Query 017437
Match_columns 371
No_of_seqs 97 out of 99
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 14:25:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017437.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017437hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hbt_A EGL nine homolog 1; pro 99.0 5.5E-10 1.9E-14 101.9 7.3 153 9-167 25-230 (247)
2 3dkq_A PKHD-type hydroxylase S 98.6 1.3E-07 4.3E-12 87.2 9.3 151 11-166 20-212 (243)
3 3itq_A Prolyl 4-hydroxylase, a 97.8 4.3E-05 1.5E-09 69.0 7.7 134 10-151 38-214 (216)
4 2jig_A Prolyl-4 hydroxylase; h 97.7 4.9E-05 1.7E-09 66.9 7.0 142 7-151 16-219 (224)
5 3kt7_A PKHD-type hydroxylase T 92.0 0.25 8.6E-06 51.8 7.0 37 118-154 195-233 (633)
6 3emr_A ECTD; double stranded b 59.5 7.4 0.00025 36.0 3.9 90 13-106 49-149 (310)
7 2a1x_A Phytanoyl-COA dioxygena 52.0 22 0.00075 31.8 5.6 89 13-106 37-148 (308)
8 2fct_A Syringomycin biosynthes 42.0 42 0.0014 30.0 5.8 87 13-106 24-122 (313)
9 3gja_A CYTC3; halogenase, beta 38.7 31 0.0011 31.9 4.6 86 13-106 26-121 (319)
10 3i3q_A Alpha-ketoglutarate-dep 36.3 2E+02 0.0067 25.7 9.2 20 127-146 174-200 (211)
11 2yqk_A Arginine-glutamic acid 25.8 14 0.00047 27.3 -0.1 26 245-270 27-60 (63)
No 1
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=98.99 E-value=5.5e-10 Score=101.91 Aligned_cols=153 Identities=15% Similarity=0.231 Sum_probs=86.9
Q ss_pred CCceEEecCccCHHHHHHHHHHHhhhccCC-CCCCCC---CCc-ccceee------cCC-Cc--cccccccchhHHHHHH
Q 017437 9 ERRRVIVRNILSKEECEELELIHKSCSTVG-YRPNVF---STT-LSHLIA------TNS-SH--FIVPFVPIRERLKEKV 74 (371)
Q Consensus 9 ~sqRVVlDGvlS~eEC~eL~~La~aaataG-YRp~t~---~~t-~~~l~a------~ga-~~--~lvp~~~vsEkvR~~v 74 (371)
+..++|+|+|||++||+.|...+......| |++... ... ...... .+. +. .+..|++.-++++..+
T Consensus 25 ~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~l 104 (247)
T 2hbt_A 25 KHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHC 104 (247)
T ss_dssp HTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccccccccccccccceeeecccccchhHHHHHHHHHHHHHHHH
Confidence 357899999999999999999988643333 442210 010 011100 000 00 0001233333443333
Q ss_pred HhhccCCCccee----eeecccccc-CcCCccccccCCcc---------cccc---------------cc--c--c----
Q 017437 75 EEFFGCEFELVI----EFTGLISWA-RGASIGWHCDDNRP---------YLKQ---------------RH--F--T---- 117 (371)
Q Consensus 75 EsYF~L~~~Lyf----SfTHLVcwC-RsASh~VHaDN~~P---------~~~~---------------RD--Y--S---- 117 (371)
... ..+|. +..|+.|.- .+....+|.|+.+. |++. .+ . +
T Consensus 105 n~~----lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~ 180 (247)
T 2hbt_A 105 NGK----LGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPK 180 (247)
T ss_dssp TTT----STTCCEEEECCEEEEEECSSSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCB
T ss_pred hhh----cCcccccccceEEEEEecCCCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcC
Confidence 222 24552 457888433 37778899998420 1221 11 1 1
Q ss_pred --ceeeeccCCCcccccccccccceeeEEEecccCCCchhHHHHHHHhhhhh
Q 017437 118 --DVAMYTADSRNVHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQKL 167 (371)
Q Consensus 118 --RlVgFSSG~ENpHGVkAVTkGqRCAlALWFTlDp~H~E~erll~~l~~~~ 167 (371)
|||.|.|+.+++|+|.+ +.|.|++|+.||+.++...+ .+.-..+++..
T Consensus 181 ~grlv~F~s~~~~~H~V~p-~~~~R~sit~W~~~~~~~~~-a~~~~~~~~~~ 230 (247)
T 2hbt_A 181 FDRLLFFWSDRRNPHEVQP-AYATRYAITVWYFDADERAR-AKVKYLTGEKG 230 (247)
T ss_dssp TTEEEEEECSTTCCEEECC-BSSCEEEEEEEEEEHHHHHH-HHHHCC---CC
T ss_pred CCEEEEEecCCCceeeecc-CCCEEEEEEEEEcCCchhhh-hhhhccccccc
Confidence 99999999889999999 67999999999998776544 33323334443
No 2
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=98.60 E-value=1.3e-07 Score=87.23 Aligned_cols=151 Identities=16% Similarity=0.285 Sum_probs=88.1
Q ss_pred ceEEecCccCHHHHHHHHHHHhhhccCCCCCCCCCCcccceeecCCCccc--ccc-ccchhHHHHHHHhh--c-cCCCcc
Q 017437 11 RRVIVRNILSKEECEELELIHKSCSTVGYRPNVFSTTLSHLIATNSSHFI--VPF-VPIRERLKEKVEEF--F-GCEFEL 84 (371)
Q Consensus 11 qRVVlDGvlS~eEC~eL~~La~aaataGYRp~t~~~t~~~l~a~ga~~~l--vp~-~~vsEkvR~~vEsY--F-~L~~~L 84 (371)
+=+++++|||++||++|+.++..+ +|.+-..........+.+..++. -|+ -.+.++++.++..- | ...-|+
T Consensus 20 ~i~~i~dvLs~~Ec~~li~~~e~~---~~~dg~~t~g~~~~~vr~n~~l~~d~~~~~~l~~~i~~~l~~~~~f~~~~L~~ 96 (243)
T 3dkq_A 20 MLIEIPNVFSKQEVSHLREQLDAR---RWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPL 96 (243)
T ss_dssp TBEEECCSSCHHHHHHHHHHHHTS---CCEEECCCSSBSSCCCEEEEECCTTCHHHHHHHHHHHHHHHTCHHHHHHHCEE
T ss_pred CEEEECCCCCHHHHHHHHHHHhhC---CCccCcccCCCccccceeeeEECCCCHHHHHHHHHHHHHHccCcchhhccccc
Confidence 447899999999999999998643 33311000000000000000100 011 23455555555443 1 111144
Q ss_pred eeeeeccccccCcCCccccccCCcccc----cccccc--------------------------------ceeeeccCCCc
Q 017437 85 VIEFTGLISWARGASIGWHCDDNRPYL----KQRHFT--------------------------------DVAMYTADSRN 128 (371)
Q Consensus 85 yfSfTHLVcwCRsASh~VHaDN~~P~~----~~RDYS--------------------------------RlVgFSSG~EN 128 (371)
...-.++...-.|.--+.|.|+..+.. ..|++| ++|.|.++ .
T Consensus 97 ~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s~--~ 174 (243)
T 3dkq_A 97 QFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPSS--S 174 (243)
T ss_dssp EEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEETT--S
T ss_pred ccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECCC--C
Confidence 444466664445666779999853211 123333 99999986 6
Q ss_pred ccccccccccceeeEEEecccCCCchhHHHHHHHhhhh
Q 017437 129 VHSVDEVTHGERLTLTLWFSRDSSHDEDAKLISILSQK 166 (371)
Q Consensus 129 pHGVkAVTkGqRCAlALWFTlDp~H~E~erll~~l~~~ 166 (371)
+|+|.+||+|.|.+++.||---.+-.++-.++=.|++.
T Consensus 175 lH~v~pV~~G~R~~~~~Wi~s~vr~~~~r~~l~~ld~~ 212 (243)
T 3dkq_A 175 LHQVTPVLSGERTAAFMWLQSMVRDEGQRRLLFQLDQS 212 (243)
T ss_dssp EEEECCEEEECEEEEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred eEcCccccccCEEEEEEehhhccCChhhhhhhcchHHH
Confidence 99999999999999999999666666666655555443
No 3
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=97.80 E-value=4.3e-05 Score=69.03 Aligned_cols=134 Identities=19% Similarity=0.286 Sum_probs=77.7
Q ss_pred Cce-EEecCccCHHHHHHHHHHHhhhc---cCCCCCCCCCCcccceeecCCCccccccccchhHHHHHHHhhccCCCcce
Q 017437 10 RRR-VIVRNILSKEECEELELIHKSCS---TVGYRPNVFSTTLSHLIATNSSHFIVPFVPIRERLKEKVEEFFGCEFELV 85 (371)
Q Consensus 10 sqR-VVlDGvlS~eEC~eL~~La~aaa---taGYRp~t~~~t~~~l~a~ga~~~lvp~~~vsEkvR~~vEsYF~L~~~Ly 85 (371)
.+| +++++|||++||+.|+.+++..- +.|.... ........... +.. -++-.++.+.+..+.+++.. +
T Consensus 38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~~~-----~~~~RtS~~~w-l~~-~~~v~~i~~Ri~~~~gl~~~-~ 109 (216)
T 3itq_A 38 EPLIVVLGNVLSDEECDELIELSKSKLARSKVGSSRD-----VNDIRTSSGAF-LDD-NELTAKIEKRISSIMNVPAS-H 109 (216)
T ss_dssp TTTEEEEESCSCHHHHHHHHHHHHHHHC--------C-----CCCGGGTTCEE-CCC-CHHHHHHHHHHHHHHTSCGG-G
T ss_pred CCCEEEECCcCCHHHHHHHHHHhhcccccceeccCCc-----cCCcEeeeeEE-eCC-cHHHHHHHHHHHHhcCceec-c
Confidence 344 48899999999999999997421 1122200 00000000011 111 24455666667777776432 2
Q ss_pred eeeeccccccCcCCccccccCCccc----ccccccc----------------------------ceeeecc-------CC
Q 017437 86 IEFTGLISWARGASIGWHCDDNRPY----LKQRHFT----------------------------DVAMYTA-------DS 126 (371)
Q Consensus 86 fSfTHLVcwCRsASh~VHaDN~~P~----~~~RDYS----------------------------RlVgFSS-------G~ 126 (371)
.+-.+++..-.+.--..|.|...+. ...|-++ ++|-|-+ +.
T Consensus 110 ~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~V~P~~G~al~f~~~~~~g~~d~ 189 (216)
T 3itq_A 110 GEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNE 189 (216)
T ss_dssp BCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTEEECCCTTCEEEEECCCSSHHHHH
T ss_pred ccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCCEEecCCCeEEEEeccCCCCCCCC
Confidence 2334444333444556899964321 1223333 8999987 34
Q ss_pred CcccccccccccceeeEEEecccCC
Q 017437 127 RNVHSVDEVTHGERLTLTLWFSRDS 151 (371)
Q Consensus 127 ENpHGVkAVTkGqRCAlALWFTlDp 151 (371)
..+|++.+|++|.|.+++.||-..|
T Consensus 190 ~~lH~~~PV~~G~K~v~~~W~~~~~ 214 (216)
T 3itq_A 190 LTLHGGAPVTKGEKWIATQWVRRGT 214 (216)
T ss_dssp TTCEEECCEEESCEEEEEEEEESSC
T ss_pred ccccccceeccccEEEEEeeEecCC
Confidence 7899999999999999999996544
No 4
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=97.74 E-value=4.9e-05 Score=66.90 Aligned_cols=142 Identities=18% Similarity=0.233 Sum_probs=79.3
Q ss_pred cCCCceE-EecCccCHHHHHHHHHHHhhhc---cCCCCCCCCCCcccceeecCCCccccc-cccchhHHHHHHHhhccCC
Q 017437 7 ESERRRV-IVRNILSKEECEELELIHKSCS---TVGYRPNVFSTTLSHLIATNSSHFIVP-FVPIRERLKEKVEEFFGCE 81 (371)
Q Consensus 7 ~~~sqRV-VlDGvlS~eEC~eL~~La~aaa---taGYRp~t~~~t~~~l~a~ga~~~lvp-~~~vsEkvR~~vEsYF~L~ 81 (371)
-+..+++ ++++|||++||+.|+.++.... +.+ ++.+............... +.. .-++.+++.+.|+.+..++
T Consensus 16 ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~-~~~~g~~~~~~~R~s~~~~-l~~~~~~~~~~i~~ri~~~~gl~ 93 (224)
T 2jig_A 16 LSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVV-DNESGKSVDSEIRTSTGTW-FAKGEDSVISKIEKRVAQVTMIP 93 (224)
T ss_dssp EETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEE-ETTTTEEEECSSBCSEEEE-CCTTCSHHHHHHHHHHHHHHTCC
T ss_pred EeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeee-cCCCCcccccCCEEEeeeE-ecCCCCHHHHHHHHHHHHHhCCC
Confidence 3445555 7999999999999999997411 110 0110000000000000000 000 1234567777777777764
Q ss_pred CcceeeeeccccccCcCCccccccCCcc------------------ccc---------c-c----------------ccc
Q 017437 82 FELVIEFTGLISWARGASIGWHCDDNRP------------------YLK---------Q-R----------------HFT 117 (371)
Q Consensus 82 ~~LyfSfTHLVcwCRsASh~VHaDN~~P------------------~~~---------~-R----------------DYS 117 (371)
... .+-.++++.-.+.--..|.|+-.+ |++ . . ..+
T Consensus 94 ~~~-~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 94 LEN-HEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp GGG-BCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ccc-ccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 322 233444433334445578884110 111 0 1 122
Q ss_pred ------ceeeecc-------CCCcccccccccccceeeEEEecccCC
Q 017437 118 ------DVAMYTA-------DSRNVHSVDEVTHGERLTLTLWFSRDS 151 (371)
Q Consensus 118 ------RlVgFSS-------G~ENpHGVkAVTkGqRCAlALWFTlDp 151 (371)
++|-|-+ +...+|+|.+|++|.|.++..|+-..|
T Consensus 173 V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~ 219 (224)
T 2jig_A 173 VKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAP 219 (224)
T ss_dssp ECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSC
T ss_pred EecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCC
Confidence 9999977 578999999999999999999997654
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=92.04 E-value=0.25 Score=51.82 Aligned_cols=37 Identities=19% Similarity=0.441 Sum_probs=32.6
Q ss_pred ceeeeccC-CCccccccccc-ccceeeEEEecccCCCch
Q 017437 118 DVAMYTAD-SRNVHSVDEVT-HGERLTLTLWFSRDSSHD 154 (371)
Q Consensus 118 RlVgFSSG-~ENpHGVkAVT-kGqRCAlALWFTlDp~H~ 154 (371)
|+|.|.+. +..+|||.+|+ ...|++|+.||-.....+
T Consensus 195 rLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~p~~~~ 233 (633)
T 3kt7_A 195 QIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHIPQVGE 233 (633)
T ss_dssp EEEEEECCTTTCCEEECCBCSSCCEEEEEEEEECCCTTS
T ss_pred eEEEEEcCCCCCcCCCCccCCCCCEEEEEEEeccCCCcc
Confidence 99999998 59999999998 788999999997766544
No 6
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=59.46 E-value=7.4 Score=35.97 Aligned_cols=90 Identities=13% Similarity=0.184 Sum_probs=51.2
Q ss_pred EEecCccCHHHHHHHHHHHhhhccC-CCCCCCCCCcc---cceeecCCCccccc-c--ccchhHHHHHHHhhccCCCcce
Q 017437 13 VIVRNILSKEECEELELIHKSCSTV-GYRPNVFSTTL---SHLIATNSSHFIVP-F--VPIRERLKEKVEEFFGCEFELV 85 (371)
Q Consensus 13 VVlDGvlS~eEC~eL~~La~aaata-GYRp~t~~~t~---~~l~a~ga~~~lvp-~--~~vsEkvR~~vEsYF~L~~~Ly 85 (371)
||+.|++|++||++|..-....... +..++...... ..+...-..+...| | +-..+++..+++.+++- +++
T Consensus 49 vvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~f~~l~~~p~l~~i~~~llG~--~~~ 126 (310)
T 3emr_A 49 LQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLGS--DVY 126 (310)
T ss_dssp EEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTTCCEEEEECHHHHCHHHHHHHTCHHHHHHHHHHHTS--CEE
T ss_pred EEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCCcceeEEeehhhccHHHHHHHhChHHHHHHHHHcCC--ceE
Confidence 6899999999999998766433222 33222110000 00100001111112 1 34578999999999974 677
Q ss_pred eeeeccccccCc----CCccccccC
Q 017437 86 IEFTGLISWARG----ASIGWHCDD 106 (371)
Q Consensus 86 fSfTHLVcwCRs----ASh~VHaDN 106 (371)
+..+++. ++. ...+||.|.
T Consensus 127 l~~s~~~--~k~p~~g~~~~wHqD~ 149 (310)
T 3emr_A 127 VHQSRIN--YKPGFKGKEFDWHSDF 149 (310)
T ss_dssp EEEEEEE--CCCTTCCCCEEEECHH
T ss_pred EEeeEEE--EcCCCCCCCCCcCCCC
Confidence 7777877 543 345699884
No 7
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=52.00 E-value=22 Score=31.80 Aligned_cols=89 Identities=13% Similarity=0.127 Sum_probs=47.8
Q ss_pred EEecCccCHHHHHHHHHHHhhhccCCCCCC-C---------CCCcccc---eeecCCCccccc-c--ccchhHHHHHHHh
Q 017437 13 VIVRNILSKEECEELELIHKSCSTVGYRPN-V---------FSTTLSH---LIATNSSHFIVP-F--VPIRERLKEKVEE 76 (371)
Q Consensus 13 VVlDGvlS~eEC~eL~~La~aaataGYRp~-t---------~~~t~~~---l~a~ga~~~lvp-~--~~vsEkvR~~vEs 76 (371)
||+.|++|++||++|..-..........+. . .+...+. +...+... ..| | +-.++++.++++.
T Consensus 37 vvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~l~~~~~~ 115 (308)
T 2a1x_A 37 LVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQ-EDKELFRYCTLPEILKYVEC 115 (308)
T ss_dssp EEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE-----EECCEEECCT-TSHHHHHHHHCHHHHHHHHH
T ss_pred EEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCchHHHHhhhhhhh-hCHHHHHHHhCHHHHHHHHH
Confidence 799999999999999876554322211110 0 0000010 00000000 011 1 2345788999999
Q ss_pred hccCCCcceeeeeccccccCcC-------CccccccC
Q 017437 77 FFGCEFELVIEFTGLISWARGA-------SIGWHCDD 106 (371)
Q Consensus 77 YF~L~~~LyfSfTHLVcwCRsA-------Sh~VHaDN 106 (371)
+++ .++++..+.++ ++.+ ..+||.|.
T Consensus 116 llG--~~~~~~~~~~~--~k~P~~g~~~~~~~wHqD~ 148 (308)
T 2a1x_A 116 FTG--PNIMAMHTMLI--NKPPDSGKKTSRHPLHQDL 148 (308)
T ss_dssp HHC--SSEEEEEEEEE--EECCC--------CCBCGG
T ss_pred hcC--CCcceecceEE--EcCCCCCCCccCCCCccCC
Confidence 997 35677777888 4422 15799886
No 8
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=41.98 E-value=42 Score=29.97 Aligned_cols=87 Identities=18% Similarity=0.155 Sum_probs=48.0
Q ss_pred EEecCccCHHHHHHHHH-HHhhhcc---CCCCCCCCCCccccee--ecCCCccccc-c--ccchhHHHHHHHhhccCCCc
Q 017437 13 VIVRNILSKEECEELEL-IHKSCST---VGYRPNVFSTTLSHLI--ATNSSHFIVP-F--VPIRERLKEKVEEFFGCEFE 83 (371)
Q Consensus 13 VVlDGvlS~eEC~eL~~-La~aaat---aGYRp~t~~~t~~~l~--a~ga~~~lvp-~--~~vsEkvR~~vEsYF~L~~~ 83 (371)
||+.|+++++||++|.. +...... ..|.+.. .+.+-. ..-..+...+ | +-..+++..+++..++ .+
T Consensus 24 vvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~llG--~~ 98 (313)
T 2fct_A 24 IGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLD---AISGGTNIANYDRHLDDDFLASHICRPEICDRVESILG--PN 98 (313)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCCCC---C----CGGGGBCGGGTCHHHHHHTTCHHHHHHHHHHHC--SC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHhccccccccccc---ccCCccchhccccccccHHHHHHHcChHHHHHHHHHcC--CC
Confidence 69999999999999974 3222211 1343210 011000 0000011111 1 3346888899999987 46
Q ss_pred ceeeeeccccccCc---CCccccccC
Q 017437 84 LVIEFTGLISWARG---ASIGWHCDD 106 (371)
Q Consensus 84 LyfSfTHLVcwCRs---ASh~VHaDN 106 (371)
+++..+.++ ++. ..-+||.|.
T Consensus 99 ~~~~~~~~~--~k~Pg~~~~~wHqD~ 122 (313)
T 2fct_A 99 VLCWRTEFF--PKYPGDEGTDWHQAD 122 (313)
T ss_dssp EEEEEEEEE--EECTTCCEECCBCCS
T ss_pred eEeeeeeEE--EeCCCCCCCCccccc
Confidence 777777888 542 225799885
No 9
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=38.75 E-value=31 Score=31.87 Aligned_cols=86 Identities=15% Similarity=0.179 Sum_probs=50.5
Q ss_pred EEecCccCHHHHHHHHHHHhhh-cc---CCCCCCCCCCcccceeecCCCccccc-c--ccchhHHHHHHHhhccCCCcce
Q 017437 13 VIVRNILSKEECEELELIHKSC-ST---VGYRPNVFSTTLSHLIATNSSHFIVP-F--VPIRERLKEKVEEFFGCEFELV 85 (371)
Q Consensus 13 VVlDGvlS~eEC~eL~~La~aa-at---aGYRp~t~~~t~~~l~a~ga~~~lvp-~--~~vsEkvR~~vEsYF~L~~~Ly 85 (371)
++++++++++||++|..-.... .. .-|.+.. ..+ +...-..+...| | +-..+++..+++..++ .+++
T Consensus 26 v~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~~~~-g~~---~~~~~~~~~~~~~f~~l~~~p~l~~~~~~llG--~~~~ 99 (319)
T 3gja_A 26 IGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSN-GKA---NISNYDRHLDIDLLAEHIMRPEIVDRVGSLIG--RNLL 99 (319)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHHCCTTCSSCSCS-SHH---HHTTTTGGGTCHHHHHHHHCHHHHHHHHHHHC--SSEE
T ss_pred EECcCCCCHHHHHHHHHHHHHHhhcCccccccCCC-ccc---hhhhhhhcccCHHHHHHHcChHHHHHHHHHcC--CceE
Confidence 6899999999999997665432 11 1233310 000 000001111112 1 3457889999999987 4678
Q ss_pred eeeeccccccCcC---CccccccC
Q 017437 86 IEFTGLISWARGA---SIGWHCDD 106 (371)
Q Consensus 86 fSfTHLVcwCRsA---Sh~VHaDN 106 (371)
+..++++ ++-. .-+||.|.
T Consensus 100 ~~~s~~~--~k~Pg~~~~~wHqD~ 121 (319)
T 3gja_A 100 CWRSEFF--PKYQGDEGTDWHQAA 121 (319)
T ss_dssp EEEEEEE--EECTTCCCEEEEEEC
T ss_pred EeeeeEe--ecCCCCCCCCcccCC
Confidence 8888888 5422 25799994
No 10
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=36.26 E-value=2e+02 Score=25.69 Aligned_cols=20 Identities=20% Similarity=0.232 Sum_probs=14.7
Q ss_pred Ccccccccccc-------cceeeEEEe
Q 017437 127 RNVHSVDEVTH-------GERLTLTLW 146 (371)
Q Consensus 127 ENpHGVkAVTk-------GqRCAlALW 146 (371)
..-|||..+.+ |+|-.|+.-
T Consensus 174 ~~~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 174 LFYHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp TCCEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred ceEeccCcccCCcCCCCCCCEEEEEee
Confidence 35689988886 568887764
No 11
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.75 E-value=14 Score=27.34 Aligned_cols=26 Identities=23% Similarity=0.581 Sum_probs=16.9
Q ss_pred chhhhHhHH-H------HHhhheeee-cccCCCC
Q 017437 245 FHQPFANIL-H------ALQVVQFFH-WKASEFP 270 (371)
Q Consensus 245 ~~~~f~nil-h------alqvvqfy~-wkas~l~ 270 (371)
+.+.|.+|- | .-|||+||+ ||..+=.
T Consensus 27 yGKdf~~I~~~~v~~Kt~~~~v~fYY~wKkt~~~ 60 (63)
T 2yqk_A 27 YGKNFFRIRKELLPNKETGELITFYYYWKKTSGP 60 (63)
T ss_dssp TCSCHHHHHHHSCTTSCHHHHHHHHHHHHCSSCC
T ss_pred hCccHHHHHHHHcCCCcHHHHHHHHhcccCCCCC
Confidence 455677776 3 248898864 8876543
Done!