhhhcCChHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~ 335 (371)
+.. .++++.++++.+.
T Consensus 129 ~~~---~~~~l~~~f~~va 144 (315)
T 3si9_A 129 NRP---NQRGLYTHFSSIA 144 (315)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 643 3555555544443
No 270
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.48 E-value=0.73 Score=42.61 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~G 290 (371)
++|+.+.++|||.|.+-. .+ .+...++.+.+ ++|+|.-|
T Consensus 165 ~rA~a~~eAGA~~ivlE~---------vp-~~~a~~it~~l--~iP~igIG 203 (275)
T 1o66_A 165 NDAKAHDDAGAAVVLMEC---------VL-AELAKKVTETV--SCPTIGIG 203 (275)
T ss_dssp HHHHHHHHTTCSEEEEES---------CC-HHHHHHHHHHC--SSCEEEES
T ss_pred HHHHHHHHcCCcEEEEec---------CC-HHHHHHHHHhC--CCCEEEEC
Confidence 567889999999999832 33 35677888888 79999876
No 271
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.46 E-value=0.085 Score=49.38 Aligned_cols=90 Identities=19% Similarity=0.255 Sum_probs=56.8
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677899999999765442111111 123455666666667899987656555565553 3347999999999988
Q ss_pred HhhhcCChHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l 334 (371)
+.. .++++.++++.+
T Consensus 107 ~~~---s~~~l~~~f~~v 121 (294)
T 2ehh_A 107 NKP---TQRGLYEHFKTV 121 (294)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 643 455555444443
No 272
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=95.45 E-value=0.1 Score=45.82 Aligned_cols=42 Identities=24% Similarity=0.376 Sum_probs=38.0
Q ss_pred HHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeCC
Q 017434 217 WKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSNH 258 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~~ 258 (371)
.+.++++++.++.|+++.| +.+.|++..++++||++|+.|+.
T Consensus 139 p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 139 PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 3679999999999999997 57899999999999999999874
No 273
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.43 E-value=0.085 Score=49.38 Aligned_cols=91 Identities=11% Similarity=0.139 Sum_probs=58.0
Q ss_pred HHHHH-hCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 243 SLAIQ-YGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 243 ~~a~~-~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
+.+++ .|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 31 ~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (293)
T 1f6k_A 31 RHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFY 110 (293)
T ss_dssp HHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45678 89999999665432111111 123456666666777899987666555666654 3347999999999998
Q ss_pred HhhhcCChHHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLRD 336 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~~ 336 (371)
+.. .++++.++++.+.+
T Consensus 111 ~~~---~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 111 YKF---SFPEIKHYYDTIIA 127 (293)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 653 35666555555443
No 274
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.42 E-value=0.095 Score=49.48 Aligned_cols=93 Identities=18% Similarity=0.179 Sum_probs=56.0
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l~ 317 (371)
+.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||++++-.|+++
T Consensus 36 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~ 115 (309)
T 3fkr_A 36 DFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHG 115 (309)
T ss_dssp HHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBT
T ss_pred HHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCc
Confidence 5567899999999665332111111 123456666666677899998655555555553 33479999999999762
Q ss_pred hhhcCChHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~ 335 (371)
....-.++++.++++.+.
T Consensus 116 ~~~~~s~~~l~~~f~~va 133 (309)
T 3fkr_A 116 ATFRVPEAQIFEFYARVS 133 (309)
T ss_dssp TTBCCCHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHH
Confidence 111124565555544443
No 275
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.40 E-value=0.064 Score=50.83 Aligned_cols=91 Identities=18% Similarity=0.110 Sum_probs=58.1
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.+..|-...-.. --.+.+..+++.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 130 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISY 130 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 35577899999998665332111111 123456666666777899998666556666654 4458999999999998
Q ss_pred HhhhcCChHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~ 335 (371)
+.. .++++.++++.+.
T Consensus 131 ~~~---s~~~l~~~f~~va 146 (315)
T 3na8_A 131 WKL---NEAEVFQHYRAVG 146 (315)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 753 3555555544443
No 276
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.38 E-value=0.082 Score=49.46 Aligned_cols=89 Identities=13% Similarity=0.213 Sum_probs=56.1
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH----cCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALA----LGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~----lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++... +|||+|++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 28 IDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 35567889999999765442111111 123456666666777899987666556666664332 7999999999987
Q ss_pred HhhhcCChHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQM 333 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~ 333 (371)
+.. .++++.++++.
T Consensus 108 ~~~---s~~~l~~~f~~ 121 (292)
T 2ojp_A 108 NRP---SQEGLYQHFKA 121 (292)
T ss_dssp SCC---CHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHH
Confidence 642 34555444433
No 277
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.38 E-value=0.051 Score=52.68 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=68.7
Q ss_pred CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhh
Q 017434 126 GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS 205 (371)
Q Consensus 126 ~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (371)
.|.++.+-+.-+.+.+.++++.++++|+++|.++= +.. + |.. ...|. . .+ ... +
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~n-tt~-~-r~~-----~~~~~-~--~~----------~~g--G--- 274 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTN-TTV-S-RPA-----GLQGA-L--RS----------ETG--G--- 274 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECC-CBS-C-CCT-----TCCCT-T--TT----------SSS--E---
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC-CCc-c-ccc-----ccccc-c--cc----------ccC--C---
Confidence 58899988766777888999999999999998752 211 1 100 00000 0 00 000 0
Q ss_pred HhhhhcccCCCHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 206 YVANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 206 ~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
++.....+..++.|+++++.+ ++||+.-| +.+.+|+..++++|||+|.+.
T Consensus 275 -lSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 275 -LSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp -EEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred -cCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 000011234678899999999 79988654 689999999999999999984
No 278
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.35 E-value=0.086 Score=49.36 Aligned_cols=93 Identities=14% Similarity=0.155 Sum_probs=58.7
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||+|++-.|++
T Consensus 30 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 109 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSY 109 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 35567899999999765442111111 123445555666667899987655555555553 3347999999999998
Q ss_pred Hh-hhcCChHHHHHHHHHHHHH
Q 017434 317 FS-LAVDGEAGVRKVLQMLRDE 337 (371)
Q Consensus 317 ~~-~~~~G~~gv~~~l~~l~~e 337 (371)
+. . .++++.++++.+.+.
T Consensus 110 ~~~~---s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 110 FKNV---SDDGLFAWFSAVFSK 128 (294)
T ss_dssp SCSC---CHHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHHh
Confidence 75 3 466666666555443
No 279
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=95.34 E-value=0.21 Score=44.52 Aligned_cols=127 Identities=17% Similarity=0.096 Sum_probs=81.2
Q ss_pred eecCChHHHHHHHHHHHHcCCcEEEEec-CCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhc
Q 017434 133 YVTKHRNVDAQLVKRAERAGFKAIALTV-DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQI 211 (371)
Q Consensus 133 y~~~d~~~~~~~~~~a~~aG~~al~vtv-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (371)
....|...+.+.++.+.+.|++.+-+.+ |.++. |
T Consensus 17 i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~-------------~-------------------------------- 51 (230)
T 1rpx_A 17 ILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFV-------------P-------------------------------- 51 (230)
T ss_dssp GGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSS-------------S--------------------------------
T ss_pred eecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcc-------------c--------------------------------
Confidence 3456777788889999999999887654 22110 0
Q ss_pred ccCCCHHHHHHHHhhcCCCEEEEEc-cCH-HHHHHHHHhCCCEEEEeCC--CCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 212 DRSLNWKDVKWLQTITSLPILVKGV-LTA-EDASLAIQYGAAGIIVSNH--GARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 212 ~~~~~~~~i~~ir~~~~~pv~vK~v-~~~-e~a~~a~~~Gad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+..+..+.++++++.++.|+.+-.. .++ +.++.+.++|+|+|+++.. .. ....+.+..+++. .+.++
T Consensus 52 ~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~------~~~~~~~~~~~~~---g~~ig 122 (230)
T 1rpx_A 52 NITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSST------IHLHRTINQIKSL---GAKAG 122 (230)
T ss_dssp CBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTC------SCHHHHHHHHHHT---TSEEE
T ss_pred ccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCccc------hhHHHHHHHHHHc---CCcEE
Confidence 0112357789999888778776654 344 3688899999999999543 11 1223344444332 34555
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
.+=--.+..+.++++..|+|.|.+.+
T Consensus 123 ~~~~p~t~~e~~~~~~~~~d~vl~~~ 148 (230)
T 1rpx_A 123 VVLNPGTPLTAIEYVLDAVDLVLIMS 148 (230)
T ss_dssp EEECTTCCGGGGTTTTTTCSEEEEES
T ss_pred EEeCCCCCHHHHHHHHhhCCEEEEEE
Confidence 55333466677777778999885544
No 280
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=95.34 E-value=0.2 Score=48.25 Aligned_cols=117 Identities=15% Similarity=0.104 Sum_probs=83.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.++. +...
T Consensus 145 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 175 (371)
T 2ps2_A 145 GEPEDMRARVAKYRAKGYKGQSVKISG-------------------------------------------------EPVT 175 (371)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHhChheEEeecCC-------------------------------------------------CHHH
Confidence 577878888888889999999876531 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHHH----HH-HHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDAS----LA-IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~----~a-~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
..+.++.+|+.+ +.++.+..- .+.+++. .+ .+.|+ .|- .. .+.++.+.++++.+ ++||
T Consensus 176 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE---~P-------~~~~~~~~~l~~~~--~iPI 242 (371)
T 2ps2_A 176 DAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALE---AP-------CATWRECISLRRKT--DIPI 242 (371)
T ss_dssp HHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEE---CC-------BSSHHHHHHHHTTC--CSCE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCc---CC-------cCCHHHHHHHHhhC--CCCE
Confidence 457788888877 578877742 4666653 33 44455 432 00 11677788887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++++.+.+..++.+++..| +|.|++--.
T Consensus 243 ~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (371)
T 2ps2_A 243 IYDELATNEMSIVKILADDAAEGIDLKIS 271 (371)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEEEHH
T ss_pred EeCCCcCCHHHHHHHHHhCCCCEEEechh
Confidence 9999999999999999987 899998543
No 281
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=95.34 E-value=0.071 Score=51.74 Aligned_cols=119 Identities=11% Similarity=0.076 Sum_probs=84.0
Q ss_pred CCh---HHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcc
Q 017434 136 KHR---NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQID 212 (371)
Q Consensus 136 ~d~---~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (371)
.++ +.+.+.++++.+.||+++-+.+..+ +
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~ 166 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGGT------------------------------------------------S 166 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSSS------------------------------------------------C
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCCC------------------------------------------------C
Confidence 466 7777778888889999988754310 1
Q ss_pred cCCCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHh-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCC
Q 017434 213 RSLNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGR 283 (371)
Q Consensus 213 ~~~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~ 283 (371)
.....+.++.+|+.+ +.++.+..- .+.+++ +.+.+. |++.|- ....+..++.+.++++.+ +
T Consensus 167 ~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~ 236 (382)
T 2gdq_A 167 FKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLE--------EPLPFDQPQDYAMLRSRL--S 236 (382)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEE--------CCSCSSCHHHHHHHHTTC--S
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEE--------CCCCcccHHHHHHHHhhC--C
Confidence 122457788898887 578888742 466664 344455 655542 111234677788887766 7
Q ss_pred CcEEEecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 284 VPVFLDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 284 i~via~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
+||++++.+.+..++.++++.| +|.|++-
T Consensus 237 iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 237 VPVAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999999987 8998874
No 282
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=95.30 E-value=0.025 Score=51.17 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=49.1
Q ss_pred HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHcCCCEEEEchhHHHhh
Q 017434 241 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-TDVFKALALGASGVFVGRPVPFSL 319 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~-~dv~kal~lGAd~V~iGr~~l~~~ 319 (371)
-++.+.+.|+++++++.. ..+.+.++++..+.+.++ .++||+-. .+. +++..|||.+.+||+++.+
T Consensus 142 ~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a- 208 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA- 208 (228)
T ss_dssp HHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS-
T ss_pred HHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC-
Confidence 356778899999987531 234567777777544555 78888743 367 8889999999999997642
Q ss_pred hcCChHHHHHHHHHHHHHHH
Q 017434 320 AVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 320 ~~~G~~gv~~~l~~l~~el~ 339 (371)
..+ .+.++.++++++
T Consensus 209 --~dp---~~a~~~~~~~~~ 223 (228)
T 3m47_A 209 --DNP---AAAAAGAIESIK 223 (228)
T ss_dssp --SCH---HHHHHHHHHHC-
T ss_pred --CCH---HHHHHHHHHHHH
Confidence 122 244555555554
No 283
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.29 E-value=0.13 Score=49.29 Aligned_cols=95 Identities=17% Similarity=0.142 Sum_probs=62.4
Q ss_pred CCCceEEEEeecCCh----HHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCC
Q 017434 124 GPGIRFFQLYVTKHR----NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 199 (371)
Q Consensus 124 ~~~~~~~QLy~~~d~----~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (371)
..-|..+.+-...+. +...+++++++++|++.|.++-.+... ++. +
T Consensus 125 v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~---------g~~-g-------------------- 174 (350)
T 3b0p_A 125 VRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALL---------ALS-T-------------------- 174 (350)
T ss_dssp CSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC-----------------------------------
T ss_pred hCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhc---------ccC-c--------------------
Confidence 345666655332222 356788899999999999875321100 010 0
Q ss_pred cchhhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 200 DSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
.. . ...+...|+.++.+++.+ ++||+.-| +.+++++..+++ |+|+|.+.
T Consensus 175 ---~~---~-~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 175 ---KA---N-REIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp ------------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred ---cc---c-cCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 00 0 011345789999999998 89998876 579999999998 99999984
No 284
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.28 E-value=0.084 Score=49.53 Aligned_cols=92 Identities=21% Similarity=0.296 Sum_probs=57.4
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 27 v~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (297)
T 2rfg_A 27 VDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYY 106 (297)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 45677899999998655332111111 123455666666667899887555555555553 3347999999999998
Q ss_pred HhhhcCChHHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLRD 336 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~~ 336 (371)
+.. .++++.++++.+.+
T Consensus 107 ~~~---s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 107 NRP---SQEGLYQHFKMVHD 123 (297)
T ss_dssp TCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 753 45665555554433
No 285
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.26 E-value=0.099 Score=49.13 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=58.5
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPV 315 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~-~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~ 315 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+ ++|||+--|=.+-.++++ +-++|||+|++-.|+
T Consensus 34 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 113 (301)
T 3m5v_A 34 IKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPY 113 (301)
T ss_dssp HHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 35577899999998665442111111 123456666677777 899998666556666664 334899999999999
Q ss_pred HHhhhcCChHHHHHHHHHHH
Q 017434 316 PFSLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 316 l~~~~~~G~~gv~~~l~~l~ 335 (371)
++.. .++++.++++.+.
T Consensus 114 y~~~---s~~~l~~~f~~va 130 (301)
T 3m5v_A 114 YNKP---TQQGLYEHYKAIA 130 (301)
T ss_dssp SSCC---CHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHH
Confidence 8753 3455554544443
No 286
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=95.26 E-value=0.076 Score=52.08 Aligned_cols=129 Identities=12% Similarity=0.029 Sum_probs=89.2
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.||+++-+ ++.+..+. + . . . .+..
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~--------~--~----------------------~-~------~~~~ 162 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI--------I--D----------------------T-S------RAVD 162 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC--------B--C----------------------S-H------HHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc--------c--c----------------------c-c------hhHH
Confidence 356778888888888899999987 65432100 0 0 0 0 0112
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
.+.+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||
T Consensus 163 ~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPI 232 (405)
T 3rr1_A 163 AAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEE--------PVLAEQAETYARLAAHT--HLPI 232 (405)
T ss_dssp HHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEEC--------SSCCSSTHHHHHHHTTC--SSCE
T ss_pred HHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhcC--CCCE
Confidence 2467799999987 578888742 466664 4556778877741 11223567778887765 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++++.+.+..|+.++++.| +|.|++--
T Consensus 233 a~dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 233 AAGERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp EECTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred EecCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 9999999999999999987 89998854
No 287
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.25 E-value=0.52 Score=45.22 Aligned_cols=289 Identities=17% Similarity=0.151 Sum_probs=147.1
Q ss_pred CChHHHHHHHHhhC--------CcchhhhhcCCccchhhH-HHhHhccccceeecccc-------CCCCCCccceeecCc
Q 017434 8 TNVMEYEALAKEKL--------PKMVYDYYASGAEDQWTL-QENRNAFSRILFRPRIL-------RDVSKIDMTTTVLGF 71 (371)
Q Consensus 8 ~~~~d~~~~A~~~l--------~~~~~~y~~~g~~~~~t~-~~n~~~~~~~~l~pr~l-------~~~~~~d~s~~i~G~ 71 (371)
.+-+|+++...+-- .+..-..+-|-.||+..+ ....+++.-+.=+-|+. +....-++.+++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ig~~g~~~~~~~~~~~~~~~v~~~~~i~~~~k~~sr~~~~~~~~i~i~~~ 100 (350)
T 1vr6_A 21 STEEDIRKVVKLAESYNLKCHISKGQERTVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDV 100 (350)
T ss_dssp CCHHHHHHHHHHHHHTTEEEEEEECSSCEEEEEEEEESSCCHHHHHTSTTEEEEEECSCSCCTTBTTTCCSCCCEECSSC
T ss_pred CCHHHHHHHHHHHHhCCCeEEEEecCceEEEEEECCcCcCCHHHhhCCccceeeccCCCChhhhhhhcCCcCCEEEECCE
Confidence 34556666554321 222333445555666655 34455555544333333 233344555666544
Q ss_pred ccC--cceeecccccccccCChHhHHHHHHHHHcCCcEEe-cCCCCCCHHHHhccCCCceEEEEeecCChHHHHHHHHHH
Q 017434 72 NIS--MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRA 148 (371)
Q Consensus 72 ~~~--~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a 148 (371)
.+. .|++||=.+. .-+.+-=..++++++++|..++- ..+...+ .+..||- -..+....+.+.+
T Consensus 101 ~iG~~~~~vIAgpcs--~es~e~a~~~a~~~k~aGa~~vr~q~fKprT---------s~~~f~g---lg~egl~~l~~~~ 166 (350)
T 1vr6_A 101 KIGNGYFTIIAGPCS--VEGREMLMETAHFLSELGVKVLRGGAYKPRT---------SPYSFQG---LGEKGLEYLREAA 166 (350)
T ss_dssp EESTTEEEEEEECSB--CCCHHHHHHHHHHHHHTTCCEEECBSCCCCC---------STTSCCC---CTHHHHHHHHHHH
T ss_pred EECCCCeEEEEeCCC--cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCC---------ChHhhcC---CCHHHHHHHHHHH
Confidence 331 3666664332 22333345899999999988764 2222211 1222331 1345666666667
Q ss_pred HHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC-CCHHHHHHHHhhc
Q 017434 149 ERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS-LNWKDVKWLQTIT 227 (371)
Q Consensus 149 ~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ir~~~ 227 (371)
++.|...+. ++--|. .-+.-..+ .+- +. + .... .....++++. .+
T Consensus 167 ~e~Gl~~~t-e~~d~~----~~~~l~~~-vd~-lk-----------------------I---gAr~~~n~~LL~~va-~~ 212 (350)
T 1vr6_A 167 DKYGMYVVT-EALGED----DLPKVAEY-ADI-IQ-----------------------I---GARNAQNFRLLSKAG-SY 212 (350)
T ss_dssp HHHTCEEEE-ECSSGG----GHHHHHHH-CSE-EE-----------------------E---CGGGTTCHHHHHHHH-TT
T ss_pred HHcCCcEEE-EeCCHH----HHHHHHHh-CCE-EE-----------------------E---CcccccCHHHHHHHH-cc
Confidence 778877553 221111 01110001 000 00 0 0011 1345567776 46
Q ss_pred CCCEEEEEcc--CHHHHH----HHHHhCCCEEEEeCCCCcCCCC---ccchHHHHHHHHHHhcCCCcEEEec----CCCC
Q 017434 228 SLPILVKGVL--TAEDAS----LAIQYGAAGIIVSNHGARQLDY---VPATVMALEEVVQAAKGRVPVFLDG----GVRR 294 (371)
Q Consensus 228 ~~pv~vK~v~--~~e~a~----~a~~~Gad~I~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~i~via~G----GI~~ 294 (371)
+.||++|..+ +.++.. .+...|.+-+++--+|.+.... -...+..++.+++.. .+||+++. |-+.
T Consensus 213 ~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~--~lpVi~dssHs~G~~~ 290 (350)
T 1vr6_A 213 NKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKES--HLPILVDPSHSGGRRD 290 (350)
T ss_dssp CSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECHHHHHCSGG
T ss_pred CCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhh--CCCEEEeCCCCCcccc
Confidence 8999999753 666644 4456788777775466543321 122455677777765 58998854 3332
Q ss_pred --HHHHHHHHHcCCCEEEEchhHHHhhh-cCChHHH-HHHHHHHHHHHHHHHHHhC
Q 017434 295 --GTDVFKALALGASGVFVGRPVPFSLA-VDGEAGV-RKVLQMLRDEFELTMALSG 346 (371)
Q Consensus 295 --~~dv~kal~lGAd~V~iGr~~l~~~~-~~G~~gv-~~~l~~l~~el~~~m~~~G 346 (371)
..=...++++||++++|=+-+--.-+ +.|...+ -+-+..|.++++..-..+|
T Consensus 291 ~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~i~~alg 346 (350)
T 1vr6_A 291 LVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALG 346 (350)
T ss_dssp GHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHHHHHHhC
Confidence 23355678899999999986532211 1332110 0123455555555555555
No 288
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=95.23 E-value=0.083 Score=51.41 Aligned_cols=119 Identities=8% Similarity=-0.015 Sum_probs=84.7
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.+.+.++++.+.||+++-+.+..+ +....
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~~ 196 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA------------------------------------------------PIEED 196 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC------------------------------------------------CHHHH
Confidence 677777778888889999988765321 01124
Q ss_pred HHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 217 WKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|- -...+..++.+.++++.+ ++||++
T Consensus 197 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~iPIa~ 266 (392)
T 1tzz_A 197 RMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYE--------EVGDPLDYALQAALAEFY--PGPMAT 266 (392)
T ss_dssp HHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE--------CCSCTTCHHHHHHHTTTC--CSCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeec--------CCCChhhHHHHHHHHhhC--CCCEEE
Confidence 57788888877 578887642 456654 445566777663 111234677777777665 799999
Q ss_pred ecCCCCHHHHHHHHHcC-----CCEEEEch
Q 017434 289 DGGVRRGTDVFKALALG-----ASGVFVGR 313 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-----Ad~V~iGr 313 (371)
++.+.+..++.+++..| +|.|++--
T Consensus 267 dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 267 GENLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp CTTCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred CCCCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 99999999999999988 89998853
No 289
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=95.23 E-value=0.43 Score=45.71 Aligned_cols=226 Identities=16% Similarity=0.185 Sum_probs=117.1
Q ss_pred CcceeecccccccccCChHhHHHHHHHHHcCCc-----EE-ecCCCCCCHHHHhcc-C---CCceEEEEee--cCChHHH
Q 017434 74 SMPIMIAPTAFQKMAHPEGECATARAASAAGTI-----MT-LSSWATSSVEEVSST-G---PGIRFFQLYV--TKHRNVD 141 (371)
Q Consensus 74 ~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~-----~~-~s~~~~~~~eei~~~-~---~~~~~~QLy~--~~d~~~~ 141 (371)
..|++||=+|..--.+-+-=..+.++|+++|.. .+ +-+ ...+++... . ....++++|- .-..+..
T Consensus 4 ~~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt---~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~ 80 (350)
T 3g8r_A 4 SKPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQY---RNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQM 80 (350)
T ss_dssp -CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEE---CCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHH
T ss_pred CCCEEEEEECCCccCcHHHHHHHHHHHHHhCCcccCCeeEEccc---cchhhhcChhccCccHHHHHHHHHHhcCCHHHH
Confidence 469999999865322222234777899999875 22 222 223333211 0 1112233331 1356777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCC-ccccccccccccCCCCCCCcchhhhHhhhhcccC-CCHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS-LNWKD 219 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 219 (371)
..+.+.+++.|...+. | |. ..+.-|+-..++.|. ++. ..+ ..+..
T Consensus 81 ~~L~~~~~~~Gi~~~s-t---~f-D~~svd~l~~~~v~~~KI~----------------------------S~~~~N~pL 127 (350)
T 3g8r_A 81 QKLVAEMKANGFKAIC-T---PF-DEESVDLIEAHGIEIIKIA----------------------------SCSFTDWPL 127 (350)
T ss_dssp HHHHHHHHHTTCEEEE-E---EC-SHHHHHHHHHTTCCEEEEC----------------------------SSSTTCHHH
T ss_pred HHHHHHHHHcCCcEEe-c---cC-CHHHHHHHHHcCCCEEEEC----------------------------cccccCHHH
Confidence 8888899999987653 2 22 112222222222221 110 111 24566
Q ss_pred HHHHHhhcCCCEEEEEc-cCHHHHHH----HHHhCCCEEEEeCCCCcCCCCc--cchHHHHHHHHHHhcCCCcEEEec--
Q 017434 220 VKWLQTITSLPILVKGV-LTAEDASL----AIQYGAAGIIVSNHGARQLDYV--PATVMALEEVVQAAKGRVPVFLDG-- 290 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v-~~~e~a~~----a~~~Gad~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~i~via~G-- 290 (371)
|+++.+ ++.||++|.. .+.++... +.+.|.+.+.+ |+-+..... .-.+..++.+++..+ .+||-.++
T Consensus 128 L~~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLl--hC~s~YPt~~~~~nL~aI~~Lk~~fp-~lpVG~SdHt 203 (350)
T 3g8r_A 128 LERIAR-SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIM--HCVAEYPTPDDHLHLARIKTLRQQYA-GVRIGYSTHE 203 (350)
T ss_dssp HHHHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEE--ECCCCSSCCGGGCCTTHHHHHHHHCT-TSEEEEEECC
T ss_pred HHHHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEE--ecCCCCCCCcccCCHHHHHHHHHHCC-CCCEEcCCCC
Confidence 777765 6999999964 56666444 34567764444 222211111 124556777777663 48886663
Q ss_pred --CCCCHHHHHHHHHcCCCEEEEchhHHHhh--hcC-----ChHHHHHHHHHHHHHHHHHHHHhCC
Q 017434 291 --GVRRGTDVFKALALGASGVFVGRPVPFSL--AVD-----GEAGVRKVLQMLRDEFELTMALSGC 347 (371)
Q Consensus 291 --GI~~~~dv~kal~lGAd~V~iGr~~l~~~--~~~-----G~~gv~~~l~~l~~el~~~m~~~G~ 347 (371)
+. . .-.+.|+++||+ +|=+-+-..- ... .++. +..|.++++..-..+|.
T Consensus 204 ~g~~-~-~~~~AAvAlGA~--vIEkH~tldr~~g~D~~~Sl~P~e----f~~lv~~ir~i~~alG~ 261 (350)
T 3g8r_A 204 DPDL-M-EPIMLAVAQGAT--VFEKHVGLPTDQYGINNYSANPEQ----VRRWLAAAARALAMLGD 261 (350)
T ss_dssp CSSC-C-HHHHHHHHTTCC--EEEEEBCCCBTTBCCCTTCBCHHH----HHHHHHHHHHHHHHHCC
T ss_pred CCCc-c-HHHHHHHHcCCC--EEEEecCcccCCCCcccccCCHHH----HHHHHHHHHHHHHHcCC
Confidence 22 1 334578999997 4444332111 011 2343 45566666666677775
No 290
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=95.21 E-value=0.06 Score=49.82 Aligned_cols=42 Identities=26% Similarity=0.241 Sum_probs=36.3
Q ss_pred CHHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
..+.++++|+.+++|+.+.+ +.++++++.+.++|+|+++|.+
T Consensus 194 ~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 194 IENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp HHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 45779999999999999986 4679999999999999999953
No 291
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.20 E-value=2 Score=39.98 Aligned_cols=182 Identities=18% Similarity=0.160 Sum_probs=108.1
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 12 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 90 (297)
T 3flu_A 12 LVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVE 90 (297)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 45566776433334444445777777788986443 22 2345665532 22 22 46666654 356777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+. -| + .+-..+..
T Consensus 91 ai~la~~a~~~Gadavlv~--~P~y~-----------~~---~-----------------------------~~~l~~~f 125 (297)
T 3flu_A 91 AIALSQAAEKAGADYTLSV--VPYYN-----------KP---S-----------------------------QEGIYQHF 125 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7889999999999999874 33320 00 0 00023456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+.+.+.+++|+++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..+++..|+ +|
T Consensus 126 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdss----------gd~~~~~~~~~~~~~~f~v~-~G-- 192 (297)
T 3flu_A 126 KTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEAS----------GNIGSNIELINRAPEGFVVL-SG-- 192 (297)
T ss_dssp HHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHSCTTCEEE-EC--
T ss_pred HHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEEE-EC--
Confidence 7777778999998864 4677777766432 22333221 23455566666665556554 34
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+..-++.++.+|++++.-+..-+
T Consensus 193 -~d~~~l~~l~~G~~G~is~~an~ 215 (297)
T 3flu_A 193 -DDHTALPFMLCGGHGVITVAANA 215 (297)
T ss_dssp -CGGGHHHHHHTTCCEEEESGGGT
T ss_pred -cHHHHHHHHhCCCCEEEechHhh
Confidence 23457788999999999887543
No 292
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.17 E-value=0.054 Score=54.51 Aligned_cols=249 Identities=16% Similarity=0.171 Sum_probs=108.6
Q ss_pred ccccceeecccc-CCCCCCccceee-cCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHhc
Q 017434 45 AFSRILFRPRIL-RDVSKIDMTTTV-LGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS 122 (371)
Q Consensus 45 ~~~~~~l~pr~l-~~~~~~d~s~~i-~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~~ 122 (371)
.||++.|+|..- ...+++|++|.+ -+..+..|++.|||...+ +..+|.+..+.|...++.. ..+.++.++
T Consensus 11 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~tVT------e~~lA~ala~~GGiGvI~~--~~~~e~~a~ 82 (490)
T 4avf_A 11 TFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVT------EARLAIAMAQEGGIGIIHK--NMGIEQQAA 82 (490)
T ss_dssp CGGGEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTSEEEECC--SSCHHHHHH
T ss_pred CcceEEEeCCCCcccccceeeecccccCcccCCCccccchhhhC------HHHHHHHHHHcCCCccccC--CCCHHHHHH
Confidence 599999999754 234578999987 467889999999997654 6678888888887767742 455554322
Q ss_pred -------cCC----CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCc-chhHHhhhhc--CCCC--ccccc-
Q 017434 123 -------TGP----GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLG-RREADIKNRF--VLPP--HLTLK- 185 (371)
Q Consensus 123 -------~~~----~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g-~r~~d~~~~~--~~p~--~~~~~- 185 (371)
... .+.++ .....+.+.++...+.++..+.|.=+.-..| ...+|++... ..|- -++..
T Consensus 83 ~v~~vk~~~~~m~~~~v~v-----~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~ 157 (490)
T 4avf_A 83 EVRKVKKHETAIVRDPVTV-----TPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKD 157 (490)
T ss_dssp HHHHHHHCCC----------------------------------------------------------------------
T ss_pred HhhhhcccccCcccCceEe-----CCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCcHHHHhccCC
Confidence 111 12221 1222334555555556655543321100011 1112222100 0000 00000
Q ss_pred cccccccC-CCCCC----Ccchhh--hHhhhhc--ccCCCHHHHHHHHhh------cCCCEEEE--Ec---cCHHHHHHH
Q 017434 186 NYEGLYIG-KMDKT----DDSGLA--SYVANQI--DRSLNWKDVKWLQTI------TSLPILVK--GV---LTAEDASLA 245 (371)
Q Consensus 186 ~~~~~~~~-~~~~~----~~~~~~--~~~~~~~--~~~~~~~~i~~ir~~------~~~pv~vK--~v---~~~e~a~~a 245 (371)
++.-.... ...+. ...... ..+.... -.-.+.+++.+..+. ....+.+. .. .+.+.++.+
T Consensus 158 ~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l 237 (490)
T 4avf_A 158 KLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAAL 237 (490)
T ss_dssp -------------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHH
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHH
Confidence 00000000 00000 000000 0000000 000122222222110 01112221 11 224678999
Q ss_pred HHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 246 IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 246 ~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.++|+|.|.+....+ .....++.+.++++..+ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 238 ~~aG~d~I~id~a~g----~~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 238 VAAGVDVVVVDTAHG----HSKGVIERVRWVKQTFP-DVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHTTCSEEEEECSCC----SBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred hhcccceEEecccCC----cchhHHHHHHHHHHHCC-CceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 999999999864322 12345677888888764 588887 77999999999999999999985
No 293
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.16 E-value=2 Score=40.42 Aligned_cols=182 Identities=15% Similarity=0.149 Sum_probs=109.1
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ -|.++..- ..+.+.
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 45566776433334444445777777788986554 22 2344555532 22 22 46676654 356777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+. -| + ..-..+..
T Consensus 106 ai~la~~A~~~Gadavlv~--~P~y~-----------~~---~-----------------------------~~~l~~~f 140 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVV--TPYYN-----------RP---N-----------------------------QRGLYTHF 140 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7889999999999999874 33320 00 0 00023456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHH-h-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQ-Y-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~-~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
+.|.+.+++||++=.+ .+++...++.+ . .+-+|+-+. .++..+.++.+..+++..|+ +|.
T Consensus 141 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~l~~~~~~~f~v~-~G~ 209 (315)
T 3si9_A 141 SSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDAT----------GKIERASEQREKCGKDFVQL-SGD 209 (315)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHHCSSSEEE-ESC
T ss_pred HHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEEE-ecC
Confidence 7777778999998874 56787777776 3 334444332 12344555555555566664 342
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
..-++.++.+|++++.-+..-+
T Consensus 210 ---d~~~l~~l~~G~~G~is~~an~ 231 (315)
T 3si9_A 210 ---DCTALGFNAHGGVGCISVSSNV 231 (315)
T ss_dssp ---GGGHHHHHHTTCCEEEESGGGT
T ss_pred ---HHHHHHHHHcCCCEEEecHHHh
Confidence 3456788999999999887543
No 294
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.16 E-value=0.1 Score=50.00 Aligned_cols=90 Identities=19% Similarity=0.294 Sum_probs=56.7
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. --.+.+..+++.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677899999999765442111111 123456666666767899987656555566554 3347999999999988
Q ss_pred HhhhcCChHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l 334 (371)
+.. .++++.++++.+
T Consensus 138 ~~~---s~~~l~~~f~~V 152 (343)
T 2v9d_A 138 WKV---SEANLIRYFEQV 152 (343)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 643 345554444443
No 295
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.12 E-value=0.067 Score=47.19 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=57.3
Q ss_pred HHHHHHHHhhcCCCEEEEE--ccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 217 WKDVKWLQTITSLPILVKG--VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~--v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
.+.++.+++.++.|+++.. +.+.+.++.+.++|+|+|.+.. .....+ +..+.. ..+++.. +.+
T Consensus 46 ~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~----------~~~~~~-~~~~~~--g~~~~~g--~~t 110 (212)
T 2v82_A 46 EQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN----------IHSEVI-RRAVGY--GMTVCPG--CAT 110 (212)
T ss_dssp HHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS----------CCHHHH-HHHHHT--TCEEECE--ECS
T ss_pred HHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC----------CCHHHH-HHHHHc--CCCEEee--cCC
Confidence 4567888887888888743 4678889999999999996321 112233 233333 3555543 899
Q ss_pred HHHHHHHHHcCCCEEEE
Q 017434 295 GTDVFKALALGASGVFV 311 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~i 311 (371)
.+++.++..+|+|.|.+
T Consensus 111 ~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 111 ATEAFTALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999997
No 296
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.12 E-value=0.12 Score=48.94 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=54.9
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-. .-..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 38 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 117 (318)
T 3qfe_A 38 YAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAY 117 (318)
T ss_dssp HHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 3556789999999976543211111 1123456666667777899998555555666554 3347999999999977
Q ss_pred HhhhcCChHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l 334 (371)
|.-- ..++++.++++.+
T Consensus 118 ~~kp-~~~~~l~~~f~~i 134 (318)
T 3qfe_A 118 FGKA-TTPPVIKSFFDDV 134 (318)
T ss_dssp ---C-CCHHHHHHHHHHH
T ss_pred cCCC-CCHHHHHHHHHHH
Confidence 6310 1245554444443
No 297
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=95.09 E-value=0.081 Score=52.23 Aligned_cols=118 Identities=15% Similarity=0.157 Sum_probs=84.7
Q ss_pred CCh-HHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 136 KHR-NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 136 ~d~-~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
.++ +.+.+.++++.+.||+++-+.+.. +..
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-------------------------------------------------~~~ 213 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-------------------------------------------------AAR 213 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-------------------------------------------------CHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-------------------------------------------------CHH
Confidence 466 777778888888999998775431 011
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCC-Cc
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGR-VP 285 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~-i~ 285 (371)
...+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ + +|
T Consensus 214 ~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~~iP 283 (428)
T 3bjs_A 214 VDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLEE--------PFACNDFASYREVAKIT--PLVP 283 (428)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCEEC--------CSCTTCHHHHHHHTTTC--SSSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCccCHHHHHHHHHhC--CCCc
Confidence 2457788888886 578877642 456654 5567788887641 11233577777777665 6 99
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 286 VFLDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
|++++.+.+..++.++++.| +|.|++-
T Consensus 284 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 284 IAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp EEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred EEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 99999999999999999987 7888774
No 298
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=95.07 E-value=0.22 Score=47.97 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=85.5
Q ss_pred cCChHHHHHHHHHHHHc-CCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 135 TKHRNVDAQLVKRAERA-GFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~a-G~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
..+++.+.+.++++.+. |++++-+.++. ++
T Consensus 137 ~~~~~~~~~~a~~~~~~~G~~~~K~K~g~-------------------------------------------------~~ 167 (367)
T 3dg3_A 137 FDDPVKMVAEAERIRETYGINTFKVKVGR-------------------------------------------------RP 167 (367)
T ss_dssp SSCHHHHHHHHHHHHHHHCCCEEEEECCC-------------------------------------------------SS
T ss_pred CCCHHHHHHHHHHHHHhcCccEEEEeeCC-------------------------------------------------Ch
Confidence 35677777777777777 99998765431 01
Q ss_pred C-CCHHHHHHHHhhc--CCCEEEEEc--cCHHHHH----HHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCC
Q 017434 214 S-LNWKDVKWLQTIT--SLPILVKGV--LTAEDAS----LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV 284 (371)
Q Consensus 214 ~-~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~----~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i 284 (371)
. .+.+.++.+|+.+ +.++.+..- .+.+++. .+.+.|++.|- -...+..++.+.++++.. .+
T Consensus 168 ~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~i 237 (367)
T 3dg3_A 168 VQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFAE--------ELCPADDVLSRRRLVGQL--DM 237 (367)
T ss_dssp THHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEE--------SCSCTTSHHHHHHHHHHC--SS
T ss_pred hhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEE--------CCCCcccHHHHHHHHHhC--CC
Confidence 1 2356788888887 577877742 4666654 34455666663 111233577788888876 79
Q ss_pred cEEEecCCCCHHHHHHHHHcC-CCEEEEchhHH
Q 017434 285 PVFLDGGVRRGTDVFKALALG-ASGVFVGRPVP 316 (371)
Q Consensus 285 ~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l 316 (371)
||++++.+.+..|+.+++..| +|.|++--..+
T Consensus 238 PIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 270 (367)
T 3dg3_A 238 PFIADESVPTPADVTREVLGGSATAISIKTART 270 (367)
T ss_dssp CEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH
T ss_pred CEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh
Confidence 999999999999999999988 89999854443
No 299
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.06 E-value=1.2 Score=41.70 Aligned_cols=67 Identities=15% Similarity=0.065 Sum_probs=45.0
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD---GGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~---GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
++...++|||.|.+- ++.+.+.+.++.+.++ .+|+.++ +|-...-.+.+.-++|...|..+..++.+
T Consensus 176 a~ay~eAGAD~ifi~---------g~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 176 LRAARDAGADVGFLE---------GITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp HHHHHTTTCSEEEET---------TCCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred HHHHHHcCCCEEeec---------CCCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 566789999999882 2345677888888874 3787663 33221123444446799999999877754
No 300
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.06 E-value=0.096 Score=49.35 Aligned_cols=89 Identities=19% Similarity=0.308 Sum_probs=55.7
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. --.+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45677899999999665432111111 123456666666777899987655555566553 3347999999999987
Q ss_pred HhhhcCChHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQM 333 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~ 333 (371)
+.. .++++.++++.
T Consensus 119 ~~~---s~~~l~~~f~~ 132 (306)
T 1o5k_A 119 NKP---TQEGLYQHYKY 132 (306)
T ss_dssp SCC---CHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHH
Confidence 642 34555444443
No 301
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.04 E-value=2.2 Score=39.71 Aligned_cols=182 Identities=10% Similarity=0.035 Sum_probs=107.6
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe-----cCCCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-----SSWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~-----s~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ +++.+.+.+|-. +. .+ -|.+...-. .+.+.
T Consensus 9 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ 87 (300)
T 3eb2_A 9 FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS-TSVAD 87 (300)
T ss_dssp EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE-SSHHH
T ss_pred EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHH
Confidence 35566776433334444445677777778875443 233455666532 22 22 467777654 56777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+.. |.+- -| + ..-..+..
T Consensus 88 ai~la~~a~~~Gadavlv~~--P~y~-----------~~---~-----------------------------~~~l~~~f 122 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAIL--EAYF-----------PL---K-----------------------------DAQIESYF 122 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEEE--CCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 78899999999999998742 3220 00 0 00123456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+.|.+.+++|+++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..++++.|+. |.
T Consensus 123 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~~-G~- 190 (300)
T 3eb2_A 123 RAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDAS----------TNTGRLLSIINRCGDALQVFS-AS- 190 (300)
T ss_dssp HHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTTEEEEEECS----------SBHHHHHHHHHHHGGGSEEEE-CT-
T ss_pred HHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHHcCCCeEEEe-Cc-
Confidence 7777788999998875 4577777775432 22333221 134445555555554565554 32
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
. ..++.++.+|++++.-+..-+
T Consensus 191 d--~~~~~~l~~G~~G~is~~an~ 212 (300)
T 3eb2_A 191 A--HIPAAVMLIGGVGWMAGPACI 212 (300)
T ss_dssp T--SCHHHHHHTTCCEEEEGGGGT
T ss_pred H--HHHHHHHhCCCCEEEeChhhh
Confidence 1 236788999999999887543
No 302
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.00 E-value=0.041 Score=51.78 Aligned_cols=110 Identities=18% Similarity=0.102 Sum_probs=67.3
Q ss_pred CCceEEEEeecCChHHHHHHHHHHHHcC-CcEEEEecCCCCCcchhHHhhhh-cCCCCccccccccccccCCCCCCCcch
Q 017434 125 PGIRFFQLYVTKHRNVDAQLVKRAERAG-FKAIALTVDTPRLGRREADIKNR-FVLPPHLTLKNYEGLYIGKMDKTDDSG 202 (371)
Q Consensus 125 ~~~~~~QLy~~~d~~~~~~~~~~a~~aG-~~al~vtvd~p~~g~r~~d~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~ 202 (371)
+-|.++.+.+..+.+...++++.++++| +++|.++- ....+.. -+.+.. ..++.. ....++ ++
T Consensus 160 ~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~-~~~~~~~-i~~~~~~~~~~~~---~~~gG~----------sg 224 (314)
T 2e6f_A 160 GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVN-SVGNGLV-IDAESESVVIKPK---QGFGGL----------GG 224 (314)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECC-CEEEEEC-EETTTTEESCCGG---GGEEEE----------ES
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeC-CCCcccc-ccCCCCCcccccC---cCCCcc----------Cc
Confidence 4578888887667778888899999999 99987642 1100000 000000 000000 000000 00
Q ss_pred hhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 203 LASYVANQIDRSLNWKDVKWLQTIT-SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 203 ~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
.. ..+..++.++++++.+ ++||+.-+ +.+++++..++.+|||+|.+.
T Consensus 225 --~~-----~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 225 --KY-----ILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp --GG-----GHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred --cc-----ccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 00 0123578899999998 89988765 578999999999999999984
No 303
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.99 E-value=0.066 Score=53.94 Aligned_cols=247 Identities=13% Similarity=0.129 Sum_probs=132.4
Q ss_pred ccccceeecccc-CCCCCCccceee-cCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHh-
Q 017434 45 AFSRILFRPRIL-RDVSKIDMTTTV-LGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS- 121 (371)
Q Consensus 45 ~~~~~~l~pr~l-~~~~~~d~s~~i-~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~- 121 (371)
.||++.|+|..- ...+++|++|.+ -+..+..|++.|||...+ |..+|.+.++.|...++.. +.+.++.+
T Consensus 12 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVT------e~~ma~a~a~~GGiGvI~~--n~s~e~qa~ 83 (496)
T 4fxs_A 12 TFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQAA 83 (496)
T ss_dssp CGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHH
T ss_pred CcccEEEecCccccccccccccceeccccccCCCceecCcchhh------HHHHHHHHHHcCCcceecC--CCCHHHHHH
Confidence 599999999754 234578999987 467889999999997654 6678888888887766742 45554322
Q ss_pred ------ccCC----CceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCC--CCCcchhHHhhhhcCCCCccccccccc
Q 017434 122 ------STGP----GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT--PRLGRREADIKNRFVLPPHLTLKNYEG 189 (371)
Q Consensus 122 ------~~~~----~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~--p~~g~r~~d~~~~~~~p~~~~~~~~~~ 189 (371)
.... .+.++ .....+.+.++...+.++..+-|.=+. .+.-...+|++... ........+..
T Consensus 84 ~V~~Vk~~~~~m~~d~v~v-----~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~--~~~~~v~diM~ 156 (496)
T 4fxs_A 84 QVHQVKIFEAGVVTHPVTV-----RPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVT--DLTKSVAAVMT 156 (496)
T ss_dssp HHHHHHHCCC--CBCCCCB-----CSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCC--CTTSBGGGTSE
T ss_pred HHHhccccccccccCceEE-----CCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcc--cCCCcHHHHhc
Confidence 1111 22222 122334566777777888877664211 11012234443111 00000000000
Q ss_pred -cc-cCCCCC-CCcchhhhHhhh-------hcc------cCCCHHHHHHHHhh------cCCCEEEEEc-----cCHHHH
Q 017434 190 -LY-IGKMDK-TDDSGLASYVAN-------QID------RSLNWKDVKWLQTI------TSLPILVKGV-----LTAEDA 242 (371)
Q Consensus 190 -~~-~~~~~~-~~~~~~~~~~~~-------~~~------~~~~~~~i~~ir~~------~~~pv~vK~v-----~~~e~a 242 (371)
.+ .....+ .....+.+.+.. ..| .-.+.+++.+..+. .+..+.+... .+.+.+
T Consensus 157 p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a 236 (496)
T 4fxs_A 157 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERV 236 (496)
T ss_dssp EGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHH
T ss_pred CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHH
Confidence 00 000000 000000000000 000 00122222222111 1122222221 246789
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
+.+.++|+|.|.+....+ .....++.+.++++..+ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 237 ~~l~~aG~d~I~id~a~g----~~~~~~~~i~~ir~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 237 KALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHhccCceEEeccccc----cchHHHHHHHHHHHHCC-CceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 999999999999964322 12345678888888774 688888 77999999999999999999986
No 304
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=94.99 E-value=0.22 Score=44.60 Aligned_cols=126 Identities=11% Similarity=-0.000 Sum_probs=80.1
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEec-CCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhccc
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTV-DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDR 213 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtv-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (371)
..|...+.+.++.+.+.|++.+-+.+ |.+. .| ..
T Consensus 15 a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~f-------------v~--------------------------------~~ 49 (228)
T 1h1y_A 15 SSDFANLAAEADRMVRLGADWLHMDIMDGHF-------------VP--------------------------------NL 49 (228)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSS-------------SS--------------------------------CB
T ss_pred eCCHHHHHHHHHHHHHcCCCEEEEEEecCCc-------------Cc--------------------------------ch
Confidence 45677778888999999999875532 1110 01 01
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEc-cCH-HHHHHHHHhCCCEEEEeCCCCcCCCCccch-HHHHHHHHHHhcCCCcEEEec
Q 017434 214 SLNWKDVKWLQTITSLPILVKGV-LTA-EDASLAIQYGAAGIIVSNHGARQLDYVPAT-VMALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v-~~~-e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~i~via~G 290 (371)
.+..+.++.+|+.++.|+.+-.. .++ +.++.+.++|+|+|+++ ++. .... ...+..+++. .+.++.+=
T Consensus 50 ~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH--~~~----~~~~~~~~~~~i~~~---g~~igv~~ 120 (228)
T 1h1y_A 50 TIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFH--IEV----SRDNWQELIQSIKAK---GMRPGVSL 120 (228)
T ss_dssp CBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEE--GGG----CTTTHHHHHHHHHHT---TCEEEEEE
T ss_pred hhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEEC--CCC----cccHHHHHHHHHHHc---CCCEEEEE
Confidence 23457789999888777775543 333 34888889999999994 331 1123 3445555432 45566555
Q ss_pred CCCCHHHHHHHHHc---CCCEEEEchh
Q 017434 291 GVRRGTDVFKALAL---GASGVFVGRP 314 (371)
Q Consensus 291 GI~~~~dv~kal~l---GAd~V~iGr~ 314 (371)
.-.+..+.++.+.. ++|.|.+++.
T Consensus 121 ~p~t~~e~~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 121 RPGTPVEEVFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp CTTSCGGGGHHHHHSSSCCSEEEEESS
T ss_pred eCCCCHHHHHHHHhcCCCCCEEEEEee
Confidence 55666666666665 9999999764
No 305
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.98 E-value=0.34 Score=47.05 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=61.3
Q ss_pred HHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 217 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
++.+...++..+++++ =.+++.+.+..+.+.|+|.+.|... -...+..|..+.+ ...|||.+-|..|-+
T Consensus 103 ~~~L~~~~~~~Gi~~~-stpfD~~svd~l~~~~vd~~KIgS~-------~~~N~pLL~~va~---~gKPViLStGmaTl~ 171 (385)
T 1vli_A 103 ILPLLDYCREKQVIFL-STVCDEGSADLLQSTSPSAFKIASY-------EINHLPLLKYVAR---LNRPMIFSTAGAEIS 171 (385)
T ss_dssp HHHHHHHHHHTTCEEE-CBCCSHHHHHHHHTTCCSCEEECGG-------GTTCHHHHHHHHT---TCSCEEEECTTCCHH
T ss_pred HHHHHHHHHHcCCcEE-EccCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHh---cCCeEEEECCCCCHH
Confidence 4567777777788876 3457788899999999999999532 1234566666654 268999999999999
Q ss_pred HHHHHHH----cCCCEEEE
Q 017434 297 DVFKALA----LGASGVFV 311 (371)
Q Consensus 297 dv~kal~----lGAd~V~i 311 (371)
++..|+. .|..-|.+
T Consensus 172 Ei~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 172 DVHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp HHHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHHHHCCCCcEEE
Confidence 9987775 47644444
No 306
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=94.97 E-value=0.054 Score=51.04 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=46.5
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH----------HHHHHHHcCCCEE
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT----------DVFKALALGASGV 309 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~----------dv~kal~lGAd~V 309 (371)
+-|+.+.++|+|+++.|.+ -+..+++.++ .-.++.++||+-.. .+.+++.+|||.+
T Consensus 162 ~lA~~a~~~G~dGvV~s~~-------------E~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~i 227 (303)
T 3ru6_A 162 NFSKISYENGLDGMVCSVF-------------ESKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYI 227 (303)
T ss_dssp HHHHHHHHTTCSEEECCTT-------------THHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECHH-------------HHHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEE
Confidence 3467788999999887432 1456666664 34588899998331 4667788999999
Q ss_pred EEchhHHH
Q 017434 310 FVGRPVPF 317 (371)
Q Consensus 310 ~iGr~~l~ 317 (371)
.+||++..
T Consensus 228 VvGr~I~~ 235 (303)
T 3ru6_A 228 VVGRPIYK 235 (303)
T ss_dssp EECHHHHT
T ss_pred EEChHHhC
Confidence 99999874
No 307
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.94 E-value=0.063 Score=54.22 Aligned_cols=248 Identities=15% Similarity=0.163 Sum_probs=113.1
Q ss_pred hccccceeecccc-CCCCCCccceee-cCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHHh
Q 017434 44 NAFSRILFRPRIL-RDVSKIDMTTTV-LGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS 121 (371)
Q Consensus 44 ~~~~~~~l~pr~l-~~~~~~d~s~~i-~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei~ 121 (371)
.-||++.|+|..- ...+++|++|.+ -+.+++.||+-|||--.+ |..||.+.++.|...++. .+.++|+.+
T Consensus 60 LTfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTVT------e~~MAIamAr~GGiGvIH--~n~sie~Qa 131 (556)
T 4af0_A 60 LTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVT------EDRMAIALALHGGLGIIH--HNCSAEEQA 131 (556)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTTC------SHHHHHHHHHTTCEEEEC--CSSCHHHHH
T ss_pred CChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCccccc------CHHHHHHHHHCCCeEEEc--CCCCHHHHH
Confidence 4799999999753 344689999998 578999999999996554 779999999999998984 456777644
Q ss_pred cc------CCCceEEE--EeecCChHHHHHHHHHHHHcCCcEEEEecCCCC----Cc-chhHHhhhhc-CCCC--ccccc
Q 017434 122 ST------GPGIRFFQ--LYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR----LG-RREADIKNRF-VLPP--HLTLK 185 (371)
Q Consensus 122 ~~------~~~~~~~Q--Ly~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~----~g-~r~~d~~~~~-~~p~--~~~~~ 185 (371)
+. ... .|+. +.. .....+.+.++..++.++..+-|+-|... .| ...+|++..- ..|- -++.
T Consensus 132 ~~V~~VKr~e~-g~i~dPvtl-~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~- 208 (556)
T 4af0_A 132 AMVRRVKKYEN-GFITDPLCL-GPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTT- 208 (556)
T ss_dssp HHHHHHHHCCC---------------------------------------------------------------------
T ss_pred HHHHHHHhccc-CccCCCeEc-CCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhccc-
Confidence 21 111 1111 111 12233445555556667766665433110 01 1112222100 0000 0000
Q ss_pred cccccccCCCCCC-CcchhhhHhhh-------hcc--cC----CCHHHHHHHHhh---c------CCCEEEEEccC---H
Q 017434 186 NYEGLYIGKMDKT-DDSGLASYVAN-------QID--RS----LNWKDVKWLQTI---T------SLPILVKGVLT---A 239 (371)
Q Consensus 186 ~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~--~~----~~~~~i~~ir~~---~------~~pv~vK~v~~---~ 239 (371)
.+ ....+. ....+.+.+.. ..| .. .+.+++...++. . .+.+..-...+ .
T Consensus 209 ~l-----vt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~ 283 (556)
T 4af0_A 209 EV-----VTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDK 283 (556)
T ss_dssp ------------------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHH
T ss_pred ce-----EEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHH
Confidence 00 000000 00000000000 000 00 111222222110 0 01111111122 2
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
+-+..+.++|+|.|++...-|+ ....++.+..+++..+ +++||+ |.|-|.+-+...+..|||+|-+|-
T Consensus 284 eR~~aLv~AGvD~iviD~ahGh----s~~v~~~i~~ik~~~p-~~~via-GNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 284 DRLKLLAEAGLDVVVLDSSQGN----SVYQIEFIKWIKQTYP-KIDVIA-GNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHTTCCEEEECCSCCC----SHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHhcCCcEEEEeccccc----cHHHHHHHHHHHhhCC-cceEEe-ccccCHHHHHHHHHcCCCEEeecC
Confidence 4477889999999999753222 2345778888888764 688776 889999999999999999998774
No 308
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=94.94 E-value=0.12 Score=50.54 Aligned_cols=132 Identities=16% Similarity=0.118 Sum_probs=90.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.++.+..+. .+. .+ ...+...
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~------~g~-~~-----------------------------~~~~~~~ 193 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIY------DGH-QP-----------------------------SLEDLER 193 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTT------CSB-CC-----------------------------CHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCccc------ccc-cc-----------------------------cHHHHHH
Confidence 36677777777888889999988765432110 000 00 0001223
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ .+||+
T Consensus 194 d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa 263 (404)
T 4e5t_A 194 SEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLEAYDPLWFEE--------PIPPEKPEDMAEVARYT--SIPVA 263 (404)
T ss_dssp HHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCcEEEC--------CCCcccHHHHHHHHhhC--CCCEE
Confidence 467799999987 578888742 466664 4566778887741 12233677888888887 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++.+.+..|+.+++..| +|.|++--
T Consensus 264 ~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 264 TGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp ECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 999999999999999988 78888754
No 309
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.91 E-value=0.051 Score=53.26 Aligned_cols=67 Identities=22% Similarity=0.340 Sum_probs=51.2
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.+.++.++++|+|.|++..+.|. .....+.+.++++.+ .+||++ |++.+.+++.++..+|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 67899999999999988433221 112356666666655 588887 78999999999999999999996
No 310
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=94.91 E-value=0.2 Score=48.30 Aligned_cols=120 Identities=16% Similarity=0.228 Sum_probs=84.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.|++++-+.++. ++..
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~-------------------------------------------------~~~~ 169 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGG-------------------------------------------------SKEL 169 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecC-------------------------------------------------CHHH
Confidence 577777777778788999998765431 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEE--ccCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKG--VLTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~--v~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+.. ..+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||+
T Consensus 170 d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa 239 (368)
T 3q45_A 170 DVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHCEE--------PVSRNLYTALPKIRQAC--RIPIM 239 (368)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEEC--------CBCGGGGGGHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEEEC--------CCChhHHHHHHHHHhhC--CCCEE
Confidence 456788899887 57787774 2456654 4455677777741 11223456677777765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++..+.+..|+.+++..| +|.|++--.
T Consensus 240 ~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 267 (368)
T 3q45_A 240 ADESCCNSFDAERLIQIQACDSFNLKLS 267 (368)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEECTT
T ss_pred EcCCcCCHHHHHHHHHcCCCCeEEechh
Confidence 999999999999999987 899988643
No 311
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.90 E-value=0.075 Score=50.33 Aligned_cols=91 Identities=16% Similarity=0.196 Sum_probs=59.5
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l~ 317 (371)
+.+++.|+|+|.+.+..|-...-.. --.+.+..+.+.+.+++|||+.-|- +-.++++ +-++|||+|++-.|+++
T Consensus 40 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y~ 118 (316)
T 3e96_A 40 DRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIHP 118 (316)
T ss_dssp HHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCCS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 4567899999998654332111111 1234566666777778999987674 7777664 34479999999999875
Q ss_pred hhhcCChHHHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLRDE 337 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~~e 337 (371)
.. .++++.++++.+.+.
T Consensus 119 ~~---s~~~l~~~f~~va~a 135 (316)
T 3e96_A 119 YV---TAGGVYAYFRDIIEA 135 (316)
T ss_dssp CC---CHHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHHh
Confidence 32 467766666665554
No 312
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.88 E-value=0.085 Score=49.92 Aligned_cols=90 Identities=18% Similarity=0.231 Sum_probs=56.4
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l~ 317 (371)
+.+++.|+|+|.+.++.|-...-.. --.+.+..+.+.+.+++|||+--|= +-.++++ +-++|||+|++-.|+++
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y~ 118 (314)
T 3d0c_A 40 EFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVHP 118 (314)
T ss_dssp HHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCCS
T ss_pred HHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 4567899999988654332111111 1234566666667678999864444 5555553 33479999999999987
Q ss_pred hhhcCChHHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLRD 336 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~~ 336 (371)
.. .++++.++++.+.+
T Consensus 119 ~~---s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 119 YI---TDAGAVEYYRNIIE 134 (314)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 53 45666656555544
No 313
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=94.88 E-value=0.98 Score=42.12 Aligned_cols=71 Identities=18% Similarity=0.135 Sum_probs=48.9
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchhHHHh
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG-ASGVFVGRPVPFS 318 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~l~~ 318 (371)
+.++...++|||.|.+-. +.++.+.+.++.+.++.++|++++-.-...-++.+.-++| ...|..|...+.+
T Consensus 170 ~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~ra 241 (290)
T 2hjp_A 170 RRGQAYEEAGADAILIHS--------RQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRA 241 (290)
T ss_dssp HHHHHHHHTTCSEEEECC--------CCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHH
T ss_pred HHHHHHHHcCCcEEEeCC--------CCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHH
Confidence 346788999999999822 1455577788888885459999752100112344555689 9999999987764
No 314
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=94.88 E-value=0.18 Score=49.01 Aligned_cols=136 Identities=15% Similarity=0.152 Sum_probs=89.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.+.+...+.. . +++. + .++. ..+...
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~---~-~~~~-~-------------------gg~~-------~~~~~~ 184 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSA---L-QHVT-R-------------------RSMS-------AEAIEL 184 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTE---E-ECCB-T-------------------TBCC-------HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccccccc---c-cccc-c-------------------CCcc-------hhhHHH
Confidence 467777778888889999999987654321100 0 0000 0 0000 011223
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||+
T Consensus 185 ~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~ipIa 254 (392)
T 2poz_A 185 AYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRKIGELDICFVEE--------PCDPFDNGALKVISEQI--PLPIA 254 (392)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEE
Confidence 567899999987 578888753 466664 4455667665531 12234678888888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
+++.+.+..++.+++..| +|.|++-
T Consensus 255 ~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 255 VGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp ECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 8999873
No 315
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.86 E-value=0.095 Score=49.02 Aligned_cols=90 Identities=20% Similarity=0.333 Sum_probs=55.5
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (292)
T 2vc6_A 27 VEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYY 106 (292)
T ss_dssp HHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45677899999998654332111111 123455666666667899886555445555553 3447999999999987
Q ss_pred HhhhcCChHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l 334 (371)
+.. .++++.++++.+
T Consensus 107 ~~~---s~~~l~~~f~~i 121 (292)
T 2vc6_A 107 NKP---TQEGIYQHFKAI 121 (292)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 455555444443
No 316
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=94.85 E-value=0.25 Score=47.49 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=80.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.++ +..
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~---------------------------------------------------~~~ 168 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIE---------------------------------------------------PGW 168 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECB---------------------------------------------------TTB
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecC---------------------------------------------------chh
Confidence 36777777888888899999876541 122
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHH---HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAED---ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~---a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
..+.++.+|+.+ +.++.+..- .+.++ ++.+.+.|++.|- -...+..++.+.++++.. ++||++
T Consensus 169 ~~e~v~avr~~~g~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE--------~P~~~~~~~~~~~l~~~~--~ipIa~ 238 (368)
T 1sjd_A 169 DVEPVRAVRERFGDDVLLQVDANTAYTLGDAPQLARLDPFGLLLIE--------QPLEEEDVLGHAELARRI--QTPICL 238 (368)
T ss_dssp SHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHTTGGGCCSEEE--------CCSCTTCHHHHHHHHTTC--SSCEEE
T ss_pred HHHHHHHHHHhcCCCceEEEeccCCCCHHHHHHHHHHHhcCCCeEe--------CCCChhhHHHHHHHHHhC--CCCEEE
Confidence 456778888776 466665531 23333 3334566777663 111233577777787765 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
++.+.+..++.+++..| +|.|++=
T Consensus 239 dE~~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 239 DESIVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEec
Confidence 99999999999999988 8999983
No 317
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=94.85 E-value=0.15 Score=49.80 Aligned_cols=88 Identities=10% Similarity=0.012 Sum_probs=65.9
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ ++++.+..- .+++++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||
T Consensus 203 ~~~e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPI 272 (410)
T 2gl5_A 203 MGEARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEE--------PIHPLNSDNMQKVSRST--TIPI 272 (410)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------SSCSSCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCE
Confidence 3567899999987 578888753 466664 4455667665531 11234678888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
++++.+.+..++.+++..| +|.|++-
T Consensus 273 a~dE~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 273 ATGERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp EECTTCCTTHHHHHHHHTTCCSEECCC
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999987 7999874
No 318
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=94.84 E-value=2.4 Score=39.18 Aligned_cols=87 Identities=18% Similarity=0.272 Sum_probs=58.5
Q ss_pred HHHHHHHhhc---CCCEEEEEccC-------------HH----HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHH
Q 017434 218 KDVKWLQTIT---SLPILVKGVLT-------------AE----DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVV 277 (371)
Q Consensus 218 ~~i~~ir~~~---~~pv~vK~v~~-------------~e----~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~ 277 (371)
+.|+.+++.. +.|+.+-.... .+ .++...++|||.|.+ .+.++.+.+.++.
T Consensus 130 ~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~---------e~~~~~~~~~~i~ 200 (275)
T 2ze3_A 130 RRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFV---------PLALQSQDIRALA 200 (275)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEEC---------TTCCCHHHHHHHH
T ss_pred HHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEE---------CCCCCHHHHHHHH
Confidence 4456555542 67876665421 12 356788999999987 2346678888898
Q ss_pred HHhcCCCcEEEec--CCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 278 QAAKGRVPVFLDG--GVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 278 ~~~~~~i~via~G--GI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
+.+ ++|+.... +..+ +.+.-++|...|..|...+.+
T Consensus 201 ~~~--~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 201 DAL--RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp HHC--SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHHHHH
T ss_pred Hhc--CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHHHHH
Confidence 888 57775553 3334 345556899999999877654
No 319
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=94.80 E-value=0.35 Score=46.20 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=66.0
Q ss_pred ccCCCceEEEEeec------CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCC
Q 017434 122 STGPGIRFFQLYVT------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKM 195 (371)
Q Consensus 122 ~~~~~~~~~QLy~~------~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 195 (371)
+..+-|.++.|-+. .+.+...++++.++++|++.|.++-.... +... .
T Consensus 206 ~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~--------------~~~~--~---------- 259 (340)
T 3gr7_A 206 EVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIV--------------PARM--N---------- 259 (340)
T ss_dssp HHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSS--------------CCCC--C----------
T ss_pred HhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcc--------------CCCC--C----------
Confidence 33445778887652 24566778999999999999887532100 0000 0
Q ss_pred CCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-cCHHHHHHHHHhC-CCEEEEe
Q 017434 196 DKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-~~~e~a~~a~~~G-ad~I~vs 256 (371)
..+.+.++.++++++.+++||+.-+. .++++++.+++.| +|.|.+.
T Consensus 260 ---------------~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 260 ---------------VYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp ---------------CCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred ---------------CCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 01234678899999999999998764 6899999999999 9999883
No 320
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.79 E-value=0.095 Score=48.26 Aligned_cols=79 Identities=24% Similarity=0.444 Sum_probs=53.0
Q ss_pred HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH----H------HHHHHHcCCCEEE
Q 017434 241 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT----D------VFKALALGASGVF 310 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~----d------v~kal~lGAd~V~ 310 (371)
-|+.+.++|+|+++.|. ..+..+++.++ +-.++.+.||+-.. | +.+++.+|||.+.
T Consensus 149 ~A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~-~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iV 214 (259)
T 3tfx_A 149 LAKMAKHSGADGVICSP-------------LEVKKLHENIG-DDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIV 214 (259)
T ss_dssp HHHHHHHTTCCEEECCG-------------GGHHHHHHHHC-SSSEEEECCCCCC-----------CHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCEEEECH-------------HHHHHHHhhcC-CccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEE
Confidence 36677889999998742 22455556654 33477889998643 2 7788899999999
Q ss_pred EchhHHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 311 VGRPVPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 311 iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
+||++..+ ..+ .+.++.++++++
T Consensus 215 vGr~I~~a---~dp---~~a~~~i~~~~~ 237 (259)
T 3tfx_A 215 VGRPITLA---SDP---KAAYEAIKKEFN 237 (259)
T ss_dssp ECHHHHTS---SSH---HHHHHHHHHHHT
T ss_pred EChHHhCC---CCH---HHHHHHHHHHHH
Confidence 99998743 122 245566666554
No 321
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=94.75 E-value=0.17 Score=49.34 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=89.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCC-CCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDT-PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~-p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
+.+.+.+.++++.+.||+++-+.+-. ...|.. |.-|. .... ...+...
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~-----------------~~~~-------~~~~~~~ 200 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW-------NQQNL-----------------NGPL-------TDKILRL 200 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB-------SCSCC-----------------CSSC-------CHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcc-------ccCcc-----------------cCCC-------chhHHHH
Confidence 67777788888889999999875410 000110 00010 0000 0011223
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||+
T Consensus 201 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa 270 (407)
T 2o56_A 201 GYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEE--------PVMPLNPAQMKQVADKV--NIPLA 270 (407)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------SSCSSSHHHHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEE
Confidence 567899999987 578888752 456654 4556778877641 12234678888888887 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
+++.+.+..++.+++..| +|.|++-
T Consensus 271 ~dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 271 AGERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999988 8999874
No 322
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=94.75 E-value=0.17 Score=49.95 Aligned_cols=119 Identities=17% Similarity=0.169 Sum_probs=84.6
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+.+.+.+.++++.+.||+++-+.+.. +....
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~-------------------------------------------------~~~~d 228 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGA-------------------------------------------------NVQDD 228 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS-------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCC-------------------------------------------------CHHHH
Confidence 67777788888889999999876531 01123
Q ss_pred HHHHHHHHhhc--CCCEEEEE--ccCHHHHHH----HHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 217 WKDVKWLQTIT--SLPILVKG--VLTAEDASL----AIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~--v~~~e~a~~----a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.+.++.+|+.+ +.++.+.. ..+.+++.. +.+.|++.|-- ...+..++.+.++++.+. .+||++
T Consensus 229 ~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~-~iPIa~ 299 (441)
T 2hxt_A 229 IRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEE--------PTSPDDVLGHAAIRQGIT-PVPVST 299 (441)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCEEC--------CSCTTCHHHHHHHHHHHT-TSCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeC--------CCCHHHHHHHHHHHhhCC-CCCEEE
Confidence 56788888877 47777764 246666443 44567776531 112335777888887763 499999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++.+.+..++.+++..| +|.|++--
T Consensus 300 dE~~~~~~~~~~~i~~~~~d~v~ik~ 325 (441)
T 2hxt_A 300 GEHTQNRVVFKQLLQAGAVDLIQIDA 325 (441)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEECCCT
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999988 89998853
No 323
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.74 E-value=0.27 Score=46.80 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=65.5
Q ss_pred ccCCCceEEEEee------cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCC
Q 017434 122 STGPGIRFFQLYV------TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKM 195 (371)
Q Consensus 122 ~~~~~~~~~QLy~------~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 195 (371)
+..+-+.++.|.+ ..+.+...+++++++++|++.|.++-..... . ..|
T Consensus 206 ~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~--------~--~~~---------------- 259 (338)
T 1z41_A 206 QVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH--------A--DIN---------------- 259 (338)
T ss_dssp HHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC--------C--CCC----------------
T ss_pred HHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc--------C--CCC----------------
Confidence 3334567777755 2345667788999999999999875421100 0 000
Q ss_pred CCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-cCHHHHHHHHHhC-CCEEEEe
Q 017434 196 DKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-~~~e~a~~a~~~G-ad~I~vs 256 (371)
..+...++.++++++.+++||+.-+. .++++++.+++.| +|.|.+.
T Consensus 260 ---------------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 260 ---------------VFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ---------------CCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred ---------------CCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 01224578889999999999997764 5899999999999 9999883
No 324
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.71 E-value=2.8 Score=39.31 Aligned_cols=182 Identities=17% Similarity=0.162 Sum_probs=107.9
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 45566776433333444445677777788876443 2 23445665532 12 22 45666654 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+. -| + ..-..+..
T Consensus 107 ai~la~~A~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f 141 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLV--TPYYN-----------KP---T-----------------------------QEGMYQHF 141 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7889999999999999874 33320 00 0 00123456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+.|.+.+++||++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..+++..|+ +|.
T Consensus 142 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~-~G~- 209 (314)
T 3qze_A 142 RHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKEAT----------GDLQRAKEVIERVGKDFLVY-SGD- 209 (314)
T ss_dssp HHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHHHSCTTSEEE-ESC-
T ss_pred HHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEEcCC----------CCHHHHHHHHHHcCCCeEEE-ecC-
Confidence 7777788999998864 4677777776532 22333221 13455566666665556554 342
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 210 --d~~~l~~l~~Ga~G~is~~an~ 231 (314)
T 3qze_A 210 --DATAVELMLLGGKGNISVTANV 231 (314)
T ss_dssp --GGGHHHHHHTTCCEEEESGGGT
T ss_pred --hHHHHHHHHCCCCEEEecHHhh
Confidence 2347888999999999887543
No 325
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.71 E-value=0.13 Score=48.39 Aligned_cols=92 Identities=12% Similarity=0.090 Sum_probs=56.6
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHH----HHHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVF----KALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~----kal~lGAd~V~iGr~~l~ 317 (371)
+.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|-.+-.+++ .+-++|||++++-.|+++
T Consensus 42 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 42 HKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 4567889999999765432111111 12345555666666789988855555566555 344589999999999887
Q ss_pred hhhcCChHHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l~ 335 (371)
... -.++++.++++.+.
T Consensus 122 ~~~-~s~~~l~~~f~~ia 138 (307)
T 3s5o_A 122 RGR-MSSAALIHHYTKVA 138 (307)
T ss_dssp GGG-CCHHHHHHHHHHHH
T ss_pred CCC-CCHHHHHHHHHHHH
Confidence 410 13556555555443
No 326
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.66 E-value=0.49 Score=45.37 Aligned_cols=143 Identities=12% Similarity=0.090 Sum_probs=86.3
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..|.+...++++.|+++|++++=.-.=.| +.+-. |.. ..++ .... +...-+... ...
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~------~tl~s----~~~---~~fq------~~~~-~~~~y~~~~---~~~ 87 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIV------EDEMS----DEA---KQVI------PGNA-DVSIYEIME---RCA 87 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCH------HHHCC----GGG---GGCC------CTTC-SSCHHHHHH---HHC
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeeccc------ccccC----cch---hccc------cCCC-CccHHHHHH---HhC
Confidence 46888899999999999999986532111 11100 000 0000 0000 000001111 112
Q ss_pred CCHH---HHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017434 215 LNWK---DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 215 ~~~~---~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
+.++ .+...++..+++++ =.+++.+.+..+.+.|+|.+.|... -...+..|..+.+ ...|||.+-|
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~-st~~d~~svd~l~~~~v~~~KI~S~-------~~~n~~LL~~va~---~gkPviLstG 156 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFI-STLFSRAAALRLQRMDIPAYKIGSG-------ECNNYPLIKLVAS---FGKPIILSTG 156 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEE-EEECSHHHHHHHHHHTCSCEEECGG-------GTTCHHHHHHHHT---TCSCEEEECT
T ss_pred CCHHHHHHHHHHHHHhCCeEE-EeeCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHh---cCCeEEEECC
Confidence 3444 45666666788876 4567889999999999999999532 1234566666654 2689999999
Q ss_pred CCCHHHHHHHHH----cCCCEEEE
Q 017434 292 VRRGTDVFKALA----LGASGVFV 311 (371)
Q Consensus 292 I~~~~dv~kal~----lGAd~V~i 311 (371)
..|-+++..|+. .|.+.+.+
T Consensus 157 mat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 157 MNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999987765 46655544
No 327
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.66 E-value=0.18 Score=47.66 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=57.3
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCC-CEEEEchhH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGA-SGVFVGRPV 315 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGA-d~V~iGr~~ 315 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+.-|=.+-.++++ +-++|| |+|++-.|+
T Consensus 34 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 34 IEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPY 113 (311)
T ss_dssp HHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCC
Confidence 35567899999999765442111111 123456666677777899998666656666664 334697 999999998
Q ss_pred HHhhhcCChHHHHHHHHHH
Q 017434 316 PFSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 316 l~~~~~~G~~gv~~~l~~l 334 (371)
++.. .++++.++++.+
T Consensus 114 y~~~---s~~~l~~~f~~v 129 (311)
T 3h5d_A 114 YNKP---SQEGMYQHFKAI 129 (311)
T ss_dssp SSCC---CHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHH
Confidence 8653 345554444443
No 328
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=94.66 E-value=0.26 Score=47.79 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=85.2
Q ss_pred CChHHHHHHHHHHHHc-CCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 136 KHRNVDAQLVKRAERA-GFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~a-G~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
.+++.+.+.++++.+. |++++-+.++.+ ++.
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~------------------------------------------------~~~ 197 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHG------------------------------------------------DLA 197 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSS------------------------------------------------CHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCC------------------------------------------------CHH
Confidence 4677777777777778 999987655321 111
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
.+.+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|- -...+..++.+.++++.. .+||
T Consensus 198 ~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE--------eP~~~~d~~~~~~l~~~~--~iPI 267 (383)
T 3toy_A 198 TDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIE--------EPVPQENLSGHAAVRERS--EIPI 267 (383)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE--------CCSCTTCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE--------CCCCcchHHHHHHHHhhc--CCCE
Confidence 2456788899886 567877742 456664 455567877764 112233577788888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++..+.+..|+.+++..| +|.|++--
T Consensus 268 a~dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 268 QAGENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp EECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999988 78887754
No 329
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=94.65 E-value=0.48 Score=44.15 Aligned_cols=188 Identities=18% Similarity=0.136 Sum_probs=105.5
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEecCCC-------------CCCHHHHh-------ccCCCceEEEE-ee
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWA-------------TSSVEEVS-------STGPGIRFFQL-YV 134 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~-------------~~~~eei~-------~~~~~~~~~QL-y~ 134 (371)
..+..|.++ |...|+.+.++|+..++.+.+ ..+++|+. +..+.|...=+ ++
T Consensus 21 ~~i~~~~a~--------D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~G 92 (287)
T 3b8i_A 21 RCYHTASVF--------DPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHG 92 (287)
T ss_dssp CCEECEECC--------SHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTC
T ss_pred CcEEEecCC--------CHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 345667654 558999999999887653321 13445432 23333432221 11
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
+.+++...+.+++..++|+.++.|- |.. .|++.... . +.. .+..
T Consensus 93 yg~~~~~~~~v~~l~~aGa~gv~iE-D~~--------------~pKrcgh~---------------~--gkl----~~~~ 136 (287)
T 3b8i_A 93 YGNALNVMRTVVELERAGIAALTIE-DTL--------------LPAQFGRK---------------S--TDL----ICVE 136 (287)
T ss_dssp SSSHHHHHHHHHHHHHHTCSEEEEE-CBC--------------CSCCTTTC---------------T--TCB----CCHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEc-CCC--------------CccccCCC---------------C--CCc----cCHH
Confidence 2366666777788888888887664 211 12211100 0 000 0011
Q ss_pred CCHHHHHHHHhhc-CCCEEEEEc--c-------CHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCC
Q 017434 215 LNWKDVKWLQTIT-SLPILVKGV--L-------TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV 284 (371)
Q Consensus 215 ~~~~~i~~ir~~~-~~pv~vK~v--~-------~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i 284 (371)
...+.|+.+++.- +.++.+-.. . ..+.++...++|||.|.+- ++++.+.+.++.+.+ ++
T Consensus 137 e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~--~~ 205 (287)
T 3b8i_A 137 EGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLV---------GVRDFAHLEAIAEHL--HI 205 (287)
T ss_dssp HHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEE---------CCCSHHHHHHHHTTC--CS
T ss_pred HHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEec---------CCCCHHHHHHHHHhC--CC
Confidence 1224456555543 223333332 1 2245778899999999983 245677788888877 68
Q ss_pred cEEEe-cCCCCHHHHHHHHHcCCCEEEEchhHHHh
Q 017434 285 PVFLD-GGVRRGTDVFKALALGASGVFVGRPVPFS 318 (371)
Q Consensus 285 ~via~-GGI~~~~dv~kal~lGAd~V~iGr~~l~~ 318 (371)
|++.. +|-...-++.+.-++|...|..|...+.+
T Consensus 206 P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 206 PLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp CEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHH
T ss_pred CEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 87743 33322234555557899999999987765
No 330
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=94.62 E-value=0.22 Score=48.06 Aligned_cols=119 Identities=10% Similarity=0.037 Sum_probs=82.2
Q ss_pred ChHHHHHHHHHHHHc-CCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 137 HRNVDAQLVKRAERA-GFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 137 d~~~~~~~~~~a~~a-G~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
+.+.+.+.++++.+. |++++-+.++.+. +..
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~------------------------------------------------~~~ 182 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDD------------------------------------------------PNI 182 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSS------------------------------------------------HHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCC------------------------------------------------HHH
Confidence 667777777777777 9999877654211 112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHHHHH----HHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDASLA----IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~~a----~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.+++.+. .+.|++.|- -...+..++.+.++++.. .+||+
T Consensus 183 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~iPIa 252 (372)
T 3tj4_A 183 DIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFE--------EPLWYDDVTSHARLARNT--SIPIA 252 (372)
T ss_dssp HHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEE--------SCSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEE--------CCCCchhHHHHHHHHhhc--CCCEE
Confidence 356789999987 577887742 466665433 334444442 111233577788888876 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++..+.+..|+.+++..| +|.|++--
T Consensus 253 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 279 (372)
T 3tj4_A 253 LGEQLYTVDAFRSFIDAGAVAYVQPDV 279 (372)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCT
T ss_pred eCCCccCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999987 78888743
No 331
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.61 E-value=0.078 Score=51.09 Aligned_cols=114 Identities=15% Similarity=0.011 Sum_probs=67.6
Q ss_pred ccCCCceEEEEeecCChHHHHHHHHHHHHcC-CcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCc
Q 017434 122 STGPGIRFFQLYVTKHRNVDAQLVKRAERAG-FKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDD 200 (371)
Q Consensus 122 ~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG-~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 200 (371)
+....|.++.|-+..|.+.+.++++.++++| +++|.++ ++-..|... |+... -| .+...+ ..
T Consensus 190 ~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~-NT~~~g~~i-di~~~--~~-~~~~~~------------~~ 252 (354)
T 4ef8_A 190 EVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCI-NSIGNGLVI-DAETE--SV-VIKPKQ------------GF 252 (354)
T ss_dssp HHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC-CCEEEEECE-ETTTT--EE-SCSGGG------------GE
T ss_pred HhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEe-cccCcceee-eccCC--cc-cccccc------------cc
Confidence 3444688999987777777778888888898 9988753 221000000 00000 00 000000 00
Q ss_pred chhhhHhhhhcccCCCHHHHHHHHhhc-CCCEEEE-EccCHHHHHHHHHhCCCEEEEe
Q 017434 201 SGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVK-GVLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~i~~ir~~~-~~pv~vK-~v~~~e~a~~a~~~Gad~I~vs 256 (371)
.+ ++...-.+..|+.+.++++.. ++||+.= ++.+.+|+.+++.+|||+|.+.
T Consensus 253 gG----lSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 253 GG----LGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp EE----EEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEEC
T ss_pred CC----CCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEh
Confidence 00 000001234689999999986 6898755 4689999999999999999984
No 332
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=94.60 E-value=0.33 Score=47.21 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=65.2
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||+
T Consensus 205 d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa 274 (390)
T 3ugv_A 205 DIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIEE--------PVVYDNFDGYAQLRHDL--KTPLM 274 (390)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHHhc--CCCEE
Confidence 456788899887 567887742 466664 3445567776631 12233677788888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
++..+.+..|+.+++..| +|.|++--..
T Consensus 275 ~dE~~~~~~~~~~~i~~~a~d~v~ik~~~ 303 (390)
T 3ugv_A 275 IGENFYGPREMHQALQAGACDLVMPDFMR 303 (390)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBHHH
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 999999999999999987 7888776433
No 333
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.58 E-value=0.12 Score=49.04 Aligned_cols=104 Identities=17% Similarity=0.046 Sum_probs=66.1
Q ss_pred CCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCc-chh
Q 017434 125 PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDD-SGL 203 (371)
Q Consensus 125 ~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 203 (371)
+-|.++.+-+..+.+...++++.++++|+++|.++-.+. + |. +.+ .+. .. ....+ ++.
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~--~-~~-~~~----~~~-~~------------~~~gg~~g~ 269 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTL--D-RS-LVQ----GMK-NC------------DQTGGLSGR 269 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBC--C-CT-TST----TST-TT------------TCSSEEEEG
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcc--c-cc-ccc----ccc-cc------------ccCCCcCCc
Confidence 357888876555556778889999999999998863211 1 11 110 000 00 00000 000
Q ss_pred hhHhhhhcccCCCHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 204 ASYVANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
...+..++.++.+++.+ ++||+.-| +.+.+++.+++++|||+|.+.
T Consensus 270 -------~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 270 -------PLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp -------GGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred -------hhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 00113467889999988 79988664 689999999999999999884
No 334
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=94.57 E-value=0.088 Score=48.38 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=53.0
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-HH---------HHHHHHcCCCEE
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-TD---------VFKALALGASGV 309 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~-~d---------v~kal~lGAd~V 309 (371)
+-++.+.++|++++++|. .-+..+++.++.+ -++.+.||+-. .+ ..++++.|||.+
T Consensus 166 ~~A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~-fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~i 231 (255)
T 3ldv_A 166 RLATLTKNAGLDGVVCSA-------------QEASLLKQHLGRE-FKLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYL 231 (255)
T ss_dssp HHHHHHHHTTCSEEECCH-------------HHHHHHHHHHCTT-SEEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECH-------------HHHHHHHHhcCCC-cEEEeCCcccCcCCccceeccCCHHHHHHcCCCEE
Confidence 346667789999998742 2456666666433 36778888742 23 567888999999
Q ss_pred EEchhHHHhhhcCChHHHHHHHHHHHHHH
Q 017434 310 FVGRPVPFSLAVDGEAGVRKVLQMLRDEF 338 (371)
Q Consensus 310 ~iGr~~l~~~~~~G~~gv~~~l~~l~~el 338 (371)
.+|||+..+ ..+ .+.++.+++|+
T Consensus 232 VvGr~I~~a---~dp---~~a~~~i~~ei 254 (255)
T 3ldv_A 232 VIGRPITQA---AHP---EVVLEEINSSL 254 (255)
T ss_dssp EECHHHHTC---SCH---HHHHHHHHHHC
T ss_pred EECHHHhCC---CCH---HHHHHHHHHhh
Confidence 999998753 222 34556666654
No 335
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=94.54 E-value=0.081 Score=52.00 Aligned_cols=102 Identities=21% Similarity=0.253 Sum_probs=67.0
Q ss_pred Cc-eEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhh
Q 017434 126 GI-RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 204 (371)
Q Consensus 126 ~~-~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (371)
.| .++.|-+.-+.+.+.++++.++++|+++|+++= +.. .|. |+.. + .+ .....+|.
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~N-tt~--~r~-dl~~-~--------~~---------~~GGlSG~- 325 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISN-TTT--QIN-DIKS-F--------EN---------KKGGVSGA- 325 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECC-CBS--CCC-CCGG-G--------TT---------CCSEEEEG-
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC-CCc--ccc-cccc-c--------cc---------ccCCcCCc-
Confidence 46 688888766666788999999999999998752 211 010 1100 0 00 00000110
Q ss_pred hHhhhhcccCCCHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 205 SYVANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
...+..++.|+++++.+ ++||+.-+ +.+.+||.+++++|||+|.+.
T Consensus 326 ------a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 326 ------KLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp ------GGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEES
T ss_pred ------cchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 01123568899999988 68987554 689999999999999999984
No 336
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=94.52 E-value=0.53 Score=45.91 Aligned_cols=116 Identities=10% Similarity=0.074 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCH
Q 017434 138 RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNW 217 (371)
Q Consensus 138 ~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (371)
++.+.+.++++.+.|++++-+.++ +..+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~---------------------------------------------------~~~d~ 192 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIK---------------------------------------------------PGWDV 192 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECB---------------------------------------------------TTBSH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeC---------------------------------------------------cchHH
Confidence 677777777777889998866542 11245
Q ss_pred HHHHHHHhhc--CCCEEEEEc--cCH---HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017434 218 KDVKWLQTIT--SLPILVKGV--LTA---EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 218 ~~i~~ir~~~--~~pv~vK~v--~~~---e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~G 290 (371)
+.++.+|+.+ +.++.+..- .+. +-++.+.+.|++.|- -...+..++.+.++++.. .+||+++.
T Consensus 193 ~~v~avR~a~G~~~~L~vDaN~~w~~~~~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~iPIa~dE 262 (400)
T 3mwc_A 193 EPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHE--------QPLHYEALLDLKELGERI--ETPICLDE 262 (400)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHHHGGGCCSCEE--------SCSCTTCHHHHHHHHHHS--SSCEEEST
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEe--------CCCChhhHHHHHHHHhhC--CCCEEEeC
Confidence 6788888877 467877642 233 335556677777763 112233577888888877 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 291 GVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 291 GI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
.+.+..|+.+++..| +|.|++--.
T Consensus 263 ~~~~~~~~~~~~~~~~~d~v~~k~~ 287 (400)
T 3mwc_A 263 SLISSRVAEFVAKLGISNIWNIKIQ 287 (400)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CcCCHHHHHHHHhcCCCCEEEEcch
Confidence 999999999999987 799988643
No 337
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=94.49 E-value=0.65 Score=44.11 Aligned_cols=117 Identities=18% Similarity=0.160 Sum_probs=82.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.++. ++..
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------------------------------~~~~ 168 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGE-------------------------------------------------NLKE 168 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecC-------------------------------------------------CHHH
Confidence 477777778888888999999875431 0111
Q ss_pred CHHHHHHHHhhc-CCCEEEEE--ccCHHHH----HHHHHhCCC--EEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTIT-SLPILVKG--VLTAEDA----SLAIQYGAA--GIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~--v~~~e~a----~~a~~~Gad--~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
+.+.++.+|+.- +.++.+-. ..+.+++ +.+.+.|++ .|- -...+..++.+.++++.. ++||
T Consensus 169 d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE--------~P~~~~~~~~~~~l~~~~--~ipi 238 (345)
T 2zad_A 169 DIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYE--------QPVRREDIEGLKFVRFHS--PFPV 238 (345)
T ss_dssp HHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEE--------CCSCTTCHHHHHHHHHHS--SSCE
T ss_pred HHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeee--------CCCCcccHHHHHHHHHhC--CCCE
Confidence 345677777762 35565542 2355553 556677888 653 111234677888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEE
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFV 311 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~i 311 (371)
++++.+.+..|+.+.+..| +|.|++
T Consensus 239 a~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 239 AADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred EEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 9999999999999999988 899999
No 338
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=94.47 E-value=0.29 Score=43.89 Aligned_cols=88 Identities=18% Similarity=0.200 Sum_probs=60.4
Q ss_pred HhccCCCceEEEE---eecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCC
Q 017434 120 VSSTGPGIRFFQL---YVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMD 196 (371)
Q Consensus 120 i~~~~~~~~~~QL---y~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (371)
+.+..+ |.++.+ -+.-+.+...++.+.++++|++.+..+. ++.
T Consensus 111 v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst--------------g~~------------------- 156 (225)
T 1mzh_A 111 IFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST--------------GFA------------------- 156 (225)
T ss_dssp HHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC--------------SCS-------------------
T ss_pred HHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC--------------CCC-------------------
Confidence 334444 667776 3334566678889999999999983221 110
Q ss_pred CCCcchhhhHhhhhcccCCCHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 197 KTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
....+|+.++.+++.+ ++||+.-| +.+.+++...+++|||.|-++
T Consensus 157 ---------------~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 157 ---------------PRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp ---------------SSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred ---------------CCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 0113678888888877 57876554 578999999999999977554
No 339
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=94.47 E-value=0.15 Score=50.06 Aligned_cols=153 Identities=12% Similarity=0.009 Sum_probs=92.3
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.||+++-+.++.|........-+.....++ .. ....+ ........+..
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~----~~-----------~~~p~-~~~~~~~~~~~ 204 (418)
T 3r4e_A 141 GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEP----AD-----------ASLPS-VTGWDTRKALN 204 (418)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---------------------------------CCCC-EEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccccccccccccc----cc-----------ccccc-cccccchhHHH
Confidence 4678888888888888999999998876531000000000000000 00 00000 00000000112
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.. .+||
T Consensus 205 ~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI 274 (418)
T 3r4e_A 205 YVPKLFEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLED--------CTPAENQEAFRLVRQHT--VTPL 274 (418)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEES--------CSCCSSGGGGHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCccCHHHHHHHHhcC--CCCE
Confidence 2457789999987 578888753 456664 5566778887741 11123456677888876 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++++.+.+..|+.+++..| +|.|++--
T Consensus 275 a~dE~~~~~~~~~~~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 275 AVGEIFNTIWDAKDLIQNQLIDYIRATV 302 (418)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EEcCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999988 89998864
No 340
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=94.45 E-value=3.1 Score=38.59 Aligned_cols=180 Identities=16% Similarity=0.151 Sum_probs=107.0
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~~ 141 (371)
|.++.|+. .+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ .|.+...- ..+.+..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 45567765 5444555445777777788886543 32 2345665532 12 22 45666653 3466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+- -| + ..-..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f~ 119 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVV--VPYYN-----------KP---T-----------------------------QRGLYEHFK 119 (294)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHHH
Confidence 789999999999999874 33320 00 0 001234466
Q ss_pred HHHhhcCCCEEEEEc-------cCHHHHHHHH-Hh-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 222 WLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v-------~~~e~a~~a~-~~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
.|.+.+++|+++=.+ .+++...++. +. .+-+|+-+. .++..+.++.+..+++..|+ +|.
T Consensus 120 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds~----------gd~~~~~~~~~~~~~~f~v~-~G~- 187 (294)
T 2ehh_A 120 TVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKEST----------PNMDRISEIVKRLGESFSVL-SGD- 187 (294)
T ss_dssp HHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC----------SCHHHHHHHHHHHCTTSEEE-ESS-
T ss_pred HHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEEE-ECc-
Confidence 777778999998764 5678777776 43 233343321 12444555655554455554 442
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 188 --d~~~~~~l~~G~~G~is~~an~ 209 (294)
T 2ehh_A 188 --DSLTLPMMALGAKGVISVANNV 209 (294)
T ss_dssp --GGGHHHHHHTTCCEEEESGGGT
T ss_pred --HHHHHHHHHCCCCEEEeCHHHh
Confidence 2447788999999999988643
No 341
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=94.43 E-value=1.1 Score=41.18 Aligned_cols=39 Identities=23% Similarity=0.226 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~G 290 (371)
++|+.+.++||+.|.+-. .+ .+...++.+.+ ++|+|.-|
T Consensus 165 ~rA~a~~eAGA~~ivlE~---------vp-~~~a~~it~~l--~iP~igIG 203 (264)
T 1m3u_A 165 SDALALEAAGAQLLVLEC---------VP-VELAKRITEAL--AIPVIGIG 203 (264)
T ss_dssp HHHHHHHHHTCCEEEEES---------CC-HHHHHHHHHHC--SSCEEEES
T ss_pred HHHHHHHHCCCcEEEEec---------CC-HHHHHHHHHhC--CCCEEEeC
Confidence 467889999999999832 33 35677888888 79999876
No 342
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=94.41 E-value=0.19 Score=49.03 Aligned_cols=145 Identities=15% Similarity=-0.011 Sum_probs=91.3
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.||+++-+.++.+... .+. ...|.... .+ ..+....+..
T Consensus 131 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~---~~~---~~~~~~~~---------------~g----~~~~~~~~~~ 185 (401)
T 3sbf_A 131 SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGV---PTD---LHTTQNPT---------------EG----SYYDQDQYMD 185 (401)
T ss_dssp ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSC---GGG---SCCCSSCC---------------SS----EECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---ccc---cccccccc---------------cc----ccccchHHHH
Confidence 46778888888888889999999887643210 000 00000000 00 0000000122
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||
T Consensus 186 ~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPI 255 (401)
T 3sbf_A 186 NTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIED--------ILPPNQTEWLDNIRSQS--SVSL 255 (401)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------SSCTTCGGGHHHHHTTC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCChhHHHHHHHHHhhC--CCCE
Confidence 3467799999987 578888753 466664 4556778877741 11122455677777765 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++++.+.+..|+.++++.| +|.|++--.
T Consensus 256 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 284 (401)
T 3sbf_A 256 GLGELFNNPEEWKSLIANRRIDFIRCHVS 284 (401)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCGG
T ss_pred EeCCccCCHHHHHHHHhcCCCCEEecCcc
Confidence 9999999999999999987 898887643
No 343
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=94.41 E-value=0.45 Score=45.58 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=86.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.|++++-+.+++ ++..
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~-------------------------------------------------~~~~ 169 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCG-------------------------------------------------DEEQ 169 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCC-------------------------------------------------CHHH
Confidence 577777777788888999998776532 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.. .+||+
T Consensus 170 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa 239 (356)
T 3ro6_B 170 DFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFIEQ--------PFPAGRTDWLRALPKAI--RRRIA 239 (356)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCEEC--------CSCTTCHHHHHTSCHHH--HHTEE
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCCCcHHHHHHHHhcC--CCCEE
Confidence 356788888887 578887742 455554 5566778887741 11233577777777766 68999
Q ss_pred EecCCCCHHHHHHHHHcC--CCEEEEchhH
Q 017434 288 LDGGVRRGTDVFKALALG--ASGVFVGRPV 315 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG--Ad~V~iGr~~ 315 (371)
++..+.+..|+.+++..| +|.|++--..
T Consensus 240 ~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 240 ADESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp ESTTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred eCCcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 999999999999999976 8999987543
No 344
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.41 E-value=0.25 Score=46.57 Aligned_cols=92 Identities=11% Similarity=0.190 Sum_probs=58.4
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-. .--.+.+..+.+.+ +++|||+--|=.+-.++++ +-++|||++++-.|+.
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~ 113 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPS 113 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 3556789999999966533211111 11234566667777 7999998656556666654 3347999999999983
Q ss_pred HhhhcCChHHHHHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQMLRDEF 338 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l~~el 338 (371)
+ ..++++.++++.+.+..
T Consensus 114 ~----~s~~~l~~~f~~va~a~ 131 (313)
T 3dz1_A 114 L----RTDEQITTYFRQATEAI 131 (313)
T ss_dssp C----CSHHHHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHHHHhC
Confidence 3 24666666665555443
No 345
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=94.39 E-value=0.21 Score=48.69 Aligned_cols=88 Identities=9% Similarity=-0.060 Sum_probs=66.6
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--c-CHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--L-TAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~-~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
+.+.++.+|+.+ +.++.+..- . +.+++ +.+.+.|++.|-= ...+..++.+.++++.+ .+||
T Consensus 186 d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPI 255 (394)
T 3mqt_A 186 IVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIEA--------CLQHDDLIGHQKLAAAI--NTRL 255 (394)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEES--------CSCTTCHHHHHHHHHHS--SSEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEEC--------CCCcccHHHHHHHHhhC--CCCE
Confidence 457789999987 578888753 4 66664 4455678887741 12233677888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++++.+.+..|+.++++.| +|.|++--
T Consensus 256 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 283 (394)
T 3mqt_A 256 CGAEMSTTRFEAQEWLEKTGISVVQSDY 283 (394)
T ss_dssp EECTTCCHHHHHHHHHHHHCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999986 89998854
No 346
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=94.38 E-value=0.17 Score=49.31 Aligned_cols=87 Identities=11% Similarity=0.024 Sum_probs=65.3
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccch-HHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPAT-VMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~i~v 286 (371)
+.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-= ...+.. ++.+.++++.. .+||
T Consensus 185 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~~l~~~~--~iPI 254 (392)
T 3ddm_A 185 DVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWLEE--------PLRADRPAAEWAELAQAA--PMPL 254 (392)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTSCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEEC--------CCCccchHHHHHHHHHhc--CCCE
Confidence 456789999987 578888752 456654 4556778887741 112234 77888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
+++..+.+..|+.+++..| +|.|++-
T Consensus 255 a~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 255 AGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp EECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999999987 7888874
No 347
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.37 E-value=0.06 Score=50.64 Aligned_cols=89 Identities=20% Similarity=0.220 Sum_probs=55.3
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHHH
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 317 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l~ 317 (371)
+.+++.|+|+|.+.++.|-...-. .--.+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|+++
T Consensus 32 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 111 (300)
T 3eb2_A 32 DDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYF 111 (300)
T ss_dssp HHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSS
T ss_pred HHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 456789999998865433211111 1123456666667777899887555445555553 33489999999999987
Q ss_pred hhhcCChHHHHHHHHHH
Q 017434 318 SLAVDGEAGVRKVLQML 334 (371)
Q Consensus 318 ~~~~~G~~gv~~~l~~l 334 (371)
.. .++++.++++.+
T Consensus 112 ~~---~~~~l~~~f~~v 125 (300)
T 3eb2_A 112 PL---KDAQIESYFRAI 125 (300)
T ss_dssp CC---CHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHH
Confidence 53 455555554444
No 348
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=94.33 E-value=0.2 Score=49.11 Aligned_cols=132 Identities=13% Similarity=0.097 Sum_probs=90.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.+..+..+. .+. .+ ...+...
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~------~g~-~~-----------------------------~~~~~~~ 186 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAY------SGH-QL-----------------------------SLEVLDR 186 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTT------CCB-CC-----------------------------CHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccc------ccc-cc-----------------------------chhhHHH
Confidence 46777777788888899999988765432110 000 00 0001223
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.+ .+||+
T Consensus 187 d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa 256 (412)
T 4e4u_A 187 CELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEE--------PVPPGQEEAIAQVAKHT--SIPIA 256 (412)
T ss_dssp HHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCSSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCcEEEC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 467799999987 578887742 456664 4556778887741 11233677888888876 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++..+.+..++.+++..| +|.|++--
T Consensus 257 ~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 257 TGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred ecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999988 89988753
No 349
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=94.27 E-value=0.1 Score=48.70 Aligned_cols=77 Identities=18% Similarity=0.248 Sum_probs=50.4
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+++|||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 28 IEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 35567899999999665432111111 123456666666767899987666555566554 3347999999999987
Q ss_pred Hh
Q 017434 317 FS 318 (371)
Q Consensus 317 ~~ 318 (371)
+.
T Consensus 108 ~~ 109 (291)
T 3a5f_A 108 NK 109 (291)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 350
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.25 E-value=0.19 Score=48.14 Aligned_cols=89 Identities=17% Similarity=0.118 Sum_probs=53.1
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVPF 317 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l~ 317 (371)
++.+++.|+|+|.+.++.|-...-...-...+.+. .+.+++|||+--|=.+-.++++ +-++|||+|++-.|+++
T Consensus 53 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 53 GKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 35567899999999665332111111112222233 3456899987666555555553 33479999999999986
Q ss_pred h-hhcCChHHHHHHHHHHH
Q 017434 318 S-LAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 318 ~-~~~~G~~gv~~~l~~l~ 335 (371)
. . .++++.++++.+.
T Consensus 131 ~~~---s~~~l~~~f~~IA 146 (344)
T 2hmc_A 131 RGS---VIAAQKAHFKAIL 146 (344)
T ss_dssp STT---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 4 3 3566555554443
No 351
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.22 E-value=0.43 Score=44.15 Aligned_cols=97 Identities=18% Similarity=0.117 Sum_probs=64.5
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc----CCCCccchHHH-H---HHHHHHhcCCCc
Q 017434 214 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR----QLDYVPATVMA-L---EEVVQAAKGRVP 285 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~----~~~~~~~~~~~-l---~~i~~~~~~~i~ 285 (371)
..+...++++++. +-|+++-...+.-.|+.+.++|+|.|.++...+. .-|..+-+++. + ..+++.. .+.|
T Consensus 15 ~~t~~~lr~~~~~-g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~~ 92 (275)
T 3vav_A 15 AVTVPKLQAMREA-GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRAL 92 (275)
T ss_dssp CCCHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSSE
T ss_pred CcCHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCCC
Confidence 3566667666654 5788888888899999999999999965432221 12344445443 3 3333333 2589
Q ss_pred EEEec---CCCCHHHHH----HHHHcCCCEEEEc
Q 017434 286 VFLDG---GVRRGTDVF----KALALGASGVFVG 312 (371)
Q Consensus 286 via~G---GI~~~~dv~----kal~lGAd~V~iG 312 (371)
|++|- |..++++++ +.+..||++|-|=
T Consensus 93 vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 93 IVADLPFGTYGTPADAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp EEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 99995 456778875 5666899999875
No 352
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=94.22 E-value=3.8 Score=38.74 Aligned_cols=185 Identities=15% Similarity=0.013 Sum_probs=104.6
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~~ 141 (371)
|.++.|+.-.+-.+.++-..+++-..+.|+...+ +| +.+.+.+|-. +. .+ -|.++..-. .+.+..
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA-LRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC-SSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHH
Confidence 4456666433333444444677777778876543 32 2345655532 12 22 456666643 466677
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+-+ | + ..-..+..+
T Consensus 119 i~la~~A~~~Gadavlv~--~P~Y~~-----------~---s-----------------------------~~~l~~~f~ 153 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA--PVSYTP-----------L---T-----------------------------QEEAYHHFA 153 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCCSSC-----------C---C-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCCC-----------C---C-----------------------------HHHHHHHHH
Confidence 789999999999999763 333200 0 0 000234466
Q ss_pred HHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 222 WLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
.|.+.+++||++=.+ .+++...++.+.. +-+|+-+.. . ....+..+.++.+..+++..|+ +|
T Consensus 154 ~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiKdssg-d-----~~~~~~~~~~l~~~~~~~f~v~-~G--- 223 (332)
T 2r8w_A 154 AVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPLP-A-----DADYAGELARLRPKLSDDFAIG-YS--- 223 (332)
T ss_dssp HHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEEECCC-T-----TCCHHHHHHHHTTTSCTTCEEE-EC---
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEEeCCC-C-----chhHHHHHHHHHHhcCCCEEEE-eC---
Confidence 777778999998753 4677777776532 233333220 0 0001445555554443344444 34
Q ss_pred CHHHHHHHHHcCCCEEEEchhHH
Q 017434 294 RGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+...++.++.+|++++.-+..-+
T Consensus 224 ~D~~~l~~l~~G~~G~is~~anv 246 (332)
T 2r8w_A 224 GDWGCTDATLAGGDTWYSVVAGL 246 (332)
T ss_dssp CHHHHHHHHHTTCSEEEESGGGT
T ss_pred chHHHHHHHHCCCCEEEeCHHHh
Confidence 34667888999999999997543
No 353
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=94.21 E-value=0.26 Score=47.98 Aligned_cols=88 Identities=7% Similarity=-0.086 Sum_probs=66.5
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--c-CHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--L-TAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~-~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
+.+.++.+|+.+ +.++.+..- . +.+++ +.+.+.|++.|-- ...+..++.+.++++.. ++||
T Consensus 191 d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPI 260 (394)
T 3mkc_A 191 VAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAEA--------TLQHDDLSGHAKLVENT--RSRI 260 (394)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEES--------CSCTTCHHHHHHHHHHC--SSCB
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEEC--------CCCchhHHHHHHHHhhC--CCCE
Confidence 457789999987 578888753 4 66664 4455678877741 12233677888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++++.+.+..|+.++++.| +|.|++--
T Consensus 261 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 261 CGAEMSTTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EeCCCCCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999987 89998854
No 354
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=94.21 E-value=0.17 Score=49.37 Aligned_cols=136 Identities=13% Similarity=0.035 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCC-CCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDT-PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~-p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
+.+.+.+.++++.+.||+++-+.+.. ...|.. |.-|. .+. . +..+...
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~----~g~--------------~------~~~~~~~ 194 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSR-------EGVFL----EGP--------------L------PSETIKI 194 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCC-------TTCCC----SSS--------------C------CHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccc-------ccCcc----cCC--------------C------chHHHHH
Confidence 67777788888889999999876410 000110 10010 000 0 0011233
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ ++||+
T Consensus 195 ~~e~v~avr~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~d~~~~~~l~~~~--~iPIa 264 (403)
T 2ox4_A 195 GVERVEAIRNAVGPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEE--------INTPLNPRLLKEAKKKI--DIPLA 264 (403)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTSTHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEE
Confidence 567799999987 578888752 466664 4455667665531 11233577788888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++.+.+..++.+++..| +|.|++--
T Consensus 265 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 291 (403)
T 2ox4_A 265 SGERIYSRWGFLPFLEDRSIDVIQPDL 291 (403)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCH
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 999999999999999987 89998854
No 355
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.21 E-value=0.15 Score=47.83 Aligned_cols=85 Identities=13% Similarity=0.097 Sum_probs=61.0
Q ss_pred HHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc--CCCCc---cchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 222 WLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR--QLDYV---PATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~--~~~~~---~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
-+.+..+.-++ ..+.+++.|+.+.++||+.|.+-....+ ...+| ....+.|.++++.+ ++||++-+++..-.
T Consensus 15 ~~~~~~kggv~-~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v--~iPvl~k~~i~~id 91 (297)
T 4adt_A 15 GWCEMLKGGVI-MDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI--SINVLAKVRIGHFV 91 (297)
T ss_dssp HHHHTTTTCEE-EEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC--CSEEEEEEETTCHH
T ss_pred hHHHHhcCCcc-cCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc--CCCEEEeccCCcHH
Confidence 34444444444 5667889999999999999998621110 01111 24678888898887 79999998888888
Q ss_pred HHHHHHHcCCCEE
Q 017434 297 DVFKALALGASGV 309 (371)
Q Consensus 297 dv~kal~lGAd~V 309 (371)
++..+.++|||.|
T Consensus 92 e~qil~aaGAD~I 104 (297)
T 4adt_A 92 EAQILEELKVDML 104 (297)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEE
Confidence 8887888999999
No 356
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=94.19 E-value=0.15 Score=47.51 Aligned_cols=73 Identities=29% Similarity=0.290 Sum_probs=54.6
Q ss_pred ccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-------------HHHHHHH
Q 017434 236 VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-------------TDVFKAL 302 (371)
Q Consensus 236 v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~-------------~dv~kal 302 (371)
+.+.+++..|.+.|||.|.+-.. ....+-.|+...+..+++.+ ++||.+-=--|.+ +|+..+.
T Consensus 46 ~~s~~~a~~A~~gGAdRIELc~~--l~~GGlTPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 46 VDSVESAVNAERGGADRIELCSG--LSEGGTTPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp ESSHHHHHHHHHHTCSEEEECBC--GGGTCBCCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCCCEEEECCC--CCCCCCCCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 37899999999999999998532 11112245677788777765 6888875333333 7999999
Q ss_pred HcCCCEEEEc
Q 017434 303 ALGASGVFVG 312 (371)
Q Consensus 303 ~lGAd~V~iG 312 (371)
++|||+|.+|
T Consensus 122 ~~GAdGvVfG 131 (287)
T 3iwp_A 122 LYGADGLVFG 131 (287)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEe
Confidence 9999999999
No 357
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=94.17 E-value=0.19 Score=48.50 Aligned_cols=90 Identities=19% Similarity=0.235 Sum_probs=56.6
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.+..|-...-.. -..+.+..+.+.+.+++|||+.-|=.+-.++++ +-++|||++++-.|++
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY 165 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY 165 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45678899999999665432111111 123455666666777899998555455566554 3347999999999987
Q ss_pred HhhhcCChHHHHHHHHHH
Q 017434 317 FSLAVDGEAGVRKVLQML 334 (371)
Q Consensus 317 ~~~~~~G~~gv~~~l~~l 334 (371)
+.. .++++.++++.+
T Consensus 166 ~k~---sq~gl~~hf~~I 180 (360)
T 4dpp_A 166 GKT---SIEGLIAHFQSV 180 (360)
T ss_dssp SCC---CHHHHHHHHHTT
T ss_pred CCC---CHHHHHHHHHHH
Confidence 542 455555554443
No 358
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=94.17 E-value=0.2 Score=47.00 Aligned_cols=79 Identities=27% Similarity=0.479 Sum_probs=55.1
Q ss_pred hhcCCCEEEE--E-------c---cCHHH----HHHHHHhCCC----EEEEeCCCCcCCCCccchHHHHHHHHHHhcCCC
Q 017434 225 TITSLPILVK--G-------V---LTAED----ASLAIQYGAA----GIIVSNHGARQLDYVPATVMALEEVVQAAKGRV 284 (371)
Q Consensus 225 ~~~~~pv~vK--~-------v---~~~e~----a~~a~~~Gad----~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i 284 (371)
+.+++|+++- . + .+++. ++.+.++|+| .|++-- + +...++.+.. .+
T Consensus 173 ~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y-----------~-e~f~~Vv~a~--~v 238 (307)
T 3fok_A 173 AAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPV-----------V-EEMERVMEST--TM 238 (307)
T ss_dssp HHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEEC-----------C-TTHHHHGGGC--SS
T ss_pred HHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCC-----------c-HHHHHHHHhC--CC
Confidence 4568998874 1 1 23433 6778899999 998821 1 3456666655 69
Q ss_pred cEEEecCCCC--HHHHH----HHHH-cCCCEEEEchhHHH
Q 017434 285 PVFLDGGVRR--GTDVF----KALA-LGASGVFVGRPVPF 317 (371)
Q Consensus 285 ~via~GGI~~--~~dv~----kal~-lGAd~V~iGr~~l~ 317 (371)
||+..||=.. .++++ +++. .||.+|.+||-+++
T Consensus 239 PVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 239 PTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp CEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 9999998773 45655 5666 59999999998765
No 359
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.15 E-value=1.1 Score=38.97 Aligned_cols=87 Identities=20% Similarity=0.146 Sum_probs=52.3
Q ss_pred HHHHHHHhhc-CCCEEE--EEccC-HHH-HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE-ecC
Q 017434 218 KDVKWLQTIT-SLPILV--KGVLT-AED-ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL-DGG 291 (371)
Q Consensus 218 ~~i~~ir~~~-~~pv~v--K~v~~-~e~-a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via-~GG 291 (371)
+.++++++.+ +.|+++ |. .+ ++. ++.+.++|+|+|+++...+ ...+..+.+..+.. .+++.+ .-.
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~~-~di~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~~--g~~~gv~~~s 112 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMKT-MDAGELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQAH--NKGVVVDLIG 112 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEEE-CSCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH--TCEEEEECTT
T ss_pred HHHHHHHHhCCCCeEEEEEEe-cCccHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHHc--CCceEEEEec
Confidence 5688898887 788886 64 45 665 8999999999999954322 11222222222222 345422 223
Q ss_pred CCCHHHHH-HHHHcCCCEEEEch
Q 017434 292 VRRGTDVF-KALALGASGVFVGR 313 (371)
Q Consensus 292 I~~~~dv~-kal~lGAd~V~iGr 313 (371)
..++.+.. .+...|+|.|.+..
T Consensus 113 ~~~p~~~~~~~~~~g~d~v~~~~ 135 (207)
T 3ajx_A 113 IEDKATRAQEVRALGAKFVEMHA 135 (207)
T ss_dssp CSSHHHHHHHHHHTTCSEEEEEC
T ss_pred CCChHHHHHHHHHhCCCEEEEEe
Confidence 33667644 44457999995543
No 360
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.13 E-value=0.89 Score=40.11 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=54.3
Q ss_pred HHHHHHHHhhcCCCEEEEEc--cCHHHHHHHHHhCCCEEEEeCC-CCc--CCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017434 217 WKDVKWLQTITSLPILVKGV--LTAEDASLAIQYGAAGIIVSNH-GAR--QLDYVPATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v--~~~e~a~~a~~~Gad~I~vs~~-gg~--~~~~~~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
.+.++.++. ++|++ |.+ .+.++. .+.+..+|++.+.+. ||+ ..|| +.+..+.. .+.|++..||
T Consensus 87 ~~~~~~l~~--~~~vi-ka~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG~~fdW-----~~l~~~~~---~~~p~~LAGG 154 (203)
T 1v5x_A 87 PEWAEAVGR--FYPVI-KAFPLEGPARP-EWADYPAQALLLDGKRPGSGEAYPR-----AWAKPLLA---TGRRVILAGG 154 (203)
T ss_dssp HHHHHHHTT--TSCEE-EEEECSSSCCG-GGGGSSCSEEEEECSSTTSCCCCCG-----GGGHHHHH---TTSCEEECSS
T ss_pred HHHHHHhcc--CCCEE-EEEEcCChHhh-hhhhcCCCEEEEcCCCCCCCCccCH-----HHHHhhhc---cCCcEEEECC
Confidence 344555522 57776 543 222333 333444899999864 433 3343 33443211 2579999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
+. ++++.+++..++.+|=+.+-+
T Consensus 155 L~-peNV~~ai~~~p~gVDvsSGv 177 (203)
T 1v5x_A 155 IA-PENLEEVLALRPYALDLASGV 177 (203)
T ss_dssp CC-STTHHHHHHHCCSEEEESGGG
T ss_pred CC-HHHHHHHHhcCCCEEEeCCce
Confidence 95 899999987799999999865
No 361
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=93.98 E-value=0.28 Score=48.23 Aligned_cols=144 Identities=15% Similarity=0.007 Sum_probs=91.6
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.||+++-+.++..... .+. ...|.+... + .+.....+..
T Consensus 152 ~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~---~~~---~~~~~~~~~---------------~----~~~~~~~~~~ 206 (422)
T 3tji_A 152 GETLEALFASVDALIAQGYRHIRCQLGFYGGT---PSA---LHAPDNPTP---------------G----AWFDQQEYMS 206 (422)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBC---GGG---SCCCSSCCS---------------S----EECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---ccc---ccccccccc---------------c----ccccchhHHH
Confidence 46778888888888889999998887643110 000 000000000 0 0000000112
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||
T Consensus 207 ~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI 276 (422)
T 3tji_A 207 NTVEMFHALREKYGWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIED--------ILPPQQSAWLEQVRQQS--CVPL 276 (422)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCGGGGGGHHHHHHHC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEEC--------CCChhhHHHHHHHHhhC--CCCE
Confidence 3467799999987 578888753 466664 4455678877741 11223566778888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++..+.+..|+.++++.| +|.|++--
T Consensus 277 a~dE~~~~~~~~~~ll~~ga~d~v~~k~ 304 (422)
T 3tji_A 277 ALGELFNNPAEWHDLIVNRRIDFIRCHV 304 (422)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred EEeCCcCCHHHHHHHHhcCCCCEEecCc
Confidence 9999999999999999987 89988854
No 362
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=93.96 E-value=0.45 Score=46.84 Aligned_cols=153 Identities=11% Similarity=0.023 Sum_probs=93.2
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.||+++-+.++.|.... .++.+. .. ... ........+ ........+..
T Consensus 148 ~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~-------~~g~~~----~~---~~~-~~~~~~~p~-~~~~d~~~~~~ 211 (425)
T 3vcn_A 148 GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLAS-------TYGVSK----DK---MFY-EPADNDLPT-ENIWSTAKYLN 211 (425)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC-------CTTCSS----CS---SCC-CCCCBSSCC-EEEECHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCccccc-------cccccc----cc---ccc-Ccccccccc-cccccchhHHH
Confidence 357788888888888899999998877532100 000000 00 000 000000000 00000000123
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-- ...+..++.+.++++.+ .+||
T Consensus 212 ~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI 281 (425)
T 3vcn_A 212 SVPKLFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLED--------SVPAENQAGFRLIRQHT--TTPL 281 (425)
T ss_dssp TTHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCCSSTTHHHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCChhhHHHHHHHHhcC--CCCE
Confidence 4578899999987 578888753 466664 5566778887752 11123556778888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++++.+.+..++.++++.| +|.|++--
T Consensus 282 a~dE~~~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 282 AVGEIFAHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCh
Confidence 9999999999999999988 89998764
No 363
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.95 E-value=0.15 Score=51.08 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=54.3
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
.+.++.+.++|+|.|.++...|. ....++.+..+++.++ ++||++ |++.+.+++.++..+|||+|.+|.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGH----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHhCCCEEEEEecCCc----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEcC
Confidence 46788999999999999543221 1236778888888874 589887 778899999999999999999943
No 364
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=93.94 E-value=0.12 Score=47.11 Aligned_cols=79 Identities=22% Similarity=0.333 Sum_probs=49.3
Q ss_pred HHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH-H---------HHHHHHcCCCEEE
Q 017434 241 DASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT-D---------VFKALALGASGVF 310 (371)
Q Consensus 241 ~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~-d---------v~kal~lGAd~V~ 310 (371)
-++.+.++|+|++++|.+ -...+++.++.+ .++.+.||+-.. + ..+++..|||.+.
T Consensus 149 ~A~~a~~~g~~GvV~s~~-------------e~~~ir~~~~~~-fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lV 214 (239)
T 3tr2_A 149 MATLAKSAGLDGVVCSAQ-------------EAALLRKQFDRN-FLLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLV 214 (239)
T ss_dssp HHHHHHHHTCCEEECCHH-------------HHHHHHTTCCTT-SEEEECCBC----------CCBCHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEEECch-------------hHHHHHHhcCCC-cEEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEE
Confidence 466778889999987531 223455544323 477889998433 2 5578889999999
Q ss_pred EchhHHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 311 VGRPVPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 311 iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
+||+++.+ ..+ .+.++.+++++.
T Consensus 215 vGr~I~~a---~dp---~~a~~~i~~~i~ 237 (239)
T 3tr2_A 215 IGRPITQS---TDP---LKALEAIDKDIK 237 (239)
T ss_dssp ECHHHHTS---SSH---HHHHHHHHHHC-
T ss_pred EChHHhCC---CCH---HHHHHHHHHHHh
Confidence 99998743 122 234556666543
No 365
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=93.90 E-value=0.27 Score=48.01 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=65.5
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||
T Consensus 195 ~~~e~v~avRea~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPI 264 (410)
T 2qq6_A 195 AMVARVAAVREAVGPEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEE--------PTPPENLDALAEVRRST--STPI 264 (410)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHTTC--SSCE
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCE
Confidence 3567799999987 578887742 466664 4456678887641 11234577788887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
++++.+.+..++.+++..| +|.|++-
T Consensus 265 a~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 265 CAGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999987 8999884
No 366
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=93.89 E-value=0.55 Score=45.90 Aligned_cols=86 Identities=9% Similarity=-0.031 Sum_probs=66.2
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|-.- ...++.+.++++.+ .+||+
T Consensus 199 ~~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P----------~~d~~~~~~l~~~~--~iPIa 266 (409)
T 3go2_A 199 LRAHLEALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEID----------SYSPQGLAYVRNHS--PHPIS 266 (409)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECC----------CSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeC----------cCCHHHHHHHHhhC--CCCEE
Confidence 457799999987 578888753 466664 44556788888631 13667788888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++.+.+..++.+++..| +|.|++--
T Consensus 267 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 267 SCETLFGIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEEEECH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEeCC
Confidence 999999999999999988 89988854
No 367
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=93.86 E-value=4.2 Score=37.94 Aligned_cols=181 Identities=20% Similarity=0.209 Sum_probs=106.3
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+. .+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ 95 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEK 95 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHH
Confidence 355567765 5444555455777777788986443 3 23445665532 12 22 45666653 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+. -| + ..-..+..
T Consensus 96 ai~la~~A~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f 130 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVV--TPYYN-----------KP---T-----------------------------QEGLYQHY 130 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7889999999999999874 33320 00 0 00123445
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHH-Hh-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC---CCcEEE
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG---RVPVFL 288 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~-~~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~via 288 (371)
+.|.+.+++||++=.+ .+++...++. +. .+-+|+-+. .++..+.++.+..++ +..| .
T Consensus 131 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~~f~v-~ 199 (306)
T 1o5k_A 131 KYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIXEAN----------PDIDQIDRTVSLTKQARSDFMV-W 199 (306)
T ss_dssp HHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC----------CCHHHHHHHHHHHHHHCTTCEE-E
T ss_pred HHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEeCCC----------CCHHHHHHHHHhcCCCCCcEEE-E
Confidence 6777778999998764 4677777776 43 233444322 123344445444432 4555 3
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 289 DGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+|. ...++.++.+|++++.-+..-+
T Consensus 200 ~G~---d~~~l~~l~~G~~G~is~~an~ 224 (306)
T 1o5k_A 200 SGN---DDRTFYLLCAGGDGVISVVSNV 224 (306)
T ss_dssp ESS---GGGHHHHHHHTCCEEEESGGGT
T ss_pred ECc---HHHHHHHHHCCCCEEEecHHHh
Confidence 442 3457888999999999987543
No 368
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.83 E-value=0.27 Score=45.23 Aligned_cols=42 Identities=26% Similarity=0.234 Sum_probs=36.4
Q ss_pred CHHHHHHHHhhcCCCEEEEEc-cCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v-~~~e~a~~a~~~Gad~I~vs~ 257 (371)
..+.++++|+.+++||.+.+. .+++++..++.+|||+++|.+
T Consensus 193 ~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 467899999988999999865 559999999999999999954
No 369
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=93.76 E-value=0.59 Score=44.92 Aligned_cols=116 Identities=22% Similarity=0.280 Sum_probs=79.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.++ +..
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~---------------------------------------------------~~~ 175 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIK---------------------------------------------------PGW 175 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB---------------------------------------------------TTB
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecC---------------------------------------------------hHH
Confidence 36777777778888899998876431 112
Q ss_pred CHHHHHHHHhhc-CCCEEEEEc--cCHHH---HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017434 216 NWKDVKWLQTIT-SLPILVKGV--LTAED---ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 289 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~v--~~~e~---a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~ 289 (371)
..+.++.+|+.+ ++++.+..- .+.++ ++.+.+.|++.|- -...+..++.+.++++.. ++||+++
T Consensus 176 d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~ipIa~d 245 (375)
T 1r0m_A 176 DVQPVRATREAFPDIRLTVDANSAYTLADAGRLRQLDEYDLTYIE--------QPLAWDDLVDHAELARRI--RTPLCLD 245 (375)
T ss_dssp SHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHTTGGGCCSCEE--------CCSCTTCSHHHHHHHHHC--SSCEEES
T ss_pred HHHHHHHHHHHcCCCeEEEeCCCCCCHHHHHHHHHHHhCCCcEEE--------CCCCcccHHHHHHHHHhC--CCCEEec
Confidence 346677777766 566776632 23333 3334456766663 111233567788888776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 290 GGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 290 GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
..+.+..|+.+++..| +|.|++-
T Consensus 246 E~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 246 ESVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp TTCCSHHHHHHHHHHTSCSEEEEC
T ss_pred CccCCHHHHHHHHHhCCCCEEEEC
Confidence 9999999999999987 8999983
No 370
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.73 E-value=4.2 Score=37.49 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~G 290 (371)
++++.+.++|||.|.+- +.+.. ...+|.+.+ ++|+|.-|
T Consensus 177 ~rA~a~~eAGA~~ivlE---------~vp~~-~a~~It~~l--~iP~igIG 215 (275)
T 3vav_A 177 RDARAVEEAGAQLIVLE---------AVPTL-VAAEVTREL--SIPTIGIG 215 (275)
T ss_dssp HHHHHHHHHTCSEEEEE---------SCCHH-HHHHHHHHC--SSCEEEES
T ss_pred HHHHHHHHcCCCEEEec---------CCCHH-HHHHHHHhC--CCCEEEEc
Confidence 56788899999999983 24443 778888888 79999876
No 371
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=93.71 E-value=0.14 Score=46.66 Aligned_cols=75 Identities=20% Similarity=0.254 Sum_probs=49.8
Q ss_pred HHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-H---------HHHHHHHcCCCEEEEchh
Q 017434 245 AIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRG-T---------DVFKALALGASGVFVGRP 314 (371)
Q Consensus 245 a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~-~---------dv~kal~lGAd~V~iGr~ 314 (371)
..+.|.++++.+ ..+ +.++++..+ ..+++.+|||+.. . .+.+++..|||.+.+||+
T Consensus 152 ~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 217 (246)
T 2yyu_A 152 AKESGLDGVVCS------------ANE-AAFIKERCG-ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRS 217 (246)
T ss_dssp HHHHTCCEEECC------------HHH-HHHHHHHHC-TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHH
T ss_pred HHHhCCCEEEeC------------HHH-HHHHHHhcC-CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHh
Confidence 467888887542 234 666776664 3459999999842 2 377788899999999999
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 315 VPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 315 ~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
++.+ .. ..+.++.+++++.
T Consensus 218 I~~a---~d---p~~a~~~l~~~i~ 236 (246)
T 2yyu_A 218 LTRA---AD---PLRTYARLQHEWN 236 (246)
T ss_dssp HHTS---SS---HHHHHHHHHHHCC
T ss_pred hcCC---CC---HHHHHHHHHHHHH
Confidence 8753 12 2345555555443
No 372
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=93.67 E-value=0.44 Score=45.87 Aligned_cols=88 Identities=13% Similarity=0.003 Sum_probs=65.0
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|++.|- -...+..++.+.++++.. .+||+
T Consensus 174 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--------qP~~~~~~~~~~~l~~~~--~iPia 243 (370)
T 1chr_A 174 DLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIE--------QPVGRENTQALRRLSDNN--RVAIM 243 (370)
T ss_dssp HHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEEE--------CCSCTTCHHHHHHHHHHS--CSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--------CCCCcccHHHHHHHHhhC--CCCEE
Confidence 456789999987 378888752 344443 456666766653 112234567788888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++.-+.+..|+.+++..| +|.|++--
T Consensus 244 ~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 244 ADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp ESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 999999999999999987 89999864
No 373
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=93.62 E-value=3.7 Score=38.13 Aligned_cols=180 Identities=13% Similarity=0.103 Sum_probs=104.1
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~~ 141 (371)
|.++.|+ -.+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.+...- ..+.+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 4455666 33334444445777777788986554 2 23445665532 12 22 45666654 3466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+- -| + ..-..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f~ 119 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV--AGYYN-----------RP---S-----------------------------QEGLYQHFK 119 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCTTT-----------CC---C-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCCC-----------CC---C-----------------------------HHHHHHHHH
Confidence 789999999999999863 33320 00 0 001234466
Q ss_pred HHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 222 WLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
.|.+.+++||++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..+++..| .+|.
T Consensus 120 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds~----------gd~~~~~~~~~~~~~~f~v-~~G~-- 186 (297)
T 2rfg_A 120 MVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVKDAT----------TDLARISRERMLINKPFSF-LSGD-- 186 (297)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECS----------CCTTHHHHHHTTCCSCCEE-EESC--
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCEEE-EeCc--
Confidence 777778999998764 4677777776532 33333322 1122344444444334544 3442
Q ss_pred CHHHHHHHHHcCCCEEEEchhHH
Q 017434 294 RGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 187 -d~~~l~~l~~G~~G~is~~an~ 208 (297)
T 2rfg_A 187 -DMTAIAYNASGGQGCISVSANI 208 (297)
T ss_dssp -GGGHHHHHHTTCCEEEESGGGT
T ss_pred -HHHHHHHHHCCCCEEEecHHHh
Confidence 2447788999999999988643
No 374
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=93.61 E-value=1.1 Score=43.24 Aligned_cols=89 Identities=11% Similarity=0.031 Sum_probs=65.0
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+..- .+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||+
T Consensus 177 d~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~ipIa 246 (377)
T 3my9_A 177 ELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQ--------PVPRRHLDAMAGFAAAL--DTPIL 246 (377)
T ss_dssp HHHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEEC--------CCCccCHHHHHHHHHhC--CCCEE
Confidence 356788888887 578887742 33333 55666778877741 12233577888888876 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++..+.+..|+.+++..| +|.|++--.
T Consensus 247 ~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 274 (377)
T 3my9_A 247 ADESCFDAVDLMEVVRRQAADAISVKIM 274 (377)
T ss_dssp ESTTCSSHHHHHHHHHHTCCSEEECCHH
T ss_pred ECCccCCHHHHHHHHHcCCCCEEEeccc
Confidence 999999999999999987 888887543
No 375
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.61 E-value=4.6 Score=37.56 Aligned_cols=183 Identities=17% Similarity=0.222 Sum_probs=107.1
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|-++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 17 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ 95 (301)
T 1xky_A 17 ATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHA 95 (301)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred EEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHH
Confidence 34556666433333444445777777788986543 32 2345555532 12 22 45666653 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+- -| + ..-..+..
T Consensus 96 ai~la~~A~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f 130 (301)
T 1xky_A 96 SIDLTKKATEVGVDAVMLV--APYYN-----------KP---S-----------------------------QEGMYQHF 130 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEc--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7889999999999999874 23320 00 0 00123446
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+.|.+.+++||++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..+++..| .+|.
T Consensus 131 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v-~~G~- 198 (301)
T 1xky_A 131 KAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIKDAG----------GDVLTMTEIIEKTADDFAV-YSGD- 198 (301)
T ss_dssp HHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECS----------SCHHHHHHHHHHSCTTCEE-EESS-
T ss_pred HHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHhcCCCeEE-EECc-
Confidence 6777778999998764 4677777776532 33333322 1344555666655445555 3442
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
...++.++.+|++++.-+..-++
T Consensus 199 --d~~~l~~l~~G~~G~is~~an~~ 221 (301)
T 1xky_A 199 --DGLTLPAMAVGAKGIVSVASHVI 221 (301)
T ss_dssp --GGGHHHHHHTTCCEEEESTHHHH
T ss_pred --HHHHHHHHHcCCCEEEcCHHHhC
Confidence 34578889999999999886543
No 376
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=93.60 E-value=0.32 Score=44.50 Aligned_cols=74 Identities=24% Similarity=0.233 Sum_probs=54.4
Q ss_pred ccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe-----cCCCCH--------HHHHHHH
Q 017434 236 VLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD-----GGVRRG--------TDVFKAL 302 (371)
Q Consensus 236 v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~-----GGI~~~--------~dv~kal 302 (371)
+.+.+++..|.+.|||.|-+-.. -...+-.|++..+..+++.+ ++||.+. |++... +|+..+.
T Consensus 8 ~~s~~~a~~A~~~GAdRIELc~~--L~~GGlTPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~ 83 (256)
T 1twd_A 8 CYSMECALTAQQNGADRVELCAA--PKEGGLTPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVR 83 (256)
T ss_dssp ESSHHHHHHHHHTTCSEEEECBC--GGGTCBCCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCCEEEEcCC--cccCCCCCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 37899999999999999998542 01112246777888888877 6888773 444433 3777788
Q ss_pred HcCCCEEEEch
Q 017434 303 ALGASGVFVGR 313 (371)
Q Consensus 303 ~lGAd~V~iGr 313 (371)
.+|||+|.+|-
T Consensus 84 ~~GadGvV~G~ 94 (256)
T 1twd_A 84 ELGFPGLVTGV 94 (256)
T ss_dssp HTTCSEEEECC
T ss_pred HcCCCEEEEee
Confidence 89999999994
No 377
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=93.59 E-value=5.1 Score=38.04 Aligned_cols=181 Identities=17% Similarity=0.168 Sum_probs=105.4
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+++-..+.|+...+ +| +.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 46667777433333444445777777788875433 33 2345655532 12 22 45666654 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+- -| + ..-..+..
T Consensus 115 ai~la~~A~~~Gadavlv~--~P~Y~-----------~~---s-----------------------------~~~l~~~f 149 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVI--NPYYW-----------KV---S-----------------------------EANLIRYF 149 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCSSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7789999999999999874 33320 00 0 00123446
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHH-Hh-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc---CCCcEEE
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVFL 288 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~-~~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~via 288 (371)
+.|.+.+++||++=.+ .+++...++. +. .+-+|+-+. .++..+.++.+..+ ++..|+
T Consensus 150 ~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgiKdss----------gd~~~~~~l~~~~~~~~~~f~v~- 218 (343)
T 2v9d_A 150 EQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTI----------DSVAHLRSMIHTVKGAHPHFTVL- 218 (343)
T ss_dssp HHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEEEECC----------SCHHHHHHHHHHHHHHCTTCEEE-
T ss_pred HHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCCCEEEE-
Confidence 6777778999998764 4677777776 43 233343321 12344445554443 355554
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 289 DGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
+| +...++.++.+|++++.-+..-
T Consensus 219 ~G---~D~~~l~~l~~Ga~G~is~~an 242 (343)
T 2v9d_A 219 CG---YDDHLFNTLLLGGDGAISASGN 242 (343)
T ss_dssp ES---SGGGHHHHHHTTCCEECCGGGT
T ss_pred EC---cHHHHHHHHHCCCCEEEeCHHH
Confidence 44 2345788999999999988753
No 378
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=93.58 E-value=0.11 Score=47.31 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=43.5
Q ss_pred HHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH----------HHHHHHHcCCCEEEEchh
Q 017434 245 AIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT----------DVFKALALGASGVFVGRP 314 (371)
Q Consensus 245 a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~----------dv~kal~lGAd~V~iGr~ 314 (371)
..+.|.++++.+. .+ +.++++..+ +.+++.+|||+... .+.+++..|||.+.+||+
T Consensus 158 ~~~~G~~g~V~~~------------~e-i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 223 (245)
T 1eix_A 158 TQKCGLDGVVCSA------------QE-AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRP 223 (245)
T ss_dssp HHHTTCSEEECCG------------GG-HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHH
T ss_pred HHHcCCCeEEeCH------------HH-HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHH
Confidence 5678888876532 23 566666664 46899999998431 477788899999999999
Q ss_pred HHH
Q 017434 315 VPF 317 (371)
Q Consensus 315 ~l~ 317 (371)
++.
T Consensus 224 I~~ 226 (245)
T 1eix_A 224 VTQ 226 (245)
T ss_dssp HHT
T ss_pred HcC
Confidence 875
No 379
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=93.53 E-value=0.54 Score=45.26 Aligned_cols=41 Identities=20% Similarity=0.050 Sum_probs=35.7
Q ss_pred CHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhC-CCEEEEe
Q 017434 216 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~G-ad~I~vs 256 (371)
.++.++++|+.+++||+.-+..++++++.+++.| +|+|.+.
T Consensus 282 ~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 282 SEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred cHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEEC
Confidence 4677899999999999988766999999999998 9999883
No 380
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.50 E-value=4.7 Score=37.29 Aligned_cols=181 Identities=19% Similarity=0.185 Sum_probs=106.9
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~~ 141 (371)
|-++.|+.-.+-.+.++-..+.+-.-+.|+...+ +| +.+.+.+|-. +. .+ .|.+...- ..+.+..
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4556776433334444445777777788886444 32 2344665532 22 22 45666654 3466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+. -| + .+-..+..+
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y~-----------~~---~-----------------------------~~~l~~~f~ 120 (291)
T 3tak_A 86 IELTKAAKDLGADAALLV--TPYYN-----------KP---T-----------------------------QEGLYQHYK 120 (291)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCCC-----------CC---C-----------------------------HHHHHHHHH
Confidence 889999999999999864 33320 00 0 000234567
Q ss_pred HHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 222 WLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
.+.+.+++|+++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..+++..|+ +|.
T Consensus 121 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ss----------gd~~~~~~~~~~~~~~f~v~-~G~-- 187 (291)
T 3tak_A 121 AIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDAT----------GDVPRGKALIDALNGKMAVY-SGD-- 187 (291)
T ss_dssp HHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHHTTSSEEE-ECC--
T ss_pred HHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEEE-ECc--
Confidence 777788999998864 4677777766432 22333221 13445556656555556654 342
Q ss_pred CHHHHHHHHHcCCCEEEEchhHH
Q 017434 294 RGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 188 -d~~~~~~l~~G~~G~is~~~n~ 209 (291)
T 3tak_A 188 -DETAWELMLLGADGNISVTANI 209 (291)
T ss_dssp -HHHHHHHHHTTCCEEEESGGGT
T ss_pred -HHHHHHHHHCCCCEEEechhhh
Confidence 4557788999999999887543
No 381
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=93.50 E-value=0.75 Score=44.03 Aligned_cols=116 Identities=13% Similarity=0.157 Sum_probs=78.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+.+.+.+.++++.+.||+++-+.++ +..
T Consensus 140 ~~~~~~~~~a~~~~~~G~~~iKik~~---------------------------------------------------~~~ 168 (369)
T 2zc8_A 140 PSVEDTLRVVERHLEEGYRRIKLKIK---------------------------------------------------PGW 168 (369)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB---------------------------------------------------TTB
T ss_pred CCHHHHHHHHHHHHHhhhheeeeecC---------------------------------------------------hhH
Confidence 36777777778888899998876431 112
Q ss_pred CHHHHHHHHhhc-CCCEEEEEc--cCHHH---HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017434 216 NWKDVKWLQTIT-SLPILVKGV--LTAED---ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 289 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~v--~~~e~---a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~ 289 (371)
+.+.++.+|+.+ +.++.+-.- .+.++ ++.+.+.|++.|- -...+..++.+.++++.. .+||+++
T Consensus 169 d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~ipIa~d 238 (369)
T 2zc8_A 169 DYEVLKAVREAFPEATLTADANSAYSLANLAQLKRLDELRLDYIE--------QPLAYDDLLDHAKLQREL--STPICLD 238 (369)
T ss_dssp SHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHGGGGGCCSCEE--------CCSCTTCSHHHHHHHHHC--SSCEEES
T ss_pred HHHHHHHHHHHcCCCeEEEecCCCCCHHHHHHHHHHHhCCCcEEE--------CCCCcccHHHHHHHHhhC--CCCEEEc
Confidence 346677777766 566766531 23333 3334456766664 111233567778888776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEc
Q 017434 290 GGVRRGTDVFKALALG-ASGVFVG 312 (371)
Q Consensus 290 GGI~~~~dv~kal~lG-Ad~V~iG 312 (371)
..+.+..|+.+++..| +|.|++-
T Consensus 239 E~~~~~~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 239 ESLTGAEKARKAIELGAGRVFNVK 262 (369)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred CccCCHHHHHHHHHhCCCCEEEEc
Confidence 9999999999999988 8999984
No 382
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=93.49 E-value=5 Score=37.57 Aligned_cols=182 Identities=18% Similarity=0.144 Sum_probs=109.6
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------ccCC--CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~~~--~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +... -|.+...- ..+.+.
T Consensus 12 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~ 90 (311)
T 3h5d_A 12 ITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRD 90 (311)
T ss_dssp EEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHH
T ss_pred EEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 45567777544445555556788888888975433 32 2345555532 2222 46666653 346677
Q ss_pred HHHHHHHHHHcCC-cEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHH
Q 017434 141 DAQLVKRAERAGF-KAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 219 (371)
Q Consensus 141 ~~~~~~~a~~aG~-~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (371)
..++.+.|+++|+ +++.+. .|.+- -| + ..-..+.
T Consensus 91 ai~la~~A~~~Ga~davlv~--~P~y~-----------~~---s-----------------------------~~~l~~~ 125 (311)
T 3h5d_A 91 SIEFVKEVAEFGGFAAGLAI--VPYYN-----------KP---S-----------------------------QEGMYQH 125 (311)
T ss_dssp HHHHHHHHHHSCCCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEc--CCCCC-----------CC---C-----------------------------HHHHHHH
Confidence 7889999999997 998764 23320 00 0 0012345
Q ss_pred HHHHHhhcCCCEEEEEc-------cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 220 VKWLQTITSLPILVKGV-------LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
.+.+.+.+++|+++=.+ .+++...++.+.. ..+-+ .+.. ++..+.++.+..+++..|+. |.
T Consensus 126 f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgi-------Kdss--d~~~~~~~~~~~~~~f~v~~-G~- 193 (311)
T 3h5d_A 126 FKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHP-NIIGV-------KECT--SLANMAYLIEHKPEEFLIYT-GE- 193 (311)
T ss_dssp HHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTST-TEEEE-------EECS--CHHHHHHHHHHCCSSCEEEE-CC-
T ss_pred HHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCC-CEEEE-------EeCC--CHHHHHHHHHHcCCCEEEEE-Cc-
Confidence 67777778999998864 5677777776642 22212 1222 45556666666654555543 42
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 194 --d~~~l~~l~~Ga~G~is~~an~ 215 (311)
T 3h5d_A 194 --DGDAFHAMNLGADGVISVASHT 215 (311)
T ss_dssp --GGGHHHHHHHTCCEEEESTHHH
T ss_pred --HHHHHHHHHcCCCEEEechhhh
Confidence 3447788999999999988644
No 383
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=93.48 E-value=0.39 Score=47.22 Aligned_cols=153 Identities=12% Similarity=0.058 Sum_probs=92.0
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.||+++-+.++.|.... .++.+.. ... .+ .......+. .......+..
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~-------~~g~~~~--~~~---~~---~~~~~~p~~-~~~d~~~~~~ 210 (424)
T 3v3w_A 147 GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAK-------TYGVSTN--TKS---YE---PADADLPSV-EVWSTEKYLN 210 (424)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC-------CTTCC----------CC---SCCBSSCCE-EEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCccccc-------ccccccc--ccc---cc---ccccccccc-ccccchhHHH
Confidence 357788888888888899999998887542100 0000000 000 00 000000000 0000000012
Q ss_pred CCHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 286 (371)
...+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||
T Consensus 211 ~d~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI 280 (424)
T 3v3w_A 211 YIPDVFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMED--------AVPAENQESFKLIRQHT--TTPL 280 (424)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCCSSTTHHHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCChHhHHHHHHHHhhC--CCCE
Confidence 2457789999987 578888753 466664 4566778887741 11123456778888877 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++++.+.+..|+.++++.| +|.|++--
T Consensus 281 a~dE~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 281 AVGEVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EEccCcCCHHHHHHHHHcCCCCeEeecc
Confidence 9999999999999999988 89998864
No 384
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.47 E-value=0.2 Score=50.61 Aligned_cols=247 Identities=13% Similarity=0.104 Sum_probs=134.8
Q ss_pred ccccceeecccc-CCCCCCccceeec-CcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEecCCCCCCHHHH--
Q 017434 45 AFSRILFRPRIL-RDVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV-- 120 (371)
Q Consensus 45 ~~~~~~l~pr~l-~~~~~~d~s~~i~-G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~s~~~~~~~eei-- 120 (371)
.||++.|+|..- ...+++|++|.+- +..+..|++-|||...+ |..+|.+..+.|...++.. +.++++.
T Consensus 36 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvT------e~~lAia~a~~GgiGvIh~--~~~~~~q~~ 107 (511)
T 3usb_A 36 TFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVT------EADMAIAMARQGGLGIIHK--NMSIEQQAE 107 (511)
T ss_dssp CGGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHH
T ss_pred ceEEEEEECCcccccccceEeeeEeecccccCCCccccCchhhc------HHHHHHHHHhcCCceeecc--cCCHHHHHH
Confidence 699999999753 2346789998874 57889999999997554 6678888888888777743 4455432
Q ss_pred -----hccC----CCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecC----CCCCcchhHHhhhhcCCCCccccccc
Q 017434 121 -----SSTG----PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVD----TPRLGRREADIKNRFVLPPHLTLKNY 187 (371)
Q Consensus 121 -----~~~~----~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd----~p~~g~r~~d~~~~~~~p~~~~~~~~ 187 (371)
.... +.+.+ + .....+.+.++...+.++..+-|.=+ ..+.-...+|++.... .......+
T Consensus 108 ~V~~V~~~~~~m~~d~v~--l---~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~--~~~~V~~v 180 (511)
T 3usb_A 108 QVDKVKRSESGVISDPFF--L---TPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQD--YSIKISDV 180 (511)
T ss_dssp HHHHHHTSSSCSSSSCCC--B---CTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCC--SSSBHHHH
T ss_pred HHHHhhccccccccCCEE--E---CCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhcc--CCCcHHHh
Confidence 2221 12222 2 22234456777777888888877522 1111122344432100 00000000
Q ss_pred ccc-ccCCCCC-CCcchhhhHhhhh-------cc--c----CCCHHH-HHHHHhh-------cCCCEEEEEccC---HHH
Q 017434 188 EGL-YIGKMDK-TDDSGLASYVANQ-------ID--R----SLNWKD-VKWLQTI-------TSLPILVKGVLT---AED 241 (371)
Q Consensus 188 ~~~-~~~~~~~-~~~~~~~~~~~~~-------~~--~----~~~~~~-i~~ir~~-------~~~pv~vK~v~~---~e~ 241 (371)
..- ......+ .....+.+.+... .| . -.+.++ ++.+... ..+++.+....+ .+.
T Consensus 181 M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~er 260 (511)
T 3usb_A 181 MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTR 260 (511)
T ss_dssp CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHH
T ss_pred cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHH
Confidence 000 0000000 0000000111000 00 0 012333 3333321 123333333222 466
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
++.+.++|+|.|.+....+ .....++.+.++++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 261 a~aLveaGvd~I~Id~a~g----~~~~v~~~i~~i~~~~~-~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 261 IDALVKASVDAIVLDTAHG----HSQGVIDKVKEVRAKYP-SLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhhccceEEeccccc----chhhhhhHHHHHHHhCC-CceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 7889999999999964322 12345677888888763 477775 78999999999999999999874
No 385
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=93.43 E-value=0.38 Score=47.70 Aligned_cols=102 Identities=20% Similarity=0.263 Sum_probs=66.8
Q ss_pred Cc-eEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhh
Q 017434 126 GI-RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 204 (371)
Q Consensus 126 ~~-~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (371)
.| .++.+-+..+.+.+.++++.++++|+++|+++-.+. .|. ++. .+.. .....++.
T Consensus 297 ~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~---~~~-d~~------------~~~~------~~GGlSG~- 353 (443)
T 1tv5_A 297 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DIK------------SFEN------KKGGVSGA- 353 (443)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBS---CCC-CCG------------GGTT------CCSEEEEH-
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCc---ccc-ccc------------cccc------ccCCcCCC-
Confidence 36 788887655666778899999999999998863321 010 000 0000 00000110
Q ss_pred hHhhhhcccCCCHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 205 SYVANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
.+ .+..++.++++++.+ ++||+.-+ +.+.+||..++++|||+|.+.
T Consensus 354 -~~-----~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 354 -KL-----KDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp -HH-----HHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEES
T ss_pred -cc-----hHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 00 123578899999998 89988654 689999999999999999884
No 386
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=93.43 E-value=1.5 Score=40.81 Aligned_cols=168 Identities=16% Similarity=0.126 Sum_probs=95.6
Q ss_pred hHhHHHHHHHHHcCC--cEEecCCCCCCHHHHhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcch
Q 017434 91 EGECATARAASAAGT--IMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRR 168 (371)
Q Consensus 91 ~~e~~~a~aa~~~G~--~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r 168 (371)
+.|........+..+ +-.++.+...+.+++.+..+.. .|-+....+.+.+++++|.+.|+.+++++. ..-..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~IDhT---lL~p~~T~~dI~~lc~eA~~~g~aaVCV~P---~~V~~ 100 (288)
T 3oa3_A 27 NEEWDLLISGKKATLQYPIPLLCYPAPEVVSIAQIIDHT---QLSLSATGSQIDVLCAEAKEYGFATVCVRP---DYVSR 100 (288)
T ss_dssp HHHHHHHHHHHHTTSCSSCCCSCSCCCCGGGGGGGEEEE---CCCTTCCHHHHHHHHHHHHHHTCSEEEECG---GGHHH
T ss_pred cHHHHHHHHHHHHhcCCccccccCCCCCHHHHHHhcCcc---cCCCCCCHHHHHHHHHHHHhcCCcEEEECH---HHHHH
Confidence 345544444444444 3444444444566776654311 144456678889999999999999999852 21111
Q ss_pred hHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-----cC----H
Q 017434 169 EADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-----LT----A 239 (371)
Q Consensus 169 ~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-----~~----~ 239 (371)
.++ .+ +..+++|..-.. .+ .
T Consensus 101 a~~--------------------------------------------------~L-~~s~V~V~tVigFP~G~~~~~~Kv 129 (288)
T 3oa3_A 101 AVQ--------------------------------------------------YL-QGTQVGVTCVIGFHEGTYSTDQKV 129 (288)
T ss_dssp HHH--------------------------------------------------HT-TTSSCEEEEEESTTTSCSCHHHHH
T ss_pred HHH--------------------------------------------------Hc-CCCCCeEEEEeCCCCCCCcHHHHH
Confidence 100 00 111222211110 11 3
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCC-ccchHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHHHH----HcCCCEEEEch
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDY-VPATVMALEEVVQAAKGR-VPVFLDGGVRRGTDVFKAL----ALGASGVFVGR 313 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~-~~~~~~~l~~i~~~~~~~-i~via~GGI~~~~dv~kal----~lGAd~V~iGr 313 (371)
.+++.+++.|||-|.+.-.-|...++ ...-.+.+..++++++.. +.||..-|.-+.+++.++- ++|||+|-..+
T Consensus 130 ~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST 209 (288)
T 3oa3_A 130 SEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTST 209 (288)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCC
Confidence 57888999999999975321111111 122345567777776432 7889888888888866543 47999998876
Q ss_pred hH
Q 017434 314 PV 315 (371)
Q Consensus 314 ~~ 315 (371)
-|
T Consensus 210 Gf 211 (288)
T 3oa3_A 210 GF 211 (288)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 387
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.40 E-value=0.91 Score=43.47 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=61.3
Q ss_pred CCHHH---HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017434 215 LNWKD---VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 215 ~~~~~---i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
+.|+. +...++..+++++ =.+++.+.+..+.+.|+|.+.|... -...+..|..+.+ ...|||.+-|
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~-st~fD~~svd~l~~~~v~~~KI~S~-------~~~N~pLL~~va~---~gKPviLstG 143 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAI-CTPFDEESVDLIEAHGIEIIKIASC-------SFTDWPLLERIAR---SDKPVVASTA 143 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEE-EEECSHHHHHHHHHTTCCEEEECSS-------STTCHHHHHHHHT---SCSCEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEE-eccCCHHHHHHHHHcCCCEEEECcc-------cccCHHHHHHHHh---hCCcEEEECC
Confidence 44544 5555556688876 4557889999999999999999542 1235566766654 2689999999
Q ss_pred CCCHHHHHHHHH----cCCCEEE
Q 017434 292 VRRGTDVFKALA----LGASGVF 310 (371)
Q Consensus 292 I~~~~dv~kal~----lGAd~V~ 310 (371)
..|-+++..++. .|.+.+.
T Consensus 144 mstl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 144 GARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp TCCHHHHHHHHHHHHTTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE
Confidence 999999988866 3666333
No 388
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=93.38 E-value=5 Score=37.29 Aligned_cols=180 Identities=16% Similarity=0.155 Sum_probs=108.3
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC--CceEEEEeecCChH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP--GIRFFQLYVTKHRN 139 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~--~~~~~QLy~~~d~~ 139 (371)
.|.++.|+ -.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ -|.+...- ..+.+
T Consensus 13 ~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~ 90 (301)
T 3m5v_A 13 MTALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATH 90 (301)
T ss_dssp EEECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHH
T ss_pred eEeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHH
Confidence 35556676 34434444455777777788986554 22 2344555532 22 22 35666653 34667
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHH
Q 017434 140 VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 219 (371)
Q Consensus 140 ~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (371)
...++.+.|+++|++++.+. .|.+. -| + ..-..+.
T Consensus 91 ~ai~la~~a~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~ 125 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSV--APYYN-----------KP---T-----------------------------QQGLYEH 125 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEc--CCCCC-----------CC---C-----------------------------HHHHHHH
Confidence 77889999999999999874 33320 00 0 0012345
Q ss_pred HHHHHhhcCCCEEEEEc-------cCHHHHHHHHHh--CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017434 220 VKWLQTITSLPILVKGV-------LTAEDASLAIQY--GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~--Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~G 290 (371)
.+.|.+.+++||++=.+ .+++...++.+. .+-+|+-+. .++..+.++.+.. ++..|+ +|
T Consensus 126 f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdss----------gd~~~~~~~~~~~-~~f~v~-~G 193 (301)
T 3m5v_A 126 YKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEAS----------GNIDKCVDLLAHE-PRMMLI-SG 193 (301)
T ss_dssp HHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------SCHHHHHHHHHHC-TTSEEE-EC
T ss_pred HHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHhC-CCeEEE-Ec
Confidence 67777788999998764 567887777765 344444332 1344455565555 456554 44
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 291 GVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 291 GI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
. ...++.++.+|++++.-+..-+
T Consensus 194 ~---d~~~~~~l~~G~~G~is~~~n~ 216 (301)
T 3m5v_A 194 E---DAINYPILSNGGKGVISVTSNL 216 (301)
T ss_dssp C---GGGHHHHHHTTCCEEEESGGGT
T ss_pred c---HHHHHHHHHcCCCEEEehHHHh
Confidence 2 3447788999999999887543
No 389
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.36 E-value=3.1 Score=38.48 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=0.0
Q ss_pred hHHHHHHHHHcCCcEEecCCC------------CCCHHH-------HhccCCCceEEEEeecC-----ChHHHHHHHHHH
Q 017434 93 ECATARAASAAGTIMTLSSWA------------TSSVEE-------VSSTGPGIRFFQLYVTK-----HRNVDAQLVKRA 148 (371)
Q Consensus 93 e~~~a~aa~~~G~~~~~s~~~------------~~~~ee-------i~~~~~~~~~~QLy~~~-----d~~~~~~~~~~a 148 (371)
|...|+.+.++|+.++++.-| ..+++| |++..+.++.+ .-.+. +++...+-..|.
T Consensus 43 Da~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~s~~~a~~na~rl 121 (281)
T 1oy0_A 43 DYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVV-ADLPFGSYEAGPTAALAAATRF 121 (281)
T ss_dssp SHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EECCTTSSTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EECCCCcccCCHHHHHHHHHHH
Q ss_pred HH-cCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHHHhhc
Q 017434 149 ER-AGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT 227 (371)
Q Consensus 149 ~~-aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ir~~~ 227 (371)
-+ +|+.++-+ -+.....+.|+.+.+.
T Consensus 122 ~~eaGa~aVkl----------------------------------------------------Edg~e~~~~I~al~~a- 148 (281)
T 1oy0_A 122 LKDGGAHAVKL----------------------------------------------------EGGERVAEQIACLTAA- 148 (281)
T ss_dssp HHTTCCSEEEE----------------------------------------------------EBSGGGHHHHHHHHHH-
T ss_pred HHHhCCeEEEE----------------------------------------------------CCcHHHHHHHHHHHHC-
Q ss_pred CCCEE---------------EEEc-------cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCc
Q 017434 228 SLPIL---------------VKGV-------LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 228 ~~pv~---------------vK~v-------~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 285 (371)
++||+ .|.. ...++|+.+.++|||.|.+ -+.+. +...++.+.+ ++|
T Consensus 149 gIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivl---------E~vp~-~~a~~it~~l--~iP 216 (281)
T 1oy0_A 149 GIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVM---------EMVPA-ELATQITGKL--TIP 216 (281)
T ss_dssp TCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEE---------ESCCH-HHHHHHHHHC--SSC
T ss_pred CCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEE---------ecCCH-HHHHHHHHhC--CCC
Q ss_pred EEEecC
Q 017434 286 VFLDGG 291 (371)
Q Consensus 286 via~GG 291 (371)
+|.-|.
T Consensus 217 ~igIGa 222 (281)
T 1oy0_A 217 TVGIGA 222 (281)
T ss_dssp EEEESS
T ss_pred EEEeCC
No 390
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=93.34 E-value=1.3 Score=42.86 Aligned_cols=119 Identities=12% Similarity=0.048 Sum_probs=83.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.|++++-+.+++ ++..
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~-------------------------------------------------~~~~ 171 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGK-------------------------------------------------NLDA 171 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCC-------------------------------------------------CHHH
Confidence 456677777777778899998776532 0112
Q ss_pred CHHHHHHHHhhc--CCCEE-EEE--ccCHHHH----HHHHHhCC--CEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCC
Q 017434 216 NWKDVKWLQTIT--SLPIL-VKG--VLTAEDA----SLAIQYGA--AGIIVSNHGARQLDYVPATVMALEEVVQAAKGRV 284 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~-vK~--v~~~e~a----~~a~~~Ga--d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i 284 (371)
+.+.++.+|+.+ +.++. +.. ..++++| +.+.+.|+ +.|- -...+..++.+.++++.. .+
T Consensus 172 d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iE--------qP~~~~d~~~~~~l~~~~--~i 241 (391)
T 3gd6_A 172 DEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIE--------SPAPRNDFDGLYQLRLKT--DY 241 (391)
T ss_dssp HHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEE--------CCSCTTCHHHHHHHHHHC--SS
T ss_pred HHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceec--------CCCChhhHHHHHHHHHHc--CC
Confidence 356788888886 56777 764 2466664 44556677 6553 111233577888888877 69
Q ss_pred cEEEecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 285 PVFLDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 285 ~via~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
|| +..+.+..|+.+++..| +|.|++--..
T Consensus 242 PI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 271 (391)
T 3gd6_A 242 PI--SEHVWSFKQQQEMIKKDAIDIFNISPVF 271 (391)
T ss_dssp CE--EEECCCHHHHHHHHHHTCCSEEEECHHH
T ss_pred Cc--CCCCCCHHHHHHHHHcCCCCEEEECchh
Confidence 99 88999999999999987 8999987644
No 391
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=93.34 E-value=0.15 Score=46.82 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=35.6
Q ss_pred CHHHHHHHHh-hcC-CCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQT-ITS-LPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~-~~~-~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
+.+.++.+++ ..+ +||++-+ +.+++|+..++++|+|+|.|..
T Consensus 164 ~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 164 TRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp THHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 4566899998 667 9999875 6899999999999999999853
No 392
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.33 E-value=3.2 Score=38.46 Aligned_cols=181 Identities=14% Similarity=0.122 Sum_probs=104.8
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+ .+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 7 ~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ 84 (291)
T 3a5f_A 7 GVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAA 84 (291)
T ss_dssp EEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred eeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 355667775445 5666556777777888986543 3 23445665532 12 22 45666654 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+.+ | + ..-..+..
T Consensus 85 ai~la~~a~~~Gadavlv~--~P~y~~-----------~---s-----------------------------~~~l~~~f 119 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVI--TPYYNK-----------T---T-----------------------------QKGLVKHF 119 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSSC-----------C---C-----------------------------HHHHHHHC
T ss_pred HHHHHHHHHhcCCCEEEEc--CCCCCC-----------C---C-----------------------------HHHHHHHH
Confidence 7789999999999999874 343200 0 0 00012233
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+.|.+.+++|+++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..+++..| .+|.
T Consensus 120 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s~----------gd~~~~~~~~~~~~~~f~v-~~G~- 187 (291)
T 3a5f_A 120 KAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCEDKNIVAVXEAS----------GNISQIAQIKALCGDKLDI-YSGN- 187 (291)
T ss_dssp -CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHHGGGSEE-EESC-
T ss_pred HHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEeCCC----------CCHHHHHHHHHhcCCCeEE-EeCc-
Confidence 4455667899988764 4677777665532 22333221 1244455555555434555 3442
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
-..++.++.+|++++.-+..-+
T Consensus 188 --d~~~~~~l~~G~~G~is~~an~ 209 (291)
T 3a5f_A 188 --DDQIIPILALGGIGVISVLANV 209 (291)
T ss_dssp --GGGHHHHHHTTCCEEEESGGGT
T ss_pred --HHHHHHHHHCCCCEEEecHHHh
Confidence 2447788999999999988543
No 393
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=93.24 E-value=0.85 Score=41.01 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=63.1
Q ss_pred ccCCCHHHHHHHHhhcCCCEEEEEc--c----C-HHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh
Q 017434 212 DRSLNWKDVKWLQTITSLPILVKGV--L----T-AEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA 280 (371)
Q Consensus 212 ~~~~~~~~i~~ir~~~~~pv~vK~v--~----~-~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~ 280 (371)
+.+.+.+.++.+++.+++|++ |-+ . . .+++ ..+.+..+|++.+...||+. ..-.|+.+..+..
T Consensus 99 HG~E~~~~~~~l~~~~~~~vi-Ka~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG---~~fDW~~~~~~~~-- 172 (228)
T 4aaj_A 99 HSNALPQTIDTLKKEFGVFVM-KAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSG---KLHDLRVSSLVAR-- 172 (228)
T ss_dssp CSCCCHHHHHHHHHHHCCEEE-EEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHH--
T ss_pred ccccCHHHHHHHhhccCceEE-EEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCc---CcCChHHHHHhhh--
Confidence 445567889999998898876 643 1 1 2333 33445679999998776641 1123445554433
Q ss_pred cCCCcEEEecCCCCHHHHHHHHH-cCCCEEEEchhH
Q 017434 281 KGRVPVFLDGGVRRGTDVFKALA-LGASGVFVGRPV 315 (371)
Q Consensus 281 ~~~i~via~GGI~~~~dv~kal~-lGAd~V~iGr~~ 315 (371)
+.|++..||+. ++++.+++. .+..+|=+.+-+
T Consensus 173 --~~p~iLAGGL~-peNV~~Ai~~~~P~gVDVsSGV 205 (228)
T 4aaj_A 173 --KIPVIVAGGLN-AENVEEVIKVVKPYGVDVSSGV 205 (228)
T ss_dssp --HSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGG
T ss_pred --cCCeEEECCCC-HHHHHHHHHHhCCCEEEeCCCC
Confidence 46999999995 899999998 799999998854
No 394
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=93.17 E-value=3.7 Score=38.02 Aligned_cols=180 Identities=16% Similarity=0.109 Sum_probs=107.3
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|-++.|+.-. -.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 8 ~~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 85 (292)
T 3daq_A 8 GVALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEK 85 (292)
T ss_dssp EEECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred EEeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 35556776433 34444445777777788985543 2 23445666532 22 22 46666653 356777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+. -| + ..-..+..
T Consensus 86 ai~la~~a~~~Gadavlv~--~P~y~-----------~~---~-----------------------------~~~l~~~f 120 (292)
T 3daq_A 86 SIQASIQAKALGADAIMLI--TPYYN-----------KT---N-----------------------------QRGLVKHF 120 (292)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7889999999999999874 33320 00 0 00123456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC-CCcEEEecC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKG-RVPVFLDGG 291 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~-~i~via~GG 291 (371)
+.|.+.+++|+++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+..++ +..|+. |.
T Consensus 121 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ss----------gd~~~~~~~~~~~~~~~f~v~~-G~ 189 (292)
T 3daq_A 121 EAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDAT----------NDFEYLEEVKKRIDTNSFALYS-GN 189 (292)
T ss_dssp HHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECC----------CCHHHHHHHHTTSCTTTSEEEE-SC
T ss_pred HHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHHCCCCCEEEEE-CC
Confidence 6777777999998864 5678877777632 22222221 134555666655544 455543 42
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
.+.++.++.+|++++.-+..-
T Consensus 190 ---d~~~~~~l~~G~~G~is~~~n 210 (292)
T 3daq_A 190 ---DDNVVEYYQRGGQGVISVIAN 210 (292)
T ss_dssp ---GGGHHHHHHTTCCEEEESGGG
T ss_pred ---HHHHHHHHhcCCCEEEeCHHH
Confidence 344788899999999988853
No 395
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.14 E-value=0.23 Score=48.50 Aligned_cols=68 Identities=9% Similarity=0.189 Sum_probs=51.2
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.+.++.+.++|+|.|.+....+. ....++.+..+++.++ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~----~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGH----STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCCCC----hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 45678889999999998321111 1235667777777764 689987 67889999999999999999994
No 396
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=93.14 E-value=0.77 Score=43.85 Aligned_cols=91 Identities=12% Similarity=0.074 Sum_probs=63.5
Q ss_pred CceEEEEee------cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCC
Q 017434 126 GIRFFQLYV------TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 199 (371)
Q Consensus 126 ~~~~~QLy~------~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (371)
-|.++.|-+ ..+.+...+++++++++|++.|.++..... +.. . .
T Consensus 220 ~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~--------------~~~-~------~--------- 269 (349)
T 3hgj_A 220 LPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVV--------------LRV-R------I--------- 269 (349)
T ss_dssp SCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSC--------------SSS-C------C---------
T ss_pred ceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcC--------------ccc-c------c---------
Confidence 457777764 235567778899999999999887642100 000 0 0
Q ss_pred cchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-cCHHHHHHHHHhC-CCEEEEe
Q 017434 200 DSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-~~~e~a~~a~~~G-ad~I~vs 256 (371)
...+...++.++++++.+++||+.-+. .++++++.+++.| +|.|.+.
T Consensus 270 ----------~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 270 ----------PLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp ----------CCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEES
T ss_pred ----------CCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEec
Confidence 001234577889999999999987764 5899999999999 9999883
No 397
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.11 E-value=5.7 Score=37.20 Aligned_cols=181 Identities=14% Similarity=0.103 Sum_probs=110.2
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.++..- ..+.+.
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 46667777533334444445777777888986554 2 23445665532 22 22 46677654 356677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+-+ | + .+-..+..
T Consensus 108 ai~la~~A~~~Gadavlv~--~P~y~~-----------~---s-----------------------------~~~l~~~f 142 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVL--PISYWK-----------L---N-----------------------------EAEVFQHY 142 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCSSC-----------C---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCCC-----------C---C-----------------------------HHHHHHHH
Confidence 7889999999999999873 333200 0 0 00123456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHH-HHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLA-IQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGG 291 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a-~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GG 291 (371)
+.|.+.+++||++=.+ .+++...++ .+.. +-+|+-+. .++..+.++.+..+++..|+. |.
T Consensus 143 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~~-G~ 211 (315)
T 3na8_A 143 RAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKEST----------GDIQRMHKLRLLGEGRVPFYN-GC 211 (315)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEEECS----------SCHHHHHHHHHHTTTCSCEEE-CC
T ss_pred HHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEECCC----------CCHHHHHHHHHHcCCCEEEEe-Cc
Confidence 7777788999998874 467777776 5532 33343321 134555666666655666665 32
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
...++.++.+|++++.-+..-
T Consensus 212 ---D~~~l~~l~~G~~G~is~~an 232 (315)
T 3na8_A 212 ---NPLALEAFVAGAKGWCSAAPN 232 (315)
T ss_dssp ---GGGHHHHHHHTCSEEEESGGG
T ss_pred ---hHHHHHHHHCCCCEEEechhh
Confidence 244678899999999988754
No 398
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=93.10 E-value=1.7 Score=40.42 Aligned_cols=107 Identities=18% Similarity=0.268 Sum_probs=75.7
Q ss_pred cCHHHHHHHH-HhCCCEEEEeC---CCCcCCCCccc--hHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEE
Q 017434 237 LTAEDASLAI-QYGAAGIIVSN---HGARQLDYVPA--TVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGV 309 (371)
Q Consensus 237 ~~~e~a~~a~-~~Gad~I~vs~---~gg~~~~~~~~--~~~~l~~i~~~~~~~i~via~GGI~~-~~dv~kal~lGAd~V 309 (371)
.+|++|+... +.|+|.+-++. ||-+. +.+ .++.|.+|.+.+ ++|+..=||=.. .+++.+++.+|..-|
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~---~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 155 TDPQEAKRFVELTGVDSLAVAIGTAHGLYS---KTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSCCS---SCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEeecCccccCcC---CCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEE
Confidence 5688887765 79999999974 55432 333 678899999988 699999885443 566889999999999
Q ss_pred EEchhHHHhhhc-------CC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017434 310 FVGRPVPFSLAV-------DG-----E-AGVRKVLQMLRDEFELTMALSGCR 348 (371)
Q Consensus 310 ~iGr~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 348 (371)
-+++-+.++... .. + .-+....+.+++.++..|..+|+.
T Consensus 230 Ni~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 230 NVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp EECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEChHHHHHHHHHHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999976543210 11 1 123334466778888888888864
No 399
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.06 E-value=5.8 Score=37.10 Aligned_cols=179 Identities=11% Similarity=0.054 Sum_probs=102.6
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHH-------hccCC-CceEEEEeecCChHHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEV-------SSTGP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei-------~~~~~-~~~~~QLy~~~d~~~~ 141 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|- .+..+ -|.+...- ..+.+..
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~a 91 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAM 91 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHH
Confidence 45566776433334444445777777788986443 2 2344566542 22223 45666653 3566777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.. .| + ..-..+..+
T Consensus 92 i~la~~A~~~Gadavlv~--~P~~------------~~---s-----------------------------~~~l~~~f~ 125 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIA--PPPS------------LR---T-----------------------------DEQITTYFR 125 (313)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCTT------------CC---S-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCC------------CC---C-----------------------------HHHHHHHHH
Confidence 889999999999999873 2321 00 0 001234567
Q ss_pred HHHhhcC--CCEEEEEc-------cCHHHHHHHHHh--CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc----CCCcE
Q 017434 222 WLQTITS--LPILVKGV-------LTAEDASLAIQY--GAAGIIVSNHGARQLDYVPATVMALEEVVQAAK----GRVPV 286 (371)
Q Consensus 222 ~ir~~~~--~pv~vK~v-------~~~e~a~~a~~~--Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~----~~i~v 286 (371)
.|.+.++ +||++=.+ .+++...++.+. .+-+|+-+. ...+..+.++.+..+ ++..|
T Consensus 126 ~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKd~~---------~~~~~~~~~~~~~~~~~~~~~f~v 196 (313)
T 3dz1_A 126 QATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASCVMLKHED---------WPGLEKITTLRGFQKDGSLRPLSI 196 (313)
T ss_dssp HHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSEEEEEECC---------SSCHHHHHHHHHHHHHTSSCCCEE
T ss_pred HHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEcCC---------CCCHHHHHHHHHhcCccCCCCeEE
Confidence 7777777 99998764 567887777642 344444311 123444555555543 35555
Q ss_pred EEecCCCCHHHHHH-HHHcCCCEEEEch
Q 017434 287 FLDGGVRRGTDVFK-ALALGASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~k-al~lGAd~V~iGr 313 (371)
+. |. .+..+. ++.+|++++..|.
T Consensus 197 ~~-G~---d~~~l~~~l~~G~~G~i~~~ 220 (313)
T 3dz1_A 197 LC-GN---GGLFLDFEMERGADGAMTGY 220 (313)
T ss_dssp EE-CG---GGTTHHHHHHHTCCEEEECC
T ss_pred Ee-CC---cHHHHHHHHHCCCcEEEeCc
Confidence 43 31 112344 5899999998775
No 400
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=93.04 E-value=0.59 Score=41.95 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=35.9
Q ss_pred CCHHHHHHHHhhc-----CCCEEEEEccCHHHHHHHHHhCCCEEEEe
Q 017434 215 LNWKDVKWLQTIT-----SLPILVKGVLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 215 ~~~~~i~~ir~~~-----~~pv~vK~v~~~e~a~~a~~~Gad~I~vs 256 (371)
...+.++++|+.. ++|+.+-|..+.+.+..+.++|+|++++.
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvG 201 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAG 201 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEEC
Confidence 3567788888877 79999888778899999999999999985
No 401
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=93.04 E-value=0.46 Score=44.88 Aligned_cols=80 Identities=20% Similarity=0.169 Sum_probs=59.6
Q ss_pred HHHHHHHhhcCCCEEEEEccC--------HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017434 218 KDVKWLQTITSLPILVKGVLT--------AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD 289 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v~~--------~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~ 289 (371)
+.++++++.++.|+.+-...+ .+.++.+.++|+|.|.++. + .+ .+.+..+++. .++++.
T Consensus 57 ~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~--g------~p-~~~~~~l~~~---gi~vi~- 123 (328)
T 2gjl_A 57 AEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAG--N------DP-GEHIAEFRRH---GVKVIH- 123 (328)
T ss_dssp HHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEE--S------CC-HHHHHHHHHT---TCEEEE-
T ss_pred HHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcC--C------Cc-HHHHHHHHHc---CCCEEe-
Confidence 557888887778887776544 2668889999999998853 2 11 3445555442 578885
Q ss_pred cCCCCHHHHHHHHHcCCCEEEE
Q 017434 290 GGVRRGTDVFKALALGASGVFV 311 (371)
Q Consensus 290 GGI~~~~dv~kal~lGAd~V~i 311 (371)
.+.+.+++.++...|+|++.+
T Consensus 124 -~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 124 -KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp -EESSHHHHHHHHHTTCSEEEE
T ss_pred -eCCCHHHHHHHHHcCCCEEEE
Confidence 488999999999999999998
No 402
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=93.00 E-value=0.24 Score=47.44 Aligned_cols=42 Identities=26% Similarity=0.255 Sum_probs=36.2
Q ss_pred CCHHHHHHHHhhc--CCCEEEE-EccCHHHHHHHHHhCCCEEEEe
Q 017434 215 LNWKDVKWLQTIT--SLPILVK-GVLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK-~v~~~e~a~~a~~~Gad~I~vs 256 (371)
..|+.+.++++.+ ++||+.= ++.+.+|+.+++++|||+|.+.
T Consensus 260 ~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 260 TALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEC
Confidence 4678899999998 6898765 4689999999999999999984
No 403
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=92.97 E-value=3 Score=40.19 Aligned_cols=121 Identities=13% Similarity=0.084 Sum_probs=82.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.||+++-+.++. ++..
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~-------------------------------------------------~~~~ 171 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGA-------------------------------------------------DFNR 171 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSS-------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCC-------------------------------------------------CHHH
Confidence 467777777777778899998765431 0112
Q ss_pred CHHHHHHHHhhc--CCCEEEEE--ccCHHHHH----HHHH--hCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCc
Q 017434 216 NWKDVKWLQTIT--SLPILVKG--VLTAEDAS----LAIQ--YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVP 285 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~--v~~~e~a~----~a~~--~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 285 (371)
+.+.++.+|+.+ +.++.+-. ..+.++|. .+.+ .++..|- -...+..++.+.++++.. .+|
T Consensus 172 d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iE--------eP~~~~d~~~~~~l~~~~--~iP 241 (379)
T 3r0u_A 172 DIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIE--------QPVKYYDIKAMAEITKFS--NIP 241 (379)
T ss_dssp HHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEE--------CCSCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEE--------CCCCcccHHHHHHHHhcC--CCC
Confidence 456788999987 36777764 24666653 3444 3444432 112233577888888877 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 286 VFLDGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 286 via~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
|.++..+.+..|+.+++..| +|.|++--..
T Consensus 242 Ia~dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 242 VVADESVFDAKDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp EEESTTCSSHHHHHHHHHTTCCSEEEECHHH
T ss_pred EEeCCccCCHHHHHHHHHcCCCCEEEECccc
Confidence 99999999999999999988 7998885433
No 404
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=92.95 E-value=0.88 Score=41.20 Aligned_cols=76 Identities=14% Similarity=0.080 Sum_probs=52.6
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHH----HHcCCCEEEEch
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKA----LALGASGVFVGR 313 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~-~i~via~GGI~~~~dv~ka----l~lGAd~V~iGr 313 (371)
.+++.|++.|||.|.+.-.-|.-.++. ..-.+.+..+++++++ -++||..-|.-+.+++.++ .++|||+|=..+
T Consensus 99 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTST 178 (239)
T 3ngj_A 99 YETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTST 178 (239)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCC
Confidence 578889999999999753211111111 1133456667777643 3678888888888999988 678999999887
Q ss_pred hH
Q 017434 314 PV 315 (371)
Q Consensus 314 ~~ 315 (371)
-|
T Consensus 179 Gf 180 (239)
T 3ngj_A 179 GF 180 (239)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 405
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=92.94 E-value=0.25 Score=46.64 Aligned_cols=91 Identities=21% Similarity=0.373 Sum_probs=58.0
Q ss_pred HhccCCCceEEEEeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCC
Q 017434 120 VSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 199 (371)
Q Consensus 120 i~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (371)
+.+..+.|.++.+-...+.+...+++++++++|++.|.|+-.+. . .++
T Consensus 121 v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~-----~----~~~----------------------- 168 (318)
T 1vhn_A 121 LRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTV-----V----QSF----------------------- 168 (318)
T ss_dssp HHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCT-----T----TTT-----------------------
T ss_pred HHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCc-----c----ccC-----------------------
Confidence 33334456677765433333333788889999999988752110 0 000
Q ss_pred cchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHH-hCCCEEEEe
Q 017434 200 DSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDASLAIQ-YGAAGIIVS 256 (371)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~-~Gad~I~vs 256 (371)
.+...|+.++++++ ++||+.-| +.+++++..+++ .|+|+|.+.
T Consensus 169 ------------~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 169 ------------TGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp ------------SSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred ------------CCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 01123455666666 89998766 579999999998 799999884
No 406
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=92.94 E-value=0.49 Score=45.58 Aligned_cols=41 Identities=24% Similarity=0.103 Sum_probs=35.5
Q ss_pred CHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhC-CCEEEEe
Q 017434 216 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~G-ad~I~vs 256 (371)
.++.++++++.+++||+.-+..++++++.+++.| +|+|.+.
T Consensus 281 ~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 281 PVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECC
T ss_pred cHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhc
Confidence 4577899999999999987766999999999998 9999873
No 407
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.94 E-value=0.3 Score=46.91 Aligned_cols=66 Identities=18% Similarity=0.172 Sum_probs=48.9
Q ss_pred HHHHHHHh--CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 017434 241 DASLAIQY--GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 241 ~a~~a~~~--Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iG 312 (371)
.++.+.+. |++.|.++...| .....++.+.++++..+ ++||++ |++.+.+|+.++.++|||+|.++
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~g----~~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVANG----YSEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSCT----TBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhccCCCCEEEEEecCC----CcHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 35556666 999988863222 11335677888887763 588885 77889999999999999999875
No 408
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=92.92 E-value=0.14 Score=46.26 Aligned_cols=77 Identities=25% Similarity=0.312 Sum_probs=49.8
Q ss_pred HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH----------HHHHHHcCCCEEEEc
Q 017434 243 SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTD----------VFKALALGASGVFVG 312 (371)
Q Consensus 243 ~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~d----------v~kal~lGAd~V~iG 312 (371)
..+.+.|.++++.+. +.+.++++..+ ..+++.+|||+.... ..+++..|||.+.+|
T Consensus 149 ~~~~~~G~~g~v~~~-------------~~i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvG 214 (239)
T 1dbt_A 149 KQAEESGLDGVVCSV-------------HEAKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVG 214 (239)
T ss_dssp HHHHHTTCSEEECCG-------------GGHHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEEC
T ss_pred HHHHHhCCCEEEECH-------------HHHHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEC
Confidence 334678888876532 23344544443 468999999985433 367889999999999
Q ss_pred hhHHHhhhcCChHHHHHHHHHHHHHHH
Q 017434 313 RPVPFSLAVDGEAGVRKVLQMLRDEFE 339 (371)
Q Consensus 313 r~~l~~~~~~G~~gv~~~l~~l~~el~ 339 (371)
|+++.+ .. ..+.++.+++++.
T Consensus 215 r~I~~a---~d---p~~a~~~l~~~i~ 235 (239)
T 1dbt_A 215 RSITKA---ED---PVKAYKAVRLEWE 235 (239)
T ss_dssp HHHHTS---SC---HHHHHHHHHHHHH
T ss_pred hhhcCC---CC---HHHHHHHHHHHHH
Confidence 998752 12 2345555555543
No 409
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=92.92 E-value=0.57 Score=45.08 Aligned_cols=90 Identities=14% Similarity=0.052 Sum_probs=62.1
Q ss_pred CceEEEEeec-------CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCC
Q 017434 126 GIRFFQLYVT-------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKT 198 (371)
Q Consensus 126 ~~~~~QLy~~-------~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~ 198 (371)
-+.++.|-+. .+.+...++++.++++|++.|.++....... ...|
T Consensus 226 ~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~---------~~~~------------------- 277 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPD---------TNIP------------------- 277 (363)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSC---------CCCC-------------------
T ss_pred ceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccc---------cccC-------------------
Confidence 3577777542 2345667788899999999998865321100 0000
Q ss_pred CcchhhhHhhhhcccCCCHHHHHHHHhhcCCCEEEEEc-cCHHHHHHHHHhC-CCEEEE
Q 017434 199 DDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIV 255 (371)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~i~~ir~~~~~pv~vK~v-~~~e~a~~a~~~G-ad~I~v 255 (371)
..+.+.++.++++|+.+++||+.-+. .++++++.+++.| +|.|.+
T Consensus 278 ------------~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 278 ------------WGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp ------------CCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred ------------CCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 01224567889999999999987764 5799999999999 999977
No 410
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=92.82 E-value=6.3 Score=36.89 Aligned_cols=179 Identities=14% Similarity=0.063 Sum_probs=103.9
Q ss_pred ceeeccc-ccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 76 PIMIAPT-AFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 76 Pi~iAPm-~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
|.++.|+ .-.+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.+...- . +.+.
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG-Y-SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHH
Confidence 4456666 323333444445777777788986554 2 23445665532 12 22 45666663 3 6667
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+- -| + ..-..+..
T Consensus 95 ai~la~~A~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f 129 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIH--QPVHP-----------YI---T-----------------------------DAGAVEYY 129 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCCS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7789999999999999863 34320 00 0 00023446
Q ss_pred HHHHhhcCCCEEEEE---ccCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC--CCcEEEecCCCC
Q 017434 221 KWLQTITSLPILVKG---VLTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKG--RVPVFLDGGVRR 294 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~---v~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~i~via~GGI~~ 294 (371)
+.|.+.+++||++=. +.+++...++.+.. +-+|+-+. .++..+.++.+..++ +..| .+|.
T Consensus 130 ~~va~a~~lPiilYn~tg~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~f~v-~~G~--- 195 (314)
T 3d0c_A 130 RNIIEALDAPSIIYFKDAHLSDDVIKELAPLDKLVGIKYAI----------NDIQRVTQVMRAVPKSSNVAF-ICGT--- 195 (314)
T ss_dssp HHHHHHSSSCEEEEECCTTSCTHHHHHHTTCTTEEEEEECC----------CCHHHHHHHHHHSCGGGCCEE-EETT---
T ss_pred HHHHHhCCCCEEEEeCCCCcCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCCEEE-EEeC---
Confidence 677777899999854 24667776665431 22333321 134455566655543 4544 3442
Q ss_pred HH-HHHHHHHcCCCEEEEchhH
Q 017434 295 GT-DVFKALALGASGVFVGRPV 315 (371)
Q Consensus 295 ~~-dv~kal~lGAd~V~iGr~~ 315 (371)
.. .++.++.+|++++.-+..-
T Consensus 196 d~~~~~~~l~~G~~G~is~~an 217 (314)
T 3d0c_A 196 AEKWAPFFYHAGAVGFTSGLVN 217 (314)
T ss_dssp HHHHHHHHHHHTCCEEEESGGG
T ss_pred cHHHHHHHHHcCCCEEEecHHH
Confidence 34 5788899999999998854
No 411
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=92.81 E-value=2.8 Score=39.01 Aligned_cols=109 Identities=17% Similarity=0.176 Sum_probs=75.0
Q ss_pred cCHHHHHHHH-HhCCCEEEEeC---CCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEE
Q 017434 237 LTAEDASLAI-QYGAAGIIVSN---HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFV 311 (371)
Q Consensus 237 ~~~e~a~~a~-~~Gad~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~-~~dv~kal~lGAd~V~i 311 (371)
.+|++|+... +.|+|.+-++. ||-+.. ...-.++.|.+|.+.+ ++|+..=||=.. .+++.+++.+|..-|-+
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~-~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi 235 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYKG-EPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKINV 235 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCSS-SCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcCC-CCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEEE
Confidence 4688887765 69999999973 554411 1122678899999998 699998886443 46688999999999999
Q ss_pred chhHHHhhhc-------C-----Ch-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017434 312 GRPVPFSLAV-------D-----GE-AGVRKVLQMLRDEFELTMALSGCR 348 (371)
Q Consensus 312 Gr~~l~~~~~-------~-----G~-~gv~~~l~~l~~el~~~m~~~G~~ 348 (371)
++-+.++... . .+ .-+....+.+++.++..|..+|+.
T Consensus 236 ~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 236 NTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9976543210 0 01 123334456677777888888764
No 412
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.79 E-value=0.33 Score=45.12 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=56.2
Q ss_pred cCCCEEEEEccCHHHHHHHHHhCCCEEEEeC--------CCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017434 227 TSLPILVKGVLTAEDASLAIQYGAAGIIVSN--------HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDV 298 (371)
Q Consensus 227 ~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~--------~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv 298 (371)
...|+++ .+...+.++.+.++|+++|.+.. .+|.. .....+.+.++++.+ ++|++...++.+.+++
T Consensus 20 ~~~~~i~-~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~---~~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~~~ 93 (297)
T 2zbt_A 20 FKGGVIM-DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA---RMSDPKIIKEIMAAV--SIPVMAKVRIGHFVEA 93 (297)
T ss_dssp GTTEEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC---CCCCHHHHHHHHTTC--SSCEEEEEETTCHHHH
T ss_pred hhCCeee-eechHHHHHHHHHCCCcEEEeccccchHHHhhcCCc---cCCCHHHHHHHHHhc--CCCeEEEeccCCHHHH
Confidence 4557765 44567889999999999998721 11110 123456677776655 6899998888888899
Q ss_pred HHHHHcCCCEE
Q 017434 299 FKALALGASGV 309 (371)
Q Consensus 299 ~kal~lGAd~V 309 (371)
..++++|||.|
T Consensus 94 ~~~~~aGad~v 104 (297)
T 2zbt_A 94 MILEAIGVDFI 104 (297)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHCCCCEE
Confidence 99999999999
No 413
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=92.74 E-value=0.13 Score=47.62 Aligned_cols=62 Identities=27% Similarity=0.319 Sum_probs=45.6
Q ss_pred CCHHHHHHHHhhcCCCEEE---EEccCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh
Q 017434 215 LNWKDVKWLQTITSLPILV---KGVLTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA 280 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~v---K~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~ 280 (371)
-.|+.|+++++..++||++ .++.+++++..+++.|+|+|.|... ....+.+......+++++
T Consensus 185 ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrA----I~~s~DP~~~Akafv~Av 249 (291)
T 3o07_A 185 VPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSG----IFKSSNPVRLATAVVEAT 249 (291)
T ss_dssp SCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGG----GGGSSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchH----HhCCCCHHHHHHHHHHHH
Confidence 4699999999998999975 5678999999999999999999432 112233444455555554
No 414
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=92.67 E-value=0.2 Score=46.35 Aligned_cols=40 Identities=28% Similarity=0.253 Sum_probs=34.2
Q ss_pred CHHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
..+.++.+|+.+++||++.+ +.++++++.+ .|+|+++|.+
T Consensus 190 ~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 190 VKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 45779999999999999996 4669999997 9999999954
No 415
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=92.67 E-value=0.75 Score=40.37 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=31.6
Q ss_pred HHHHHHHhhc-----CCCEEEEEccCHHHHHHHHHhCCCEEEEe
Q 017434 218 KDVKWLQTIT-----SLPILVKGVLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 218 ~~i~~ir~~~-----~~pv~vK~v~~~e~a~~a~~~Gad~I~vs 256 (371)
+.++++++.. +.|+++-+..+++++..+.++|+|+++|+
T Consensus 155 ~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 155 EKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEEEC
Confidence 5567777655 68888877777888988999999999995
No 416
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=92.61 E-value=0.74 Score=45.50 Aligned_cols=89 Identities=11% Similarity=-0.032 Sum_probs=65.8
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHHH----HHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDAS----LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~----~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.++.+..- .+.++|. .+.+.|++.|-= ...+..++.+.++++.. .+||+
T Consensus 226 d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa 295 (440)
T 3t6c_A 226 IPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLED--------PVAPENTEWLKMLRQQS--STPIA 295 (440)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC--------SSCGGGGGGHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEEC--------CCChhhHHHHHHHHhhc--CCCEE
Confidence 456789999987 578888853 5666653 445667777741 11233566778888876 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++..+.+..|+.+++..| +|.|++--.
T Consensus 296 ~dE~~~~~~~~~~~i~~~a~d~v~~k~~ 323 (440)
T 3t6c_A 296 MGELFVNVNEWKPLIDNKLIDYIRCHIS 323 (440)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCGG
T ss_pred eCcccCCHHHHHHHHHcCCccceeechh
Confidence 999999999999999987 798887643
No 417
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=92.57 E-value=1.5 Score=41.17 Aligned_cols=113 Identities=19% Similarity=0.109 Sum_probs=78.5
Q ss_pred cCHHHHHHHHHhCCCEEEEeC---CCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEEc
Q 017434 237 LTAEDASLAIQYGAAGIIVSN---HGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR-GTDVFKALALGASGVFVG 312 (371)
Q Consensus 237 ~~~e~a~~a~~~Gad~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~-~~dv~kal~lGAd~V~iG 312 (371)
.+|++|+...+.|+|.+-++. ||-+......-.++.|.+|.+.++.++|++.=||=.. -+++.+++.+|..-|-|+
T Consensus 172 T~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 172 TTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 468999888899999998863 5543111112367889999998854799999886544 466889999999999999
Q ss_pred hhHHHhhhc--------CCh-HHHHHHHHHHHHHHHHHHHHhCCCC
Q 017434 313 RPVPFSLAV--------DGE-AGVRKVLQMLRDEFELTMALSGCRS 349 (371)
Q Consensus 313 r~~l~~~~~--------~G~-~gv~~~l~~l~~el~~~m~~~G~~~ 349 (371)
+-+..+... ..+ .-+....+.+++.++..|..+|...
T Consensus 252 Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~g 297 (306)
T 3pm6_A 252 RAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTG 297 (306)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 976433210 011 1123344667788888899998754
No 418
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.53 E-value=1.7 Score=37.75 Aligned_cols=88 Identities=17% Similarity=0.042 Sum_probs=55.8
Q ss_pred HHHHHHHHhh-cCCCEEEEE--ccCHHH-HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEe-cC
Q 017434 217 WKDVKWLQTI-TSLPILVKG--VLTAED-ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLD-GG 291 (371)
Q Consensus 217 ~~~i~~ir~~-~~~pv~vK~--v~~~e~-a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~-GG 291 (371)
.+.++++|+. .+.|+.+=. ....+. ++.+.++|+|+|.++... ....+..+.+..+.. .++++.+ -+
T Consensus 41 ~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~------~~~~~~~~~~~~~~~--g~~~~v~~~~ 112 (211)
T 3f4w_A 41 VNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT------DVLTIQSCIRAAKEA--GKQVVVDMIC 112 (211)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS------CHHHHHHHHHHHHHH--TCEEEEECTT
T ss_pred HHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC------ChhHHHHHHHHHHHc--CCeEEEEecC
Confidence 4678999988 478886533 233455 899999999999995421 112222222222233 4666653 45
Q ss_pred CCCH-HHHHHHHHcCCCEEEEc
Q 017434 292 VRRG-TDVFKALALGASGVFVG 312 (371)
Q Consensus 292 I~~~-~dv~kal~lGAd~V~iG 312 (371)
..+. +.+.++..+|+|.|.+.
T Consensus 113 ~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 113 VDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp CSSHHHHHHHHHHHTCCEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEc
Confidence 6666 44677778999998875
No 419
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.46 E-value=1.4 Score=41.08 Aligned_cols=87 Identities=21% Similarity=0.224 Sum_probs=60.1
Q ss_pred CHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeC--------CCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSN--------HGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~--------~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
++...+.+.+..+.++++ .+...+.++.+.++|+|+|.+-+ .+|. ......+.+.++++.+ ++||+
T Consensus 9 ~~~~~~~~~~~~~~g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~---~~~~~~~~i~~I~~~~--~iPv~ 82 (305)
T 2nv1_A 9 TERVKRGMAEMQKGGVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGV---ARMADPTIVEEVMNAV--SIPVM 82 (305)
T ss_dssp CHHHHHHHHHTTTTCEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCC---CCCCCHHHHHHHHHHC--SSCEE
T ss_pred cHHHHHHHHHHccCCeee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc---ccCCCHHHHHHHHHhC--CCCEE
Confidence 344455566667778886 55677889999999999995432 1111 0123567788887776 78998
Q ss_pred EecCCCC--HHHHHHHHHcCCCEEE
Q 017434 288 LDGGVRR--GTDVFKALALGASGVF 310 (371)
Q Consensus 288 a~GGI~~--~~dv~kal~lGAd~V~ 310 (371)
+ +++. .+++..++++|||+|.
T Consensus 83 ~--k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 83 A--KARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp E--EECTTCHHHHHHHHHHTCSEEE
T ss_pred e--cccccchHHHHHHHHCCCCEEE
Confidence 5 4444 6677777889999997
No 420
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=92.42 E-value=1.3 Score=42.41 Aligned_cols=41 Identities=10% Similarity=0.195 Sum_probs=36.5
Q ss_pred CHHHHHHHHhhcCCCEEEEEcc-CHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTITSLPILVKGVL-TAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~-~~e~a~~a~~~Gad~I~vs 256 (371)
.|+.++++++..++||++-|.. +++++..++++|+|+|.++
T Consensus 196 ~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 196 LLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3888999998889999988755 9999999999999999995
No 421
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=92.37 E-value=0.91 Score=43.93 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=63.4
Q ss_pred CHHHHHHHHhhc-CCCEEEEEc--cCHHH----HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 216 NWKDVKWLQTIT-SLPILVKGV--LTAED----ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~v--~~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
+.+.++.+|+.+ +.++.+..- .+.++ ++.+.+.|++.|- -...+..++.+.++++.. .+||.+
T Consensus 179 d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~iPIa~ 248 (385)
T 3i6e_A 179 DIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIE--------QPVRAHHFELMARLRGLT--DVPLLA 248 (385)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEE--------CCSCTTCHHHHHHHHTTC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--------CCCCcccHHHHHHHHHhC--CCCEEE
Confidence 346688888886 567777642 34444 4556677877764 112233577788777665 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
+.-+.+..|+.+++..| +|.|++--.
T Consensus 249 dE~~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 249 DESVYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp STTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999987 799888643
No 422
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=92.30 E-value=1.7 Score=38.19 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=37.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeC
Q 017434 214 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
.+.|+.++++++..++|+++=|..+++++..+.++|+|+|.++.
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEhH
Confidence 35688899998888999998876699999999999999999953
No 423
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.27 E-value=1.8 Score=37.55 Aligned_cols=44 Identities=16% Similarity=0.367 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeC
Q 017434 214 SLNWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 214 ~~~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
...|+.++++++..++|+++-+..+++++..+.++|+|++.++.
T Consensus 148 ~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESH
T ss_pred CcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhH
Confidence 34688899998888999999887779999999999999999853
No 424
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=92.26 E-value=1.2 Score=42.43 Aligned_cols=99 Identities=12% Similarity=0.099 Sum_probs=65.1
Q ss_pred CHHHHHHHHhh--cCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCC-----c--------cchHHHHHHHHHHh
Q 017434 216 NWKDVKWLQTI--TSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDY-----V--------PATVMALEEVVQAA 280 (371)
Q Consensus 216 ~~~~i~~ir~~--~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~-----~--------~~~~~~l~~i~~~~ 280 (371)
+|+=++.++.. -++++-+=.+++.+.+..|.++|+.+|..+ -||-.|+ + -+.+..+.++.+.+
T Consensus 140 T~eGl~A~~~L~~~GI~~N~TliFS~~Qa~~aa~AGa~~ISPF--VgRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y 217 (334)
T 3hjz_A 140 TWEGIKAAEILEKEGIKCNLTLLFNFCQAVTCANANITLISPF--VGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYF 217 (334)
T ss_dssp SHHHHHHHHHHHHTTCCEEEESCCSHHHHHHHHHTTCSEECCB--HHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEee--ccHHHHHhhhccCCcccccccCcHHHHHHHHHHHH
Confidence 45544444432 288998888999999999999999988653 1221110 1 12344555554433
Q ss_pred ---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhh
Q 017434 281 ---KGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSL 319 (371)
Q Consensus 281 ---~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~ 319 (371)
+.+..|++ -.+|+..++.. .+|||.+-|.-.++..+
T Consensus 218 ~~~g~~T~vl~-ASfRn~~~v~~--laG~d~~Tipp~ll~~L 256 (334)
T 3hjz_A 218 KEKGFKTEVMG-ASFRNLDEIKE--LAGCDLLTIAPKFLEEL 256 (334)
T ss_dssp HHHTCCCEEEE-BCCSSHHHHHH--TTTCSEEEECHHHHHHH
T ss_pred HHcCCCCEEEE-ecCCCHHHHHH--HhCCCEEEcCHHHHHHH
Confidence 23555555 46999999997 46999998888777554
No 425
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=92.24 E-value=0.51 Score=43.85 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=35.4
Q ss_pred CHHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
.++.++++++.+++||+.-+ +.+.+++..++++|||+|.+.
T Consensus 229 ~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 229 ALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 45778999998899998765 568999999999999999984
No 426
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=92.20 E-value=1 Score=39.63 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=37.1
Q ss_pred CCHHHHHHHHhhcC-CCEEEEEccCHHHHHHHHHhCCCEEEEeC
Q 017434 215 LNWKDVKWLQTITS-LPILVKGVLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 215 ~~~~~i~~ir~~~~-~pv~vK~v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
+.|+.++++++..+ +|+++-+..+++++..+.++|+|+|.++.
T Consensus 158 ~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 158 QGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp CTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESH
T ss_pred cCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhH
Confidence 46888999998887 99998887779999889999999999953
No 427
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=91.97 E-value=3.2 Score=39.21 Aligned_cols=108 Identities=14% Similarity=0.229 Sum_probs=76.2
Q ss_pred cCHHHHHHHH-HhCCCEEEEeC---CCCcCCCCccch----HHHHHHHHHHhcCCCcEEEec------------------
Q 017434 237 LTAEDASLAI-QYGAAGIIVSN---HGARQLDYVPAT----VMALEEVVQAAKGRVPVFLDG------------------ 290 (371)
Q Consensus 237 ~~~e~a~~a~-~~Gad~I~vs~---~gg~~~~~~~~~----~~~l~~i~~~~~~~i~via~G------------------ 290 (371)
.+|++|.... +.|+|.+-++. ||.+... +.|. ++.|.+|.+.+ ++|++.=|
T Consensus 153 TdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 153 TEPQDAKKFVELTGVDALAVAIGTSHGAYKFK-SESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCC-C----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhccc
Confidence 5688887765 79999999974 5544221 3333 57899999988 79999999
Q ss_pred -----CCCCHHHHHHHHHcCCCEEEEchhHHHhhhc-------CC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017434 291 -----GVRRGTDVFKALALGASGVFVGRPVPFSLAV-------DG-----E-AGVRKVLQMLRDEFELTMALSGCR 348 (371)
Q Consensus 291 -----GI~~~~dv~kal~lGAd~V~iGr~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 348 (371)
|+. .+++.+++.+|..-|-+++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 230 ~~~~~Gvp-~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 230 MPDAVGVP-IESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp CTTCBCCC-HHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cccCCCCC-HHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 554 688999999999999999976543211 01 1 123344567788888889999864
No 428
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=91.93 E-value=7.9 Score=35.98 Aligned_cols=188 Identities=15% Similarity=0.131 Sum_probs=107.1
Q ss_pred eeecCcccCcceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEE
Q 017434 66 TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQ 131 (371)
Q Consensus 66 ~~i~G~~~~~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~Q 131 (371)
|.|-|. .|-++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ -|.++.
T Consensus 10 ~~~~Gv---~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaG 86 (303)
T 2wkj_A 10 TNLRGV---MAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAH 86 (303)
T ss_dssp GGGCSE---EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCCCce---EEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 445453 45556776433333444445777777788985543 32 2345665532 22 22 456666
Q ss_pred EeecCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhc
Q 017434 132 LYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQI 211 (371)
Q Consensus 132 Ly~~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (371)
.- ..+.+...++.+.|+++|++++.+. .|.+-+ | +
T Consensus 87 vg-~~~t~~ai~la~~A~~~Gadavlv~--~P~y~~-----------~---s---------------------------- 121 (303)
T 2wkj_A 87 VG-CVSTAESQQLAASAKRYGFDAVSAV--TPFYYP-----------F---S---------------------------- 121 (303)
T ss_dssp CC-CSSHHHHHHHHHHHHHHTCSEEEEE--CCCSSC-----------C---C----------------------------
T ss_pred cC-CCCHHHHHHHHHHHHhCCCCEEEec--CCCCCC-----------C---C----------------------------
Confidence 53 3466677789999999999999874 333200 0 0
Q ss_pred ccCCCHHHHHHHHhhcC-CCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC
Q 017434 212 DRSLNWKDVKWLQTITS-LPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKG 282 (371)
Q Consensus 212 ~~~~~~~~i~~ir~~~~-~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~ 282 (371)
..-..+..+.|.+.++ +||++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+. .+
T Consensus 122 -~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s~----------gd~~~~~~~~~~-~~ 189 (303)
T 2wkj_A 122 -FEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALXQTS----------GDLYQMEQIRRE-HP 189 (303)
T ss_dssp -HHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEECC----------CCHHHHHHHHHH-CT
T ss_pred -HHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEeCCC----------CCHHHHHHHHHh-CC
Confidence 0002244566677778 99998764 4677777776532 33333322 123344455444 33
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 283 RVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 283 ~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+..|+. |. ...++.++.+|++++.-+..-++
T Consensus 190 ~f~v~~-G~---d~~~~~~l~~G~~G~is~~an~~ 220 (303)
T 2wkj_A 190 DLVLYN-GY---DNIFASGLLAGADGGIGSTYNIM 220 (303)
T ss_dssp TCEEEE-CC---GGGHHHHHHHTCCEEEETTHHHH
T ss_pred CeEEEe-Cc---HHHHHHHHHCCCCEEEeCHHHhC
Confidence 454443 32 34488889999999999976443
No 429
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=91.83 E-value=0.35 Score=44.27 Aligned_cols=40 Identities=30% Similarity=0.391 Sum_probs=33.8
Q ss_pred HHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 217 WKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
.+.++++|+.++.|+.+.. +.++++++.+.+ ++|+++|.+
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 4678999999999999985 578999998876 699999954
No 430
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=91.68 E-value=0.24 Score=45.94 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=38.5
Q ss_pred CCHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 215 LNWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
...+.|+++++.+ ++|+++.+ +.++++++.+.++|||+|++++
T Consensus 212 v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 212 VPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp CCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred CCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 4568899999999 89999995 6899999999999999999965
No 431
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=91.62 E-value=0.5 Score=45.87 Aligned_cols=125 Identities=7% Similarity=-0.008 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHH
Q 017434 139 NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWK 218 (371)
Q Consensus 139 ~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (371)
+.+.+.++++.++||+++-+.++... +| +| +..+.....+
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~----------~~-~~-----------------------------~~~~~~~~~e 189 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGG----------RH-MP-----------------------------LWEGTKRDIA 189 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHH----------HT-SC-----------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCc----------cc-CC-----------------------------ccccHHHHHH
Confidence 66777778888899999987653100 01 00 0001223567
Q ss_pred HHHHHHhhc--CCCEEEEE--ccCHHHHHHH----HHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc---CCCcEE
Q 017434 219 DVKWLQTIT--SLPILVKG--VLTAEDASLA----IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK---GRVPVF 287 (371)
Q Consensus 219 ~i~~ir~~~--~~pv~vK~--v~~~e~a~~a----~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi 287 (371)
.++.+|+.+ +.++.+-. ..+.+++.+. .+.|++.|- . ... ..++.+.++++.+. .++||+
T Consensus 190 ~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE---~-----P~~-~d~~~~~~l~~~l~~~g~~iPIa 260 (392)
T 3p3b_A 190 IVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVNLYWLE---E-----AFH-EDEALYEDLKEWLGQRGQNVLIA 260 (392)
T ss_dssp HHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSCEEEEE---C-----SSS-CCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEe---c-----CCc-ccHHHHHHHHHhhccCCCCccEE
Confidence 789999877 57887753 2466765433 344444332 0 111 35777888887720 279999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++ +.+..++.++++.| +|.|++=-
T Consensus 261 ~dE-~~~~~~~~~~i~~~~~d~v~ik~ 286 (392)
T 3p3b_A 261 DGE-GLASPHLIEWATRGRVDVLQYDI 286 (392)
T ss_dssp ECC-SSCCTTHHHHHHTTSCCEECCBT
T ss_pred ecC-CCCHHHHHHHHHcCCCCEEEeCc
Confidence 999 99999999999998 89888753
No 432
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=91.57 E-value=0.66 Score=43.86 Aligned_cols=81 Identities=16% Similarity=0.114 Sum_probs=59.7
Q ss_pred HHHHHHHHhhcCCCEEEEEcc-C---HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 217 WKDVKWLQTITSLPILVKGVL-T---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v~-~---~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
.+.++++++.++.|+.+.... + .+.++.+.+.|+|.|.++. + .+ ...+..+++. .++|+. ++
T Consensus 66 ~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~--g------~p-~~~~~~l~~~---g~~v~~--~v 131 (326)
T 3bo9_A 66 RKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGA--G------NP-TKYIRELKEN---GTKVIP--VV 131 (326)
T ss_dssp HHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEES--S------CC-HHHHHHHHHT---TCEEEE--EE
T ss_pred HHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECC--C------Cc-HHHHHHHHHc---CCcEEE--Ec
Confidence 356788888778899888654 2 3567888999999998843 2 12 3444444432 577775 68
Q ss_pred CCHHHHHHHHHcCCCEEEE
Q 017434 293 RRGTDVFKALALGASGVFV 311 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~i 311 (371)
.+.+++.++...|+|+|.+
T Consensus 132 ~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 132 ASDSLARMVERAGADAVIA 150 (326)
T ss_dssp SSHHHHHHHHHTTCSCEEE
T ss_pred CCHHHHHHHHHcCCCEEEE
Confidence 8999999999999999998
No 433
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=91.49 E-value=8.5 Score=35.46 Aligned_cols=178 Identities=21% Similarity=0.233 Sum_probs=104.2
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~~ 141 (371)
|.++.|+. .+-.+.++-..+.+-.-+.|+...+ +| +.+.+.+|-. +. .+ -|.+...- ..+.+..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 44566765 5444555555777777788986543 32 2345655532 12 22 45566653 3466677
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+-+ | + ..-..+..+
T Consensus 85 i~la~~a~~~Gadavlv~--~P~y~~-----------~---s-----------------------------~~~l~~~f~ 119 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSI--TPYYNK-----------P---T-----------------------------QEGLRKHFG 119 (289)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCSSC-----------C---C-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCCC-----------C---C-----------------------------HHHHHHHHH
Confidence 789999999999999874 333200 0 0 001234466
Q ss_pred HHHhhcCCCEEEEEc-------cCHHHHHHHH-Hh-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 222 WLQTITSLPILVKGV-------LTAEDASLAI-QY-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v-------~~~e~a~~a~-~~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
.+.+.+++|+++=.+ .+++...++. +. .+-+|+-+. .++..+.++.+.. +..| .+|.
T Consensus 120 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiK~s~----------gd~~~~~~~~~~~--~f~v-~~G~- 185 (289)
T 2yxg_A 120 KVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEAN----------PNLSQVSELIHDA--KITV-LSGN- 185 (289)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC----------SCTHHHHHHHHHT--CSEE-EESC-
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEeCC----------CCHHHHHHHHHhC--CeEE-EECc-
Confidence 777778999998764 4677777776 43 233444322 1223344454443 4544 3442
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 186 --d~~~~~~l~~G~~G~is~~~n~ 207 (289)
T 2yxg_A 186 --DELTLPIIALGGKGVISVVANI 207 (289)
T ss_dssp --GGGHHHHHHTTCCEEEESGGGT
T ss_pred --HHHHHHHHHCCCCEEEeChhhh
Confidence 3457788999999999988643
No 434
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=91.29 E-value=7.5 Score=35.89 Aligned_cols=182 Identities=14% Similarity=0.131 Sum_probs=102.3
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~~ 141 (371)
|.++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ .|.+...- ..+.+..
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4456666433333444445677777778876543 32 2345665532 12 22 45666653 3456667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+- -| + ..-..+..+
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y~-----------~~---s-----------------------------~~~l~~~f~ 120 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTV--TPYYN-----------RP---S-----------------------------QEGLYQHFK 120 (292)
T ss_dssp HHHHHHTTTSSCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHHH
Confidence 788899999999999774 33320 00 0 001234456
Q ss_pred HHHhhcCCCEEEEEc-------cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017434 222 WLQTITSLPILVKGV-------LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRR 294 (371)
Q Consensus 222 ~ir~~~~~pv~vK~v-------~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~ 294 (371)
.+.+.+++|+++=.+ .+++...++.+. ..|+-. .+.. .++..+.++.+..+++..|+ +|.
T Consensus 121 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi------K~s~-gd~~~~~~~~~~~~~~f~v~-~G~--- 187 (292)
T 2ojp_A 121 AIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKV--KNIIGI------XEAT-GNLTRVNQIKELVSDDFVLL-SGD--- 187 (292)
T ss_dssp HHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTS--TTEEEC-------CCS-CCTHHHHHHHTTSCTTSBCE-ESC---
T ss_pred HHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcC--CCEEEE------eCCC-CCHHHHHHHHHhcCCCEEEE-ECc---
Confidence 777778899998764 467777777653 233210 1111 12334445554444345553 342
Q ss_pred HHHHHHHHHcCCCEEEEchhHH
Q 017434 295 GTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 295 ~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 188 d~~~~~~l~~G~~G~is~~~n~ 209 (292)
T 2ojp_A 188 DASALDFMQYGGHGVISVTANV 209 (292)
T ss_dssp GGGHHHHHHTTCCEEEESGGGT
T ss_pred HHHHHHHHHCCCcEEEeCHHHh
Confidence 3457788999999999987543
No 435
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=91.04 E-value=4.6 Score=37.82 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=73.4
Q ss_pred cCHHHHHHH-HHhCCCEEEEeC---CCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCC-------------------
Q 017434 237 LTAEDASLA-IQYGAAGIIVSN---HGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGV------------------- 292 (371)
Q Consensus 237 ~~~e~a~~a-~~~Gad~I~vs~---~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI------------------- 292 (371)
.+|++|... .+.|+|.+-++. ||.+...+.| -.++.|.+|.+.. ++|++.=||=
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~vp~~~~~~~~~~gg~~~~ 232 (307)
T 3n9r_A 155 VNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASAIPDNVRKSYLDAGGDLKG 232 (307)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCCCCHHHHHHHHHTTCCCTT
T ss_pred CCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCCcchHHHHHHHHhcCccCC
Confidence 468888775 469999999973 5544222222 2677888886654 6999998843
Q ss_pred ---CCHHHHHHHHHcCCCEEEEchhHHHhhhc-------CC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017434 293 ---RRGTDVFKALALGASGVFVGRPVPFSLAV-------DG-----E-AGVRKVLQMLRDEFELTMALSGCR 348 (371)
Q Consensus 293 ---~~~~dv~kal~lGAd~V~iGr~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 348 (371)
...+++.+++.+|..-|-|++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 233 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 304 (307)
T 3n9r_A 233 SKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSA 304 (307)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 23688999999999999999976543210 01 1 123333456677777778887764
No 436
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=90.98 E-value=0.62 Score=43.60 Aligned_cols=96 Identities=21% Similarity=0.175 Sum_probs=59.9
Q ss_pred CHHHHHHHHhhcCCCEEEEEcc--CHHH----HHHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcCCCcEEE
Q 017434 216 NWKDVKWLQTITSLPILVKGVL--TAED----ASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~--~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~i~via 288 (371)
+.+.++++. .++.||++|..+ +++| ++.+.+.|.+-|++--.|-+--+.. ..++..++.+++ . .+||+.
T Consensus 144 n~~LLr~va-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~--~~PV~~ 219 (298)
T 3fs2_A 144 QTDLLIAAA-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-L--GAPVIF 219 (298)
T ss_dssp CHHHHHHHH-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-T--TSCEEE
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-c--CCcEEE
Confidence 345666665 569999999763 6655 4555677888787753332110111 124666777776 5 699999
Q ss_pred e---------------cCCCCH--HHHHHHHHcCCCEEEEchhH
Q 017434 289 D---------------GGVRRG--TDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 289 ~---------------GGI~~~--~dv~kal~lGAd~V~iGr~~ 315 (371)
| ||-|.- .-...|+++|||+++|=+-+
T Consensus 220 D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 220 DATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp EHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred cCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 6 343322 22457888999999998754
No 437
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=90.87 E-value=1.7 Score=40.29 Aligned_cols=89 Identities=17% Similarity=0.135 Sum_probs=51.7
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVP-ATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-.. -..+.+..+.+.+.+ ||+--|=.+-.++++ +-.+|||+|++-.|++
T Consensus 25 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 101 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLPPYY 101 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 45678899999999665442111111 123445555666543 544333334444443 3347999999999998
Q ss_pred Hh-hhcCChHHHHHHHHHHHH
Q 017434 317 FS-LAVDGEAGVRKVLQMLRD 336 (371)
Q Consensus 317 ~~-~~~~G~~gv~~~l~~l~~ 336 (371)
+. . .++++.++++.+.+
T Consensus 102 ~~~~---s~~~l~~~f~~va~ 119 (286)
T 2r91_A 102 FPRL---SERQIAKYFRDLCS 119 (286)
T ss_dssp STTC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHH
Confidence 75 3 45666555555443
No 438
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=90.82 E-value=0.94 Score=43.80 Aligned_cols=40 Identities=10% Similarity=-0.036 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhC-CCEEEEe
Q 017434 217 WKDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~G-ad~I~vs 256 (371)
++.++++|+.+++||+.-+..++++++.+++.| +|+|.+.
T Consensus 288 ~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 288 EGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp TTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEeec
Confidence 566889999999999987766899999999998 9999883
No 439
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=90.79 E-value=2 Score=37.40 Aligned_cols=36 Identities=25% Similarity=0.258 Sum_probs=30.4
Q ss_pred HHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 218 KDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
+.++++ ++.|+++.| +.+.|++.. +++||++|+.|+
T Consensus 142 ~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 142 KVARKI---PGRTVIAAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp HHHTTS---TTSEEEEESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred HHHHHh---cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 445555 688999997 588999999 999999999986
No 440
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=90.75 E-value=0.18 Score=44.94 Aligned_cols=58 Identities=19% Similarity=0.201 Sum_probs=38.5
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH---H------HHHHHHcCCCEEEEc
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT---D------VFKALALGASGVFVG 312 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~---d------v~kal~lGAd~V~iG 312 (371)
++. .+.|+| ++.+. +.+..+++.++ .+ +.++||+--. | ..+ +..|||.+.+|
T Consensus 132 a~~-~e~G~d-vV~~~-------------~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvG 192 (213)
T 1vqt_A 132 EKL-NKLGCD-FVLPG-------------PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLG 192 (213)
T ss_dssp HHH-HHHTCE-EECCH-------------HHHHHHTTTCC--SC-EEECCBC---------CCBCHHH-HTTTCSEEEES
T ss_pred HHH-hcCCCE-EEEcH-------------HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEC
Confidence 556 788999 44321 34555555543 35 8889997432 2 567 88999999999
Q ss_pred hhHHHh
Q 017434 313 RPVPFS 318 (371)
Q Consensus 313 r~~l~~ 318 (371)
|+++.+
T Consensus 193 R~I~~a 198 (213)
T 1vqt_A 193 REIYLS 198 (213)
T ss_dssp HHHHTS
T ss_pred hhhcCC
Confidence 999853
No 441
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=90.71 E-value=3.8 Score=39.64 Aligned_cols=89 Identities=9% Similarity=-0.053 Sum_probs=65.9
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.++.+..- .++++| +.+.+.|+..|- -...+..++.+.++++.. .+||.
T Consensus 185 ~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE--------eP~~~~d~~~~~~l~~~~--~iPIa 254 (388)
T 3tcs_A 185 TEEIIPTMRRELGDDVDLLIDANSCYTPDRAIEVGHMLQDHGFCHFE--------EPCPYWELAQTKQVTDAL--DIDVT 254 (388)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHHHTTCCEEE--------CCSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCeEEE--------CCCCccCHHHHHHHHHhc--CCCEE
Confidence 346789999987 578887753 456664 556677877663 111233577888888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++..+.+..|+.++++.| +|.|++--.
T Consensus 255 ~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 255 GGEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp ECTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred cCCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999999999999987 788887643
No 442
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=90.57 E-value=0.34 Score=44.43 Aligned_cols=40 Identities=28% Similarity=0.269 Sum_probs=33.6
Q ss_pred HHHHHHHHhhcCCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 217 WKDVKWLQTITSLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 217 ~~~i~~ir~~~~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
.+.++++|+.+++|+.+.. +.+++++.. +..|+|+++|.+
T Consensus 195 ~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 195 KKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECH
T ss_pred HHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECH
Confidence 4678999999899999985 456999988 788999999954
No 443
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.44 E-value=1.3 Score=41.96 Aligned_cols=80 Identities=19% Similarity=0.229 Sum_probs=58.6
Q ss_pred HHHHHHHhhcCCCEEEEEcc-C---HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017434 218 KDVKWLQTITSLPILVKGVL-T---AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVR 293 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v~-~---~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~ 293 (371)
+.++++++.++.|+.+.... + .+.++.+.++|+|+|.++. +. | .+.+..+++ . .+||+.. +.
T Consensus 53 ~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~--g~-----p--~~~i~~l~~-~--g~~v~~~--v~ 118 (332)
T 2z6i_A 53 ANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGA--GN-----P--SKYMERFHE-A--GIIVIPV--VP 118 (332)
T ss_dssp HHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECS--SC-----G--GGTHHHHHH-T--TCEEEEE--ES
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECC--CC-----h--HHHHHHHHH-c--CCeEEEE--eC
Confidence 55778888778899887754 3 3557889999999999843 21 1 233444444 2 5788864 78
Q ss_pred CHHHHHHHHHcCCCEEEE
Q 017434 294 RGTDVFKALALGASGVFV 311 (371)
Q Consensus 294 ~~~dv~kal~lGAd~V~i 311 (371)
+.+++.++...|+|++.+
T Consensus 119 ~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 119 SVALAKRMEKIGADAVIA 136 (332)
T ss_dssp SHHHHHHHHHTTCSCEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 899999998999999999
No 444
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=90.39 E-value=11 Score=34.80 Aligned_cols=177 Identities=15% Similarity=0.076 Sum_probs=100.2
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------ccCCCceEEEEeecCChHHHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------STGPGIRFFQLYVTKHRNVDAQ 143 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~~~~~~~~QLy~~~d~~~~~~ 143 (371)
|.++.|+.-.+-.+.++-..+++-..+.|+...+ +| +.+.+.+|-. +...+ .+...- ..+.+...+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~ 82 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIR 82 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHH
Confidence 4455666333333444444677777788986443 32 2345665532 22334 455543 346667778
Q ss_pred HHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHHHH
Q 017434 144 LVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWL 223 (371)
Q Consensus 144 ~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 223 (371)
+.+.|+++|++++.+. .|.+-++ | + ..-..+..+.+
T Consensus 83 la~~A~~~Gadavlv~--~P~y~~~----------~---s-----------------------------~~~l~~~f~~v 118 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASY--APYYYPR----------M---S-----------------------------EKHLVKYFKTL 118 (293)
T ss_dssp HHHHGGGSCCSEEEEE--CCCSCSS----------C---C-----------------------------HHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEc--CCCCCCC----------C---C-----------------------------HHHHHHHHHHH
Confidence 8999999999999874 3332000 0 0 00023446677
Q ss_pred HhhcCCCEEEEEc-------cCHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017434 224 QTITSLPILVKGV-------LTAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGT 296 (371)
Q Consensus 224 r~~~~~pv~vK~v-------~~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~ 296 (371)
.+.+++|+++=.+ .+++...+ .-.+-+|+-+. .++..+.++.+ .+++..|+ +|. ..
T Consensus 119 a~a~~lPiilYn~P~~tg~~l~~~~~~~--~pnIvgiKds~----------gd~~~~~~~~~-~~~~f~v~-~G~---d~ 181 (293)
T 1w3i_A 119 CEVSPHPVYLYNYPTATGKDIDAKVAKE--IGCFTGVKDTI----------ENIIHTLDYKR-LNPNMLVY-SGS---DM 181 (293)
T ss_dssp HHHCSSCEEEEECHHHHSCCCCHHHHHH--HCCEEEEEECC----------SCHHHHHHHHH-HCTTSEEE-ECC---ST
T ss_pred HhhCCCCEEEEECchhhCcCCCHHHHHh--cCCEEEEEeCC----------CCHHHHHHHHh-cCCCEEEE-Ecc---HH
Confidence 7778999998764 45666655 22344444332 12444555555 54455554 442 23
Q ss_pred HHHHHHHcCCCEEEEchhH
Q 017434 297 DVFKALALGASGVFVGRPV 315 (371)
Q Consensus 297 dv~kal~lGAd~V~iGr~~ 315 (371)
.++.++.+|++++.-+..-
T Consensus 182 ~~~~~l~~G~~G~is~~an 200 (293)
T 1w3i_A 182 LIATVASTGLDGNVAAGSN 200 (293)
T ss_dssp THHHHHHTTCCEEECGGGG
T ss_pred HHHHHHHcCCCEEEeCHHH
Confidence 4778889999999988854
No 445
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=90.23 E-value=12 Score=34.86 Aligned_cols=181 Identities=14% Similarity=0.136 Sum_probs=105.9
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 98 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAH 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 45667777433334444445777777788986443 22 2345665532 22 22 35666653 356777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+-+ | + ..-..+..
T Consensus 99 ai~la~~a~~~Gadavlv~--~P~y~~-----------~---s-----------------------------~~~l~~~f 133 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVV--TPYYSK-----------P---P-----------------------------QRGLQAHF 133 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSSC-----------C---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCCC-----------C---C-----------------------------HHHHHHHH
Confidence 8889999999999999874 333200 0 0 00123456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+.|.+.+++||++=.+ .+++...++.+.. +-+|+-+. .++..+.++.. +.+..|+ +|
T Consensus 134 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~--~~~f~v~-~G-- 198 (304)
T 3l21_A 134 TAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVXDAK----------ADLHSGAQIMA--DTGLAYY-SG-- 198 (304)
T ss_dssp HHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHH--HHCCEEE-ES--
T ss_pred HHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEECCC----------CCHHHHHHHhc--CCCeEEE-eC--
Confidence 7777778999998864 4677777776532 22333221 12333334432 2256664 44
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVPF 317 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l~ 317 (371)
+...++.++.+|++++.-+..-++
T Consensus 199 -~d~~~l~~l~~Ga~G~is~~~n~~ 222 (304)
T 3l21_A 199 -DDALNLPWLRMGATGFISVIAHLA 222 (304)
T ss_dssp -SGGGHHHHHHHTCCEEEESTHHHH
T ss_pred -chHHHHHHHHcCCCEEEecHHhhh
Confidence 234567889999999988875443
No 446
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=90.16 E-value=2 Score=40.84 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=34.2
Q ss_pred CHHHHHHHHhhc-CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTIT-SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
+++.+..+++.. ++||+.=+ +.+.+|+.+++.+|||+|.+.
T Consensus 238 ~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 238 TAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 456788888876 79988764 688999999999999999984
No 447
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.13 E-value=0.31 Score=43.69 Aligned_cols=70 Identities=13% Similarity=0.195 Sum_probs=52.2
Q ss_pred cCHHHHHHHHHhCCCEEEEeCC---CCcCCCCccchHHHHHHHH---HHhcCCCcEEEe-----cCCCCH--------HH
Q 017434 237 LTAEDASLAIQYGAAGIIVSNH---GARQLDYVPATVMALEEVV---QAAKGRVPVFLD-----GGVRRG--------TD 297 (371)
Q Consensus 237 ~~~e~a~~a~~~Gad~I~vs~~---gg~~~~~~~~~~~~l~~i~---~~~~~~i~via~-----GGI~~~--------~d 297 (371)
.+.+++..|.+.|||.|-+-.. ||. .|++..+..++ +.+ ++||.+. |++... +|
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~~~~--~ipV~vMIRPR~GdF~Ys~~E~~~M~~D 81 (224)
T 2bdq_A 9 ENLTDLTRLDKAIISRVELCDNLAVGGT-----TPSYGVIKEANQYLHEK--GISVAVMIRPRGGNFVYNDLELRIMEED 81 (224)
T ss_dssp ETTTTGGGCCTTTCCEEEEEBCGGGTCB-----CCCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCCc-----CCCHHHHHHHHHhhhhc--CCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 6788999999999999998643 332 46677777776 666 6888763 444433 37
Q ss_pred HHHHHHcCCCEEEEch
Q 017434 298 VFKALALGASGVFVGR 313 (371)
Q Consensus 298 v~kal~lGAd~V~iGr 313 (371)
+..+.++|||+|.+|=
T Consensus 82 i~~~~~~GadGvV~G~ 97 (224)
T 2bdq_A 82 ILRAVELESDALVLGI 97 (224)
T ss_dssp HHHHHHTTCSEEEECC
T ss_pred HHHHHHcCCCEEEEee
Confidence 7778889999999994
No 448
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=90.11 E-value=4.9 Score=38.25 Aligned_cols=101 Identities=13% Similarity=0.178 Sum_probs=66.5
Q ss_pred CHHHHHHHHhhc--CCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCcCCCC----------c----cchHHHHHHHHHH
Q 017434 216 NWKDVKWLQTIT--SLPILVKGVLTAEDASLAIQYGAAGIIVSNHGARQLDY----------V----PATVMALEEVVQA 279 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~~~~~----------~----~~~~~~l~~i~~~ 279 (371)
+|+=++.++... ++++-+=.+++.+.+..|.++|+.+|..+- ||-.|+ + .+.+..+.++.+.
T Consensus 163 T~eGi~A~~~L~~eGI~vN~TliFS~~Qa~~aAeAGa~~ISPFV--GRidD~~~~~~~~~~~~~~~~~~Gv~~v~~i~~~ 240 (345)
T 3tkf_A 163 TWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFV--GRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKL 240 (345)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECCHHHHHHHHHTTCSEEEEBS--HHHHHHHHHHTTCSSCCCGGGCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEeec--chHHHHhhhccccccccccccCCHHHHHHHHHHH
Confidence 455444444322 899998889999999999999999998742 221110 1 2344555555544
Q ss_pred hc--CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhh
Q 017434 280 AK--GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLA 320 (371)
Q Consensus 280 ~~--~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~ 320 (371)
+. +--+.+..-.+|+..++.. .+|||.+-|.-.++..+.
T Consensus 241 yk~~g~~T~Vl~ASfRn~~~V~a--LaG~d~vTipp~lL~~L~ 281 (345)
T 3tkf_A 241 YKSHGFKTIVMGASFRNVEQVIA--LAGCDALTISPVLLEELK 281 (345)
T ss_dssp HHHHTCCSEEEEBCCSSHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred HHHcCCCCEEEeCCCCCHHHHHH--HhCCCEEECCHHHHHHHH
Confidence 32 2234455567999999994 469999988887776654
No 449
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=90.06 E-value=3.5 Score=39.65 Aligned_cols=89 Identities=15% Similarity=0.076 Sum_probs=64.5
Q ss_pred CHHHHHHHHhhc--CCCEEEEE--ccCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKG--VLTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~--v~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.+ +.++.+.. ..+.++| +.+.+.|+..|- -...+..++.+.++++.. .+||+
T Consensus 180 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE--------qP~~~~d~~~~~~l~~~~--~ipIa 249 (382)
T 3dgb_A 180 DLAHVIAIKKALGDSASVRVDVNQAWDEAVALRACRILGGNGIDLIE--------QPISRNNRAGMVRLNASS--PAPIM 249 (382)
T ss_dssp HHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHHHTTTCCCEE--------CCBCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHhhcCcCeee--------CCCCccCHHHHHHHHHhC--CCCEE
Confidence 356688888877 36777764 2456654 445566766663 112234677888888876 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++.-+.+..|+.+++..| +|.|++--.
T Consensus 250 ~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 277 (382)
T 3dgb_A 250 ADESIECVEDAFNLAREGAASVFALKIA 277 (382)
T ss_dssp ESTTCSSHHHHHHHHHHTCCSEEEECHH
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 999999999999999986 899988643
No 450
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=90.04 E-value=2.9 Score=47.09 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=84.0
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHh-----cCCCcEEE-ecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAA-----KGRVPVFL-DGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~-----~~~i~via-~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
++|..+++.|+..|++|.++-..-....|.+-++..+..++ +.++.+++ +|-+|+.-|+.-.+-.||++|.=-=
T Consensus 591 ~~a~~av~~g~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyl 670 (1479)
T 1ea0_A 591 QETEDAVRGGATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYL 670 (1479)
T ss_dssp HHHHHHHHHTCCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHH
T ss_pred HHHHHHHHCCCcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccCHHH
Confidence 35778889999999999864321112345666666666554 22465555 5679999999988889999996221
Q ss_pred hH--HHhhhcCC-------hHHHHHHHHHHHHHHHHHHHHhCCCCHhhhccccee
Q 017434 314 PV--PFSLAVDG-------EAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIV 359 (371)
Q Consensus 314 ~~--l~~~~~~G-------~~gv~~~l~~l~~el~~~m~~~G~~~l~~l~~~~l~ 359 (371)
++ +..+...| .+.+.++.+.+.+.|...|..+|.+.++--++..+.
T Consensus 671 a~e~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiF 725 (1479)
T 1ea0_A 671 AQEAIAERHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNF 725 (1479)
T ss_dssp HHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCE
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceee
Confidence 11 11222223 357999999999999999999999999988876544
No 451
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=89.98 E-value=2.8 Score=37.88 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHhh--cCCCEEEEEccCHHHHHHHHHhCCCEEEEeC
Q 017434 214 SLNWKDVKWLQTI--TSLPILVKGVLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 214 ~~~~~~i~~ir~~--~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
...++.++++++. .++|++.=+..+++++..+.++|+|+|.|..
T Consensus 175 ~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 175 APGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEESH
T ss_pred hhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEeH
Confidence 3467888998886 4899988776799999999999999999853
No 452
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=89.85 E-value=4.5 Score=36.90 Aligned_cols=73 Identities=16% Similarity=0.084 Sum_probs=43.8
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc-CCCcEEEecCC--------CCHHHHHHH----HHcCC
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK-GRVPVFLDGGV--------RRGTDVFKA----LALGA 306 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~i~via~GGI--------~~~~dv~ka----l~lGA 306 (371)
.+++.+++.|+|.|.+...-|. . .....++.+.++++.++ ..+|+|..... ++.+.+.++ .++||
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~-~-~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GA 173 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGS-G-FEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGA 173 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTS-T-THHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCEEEEEEecCC-c-CHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCC
Confidence 4567788999999998532221 0 11123334444444432 16888887644 255666543 44899
Q ss_pred CEEEEchh
Q 017434 307 SGVFVGRP 314 (371)
Q Consensus 307 d~V~iGr~ 314 (371)
|.|-++.|
T Consensus 174 D~vkt~~~ 181 (263)
T 1w8s_A 174 DAMKIKYT 181 (263)
T ss_dssp SEEEEECC
T ss_pred CEEEEcCC
Confidence 99999964
No 453
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=89.84 E-value=1.4 Score=43.29 Aligned_cols=88 Identities=10% Similarity=-0.084 Sum_probs=64.2
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
..+.++.+|+.+ +.++.+..- .+.++| +.+.+.|++.|-- ...+..++.+.++++.+ .+||+
T Consensus 214 ~~e~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa 283 (426)
T 4e4f_A 214 TPKLFEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMED--------PTPAENQACFRLIRQHT--VTPIA 283 (426)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC--------CSCCSSGGGGHHHHTTC--CSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC--------CCChHHHHHHHHHHhcC--CCCEE
Confidence 346799999988 578888752 566665 4455678777742 11122455667777665 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++..+.+..++.+++..| +|.|++--
T Consensus 284 ~dE~~~~~~~~~~~i~~ga~d~v~~k~ 310 (426)
T 4e4f_A 284 VGEVFNSIWDCKQLIEEQLIDYIRTTI 310 (426)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999988 79888754
No 454
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=89.82 E-value=2.9 Score=40.17 Aligned_cols=42 Identities=21% Similarity=0.351 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 269 TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 269 ~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
.++.+.++++.. ++||+. +|+.+.+++..+..+|||+|.++.
T Consensus 213 ~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 456677777776 789986 778999999999999999999954
No 455
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=89.62 E-value=1.9 Score=38.42 Aligned_cols=76 Identities=18% Similarity=0.105 Sum_probs=50.8
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCC-ccchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHH----cCCCEEEEch
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDY-VPATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKALA----LGASGVFVGR 313 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~-~~~~~~~l~~i~~~~~~-~i~via~GGI~~~~dv~kal~----lGAd~V~iGr 313 (371)
.+++.|++.|||.|.+.-.-|.-.++ .....+.+..+++..++ .++||..-+.-+.+.+.++-. +|||.|=..+
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT 154 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTST 154 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 56788999999999985321211111 11234456667776643 478888888888888776544 6999998876
Q ss_pred hH
Q 017434 314 PV 315 (371)
Q Consensus 314 ~~ 315 (371)
.|
T Consensus 155 Gf 156 (220)
T 1ub3_A 155 GF 156 (220)
T ss_dssp SS
T ss_pred CC
Confidence 33
No 456
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=89.60 E-value=2.5 Score=38.09 Aligned_cols=73 Identities=21% Similarity=0.173 Sum_probs=47.0
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcC-CCcE--EEecCCCCHHHHHHHH----HcCCCEEEEc
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKG-RVPV--FLDGGVRRGTDVFKAL----ALGASGVFVG 312 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~-~i~v--ia~GGI~~~~dv~kal----~lGAd~V~iG 312 (371)
.+++.|++.|||.|.+.-.-|...+ ...+.+..+++..++ .+|+ |..-+.-+.+.+.++- ++|||.|=..
T Consensus 92 ~e~~~Av~~GAdEID~vinig~~~~---~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~eaGADfVKTs 168 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPHLSLGPE---AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRAGADIVKTS 168 (234)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGCHH---HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHTTCSEEESC
T ss_pred HHHHHHHHcCCCEEEEeccchHHHH---HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 5688899999999998533222111 334445666665532 3564 6666666777777654 3799999887
Q ss_pred hhH
Q 017434 313 RPV 315 (371)
Q Consensus 313 r~~ 315 (371)
+.|
T Consensus 169 TG~ 171 (234)
T 1n7k_A 169 TGV 171 (234)
T ss_dssp CSS
T ss_pred CCC
Confidence 644
No 457
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=89.55 E-value=3.5 Score=36.79 Aligned_cols=41 Identities=29% Similarity=0.368 Sum_probs=34.8
Q ss_pred CHHHHHHHHhhc-CCCEEEEEccCHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTIT-SLPILVKGVLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~v~~~e~a~~a~~~Gad~I~vs 256 (371)
..+.++++|+.. +.|+.|-+..+++.+..+.++|||.++++
T Consensus 156 ~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvG 197 (228)
T 3ovp_A 156 MMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSG 197 (228)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEe
Confidence 456688888876 57888888788999999999999999984
No 458
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=89.45 E-value=0.45 Score=42.83 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=36.3
Q ss_pred CHHHHHHHHhhc-CCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTIT-SLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
..+.++++++.+ ++|+++.+ +.++|+++.+. .|||+|+|++
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 578899999999 79999996 68999999988 7999999954
No 459
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=89.41 E-value=4.1 Score=39.26 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=83.6
Q ss_pred cCChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccC
Q 017434 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (371)
Q Consensus 135 ~~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (371)
..+++.+.+.++++.+.|++++-+.++++.. + .++.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-------------~-------------------------------~~~~ 178 (386)
T 3fv9_G 143 GDTPEAMRAKVARHRAQGFKGHSIKIGASEA-------------E-------------------------------GGPA 178 (386)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-------------T-------------------------------THHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-------------C-------------------------------CCHH
Confidence 3577878788888888999999887654210 0 0112
Q ss_pred CCHHHHHHHHhhc--CCCEEEEE--ccCHHHHHHHHH-h--CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 215 LNWKDVKWLQTIT--SLPILVKG--VLTAEDASLAIQ-Y--GAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 215 ~~~~~i~~ir~~~--~~pv~vK~--v~~~e~a~~a~~-~--Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
.+.+.++.+|+.+ +.++.+.. ..++++|.+..+ . +.+. .+- .-.+.++.+.++++.. .+||.
T Consensus 179 ~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~i-~iE--------eP~~~~~~~~~l~~~~--~iPIa 247 (386)
T 3fv9_G 179 LDAERITACLADRQPGEWYLADANNGLTVEHALRMLSLLPPGLDI-VLE--------APCASWAETKSLRARC--ALPLL 247 (386)
T ss_dssp HHHHHHHHHTTTCCTTCEEEEECTTCCCHHHHHHHHHHSCSSCCC-EEE--------CCCSSHHHHHHHHTTC--CSCEE
T ss_pred HHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHhhccCCc-EEe--------cCCCCHHHHHHHHhhC--CCCEE
Confidence 2456788898887 46777774 256777655432 2 2222 221 1112566777777665 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++..+.+..|+.+++..| +|.|++--
T Consensus 248 ~dE~~~~~~~~~~~~~~~a~d~v~~k~ 274 (386)
T 3fv9_G 248 LDELIQTETDLIAAIRDDLCDGVGLKV 274 (386)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEEEH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEECc
Confidence 999999999999999987 89988854
No 460
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=89.39 E-value=13 Score=34.39 Aligned_cols=180 Identities=14% Similarity=0.140 Sum_probs=103.7
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------cc-CC-CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~~ 140 (371)
.|.++-|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +. .+ -|.+...- ..+.+.
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ 99 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRT 99 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHH
Confidence 35556676433333444444677777788886443 32 3445665532 22 22 45666653 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+. -| + ..-..+..
T Consensus 100 ai~la~~A~~~Gadavlv~--~P~y~-----------~~---~-----------------------------~~~l~~~f 134 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVV--TPYYS-----------KP---S-----------------------------QEGLLAHF 134 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-----------CC---C-----------------------------HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC-----------CC---C-----------------------------HHHHHHHH
Confidence 7889999999999999874 33320 00 0 00123446
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGV 292 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI 292 (371)
+.|.+.+++|+++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+.. +..|+ +|.
T Consensus 135 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~--~f~v~-~G~- 200 (304)
T 3cpr_A 135 GAIAAATEVPICLYDIPGRSGIPIESDTMRRLSELPTILAVXDAK----------GDLVAATSLIKET--GLAWY-SGD- 200 (304)
T ss_dssp HHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHH--CCEEE-ECS-
T ss_pred HHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEecCC----------CCHHHHHHHHHhc--CEEEE-ECc-
Confidence 6777778999998764 4677777765532 22333221 1234444554443 45553 342
Q ss_pred CCHHHHHHHHHcCCCEEEEchhHH
Q 017434 293 RRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 293 ~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
...++.++.+|++++.-+..-+
T Consensus 201 --d~~~l~~l~~G~~G~is~~an~ 222 (304)
T 3cpr_A 201 --DPLNLVWLALGGSGFISVIGHA 222 (304)
T ss_dssp --GGGHHHHHHTTCCEEEESGGGT
T ss_pred --HHHHHHHHHCCCCEEEecHHHh
Confidence 3447788999999999988543
No 461
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=89.39 E-value=3.2 Score=40.23 Aligned_cols=88 Identities=11% Similarity=0.047 Sum_probs=63.4
Q ss_pred CHHHHHHHHhhc-CCCEEEEE--ccCHHHHH----HHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 216 NWKDVKWLQTIT-SLPILVKG--VLTAEDAS----LAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~--v~~~e~a~----~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
+.+.++.+|+.+ +.++.+-. ..++++|. .+.+.|++.|-= . .+.++.+.++++.. .+||.+
T Consensus 199 d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iEq--------P--~~d~~~~~~l~~~~--~iPIa~ 266 (398)
T 4dye_A 199 DVAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELDLEYLED--------P--CVGIEGMAQVKAKV--RIPLCT 266 (398)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------C--SSHHHHHHHHHHHC--CSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCCCEEcC--------C--CCCHHHHHHHHhhC--CCCEEe
Confidence 356688888887 45676653 24566654 355667776631 0 11677788888876 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchhH
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGRPV 315 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr~~ 315 (371)
+.-+.+..|+.+++..| +|.|++--..
T Consensus 267 dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 294 (398)
T 4dye_A 267 NMCVVRFEDFAPAMRLNAVDVIHGDVYK 294 (398)
T ss_dssp SSSCCSGGGHHHHHHTTCCSEEEECHHH
T ss_pred CCcCCCHHHHHHHHHhCCCCEEEeCccc
Confidence 99999999999999987 8988886533
No 462
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=89.19 E-value=11 Score=35.18 Aligned_cols=109 Identities=19% Similarity=0.279 Sum_probs=75.6
Q ss_pred cCHHHHHHHH-HhCCCEEEEeC---CCCcCCCCccc--hHHHHHHHHHHhcCCCcEEEecCC------------------
Q 017434 237 LTAEDASLAI-QYGAAGIIVSN---HGARQLDYVPA--TVMALEEVVQAAKGRVPVFLDGGV------------------ 292 (371)
Q Consensus 237 ~~~e~a~~a~-~~Gad~I~vs~---~gg~~~~~~~~--~~~~l~~i~~~~~~~i~via~GGI------------------ 292 (371)
.+|++|+... +.|+|.+-++. ||.+..+ +.+ .++.|.+|.+.+ ++|+..=||=
T Consensus 153 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~ 229 (305)
T 1rvg_A 153 TNPEEARIFMERTGADYLAVAIGTSHGAYKGK-GRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIG 229 (305)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCSS-SSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhccccc
Confidence 4688887765 59999999974 5544321 323 678899999988 5999988864
Q ss_pred ---C-CHHHHHHHHHcCCCEEEEchhHHHhhhc-------CC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017434 293 ---R-RGTDVFKALALGASGVFVGRPVPFSLAV-------DG-----E-AGVRKVLQMLRDEFELTMALSGCR 348 (371)
Q Consensus 293 ---~-~~~dv~kal~lGAd~V~iGr~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 348 (371)
. .-+++.+++.+|..-|-+++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 230 ~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 230 EAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp SCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 4678889999999999999976543211 01 1 123334466777778888888764
No 463
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=89.18 E-value=1.8 Score=40.14 Aligned_cols=89 Identities=16% Similarity=0.210 Sum_probs=49.1
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH----HcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKAL----ALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal----~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-... ..+.+..+++.+.+ ||+--|=.+-.++++.. .+|||+|++-.|++
T Consensus 26 v~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 102 (293)
T 1w3i_A 26 AENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYY 102 (293)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 355678999999996654321111111 22334444444433 54433333445554432 26999999999998
Q ss_pred Hh-hhcCChHHHHHHHHHHHH
Q 017434 317 FS-LAVDGEAGVRKVLQMLRD 336 (371)
Q Consensus 317 ~~-~~~~G~~gv~~~l~~l~~ 336 (371)
+. . .++++.++++.+.+
T Consensus 103 ~~~~---s~~~l~~~f~~va~ 120 (293)
T 1w3i_A 103 YPRM---SEKHLVKYFKTLCE 120 (293)
T ss_dssp CSSC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHh
Confidence 75 3 45666555554433
No 464
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.16 E-value=2.7 Score=39.09 Aligned_cols=92 Identities=21% Similarity=0.125 Sum_probs=59.3
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-Cc---CCCCccchHHHH-HHHHHHhc-CCCcEEEec--C
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-AR---QLDYVPATVMAL-EEVVQAAK-GRVPVFLDG--G 291 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-g~---~~~~~~~~~~~l-~~i~~~~~-~~i~via~G--G 291 (371)
++.+.+. +-|+++-++.+.-.|+.+.++|+|+|.+++.+ +. .-|.++-+++.. ..++...+ -++||++|. |
T Consensus 7 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~G 85 (290)
T 2hjp_A 7 LRAALDS-GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTG 85 (290)
T ss_dssp HHHHHHH-CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444432 56888888889999999999999999998531 11 123344444432 22222222 178999987 4
Q ss_pred CCCHHHHH----HHHHcCCCEEEEc
Q 017434 292 VRRGTDVF----KALALGASGVFVG 312 (371)
Q Consensus 292 I~~~~dv~----kal~lGAd~V~iG 312 (371)
..++.++. +.+.+||++|.|=
T Consensus 86 yg~~~~~~~~v~~l~~aGa~gv~iE 110 (290)
T 2hjp_A 86 FGNAVNVHYVVPQYEAAGASAIVME 110 (290)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEc
Confidence 44665554 4555899999873
No 465
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=89.15 E-value=5.3 Score=37.78 Aligned_cols=103 Identities=12% Similarity=0.177 Sum_probs=66.5
Q ss_pred CHHHHHHHHhh--cCCCEEEEEccCHHHHHHHHHhCCCEEEEeC----------CCCcCCC-CccchHHHHHHHHHHhc-
Q 017434 216 NWKDVKWLQTI--TSLPILVKGVLTAEDASLAIQYGAAGIIVSN----------HGARQLD-YVPATVMALEEVVQAAK- 281 (371)
Q Consensus 216 ~~~~i~~ir~~--~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~----------~gg~~~~-~~~~~~~~l~~i~~~~~- 281 (371)
+|+=++.++.. -++++-+=.+++...+..|.++|+.+|..+- .|+.... ...+.+..+.++.+.+.
T Consensus 144 T~eGl~A~~~L~~~GI~~N~TliFS~~Qa~aaA~AGa~~ISPFVgRidd~~~~~~~~~~~~~~~~~Gv~~v~~i~~~y~~ 223 (329)
T 3m16_A 144 TWEGIQAAKILEAEGIHCNLTLLFHFAQAQACAEAGTTLISPFVGRILDWYKANSGQSEYSASEDPGVVSVTEIYNFYKS 223 (329)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEBHHHHHHHHHTTSSCCCCCTTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEeehhHHHHHhhhcccccccccccCcHHHHHHHHHHHHHH
Confidence 45544444432 2889988889999999999999999988741 0111100 11234555555555432
Q ss_pred -CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhHHHhhh
Q 017434 282 -GRVPVFLDGGVRRGTDVFKALALGASGVFVGRPVPFSLA 320 (371)
Q Consensus 282 -~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~l~~~~ 320 (371)
+--+.+..-.+|+..++.. ..|||.+-|.-.++..+.
T Consensus 224 ~g~~T~v~~ASfRn~~~V~a--LaG~d~vTipp~~l~~l~ 261 (329)
T 3m16_A 224 HGFKTIVMGASFRNTGEIEE--LAGCDRLTISPELLAQLE 261 (329)
T ss_dssp TTCCCEEEEBCCSCHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred cCCCCEEEeCCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 2234555567999999994 469999988887776543
No 466
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=89.14 E-value=3.3 Score=38.72 Aligned_cols=92 Identities=21% Similarity=0.266 Sum_probs=61.4
Q ss_pred HHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-C-c---CCCCccchHH----HHHHHHHHhcCCCcEEEe
Q 017434 219 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-A-R---QLDYVPATVM----ALEEVVQAAKGRVPVFLD 289 (371)
Q Consensus 219 ~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-g-~---~~~~~~~~~~----~l~~i~~~~~~~i~via~ 289 (371)
.++++++. +-|+++-++.+.-.|+.+.++|+|+|.+++.+ + . .-|.++-+++ .+..|.+.. ++||++|
T Consensus 13 ~lr~l~~~-~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD 89 (298)
T 3eoo_A 13 KFRAAVAA-EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVD 89 (298)
T ss_dssp HHHHHHHH-SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEE
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEE
Confidence 35555443 57898888889999999999999999998621 1 0 1244444443 344454544 7899999
Q ss_pred c--CCCCHHHHH----HHHHcCCCEEEEch
Q 017434 290 G--GVRRGTDVF----KALALGASGVFVGR 313 (371)
Q Consensus 290 G--GI~~~~dv~----kal~lGAd~V~iGr 313 (371)
+ |..++.++. +....||.+|.|=-
T Consensus 90 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 119 (298)
T 3eoo_A 90 IDTGWGGAFNIARTIRSFIKAGVGAVHLED 119 (298)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEECC
Confidence 8 444555554 34558999998754
No 467
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=89.14 E-value=2.3 Score=39.42 Aligned_cols=125 Identities=18% Similarity=0.237 Sum_probs=72.4
Q ss_pred CHHHHHHHHhhcCCCEEEEEcc--CHHH----HHHHHHhCCCEEEEeCCCCcCCCCc--cchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTITSLPILVKGVL--TAED----ASLAIQYGAAGIIVSNHGARQLDYV--PATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~--~~e~----a~~a~~~Gad~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++++. .++.||++|..+ ++++ ++.+.+.|.+-|++--.|-+ .... ...+..++.+++..+ .+||+
T Consensus 123 n~~LLr~va-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~-y~~~~~~vdl~~i~~lk~~~~-~~pV~ 199 (285)
T 3sz8_A 123 QTDLVVAIA-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSS-FGYDNLVVDMLGFRQMAETTG-GCPVI 199 (285)
T ss_dssp CHHHHHHHH-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEE-CSSSCEECCTTHHHHHHHHTT-SCCEE
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCC-CCCCcCccCHHHHHHHHHhCC-CCCEE
Confidence 445667765 479999999753 6654 45667789888877533321 1111 134667777777652 38999
Q ss_pred Eec---------------CCCCH--HHHHHHHHcCCCEEEEchhHHHhh-hcCC-----hHHHHHHHHHHHHHHHHHHHH
Q 017434 288 LDG---------------GVRRG--TDVFKALALGASGVFVGRPVPFSL-AVDG-----EAGVRKVLQMLRDEFELTMAL 344 (371)
Q Consensus 288 a~G---------------GI~~~--~dv~kal~lGAd~V~iGr~~l~~~-~~~G-----~~gv~~~l~~l~~el~~~m~~ 344 (371)
.|. |-|.- .-...|+++|||+++|=..+--.- -+.| ++.+ +.|.++++..-..
T Consensus 200 ~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el----~~lv~~i~~i~~~ 275 (285)
T 3sz8_A 200 FDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQL----EGLLSQMKAIDDL 275 (285)
T ss_dssp EETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGH----HHHHHHHHHHHHH
T ss_pred EeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHH----HHHHHHHHHHHHH
Confidence 963 32211 234578889999999987543211 1233 2333 4455555555555
Q ss_pred hCC
Q 017434 345 SGC 347 (371)
Q Consensus 345 ~G~ 347 (371)
+|.
T Consensus 276 lg~ 278 (285)
T 3sz8_A 276 VKR 278 (285)
T ss_dssp HTT
T ss_pred hCC
Confidence 553
No 468
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=89.07 E-value=4 Score=35.87 Aligned_cols=87 Identities=18% Similarity=0.050 Sum_probs=56.0
Q ss_pred HHHHHHHHhhc-CCCE--EEEEccCHH-HHHHHHHhCCCEEEEeCCCCcCCCCccchH-HHHHHHHHHhcCCCcEEE-ec
Q 017434 217 WKDVKWLQTIT-SLPI--LVKGVLTAE-DASLAIQYGAAGIIVSNHGARQLDYVPATV-MALEEVVQAAKGRVPVFL-DG 290 (371)
Q Consensus 217 ~~~i~~ir~~~-~~pv--~vK~v~~~e-~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i~via-~G 290 (371)
.+.|+++|+.. +.|+ -+|....++ .++.+.++|+|+|+++..++ ...+ ..+..+++ . .++.++ .=
T Consensus 47 ~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~--g~~~~~d~l 117 (218)
T 3jr2_A 47 MKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-L--NGEIQIEIY 117 (218)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECC
T ss_pred HHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-h--CCccceeee
Confidence 36789998874 4454 456654444 47889999999999964321 1222 23333333 2 455554 34
Q ss_pred CCCCHHHHHHHHHcCCCEEEEc
Q 017434 291 GVRRGTDVFKALALGASGVFVG 312 (371)
Q Consensus 291 GI~~~~dv~kal~lGAd~V~iG 312 (371)
|+.|.+++.++...|+|.+.+.
T Consensus 118 ~~~T~~~~~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 118 GNWTMQDAKAWVDLGITQAIYH 139 (218)
T ss_dssp SSCCHHHHHHHHHTTCCEEEEE
T ss_pred ecCCHHHHHHHHHcCccceeee
Confidence 5678899999888999987653
No 469
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=89.03 E-value=1.9 Score=42.06 Aligned_cols=88 Identities=10% Similarity=0.110 Sum_probs=66.6
Q ss_pred CHHHHHHHHhhc--CCCEEEEEc--cCHHHHH----HHHHhCCCEEEEeCCCCcCCC-CccchHHHHHHHHHHhcCCCcE
Q 017434 216 NWKDVKWLQTIT--SLPILVKGV--LTAEDAS----LAIQYGAAGIIVSNHGARQLD-YVPATVMALEEVVQAAKGRVPV 286 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~v--~~~e~a~----~a~~~Gad~I~vs~~gg~~~~-~~~~~~~~l~~i~~~~~~~i~v 286 (371)
+.+.++.+|+.+ +.++.+-.- .+.++|. .+.+.|++.|-- . ..+..++.+.++++.. .+||
T Consensus 199 d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~~~~~~~~~l~~~~--~iPI 268 (410)
T 3dip_A 199 GLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVED--------PIAKMDNIPAVADLRRQT--RAPI 268 (410)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEEC--------CBSCTTCHHHHHHHHHHH--CCCE
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCCcccHHHHHHHHhhC--CCCE
Confidence 467799999988 478877642 5667654 445678877752 1 1223577888888887 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 287 FLDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 287 ia~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+++..+.+..|+.+++..| +|.|++--
T Consensus 269 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 296 (410)
T 3dip_A 269 CGGENLAGTRRFHEMLCADAIDFVMLDL 296 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred EecCCcCCHHHHHHHHHcCCCCeEeecc
Confidence 9999999999999999998 79998843
No 470
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=88.97 E-value=0.46 Score=43.11 Aligned_cols=41 Identities=24% Similarity=0.281 Sum_probs=36.6
Q ss_pred CHHHHHHHHhhc-CCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTIT-SLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
..+.++++++.+ ++|+.+.+ +.++|+++.+.+ |||+|+|.+
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 568899999999 99999996 689999999999 999999954
No 471
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.93 E-value=15 Score=34.19 Aligned_cols=184 Identities=13% Similarity=0.117 Sum_probs=104.7
Q ss_pred cceeecccccccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------ccCC--CceEEEEeecCChHH
Q 017434 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (371)
Q Consensus 75 ~Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~~~--~~~~~QLy~~~d~~~ 140 (371)
.|-++.|+.-.+-.+.++-..+.+-..+.|+...+ + +..+.+.+|-. +... .|.+...- ..+.+.
T Consensus 19 ~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ 97 (307)
T 3s5o_A 19 YPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQA 97 (307)
T ss_dssp ECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHH
T ss_pred EEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHH
Confidence 45556676433333333334566666678875443 2 23445665532 2222 34555543 346667
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHH
Q 017434 141 DAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDV 220 (371)
Q Consensus 141 ~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (371)
..++.+.|+++|++++.+. .|.+-+ | +. ...-..+..
T Consensus 98 ai~la~~A~~~Gadavlv~--~P~y~~-----------~-~~-----------------------------s~~~l~~~f 134 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVV--TPCYYR-----------G-RM-----------------------------SSAALIHHY 134 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCTTG-----------G-GC-----------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCcCC-----------C-CC-----------------------------CHHHHHHHH
Confidence 7789999999999999874 333200 0 00 000123456
Q ss_pred HHHHhhcCCCEEEEEc-------cCHHHHHHHHHhC-CCEEEEeCCCCcCCCCccchHHHHHHHHHHhc-CCCcEEEecC
Q 017434 221 KWLQTITSLPILVKGV-------LTAEDASLAIQYG-AAGIIVSNHGARQLDYVPATVMALEEVVQAAK-GRVPVFLDGG 291 (371)
Q Consensus 221 ~~ir~~~~~pv~vK~v-------~~~e~a~~a~~~G-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~i~via~GG 291 (371)
+.|.+.+++|+++=.+ .+++...++.+.. +-+|+-+. .++..+.++.+... ++..|+ +|.
T Consensus 135 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~f~v~-~G~ 203 (307)
T 3s5o_A 135 TKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVGMXDSG----------GDVTRIGLIVHKTRKQDFQVL-AGS 203 (307)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHHHTTTSSCEEE-ESS
T ss_pred HHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcCCCEEEEEcCC----------CCHHHHHHHHHhccCCCeEEE-eCc
Confidence 7777778999998875 4677777776532 22332221 13445555555442 355554 442
Q ss_pred CCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 292 VRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 292 I~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
.+.++.++.+|++++.-+..-+
T Consensus 204 ---d~~~l~~l~~G~~G~is~~an~ 225 (307)
T 3s5o_A 204 ---AGFLMASYALGAVGGVCALANV 225 (307)
T ss_dssp ---GGGHHHHHHHTCCEEECGGGGT
T ss_pred ---HHHHHHHHHcCCCEEEechhhh
Confidence 2457889999999999887543
No 472
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=88.93 E-value=5.2 Score=37.27 Aligned_cols=90 Identities=23% Similarity=0.353 Sum_probs=60.6
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-Cc----CCCCccchHH----HHHHHHHHhcCCCcEEEec
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-AR----QLDYVPATVM----ALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-g~----~~~~~~~~~~----~l~~i~~~~~~~i~via~G 290 (371)
++.+.+. +-|+++-++.+.-.|+.+.++|+|+|.+++.+ +. .-|.++-+++ .+..|.+.. ++||++|.
T Consensus 9 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~ 85 (295)
T 1xg4_A 9 FRAALTK-ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLVDA 85 (295)
T ss_dssp HHHHHHH-SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEEEC
T ss_pred HHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEecC
Confidence 4444432 56898888889999999999999999998642 11 1233444443 344444544 68999998
Q ss_pred --CCC-CHHHHH----HHHHcCCCEEEEc
Q 017434 291 --GVR-RGTDVF----KALALGASGVFVG 312 (371)
Q Consensus 291 --GI~-~~~dv~----kal~lGAd~V~iG 312 (371)
|.. ++.++. +.+..||++|.|=
T Consensus 86 d~Gyg~~~~~~~~~v~~l~~aGa~gv~iE 114 (295)
T 1xg4_A 86 DIGFGSSAFNVARTVKSMIKAGAAGLHIE 114 (295)
T ss_dssp TTCSSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 543 555554 4556899999873
No 473
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=88.91 E-value=2.7 Score=40.28 Aligned_cols=41 Identities=20% Similarity=0.303 Sum_probs=34.0
Q ss_pred CHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
+++.+.++++.+ ++||+.-+ +.+.+|+.+++.+|||+|.+.
T Consensus 258 ~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 258 SIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 467777777766 68988775 688999999999999999984
No 474
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=88.78 E-value=3.9 Score=38.87 Aligned_cols=42 Identities=14% Similarity=0.063 Sum_probs=35.9
Q ss_pred CCHHHHHHHHhhcCCCEEEEEc-cCHHHHHHHHHhC-CCEEEEe
Q 017434 215 LNWKDVKWLQTITSLPILVKGV-LTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 215 ~~~~~i~~ir~~~~~pv~vK~v-~~~e~a~~a~~~G-ad~I~vs 256 (371)
+.++.++++|+.+++||+.-+. .++++++.+++.| +|.|.+.
T Consensus 264 ~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 264 YQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALG 307 (343)
T ss_dssp TTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEES
T ss_pred eeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHH
Confidence 4678889999999999987764 5799999999998 9999873
No 475
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.77 E-value=14 Score=33.96 Aligned_cols=181 Identities=16% Similarity=0.144 Sum_probs=106.5
Q ss_pred ceeecccccccccCChHhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHh-------ccCC--CceEEEEeecCChHHH
Q 017434 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------STGP--GIRFFQLYVTKHRNVD 141 (371)
Q Consensus 76 Pi~iAPm~~~~~~~~~~e~~~a~aa~~~G~~~~~--s~---~~~~~~eei~-------~~~~--~~~~~QLy~~~d~~~~ 141 (371)
|.++.|+.-.+-.+.++-..+.+-..+.|+...+ +| +.+.+.+|-. +... -|.+...-. .+.+..
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV-DSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHH
Confidence 4456666333333444445777777788986543 32 2345665532 2222 456677643 466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHHHH
Q 017434 142 AQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVK 221 (371)
Q Consensus 142 ~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (371)
.++.+.|+++|++++.+. .|.+- + ..+ ..-..+..+
T Consensus 88 i~la~~A~~~Gadavlv~--~P~y~------------~-~~s-----------------------------~~~l~~~f~ 123 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLA--PPSYF------------K-NVS-----------------------------DDGLFAWFS 123 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC--CCCSS------------C-SCC-----------------------------HHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCcCC------------C-CCC-----------------------------HHHHHHHHH
Confidence 889999999999999863 34320 0 000 001234566
Q ss_pred HHHhhc---CCCEEEEEc-------cCHHHHHHHH-HhC--CCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 222 WLQTIT---SLPILVKGV-------LTAEDASLAI-QYG--AAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 222 ~ir~~~---~~pv~vK~v-------~~~e~a~~a~-~~G--ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
.+.+.+ ++|+++=.+ .+++...++. +.. +-+|+-+. .++..+.++.+..+ +..|+
T Consensus 124 ~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgiKds~----------gd~~~~~~~~~~~~-~f~v~- 191 (294)
T 3b4u_A 124 AVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDSS----------GNWSHTERLLKEHG-DLAIL- 191 (294)
T ss_dssp HHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEEEECC----------CCHHHHHHHHHHHT-TSEEE-
T ss_pred HHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEEEECC----------CCHHHHHHHHHhCC-CeEEE-
Confidence 777788 899998764 4677777776 442 33454332 12444555555554 45553
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchhHH
Q 017434 289 DGGVRRGTDVFKALALGASGVFVGRPVP 316 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~iGr~~l 316 (371)
+| +...++.++.+|++++.-+..-+
T Consensus 192 ~G---~d~~~l~~l~~G~~G~is~~~n~ 216 (294)
T 3b4u_A 192 IG---DERDLARGVRLGGQGAISGVANF 216 (294)
T ss_dssp EC---CHHHHHHHHHTTCCEEEESGGGT
T ss_pred Ec---cHHHHHHHHHCCCCEEEeCHHHh
Confidence 34 24567888999999999987544
No 476
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=88.72 E-value=0.47 Score=42.93 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=36.3
Q ss_pred CHHHHHHHHhhc-CCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTIT-SLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
..+.++++|+.+ +.|+++.+ +.++|+++.+.+ |||+++|++
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGS 215 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGD 215 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECC
Confidence 578899999999 89999995 689999999888 999999954
No 477
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=88.65 E-value=1.8 Score=40.05 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=47.9
Q ss_pred HHHHHHhCCCEEEEeCCCCcCCCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchhHH
Q 017434 242 ASLAIQYGAAGIIVSNHGARQLDYVPA-TVMALEEVVQAAKGRVPVFLDGGVRRGTDVFK----ALALGASGVFVGRPVP 316 (371)
Q Consensus 242 a~~a~~~Gad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~via~GGI~~~~dv~k----al~lGAd~V~iGr~~l 316 (371)
++.+++.|+|+|.+.++.|-...-... -.+.+..+.+.+.+ ||+--|=.+-.++++ +-++|||+|++-.|++
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 102 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYY 102 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 355678999999996654321111111 12233333333332 554333334444443 2337999999999998
Q ss_pred Hh-hhcCChHHHHHHHHHHH
Q 017434 317 FS-LAVDGEAGVRKVLQMLR 335 (371)
Q Consensus 317 ~~-~~~~G~~gv~~~l~~l~ 335 (371)
+. . .++++.++++.+.
T Consensus 103 ~~~~---s~~~l~~~f~~va 119 (288)
T 2nuw_A 103 FPRL---PEKFLAKYYEEIA 119 (288)
T ss_dssp SCSC---CHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHH
Confidence 74 2 4566655555443
No 478
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=88.64 E-value=1.6 Score=41.95 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=34.1
Q ss_pred CHHHHHHHHhhc--CCCEEEEE-ccCHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTIT--SLPILVKG-VLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~--~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs 256 (371)
+++.+.++++.+ ++||+.=+ +.+.+|+.+++.+|||+|.+.
T Consensus 270 ~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 270 SFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 567778888776 68988765 688999999999999999984
No 479
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.53 E-value=2.3 Score=39.56 Aligned_cols=93 Identities=18% Similarity=0.226 Sum_probs=60.6
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-Cc----CCCCccchHHH-HHHHHHHhc-CCCcEEEec--
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-AR----QLDYVPATVMA-LEEVVQAAK-GRVPVFLDG-- 290 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-g~----~~~~~~~~~~~-l~~i~~~~~-~~i~via~G-- 290 (371)
++.+++. +-|+++-++.+.-.|+.+.++|+|+|.+++.+ +. .-|.++-+++. +..++...+ .++||++|.
T Consensus 13 lr~l~~~-~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~ 91 (287)
T 3b8i_A 13 FRALLDS-SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADH 91 (287)
T ss_dssp HHHHHHS-SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4444432 56888888889999999999999999998642 10 13444445543 333322222 278999987
Q ss_pred CCCCHHHHH----HHHHcCCCEEEEch
Q 017434 291 GVRRGTDVF----KALALGASGVFVGR 313 (371)
Q Consensus 291 GI~~~~dv~----kal~lGAd~V~iGr 313 (371)
|..++.++. +.+.+||++|.|=-
T Consensus 92 Gyg~~~~~~~~v~~l~~aGa~gv~iED 118 (287)
T 3b8i_A 92 GYGNALNVMRTVVELERAGIAALTIED 118 (287)
T ss_dssp CSSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEcC
Confidence 455666554 45558999998843
No 480
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=88.49 E-value=5.6 Score=37.24 Aligned_cols=90 Identities=19% Similarity=0.178 Sum_probs=60.2
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-----CcCCCCccchHH----HHHHHHHHhcCCCcEEEec
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-----ARQLDYVPATVM----ALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-----g~~~~~~~~~~~----~l~~i~~~~~~~i~via~G 290 (371)
++++++. +-|+++-++.+.-.|+.+.++|+|+|.+++.+ | .-|.++-+++ .+..|.+.. ++||++|.
T Consensus 21 lr~l~~~-~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G-~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~ 96 (305)
T 3ih1_A 21 FRALVEA-NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKG-LPDLGIVTSTEVAERARDLVRAT--DLPVLVDI 96 (305)
T ss_dssp HHHHHHS-SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHT-CCSSSCSCHHHHHHHHHHHHHHH--CCCEEEEC
T ss_pred HHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCC-CCCCCcCCHHHHHHHHHHHHHhc--CCCEEEEC
Confidence 4444432 56888888888889999999999999998621 1 1234443433 345555555 68999988
Q ss_pred --CCCCHHHHH----HHHHcCCCEEEEch
Q 017434 291 --GVRRGTDVF----KALALGASGVFVGR 313 (371)
Q Consensus 291 --GI~~~~dv~----kal~lGAd~V~iGr 313 (371)
|..++.++. +....||++|.|=-
T Consensus 97 d~Gyg~~~~v~~~v~~l~~aGaagv~iED 125 (305)
T 3ih1_A 97 DTGFGGVLNVARTAVEMVEAKVAAVQIED 125 (305)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEECC
Confidence 444555544 34458999997754
No 481
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=88.40 E-value=2 Score=41.50 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=33.6
Q ss_pred HHHHHHHhhcCCCEEEEEccCHHHHHHHHHhC-CCEEEEe
Q 017434 218 KDVKWLQTITSLPILVKGVLTAEDASLAIQYG-AAGIIVS 256 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~G-ad~I~vs 256 (371)
+ ++++|+.+++||+.-+..++++++.+++.| +|.|.+.
T Consensus 298 ~-~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 298 V-VAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFG 336 (379)
T ss_dssp H-HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred H-HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCCeEEEec
Confidence 6 889999999999988766999999999998 9999883
No 482
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=88.28 E-value=5.6 Score=38.17 Aligned_cols=89 Identities=13% Similarity=0.084 Sum_probs=64.8
Q ss_pred CHHHHHHHHhhcC--CCEEEEE--ccCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTITS--LPILVKG--VLTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~--~pv~vK~--v~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++.+|+.++ .++.+.. ..++++| +.+.+.|+..|- -...+..++.+.++++.. .+||+
T Consensus 179 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE--------eP~~~~d~~~~~~l~~~~--~ipIa 248 (381)
T 3fcp_A 179 DLRHTRAIVEALGDRASIRVDVNQAWDAATGAKGCRELAAMGVDLIE--------QPVSAHDNAALVRLSQQI--ETAIL 248 (381)
T ss_dssp HHHHHHHHHHHTCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCSEEE--------CCBCTTCHHHHHHHHHHS--SSEEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHhhcCcccee--------CCCCcccHHHHHHHHHhC--CCCEE
Confidence 3567888998873 5676664 2456654 445677777663 112234678888888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchh
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGRP 314 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr~ 314 (371)
++-.+.+..|+.+++..| +|.|++--.
T Consensus 249 ~dE~~~~~~~~~~~~~~~a~d~v~~k~~ 276 (381)
T 3fcp_A 249 ADEAVATAYDGYQLAQQGFTGAYALKIA 276 (381)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred ECCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 999999999999999986 899988543
No 483
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=88.28 E-value=6.8 Score=36.07 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=61.8
Q ss_pred CHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc----CCCCccchHHH----HHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR----QLDYVPATVMA----LEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~----~~~~~~~~~~~----l~~i~~~~~~~i~vi 287 (371)
+...++.+++. +-|+++-...+.-.|+.+.++|+|.|.++...+. .-|..+-+++. ...+++.. ...+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vv 82 (275)
T 1o66_A 5 TVNTLQKMKAA-GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIV 82 (275)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEE
T ss_pred CHHHHHHHHhC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEE
Confidence 44556666543 5688888888899999999999999976432121 12344445543 33334433 245788
Q ss_pred EecCC----CCHHHHH----HHHHcCCCEEEE
Q 017434 288 LDGGV----RRGTDVF----KALALGASGVFV 311 (371)
Q Consensus 288 a~GGI----~~~~dv~----kal~lGAd~V~i 311 (371)
+|=+. .++++++ +.+..||++|-+
T Consensus 83 aD~pfgsy~~s~~~a~~na~rl~kaGa~aVkl 114 (275)
T 1o66_A 83 SDLPFGAYQQSKEQAFAAAAELMAAGAHMVKL 114 (275)
T ss_dssp EECCTTSSSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EECCCCCccCCHHHHHHHHHHHHHcCCcEEEE
Confidence 99555 3577776 577799999988
No 484
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=88.02 E-value=1.1 Score=44.96 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=50.9
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 017434 239 AEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGR 313 (371)
Q Consensus 239 ~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr 313 (371)
.+.++.+.++|++.+.+....|. ....++.+..+++..++++||+ .|+|.+.+++.++..+|||++.+|.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~----~~~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGF----SEWQKITIGWIREKYGDKVKVG-AGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCC----SHHHHHHHHHHHHHHGGGSCEE-EEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhhhccceEEecccCc----ccchhhHHHHHHHhCCCCceEe-eccccCHHHHHHHHHhCCCeEEecc
Confidence 34577888999999988533221 1224566777777653227887 4889999999999999999998864
No 485
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.00 E-value=17 Score=33.91 Aligned_cols=183 Identities=12% Similarity=0.084 Sum_probs=104.5
Q ss_pred cceeecccc-cccccCChHhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHh-------cc-CC-CceEEEEeecCChH
Q 017434 75 MPIMIAPTA-FQKMAHPEGECATARAASAAGTIMTL--S---SWATSSVEEVS-------ST-GP-GIRFFQLYVTKHRN 139 (371)
Q Consensus 75 ~Pi~iAPm~-~~~~~~~~~e~~~a~aa~~~G~~~~~--s---~~~~~~~eei~-------~~-~~-~~~~~QLy~~~d~~ 139 (371)
.|-++.|+. -.+-.+.++-..+.+-..+.|+...+ + ++.+.+.+|-. +. .+ -|.++..- ..+.+
T Consensus 15 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~ 93 (318)
T 3qfe_A 15 WCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTR 93 (318)
T ss_dssp EEECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHH
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHH
Confidence 345566664 23333444445677777788886443 2 23445665532 22 22 46676654 35677
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCCHHH
Q 017434 140 VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKD 219 (371)
Q Consensus 140 ~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (371)
...++.+.|+++|++++.+. .|.+ +.-|. ...-..+.
T Consensus 94 ~ai~la~~a~~~Gadavlv~--~P~y----------~~kp~-------------------------------~~~~l~~~ 130 (318)
T 3qfe_A 94 QVLEHINDASVAGANYVLVL--PPAY----------FGKAT-------------------------------TPPVIKSF 130 (318)
T ss_dssp HHHHHHHHHHHHTCSEEEEC--CCCC-------------CC-------------------------------CHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEe--CCcc----------cCCCC-------------------------------CHHHHHHH
Confidence 77889999999999999863 3321 00000 00012345
Q ss_pred HHHHHhhcCCCEEEEEc--------cCHHHHHHHHH-h-CCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc-CCCcEEE
Q 017434 220 VKWLQTITSLPILVKGV--------LTAEDASLAIQ-Y-GAAGIIVSNHGARQLDYVPATVMALEEVVQAAK-GRVPVFL 288 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v--------~~~e~a~~a~~-~-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~i~via 288 (371)
.+.|.+.+++||++=.+ .+++...++.+ . .+-+|+-+. .++..+.++.+.++ ++..|+.
T Consensus 131 f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~f~v~~ 200 (318)
T 3qfe_A 131 FDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVVGVKLTC----------ASVGKITRLAATLPPAAFSVFG 200 (318)
T ss_dssp HHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEEEEEESS----------CCHHHHHHHHHHSCGGGCEEEE
T ss_pred HHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCEEEEE
Confidence 67777778999988754 35677777765 3 233333321 13445555555542 2444443
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 289 DGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
| - ...++.++.+|++++.-+..-
T Consensus 201 -G-~--d~~~l~~l~~G~~G~is~~an 223 (318)
T 3qfe_A 201 -G-Q--SDFLIGGLSVGSAGCIAAFAN 223 (318)
T ss_dssp -S-C--GGGHHHHHHTTCCEEECGGGG
T ss_pred -e-c--HHHHHHHHHCCCCEEEecHHH
Confidence 3 2 345778999999999988753
No 486
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=87.94 E-value=2.5 Score=39.11 Aligned_cols=98 Identities=16% Similarity=0.234 Sum_probs=57.6
Q ss_pred CHHHHHHHHhhcCCCEEEEEcc--CHHHH----HHHHHhCCCEEEEeCCCCcCCCCcc--chHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTITSLPILVKGVL--TAEDA----SLAIQYGAAGIIVSNHGARQLDYVP--ATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~--~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++++ ..++.||++|..+ ++++. ..+...|.+-+.+--.|++. .... ..+..++.+++... .+||+
T Consensus 118 n~~ll~~~-a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~~~~~dl~~i~~lk~~~~-~~pV~ 194 (280)
T 2qkf_A 118 QTDLVVAM-AKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF-GYDNLVVDMLGFGVMKQTCG-NLPVI 194 (280)
T ss_dssp BHHHHHHH-HHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHTT-TCCEE
T ss_pred CHHHHHHH-HcCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHHhCC-CCCEE
Confidence 44567777 4679999999763 56654 44456787666665444421 1111 24456677766542 47999
Q ss_pred Ee-----------cCCCCH-----HH-HHHHHHcCCCEEEEchhHH
Q 017434 288 LD-----------GGVRRG-----TD-VFKALALGASGVFVGRPVP 316 (371)
Q Consensus 288 a~-----------GGI~~~-----~d-v~kal~lGAd~V~iGr~~l 316 (371)
.| ||-..+ .. ...++++||+++||=+-+-
T Consensus 195 ~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 195 FDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPD 240 (280)
T ss_dssp EEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC---
T ss_pred EECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCC
Confidence 96 333334 22 3456679999999998764
No 487
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=87.93 E-value=3.1 Score=38.98 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=60.7
Q ss_pred HHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCC-c----CCCCccchHHH-HHHHHHHhc--CCCcEEEec
Q 017434 219 DVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGA-R----QLDYVPATVMA-LEEVVQAAK--GRVPVFLDG 290 (371)
Q Consensus 219 ~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg-~----~~~~~~~~~~~-l~~i~~~~~--~~i~via~G 290 (371)
.++++.+.-+.|+++-++.+.-.|+.+.++|+|+|.+|+.+- . .-|.++-+++. +..++...+ .++||++|.
T Consensus 8 ~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~ 87 (302)
T 3fa4_A 8 SLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADA 87 (302)
T ss_dssp HHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEEC
T ss_pred HHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEEC
Confidence 355555443467888888899999999999999999975311 0 12444444443 333332222 278999998
Q ss_pred --CCCCHHHHH----HHHHcCCCEEEEch
Q 017434 291 --GVRRGTDVF----KALALGASGVFVGR 313 (371)
Q Consensus 291 --GI~~~~dv~----kal~lGAd~V~iGr 313 (371)
|..++.++. +....||.+|.|=-
T Consensus 88 d~Gyg~~~~v~~tv~~l~~aGaagv~iED 116 (302)
T 3fa4_A 88 DTGYGGPIMVARTTEQYSRSGVAAFHIED 116 (302)
T ss_dssp TTTTSSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 444555443 44558999998754
No 488
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=87.93 E-value=1.6 Score=40.53 Aligned_cols=95 Identities=19% Similarity=0.239 Sum_probs=59.0
Q ss_pred CHHHHHHHHhhcCCCEEEEEcc--CHHH----HHHHHHhCC------CEEEEeCCCCcCCCCc--cchHHHHHHHHHHhc
Q 017434 216 NWKDVKWLQTITSLPILVKGVL--TAED----ASLAIQYGA------AGIIVSNHGARQLDYV--PATVMALEEVVQAAK 281 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~--~~e~----a~~a~~~Ga------d~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~ 281 (371)
+.+.++++. .++.||++|..+ +++| ++.+.+.|. +-|++--.| ...... ...+..++.+++ .
T Consensus 120 n~~LLr~~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg-~~y~~~~~~vdl~~i~~lk~-~- 195 (288)
T 3tml_A 120 QTDFIHACA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERG-VSFGYNNLVSDMRSLAIMRE-T- 195 (288)
T ss_dssp CHHHHHHHH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECC-EECSSSCEECCHHHHHHGGG-G-
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCC-CCCCCCcCcCCHHHHHHHHh-c-
Confidence 344566654 568999999763 6655 445566776 666664322 211111 125777887776 5
Q ss_pred CCCcEEEe---------------cCCCCHH--HHHHHHHcCCCEEEEchhH
Q 017434 282 GRVPVFLD---------------GGVRRGT--DVFKALALGASGVFVGRPV 315 (371)
Q Consensus 282 ~~i~via~---------------GGI~~~~--dv~kal~lGAd~V~iGr~~ 315 (371)
.+||+.| ||-|.-- -...|+++|||+++|=+.+
T Consensus 196 -~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~ 245 (288)
T 3tml_A 196 -NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHP 245 (288)
T ss_dssp -SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEES
T ss_pred -CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeecc
Confidence 6899986 4444322 3457888999999998754
No 489
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=87.86 E-value=0.45 Score=43.02 Aligned_cols=41 Identities=24% Similarity=0.220 Sum_probs=36.5
Q ss_pred CHHHHHHHHhhc-CCCEEEEE-ccCHHHHHHHHHhCCCEEEEeC
Q 017434 216 NWKDVKWLQTIT-SLPILVKG-VLTAEDASLAIQYGAAGIIVSN 257 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~-v~~~e~a~~a~~~Gad~I~vs~ 257 (371)
..+.++++++.+ ++|+.+.+ +.++|+++.+.+ |||+|+|.+
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGS 219 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGN 219 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEECh
Confidence 568899999999 99999996 689999999999 999999953
No 490
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=87.85 E-value=1.9 Score=39.32 Aligned_cols=72 Identities=14% Similarity=0.281 Sum_probs=52.7
Q ss_pred CHHHHHHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchhH
Q 017434 238 TAEDASLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALGASGVFVGRPV 315 (371)
Q Consensus 238 ~~e~a~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via~GGI~~~~dv~kal~lGAd~V~iGr~~ 315 (371)
++.+..+..++||++|.|-+-.. .-..+++.|..+++.+ ++||+.-==|-++.++.++.++|||+|.+=-.+
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd~~----~F~Gs~~~L~~vr~~v--~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~ 136 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTEEK----YFNGSYETLRKIASSV--SIPILMSDFIVKESQIDDAYNLGADTVLLIVKI 136 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECCST----TTCCCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGG
T ss_pred CHHHHHHHHhCCCeEEEEeCCCC----CCCCCHHHHHHHHHhc--CCCEeeccccccHHHHHHHHHcCCCeeehHHhh
Confidence 44444456789999999854211 1122457778887777 799999888999999999999999999764433
No 491
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=87.83 E-value=6.8 Score=36.87 Aligned_cols=91 Identities=26% Similarity=0.296 Sum_probs=61.1
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-C-c---CCCCccchHH----HHHHHHHHhcCCCcEEEec
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-A-R---QLDYVPATVM----ALEEVVQAAKGRVPVFLDG 290 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-g-~---~~~~~~~~~~----~l~~i~~~~~~~i~via~G 290 (371)
++.+.+. +-|+++-++.+.-.|+.+.++|+|+|.+++.+ + . .-|.++-+++ .+..|.+.++ ++||++|.
T Consensus 31 lr~l~~~-~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~~PviaD~ 108 (318)
T 1zlp_A 31 MHRLIEE-HGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP-NLCVVVDG 108 (318)
T ss_dssp HHHHHHH-SSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS-SSEEEEEC
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc-CCCEEEeC
Confidence 4444432 56888888899999999999999999998631 1 0 1234444443 3444444443 69999998
Q ss_pred --CCCCHHHHH----HHHHcCCCEEEEc
Q 017434 291 --GVRRGTDVF----KALALGASGVFVG 312 (371)
Q Consensus 291 --GI~~~~dv~----kal~lGAd~V~iG 312 (371)
|..++.++. +.+..||.+|.|=
T Consensus 109 d~Gyg~~~~v~~tv~~l~~aGaagv~iE 136 (318)
T 1zlp_A 109 DTGGGGPLNVQRFIRELISAGAKGVFLE 136 (318)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 444655554 4556899999883
No 492
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=87.69 E-value=6.8 Score=35.88 Aligned_cols=94 Identities=15% Similarity=0.064 Sum_probs=63.0
Q ss_pred CHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCCCc----CCCCccchHHH----HHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHGAR----QLDYVPATVMA----LEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~gg~----~~~~~~~~~~~----l~~i~~~~~~~i~vi 287 (371)
+...++.+++. +-|+++-...+.-.|+.+.++|+|.|.++...+. .-|..+-+++. ...+++.. ...+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vv 82 (264)
T 1m3u_A 5 TISLLQKYKQE-KKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLL 82 (264)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEE
T ss_pred CHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEE
Confidence 44556666543 5688888888899999999999999998432121 12344445543 33333433 245788
Q ss_pred EecCCC---CHHHHH----HHHHcCCCEEEE
Q 017434 288 LDGGVR---RGTDVF----KALALGASGVFV 311 (371)
Q Consensus 288 a~GGI~---~~~dv~----kal~lGAd~V~i 311 (371)
+|=+.- ++++++ +.+..||++|-+
T Consensus 83 aD~pfgsy~~~~~a~~~a~rl~kaGa~aVkl 113 (264)
T 1m3u_A 83 ADLPFMAYATPEQAFENAATVMRAGANMVKI 113 (264)
T ss_dssp EECCTTSSSSHHHHHHHHHHHHHTTCSEEEC
T ss_pred EECCCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 887775 777777 477789999988
No 493
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.58 E-value=1.1 Score=43.07 Aligned_cols=82 Identities=13% Similarity=0.068 Sum_probs=54.2
Q ss_pred CCCEEEEE--ccCHHHHHHHH-HhCCCEEEEeCCCCc--CCCCccc---hH-HHHHHHHHHhcCCCcEEEecCC---CCH
Q 017434 228 SLPILVKG--VLTAEDASLAI-QYGAAGIIVSNHGAR--QLDYVPA---TV-MALEEVVQAAKGRVPVFLDGGV---RRG 295 (371)
Q Consensus 228 ~~pv~vK~--v~~~e~a~~a~-~~Gad~I~vs~~gg~--~~~~~~~---~~-~~l~~i~~~~~~~i~via~GGI---~~~ 295 (371)
+.|++.=+ ..+.+++.++. ..|+|++.++-.... ....+.. .+ +.+.++++.. ++||++-+ | .+.
T Consensus 144 ~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~-vg~g~s~ 220 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKE-VGFGMDV 220 (365)
T ss_dssp -CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEE-CSSCCCH
T ss_pred CCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEE-CCCCCCH
Confidence 45554322 23566665555 889999998632110 0111112 23 6788888876 79999985 6 789
Q ss_pred HHHHHHHHcCCCEEEEc
Q 017434 296 TDVFKALALGASGVFVG 312 (371)
Q Consensus 296 ~dv~kal~lGAd~V~iG 312 (371)
+++.++.++|||+|.++
T Consensus 221 e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 99999999999999984
No 494
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=87.55 E-value=2.7 Score=39.19 Aligned_cols=91 Identities=22% Similarity=0.205 Sum_probs=57.3
Q ss_pred HHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-CcC---CCCccchHH----HHHHHHHHhcCCCcEEEec-
Q 017434 220 VKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-ARQ---LDYVPATVM----ALEEVVQAAKGRVPVFLDG- 290 (371)
Q Consensus 220 i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-g~~---~~~~~~~~~----~l~~i~~~~~~~i~via~G- 290 (371)
++.+.+ .+-|+++-++.+.-.|+.+.++|+|+|.+|+.+ +.. -|.++-+++ .+..|.+.. ++||++|.
T Consensus 11 lr~l~~-~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d 87 (295)
T 1s2w_A 11 LKQMLN-SKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDAD 87 (295)
T ss_dssp HHHHHH-SSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEECC
T ss_pred HHHHHh-CCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecCC
Confidence 444443 256898888899999999999999999998631 111 122322332 233344433 78999997
Q ss_pred -CCCCHHHHH----HHHHcCCCEEEEch
Q 017434 291 -GVRRGTDVF----KALALGASGVFVGR 313 (371)
Q Consensus 291 -GI~~~~dv~----kal~lGAd~V~iGr 313 (371)
|..+..++. +.+..||.+|.|=-
T Consensus 88 ~Gyg~~~~v~~~v~~l~~aGaagv~iED 115 (295)
T 1s2w_A 88 TGYGNFNNARRLVRKLEDRGVAGACLED 115 (295)
T ss_dssp SSCSSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 455555543 45568999998743
No 495
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=87.54 E-value=2.1 Score=39.84 Aligned_cols=98 Identities=22% Similarity=0.301 Sum_probs=59.5
Q ss_pred CHHHHHHHHhhcCCCEEEEEcc--CHHHH----HHHHHhCCCEEEEeCCCCcCCCCcc--chHHHHHHHHHHhcCCCcEE
Q 017434 216 NWKDVKWLQTITSLPILVKGVL--TAEDA----SLAIQYGAAGIIVSNHGARQLDYVP--ATVMALEEVVQAAKGRVPVF 287 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~--~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~i~vi 287 (371)
+.+.++++. .++.||++|..+ ++++. +.+...|.+-+.+--.|++. .... ..+..++.+++... .+||+
T Consensus 121 n~~Ll~~~a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~-~y~~~~~dl~~i~~lk~~~~-~~pV~ 197 (292)
T 1o60_A 121 QTDLVEAMA-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNF-GYDNLIVDMLGFSVMKKASK-GSPVI 197 (292)
T ss_dssp CHHHHHHHH-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHTT-SCCEE
T ss_pred CHHHHHHHH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHhhCC-CCCEE
Confidence 445677776 579999999753 56654 44456788666665444421 1111 25556666666542 47999
Q ss_pred Eec-----------CCCCH-----HHH-HHHHHcCCCEEEEchhHH
Q 017434 288 LDG-----------GVRRG-----TDV-FKALALGASGVFVGRPVP 316 (371)
Q Consensus 288 a~G-----------GI~~~-----~dv-~kal~lGAd~V~iGr~~l 316 (371)
.|. +-..+ ..+ ..++++||+++||=+-+-
T Consensus 198 ~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~ 243 (292)
T 1o60_A 198 FDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHPN 243 (292)
T ss_dssp EEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEESS
T ss_pred EECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecCC
Confidence 943 22233 233 366789999999998653
No 496
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=87.36 E-value=6.7 Score=35.81 Aligned_cols=76 Identities=20% Similarity=0.129 Sum_probs=50.2
Q ss_pred HHHHHHHHhCCCEEEEeCCCCcCCCCc-cchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHH----cCCCEEEEch
Q 017434 240 EDASLAIQYGAAGIIVSNHGARQLDYV-PATVMALEEVVQAAKG-RVPVFLDGGVRRGTDVFKALA----LGASGVFVGR 313 (371)
Q Consensus 240 e~a~~a~~~Gad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~-~i~via~GGI~~~~dv~kal~----lGAd~V~iGr 313 (371)
.+++.|++.|||-|.+.-.-|.-.++. ....+.+..++++.++ .+.||..-|.-+.+++.++-. +|||+|=..+
T Consensus 115 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST 194 (260)
T 3r12_A 115 HEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTST 194 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCC
Confidence 567889999999999753211111111 1233456666666643 367888888878888887544 6999998887
Q ss_pred hH
Q 017434 314 PV 315 (371)
Q Consensus 314 ~~ 315 (371)
-|
T Consensus 195 Gf 196 (260)
T 3r12_A 195 GF 196 (260)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 497
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=87.27 E-value=4.2 Score=38.15 Aligned_cols=96 Identities=21% Similarity=0.220 Sum_probs=61.3
Q ss_pred HHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEeCCC-Cc----CCCCccchHHH-HHHHHHHhcC---CCcEEE
Q 017434 218 KDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVSNHG-AR----QLDYVPATVMA-LEEVVQAAKG---RVPVFL 288 (371)
Q Consensus 218 ~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs~~g-g~----~~~~~~~~~~~-l~~i~~~~~~---~i~via 288 (371)
+.++++.+.-+.|+++-++.+.-.|+.+.++|+|+|.+|+.+ +. .-|.++-+++. +..++...+. ++||++
T Consensus 14 ~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~Pvia 93 (307)
T 3lye_A 14 KKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIA 93 (307)
T ss_dssp HHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEE
T ss_pred HHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEE
Confidence 445555554346888888889999999999999999997531 10 13445545543 3333322221 489999
Q ss_pred ec--CCCCHHHHH----HHHHcCCCEEEEch
Q 017434 289 DG--GVRRGTDVF----KALALGASGVFVGR 313 (371)
Q Consensus 289 ~G--GI~~~~dv~----kal~lGAd~V~iGr 313 (371)
|. |..++.++. +....||.+|.|=-
T Consensus 94 D~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 124 (307)
T 3lye_A 94 DMDTGYGGPIMVARTVEHYIRSGVAGAHLED 124 (307)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ECCCCCCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 98 444555443 44558999998754
No 498
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=87.17 E-value=6.5 Score=38.68 Aligned_cols=120 Identities=10% Similarity=0.094 Sum_probs=82.1
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCCC
Q 017434 137 HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN 216 (371)
Q Consensus 137 d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (371)
+++.+.+.++++.+.||+++-+.++. ++..+
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~-------------------------------------------------~~~~d 231 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGA-------------------------------------------------DLQDD 231 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSS-------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCC-------------------------------------------------CHHHH
Confidence 67777888888888999998765431 01123
Q ss_pred HHHHHHHHhhc--CCCEEEEE--ccCHHHH----HHHHHhCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhc-CCCcEE
Q 017434 217 WKDVKWLQTIT--SLPILVKG--VLTAEDA----SLAIQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAK-GRVPVF 287 (371)
Q Consensus 217 ~~~i~~ir~~~--~~pv~vK~--v~~~e~a----~~a~~~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~i~vi 287 (371)
.+.++.+|+.+ +.++.+-. ..++++| +.+.+.+...|- -...+..++.+.++++.+. ..+||.
T Consensus 232 ~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~~iE--------eP~~~~d~~~~~~l~~~l~~~~iPIa 303 (441)
T 4a35_A 232 MRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIE--------EPTSPDDILGHATISKALVPLGIGIA 303 (441)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE--------CCSCTTCHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHhhcccCccEEe--------CCCCcccHHHHHHHHHhccCCCCCEE
Confidence 46688888886 46677664 2456664 344455665552 1122345677888887632 269999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 288 LDGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 288 a~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
++--+.+..|+.+++..| +|.|++--
T Consensus 304 ~gE~~~~~~~~~~~l~~~a~div~~d~ 330 (441)
T 4a35_A 304 TGEQCHNRVIFKQLLQAKALQFLQIDS 330 (441)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCT
T ss_pred eCCccccHHHHHHHHHcCCCCEEEECc
Confidence 999999999999999987 78888743
No 499
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=87.06 E-value=13 Score=35.37 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=78.2
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.+++.+.+.++++.+.|++++-+.++.. ++..
T Consensus 142 ~~~e~~~~~a~~~~~~G~~~iK~Kvg~~------------------------------------------------~~~~ 173 (365)
T 3ik4_A 142 GDEVHAAASAKAILARGIKSIKVKTAGV------------------------------------------------DVAY 173 (365)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCC------------------------------------------------CHHH
Confidence 5777777777777788999887654311 0112
Q ss_pred CHHHHHHHHhhc-CCCEEEEE--ccCHHHHHHHH-H---hCCCEEEEeCCCCcCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017434 216 NWKDVKWLQTIT-SLPILVKG--VLTAEDASLAI-Q---YGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFL 288 (371)
Q Consensus 216 ~~~~i~~ir~~~-~~pv~vK~--v~~~e~a~~a~-~---~Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~via 288 (371)
+.+.++.+|+.+ +.++.+-. ..++++|.+.. . ...+...+= -...+..++.+.++++.. .+||.+
T Consensus 174 d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~i~~iE------eP~~~~d~~~~~~l~~~~--~ipIa~ 245 (365)
T 3ik4_A 174 DLARLRAIHQAAPTAPLIVDGNCGYDVERALAFCAACKAESIPMVLFE------QPLPREDWAGMAQVTAQS--GFAVAA 245 (365)
T ss_dssp HHHHHHHHHHHSSSCCEEEECTTCCCHHHHHHHHHHHHHTTCCEEEEE------CCSCTTCHHHHHHHHHHS--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCceEEE------CCCCcccHHHHHHHHhhC--CCCEEE
Confidence 346678888876 34554442 24566653321 1 222222221 112233677888888876 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 017434 289 DGGVRRGTDVFKALALG-ASGVFVGR 313 (371)
Q Consensus 289 ~GGI~~~~dv~kal~lG-Ad~V~iGr 313 (371)
+--+.+..|+.+++..| +|.|++--
T Consensus 246 dE~~~~~~~~~~~i~~~a~d~v~ik~ 271 (365)
T 3ik4_A 246 DESARSAHDVLRIAREGTASVINIKL 271 (365)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEEECH
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEEcC
Confidence 99999999999999987 78888753
No 500
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=86.89 E-value=2.6 Score=40.31 Aligned_cols=70 Identities=16% Similarity=0.258 Sum_probs=55.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEecCCCCCcchhHHhhhhcCCCCccccccccccccCCCCCCCcchhhhHhhhhcccCC
Q 017434 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (371)
Q Consensus 136 ~d~~~~~~~~~~a~~aG~~al~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (371)
.|.+.+.+.+++.+++|++.+-+++... .
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~---------------------------------------------------~ 71 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHK---------------------------------------------------E 71 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSH---------------------------------------------------H
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCCh---------------------------------------------------H
Confidence 5667777888888999999988765210 0
Q ss_pred CHHHHHHHHhhcCCCEEEEEccCHHHHHHHHHhCCCEEEEe
Q 017434 216 NWKDVKWLQTITSLPILVKGVLTAEDASLAIQYGAAGIIVS 256 (371)
Q Consensus 216 ~~~~i~~ir~~~~~pv~vK~v~~~e~a~~a~~~Gad~I~vs 256 (371)
..+.++.+++.+++|++.=.-+++..|..++++|+|.+.+.
T Consensus 72 ~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRIN 112 (366)
T 3noy_A 72 DVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRIN 112 (366)
T ss_dssp HHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEEC
Confidence 23568889999999998766689999999999999998873
Done!