Query 017438
Match_columns 371
No_of_seqs 244 out of 1518
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 08:34:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017438.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017438hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02616 tetrahydrofolate dehy 100.0 3E-105 7E-110 788.7 34.6 363 5-371 2-364 (364)
2 PLN02897 tetrahydrofolate dehy 100.0 1E-100 3E-105 752.9 33.3 344 5-369 2-345 (345)
3 COG0190 FolD 5,10-methylene-te 100.0 5.7E-93 1.2E-97 681.3 31.5 282 81-370 1-282 (283)
4 PRK14171 bifunctional 5,10-met 100.0 7.4E-92 1.6E-96 679.3 32.5 282 80-368 2-283 (288)
5 PLN02516 methylenetetrahydrofo 100.0 1.9E-91 4E-96 679.6 33.5 290 80-369 9-298 (299)
6 PRK14170 bifunctional 5,10-met 100.0 1.3E-91 2.7E-96 676.6 32.0 282 80-370 2-283 (284)
7 PRK14185 bifunctional 5,10-met 100.0 1.8E-91 3.9E-96 678.0 32.8 286 81-368 2-291 (293)
8 PRK14168 bifunctional 5,10-met 100.0 2.2E-91 4.7E-96 678.9 32.8 293 78-370 1-297 (297)
9 PRK14169 bifunctional 5,10-met 100.0 5.5E-91 1.2E-95 671.9 32.1 281 80-369 1-281 (282)
10 PRK14187 bifunctional 5,10-met 100.0 7.8E-91 1.7E-95 673.8 32.8 286 80-368 2-287 (294)
11 PRK14167 bifunctional 5,10-met 100.0 8E-91 1.7E-95 675.0 32.5 287 80-370 2-292 (297)
12 PRK14166 bifunctional 5,10-met 100.0 8.1E-91 1.8E-95 670.8 32.3 280 81-368 2-281 (282)
13 PRK14182 bifunctional 5,10-met 100.0 9.4E-91 2E-95 669.9 32.0 279 81-368 2-281 (282)
14 PRK14190 bifunctional 5,10-met 100.0 9.1E-91 2E-95 671.3 31.9 283 78-369 1-283 (284)
15 PRK14172 bifunctional 5,10-met 100.0 1.3E-90 2.7E-95 668.2 30.8 277 80-365 2-278 (278)
16 PRK14177 bifunctional 5,10-met 100.0 2.4E-90 5.2E-95 667.7 31.5 279 78-368 1-279 (284)
17 PRK14184 bifunctional 5,10-met 100.0 3.5E-90 7.5E-95 667.5 31.9 280 81-369 2-285 (286)
18 PRK14180 bifunctional 5,10-met 100.0 5.1E-90 1.1E-94 665.2 31.8 280 81-368 2-281 (282)
19 PRK14186 bifunctional 5,10-met 100.0 8.4E-90 1.8E-94 667.9 32.6 286 80-369 2-287 (297)
20 PRK14183 bifunctional 5,10-met 100.0 8.9E-90 1.9E-94 662.8 31.8 279 81-367 2-280 (281)
21 PRK14181 bifunctional 5,10-met 100.0 7.6E-90 1.7E-94 665.0 31.2 280 82-367 2-285 (287)
22 PRK10792 bifunctional 5,10-met 100.0 1E-89 2.2E-94 663.9 31.7 284 78-369 1-284 (285)
23 PRK14193 bifunctional 5,10-met 100.0 1.5E-89 3.2E-94 662.6 32.0 281 79-369 2-284 (284)
24 PRK14189 bifunctional 5,10-met 100.0 2.9E-89 6.3E-94 661.1 32.4 283 78-369 1-283 (285)
25 PRK14176 bifunctional 5,10-met 100.0 2.9E-89 6.2E-94 661.0 32.2 280 79-367 7-286 (287)
26 PRK14191 bifunctional 5,10-met 100.0 9.1E-89 2E-93 657.3 31.7 280 81-368 2-281 (285)
27 PRK14179 bifunctional 5,10-met 100.0 1.9E-88 4.2E-93 655.1 32.1 282 80-369 2-283 (284)
28 PRK14173 bifunctional 5,10-met 100.0 2.7E-88 5.8E-93 654.6 31.1 280 78-368 1-282 (287)
29 PRK14174 bifunctional 5,10-met 100.0 6.2E-88 1.3E-92 655.0 32.9 288 81-368 2-293 (295)
30 PRK14175 bifunctional 5,10-met 100.0 1.1E-87 2.5E-92 650.6 31.8 284 78-370 1-284 (286)
31 PRK14194 bifunctional 5,10-met 100.0 4.6E-87 1E-91 649.7 32.5 286 78-370 2-288 (301)
32 PRK14178 bifunctional 5,10-met 100.0 1.8E-86 3.9E-91 639.7 29.9 273 82-367 2-274 (279)
33 KOG4230 C1-tetrahydrofolate sy 100.0 4E-86 8.7E-91 671.9 27.2 292 78-369 1-293 (935)
34 PRK14188 bifunctional 5,10-met 100.0 1.3E-84 2.9E-89 632.4 33.4 287 80-368 2-289 (296)
35 PRK14192 bifunctional 5,10-met 100.0 5.2E-81 1.1E-85 604.7 30.8 282 79-369 2-283 (283)
36 KOG0089 Methylenetetrahydrofol 100.0 1.5E-79 3.2E-84 580.9 27.0 293 79-371 7-309 (309)
37 PF02882 THF_DHG_CYH_C: Tetrah 100.0 3.3E-53 7.3E-58 379.8 14.1 160 201-367 1-160 (160)
38 cd01079 NAD_bind_m-THF_DH NAD 100.0 7.3E-48 1.6E-52 353.8 15.2 158 193-368 1-196 (197)
39 cd05212 NAD_bind_m-THF_DH_Cycl 100.0 2.8E-41 6.2E-46 296.8 13.4 137 213-364 3-139 (140)
40 cd01080 NAD_bind_m-THF_DH_Cycl 100.0 4.3E-41 9.3E-46 303.7 14.8 168 193-365 1-168 (168)
41 PF00763 THF_DHG_CYH: Tetrahyd 100.0 3.1E-34 6.7E-39 244.8 13.7 117 81-198 1-117 (117)
42 PRK12549 shikimate 5-dehydroge 99.9 2E-23 4.3E-28 202.5 17.4 225 115-370 8-267 (284)
43 PRK12548 shikimate 5-dehydroge 99.9 3E-23 6.4E-28 201.5 15.0 223 115-370 12-276 (289)
44 PRK12749 quinate/shikimate deh 99.9 3.6E-23 7.7E-28 201.4 14.9 221 117-370 12-273 (288)
45 PRK12550 shikimate 5-dehydroge 99.9 1.2E-22 2.6E-27 196.3 16.0 225 108-370 6-256 (272)
46 PRK00258 aroE shikimate 5-dehy 99.9 7.3E-23 1.6E-27 197.4 14.2 208 130-370 23-261 (278)
47 COG0169 AroE Shikimate 5-dehyd 99.9 8.8E-23 1.9E-27 198.3 14.7 209 129-370 23-266 (283)
48 TIGR01809 Shik-DH-AROM shikima 99.9 2.7E-22 5.8E-27 194.3 17.3 224 114-370 7-271 (282)
49 PRK14027 quinate/shikimate deh 99.9 2E-22 4.3E-27 195.8 14.3 211 129-370 21-269 (283)
50 TIGR00507 aroE shikimate 5-deh 99.9 5.9E-22 1.3E-26 190.0 13.9 209 129-370 17-254 (270)
51 PLN02520 bifunctional 3-dehydr 99.8 8.5E-20 1.8E-24 190.9 16.3 221 115-370 255-515 (529)
52 PRK09310 aroDE bifunctional 3- 99.8 8.1E-20 1.8E-24 188.9 12.9 221 115-371 218-457 (477)
53 PRK08306 dipicolinate synthase 99.6 5.9E-15 1.3E-19 144.2 11.1 131 220-365 133-286 (296)
54 TIGR02853 spore_dpaA dipicolin 99.5 1.2E-13 2.7E-18 134.5 10.2 128 220-363 132-283 (287)
55 cd01065 NAD_bind_Shikimate_DH 99.2 4.5E-10 9.7E-15 97.7 12.3 127 222-369 3-155 (155)
56 PF01488 Shikimate_DH: Shikima 99.1 2.8E-11 6.1E-16 105.2 4.3 88 228-316 2-115 (135)
57 cd05191 NAD_bind_amino_acid_DH 99.1 2.7E-10 5.9E-15 91.6 7.4 78 220-310 1-86 (86)
58 PTZ00075 Adenosylhomocysteinas 99.0 3.2E-10 6.8E-15 117.4 6.3 116 227-346 243-374 (476)
59 PF00670 AdoHcyase_NAD: S-aden 99.0 8.4E-10 1.8E-14 99.7 6.8 91 223-314 7-114 (162)
60 COG0373 HemA Glutamyl-tRNA red 99.0 8.1E-10 1.8E-14 112.7 6.9 157 137-317 100-281 (414)
61 PRK13940 glutamyl-tRNA reducta 98.8 8.4E-09 1.8E-13 105.6 9.1 157 137-317 103-280 (414)
62 cd01078 NAD_bind_H4MPT_DH NADP 98.7 8.9E-08 1.9E-12 87.3 11.3 96 221-316 7-135 (194)
63 cd05311 NAD_bind_2_malic_enz N 98.7 3.1E-08 6.8E-13 93.6 8.5 93 221-316 8-133 (226)
64 PRK14982 acyl-ACP reductase; P 98.7 1.3E-07 2.7E-12 94.8 11.2 95 223-317 140-253 (340)
65 PRK00676 hemA glutamyl-tRNA re 98.7 8.1E-08 1.8E-12 96.0 9.5 168 137-330 97-281 (338)
66 PRK05476 S-adenosyl-L-homocyst 98.6 9.6E-08 2.1E-12 98.2 7.5 94 219-313 192-302 (425)
67 TIGR00936 ahcY adenosylhomocys 98.5 5.4E-07 1.2E-11 92.2 9.0 93 220-313 176-285 (406)
68 PLN00203 glutamyl-tRNA reducta 98.5 4.1E-07 8.9E-12 95.7 8.2 96 221-317 247-376 (519)
69 TIGR00518 alaDH alanine dehydr 98.4 7.5E-07 1.6E-11 90.0 9.7 123 236-364 165-319 (370)
70 PRK00045 hemA glutamyl-tRNA re 98.4 5E-07 1.1E-11 92.6 7.8 94 223-317 167-287 (423)
71 TIGR01035 hemA glutamyl-tRNA r 98.4 4.7E-07 1E-11 92.7 6.8 95 222-317 164-284 (417)
72 COG0499 SAM1 S-adenosylhomocys 98.3 1.5E-06 3.2E-11 87.2 7.5 88 223-311 193-297 (420)
73 PF02826 2-Hacid_dh_C: D-isome 98.3 1.2E-06 2.6E-11 79.4 6.1 81 231-312 29-129 (178)
74 cd00401 AdoHcyase S-adenosyl-L 98.3 2E-06 4.3E-11 88.3 8.2 92 221-313 184-292 (413)
75 PLN02494 adenosylhomocysteinas 98.3 1.7E-06 3.8E-11 89.9 7.6 90 221-311 236-342 (477)
76 PLN02928 oxidoreductase family 98.2 2.3E-06 4.9E-11 85.8 6.9 133 234-368 155-335 (347)
77 cd05213 NAD_bind_Glutamyl_tRNA 98.2 3.9E-06 8.4E-11 82.7 8.2 93 223-316 163-279 (311)
78 COG0686 Ald Alanine dehydrogen 98.2 1.6E-06 3.4E-11 85.8 5.0 77 236-313 166-271 (371)
79 TIGR00561 pntA NAD(P) transhyd 98.1 2.2E-05 4.7E-10 82.7 11.3 90 223-313 139-287 (511)
80 PRK00257 erythronate-4-phospha 98.0 1E-05 2.2E-10 82.4 7.6 143 226-369 104-279 (381)
81 PRK15438 erythronate-4-phospha 98.0 1.2E-05 2.5E-10 81.9 7.5 143 226-369 104-279 (378)
82 PRK13243 glyoxylate reductase; 98.0 1.3E-05 2.8E-10 79.9 6.9 81 233-314 145-244 (333)
83 cd01075 NAD_bind_Leu_Phe_Val_D 98.0 1.9E-05 4.1E-10 73.3 7.3 94 219-314 3-119 (200)
84 TIGR02992 ectoine_eutC ectoine 98.0 1.8E-05 3.8E-10 78.6 7.4 75 237-312 128-226 (326)
85 PRK06932 glycerate dehydrogena 98.0 1.4E-05 3.1E-10 79.0 6.5 80 234-314 143-237 (314)
86 PRK06436 glycerate dehydrogena 97.9 1.6E-05 3.5E-10 78.4 6.7 80 234-314 118-213 (303)
87 PRK06487 glycerate dehydrogena 97.9 1.7E-05 3.8E-10 78.5 6.7 80 234-314 144-237 (317)
88 PRK08410 2-hydroxyacid dehydro 97.9 2.1E-05 4.6E-10 77.7 7.0 80 234-314 141-236 (311)
89 PRK07574 formate dehydrogenase 97.9 2.2E-05 4.7E-10 80.0 6.6 133 234-368 188-357 (385)
90 PRK15469 ghrA bifunctional gly 97.9 2.5E-05 5.3E-10 77.4 6.8 80 234-314 132-230 (312)
91 PRK08605 D-lactate dehydrogena 97.9 3.2E-05 7E-10 77.0 7.5 81 233-314 141-240 (332)
92 PRK12862 malic enzyme; Reviewe 97.9 8.8E-05 1.9E-09 81.5 11.4 172 125-314 94-295 (763)
93 KOG1370 S-adenosylhomocysteine 97.9 8.5E-05 1.9E-09 73.5 10.0 82 231-313 207-304 (434)
94 COG5322 Predicted dehydrogenas 97.9 5.6E-05 1.2E-09 73.7 8.4 93 224-316 153-267 (351)
95 PRK12480 D-lactate dehydrogena 97.8 2.6E-05 5.5E-10 77.8 6.0 80 234-314 142-238 (330)
96 PRK07232 bifunctional malic en 97.8 0.00012 2.5E-09 80.3 11.4 173 124-314 85-287 (752)
97 PRK15409 bifunctional glyoxyla 97.8 4E-05 8.7E-10 76.3 6.6 81 233-314 140-240 (323)
98 PLN02306 hydroxypyruvate reduc 97.8 4E-05 8.7E-10 78.1 6.7 80 233-313 160-275 (386)
99 PRK06718 precorrin-2 dehydroge 97.8 3.6E-05 7.9E-10 71.6 5.8 113 234-362 6-142 (202)
100 COG0111 SerA Phosphoglycerate 97.8 4.5E-05 9.6E-10 76.1 6.7 81 232-313 136-236 (324)
101 PRK08291 ectoine utilization p 97.8 8.2E-05 1.8E-09 73.9 8.4 87 223-312 119-229 (330)
102 PLN03139 formate dehydrogenase 97.7 5.3E-05 1.2E-09 77.3 6.5 133 234-368 195-364 (386)
103 PF01262 AlaDh_PNT_C: Alanine 97.7 2.3E-05 5E-10 70.4 3.0 78 235-313 17-142 (168)
104 PRK08618 ornithine cyclodeamin 97.7 0.00019 4.1E-09 71.2 9.5 74 237-312 126-223 (325)
105 PRK11790 D-3-phosphoglycerate 97.7 6.9E-05 1.5E-09 76.8 6.5 78 233-311 146-240 (409)
106 TIGR01327 PGDH D-3-phosphoglyc 97.7 8.3E-05 1.8E-09 78.5 7.0 81 233-314 133-233 (525)
107 PRK06141 ornithine cyclodeamin 97.7 0.00019 4.1E-09 70.9 9.1 77 235-312 122-221 (314)
108 PRK13581 D-3-phosphoglycerate 97.6 0.00012 2.5E-09 77.4 7.0 81 233-314 135-234 (526)
109 PRK07340 ornithine cyclodeamin 97.6 0.00035 7.5E-09 68.9 9.7 76 235-312 122-219 (304)
110 PF13241 NAD_binding_7: Putati 97.6 9.8E-05 2.1E-09 61.3 4.9 60 234-294 3-73 (103)
111 PF03446 NAD_binding_2: NAD bi 97.6 8.1E-05 1.8E-09 66.4 4.4 73 239-312 2-96 (163)
112 COG0281 SfcA Malic enzyme [Ene 97.5 0.00033 7.1E-09 71.8 8.9 172 123-313 98-302 (432)
113 PRK09424 pntA NAD(P) transhydr 97.5 0.0002 4.3E-09 75.5 7.5 90 223-313 140-288 (509)
114 PRK12861 malic enzyme; Reviewe 97.5 0.00034 7.3E-09 76.9 9.4 172 125-314 90-291 (764)
115 COG1052 LdhA Lactate dehydroge 97.5 0.00019 4.1E-09 71.7 6.3 81 233-314 141-240 (324)
116 PF08501 Shikimate_dh_N: Shiki 97.4 7.1E-05 1.5E-09 60.1 2.0 59 130-193 14-72 (83)
117 COG2084 MmsB 3-hydroxyisobutyr 97.4 0.00028 6E-09 69.4 5.8 73 239-312 1-97 (286)
118 PRK06719 precorrin-2 dehydroge 97.3 0.0003 6.5E-09 63.1 5.1 115 233-363 8-143 (157)
119 PRK14619 NAD(P)H-dependent gly 97.3 0.00044 9.5E-09 67.8 6.4 73 237-310 3-82 (308)
120 KOG0069 Glyoxylate/hydroxypyru 97.2 0.00046 1E-08 69.2 5.8 79 233-312 157-255 (336)
121 PRK11199 tyrA bifunctional cho 97.2 0.00055 1.2E-08 69.4 6.3 74 237-311 97-176 (374)
122 PLN02342 ornithine carbamoyltr 97.2 0.021 4.4E-07 57.8 17.3 188 81-289 47-267 (348)
123 TIGR02371 ala_DH_arch alanine 97.2 0.00084 1.8E-08 66.8 7.1 75 237-312 127-224 (325)
124 PF01210 NAD_Gly3P_dh_N: NAD-d 97.1 0.00076 1.6E-08 59.9 4.8 69 240-309 1-102 (157)
125 PLN02712 arogenate dehydrogena 97.0 0.0011 2.4E-08 72.0 6.7 80 232-312 363-462 (667)
126 PRK01438 murD UDP-N-acetylmura 97.0 0.0021 4.6E-08 66.4 8.5 129 229-364 7-147 (480)
127 PF02423 OCD_Mu_crystall: Orni 97.0 0.0019 4E-08 64.0 7.3 73 239-312 129-226 (313)
128 TIGR01505 tartro_sem_red 2-hyd 97.0 0.0013 2.8E-08 63.7 5.7 71 240-311 1-94 (291)
129 TIGR01470 cysG_Nterm siroheme 97.0 0.0014 3E-08 61.2 5.7 59 234-293 5-81 (205)
130 PRK13403 ketol-acid reductoiso 97.0 0.0013 2.9E-08 65.9 5.8 77 235-312 13-109 (335)
131 COG2085 Predicted dinucleotide 96.9 0.0011 2.4E-08 62.5 4.9 73 239-314 2-96 (211)
132 PLN02256 arogenate dehydrogena 96.9 0.0021 4.5E-08 63.6 7.0 76 235-311 33-128 (304)
133 PRK11559 garR tartronate semia 96.9 0.0017 3.7E-08 62.8 6.4 74 239-313 3-99 (296)
134 PF03807 F420_oxidored: NADP o 96.9 0.00051 1.1E-08 55.2 2.1 70 240-310 1-94 (96)
135 PRK15461 NADH-dependent gamma- 96.9 0.0013 2.9E-08 64.2 5.4 74 239-313 2-98 (296)
136 PRK14804 ornithine carbamoyltr 96.9 0.024 5.1E-07 56.4 14.2 148 123-288 53-225 (311)
137 PRK06823 ornithine cyclodeamin 96.9 0.0021 4.6E-08 63.8 6.6 40 273-312 184-224 (315)
138 cd05312 NAD_bind_1_malic_enz N 96.8 0.0016 3.4E-08 63.9 5.4 92 221-314 8-143 (279)
139 COG0287 TyrA Prephenate dehydr 96.8 0.0023 5E-08 62.7 6.2 74 238-312 3-100 (279)
140 COG1748 LYS9 Saccharopine dehy 96.8 0.0024 5.2E-08 65.3 6.5 111 239-363 2-140 (389)
141 PRK06046 alanine dehydrogenase 96.8 0.0031 6.8E-08 62.6 6.8 74 237-312 128-225 (326)
142 cd00762 NAD_bind_malic_enz NAD 96.7 0.0016 3.5E-08 63.1 4.5 92 221-314 8-144 (254)
143 PRK07502 cyclohexadienyl dehyd 96.7 0.0018 4E-08 63.3 4.9 73 238-311 6-101 (307)
144 PLN03129 NADP-dependent malic 96.7 0.0088 1.9E-07 64.0 10.3 98 215-314 298-439 (581)
145 PRK13814 pyrB aspartate carbam 96.7 0.21 4.6E-06 49.8 19.1 146 124-287 56-223 (310)
146 PRK07589 ornithine cyclodeamin 96.7 0.0035 7.5E-08 63.2 6.6 74 238-312 129-227 (346)
147 PRK03515 ornithine carbamoyltr 96.7 0.025 5.4E-07 56.9 12.4 146 123-288 55-232 (336)
148 PRK07417 arogenate dehydrogena 96.6 0.0017 3.7E-08 62.8 3.6 71 240-311 2-92 (279)
149 PRK06545 prephenate dehydrogen 96.6 0.0032 7E-08 63.2 5.7 73 239-312 1-97 (359)
150 PRK01713 ornithine carbamoyltr 96.6 0.031 6.7E-07 56.1 12.5 145 124-288 57-232 (334)
151 PRK06407 ornithine cyclodeamin 96.6 0.0043 9.2E-08 61.3 6.2 75 237-312 116-214 (301)
152 PRK12562 ornithine carbamoyltr 96.6 0.16 3.5E-06 51.1 17.5 148 123-289 55-233 (334)
153 PRK13529 malate dehydrogenase; 96.6 0.015 3.2E-07 62.1 10.5 164 129-310 173-417 (563)
154 PF03949 Malic_M: Malic enzyme 96.6 0.0023 5E-08 62.0 4.2 92 221-314 8-144 (255)
155 PRK00856 pyrB aspartate carbam 96.5 0.031 6.7E-07 55.5 12.1 149 124-289 56-221 (305)
156 PRK02255 putrescine carbamoylt 96.5 0.047 1E-06 55.0 13.5 145 124-287 53-228 (338)
157 TIGR01692 HIBADH 3-hydroxyisob 96.5 0.0036 7.7E-08 60.7 5.3 69 243-312 1-92 (288)
158 PRK12490 6-phosphogluconate de 96.5 0.005 1.1E-07 60.2 6.3 72 240-312 2-96 (299)
159 PRK08818 prephenate dehydrogen 96.5 0.004 8.8E-08 63.3 5.8 76 237-312 3-90 (370)
160 TIGR00670 asp_carb_tr aspartat 96.5 0.17 3.7E-06 50.2 17.0 147 124-288 50-223 (301)
161 PRK04284 ornithine carbamoyltr 96.5 0.04 8.7E-07 55.3 12.7 145 124-288 56-231 (332)
162 COG1648 CysG Siroheme synthase 96.5 0.0049 1.1E-07 58.1 5.8 115 234-363 8-146 (210)
163 PRK02102 ornithine carbamoyltr 96.5 0.044 9.6E-07 55.1 12.9 156 112-288 47-231 (331)
164 PRK14031 glutamate dehydrogena 96.5 0.014 3.1E-07 60.7 9.7 52 216-268 202-257 (444)
165 PRK11891 aspartate carbamoyltr 96.4 0.05 1.1E-06 56.5 13.3 150 124-290 137-317 (429)
166 PF07991 IlvN: Acetohydroxy ac 96.4 0.0045 9.7E-08 56.4 4.9 76 236-312 2-98 (165)
167 PRK11064 wecC UDP-N-acetyl-D-m 96.4 0.0045 9.7E-08 63.6 5.5 74 239-313 4-122 (415)
168 PRK12491 pyrroline-5-carboxyla 96.4 0.0042 9.2E-08 60.3 5.1 71 239-311 3-98 (272)
169 PRK15059 tartronate semialdehy 96.4 0.005 1.1E-07 60.3 5.5 72 240-312 2-95 (292)
170 PRK07679 pyrroline-5-carboxyla 96.3 0.0063 1.4E-07 58.8 5.7 72 237-309 2-98 (279)
171 PLN02527 aspartate carbamoyltr 96.3 0.082 1.8E-06 52.5 13.6 148 124-289 50-226 (306)
172 TIGR00658 orni_carb_tr ornithi 96.3 0.067 1.5E-06 53.0 12.9 146 124-288 50-223 (304)
173 TIGR03316 ygeW probable carbam 96.2 0.073 1.6E-06 54.1 12.9 155 124-288 53-252 (357)
174 PF00056 Ldh_1_N: lactate/mala 96.2 0.0078 1.7E-07 52.9 5.3 53 240-292 2-80 (141)
175 PRK09599 6-phosphogluconate de 96.2 0.01 2.2E-07 58.0 6.4 72 240-312 2-96 (301)
176 PLN02688 pyrroline-5-carboxyla 96.2 0.0083 1.8E-07 57.0 5.6 68 240-309 2-94 (266)
177 PRK00094 gpsA NAD(P)H-dependen 96.2 0.0079 1.7E-07 58.4 5.6 74 239-313 2-110 (325)
178 PTZ00317 NADP-dependent malic 96.2 0.033 7.2E-07 59.4 10.4 166 129-313 175-418 (559)
179 PRK08655 prephenate dehydrogen 96.1 0.009 1.9E-07 61.9 6.0 71 240-311 2-93 (437)
180 PRK14618 NAD(P)H-dependent gly 96.1 0.0084 1.8E-07 59.1 5.5 73 238-311 4-105 (328)
181 PRK08507 prephenate dehydrogen 96.1 0.011 2.4E-07 56.9 6.1 70 240-312 2-93 (275)
182 PRK05579 bifunctional phosphop 96.1 0.03 6.6E-07 57.5 9.6 94 220-313 168-305 (399)
183 TIGR00872 gnd_rel 6-phosphoglu 96.1 0.0082 1.8E-07 58.7 5.2 72 240-312 2-95 (298)
184 PRK05479 ketol-acid reductoiso 96.1 0.01 2.2E-07 59.7 5.9 71 235-306 14-104 (330)
185 PRK14106 murD UDP-N-acetylmura 96.1 0.011 2.4E-07 60.4 6.3 37 235-272 2-38 (450)
186 PRK00779 ornithine carbamoyltr 96.1 0.11 2.3E-06 51.6 13.0 147 123-288 53-224 (304)
187 cd05291 HicDH_like L-2-hydroxy 96.0 0.014 3.1E-07 57.3 6.4 53 239-292 1-79 (306)
188 PRK09260 3-hydroxybutyryl-CoA 96.0 0.012 2.6E-07 57.0 5.8 72 239-311 2-119 (288)
189 PRK02472 murD UDP-N-acetylmura 96.0 0.014 3E-07 59.6 6.5 123 235-364 2-133 (447)
190 cd05313 NAD_bind_2_Glu_DH NAD( 96.0 0.018 3.8E-07 55.9 6.8 54 216-270 12-70 (254)
191 PRK14805 ornithine carbamoyltr 96.0 0.18 3.8E-06 50.1 13.8 145 124-289 49-222 (302)
192 PF10727 Rossmann-like: Rossma 95.9 0.0086 1.9E-07 52.2 4.0 72 238-310 10-104 (127)
193 TIGR03026 NDP-sugDHase nucleot 95.9 0.018 3.8E-07 58.8 6.9 72 240-312 2-122 (411)
194 PRK05562 precorrin-2 dehydroge 95.9 0.0098 2.1E-07 56.6 4.6 60 234-294 21-98 (223)
195 PRK08192 aspartate carbamoyltr 95.9 0.15 3.1E-06 51.5 13.2 144 130-290 61-235 (338)
196 COG2423 Predicted ornithine cy 95.8 0.022 4.8E-07 57.2 7.1 74 238-312 130-227 (330)
197 PLN02712 arogenate dehydrogena 95.8 0.014 3E-07 63.7 5.8 76 235-311 49-144 (667)
198 COG3288 PntA NAD/NADP transhyd 95.8 0.03 6.5E-07 55.9 7.4 90 223-313 139-284 (356)
199 cd01076 NAD_bind_1_Glu_DH NAD( 95.8 0.021 4.5E-07 54.3 6.2 53 217-270 6-63 (227)
200 PRK11064 wecC UDP-N-acetyl-D-m 95.8 0.15 3.3E-06 52.4 12.9 75 233-308 315-414 (415)
201 TIGR00465 ilvC ketol-acid redu 95.7 0.018 3.8E-07 57.4 5.8 55 236-291 1-69 (314)
202 PRK09414 glutamate dehydrogena 95.7 0.059 1.3E-06 56.3 9.5 51 217-268 207-261 (445)
203 PRK06949 short chain dehydroge 95.7 0.015 3.3E-07 53.9 4.8 39 234-272 5-43 (258)
204 TIGR01915 npdG NADPH-dependent 95.6 0.016 3.4E-07 54.1 4.8 69 240-310 2-101 (219)
205 PLN02545 3-hydroxybutyryl-CoA 95.6 0.013 2.7E-07 57.0 4.2 72 239-311 5-121 (295)
206 PTZ00142 6-phosphogluconate de 95.6 0.019 4.2E-07 60.1 5.8 73 239-312 2-103 (470)
207 PLN02350 phosphogluconate dehy 95.6 0.018 4E-07 60.7 5.4 72 240-312 8-109 (493)
208 PF01118 Semialdhyde_dh: Semia 95.5 0.0081 1.8E-07 50.9 2.3 74 240-313 1-100 (121)
209 PRK00421 murC UDP-N-acetylmura 95.5 0.043 9.4E-07 56.7 8.1 120 236-364 5-132 (461)
210 PRK07200 aspartate/ornithine c 95.5 0.35 7.6E-06 49.9 14.5 167 112-289 60-270 (395)
211 PRK06398 aldose dehydrogenase; 95.5 0.028 6E-07 52.9 6.1 37 235-271 3-39 (258)
212 PRK07680 late competence prote 95.5 0.018 4E-07 55.3 4.9 69 240-310 2-96 (273)
213 PRK14030 glutamate dehydrogena 95.5 0.086 1.9E-06 55.0 9.9 51 217-268 203-257 (445)
214 PTZ00117 malate dehydrogenase; 95.4 0.041 8.8E-07 54.7 7.2 55 236-292 3-84 (319)
215 PRK08293 3-hydroxybutyryl-CoA 95.4 0.031 6.6E-07 54.2 6.0 72 239-311 4-121 (287)
216 PRK12367 short chain dehydroge 95.4 0.03 6.5E-07 53.1 5.7 58 234-291 10-89 (245)
217 PRK06550 fabG 3-ketoacyl-(acyl 95.4 0.034 7.3E-07 50.9 5.9 57 235-291 2-77 (235)
218 PRK09072 short chain dehydroge 95.3 0.022 4.7E-07 53.4 4.7 38 235-272 2-39 (263)
219 PLN02858 fructose-bisphosphate 95.3 0.022 4.7E-07 66.8 5.5 75 237-312 3-100 (1378)
220 PRK00066 ldh L-lactate dehydro 95.3 0.042 9E-07 54.6 6.7 55 237-292 5-84 (315)
221 PF13460 NAD_binding_10: NADH( 95.3 0.027 5.9E-07 49.7 4.9 51 241-291 1-70 (183)
222 PLN02586 probable cinnamyl alc 95.3 0.052 1.1E-06 54.1 7.4 93 219-312 165-280 (360)
223 PRK06523 short chain dehydroge 95.3 0.039 8.5E-07 51.4 6.1 38 234-271 5-42 (260)
224 PRK10637 cysG siroheme synthas 95.3 0.022 4.8E-07 59.2 4.9 113 234-361 8-144 (457)
225 PRK01710 murD UDP-N-acetylmura 95.3 0.035 7.6E-07 57.4 6.3 35 236-271 12-46 (458)
226 PF03721 UDPG_MGDP_dh_N: UDP-g 95.3 0.017 3.7E-07 53.0 3.6 53 239-292 1-87 (185)
227 PRK07530 3-hydroxybutyryl-CoA 95.2 0.023 4.9E-07 55.1 4.5 67 239-307 5-116 (292)
228 cd05211 NAD_bind_Glu_Leu_Phe_V 95.2 0.043 9.2E-07 51.9 6.2 48 224-272 9-57 (217)
229 PLN02477 glutamate dehydrogena 95.2 0.038 8.1E-07 57.1 6.2 53 218-271 182-239 (410)
230 PLN02353 probable UDP-glucose 95.2 0.23 5E-06 52.2 12.2 80 231-310 317-447 (473)
231 PRK04523 N-acetylornithine car 95.2 0.27 5.8E-06 49.5 12.2 153 123-289 48-252 (335)
232 PRK06035 3-hydroxyacyl-CoA deh 95.2 0.021 4.5E-07 55.5 4.1 32 239-271 4-35 (291)
233 PRK06199 ornithine cyclodeamin 95.1 0.035 7.6E-07 56.7 5.7 75 238-313 155-262 (379)
234 TIGR00873 gnd 6-phosphoglucona 95.1 0.019 4.2E-07 60.1 3.8 71 240-311 1-99 (467)
235 COG0078 ArgF Ornithine carbamo 95.1 0.08 1.7E-06 52.6 7.8 140 130-289 61-229 (310)
236 PRK00141 murD UDP-N-acetylmura 95.1 0.038 8.3E-07 57.5 5.9 124 235-364 12-146 (473)
237 PRK01368 murD UDP-N-acetylmura 95.0 0.064 1.4E-06 55.8 7.3 119 237-364 5-129 (454)
238 PRK06130 3-hydroxybutyryl-CoA 95.0 0.04 8.7E-07 53.8 5.4 53 239-292 5-90 (311)
239 PLN02858 fructose-bisphosphate 95.0 0.031 6.7E-07 65.6 5.4 74 238-312 324-420 (1378)
240 PRK06476 pyrroline-5-carboxyla 95.0 0.03 6.6E-07 53.3 4.5 70 240-310 2-93 (258)
241 PF02737 3HCDH_N: 3-hydroxyacy 95.0 0.039 8.4E-07 50.3 5.0 49 240-290 1-87 (180)
242 PRK08862 short chain dehydroge 95.0 0.022 4.8E-07 53.1 3.5 41 235-275 2-42 (227)
243 COG0771 MurD UDP-N-acetylmuram 94.9 0.083 1.8E-06 55.2 7.9 124 236-365 5-136 (448)
244 PRK12828 short chain dehydroge 94.9 0.031 6.7E-07 50.7 4.3 38 235-272 4-41 (239)
245 PRK05866 short chain dehydroge 94.9 0.041 9E-07 53.2 5.3 41 232-272 34-74 (293)
246 PRK03369 murD UDP-N-acetylmura 94.9 0.045 9.7E-07 57.3 5.9 111 236-364 10-142 (488)
247 PRK07523 gluconate 5-dehydroge 94.9 0.03 6.5E-07 52.1 4.1 38 235-272 7-44 (255)
248 TIGR02356 adenyl_thiF thiazole 94.9 0.022 4.7E-07 52.9 3.1 35 235-270 18-53 (202)
249 PRK07424 bifunctional sterol d 94.9 0.051 1.1E-06 56.0 6.1 40 233-272 173-212 (406)
250 PRK08229 2-dehydropantoate 2-r 94.8 0.055 1.2E-06 53.2 6.1 69 239-309 3-106 (341)
251 PRK06728 aspartate-semialdehyd 94.8 0.12 2.7E-06 52.3 8.6 112 237-356 4-138 (347)
252 PRK09880 L-idonate 5-dehydroge 94.8 0.083 1.8E-06 51.9 7.1 85 226-312 159-268 (343)
253 COG0569 TrkA K+ transport syst 94.8 0.039 8.4E-07 52.2 4.5 52 239-291 1-76 (225)
254 PRK06124 gluconate 5-dehydroge 94.7 0.028 6E-07 52.2 3.5 40 233-272 6-45 (256)
255 PLN02968 Probable N-acetyl-gam 94.7 0.035 7.6E-07 56.7 4.5 76 237-314 37-138 (381)
256 PTZ00082 L-lactate dehydrogena 94.7 0.088 1.9E-06 52.5 7.2 56 236-293 4-86 (321)
257 COG0677 WecC UDP-N-acetyl-D-ma 94.7 0.52 1.1E-05 48.7 12.7 160 128-310 229-420 (436)
258 cd00650 LDH_MDH_like NAD-depen 94.7 0.07 1.5E-06 51.2 6.1 53 241-293 1-82 (263)
259 PRK12939 short chain dehydroge 94.6 0.06 1.3E-06 49.4 5.4 37 235-271 4-40 (250)
260 cd00757 ThiF_MoeB_HesA_family 94.6 0.024 5.1E-07 53.4 2.8 77 235-312 18-145 (228)
261 PRK07231 fabG 3-ketoacyl-(acyl 94.6 0.045 9.6E-07 50.3 4.5 38 235-272 2-39 (251)
262 PRK06171 sorbitol-6-phosphate 94.6 0.08 1.7E-06 49.6 6.1 37 235-271 6-42 (266)
263 PRK07062 short chain dehydroge 94.5 0.038 8.3E-07 51.7 3.9 39 234-272 4-42 (265)
264 TIGR03366 HpnZ_proposed putati 94.5 0.071 1.5E-06 50.9 5.8 92 219-312 103-220 (280)
265 PRK06935 2-deoxy-D-gluconate 3 94.5 0.059 1.3E-06 50.3 5.1 38 234-271 11-48 (258)
266 PRK08339 short chain dehydroge 94.5 0.042 9.1E-07 52.0 4.1 38 234-271 4-41 (263)
267 PRK08085 gluconate 5-dehydroge 94.5 0.035 7.5E-07 51.6 3.5 38 235-272 6-43 (254)
268 PRK06172 short chain dehydroge 94.5 0.036 7.7E-07 51.4 3.5 38 235-272 4-41 (253)
269 TIGR01832 kduD 2-deoxy-D-gluco 94.4 0.054 1.2E-06 49.9 4.7 37 235-271 2-38 (248)
270 TIGR03325 BphB_TodD cis-2,3-di 94.4 0.048 1E-06 51.1 4.4 37 235-271 2-38 (262)
271 PLN02253 xanthoxin dehydrogena 94.4 0.068 1.5E-06 50.5 5.4 37 235-271 15-51 (280)
272 PRK06138 short chain dehydroge 94.4 0.047 1E-06 50.3 4.2 37 235-271 2-38 (252)
273 PRK06129 3-hydroxyacyl-CoA deh 94.4 0.075 1.6E-06 52.1 5.8 53 239-292 3-93 (308)
274 PRK05867 short chain dehydroge 94.4 0.047 1E-06 50.8 4.2 38 235-272 6-43 (253)
275 PRK14806 bifunctional cyclohex 94.4 0.053 1.2E-06 59.2 5.2 73 239-312 4-99 (735)
276 PRK08628 short chain dehydroge 94.4 0.057 1.2E-06 50.2 4.6 39 233-271 2-40 (258)
277 PLN02383 aspartate semialdehyd 94.3 0.13 2.9E-06 51.8 7.5 78 237-314 6-104 (344)
278 PRK05717 oxidoreductase; Valid 94.3 0.045 9.7E-07 51.0 3.9 39 233-271 5-43 (255)
279 PRK07063 short chain dehydroge 94.3 0.041 8.8E-07 51.4 3.6 37 235-271 4-40 (260)
280 PRK08265 short chain dehydroge 94.3 0.049 1.1E-06 51.2 4.1 38 235-272 3-40 (261)
281 PRK14874 aspartate-semialdehyd 94.3 0.044 9.6E-07 54.7 4.0 76 238-313 1-97 (334)
282 PRK08213 gluconate 5-dehydroge 94.3 0.048 1E-06 50.8 4.0 38 234-271 8-45 (259)
283 KOG0068 D-3-phosphoglycerate d 94.3 0.059 1.3E-06 54.5 4.7 78 232-310 140-236 (406)
284 PRK15057 UDP-glucose 6-dehydro 94.2 0.098 2.1E-06 53.5 6.5 71 240-313 2-120 (388)
285 TIGR02354 thiF_fam2 thiamine b 94.2 0.069 1.5E-06 49.7 4.9 36 234-270 17-53 (200)
286 PRK06463 fabG 3-ketoacyl-(acyl 94.2 0.077 1.7E-06 49.4 5.1 37 235-271 4-40 (255)
287 PRK06057 short chain dehydroge 94.2 0.058 1.3E-06 50.3 4.3 38 235-272 4-41 (255)
288 TIGR02355 moeB molybdopterin s 94.2 0.059 1.3E-06 51.5 4.4 34 235-269 21-55 (240)
289 PRK04690 murD UDP-N-acetylmura 94.2 0.1 2.3E-06 54.3 6.5 122 236-364 6-140 (468)
290 PRK05225 ketol-acid reductoiso 94.2 0.055 1.2E-06 56.7 4.4 79 235-314 33-136 (487)
291 PRK08220 2,3-dihydroxybenzoate 94.1 0.11 2.3E-06 48.0 5.9 38 234-271 4-41 (252)
292 TIGR01724 hmd_rel H2-forming N 94.1 0.077 1.7E-06 53.4 5.2 64 250-313 31-119 (341)
293 PRK12829 short chain dehydroge 94.1 0.074 1.6E-06 49.3 4.8 37 235-271 8-44 (264)
294 TIGR00521 coaBC_dfp phosphopan 94.1 0.14 3.1E-06 52.5 7.3 76 219-294 163-278 (390)
295 PLN02514 cinnamyl-alcohol dehy 94.1 0.12 2.7E-06 51.2 6.6 93 219-312 162-277 (357)
296 PRK07066 3-hydroxybutyryl-CoA 94.0 0.12 2.6E-06 51.7 6.5 72 239-312 8-120 (321)
297 cd01492 Aos1_SUMO Ubiquitin ac 94.0 0.15 3.3E-06 47.2 6.8 37 234-271 17-54 (197)
298 PRK08703 short chain dehydroge 94.0 0.075 1.6E-06 48.9 4.7 39 235-273 3-41 (239)
299 PRK07060 short chain dehydroge 94.0 0.064 1.4E-06 49.2 4.2 39 234-272 5-43 (245)
300 PRK07097 gluconate 5-dehydroge 94.0 0.049 1.1E-06 51.1 3.5 40 233-272 5-44 (265)
301 PRK12475 thiamine/molybdopteri 94.0 0.073 1.6E-06 53.5 4.9 37 233-270 19-56 (338)
302 PRK07890 short chain dehydroge 94.0 0.061 1.3E-06 49.8 4.1 36 236-271 3-38 (258)
303 PRK02006 murD UDP-N-acetylmura 94.0 0.12 2.7E-06 53.9 6.8 124 236-364 5-146 (498)
304 TIGR01763 MalateDH_bact malate 94.0 0.13 2.9E-06 50.8 6.6 53 239-293 2-81 (305)
305 PRK07819 3-hydroxybutyryl-CoA 94.0 0.12 2.5E-06 50.6 6.1 71 239-311 6-122 (286)
306 PRK07634 pyrroline-5-carboxyla 94.0 0.1 2.3E-06 48.8 5.6 54 237-291 3-76 (245)
307 PRK06125 short chain dehydroge 93.9 0.069 1.5E-06 49.9 4.3 37 235-271 4-40 (259)
308 PRK07531 bifunctional 3-hydrox 93.9 0.11 2.4E-06 54.6 6.3 53 239-292 5-91 (495)
309 PRK06928 pyrroline-5-carboxyla 93.9 0.095 2.1E-06 50.8 5.4 70 239-309 2-97 (277)
310 PRK05872 short chain dehydroge 93.9 0.049 1.1E-06 52.5 3.4 39 234-272 5-43 (296)
311 PRK06223 malate dehydrogenase; 93.9 0.14 3.1E-06 49.9 6.7 53 239-293 3-82 (307)
312 PRK01390 murD UDP-N-acetylmura 93.9 0.11 2.3E-06 53.6 6.0 35 236-271 7-41 (460)
313 PRK08223 hypothetical protein; 93.9 0.1 2.2E-06 51.6 5.5 35 234-269 23-58 (287)
314 PRK09242 tropinone reductase; 93.9 0.051 1.1E-06 50.6 3.3 38 234-271 5-42 (257)
315 COG0240 GpsA Glycerol-3-phosph 93.9 0.12 2.5E-06 52.0 6.0 71 239-310 2-105 (329)
316 TIGR02825 B4_12hDH leukotriene 93.9 0.12 2.6E-06 50.1 6.0 89 223-311 124-238 (325)
317 TIGR01850 argC N-acetyl-gamma- 93.9 0.092 2E-06 52.8 5.3 76 239-314 1-103 (346)
318 PRK09186 flagellin modificatio 93.9 0.063 1.4E-06 49.7 3.9 37 236-272 2-38 (256)
319 PRK08264 short chain dehydroge 93.8 0.08 1.7E-06 48.5 4.5 38 235-272 3-41 (238)
320 PRK07774 short chain dehydroge 93.8 0.079 1.7E-06 48.8 4.4 37 235-271 3-39 (250)
321 PTZ00079 NADP-specific glutama 93.8 0.13 2.8E-06 53.9 6.3 53 218-271 213-270 (454)
322 smart00859 Semialdhyde_dh Semi 93.7 0.081 1.8E-06 44.5 4.0 75 240-314 1-103 (122)
323 PRK06841 short chain dehydroge 93.7 0.095 2.1E-06 48.5 4.8 38 234-271 11-48 (255)
324 PRK05854 short chain dehydroge 93.7 0.057 1.2E-06 52.7 3.4 38 234-271 10-47 (313)
325 PLN02986 cinnamyl-alcohol dehy 93.7 0.16 3.5E-06 49.1 6.6 36 236-271 3-38 (322)
326 PRK08993 2-deoxy-D-gluconate 3 93.7 0.14 2.9E-06 47.9 5.8 36 235-270 7-42 (253)
327 cd08292 ETR_like_2 2-enoyl thi 93.7 0.24 5.2E-06 47.3 7.6 92 219-311 122-239 (324)
328 TIGR03589 PseB UDP-N-acetylglu 93.7 0.11 2.5E-06 50.9 5.5 36 236-271 2-39 (324)
329 cd08230 glucose_DH Glucose deh 93.7 0.12 2.6E-06 50.9 5.7 77 236-313 171-272 (355)
330 cd05292 LDH_2 A subgroup of L- 93.7 0.14 3.1E-06 50.5 6.2 52 240-292 2-78 (308)
331 PRK06196 oxidoreductase; Provi 93.7 0.066 1.4E-06 52.0 3.7 39 233-271 21-59 (315)
332 PRK07035 short chain dehydroge 93.6 0.06 1.3E-06 49.9 3.3 39 234-272 4-42 (252)
333 PF13738 Pyr_redox_3: Pyridine 93.6 0.11 2.3E-06 46.6 4.8 37 235-272 164-200 (203)
334 PRK08416 7-alpha-hydroxysteroi 93.6 0.084 1.8E-06 49.5 4.3 37 234-270 4-40 (260)
335 TIGR01851 argC_other N-acetyl- 93.6 0.11 2.4E-06 51.9 5.2 75 239-314 2-84 (310)
336 TIGR01963 PHB_DH 3-hydroxybuty 93.6 0.14 2.9E-06 47.2 5.5 35 238-272 1-35 (255)
337 PRK12826 3-ketoacyl-(acyl-carr 93.6 0.074 1.6E-06 48.7 3.8 36 236-271 4-39 (251)
338 PRK04308 murD UDP-N-acetylmura 93.6 0.17 3.7E-06 51.9 6.8 121 236-364 3-135 (445)
339 PRK06200 2,3-dihydroxy-2,3-dih 93.6 0.068 1.5E-06 50.0 3.5 36 236-271 4-39 (263)
340 PRK06179 short chain dehydroge 93.6 0.14 3.1E-06 48.0 5.7 35 237-271 3-37 (270)
341 PRK07478 short chain dehydroge 93.5 0.068 1.5E-06 49.6 3.5 37 235-271 3-39 (254)
342 cd08294 leukotriene_B4_DH_like 93.5 0.19 4.1E-06 48.2 6.7 93 219-311 125-242 (329)
343 PRK05690 molybdopterin biosynt 93.5 0.1 2.2E-06 50.0 4.7 35 234-269 28-63 (245)
344 PRK08277 D-mannonate oxidoredu 93.5 0.064 1.4E-06 50.6 3.3 38 234-271 6-43 (278)
345 PRK09291 short chain dehydroge 93.5 0.11 2.4E-06 48.0 4.9 34 238-271 2-35 (257)
346 cd05293 LDH_1 A subgroup of L- 93.5 0.2 4.2E-06 49.9 6.8 52 239-292 4-82 (312)
347 PRK13394 3-hydroxybutyrate deh 93.5 0.079 1.7E-06 49.0 3.8 37 235-271 4-40 (262)
348 PRK07825 short chain dehydroge 93.5 0.086 1.9E-06 49.6 4.1 37 235-271 2-38 (273)
349 PRK06194 hypothetical protein; 93.5 0.078 1.7E-06 50.2 3.8 37 235-271 3-39 (287)
350 PLN02178 cinnamyl-alcohol dehy 93.4 0.23 4.9E-06 50.1 7.3 93 219-312 159-275 (375)
351 PRK15182 Vi polysaccharide bio 93.4 0.17 3.6E-06 52.4 6.5 74 239-314 7-124 (425)
352 PRK12429 3-hydroxybutyrate deh 93.4 0.1 2.2E-06 48.1 4.5 37 236-272 2-38 (258)
353 PRK07856 short chain dehydroge 93.4 0.12 2.6E-06 48.0 4.9 37 235-271 3-39 (252)
354 PRK05786 fabG 3-ketoacyl-(acyl 93.4 0.094 2E-06 47.9 4.1 38 235-272 2-39 (238)
355 PRK08589 short chain dehydroge 93.4 0.081 1.8E-06 50.1 3.8 37 235-271 3-39 (272)
356 PRK08936 glucose-1-dehydrogena 93.4 0.11 2.5E-06 48.4 4.7 37 235-271 4-40 (261)
357 TIGR03376 glycerol3P_DH glycer 93.3 0.13 2.8E-06 51.9 5.3 69 240-309 1-115 (342)
358 PRK07576 short chain dehydroge 93.3 0.094 2E-06 49.5 4.1 37 235-271 6-42 (264)
359 PRK06500 short chain dehydroge 93.3 0.078 1.7E-06 48.7 3.4 37 235-271 3-39 (249)
360 PRK12481 2-deoxy-D-gluconate 3 93.3 0.11 2.4E-06 48.6 4.5 37 235-271 5-41 (251)
361 cd05188 MDR Medium chain reduc 93.3 0.36 7.7E-06 44.2 7.8 94 219-313 116-235 (271)
362 PLN02662 cinnamyl-alcohol dehy 93.3 0.2 4.2E-06 48.2 6.3 35 237-271 3-37 (322)
363 PRK05653 fabG 3-ketoacyl-(acyl 93.3 0.12 2.7E-06 46.8 4.7 38 235-272 2-39 (246)
364 PLN02427 UDP-apiose/xylose syn 93.3 0.18 3.8E-06 50.5 6.2 59 232-290 8-95 (386)
365 PRK07814 short chain dehydroge 93.2 0.11 2.3E-06 48.9 4.3 37 235-271 7-43 (263)
366 PRK07067 sorbitol dehydrogenas 93.2 0.082 1.8E-06 49.2 3.5 36 236-271 4-39 (257)
367 cd08295 double_bond_reductase_ 93.2 0.22 4.8E-06 48.5 6.7 93 219-311 133-252 (338)
368 PRK05808 3-hydroxybutyryl-CoA 93.2 0.095 2.1E-06 50.5 4.1 31 239-270 4-34 (282)
369 CHL00194 ycf39 Ycf39; Provisio 93.2 0.15 3.2E-06 49.7 5.4 51 240-290 2-73 (317)
370 cd00704 MDH Malate dehydrogena 93.2 0.2 4.4E-06 50.0 6.4 54 240-293 2-88 (323)
371 PRK07666 fabG 3-ketoacyl-(acyl 93.2 0.11 2.3E-06 47.8 4.2 38 235-272 4-41 (239)
372 COG0039 Mdh Malate/lactate deh 93.2 0.21 4.6E-06 49.9 6.5 52 239-292 1-80 (313)
373 PRK05565 fabG 3-ketoacyl-(acyl 93.2 0.099 2.1E-06 47.8 3.9 38 235-272 2-40 (247)
374 PRK05876 short chain dehydroge 93.2 0.1 2.2E-06 49.9 4.1 37 235-271 3-39 (275)
375 TIGR01202 bchC 2-desacetyl-2-h 93.2 0.21 4.6E-06 48.4 6.4 76 236-312 143-233 (308)
376 PRK08040 putative semialdehyde 93.1 0.09 2E-06 52.9 3.8 78 237-314 3-101 (336)
377 PRK12743 oxidoreductase; Provi 93.1 0.2 4.3E-06 46.7 5.9 34 237-270 1-34 (256)
378 KOG1198 Zinc-binding oxidoredu 93.1 0.45 9.7E-06 48.1 8.8 77 218-294 132-238 (347)
379 KOG0409 Predicted dehydrogenas 93.0 0.19 4.2E-06 50.1 5.9 57 236-293 33-103 (327)
380 PRK10727 DNA-binding transcrip 93.0 4.4 9.5E-05 39.4 15.3 88 81-175 20-122 (343)
381 PRK12921 2-dehydropantoate 2-r 93.0 0.22 4.7E-06 48.0 6.1 69 240-309 2-101 (305)
382 PRK06079 enoyl-(acyl carrier p 93.0 0.12 2.6E-06 48.5 4.2 36 236-271 5-42 (252)
383 COG2910 Putative NADH-flavin r 92.9 0.21 4.6E-06 46.8 5.6 54 239-292 1-73 (211)
384 PRK08762 molybdopterin biosynt 92.9 0.13 2.7E-06 52.2 4.6 35 235-270 132-167 (376)
385 PRK06139 short chain dehydroge 92.9 0.078 1.7E-06 52.6 3.0 38 235-272 4-41 (330)
386 PF05368 NmrA: NmrA-like famil 92.9 0.15 3.3E-06 47.1 4.8 51 241-291 1-74 (233)
387 PRK15181 Vi polysaccharide bio 92.9 0.26 5.6E-06 48.7 6.7 38 233-270 10-47 (348)
388 PRK06077 fabG 3-ketoacyl-(acyl 92.9 0.2 4.4E-06 46.0 5.6 36 235-270 3-38 (252)
389 PRK08644 thiamine biosynthesis 92.9 0.15 3.3E-06 47.8 4.8 36 234-270 24-60 (212)
390 KOG0725 Reductases with broad 92.9 0.13 2.8E-06 50.0 4.5 40 234-273 4-43 (270)
391 PRK08217 fabG 3-ketoacyl-(acyl 92.9 0.095 2.1E-06 48.1 3.3 37 235-271 2-38 (253)
392 PLN02819 lysine-ketoglutarate 92.8 0.13 2.9E-06 58.7 5.1 39 275-313 291-341 (1042)
393 PRK06114 short chain dehydroge 92.8 0.16 3.5E-06 47.3 4.9 39 234-272 4-42 (254)
394 PRK07326 short chain dehydroge 92.8 0.1 2.2E-06 47.7 3.4 36 236-271 4-39 (237)
395 cd08293 PTGR2 Prostaglandin re 92.8 0.24 5.1E-06 48.1 6.2 74 238-311 155-255 (345)
396 TIGR01214 rmlD dTDP-4-dehydror 92.8 0.14 3E-06 48.4 4.4 52 240-291 1-60 (287)
397 PF00899 ThiF: ThiF family; I 92.8 0.086 1.9E-06 45.3 2.7 33 237-270 1-34 (135)
398 PLN02602 lactate dehydrogenase 92.8 0.29 6.2E-06 49.6 6.9 52 239-292 38-116 (350)
399 TIGR03206 benzo_BadH 2-hydroxy 92.7 0.13 2.8E-06 47.3 4.0 36 236-271 1-36 (250)
400 PLN02896 cinnamyl-alcohol dehy 92.7 0.19 4.2E-06 49.5 5.5 59 233-291 5-89 (353)
401 PLN00198 anthocyanidin reducta 92.7 0.29 6.3E-06 47.8 6.6 36 235-270 6-41 (338)
402 PRK12742 oxidoreductase; Provi 92.7 0.16 3.4E-06 46.4 4.5 36 235-270 3-38 (237)
403 cd00300 LDH_like L-lactate deh 92.6 0.23 4.9E-06 48.9 5.8 51 241-293 1-78 (300)
404 PRK05875 short chain dehydroge 92.6 0.14 3.1E-06 48.1 4.3 37 235-271 4-40 (276)
405 PLN02695 GDP-D-mannose-3',5'-e 92.6 0.19 4.2E-06 50.4 5.4 54 237-290 20-94 (370)
406 KOG1494 NAD-dependent malate d 92.6 0.13 2.8E-06 51.0 3.9 58 235-293 25-108 (345)
407 PRK05557 fabG 3-ketoacyl-(acyl 92.6 0.18 4E-06 45.8 4.8 37 235-271 2-38 (248)
408 PRK06198 short chain dehydroge 92.5 0.14 2.9E-06 47.6 3.9 38 235-272 3-41 (260)
409 PF03435 Saccharop_dh: Sacchar 92.5 0.14 3.1E-06 51.4 4.3 112 241-365 1-141 (386)
410 PRK00683 murD UDP-N-acetylmura 92.5 0.28 6.1E-06 50.1 6.5 104 237-364 2-127 (418)
411 TIGR02279 PaaC-3OHAcCoADH 3-hy 92.5 0.15 3.3E-06 53.8 4.7 32 239-271 6-37 (503)
412 PRK07533 enoyl-(acyl carrier p 92.5 0.19 4E-06 47.4 4.8 37 234-271 6-45 (258)
413 PRK05600 thiamine biosynthesis 92.5 0.17 3.8E-06 51.4 4.9 35 234-269 37-72 (370)
414 cd08239 THR_DH_like L-threonin 92.5 0.42 9.2E-06 46.4 7.4 93 218-312 145-264 (339)
415 PLN02657 3,8-divinyl protochlo 92.4 0.22 4.8E-06 50.5 5.6 39 233-271 55-93 (390)
416 PRK08268 3-hydroxy-acyl-CoA de 92.4 0.16 3.6E-06 53.6 4.8 71 239-311 8-124 (507)
417 PRK05086 malate dehydrogenase; 92.4 0.4 8.6E-06 47.6 7.3 55 239-293 1-81 (312)
418 PRK06505 enoyl-(acyl carrier p 92.4 0.17 3.7E-06 48.3 4.5 36 236-271 5-42 (271)
419 TIGR03026 NDP-sugDHase nucleot 92.4 0.33 7.2E-06 49.5 6.9 85 225-309 300-409 (411)
420 PRK12823 benD 1,6-dihydroxycyc 92.4 0.19 4.1E-06 46.7 4.7 37 235-271 5-41 (260)
421 PLN02778 3,5-epimerase/4-reduc 92.4 0.35 7.5E-06 47.1 6.7 54 238-291 9-67 (298)
422 COG0059 IlvC Ketol-acid reduct 92.3 0.24 5.3E-06 49.5 5.5 78 236-314 16-114 (338)
423 PRK06197 short chain dehydroge 92.3 0.1 2.3E-06 50.2 3.0 37 235-271 13-49 (306)
424 PRK11880 pyrroline-5-carboxyla 92.3 0.25 5.4E-06 47.0 5.5 52 239-291 3-72 (267)
425 PRK11863 N-acetyl-gamma-glutam 92.3 0.15 3.4E-06 50.8 4.2 76 239-314 3-85 (313)
426 PRK08594 enoyl-(acyl carrier p 92.3 0.23 5E-06 46.9 5.2 37 234-270 3-41 (257)
427 PRK12827 short chain dehydroge 92.3 0.19 4.2E-06 45.9 4.6 36 235-270 3-38 (249)
428 PLN03209 translocon at the inn 92.3 0.2 4.4E-06 53.9 5.3 36 236-271 78-113 (576)
429 COG0334 GdhA Glutamate dehydro 92.3 0.44 9.5E-06 49.3 7.5 53 217-270 182-238 (411)
430 PLN02214 cinnamoyl-CoA reducta 92.2 0.32 6.9E-06 48.1 6.3 35 236-270 8-42 (342)
431 PRK11303 DNA-binding transcrip 92.2 2.9 6.3E-05 40.1 12.8 93 81-176 19-125 (328)
432 PRK05597 molybdopterin biosynt 92.2 0.2 4.4E-06 50.6 5.0 35 234-269 24-59 (355)
433 PRK12936 3-ketoacyl-(acyl-carr 92.2 0.18 4E-06 46.0 4.3 37 235-271 3-39 (245)
434 PRK06914 short chain dehydroge 92.2 0.19 4.2E-06 47.3 4.6 36 237-272 2-37 (280)
435 PRK08643 acetoin reductase; Va 92.2 0.19 4.1E-06 46.7 4.4 34 238-271 2-35 (256)
436 cd08253 zeta_crystallin Zeta-c 92.2 0.64 1.4E-05 43.5 8.1 94 219-312 126-245 (325)
437 PRK06181 short chain dehydroge 92.1 0.23 5E-06 46.3 5.0 34 238-271 1-34 (263)
438 PLN00141 Tic62-NAD(P)-related 92.1 0.2 4.3E-06 47.0 4.5 38 234-271 13-50 (251)
439 PF04127 DFP: DNA / pantothena 92.1 0.22 4.8E-06 46.0 4.7 78 236-313 1-121 (185)
440 PRK06444 prephenate dehydrogen 92.1 0.25 5.3E-06 46.2 5.0 58 240-311 2-60 (197)
441 PRK08278 short chain dehydroge 92.1 0.21 4.6E-06 47.4 4.7 37 235-271 3-39 (273)
442 COG2072 TrkA Predicted flavopr 92.1 0.19 4.1E-06 52.2 4.7 37 234-271 171-207 (443)
443 PRK12937 short chain dehydroge 92.0 0.23 5E-06 45.4 4.8 37 235-271 2-38 (245)
444 PRK08226 short chain dehydroge 92.0 0.22 4.7E-06 46.4 4.6 37 235-271 3-39 (263)
445 PRK06113 7-alpha-hydroxysteroi 92.0 0.2 4.3E-06 46.7 4.3 37 235-271 8-44 (255)
446 PRK07792 fabG 3-ketoacyl-(acyl 92.0 0.22 4.7E-06 48.4 4.7 39 233-271 7-45 (306)
447 cd01339 LDH-like_MDH L-lactate 92.0 0.3 6.6E-06 47.7 5.7 51 241-293 1-78 (300)
448 PRK05993 short chain dehydroge 91.9 0.19 4.1E-06 47.7 4.2 35 237-271 3-37 (277)
449 TIGR01745 asd_gamma aspartate- 91.9 0.38 8.3E-06 49.1 6.5 111 239-356 1-140 (366)
450 cd05290 LDH_3 A subgroup of L- 91.9 0.27 5.8E-06 48.8 5.3 53 240-293 1-80 (307)
451 cd08281 liver_ADH_like1 Zinc-d 91.9 0.38 8.3E-06 47.8 6.5 75 237-312 191-292 (371)
452 PRK08263 short chain dehydroge 91.9 0.29 6.2E-06 46.3 5.3 35 237-271 2-36 (275)
453 PRK07677 short chain dehydroge 91.8 0.2 4.4E-06 46.5 4.2 34 238-271 1-34 (252)
454 PRK07201 short chain dehydroge 91.8 0.23 5E-06 52.9 5.1 38 235-272 368-405 (657)
455 PLN00106 malate dehydrogenase 91.8 0.54 1.2E-05 47.1 7.4 56 237-293 17-98 (323)
456 PRK07806 short chain dehydroge 91.8 0.26 5.7E-06 45.4 4.9 36 236-271 4-39 (248)
457 PRK07109 short chain dehydroge 91.8 0.14 3.1E-06 50.6 3.2 37 235-271 5-41 (334)
458 KOG1201 Hydroxysteroid 17-beta 91.8 0.35 7.5E-06 48.1 5.8 59 233-291 33-124 (300)
459 cd05282 ETR_like 2-enoyl thioe 91.7 0.57 1.2E-05 44.6 7.3 94 219-312 120-239 (323)
460 TIGR03451 mycoS_dep_FDH mycoth 91.7 0.37 8E-06 47.6 6.2 76 236-312 175-278 (358)
461 PRK12809 putative oxidoreducta 91.7 0.37 8E-06 52.2 6.6 34 237-271 309-342 (639)
462 PRK06182 short chain dehydroge 91.7 0.21 4.5E-06 47.1 4.2 35 237-271 2-36 (273)
463 COG0604 Qor NADPH:quinone redu 91.7 0.38 8.3E-06 47.9 6.2 93 219-312 124-243 (326)
464 PRK09135 pteridine reductase; 91.7 0.23 5E-06 45.4 4.3 36 236-271 4-39 (249)
465 PLN02730 enoyl-[acyl-carrier-p 91.7 0.28 6E-06 48.5 5.2 35 233-268 4-41 (303)
466 PRK07577 short chain dehydroge 91.7 0.29 6.3E-06 44.6 5.0 35 237-271 2-36 (234)
467 PRK12769 putative oxidoreducta 91.6 0.37 8.1E-06 52.2 6.5 34 237-271 326-359 (654)
468 PF00070 Pyr_redox: Pyridine n 91.6 0.29 6.3E-06 38.2 4.2 32 240-272 1-32 (80)
469 PRK08945 putative oxoacyl-(acy 91.6 0.15 3.3E-06 47.1 3.1 37 235-271 9-45 (247)
470 cd05294 LDH-like_MDH_nadp A la 91.6 0.45 9.9E-06 47.0 6.6 54 239-293 1-84 (309)
471 TIGR03466 HpnA hopanoid-associ 91.5 0.3 6.5E-06 46.6 5.1 52 239-290 1-73 (328)
472 PRK06701 short chain dehydroge 91.5 0.29 6.3E-06 47.2 5.0 38 234-271 42-79 (290)
473 PRK07984 enoyl-(acyl carrier p 91.5 0.22 4.8E-06 47.4 4.1 36 236-271 4-41 (262)
474 PTZ00345 glycerol-3-phosphate 91.5 0.35 7.6E-06 49.2 5.8 72 238-310 11-129 (365)
475 PRK08642 fabG 3-ketoacyl-(acyl 91.5 0.27 6E-06 45.2 4.6 36 235-270 2-37 (253)
476 PRK08267 short chain dehydroge 91.4 0.21 4.6E-06 46.5 3.8 33 239-271 2-34 (260)
477 PRK10423 transcriptional repre 91.3 3.9 8.5E-05 39.1 12.6 88 81-175 17-119 (327)
478 PRK12744 short chain dehydroge 91.3 0.25 5.3E-06 46.1 4.2 35 235-269 5-39 (257)
479 PRK07831 short chain dehydroge 91.3 0.28 6.1E-06 45.8 4.5 38 235-272 14-52 (262)
480 TIGR01777 yfcH conserved hypot 91.3 0.42 9.1E-06 44.9 5.7 52 241-292 1-68 (292)
481 PRK13376 pyrB bifunctional asp 91.2 2.6 5.6E-05 45.1 12.1 152 124-284 61-244 (525)
482 PRK07985 oxidoreductase; Provi 91.2 0.28 6.1E-06 47.4 4.6 36 235-270 46-81 (294)
483 PRK06720 hypothetical protein; 91.2 0.24 5.2E-06 44.7 3.9 42 234-275 12-53 (169)
484 PRK08303 short chain dehydroge 91.2 0.31 6.7E-06 47.7 4.9 38 234-271 4-41 (305)
485 PRK06522 2-dehydropantoate 2-r 91.1 0.48 1E-05 45.5 6.1 68 240-309 2-99 (304)
486 cd01487 E1_ThiF_like E1_ThiF_l 91.1 0.41 8.9E-06 43.5 5.3 30 240-270 1-31 (174)
487 cd01338 MDH_choloroplast_like 91.1 0.51 1.1E-05 47.2 6.4 55 239-293 3-90 (322)
488 COG1004 Ugd Predicted UDP-gluc 91.1 0.72 1.6E-05 47.7 7.5 86 222-308 295-406 (414)
489 PF00185 OTCace: Aspartate/orn 91.1 0.41 8.9E-06 42.9 5.2 74 237-310 1-120 (158)
490 TIGR02622 CDP_4_6_dhtase CDP-g 91.1 0.35 7.6E-06 47.6 5.2 36 236-271 2-37 (349)
491 PRK12779 putative bifunctional 91.0 0.34 7.4E-06 55.1 5.7 35 236-271 304-338 (944)
492 PLN02653 GDP-mannose 4,6-dehyd 91.0 0.36 7.7E-06 47.2 5.2 36 235-270 3-38 (340)
493 PRK12746 short chain dehydroge 91.0 0.25 5.4E-06 45.7 3.9 34 235-268 3-36 (254)
494 PRK06180 short chain dehydroge 90.9 0.27 5.9E-06 46.6 4.1 35 237-271 3-37 (277)
495 PRK07791 short chain dehydroge 90.9 0.25 5.5E-06 47.4 4.0 36 236-271 4-39 (286)
496 PTZ00325 malate dehydrogenase; 90.9 0.72 1.6E-05 46.2 7.3 57 236-293 6-88 (321)
497 PLN02819 lysine-ketoglutarate 90.9 0.16 3.5E-06 58.1 3.0 116 236-364 567-721 (1042)
498 PRK03806 murD UDP-N-acetylmura 90.9 0.6 1.3E-05 47.8 6.8 35 236-271 4-38 (438)
499 PLN02780 ketoreductase/ oxidor 90.8 0.18 3.8E-06 49.8 2.8 39 237-275 52-90 (320)
500 PRK08177 short chain dehydroge 90.8 0.41 9E-06 43.7 5.1 34 239-272 2-35 (225)
No 1
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=3.4e-105 Score=788.74 Aligned_cols=363 Identities=81% Similarity=1.197 Sum_probs=336.9
Q ss_pred ccceeccccccccccccccccccccCCCccccccccccccCCCCCCccccccceeecCCCCCcccccccccccccceeee
Q 017438 5 RSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSPSLPVMNATMASEASAKVID 84 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~a~ild 84 (371)
+|++|+|||||+++||+||+|..+ ||+|++..|+.. +...++.+...+.|.+.+++. .....+.+++++|++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ild 77 (364)
T PLN02616 2 ASLMFTDCSSSTTSRLIHFNRIST-PFNGTFLLRRCV--GPLRVRTTASGRGCCINSSSS-PSPVINADTGSEGGAKVID 77 (364)
T ss_pred chhhhccccccchhhhhHHhhccc-ccccccccceec--cccccCccccccccccCCCCC-cchhhhhhcCccccCeEeE
Confidence 689999999999999999999866 899999998733 233344444457888877776 4555667888998889999
Q ss_pred cHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhc
Q 017438 85 GKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFN 164 (371)
Q Consensus 85 Gk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN 164 (371)
||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|++||
T Consensus 78 Gk~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN 157 (364)
T PLN02616 78 GKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFN 157 (364)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHc
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEE
Q 017438 165 DDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVI 244 (371)
Q Consensus 165 ~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVI 244 (371)
+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|++.++|+||||.||+++|++|+++++||+|+||
T Consensus 158 ~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVI 237 (364)
T PLN02616 158 NDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVI 237 (364)
T ss_pred CCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999976546789999999999999999999999999999
Q ss_pred cCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCce
Q 017438 245 GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYR 324 (371)
Q Consensus 245 G~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~k 324 (371)
|||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+++++++++|+|
T Consensus 238 GRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~~~~~~~~~g~k 317 (364)
T PLN02616 238 GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVEDASSPRGYR 317 (364)
T ss_pred CCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccccccccccCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999976544455668
Q ss_pred eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 325 LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 325 l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
++|||||+++.++|++||||||||||||++|||+|++++++++.+++
T Consensus 318 lvGDVdfe~v~~~as~ITPVPGGVGpmTva~Ll~N~~~aa~~~~~~~ 364 (364)
T PLN02616 318 LVGDVCYEEACKVASAVTPVPGGVGPMTIAMLLSNTLTSAKRIHNFQ 364 (364)
T ss_pred EEecCcHHHHHhhccccCCCCCchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999998874
No 2
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=1.4e-100 Score=752.86 Aligned_cols=344 Identities=59% Similarity=0.952 Sum_probs=309.7
Q ss_pred ccceeccccccccccccccccccccCCCccccccccccccCCCCCCccccccceeecCCCCCcccccccccccccceeee
Q 017438 5 RSMIFADCSSSTTARLVPFGRSRLLCGGGALCARRRLHVGVGPSLPASLRTTLTVHSSPSPSLPVMNATMASEASAKVID 84 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~a~ild 84 (371)
+|++|+|||||+|+||++|+|....| |+ ...-.+..|+ +.+ . ....++.++|+.+++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~-~~~-----~---~~~~~~~~~~~~~~ild 60 (345)
T PLN02897 2 LASAHTKAFRLATRDVHCFSSILVSP---------PL---VSLDLPENWI-PYS-----D---PPPPVSFETEQKTVVID 60 (345)
T ss_pred chhhhhhccccchhhhhhhhhhhcCC---------cc---cccccccCCC-ccc-----c---ccccccccccccceEee
Confidence 67999999999999999998775544 11 0111112221 111 0 11112355666789999
Q ss_pred cHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhc
Q 017438 85 GKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFN 164 (371)
Q Consensus 85 Gk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN 164 (371)
||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|++||
T Consensus 61 Gk~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN 140 (345)
T PLN02897 61 GNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFN 140 (345)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEE
Q 017438 165 DDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVI 244 (371)
Q Consensus 165 ~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVI 244 (371)
+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+++++|+||||.||+++|++|+++++||+|+||
T Consensus 141 ~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVI 220 (345)
T PLN02897 141 EDTSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVI 220 (345)
T ss_pred CCCCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999876545789999999999999999999999999999
Q ss_pred cCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCce
Q 017438 245 GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYR 324 (371)
Q Consensus 245 G~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~k 324 (371)
|||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+.+++++..|+|
T Consensus 221 GRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~~~~~~~~~g~k 300 (345)
T PLN02897 221 GRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCEFGYR 300 (345)
T ss_pred CCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccccccccCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999976544445668
Q ss_pred eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 325 LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 325 l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
++|||||+++.++|++||||||||||||++|||+|+++++++|++
T Consensus 301 lvGDVdfe~v~~~as~iTPVPGGVGpmTvamLm~N~~~a~~~~~~ 345 (345)
T PLN02897 301 LVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLDAAKRIFL 345 (345)
T ss_pred eEecccHHHHHhhccccCCCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999874
No 3
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=100.00 E-value=5.7e-93 Score=681.31 Aligned_cols=282 Identities=57% Similarity=0.921 Sum_probs=274.8
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|+++++++++++++++++.++.|+|++|+|||||+|+.|+++|.|+|+++||.++.++||++++|+||++.|
T Consensus 1 ~~idGk~lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I 80 (283)
T COG0190 1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALI 80 (283)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHH
Confidence 37999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+||||||||+|.|+|..+ ++.|+||||.|++++|++|+++++||+
T Consensus 81 ~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~ 158 (283)
T COG0190 81 DELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKN 158 (283)
T ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 788999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||||++++|+++|||||+||++|+|+.+++++|||||+|+|+|+++++||||||++|||+|+|++++
T Consensus 159 ~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~vk~gavVIDVGinrv~~---- 234 (283)
T COG0190 159 VVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVND---- 234 (283)
T ss_pred EEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccccCCCEEEecCCccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+|++|||||++++++|+|||||||||||||++|||+|++++++++.+.
T Consensus 235 --~kl~GDVdf~~v~~~a~~iTPVPGGVGPmTvamLl~Nt~~a~~~~~~~ 282 (283)
T COG0190 235 --GKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRGE 282 (283)
T ss_pred --CceEeeccHHHHHHhhcccCCCCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 289999999999999999999999999999999999999999987764
No 4
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7.4e-92 Score=679.30 Aligned_cols=282 Identities=43% Similarity=0.757 Sum_probs=273.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 2 ~~il~Gk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~ 81 (288)
T PRK14171 2 NNIIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISK 81 (288)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 58999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.|. .++|+||||.||+++|++|+++++||
T Consensus 82 I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~GK 160 (288)
T PRK14171 82 INELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTGK 160 (288)
T ss_pred HHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999763 37899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|++++|+++|||||+||++|+||++++++|||||+|+|+|++|++||||||++|||+|+|+.++
T Consensus 161 ~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~~~~--- 237 (288)
T PRK14171 161 NVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRISG--- 237 (288)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999743
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||+++.++|+|||||||||||||++|||+|+++++++.+
T Consensus 238 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 283 (288)
T PRK14171 238 --N-KIIGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFKDSL 283 (288)
T ss_pred --C-CeECCccHHHHHhhceEeCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 2 899999999999999999999999999999999999999998654
No 5
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=100.00 E-value=1.9e-91 Score=679.56 Aligned_cols=290 Identities=64% Similarity=1.080 Sum_probs=278.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 9 ~~ildGk~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~ 88 (299)
T PLN02516 9 AQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISK 88 (299)
T ss_pred CeEeehHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.++..++|+||||.||+++|++|+++++||
T Consensus 89 I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk 168 (299)
T PLN02516 89 VHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGK 168 (299)
T ss_pred HHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999765467899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+.+++..
T Consensus 169 ~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~~~~~~~ 248 (299)
T PLN02516 169 KAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVSDPSK 248 (299)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754333
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
..|++++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus 249 ~~g~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~~ 298 (299)
T PLN02516 249 KSGYRLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRVFA 298 (299)
T ss_pred cCCCceEcCcChHHhhhhceEecCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 33558999999999999999999999999999999999999999999974
No 6
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-91 Score=676.56 Aligned_cols=282 Identities=51% Similarity=0.895 Sum_probs=274.3
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~iA~~i~~~ik~~i~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 80 (284)
T PRK14170 2 GEIIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSV 80 (284)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 589999999999999999999999887 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||
T Consensus 81 I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 158 (284)
T PRK14170 81 VEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEGK 158 (284)
T ss_pred HHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 56899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||++++|+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+.++
T Consensus 159 ~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~~~~--- 235 (284)
T PRK14170 159 RAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDEN--- 235 (284)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++++.+
T Consensus 236 --g-kl~GDvdfe~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 283 (284)
T PRK14170 236 --N-KLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKM 283 (284)
T ss_pred --C-CeecccchHHHHhhccEecCCCCChHHHHHHHHHHHHHHHHHHHhhc
Confidence 2 89999999999999999999999999999999999999999998875
No 7
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.8e-91 Score=678.00 Aligned_cols=286 Identities=48% Similarity=0.807 Sum_probs=274.5
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (293)
T PRK14185 2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKV 81 (293)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~ 159 (293)
T PRK14185 82 RELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKK 159 (293)
T ss_pred HHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|++++
T Consensus 160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~~ 239 (293)
T PRK14185 160 CVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVPD 239 (293)
T ss_pred EEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCccccc
Confidence 999999999999999999998 7999999999999999999999999999999999999999999999999999755
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+++..|+|++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 240 ~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 291 (293)
T PRK14185 240 ATRKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKAI 291 (293)
T ss_pred ccccCCCeeEcCCCHHHHHhhccEeCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 3333455899999999999999999999999999999999999999997643
No 8
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.2e-91 Score=678.94 Aligned_cols=293 Identities=50% Similarity=0.822 Sum_probs=277.2
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|++|++++++++++|++++|++|+|++|+||+||+|..|+++|+|+|+++||+++.++||++++|+|++
T Consensus 1 m~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~ 80 (297)
T PRK14168 1 MSAKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELL 80 (297)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999988789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~ 160 (297)
T PRK14168 81 ALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETS 160 (297)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999998754478999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~ 313 (371)
||+|+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|+
T Consensus 161 Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~ 240 (297)
T PRK14168 161 GAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNR 240 (297)
T ss_pred CCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCc
Confidence 999999999999999999999998 8999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 314 VEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 314 ~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+.+..+..+++++|||||+++.++|++||||||||||||++|||+|+++++++|++.
T Consensus 241 ~~~~~~~g~~~~~GDVdfe~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~~ 297 (297)
T PRK14168 241 VGTNESTGKAILSGDVDFDAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLSL 297 (297)
T ss_pred cCccccCCCcceeccccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 632111112249999999999999999999999999999999999999999999873
No 9
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.5e-91 Score=671.93 Aligned_cols=281 Identities=48% Similarity=0.814 Sum_probs=272.3
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
|++||||++|+++++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 1 ~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 79 (282)
T PRK14169 1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAK 79 (282)
T ss_pred CeeeehHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 468999999999999999999999877 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.+ .++|+||||+||+++|++|+++++||
T Consensus 80 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 157 (282)
T PRK14169 80 VAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGK 157 (282)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 67899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|++.+
T Consensus 158 ~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~~~~--- 234 (282)
T PRK14169 158 RVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGAD--- 234 (282)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++..+
T Consensus 235 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 281 (282)
T PRK14169 235 --G-KLLGDVDEAAVAPIASAITPVPGGVGPMTIASLMAQTVTLAKRRAN 281 (282)
T ss_pred --C-CeeecCcHHHHHhhccEecCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 2 8999999999999999999999999999999999999999987643
No 10
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7.8e-91 Score=673.85 Aligned_cols=286 Identities=48% Similarity=0.784 Sum_probs=274.1
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|++++|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~ 81 (294)
T PRK14187 2 TNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEK 81 (294)
T ss_pred cEEeehHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk 161 (294)
T PRK14187 82 INELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGS 161 (294)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999875446899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+++++.
T Consensus 162 ~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~~~~~~- 240 (294)
T PRK14187 162 DAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIEEGG- 240 (294)
T ss_pred EEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999974421
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
..|++|||||+++.++|++||||||||||||++|||+|++++++++.
T Consensus 241 --~~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 287 (294)
T PRK14187 241 --VKKFVGDVDFAEVKKKASAITPVPGGVGPMTIAFLMVNTVIAACNQK 287 (294)
T ss_pred --ccceeCCccHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHHhh
Confidence 12799999999999999999999999999999999999999998764
No 11
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8e-91 Score=674.98 Aligned_cols=287 Identities=49% Similarity=0.828 Sum_probs=275.3
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|+++++++++++++|+++ |++|+||+|+||+||+|..|+++|+|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~ 80 (297)
T PRK14167 2 TEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDT 80 (297)
T ss_pred CeEEeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 589999999999999999999999876 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| ++.|+||||.||+++|++|+++++||
T Consensus 81 I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk 158 (297)
T PRK14167 81 IDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEGA 158 (297)
T ss_pred HHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVE 315 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~ 315 (371)
+|+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+++
T Consensus 159 ~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvGin~~~ 238 (297)
T PRK14167 159 DVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRVD 238 (297)
T ss_pred EEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccC
Confidence 9999999999999999999998 899999999999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 316 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 316 ~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+. +.+|++++|||||+++.++|++||||||||||||++|||+|+++++++++++
T Consensus 239 ~~-~~~g~kl~GDVd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 292 (297)
T PRK14167 239 AD-TEKGYELVGDVEFESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEGV 292 (297)
T ss_pred cc-cccCCceeecCcHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhcCC
Confidence 31 2235589999999999999999999999999999999999999999988765
No 12
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.1e-91 Score=670.75 Aligned_cols=280 Identities=51% Similarity=0.820 Sum_probs=271.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~~a~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14166 2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALI 80 (282)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|. +++|+||||+||+++|++|+++++||+
T Consensus 81 ~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~ 159 (282)
T PRK14166 81 NTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKD 159 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999763 468999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||.+||||++++|+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||||++|||+|+|+.++
T Consensus 160 vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~~~~---- 235 (282)
T PRK14166 160 AVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLES---- 235 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999643
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 236 -g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 281 (282)
T PRK14166 236 -G-KIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL 281 (282)
T ss_pred -C-CeeCCCCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 2 799999999999999999999999999999999999999998754
No 13
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.4e-91 Score=669.91 Aligned_cols=279 Identities=52% Similarity=0.866 Sum_probs=270.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~ik~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14182 2 NLIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALI 80 (282)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc-cccCCHHHHHHHHHHhCCCCCCC
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL-FIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~-~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.| .++ |+||||.||+++|++|+++++||
T Consensus 81 ~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk 158 (282)
T PRK14182 81 ARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGK 158 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999976 445 89999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||||+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+..+
T Consensus 159 ~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~~~~--- 235 (282)
T PRK14182 159 RALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLAD--- 235 (282)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeeceecCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| +++|||||+++.++|+++|||||||||||++|||+|+++++++|.
T Consensus 236 --g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~~~~~~~ 281 (282)
T PRK14182 236 --G-KLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKRTA 281 (282)
T ss_pred --C-CeeCCCCHHHHHhhccEecCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 2 799999999999999999999999999999999999999999884
No 14
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.1e-91 Score=671.33 Aligned_cols=283 Identities=55% Similarity=0.904 Sum_probs=274.5
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|+++++++++++++|+++ |++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 ~~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~ 79 (284)
T PRK14190 1 MMAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELL 79 (284)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 34679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++
T Consensus 80 ~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~ 157 (284)
T PRK14190 80 ALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDIS 157 (284)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||||++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||||++|||+|+|++++
T Consensus 158 Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~~~~- 236 (284)
T PRK14190 158 GKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLEN- 236 (284)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|++
T Consensus 237 ----g-kl~GDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14190 237 ----G-KLCGDVDFDNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAGG 283 (284)
T ss_pred ----C-CeeccCcHHHHhhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 2 8999999999999999999999999999999999999999999875
No 15
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-90 Score=668.22 Aligned_cols=277 Identities=42% Similarity=0.738 Sum_probs=268.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++++++++++++++++++..+|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (278)
T PRK14172 2 GQIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINE 81 (278)
T ss_pred CeEEeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999988733569999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~Gk 159 (278)
T PRK14172 82 IEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGK 159 (278)
T ss_pred HHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999977 57899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+.++
T Consensus 160 ~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~g--- 236 (278)
T PRK14172 160 EVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVNG--- 236 (278)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccccCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999642
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~ 365 (371)
|++|||||+++.++|++||||||||||||++|||+|++++++
T Consensus 237 ----kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~ 278 (278)
T PRK14172 237 ----KITGDVNFDKVIDKASYITPVPGGVGSLTTTLLIKNVCEALK 278 (278)
T ss_pred ----ceeeeccHHHHHhhccEecCCCCCccHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999864
No 16
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.4e-90 Score=667.67 Aligned_cols=279 Identities=47% Similarity=0.775 Sum_probs=271.0
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|.+++||||++|++|++++++++++|+++++.+|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 ~~~~ildGk~ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~ 80 (284)
T PRK14177 1 MSPILLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELL 80 (284)
T ss_pred CCCeEeEhHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 56789999999999999999999999988778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~ 158 (284)
T PRK14177 81 GVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVT 158 (284)
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||||++++|+++|||||+||++|+|+++++++|||||+|+|+|+++++||||||++|||+|+|+
T Consensus 159 Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~---- 234 (284)
T PRK14177 159 GKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP---- 234 (284)
T ss_pred CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 235 ------~~~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 279 (284)
T PRK14177 235 ------GNVGDIEISKAKDKSSFYTPVPGGVGPMTIAVLLLQTLYSFKEHF 279 (284)
T ss_pred ------cccCCcCHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHhcc
Confidence 479999999999999999999999999999999999999997654
No 17
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.5e-90 Score=667.51 Aligned_cols=280 Identities=52% Similarity=0.837 Sum_probs=272.5
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|++++|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (286)
T PRK14184 2 LLLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLI 81 (286)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~ 159 (286)
T PRK14184 82 AELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKK 159 (286)
T ss_pred HHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhcc----CCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQR----EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~----~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|||||++||+|+++||++ +|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+.++
T Consensus 160 vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~~~~ 239 (286)
T PRK14184 160 AVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTDD 239 (286)
T ss_pred EEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeeccCC
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
+++|||||+++.++|+|||||||||||||++|||+|+++++++..|
T Consensus 240 -------~l~GDVdf~~v~~~a~~iTPVPGGVGp~Tva~Ll~N~~~a~~~~~~ 285 (286)
T PRK14184 240 -------GLVGDCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWKERVG 285 (286)
T ss_pred -------CccCCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhC
Confidence 6999999999999999999999999999999999999999987765
No 18
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.1e-90 Score=665.19 Aligned_cols=280 Identities=46% Similarity=0.795 Sum_probs=271.3
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
.+||||++|++|++++++++++|+++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (282)
T PRK14180 2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELI 81 (282)
T ss_pred ceeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999999987789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+++.|+ ..+|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~ 160 (282)
T PRK14180 82 DQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAY 160 (282)
T ss_pred HHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999763 378999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|+.++
T Consensus 161 vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~g---- 236 (282)
T PRK14180 161 AVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG---- 236 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999632
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
|++|||||+++.++|+|||||||||||||++|||+|+++++++++
T Consensus 237 ---kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~ 281 (282)
T PRK14180 237 ---KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN 281 (282)
T ss_pred ---ceeCCcCHHHHHhhccEeccCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 799999999999999999999999999999999999999998764
No 19
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.4e-90 Score=667.86 Aligned_cols=286 Identities=51% Similarity=0.830 Sum_probs=274.4
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|+++++++++++++++|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (297)
T PRK14186 2 ALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEAL 81 (297)
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| ...|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk 159 (297)
T PRK14186 82 IAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAGK 159 (297)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 46799999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||++||+|+++||+++|||||+||++|+|+++++++|||||+|+|+|++++++|||+|++|||+|+|+.+++ +
T Consensus 160 ~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~~~-~ 238 (297)
T PRK14186 160 KAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLPSS-D 238 (297)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996532 1
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
.+| |++|||||+++.++|++||||||||||||++|||+|++++++++.+
T Consensus 239 ~~g-kl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 287 (297)
T PRK14186 239 GKT-RLCGDVDFEEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKRHG 287 (297)
T ss_pred cCC-ceeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhC
Confidence 124 8999999999999999999999999999999999999999987653
No 20
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.9e-90 Score=662.83 Aligned_cols=279 Identities=53% Similarity=0.875 Sum_probs=270.4
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|+++++++++.|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (281)
T PRK14183 2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETI 81 (281)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999999999874489999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|++|+|+++.| +++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (281)
T PRK14183 82 AMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKD 159 (281)
T ss_pred HHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|+++++||||+|++|||+|+|+.++
T Consensus 160 vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~~~~---- 235 (281)
T PRK14183 160 VCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTED---- 235 (281)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccccCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
| |++|||||+++.+++++||||||||||||++|||+|+++++++.
T Consensus 236 -g-kl~GDVd~~~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~ 280 (281)
T PRK14183 236 -G-RLVGDVDFENVAKKCSYITPVPGGVGPMTIAMLLSNTLKAAKNR 280 (281)
T ss_pred -C-CeECCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 2 89999999999999999999999999999999999999999753
No 21
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7.6e-90 Score=665.01 Aligned_cols=280 Identities=47% Similarity=0.787 Sum_probs=267.8
Q ss_pred eeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Q 017438 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHIS 161 (371)
Q Consensus 82 ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~ 161 (371)
+||||++|++|++++++++++| +++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|+
T Consensus 2 ildGk~iA~~i~~~~k~~v~~l----~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~ 77 (287)
T PRK14181 2 LLKGAPAAEHILATIKENISAS----STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIH 77 (287)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999988 679999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEE
Q 017438 162 VFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 241 (371)
Q Consensus 162 ~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~v 241 (371)
+||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+ .++|+||||+||+++|++|+++++||+|
T Consensus 78 ~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~v 156 (287)
T PRK14181 78 RLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHV 156 (287)
T ss_pred HHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEE
Confidence 999999999999999999999999999999999999999999999999763 4679999999999999999999999999
Q ss_pred EEEcCCcccHHHHHHHhccC----CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 242 VVIGRSNIVGMPAALLLQRE----DATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 242 vVIG~s~~VGkpla~lL~~~----gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
+|||||++||||+++||+++ |||||+||++|+|+++++++|||||+|+|+|++|++||||+|++|||+|+|++.+.
T Consensus 157 vViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~~~~~ 236 (287)
T PRK14181 157 AIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVPAA 236 (287)
T ss_pred EEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccccc
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999996431
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
..+|++++|||||+++.++|+|+|||||||||||++|||+|++++++++
T Consensus 237 -~~~g~kl~GDVd~e~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 285 (287)
T PRK14181 237 -NPKGYILVGDVDFNNVVPKCRAITPVPGGVGPMTVAMLMRNTWESYLRH 285 (287)
T ss_pred -cCCCCeeEeccchHHHHhhcccccCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 1224589999999999999999999999999999999999999999865
No 22
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1e-89 Score=663.91 Aligned_cols=284 Identities=54% Similarity=0.878 Sum_probs=275.3
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|+++++++++++++|+++++++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 M~~~ildGk~va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~ 80 (285)
T PRK10792 1 MTAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELL 80 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999988788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~ 158 (285)
T PRK10792 81 ALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTY 158 (285)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|++++
T Consensus 159 Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~~~~- 237 (285)
T PRK10792 159 GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLED- 237 (285)
T ss_pred CCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccccccC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| +++|||||+++.++|+++|||||||||||++|||+|+++++++|++
T Consensus 238 ----g-k~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (285)
T PRK10792 238 ----G-KLVGDVEFETAAERASWITPVPGGVGPMTVATLLENTLQACEEYHD 284 (285)
T ss_pred ----C-CcCCCcCHHHHHhhccCcCCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 2 7999999999999999999999999999999999999999999985
No 23
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.5e-89 Score=662.56 Aligned_cols=281 Identities=46% Similarity=0.828 Sum_probs=270.6
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
++.+||||++|++|+++++++++.|+++ |++|+||+|+||+|++|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 2 ~~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~ 80 (284)
T PRK14193 2 TAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNA 80 (284)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 4679999999999999999999999877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| ...|+||||+||+++|++|+++++|
T Consensus 81 ~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~G 158 (284)
T PRK14193 81 VIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELAG 158 (284)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999976 5679999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhcc--CCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQR--EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~--~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|+|||||++||+|++++|++ +|||||+||++|+|+++++++|||||+|+|+|++|++||||||++|||+|+|++++
T Consensus 159 k~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~~~~ 238 (284)
T PRK14193 159 AHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAGD 238 (284)
T ss_pred CEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccccCC
Confidence 9999999999999999999998 79999999999999999999999999999999999999999999999999999644
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||| +++.++|++||||||||||||++|||+|+++++++..|
T Consensus 239 -----g-kl~GDvd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (284)
T PRK14193 239 -----G-KLVGDVH-PDVWEVAGAVSPNPGGVGPMTRAFLLTNVVERAERRAG 284 (284)
T ss_pred -----C-cEEeecC-HhHHhhCCEEeCCCCChhHHHHHHHHHHHHHHHHHhhC
Confidence 2 8999999 88999999999999999999999999999999987543
No 24
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.9e-89 Score=661.13 Aligned_cols=283 Identities=52% Similarity=0.846 Sum_probs=273.8
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 M~~~ildGk~va~~i~~~lk~~i~~l~~~-g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~ 79 (285)
T PRK14189 1 MTAQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELL 79 (285)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||+||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 157 (285)
T PRK14189 80 ARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLR 157 (285)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|++++++|+|||++|||+|+|+..+
T Consensus 158 Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~~~~- 236 (285)
T PRK14189 158 GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDDA- 236 (285)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999644
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|++++++++..
T Consensus 237 ----g-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~Ll~N~~~a~~~~~~ 283 (285)
T PRK14189 237 ----G-KLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA 283 (285)
T ss_pred ----C-CeeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhc
Confidence 2 8999999999999999999999999999999999999999998764
No 25
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.9e-89 Score=661.00 Aligned_cols=280 Identities=48% Similarity=0.811 Sum_probs=271.5
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
++++||||++|++|+++++++++.|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus 7 ~~~ildGk~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~ 86 (287)
T PRK14176 7 ESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLE 86 (287)
T ss_pred ceEEEEhHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 37899999999999999999999998877899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| +++|+||||+||+++|++|+++++|
T Consensus 87 ~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~G 164 (287)
T PRK14176 87 LIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIEG 164 (287)
T ss_pred HHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999976 5689999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~ 318 (371)
|+|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+
T Consensus 165 k~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~~~--- 241 (287)
T PRK14176 165 KNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEE--- 241 (287)
T ss_pred CEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 319 ~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
| |++|||||+++.++|+++|||||||||||++|||+|+++++++.
T Consensus 242 ---g-kl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~ 286 (287)
T PRK14176 242 ---D-KVYGDVDFENVIKKASLITPVPGGVGPLTIAMLMKHVLMCAEKS 286 (287)
T ss_pred ---C-CccCCcCHHHHHhhceEcCCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 2 89999999999999999999999999999999999999998754
No 26
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.1e-89 Score=657.33 Aligned_cols=280 Identities=49% Similarity=0.783 Sum_probs=272.2
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++||||++|++|++++++++++|+++.|++|+|++|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (285)
T PRK14191 2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLI 81 (285)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999999999987789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (285)
T PRK14191 82 KDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKD 159 (285)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSP 320 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~ 320 (371)
|+|||||++||+|+|++|+++|||||+||++|+++++++++|||||+|+|+|++++++|||||++|||+|+|++++
T Consensus 160 vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~~~~---- 235 (285)
T PRK14191 160 VVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLND---- 235 (285)
T ss_pred EEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeecccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 321 RGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 321 ~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
| |++|||||+++.+++++||||||||||||++|||+|+++++++..
T Consensus 236 -g-klvGDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~ 281 (285)
T PRK14191 236 -G-RLVGDVDFENVAPKASFITPVPGGVGPMTIVSLLENTLIAAEKRQ 281 (285)
T ss_pred -C-ceeccccHHHHhhhccEEecCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 2 899999999999999999999999999999999999999998754
No 27
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.9e-88 Score=655.11 Aligned_cols=282 Identities=52% Similarity=0.883 Sum_probs=274.2
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++++++++++++++++++|++|+||+|+||+|++|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~ildGk~ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~ 81 (284)
T PRK14179 2 TEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDL 81 (284)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| .++|+||||.||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 159 (284)
T PRK14179 82 IERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEGK 159 (284)
T ss_pred HHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 67899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||+|++||+|+|++|+++|||||+||++|+++++++++|||||+++|+|++++++|+++|++|||+|+|++.+
T Consensus 160 ~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~~~~--- 236 (284)
T PRK14179 160 HAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDEN--- 236 (284)
T ss_pred EEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEEecceecCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
| |++|||||+++.++|++||||||||||||++|||+|+++++++|+-
T Consensus 237 --g-kl~GDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14179 237 --G-KLIGDVDFDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSLH 283 (284)
T ss_pred --C-CeecCccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 2 8999999999999999999999999999999999999999999863
No 28
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.7e-88 Score=654.65 Aligned_cols=280 Identities=49% Similarity=0.821 Sum_probs=266.9
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|.+++||||++|++|++++++++++| +++|+||+|+||+|++|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 1 m~~~il~Gk~vA~~i~~~l~~~v~~l----~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~ 76 (287)
T PRK14173 1 MAARELSGPPAAEAVYAELRARLAKL----PFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELL 76 (287)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999988 37899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .+.|+||||+||+++|++|+++++
T Consensus 77 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~ 154 (287)
T PRK14173 77 ELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLA 154 (287)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 467999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|+++|||||+||++|+|+++++++|||||+|+|+|+++++||||+|++|||+|+|++.+.
T Consensus 155 Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~~~~~ 234 (287)
T PRK14173 155 GKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVGGN 234 (287)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996210
Q ss_pred CCCCCce--eecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 318 KSPRGYR--LVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 318 ~~~~g~k--l~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+| | ++|||| +++.++|++||||||||||||++|||+|+++++++..
T Consensus 235 ---~g-k~~l~GDVd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (287)
T PRK14173 235 ---GG-RDILTGDVH-PEVAEVAGALTPVPGGVGPMTVAMLMANTVIAALRRR 282 (287)
T ss_pred ---CC-ceeeecccc-HhHHhhCcEEecCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 13 5 999999 6789999999999999999999999999999998754
No 29
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.2e-88 Score=654.95 Aligned_cols=288 Identities=54% Similarity=0.876 Sum_probs=274.8
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~il~Gk~iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (295)
T PRK14174 2 LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKI 81 (295)
T ss_pred EEEeHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 48999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCE
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKR 240 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~ 240 (371)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+++.|+..++|+||||.||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~ 161 (295)
T PRK14174 82 EDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKH 161 (295)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999998753478999999999999999999999999
Q ss_pred EEEEcCCcccHHHHHHHhcc----CCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQR----EDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~----~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
|+|||||++||+|+++||++ +|++|++||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|++++++
T Consensus 162 vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~vk~GavVIDVgi~~~~~ 241 (295)
T PRK14174 162 CVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIED 241 (295)
T ss_pred EEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHcCCCCEEEEeecccccc
Confidence 99999999999999999988 78999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
+++..|+|++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 242 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~ 293 (295)
T PRK14174 242 PSTKSGYRLVGDVDYEGVSAKASAITPVPGGVGPMTIAMLLKNTLQSFERVN 293 (295)
T ss_pred ccccCCCceECCcCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 3333455899999999999999999999999999999999999999998764
No 30
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-87 Score=650.64 Aligned_cols=284 Identities=51% Similarity=0.840 Sum_probs=273.6
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|.+++||||++|++++++++++++.|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 1 m~~~il~Gk~ia~~i~~~~~~~v~~l~~~-g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~ 79 (286)
T PRK14175 1 MVAKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVL 79 (286)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 44679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 80 ~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~ 157 (286)
T PRK14175 80 NELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLE 157 (286)
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||||++||+|++++|.++||+||+||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+++..+
T Consensus 158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~~~~- 236 (286)
T PRK14175 158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDEN- 236 (286)
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCcCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998544
Q ss_pred CCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 318 KSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 318 ~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| |++|||||+++.++++++|||||||||||++|||+|+++++++..+.
T Consensus 237 ----g-kl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~~~~ 284 (286)
T PRK14175 237 ----G-KLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGI 284 (286)
T ss_pred ----C-CeecCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 89999999999999999999999999999999999999999876653
No 31
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.6e-87 Score=649.72 Aligned_cols=286 Identities=52% Similarity=0.862 Sum_probs=274.8
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVL 157 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~ 157 (371)
|++++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|++
T Consensus 2 m~~~il~Gk~iA~~i~~~lk~~i~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~ 80 (301)
T PRK14194 2 MSAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLL 80 (301)
T ss_pred CCCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 55679999999999999999999999877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCC
Q 017438 158 KHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIK 237 (371)
Q Consensus 158 ~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~ 237 (371)
+.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++
T Consensus 81 ~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~ 158 (301)
T PRK14194 81 ALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLT 158 (301)
T ss_pred HHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~ 317 (371)
||+|+|||+|++||+|++.+|+++|++||+||++|+++++++++|||||+++|.|++++++|+|+|++|||+|+|++.+.
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~~~~~ 238 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRIDDD 238 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcEEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996431
Q ss_pred CCCCC-ceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 318 KSPRG-YRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 318 ~~~~g-~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| +|++|||||+++.++|++||||||||||||++|||+|+++++++|+..
T Consensus 239 ----g~~kl~GDvdf~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~~ 288 (301)
T PRK14194 239 ----GRSRLVGDVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAHA 288 (301)
T ss_pred ----CCcceecccchHHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 2 279999999999999999999999999999999999999999998754
No 32
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.8e-86 Score=639.68 Aligned_cols=273 Identities=51% Similarity=0.839 Sum_probs=265.8
Q ss_pred eeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Q 017438 82 VIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHIS 161 (371)
Q Consensus 82 ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~ 161 (371)
+||||++|++|+++++++++++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|+
T Consensus 2 il~Gk~~a~~i~~~~~~~v~~l----g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~ 77 (279)
T PRK14178 2 ILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIR 77 (279)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999987 789999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEE
Q 017438 162 VFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRA 241 (371)
Q Consensus 162 ~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~v 241 (371)
+||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||+|
T Consensus 78 ~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~V 155 (279)
T PRK14178 78 RLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKRA 155 (279)
T ss_pred HHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEE
Confidence 99999999999999999999999999999999999999999999999976 5789999999999999999999999999
Q ss_pred EEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCC
Q 017438 242 VVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPR 321 (371)
Q Consensus 242 vVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~ 321 (371)
+|+|+|..||+|++++|.++||+||+||++|+++++++++|||||+|+|+|++|+++|+|||++|||+|+++.++
T Consensus 156 ~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~~~g----- 230 (279)
T PRK14178 156 VVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVNG----- 230 (279)
T ss_pred EEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccccCC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999632
Q ss_pred CceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHH
Q 017438 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRV 367 (371)
Q Consensus 322 g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~ 367 (371)
|++|||||+++.++++++|||||||||||++|||+|++++++++
T Consensus 231 --kl~GDvdf~~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 274 (279)
T PRK14178 231 --KLCGDVDFDAVKEIAGAITPVPGGVGPMTIATLMENTFDAAKMR 274 (279)
T ss_pred --CCcCCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999864
No 33
>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=4e-86 Score=671.94 Aligned_cols=292 Identities=53% Similarity=0.901 Sum_probs=286.3
Q ss_pred ccceeeecHHHHHHHHHHHHHHHHHhHhcc-CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHH
Q 017438 78 ASAKVIDGKAVAKQIRDEITGEVSRMKDAI-GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEV 156 (371)
Q Consensus 78 m~a~ildGk~la~~i~~~ik~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el 156 (371)
|++.||+||++|++++++++++|+.+|++. +++|.|+|||||++++|..|+|+|.|+++++||++.+++||++++|-||
T Consensus 1 ~~a~IL~Gk~la~kvr~~v~~eI~~ik~~~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~el 80 (935)
T KOG4230|consen 1 MVAEILSGKELARKVREDVAEEIQSIKEHHPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGEL 80 (935)
T ss_pred CcchhhccHHHHHHHHHHHHHHHHHHHhhCCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHH
Confidence 467899999999999999999999999887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCC
Q 017438 157 LKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDI 236 (371)
Q Consensus 157 ~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l 236 (371)
+..|.+||+|+.||||+||+|||.|||++.+.++|+|+||||||+..|.|+|..++.++.|+||||.|||+||+++++.+
T Consensus 81 l~~I~~lNeD~tvHGiiVQLPLp~hide~~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v 160 (935)
T KOG4230|consen 81 LREIKALNEDPTVHGIIVQLPLPAHIDEDTVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFV 160 (935)
T ss_pred HHHHHhccCCCccceEEEeccCccccchhhHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~ 316 (371)
.||++||+|||.+||.|++.+|...|+|||+|||+|+++.+++.+|||||.|+|.|+||+.||+|||++|||||+|++.|
T Consensus 161 ~Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvpD 240 (935)
T KOG4230|consen 161 AGKNAVVLGRSKIVGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVPD 240 (935)
T ss_pred ccceeEEEecccccCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 317 AKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 317 ~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
+++..|+|++|||||+++.+++++||||||||||||+||||+|++++++|+.-
T Consensus 241 ~~Kksg~klvGDVdfe~Akevas~ITPVPGGVGPMTVAMLmqNtveaAKR~r~ 293 (935)
T KOG4230|consen 241 PSKKSGFKLVGDVDFESAKEVASFITPVPGGVGPMTVAMLMQNTVEAAKRQRE 293 (935)
T ss_pred CCCcccceEeeecchHhhhhhhhccccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998763
No 34
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-84 Score=632.38 Aligned_cols=287 Identities=56% Similarity=0.913 Sum_probs=273.0
Q ss_pred ceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Q 017438 80 AKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKH 159 (371)
Q Consensus 80 a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~ 159 (371)
+++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 2 ~~il~Gk~~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 81 (296)
T PRK14188 2 ATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLAL 81 (296)
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 57999999999999999999999998778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCC
Q 017438 160 ISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGK 239 (371)
Q Consensus 160 I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK 239 (371)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+++.| .++|+||||+||+++|++|+++++||
T Consensus 82 i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~Gk 159 (296)
T PRK14188 82 IARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSGL 159 (296)
T ss_pred HHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999976 67899999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
+|+|||||+.+|+|+|.+|+++|++|++||++|+++++++++|||||+++|.|++++++|+++|++|||+|+|++++..+
T Consensus 160 ~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~~~~~~~ 239 (296)
T PRK14188 160 NAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIPAPEK 239 (296)
T ss_pred EEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999642111
Q ss_pred CCCc-eeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 320 PRGY-RLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 320 ~~g~-kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
..|+ +++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 240 ~~g~~~l~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 289 (296)
T PRK14188 240 GEGKTRLVGDVAFAEAAEVAGAITPVPGGVGPMTIACLLANTLTAACRAA 289 (296)
T ss_pred cCCCceeeCCCCHHHHHhhccEecCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 1133 799999999999999999999999999999999999999998754
No 35
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.2e-81 Score=604.67 Aligned_cols=282 Identities=48% Similarity=0.804 Sum_probs=272.4
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
++++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|+++|+++||+++++.||++++++||++
T Consensus 2 ~~~~l~gk~~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~ 81 (283)
T PRK14192 2 MALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLA 81 (283)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence 35799999999999999999999999887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|++|.|+++.| ++.|.||||.|++++|++|+++++|
T Consensus 82 ~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 82 KIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAG 159 (283)
T ss_pred HHHHHhCCCCCCEEEEeCCCccccCHHHHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999876 5789999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAK 318 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~ 318 (371)
|+|+|||||++||||++++|+++||+||+|||+++++.+.+++|||||+|||+|++++.+|+++|++|||+|||++++
T Consensus 160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~lk~gavViDvg~n~~~~-- 237 (283)
T PRK14192 160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRDG-- 237 (283)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHcCCCCEEEEEEEeecCC--
Confidence 999999999988999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhc
Q 017438 319 SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 319 ~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~ 369 (371)
+++|||||+++.+++++||||||||||||++|||+|+++++++.+|
T Consensus 238 -----~~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~n~~~~~~~~~~ 283 (283)
T PRK14192 238 -----GGVGDIELQGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAEKALG 283 (283)
T ss_pred -----CCcccccHHHhhccceEeCCCCCcChHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999999999999999999988764
No 36
>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.5e-79 Score=580.89 Aligned_cols=293 Identities=62% Similarity=0.935 Sum_probs=282.8
Q ss_pred cceeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Q 017438 79 SAKVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLK 158 (371)
Q Consensus 79 ~a~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~ 158 (371)
.+.+++||.+|+.+++++..+++.+++.+|..|+|+.++||+||+|+.|+.+|+|+|+++||.++.+.||+..+++++++
T Consensus 7 ~~~viagk~~a~~i~~~i~~e~~~~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~ 86 (309)
T KOG0089|consen 7 TAVVIAGKVAATFIRQEIANEVEGMKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELES 86 (309)
T ss_pred ceEEEehhHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCC
Q 017438 159 HISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKG 238 (371)
Q Consensus 159 ~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~G 238 (371)
.|.++|+|++||||+||+|+|.|++++++++.++|+|||||+|+.|.|+|...++.+.|+||||.||+|+|+++++.+.|
T Consensus 87 ~i~~~N~d~sV~GilV~~pv~~h~~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~G 166 (309)
T KOG0089|consen 87 AIAEANNDPSVHGILVQLPVPQHIQEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYG 166 (309)
T ss_pred HHHHhcCCCceeeEEEEeeccccccHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecC
Confidence 99999999999999999999999999999999999999999999999999988777889999999999999999999999
Q ss_pred CEEEEEcCCcccHHHHHHHhccC--------CCeEEEEeCCCCC--HHhhccCCcEEEEccCCCCcccCCCcCCCeEEEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE--------DATVSIVHSRTKN--PEEITRQADIIISAVGQPNMVRGSWIKPGAVIID 308 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~--------gAtVtv~h~~t~~--l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVID 308 (371)
|+++|+|||++||+|+|++|.+. .||||++||.|++ ++.++++|||+|+|+|.|++|+.||||+|+.|||
T Consensus 167 Kn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~Ik~Ga~vid 246 (309)
T KOG0089|consen 167 KNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMIKPGAAVID 246 (309)
T ss_pred ceEEEEcccccccchHHHHHhhcCCcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCcccccceeecCceeEe
Confidence 99999999999999999999998 6899999999965 5899999999999999999999999999999999
Q ss_pred eeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 309 VGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 309 vgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
+|+|++.++++..++||+||||||++.++|++||||||||||||++|||+|+++++++.+..+
T Consensus 247 vgin~v~dp~~a~~~klvgdvdFe~~~~kag~itpVPggvGpmTiAMLl~Ntl~~ak~v~~~~ 309 (309)
T KOG0089|consen 247 VGINRVHDPSTAVGIKLVGDVDFEEASKKAGAITPVPGGVGPMTIAMLLRNTLRAAKRVFLSK 309 (309)
T ss_pred cCCCcccccccceeeEEeeeccHHHhhhhcCccccCCCCCCchhHHHHHHHHHHHHHHHhccC
Confidence 999999998887788999999999999999999999999999999999999999999877653
No 37
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=100.00 E-value=3.3e-53 Score=379.81 Aligned_cols=160 Identities=62% Similarity=1.018 Sum_probs=138.9
Q ss_pred CcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhcc
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITR 280 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~ 280 (371)
||+|+|+|+.| +++|+||||+||+++|++|+++++||+|+|||||++||+|++++|+++|||||+||++|++++++++
T Consensus 1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 79999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHH
Q 017438 281 QADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNT 360 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~ 360 (371)
+|||||+|+|+|++|++||||||++|||+|+++... +++++|||||++++++++++|||||||||||++|||+|+
T Consensus 79 ~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~~~~-----~~~~~GDv~~~~~~~~a~~itPvPgGVGplT~a~L~~N~ 153 (160)
T PF02882_consen 79 RADIVVSAVGKPNLIKADWIKPGAVVIDVGINYVPG-----DGKLVGDVDFESVKEKASAITPVPGGVGPLTVAMLMKNL 153 (160)
T ss_dssp TSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEEETT-----TTEEEESB-HHHHHTTCSEEE-SSSSCHHHHHHHHHHHH
T ss_pred eccEEeeeeccccccccccccCCcEEEecCCccccc-----cceeeecccHHHhhccceEEeeCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999822 239999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 017438 361 LTSAKRV 367 (371)
Q Consensus 361 v~a~~~~ 367 (371)
+++++++
T Consensus 154 v~a~~~~ 160 (160)
T PF02882_consen 154 VKAAKRQ 160 (160)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999874
No 38
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=100.00 E-value=7.3e-48 Score=353.83 Aligned_cols=158 Identities=34% Similarity=0.483 Sum_probs=145.1
Q ss_pred cccccCccCcchhhhhccCCC-------ccccccCCHHHHHHHHHHhCC---------CCCCCEEEEEcCCcccHHHHHH
Q 017438 193 MEKDVDGFHPLNIGRLAMRGR-------EPLFIPCTPKGCIELLHRYGF---------DIKGKRAVVIGRSNIVGMPAAL 256 (371)
Q Consensus 193 p~KDVDgl~~~N~G~l~~g~~-------~~~~~PcTa~gvi~lL~~~~i---------~l~GK~vvVIG~s~~VGkpla~ 256 (371)
|+|||||+|+.|+|+|+.|.. .++|+||||+||+++|++|++ +++||+|+|||||++||+|+++
T Consensus 1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence 789999999999999987631 158999999999999999977 8999999999999999999999
Q ss_pred HhccCCCeEEEE---------------eCCC--CC----HHhhccCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeecCC
Q 017438 257 LLQREDATVSIV---------------HSRT--KN----PEEITRQADIIISAVGQPNM-VRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 257 lL~~~gAtVtv~---------------h~~t--~~----l~~~l~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin~~ 314 (371)
||+++|||||+| |++| ++ +++++++|||||+|+|+|++ |++||||||++|||+|++.
T Consensus 81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~- 159 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK- 159 (197)
T ss_pred HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc-
Confidence 999999999999 6776 46 88999999999999999999 9999999999999999873
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHh
Q 017438 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 315 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~ 368 (371)
|+| +++.++|+++||| |||||++|||+|+++++++++
T Consensus 160 -------------dvd-~~v~~~as~iTPv---VGpvTva~L~~Nlv~~~~~~~ 196 (197)
T cd01079 160 -------------NFE-PSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQH 196 (197)
T ss_pred -------------Ccc-HhHHhhcCEeCCC---cCHHHHHHHHHHHHHHHHHhc
Confidence 455 6789999999998 999999999999999998775
No 39
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=100.00 E-value=2.8e-41 Score=296.77 Aligned_cols=137 Identities=36% Similarity=0.599 Sum_probs=129.8
Q ss_pred CccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCC
Q 017438 213 REPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 213 ~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p 292 (371)
.++.|+||||+|++++|++|+++++||+|+|+|||..+|+|++.+|.++|++|++||++|+++++++++|||||+|+|+|
T Consensus 3 ~~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 3 CTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 293 NMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 293 ~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++|+++|+|||++|||+|+++. +|+++.++++++|||||||||||++|||+|+++++
T Consensus 83 ~~i~~~~ikpGa~Vidvg~~~~---------------~~~~~~~~a~~~tPvpgGVGp~T~a~L~~n~~~~~ 139 (140)
T cd05212 83 EKVPTEWIKPGATVINCSPTKL---------------SGDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSV 139 (140)
T ss_pred CccCHHHcCCCCEEEEcCCCcc---------------cchhhHhhceEEcCCCCCchHHHHHHHHHHHHHhc
Confidence 9999999999999999998862 14567889999999999999999999999999875
No 40
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=100.00 E-value=4.3e-41 Score=303.73 Aligned_cols=168 Identities=64% Similarity=1.041 Sum_probs=157.7
Q ss_pred cccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 193 MEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 193 p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+|||||++..|.|+++.+ ...|+|||+.+++++++++..+++||+|+|||+|+++|++++.+|.++|++|++++|++
T Consensus 1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 6899999999999999854 57899999999999999999999999999999999889999999999999999999999
Q ss_pred CCHHhhccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHH
Q 017438 273 KNPEEITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMT 352 (371)
Q Consensus 273 ~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T 352 (371)
.++.+.+++|||||+|||+|++|+.+|++++.++||++.+++.+ +.+| |++||+||+.+.+++.++||+||||||+|
T Consensus 79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~prdvd--~~~~-~~~G~~d~~~~~~~~~~~~~~pggvgp~t 155 (168)
T cd01080 79 KNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRVPD--KSGG-KLVGDVDFESAKEKASAITPVPGGVGPMT 155 (168)
T ss_pred hhHHHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCCccc--ccCC-CeeCCcCHHHHHhhccCcCCCCCcChHHH
Confidence 99999999999999999999999999999999999999999765 2234 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 017438 353 IAMLLSNTLTSAK 365 (371)
Q Consensus 353 ~amLl~n~v~a~~ 365 (371)
+++||+|++++++
T Consensus 156 ~a~l~~n~~~~~~ 168 (168)
T cd01080 156 VAMLMKNTVEAAK 168 (168)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 41
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=100.00 E-value=3.1e-34 Score=244.80 Aligned_cols=117 Identities=56% Similarity=0.905 Sum_probs=103.4
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhccCCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAIGVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHI 160 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I 160 (371)
++|+||++|++|+++++++++.|+++ |++|+|++|+||+|++|..|+++|.|.|+++||+++.+.||++++++|+++.|
T Consensus 1 ~iL~Gk~va~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i 79 (117)
T PF00763_consen 1 KILDGKPVAKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELI 79 (117)
T ss_dssp EE--HHHHHHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHH
Confidence 48999999999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccC
Q 017438 161 SVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198 (371)
Q Consensus 161 ~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVD 198 (371)
++||+|++||||+||+|||+|+++.+++++|+|+||||
T Consensus 80 ~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVD 117 (117)
T PF00763_consen 80 EKLNEDPSVHGILVQLPLPKHIDERKILEAIDPEKDVD 117 (117)
T ss_dssp HHHHH-TT-SEEEEESSSSTTSHHHHHHHTS-GGGBTT
T ss_pred HHHhCCCCCCEEEEcCCCCCCccHHHHHhccCcccCCC
Confidence 99999999999999999999999999999999999998
No 42
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=99.91 E-value=2e-23 Score=202.54 Aligned_cols=225 Identities=16% Similarity=0.168 Sum_probs=174.8
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhC
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAV 191 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I 191 (371)
.-++|+.-+--.-=..-+.+++++|+++.|..|+-+ +++++|.+.++.+.. .++.|++|++|+|. ...++++.+
T Consensus 8 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~~D~~ 84 (284)
T PRK12549 8 AGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAER-MGFAGLNITHPCKQ--AVIPHLDEL 84 (284)
T ss_pred EEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHh-cCCCEEEECcCCHH--HHHHHhccC
Confidence 345665433333344667899999999999999632 357889999999875 48999999999997 556788888
Q ss_pred Cc-ccccCccCc-ch-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEE
Q 017438 192 SM-EKDVDGFHP-LN-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSI 267 (371)
Q Consensus 192 ~p-~KDVDgl~~-~N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv 267 (371)
+| .+.+.+++. ++ -|++. |+|+|+ .|+++.|+....++++|+|+|||+|++ |++++..|...|+ +|++
T Consensus 85 ~~~A~~iGAvNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~I~I 156 (284)
T PRK12549 85 SDDARALGAVNTVVFRDGRRI-GHNTDW------SGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVERLTI 156 (284)
T ss_pred CHHHHHhCCceEEEecCCEEE-EEcCCH------HHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEE
Confidence 88 788777733 33 34554 666665 999999998777899999999999997 9999999999997 7999
Q ss_pred EeCCCC----------------------CHHhhccCCcEEEEccCC-----CC-cccCCCcCCCeEEEEeeecCCCCCCC
Q 017438 268 VHSRTK----------------------NPEEITRQADIIISAVGQ-----PN-MVRGSWIKPGAVIIDVGINPVEDAKS 319 (371)
Q Consensus 268 ~h~~t~----------------------~l~~~l~~ADIVIsAvG~-----p~-~v~~d~ik~gavVIDvgin~~~~~~~ 319 (371)
++|+.. ++.+.++++|+||++|+. +. .++.++++++.+|+|+.|+|.+|
T Consensus 157 ~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T--- 233 (284)
T PRK12549 157 FDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLET--- 233 (284)
T ss_pred ECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCC---
Confidence 998631 223356789999999642 22 26678899999999999999877
Q ss_pred CCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 320 PRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 320 ~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+|.. .++..|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 234 ----~ll~------~A~~~G~--~~~~G~~-----ML~~Qa~~~f~~wtg~ 267 (284)
T PRK12549 234 ----ELLR------AARALGC--RTLDGGG-----MAVFQAVDAFELFTGR 267 (284)
T ss_pred ----HHHH------HHHHCCC--eEecCHH-----HHHHHHHHHHHHhcCC
Confidence 4554 3566787 4566777 9999999999999985
No 43
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.90 E-value=3e-23 Score=201.50 Aligned_cols=223 Identities=20% Similarity=0.283 Sum_probs=173.3
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 193 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 193 (371)
.-++|+.-+--.-=..-+.+++++|+++.|..|+ +.+++|.+.++.++. .++.|++|++|+|. +..++++.++|
T Consensus 12 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~ld~~~~~ 86 (289)
T PRK12548 12 LGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFD--IPVDKVPDAIKAIKT-FNMRGANVTMPCKS--EAAKYMDELSPA 86 (289)
T ss_pred EEEEcCCcccccCHHHHHHHHHHcCCCEEEEEEe--cCHHHHHHHHHHHHH-CCCCEEEECccCHH--HHHHHhhcCCHH
Confidence 3455654322222345678899999999999996 778899999999986 48999999999987 56778888888
Q ss_pred ccccCccCc-ch-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeC
Q 017438 194 EKDVDGFHP-LN-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHS 270 (371)
Q Consensus 194 ~KDVDgl~~-~N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~ 270 (371)
.+-+..++. ++ -|++. |+|+|+ .|+++.|++++.+++||+++|+|+|++ |++++..|...|++ |++++|
T Consensus 87 A~~iGavNTi~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R 158 (289)
T PRK12548 87 ARIIGAVNTIVNDDGKLT-GHITDG------LGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNI 158 (289)
T ss_pred HHHhCceeEEEeECCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeC
Confidence 777777633 23 35554 666665 999999999988999999999999997 99999999999985 999998
Q ss_pred CC---CC---------------------------HHhhccCCcEEEEccC---CCC----cc-cCCCcCCCeEEEEeeec
Q 017438 271 RT---KN---------------------------PEEITRQADIIISAVG---QPN----MV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 271 ~t---~~---------------------------l~~~l~~ADIVIsAvG---~p~----~v-~~d~ik~gavVIDvgin 312 (371)
+. .. +++.+..+|+||++|+ .|+ .+ +.+++.++.+|+|+.|+
T Consensus 159 ~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 238 (289)
T PRK12548 159 KDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYN 238 (289)
T ss_pred CchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCC
Confidence 63 11 1123356799998885 232 24 45789999999999999
Q ss_pred CCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 313 PVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 313 ~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|.+| +|+. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 239 P~~T-------~ll~------~A~~~G~--~~~~G~~-----ML~~Qa~~~f~lwtg~ 276 (289)
T PRK12548 239 PKKT-------KLLE------DAEAAGC--KTVGGLG-----MLLWQGAEAYKLYTGK 276 (289)
T ss_pred CCCC-------HHHH------HHHHCCC--eeeCcHH-----HHHHHHHHHHHHhcCC
Confidence 9887 4554 3566787 5677787 9999999999999985
No 44
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=99.90 E-value=3.6e-23 Score=201.35 Aligned_cols=221 Identities=19% Similarity=0.216 Sum_probs=171.6
Q ss_pred EeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc
Q 017438 117 LVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK 195 (371)
Q Consensus 117 ~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K 195 (371)
++|+.-+--.-=..-+.+++++|+++.|..|+ +++++|.+.++.++.. ++.|++|++|+|. ...++++.+++ .|
T Consensus 12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVTiP~K~--~~~~~~D~l~~~A~ 86 (288)
T PRK12749 12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNKQ--LACEYVDELTPAAK 86 (288)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCeEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhccCCHHHH
Confidence 45653322223346688999999999999996 7888999999999764 7999999999987 55778888888 88
Q ss_pred ccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 196 DVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 196 DVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
.+.+++.+ + .|++. |+|+|+ .|+++.|++.+++++||+++|+|+|++ +|+++..|..+|+ .|+|++|+.
T Consensus 87 ~iGAVNTv~~~~g~l~-G~NTD~------~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 87 LVGAINTIVNDDGYLR-GYNTDG------TGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred HhCceeEEEccCCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCc
Confidence 87776433 3 35554 665665 999999999999999999999999998 9999999998896 899999973
Q ss_pred C---C--------------------H------HhhccCCcEEEEccCC---CC----c-ccCCCcCCCeEEEEeeecCCC
Q 017438 273 K---N--------------------P------EEITRQADIIISAVGQ---PN----M-VRGSWIKPGAVIIDVGINPVE 315 (371)
Q Consensus 273 ~---~--------------------l------~~~l~~ADIVIsAvG~---p~----~-v~~d~ik~gavVIDvgin~~~ 315 (371)
. . + .+.+.++|+||++|+. |+ . ++.++++++.+|+|+.|+|.+
T Consensus 159 ~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~ 238 (288)
T PRK12749 159 EFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM 238 (288)
T ss_pred cHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCcc
Confidence 1 0 1 1134578999998862 32 1 244568899999999999988
Q ss_pred CCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 316 DAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 316 ~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
| +|.. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 239 T-------~ll~------~A~~~G~--~~~~Gl~-----ML~~Qa~~~f~lwtg~ 273 (288)
T PRK12749 239 T-------KLLQ------QAQQAGC--KTIDGYG-----MLLWQGAEQFTLWTGK 273 (288)
T ss_pred C-------HHHH------HHHHCCC--eEECCHH-----HHHHHHHHHHHHhcCC
Confidence 7 4555 3566787 4556676 9999999999999985
No 45
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=99.89 E-value=1.2e-22 Score=196.25 Aligned_cols=225 Identities=14% Similarity=0.163 Sum_probs=174.6
Q ss_pred CCCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHH
Q 017438 108 GVVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSI 187 (371)
Q Consensus 108 g~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i 187 (371)
+..++|..=++|+. -|.+-. .-+.+++++|+++.|..|+ .++|.+.++.++.. ++.|++|++|++. ...++
T Consensus 6 ~~~~~~~~gliG~P-~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~~-~~~G~nVT~P~K~--~~~~~ 76 (272)
T PRK12550 6 NKDTQLCISLAARP-SNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRAL-GIRGCAVSMPFKE--AVIPL 76 (272)
T ss_pred CCCceEEEEEEccc-hhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHH
Confidence 34567666677864 555555 7889999999999999995 46788888888763 7999999999997 55778
Q ss_pred HhhCCc-ccccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-
Q 017438 188 LNAVSM-EKDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA- 263 (371)
Q Consensus 188 ~~~I~p-~KDVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA- 263 (371)
++.++| .+.+.+++.+ + -|++. |+|+|+ .|+++.|++++.+ .+|+|+|+|+|++ +|+++..|.+.|+
T Consensus 77 lD~l~~~A~~iGAVNTi~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~~~g~~ 147 (272)
T PRK12550 77 VDELDPSAQAIESVNTIVNTDGHLK-AYNTDY------IAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALRDAGFT 147 (272)
T ss_pred hhcCCHHHHHhCCeeEEEeeCCEEE-EEecCH------HHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHHHCCCC
Confidence 888888 7887776332 3 34443 555555 9999999988875 4789999999998 9999999999997
Q ss_pred eEEEEeCCCCCHH-----------hhc--cCCcEEEEccC---CCC------cccCCCcCCCeEEEEeeecCCCCCCCCC
Q 017438 264 TVSIVHSRTKNPE-----------EIT--RQADIIISAVG---QPN------MVRGSWIKPGAVIIDVGINPVEDAKSPR 321 (371)
Q Consensus 264 tVtv~h~~t~~l~-----------~~l--~~ADIVIsAvG---~p~------~v~~d~ik~gavVIDvgin~~~~~~~~~ 321 (371)
+|+|++|+.+..+ +.+ ..+|+||++|+ .++ .++.++++++.+|+|+.|+|.+|
T Consensus 148 ~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T----- 222 (272)
T PRK12550 148 DGTIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAET----- 222 (272)
T ss_pred EEEEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccC-----
Confidence 6999999742211 111 45899999886 221 26678899999999999999887
Q ss_pred CceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 322 GYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 322 g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+|.. .++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 223 --~ll~------~A~~~G~--~~i~Gl~-----MLi~Qa~~~f~lwtg~ 256 (272)
T PRK12550 223 --PLIR------YARARGK--TVITGAE-----VIALQAVEQFVLYTGV 256 (272)
T ss_pred --HHHH------HHHHCcC--eEeCCHH-----HHHHHHHHHHHHHhCC
Confidence 4554 3566777 4567777 9999999999999985
No 46
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=99.89 E-value=7.3e-23 Score=197.36 Aligned_cols=208 Identities=19% Similarity=0.288 Sum_probs=167.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc-h-hh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL-N-IG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~-N-~G 206 (371)
.-+.+++++|+++.|..|. +.+++|.+.++.+... ++.|++|++|++. +..++++.++| .+.+..++.+ + -|
T Consensus 23 ~hn~~~~~~gl~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A~~igavNtv~~~~g 97 (278)
T PRK00258 23 IHNAAFKQLGLDGVYLAIL--VPPEDLEDAVKGFFAL-GGRGANVTVPFKE--AAFALADELSERARLIGAVNTLVLEDG 97 (278)
T ss_pred HHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhC-CCCEEEECcCCHH--HHHHHhhcCCHHHHHhCCceEEEeeCC
Confidence 4588999999999999995 7788999999999875 7999999999987 56778888888 7887776433 3 34
Q ss_pred hhccCCCccccccCCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCCC----------
Q 017438 207 RLAMRGREPLFIPCTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTKN---------- 274 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~~---------- 274 (371)
++. |+|+++ .|+++.|++ .+.++++|+|+|+|+|++ |+.++..|..+| ++|++++|+...
T Consensus 98 ~l~-G~NTD~------~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~ 169 (278)
T PRK00258 98 RLI-GDNTDG------IGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA 169 (278)
T ss_pred EEE-EEcccH------HHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 443 555555 999999986 578999999999999996 999999999999 699999987321
Q ss_pred ---------HHhhccCCcEEEEccCCCC-------cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhc
Q 017438 275 ---------PEEITRQADIIISAVGQPN-------MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVA 338 (371)
Q Consensus 275 ---------l~~~l~~ADIVIsAvG~p~-------~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a 338 (371)
+.+.+.++||||++|+... .+..++++++.+|+|+.|+|.+| .|.. .+++.
T Consensus 170 ~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T-------~ll~------~A~~~ 236 (278)
T PRK00258 170 LGKAELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT-------PFLA------WAKAQ 236 (278)
T ss_pred ccceeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC-------HHHH------HHHHC
Confidence 1234578999999997421 24557899999999999999876 3443 36677
Q ss_pred ceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 339 SAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 339 ~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 237 G~--~~~~G~~-----Ml~~Qa~~~f~~wtg~ 261 (278)
T PRK00258 237 GA--RTIDGLG-----MLVHQAAEAFELWTGV 261 (278)
T ss_pred cC--eecCCHH-----HHHHHHHHHHHHHcCC
Confidence 87 5667777 9999999999999985
No 47
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=99.89 E-value=8.8e-23 Score=198.26 Aligned_cols=209 Identities=20% Similarity=0.333 Sum_probs=169.3
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCcc-Ccchh-
Q 017438 129 RNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGF-HPLNI- 205 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl-~~~N~- 205 (371)
..-+.+++++|+++.|..|. +..++|.+.|+.+. ++++.|.+|++|+|+ ...++++.+++ ++-+..+ |.++.
T Consensus 23 ~~Hn~~~~~lGl~~~Y~a~~--v~~~~l~~~v~~~~-~~g~~G~NVTiP~Ke--~~~~~lD~l~~~A~~iGAVNTl~~~~ 97 (283)
T COG0169 23 RMHNAAFRALGLDYVYLAFE--VPPEDLPEAVSGIR-ALGFRGLNVTIPFKE--AALPLLDELSPRARLIGAVNTLVRED 97 (283)
T ss_pred HHHHHHHHHcCCCceEEEee--cCHHHHHHHHHHHH-hcCCCeeEECCccHH--HHHHHHhcCCHHHHHhCCceEEEEcc
Confidence 35678999999999999996 67899999999999 579999999999997 56788899998 7777777 44454
Q ss_pred -hhhccCCCccccccCCHHHHHHHHHHhC--CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCC---HH--
Q 017438 206 -GRLAMRGREPLFIPCTPKGCIELLHRYG--FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKN---PE-- 276 (371)
Q Consensus 206 -G~l~~g~~~~~~~PcTa~gvi~lL~~~~--i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~---l~-- 276 (371)
|++. |+|+|+ .|+.+.|++++ .+.+|++|+|+|+||+ +|+++..|++.|+ +|+|+||+... |.
T Consensus 98 ~g~l~-G~NTD~------~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~ 169 (283)
T COG0169 98 DGKLR-GYNTDG------IGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVNRTRERAEELADL 169 (283)
T ss_pred CCEEE-EEcCCH------HHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 5665 777776 99999999987 5777999999999998 9999999999995 79999997421 11
Q ss_pred ----------------hhccCCcEEEEccCC---CC----cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhh
Q 017438 277 ----------------EITRQADIIISAVGQ---PN----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEE 333 (371)
Q Consensus 277 ----------------~~l~~ADIVIsAvG~---p~----~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~ 333 (371)
+...++|+||++|+. ++ +++.+.++++.+|+|+.|+|.+| +|+-
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-------plL~------ 236 (283)
T COG0169 170 FGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLET-------PLLR------ 236 (283)
T ss_pred hhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCC-------HHHH------
Confidence 111159999999872 22 35567899999999999999988 4554
Q ss_pred hhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 334 ACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 334 v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.++..|+. +-.|.| ||++|.+++|+.|+|+
T Consensus 237 ~A~~~G~~--~idGl~-----Mlv~Qaa~aF~lwtg~ 266 (283)
T COG0169 237 EARAQGAK--TIDGLG-----MLVHQAAEAFELWTGV 266 (283)
T ss_pred HHHHcCCe--EECcHH-----HHHHHHHHHHHHHhCC
Confidence 35566765 445677 9999999999999986
No 48
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=99.89 E-value=2.7e-22 Score=194.31 Aligned_cols=224 Identities=16% Similarity=0.214 Sum_probs=170.1
Q ss_pred EEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc
Q 017438 114 AVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM 193 (371)
Q Consensus 114 aiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p 193 (371)
-.-.+|+.-+.-.-=..-+.+++++|+++.|+.|+. .+.++|.+.++.+.. ++.|++|++|+|. ...++++.++|
T Consensus 7 ~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~-~~~~~l~~~~~~~~~--~~~G~nVT~P~K~--~~~~~~d~~~~ 81 (282)
T TIGR01809 7 KAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFET-CSAEELKEVLSGFGP--QFGGASVTIPLKF--AILRFADEHTD 81 (282)
T ss_pred EEEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeec-CCHHHHHHHHHhcCC--CCcEEEECCCCHH--HHHHHhhcCCH
Confidence 345667533322233456778999999999999962 245789999998843 7999999999997 56778888888
Q ss_pred -ccccCccCcc-h--hhhhccCCCccccccCCHHHHHHHHHHhCC--CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEE
Q 017438 194 -EKDVDGFHPL-N--IGRLAMRGREPLFIPCTPKGCIELLHRYGF--DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVS 266 (371)
Q Consensus 194 -~KDVDgl~~~-N--~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i--~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVt 266 (371)
.|-+..++.+ + -|++. |+|+|+ .|+++.|++.+. +++||+|+|||+|++ ||+++..|...|+ +|+
T Consensus 82 ~A~~iGAVNTv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i~ 153 (282)
T TIGR01809 82 RASLIGSVNTLLRTQNGIWK-GDNTDW------DGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDIT 153 (282)
T ss_pred HHHHhCceeEEEEcCCCcEE-EecCCH------HHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeEE
Confidence 8887777433 3 25554 666666 999999998874 689999999999997 9999999999996 799
Q ss_pred EEeCCCC----------------------CHHhhccCCcEEEEccCCCCcccCCC------------cCCCeEEEEeeec
Q 017438 267 IVHSRTK----------------------NPEEITRQADIIISAVGQPNMVRGSW------------IKPGAVIIDVGIN 312 (371)
Q Consensus 267 v~h~~t~----------------------~l~~~l~~ADIVIsAvG~p~~v~~d~------------ik~gavVIDvgin 312 (371)
|++|+.. ++.+.+.++|+||++|+....++.+. ++++.+|+|+.|+
T Consensus 154 I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~ 233 (282)
T TIGR01809 154 VINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYD 233 (282)
T ss_pred EEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeC
Confidence 9998631 11234577899999998643333322 3467899999999
Q ss_pred CCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 313 PVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 313 ~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
|.+| .|.. .++.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 234 P~~T-------~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 271 (282)
T TIGR01809 234 PWPT-------PLVA------IVSAAGW--RVISGLQ-----MLLHQGFAQFEQWTGM 271 (282)
T ss_pred CCCC-------HHHH------HHHHCCC--EEECcHH-----HHHHHHHHHHHHHHCC
Confidence 9887 4554 3566787 4556777 9999999999999985
No 49
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=99.88 E-value=2e-22 Score=195.76 Aligned_cols=211 Identities=14% Similarity=0.145 Sum_probs=168.5
Q ss_pred HHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc-
Q 017438 129 RNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL- 203 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~- 203 (371)
..-+.+++++|+++.|..|+-. +++++|.+.++.+... ++.|++|++|+|. ...++++.++| .+.+..++.+
T Consensus 21 ~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~lD~l~~~A~~iGAVNTv~ 97 (283)
T PRK14027 21 AMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYKQ--AVLPLLDEVSEQATQLGAVNTVV 97 (283)
T ss_pred HHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCHH--HHHHHhhhCCHHHHHhCCceEEE
Confidence 4567889999999999999622 3468899999998764 8999999999987 66788899999 8888887543
Q ss_pred h--hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCCC---H--
Q 017438 204 N--IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTKN---P-- 275 (371)
Q Consensus 204 N--~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~~---l-- 275 (371)
+ -|++. |+|+|+ .|+++.|++.+.+++||+|+|+|+|++ ||+++..|...|+ +|+|++|+... |
T Consensus 98 ~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~nR~~~ka~~La~ 169 (283)
T PRK14027 98 IDATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVADLDTSRAQALAD 169 (283)
T ss_pred ECCCCcEE-EEcCCH------HHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence 3 35554 776776 999999998767889999999999997 9999999999996 79999986311 1
Q ss_pred -------------------HhhccCCcEEEEccCC---CC---cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccc
Q 017438 276 -------------------EEITRQADIIISAVGQ---PN---MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVC 330 (371)
Q Consensus 276 -------------------~~~l~~ADIVIsAvG~---p~---~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd 330 (371)
.+.+.++|+||++|+. ++ .++.++++++.+|+|+.|+|.+| +|+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-------~ll~--- 239 (283)
T PRK14027 170 VINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIET-------ELLK--- 239 (283)
T ss_pred HHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCCC-------HHHH---
Confidence 1234568999988862 21 25566788999999999999887 4655
Q ss_pred hhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 331 YEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 331 ~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
.++..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 240 ---~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~G~ 269 (283)
T PRK14027 240 ---AARALGC--ETLDGTR-----MAIHQAVDAFRLFTGL 269 (283)
T ss_pred ---HHHHCCC--EEEccHH-----HHHHHHHHHHHHHhCC
Confidence 3666787 4567777 9999999999999985
No 50
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.87 E-value=5.9e-22 Score=190.02 Aligned_cols=209 Identities=20% Similarity=0.231 Sum_probs=165.2
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-ccccCccCcc-h-h
Q 017438 129 RNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EKDVDGFHPL-N-I 205 (371)
Q Consensus 129 ~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~KDVDgl~~~-N-~ 205 (371)
..-+.+++++|+++.|..|+ +.+++|.+.++.++.. ++.|++|++|++. +..++++.+++ .+-+.+++.+ + -
T Consensus 17 ~~hn~~~~~~g~~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A~~~gavNti~~~~ 91 (270)
T TIGR00507 17 LIHNAFFKQLGLEGPYIAFL--VPPDDLEDALSGFFAL-GFKGANVTSPFKE--EAFQFLDEIDERAKLAGAVNTLKLED 91 (270)
T ss_pred HHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhhhCCHHHHHhCCceEEEeeC
Confidence 35678899999999999996 7788899999999874 8999999999987 55788888988 7877776433 3 3
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH---------
Q 017438 206 GRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE--------- 276 (371)
Q Consensus 206 G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~--------- 276 (371)
|++. |+|+|+ .|+++.|++.+...++|+++|+|+|++ |++++..|...|+.|++++|+....+
T Consensus 92 g~l~-g~NTD~------~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~ 163 (270)
T TIGR00507 92 GKLV-GYNTDG------IGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSKAEELAERFQRY 163 (270)
T ss_pred CEEE-EEcCCH------HHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc
Confidence 4443 555554 999999998777788999999999986 99999999999999999988632211
Q ss_pred ---------h-hccCCcEEEEccCC---CC----cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcc
Q 017438 277 ---------E-ITRQADIIISAVGQ---PN----MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVAS 339 (371)
Q Consensus 277 ---------~-~l~~ADIVIsAvG~---p~----~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~ 339 (371)
+ ...++|+||++++. +. .+..++++++.+|+|+.|+|.++ .|. ..++.+|
T Consensus 164 ~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-------~ll------~~A~~~G 230 (270)
T TIGR00507 164 GEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-------PFL------AEAKSLG 230 (270)
T ss_pred CceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-------HHH------HHHHHCC
Confidence 1 22578999999985 22 23456789999999999998766 333 3356677
Q ss_pred eeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 340 AITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 340 ~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+ ++-.|.+ ||++|.+.+++.|+|.
T Consensus 231 ~--~~vdG~~-----Ml~~Qa~~~f~~w~g~ 254 (270)
T TIGR00507 231 T--KTIDGLG-----MLVAQAALAFELWTGV 254 (270)
T ss_pred C--eeeCCHH-----HHHHHHHHHHHHHcCC
Confidence 6 4566777 9999999999999985
No 51
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.83 E-value=8.5e-20 Score=190.92 Aligned_cols=221 Identities=21% Similarity=0.306 Sum_probs=169.6
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 193 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 193 (371)
.-++|+.-+--.-=..-+.+++++|+++.|..|+ + +++.+.++.++. +++.|++|++|++. ...++++.++|
T Consensus 255 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v--~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~lD~~~~~ 327 (529)
T PLN02520 255 YGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLL--V--DDLAKFLQTYSS-PDFAGFSCTIPHKE--DALKCCDEVDPI 327 (529)
T ss_pred EEEEcCCcccccCHHHHHHHHHHCCCCcEEEEee--h--hhHHHHHHHHhh-CCCCEEEECcCCHH--HHHHHhccCCHH
Confidence 3467864333333356788999999999999996 3 467788887766 58999999999987 55778888888
Q ss_pred ccccCccCcc-h---hhhhccCCCccccccCCHHHHHHHHHHh----------CCCCCCCEEEEEcCCcccHHHHHHHhc
Q 017438 194 EKDVDGFHPL-N---IGRLAMRGREPLFIPCTPKGCIELLHRY----------GFDIKGKRAVVIGRSNIVGMPAALLLQ 259 (371)
Q Consensus 194 ~KDVDgl~~~-N---~G~l~~g~~~~~~~PcTa~gvi~lL~~~----------~i~l~GK~vvVIG~s~~VGkpla~lL~ 259 (371)
.+.+.+++.+ + -|++. |+|+|+ .|+++.|++. +.+++||+|+|+|+|++ |++++..|.
T Consensus 328 A~~iGAVNTvv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~ 399 (529)
T PLN02520 328 AKSIGAINTIIRRPSDGKLV-GYNTDY------IGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAK 399 (529)
T ss_pred HHHhCCceEEEEeCCCCEEE-EEcccH------HHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHH
Confidence 8888887443 3 35554 666666 9999999852 56789999999999996 999999999
Q ss_pred cCCCeEEEEeCCCCCHH-----------------hh-ccCCcEEEEccC---CCC----cccCCCcCCCeEEEEeeecCC
Q 017438 260 REDATVSIVHSRTKNPE-----------------EI-TRQADIIISAVG---QPN----MVRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 260 ~~gAtVtv~h~~t~~l~-----------------~~-l~~ADIVIsAvG---~p~----~v~~d~ik~gavVIDvgin~~ 314 (371)
++|++|++++|+.+..+ +. ...+||||++++ .|+ .++.++++++.+|+|+.|+|.
T Consensus 400 ~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~ 479 (529)
T PLN02520 400 EKGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPK 479 (529)
T ss_pred HCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCC
Confidence 99999999988632111 11 135789997775 232 256678999999999999998
Q ss_pred CCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcC
Q 017438 315 EDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNF 370 (371)
Q Consensus 315 ~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~ 370 (371)
+| .|+. .++.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 480 ~T-------~ll~------~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 515 (529)
T PLN02520 480 IT-------RLLR------EAEESGA--IIVSGTE-----MFIRQAYEQFERFTGL 515 (529)
T ss_pred cC-------HHHH------HHHHCCC--eEeCcHH-----HHHHHHHHHHHHHhCC
Confidence 87 4554 3566787 4566776 9999999999999985
No 52
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.81 E-value=8.1e-20 Score=188.90 Aligned_cols=221 Identities=18% Similarity=0.231 Sum_probs=170.0
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-
Q 017438 115 VILVGDRKDSATYVRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM- 193 (371)
Q Consensus 115 iI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p- 193 (371)
.-.+|+.-+--.-=..-+.+++++|+++.|..|+ +.++++.+.++.+.. +++.|++|++|++. ....+++.++|
T Consensus 218 ~~liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~~d~~~~~ 292 (477)
T PRK09310 218 YGLIGDPVDRSISHLSHNPLFSQLSLNCPYIKLP--LTPQELPKFFSTIRD-LPFLGLSVTMPLKT--AVLDFLDKLDPS 292 (477)
T ss_pred EEEECCCcccccCHHHHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHHh-CCCCEEEECccCHH--HHHHHhccCCHH
Confidence 3467764333333346788999999999999996 777889888888876 47999999999987 55778888888
Q ss_pred ccccCccCcc-h-hhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 194 EKDVDGFHPL-N-IGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 194 ~KDVDgl~~~-N-~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+-+.+++.+ + -|++. |+|+|+ .|+++.|++.+.+++||+++|+|+|++ |++++..|.+.|++|++++++
T Consensus 293 A~~iGAVNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~ 364 (477)
T PRK09310 293 VKLCGSCNTLVFRNGKIE-GYNTDG------EGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRT 364 (477)
T ss_pred HHHhCcceEEEeeCCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCC
Confidence 8888777443 3 35554 666666 999999999999999999999999986 999999999999999999886
Q ss_pred CCCHH--------------h--hccCCcEEEEccCCCCcccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhh
Q 017438 272 TKNPE--------------E--ITRQADIIISAVGQPNMVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEAC 335 (371)
Q Consensus 272 t~~l~--------------~--~l~~ADIVIsAvG~p~~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~ 335 (371)
....+ + .+.++|+||++++..-.+. +.+. .+|+|+.|+|.++ .|. ..+
T Consensus 365 ~~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~~~~-~~l~--~~v~D~~Y~P~~T-------~ll------~~A 428 (477)
T PRK09310 365 KAHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSVTIP-KAFP--PCVVDINTLPKHS-------PYT------QYA 428 (477)
T ss_pred HHHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCCcch-hHHh--hhEEeccCCCCCC-------HHH------HHH
Confidence 32211 1 1467899999997533333 2333 3899999999876 343 335
Q ss_pred hhcceeccCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 017438 336 EVASAITPVPGGVGPMTIAMLLSNTLTSAKRVHNFQ 371 (371)
Q Consensus 336 ~~a~~iTPVPGGVGp~T~amLl~n~v~a~~~~~~~~ 371 (371)
+..|+ ++-+|.+ ||++|.+++++.|+|.+
T Consensus 429 ~~~G~--~~~~G~~-----Ml~~Qa~~~f~lw~g~~ 457 (477)
T PRK09310 429 RSQGS--SIIYGYE-----MFAEQALLQFRLWFPTL 457 (477)
T ss_pred HHCcC--EEECcHH-----HHHHHHHHHHHHHcCCc
Confidence 66777 4556777 99999999999999863
No 53
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.59 E-value=5.9e-15 Score=144.19 Aligned_cols=131 Identities=26% Similarity=0.364 Sum_probs=106.1
Q ss_pred CCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------CHHhhccCC
Q 017438 220 CTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQA 282 (371)
Q Consensus 220 cTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~l~~~l~~A 282 (371)
.|+.+ +.+.++++++++.|++|+|||.|.+ |++++..|.+.|++|++++++.. ++.+.++++
T Consensus 133 ~~aegav~~a~~~~~~~l~g~kvlViG~G~i-G~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~a 211 (296)
T PRK08306 133 PTAEGAIMMAIEHTPITIHGSNVLVLGFGRT-GMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKI 211 (296)
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCC
Confidence 34455 6677888899999999999999985 99999999999999999998742 456788999
Q ss_pred cEEEEccCCCCcccCC---CcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHH
Q 017438 283 DIIISAVGQPNMVRGS---WIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 283 DIVIsAvG~p~~v~~d---~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amL 356 (371)
|+||++++. .+++.+ ++++|++|||+++++ |++||+.+.+. +-+.+++||+|+|+|++.+
T Consensus 212 DiVI~t~p~-~~i~~~~l~~~~~g~vIIDla~~p-------------ggtd~~~a~~~Gv~~~~~~~lpg~vap~ta~~~ 277 (296)
T PRK08306 212 DIIFNTIPA-LVLTKEVLSKMPPEALIIDLASKP-------------GGTDFEYAEKRGIKALLAPGLPGKVAPKTAGQI 277 (296)
T ss_pred CEEEECCCh-hhhhHHHHHcCCCCcEEEEEccCC-------------CCcCeeehhhCCeEEEEECCCCccCCHHHHHHH
Confidence 999999864 345555 469999999999875 35677554443 4556899999999999999
Q ss_pred HHHHHHHHH
Q 017438 357 LSNTLTSAK 365 (371)
Q Consensus 357 l~n~v~a~~ 365 (371)
+.|.+..+-
T Consensus 278 ~~~~i~~~l 286 (296)
T PRK08306 278 LANVLSQLL 286 (296)
T ss_pred HHHHHHHHH
Confidence 999987763
No 54
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.48 E-value=1.2e-13 Score=134.52 Aligned_cols=128 Identities=27% Similarity=0.411 Sum_probs=101.8
Q ss_pred CCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------CHHhhccCC
Q 017438 220 CTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQA 282 (371)
Q Consensus 220 cTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~l~~~l~~A 282 (371)
+|+++ +...++.++++++||+++|+|.|++ |+.++..|...|++|++++|+.. ++.+.++++
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a 210 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI 210 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence 55665 5556677889999999999999995 99999999999999999998642 345678999
Q ss_pred cEEEEccCCCCcccC---CCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcc---eecc-CCCCccHHHHHH
Q 017438 283 DIIISAVGQPNMVRG---SWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVAS---AITP-VPGGVGPMTIAM 355 (371)
Q Consensus 283 DIVIsAvG~p~~v~~---d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~---~iTP-VPGGVGp~T~am 355 (371)
|+||++++.+ +++. +.+++++++||++++| |.+||+. +++.| ...| .||.|+|.|++.
T Consensus 211 DiVint~P~~-ii~~~~l~~~k~~aliIDlas~P-------------g~tdf~~-Ak~~G~~a~~~~glPg~~ap~ta~~ 275 (287)
T TIGR02853 211 DIVINTIPAL-VLTADVLSKLPKHAVIIDLASKP-------------GGTDFEY-AKKRGIKALLAPGLPGIVAPKTAGK 275 (287)
T ss_pred CEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCC-------------CCCCHHH-HHHCCCEEEEeCCCCcccCchhHHH
Confidence 9999998653 4444 3578999999999876 4567744 44443 2335 899999999999
Q ss_pred HHHHHHHH
Q 017438 356 LLSNTLTS 363 (371)
Q Consensus 356 Ll~n~v~a 363 (371)
++.|++..
T Consensus 276 i~~~~~~~ 283 (287)
T TIGR02853 276 ILANVLSE 283 (287)
T ss_pred HHHHHHHH
Confidence 99999865
No 55
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.16 E-value=4.5e-10 Score=97.73 Aligned_cols=127 Identities=25% Similarity=0.383 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC-------------------CHHhhccC
Q 017438 222 PKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK-------------------NPEEITRQ 281 (371)
Q Consensus 222 a~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~-------------------~l~~~l~~ 281 (371)
..|+.+.+++.++++++++++|+|.|++ |+.++..|.+.| ..|++++++.. +..+.+.+
T Consensus 3 ~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (155)
T cd01065 3 GLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAE 81 (155)
T ss_pred HHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhcccc
Confidence 4799999999999999999999999875 999999999886 78999977531 23344688
Q ss_pred CcEEEEccCCCCc------ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHH
Q 017438 282 ADIIISAVGQPNM------VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAM 355 (371)
Q Consensus 282 ADIVIsAvG~p~~------v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~am 355 (371)
+|+||++++.... +....+++|.+|+|+++.+..+ .+.+..+..+. .=++| . .|
T Consensus 82 ~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-------------~l~~~~~~~g~-~~v~g-~-----~~ 141 (155)
T cd01065 82 ADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-------------PLLKEARALGA-KTIDG-L-----EM 141 (155)
T ss_pred CCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-------------HHHHHHHHCCC-ceeCC-H-----HH
Confidence 9999999985432 2334468999999999876422 22233444554 22454 4 49
Q ss_pred HHHHHHHHHHHHhc
Q 017438 356 LLSNTLTSAKRVHN 369 (371)
Q Consensus 356 Ll~n~v~a~~~~~~ 369 (371)
|+.|.+++++.|+|
T Consensus 142 ~~~q~~~~~~~~~~ 155 (155)
T cd01065 142 LVYQAAEAFELWTG 155 (155)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999986
No 56
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.15 E-value=2.8e-11 Score=105.19 Aligned_cols=88 Identities=28% Similarity=0.363 Sum_probs=70.1
Q ss_pred HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC--------------------CCHHhhccCCcEEE
Q 017438 228 LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT--------------------KNPEEITRQADIII 286 (371)
Q Consensus 228 lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t--------------------~~l~~~l~~ADIVI 286 (371)
+.++...+++||+++|||+|++ |+.++..|..+|++ |++++|+. .++.+.+.++||||
T Consensus 2 la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI 80 (135)
T PF01488_consen 2 LAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVI 80 (135)
T ss_dssp HHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEE
T ss_pred hhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEE
Confidence 4444555899999999999997 99999999999986 99999972 24456788999999
Q ss_pred EccCCCCc-ccCCCcCCC----eEEEEeeecCCCC
Q 017438 287 SAVGQPNM-VRGSWIKPG----AVIIDVGINPVED 316 (371)
Q Consensus 287 sAvG~p~~-v~~d~ik~g----avVIDvgin~~~~ 316 (371)
++|+.+.. ++.+++++. .+|+|+++++.-+
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~i~ 115 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVPRDID 115 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-SB-
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccCCCCC
Confidence 99998765 788999887 4999999876543
No 57
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=99.09 E-value=2.7e-10 Score=91.57 Aligned_cols=78 Identities=35% Similarity=0.501 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHhC----CCCCCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCCCCHHhhccCCcEEEEccCCCCc
Q 017438 220 CTPKGCIELLHRYG----FDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRTKNPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 220 cTa~gvi~lL~~~~----i~l~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~ 294 (371)
||+.++++.|++.. .++++|+++|+|+|.+ |++++.+|.+. +.+|+++++ |++|+++|.+++
T Consensus 1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~~-g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~ 67 (86)
T cd05191 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGEV-GKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP 67 (86)
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence 78999999888764 4599999999999775 99999999998 578999977 999999999999
Q ss_pred ccC---CCcCCCeEEEEee
Q 017438 295 VRG---SWIKPGAVIIDVG 310 (371)
Q Consensus 295 v~~---d~ik~gavVIDvg 310 (371)
+.+ .+++++.+|+|+.
T Consensus 68 ~~~~~~~~~~~~~~v~~~a 86 (86)
T cd05191 68 VLEEATAKINEGAVVIDLA 86 (86)
T ss_pred chHHHHHhcCCCCEEEecC
Confidence 876 7889999999973
No 58
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=99.02 E-value=3.2e-10 Score=117.42 Aligned_cols=116 Identities=22% Similarity=0.247 Sum_probs=88.5
Q ss_pred HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEccCCCC
Q 017438 227 ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 227 ~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsAvG~p~ 293 (371)
.+++..+..+.||+|+|+|.|. +|+.+|..|...|++|+++++. ..++.+.++.|||||+++|.++
T Consensus 243 ~~~R~~~~~LaGKtVgVIG~G~-IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 243 GIFRATDVMIAGKTVVVCGYGD-VGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKD 321 (476)
T ss_pred HHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCccc
Confidence 3445568899999999999998 5999999999999999999765 2357788999999999999999
Q ss_pred cccCCCc---CCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCC
Q 017438 294 MVRGSWI---KPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG 346 (371)
Q Consensus 294 ~v~~d~i---k~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG 346 (371)
+|+.+++ |+|+++|++|....+..- .+-+..+|+|..++.+....+| .|.
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~d~Ei~i--~aL~~~~~vdv~evep~v~~~~-~~~ 374 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHFDNEIQV--AELEAYPGIEIVEIKPQVDRYT-FPD 374 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCCchHHhH--HHHHhcCCceeecccCCCCeEE-eCC
Confidence 9987766 999999999987422100 0112345777666666655555 453
No 59
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=98.99 E-value=8.4e-10 Score=99.66 Aligned_cols=91 Identities=30% Similarity=0.444 Sum_probs=65.7
Q ss_pred HHHHHHHH-HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEc
Q 017438 223 KGCIELLH-RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 223 ~gvi~lL~-~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsA 288 (371)
+.+++-+. ..+..+.||+++|+|.|. |||.+|..|...||.|+|+... +..+++.++++||+|++
T Consensus 7 ~S~~d~i~r~t~~~l~Gk~vvV~GYG~-vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vta 85 (162)
T PF00670_consen 7 QSLVDGIMRATNLMLAGKRVVVIGYGK-VGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTA 85 (162)
T ss_dssp HHHHHHHHHHH-S--TTSEEEEE--SH-HHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-
T ss_pred hhHHHHHHhcCceeeCCCEEEEeCCCc-ccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEEC
Confidence 34444443 568999999999999999 5999999999999999999765 24678999999999999
Q ss_pred cCCCCcccCCC---cCCCeEEEEeeecCC
Q 017438 289 VGQPNMVRGSW---IKPGAVIIDVGINPV 314 (371)
Q Consensus 289 vG~p~~v~~d~---ik~gavVIDvgin~~ 314 (371)
||..+.++.++ +|+|++|.++|.-..
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcCce
Confidence 99988888765 599999999996543
No 60
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.97 E-value=8.1e-10 Score=112.66 Aligned_cols=157 Identities=20% Similarity=0.321 Sum_probs=116.4
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc
Q 017438 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 216 (371)
Q Consensus 137 ~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~ 216 (371)
..|+++-. +.|.|++..++..-.-..=.|-. . .+-..-...+|.-.|-|-.-|..|.|.+..
T Consensus 100 AsGLDSmV------lGE~QILGQVK~Ay~~a~~~g~~-----g-~~L~~lFqkAi~~gKrvRseT~I~~~~VSi------ 161 (414)
T COG0373 100 ASGLDSLV------LGETQILGQVKDAYAKAQENGTL-----G-KVLNRLFQKAISVGKRVRSETGIGKGAVSI------ 161 (414)
T ss_pred hccchhhh------cCcHHHHHHHHHHHHHHHHcCCc-----h-HHHHHHHHHHHHHHHHhhcccCCCCCccch------
Confidence 45777653 46677777776553321111111 1 112244566787788877767666555432
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC-----------------CCHHhh
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-----------------KNPEEI 278 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t-----------------~~l~~~ 278 (371)
+.+.+++.++...+|++|+|+|||+|.+ |.-+|..|.++| ..|+|+||+- .++.++
T Consensus 162 -----~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~ 235 (414)
T COG0373 162 -----SSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEA 235 (414)
T ss_pred -----HHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHh
Confidence 3789999999999999999999999997 999999999999 5899999972 467789
Q ss_pred ccCCcEEEEccCCCCc-ccCCCcCCC------eEEEEeeecCCCCC
Q 017438 279 TRQADIIISAVGQPNM-VRGSWIKPG------AVIIDVGINPVEDA 317 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~-v~~d~ik~g------avVIDvgin~~~~~ 317 (371)
+.++||||++||.|++ |+.+++... .++||++.+|+-++
T Consensus 236 l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~ 281 (414)
T COG0373 236 LAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEP 281 (414)
T ss_pred hhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCc
Confidence 9999999999999997 687776443 69999999997554
No 61
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.85 E-value=8.4e-09 Score=105.62 Aligned_cols=157 Identities=17% Similarity=0.200 Sum_probs=109.4
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc
Q 017438 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 216 (371)
Q Consensus 137 ~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~ 216 (371)
..|+++-. +.|.|++.++++.-+...=.|.. ..+-..-+..++.-.|.|---|..+.|..
T Consensus 103 asGLdSmV------lGE~QIlgQVK~A~~~A~~~g~~------g~~L~~lf~~A~~~aKrVrteT~I~~~~v-------- 162 (414)
T PRK13940 103 ACGLESMV------LGEPQILGQVKDSYTLSKKNHAI------GKELDRVFQKVFATAKRVRSETRIGHCPV-------- 162 (414)
T ss_pred Hhccchhh------cCcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHHhccCCCCCCc--------
Confidence 45777653 46777777776654321111111 01112344556666777654443333222
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC------------------CCHHh
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT------------------KNPEE 277 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t------------------~~l~~ 277 (371)
.-+.+.+++.++...++.||+|+|||+|++ |+.++..|..+|+ .+++++|+. .++.+
T Consensus 163 ---Sv~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~ 238 (414)
T PRK13940 163 ---SVAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ 238 (414)
T ss_pred ---CHHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH
Confidence 234677899988877899999999999997 9999999999995 799999872 23456
Q ss_pred hccCCcEEEEccCCCCc-ccCCCcCC-CeEEEEeeecCCCCC
Q 017438 278 ITRQADIIISAVGQPNM-VRGSWIKP-GAVIIDVGINPVEDA 317 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~-v~~d~ik~-gavVIDvgin~~~~~ 317 (371)
.+.+||+||+||+.|++ |+.++++. ..++||++.+++-+|
T Consensus 239 ~l~~aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLavPRdidp 280 (414)
T PRK13940 239 LIKKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDP 280 (414)
T ss_pred HhccCCEEEECcCCCCeeECHHHhCCCCeEEEEeCCCCCCCc
Confidence 78999999999999997 68777753 479999999998664
No 62
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.74 E-value=8.9e-08 Score=87.29 Aligned_cols=96 Identities=33% Similarity=0.389 Sum_probs=71.8
Q ss_pred CHHHHHH----HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------
Q 017438 221 TPKGCIE----LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------- 273 (371)
Q Consensus 221 Ta~gvi~----lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------------- 273 (371)
|+.+.++ .|++++.++++++++|+|+.+.+|+.++..|.+.|+.|+++.|+..
T Consensus 7 ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~ 86 (194)
T cd01078 7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS 86 (194)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC
Confidence 4455444 4455678999999999997444699999999999999999877521
Q ss_pred ---CHHhhccCCcEEEEccCCCC--cccCC-CcCCCeEEEEeeecCCCC
Q 017438 274 ---NPEEITRQADIIISAVGQPN--MVRGS-WIKPGAVIIDVGINPVED 316 (371)
Q Consensus 274 ---~l~~~l~~ADIVIsAvG~p~--~v~~d-~ik~gavVIDvgin~~~~ 316 (371)
++.+.++++|+||++++.+. ....+ ..+++.+|+|+.++|..+
T Consensus 87 ~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~~ 135 (194)
T cd01078 87 DDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPVG 135 (194)
T ss_pred CHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCCC
Confidence 12356788999999998766 33333 345689999999998755
No 63
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.74 E-value=3.1e-08 Score=93.56 Aligned_cols=93 Identities=27% Similarity=0.429 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe---EEEEeCC----CC--------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT---VSIVHSR----TK-------------------- 273 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt---Vtv~h~~----t~-------------------- 273 (371)
+-.|++..++..+.++++++++|+|+|++ |+.++.+|...|++ |++++|+ ..
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~ 86 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK 86 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc
Confidence 45789999999999999999999999997 99999999999975 9999987 11
Q ss_pred ---CHHhhccCCcEEEEccCCCCcccCCCcC---CCeEEEEeeecCCCC
Q 017438 274 ---NPEEITRQADIIISAVGQPNMVRGSWIK---PGAVIIDVGINPVED 316 (371)
Q Consensus 274 ---~l~~~l~~ADIVIsAvG~p~~v~~d~ik---~gavVIDvgin~~~~ 316 (371)
++.+.++++|+||++++ ++++++++++ ++.+|+|+. ||.++
T Consensus 87 ~~~~l~~~l~~~dvlIgaT~-~G~~~~~~l~~m~~~~ivf~ls-nP~~e 133 (226)
T cd05311 87 TGGTLKEALKGADVFIGVSR-PGVVKKEMIKKMAKDPIVFALA-NPVPE 133 (226)
T ss_pred ccCCHHHHHhcCCEEEeCCC-CCCCCHHHHHhhCCCCEEEEeC-CCCCc
Confidence 24456677999999999 8888888876 889999987 88654
No 64
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.68 E-value=1.3e-07 Score=94.78 Aligned_cols=95 Identities=21% Similarity=0.303 Sum_probs=76.7
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC-C-CeEEEEeCCCC---------------CHHhhccCCcEE
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE-D-ATVSIVHSRTK---------------NPEEITRQADII 285 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~-g-AtVtv~h~~t~---------------~l~~~l~~ADIV 285 (371)
.++....+..+.+++||+|+|+|++|.+|+.++..|..+ | ..+++++|+.. ++.+.+.++|+|
T Consensus 140 ~~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiV 219 (340)
T PRK14982 140 RQVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIV 219 (340)
T ss_pred HHHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEE
Confidence 345555556778999999999999877899999999754 5 48999988631 233677899999
Q ss_pred EEccCCCCc--ccCCCcCCCeEEEEeeecCCCCC
Q 017438 286 ISAVGQPNM--VRGSWIKPGAVIIDVGINPVEDA 317 (371)
Q Consensus 286 IsAvG~p~~--v~~d~ik~gavVIDvgin~~~~~ 317 (371)
|++++.|+. +++++++++.++||++.+++-++
T Consensus 220 v~~ts~~~~~~I~~~~l~~~~~viDiAvPRDVd~ 253 (340)
T PRK14982 220 VWVASMPKGVEIDPETLKKPCLMIDGGYPKNLDT 253 (340)
T ss_pred EECCcCCcCCcCCHHHhCCCeEEEEecCCCCCCc
Confidence 999998765 78899999999999999987554
No 65
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.67 E-value=8.1e-08 Score=96.03 Aligned_cols=168 Identities=14% Similarity=0.086 Sum_probs=106.6
Q ss_pred HcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccc
Q 017438 137 SVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPL 216 (371)
Q Consensus 137 ~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~ 216 (371)
..|+++-. +.|.|++..+++.-....=+|-. ...-..-+..++.-.|.|---|..+.|.+
T Consensus 97 asGLDSmV------lGE~QIlGQVK~Ay~~A~~~g~~------g~~L~~lf~~A~~~aKrVRteT~I~~~~v-------- 156 (338)
T PRK00676 97 TSGMDSLI------LGETEIQGQVKRAYLKAARERKL------PFALHFLFQKALKEGKVFRSKGGAPYAEV-------- 156 (338)
T ss_pred hcccchhh------cCcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHhhhcCCCCCCc--------
Confidence 46777754 46677777776654321111110 01112344556666777654443332221
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-----CCHH----hhccCCcEEE
Q 017438 217 FIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-----KNPE----EITRQADIII 286 (371)
Q Consensus 217 ~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-----~~l~----~~l~~ADIVI 286 (371)
.-+.+++++++.. -+++||+|+|||+|++ |+.++..|.++|+ .|+++||+. .++. ++..++||||
T Consensus 157 ---Sv~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVI 231 (338)
T PRK00676 157 ---TIESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIF 231 (338)
T ss_pred ---CHHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEE
Confidence 1234567777665 5799999999999997 9999999999995 799999983 2222 4577999999
Q ss_pred Ec---cCCCCc-ccCCCcCCC--eEEEEeeecCCCCC-CCCCCceeecccc
Q 017438 287 SA---VGQPNM-VRGSWIKPG--AVIIDVGINPVEDA-KSPRGYRLVGDVC 330 (371)
Q Consensus 287 sA---vG~p~~-v~~d~ik~g--avVIDvgin~~~~~-~~~~g~kl~GDVd 330 (371)
++ |+.|+. ++.+++++. -++||++.+++-++ ....+..++ |+|
T Consensus 232 s~t~~Tas~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly-~iD 281 (338)
T PRK00676 232 FGSSESAYAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL-DMD 281 (338)
T ss_pred EcCCcCCCCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE-EhH
Confidence 97 677876 566666432 48999999997654 222333443 555
No 66
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.59 E-value=9.6e-08 Score=98.18 Aligned_cols=94 Identities=24% Similarity=0.332 Sum_probs=79.6
Q ss_pred cCCHHHHHHHHHHh-CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcE
Q 017438 219 PCTPKGCIELLHRY-GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADI 284 (371)
Q Consensus 219 PcTa~gvi~lL~~~-~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADI 284 (371)
-+|.++++.-+++. ++.+.||+|+|+|.|.+ |+.++..|...|++|+++++.. .++++.++.+|+
T Consensus 192 ~gt~~s~~~ai~rat~~~l~Gk~VlViG~G~I-G~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDV 270 (425)
T PRK05476 192 YGTGESLLDGIKRATNVLIAGKVVVVAGYGDV-GKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDI 270 (425)
T ss_pred HHHHhhhHHHHHHhccCCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCE
Confidence 35788888877776 88899999999999985 9999999999999999997642 246777889999
Q ss_pred EEEccCCCCcccCC---CcCCCeEEEEeeecC
Q 017438 285 IISAVGQPNMVRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 285 VIsAvG~p~~v~~d---~ik~gavVIDvgin~ 313 (371)
||+++|.++.++.+ .+|+|++++++|...
T Consensus 271 VI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 271 FVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred EEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 99999998888754 469999999999754
No 67
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.46 E-value=5.4e-07 Score=92.21 Aligned_cols=93 Identities=28% Similarity=0.371 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEE
Q 017438 220 CTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADII 285 (371)
Q Consensus 220 cTa~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIV 285 (371)
+|.+.+++.+.+ .++.+.||+|+|+|.|.+ |+.+++.|...|+.|+++.+.. .++++.++++|+|
T Consensus 176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV 254 (406)
T TIGR00936 176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF 254 (406)
T ss_pred ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence 456666665555 478899999999999995 9999999999999999986542 2456778999999
Q ss_pred EEccCCCCcccC---CCcCCCeEEEEeeecC
Q 017438 286 ISAVGQPNMVRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 286 IsAvG~p~~v~~---d~ik~gavVIDvgin~ 313 (371)
|+++|.++.++. ..+|+|++++.+|...
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 999999988876 4579999999999754
No 68
>PLN00203 glutamyl-tRNA reductase
Probab=98.45 E-value=4.1e-07 Score=95.75 Aligned_cols=96 Identities=14% Similarity=0.187 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHhCC--CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------CCHHh
Q 017438 221 TPKGCIELLHRYGF--DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------KNPEE 277 (371)
Q Consensus 221 Ta~gvi~lL~~~~i--~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------~~l~~ 277 (371)
-+.+.+++.++..- ++.+++|+|||+|++ |+.++..|...|+ .|++++++. .++.+
T Consensus 247 v~s~Av~la~~~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~ 325 (519)
T PLN00203 247 VSSAAVELALMKLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA 325 (519)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH
Confidence 34577888887644 499999999999886 9999999999996 799998862 13446
Q ss_pred hccCCcEEEEccCCCCc-ccCCCcCC----------CeEEEEeeecCCCCC
Q 017438 278 ITRQADIIISAVGQPNM-VRGSWIKP----------GAVIIDVGINPVEDA 317 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~-v~~d~ik~----------gavVIDvgin~~~~~ 317 (371)
.+.++|+||++|+.++. ++++|+++ ..++||++.+++-+|
T Consensus 326 al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp 376 (519)
T PLN00203 326 CAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVGA 376 (519)
T ss_pred HHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCcc
Confidence 67899999999998775 78888643 259999999997554
No 69
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.45 E-value=7.5e-07 Score=89.96 Aligned_cols=123 Identities=29% Similarity=0.377 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHHhhccCCcEEEEccC---C
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEEITRQADIIISAVG---Q 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG---~ 291 (371)
+.+++|+|+|+|.+ |+.++..|...|++|++++++. .++.+.++++|+||++++ .
T Consensus 165 l~~~~VlViGaG~v-G~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVV-GTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 57889999999875 9999999999999999998641 134567889999999984 2
Q ss_pred --CCcccCCC---cCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhh---hcceeccCCCCccHHHHHHHHHHHHHH
Q 017438 292 --PNMVRGSW---IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE---VASAITPVPGGVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 292 --p~~v~~d~---ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~---~a~~iTPVPGGVGp~T~amLl~n~v~a 363 (371)
|.+++.++ +++|.+|||+++.+--. -. ..+ .+..|++.+.. ..-.+.-.||-+ |.|...++.|.+..
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d~GG~--~e-~~~-~t~~d~p~~~~~Gv~~~~v~nlP~~~-p~~aS~~~~~~l~~ 318 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAIDQGGC--VE-TSR-PTTHDQPTYAVHDVVHYCVANMPGAV-PKTSTYALTNATMP 318 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecCCCCC--cc-CCc-CCCCCCCEEEECCeEEEEeCCccccc-HHHHHHHHHHHHHH
Confidence 55677765 48899999999876311 00 001 22222211111 122345678888 99999998888755
Q ss_pred H
Q 017438 364 A 364 (371)
Q Consensus 364 ~ 364 (371)
+
T Consensus 319 ~ 319 (370)
T TIGR00518 319 Y 319 (370)
T ss_pred H
Confidence 4
No 70
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.42 E-value=5e-07 Score=92.55 Aligned_cols=94 Identities=21% Similarity=0.374 Sum_probs=73.7
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCCC-----------------CHHhhccCCcE
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRTK-----------------NPEEITRQADI 284 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t~-----------------~l~~~l~~ADI 284 (371)
...+++.+....++.|++|+|||+|.+ |+.++..|...|+ .|++++++.. ++.+.+.++|+
T Consensus 167 ~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDv 245 (423)
T PRK00045 167 SAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADI 245 (423)
T ss_pred HHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCE
Confidence 445566655444789999999999886 9999999999997 7999988631 23356788999
Q ss_pred EEEccCCCCc-ccCCCcCC--------CeEEEEeeecCCCCC
Q 017438 285 IISAVGQPNM-VRGSWIKP--------GAVIIDVGINPVEDA 317 (371)
Q Consensus 285 VIsAvG~p~~-v~~d~ik~--------gavVIDvgin~~~~~ 317 (371)
||++||.|+. ++.+|+++ +.++||++.++.-++
T Consensus 246 VI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 246 VISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred EEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCCCcc
Confidence 9999998875 78888844 479999998776553
No 71
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.40 E-value=4.7e-07 Score=92.68 Aligned_cols=95 Identities=29% Similarity=0.404 Sum_probs=74.8
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCCC-----------------CHHhhccCCc
Q 017438 222 PKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRTK-----------------NPEEITRQAD 283 (371)
Q Consensus 222 a~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t~-----------------~l~~~l~~AD 283 (371)
+.+.+++.++...++.|++|+|+|+|.+ |+.++..|...| ..|++++++.. ++.+.+.++|
T Consensus 164 ~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 164 SSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEAD 242 (417)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCC
Confidence 3455666666655799999999999886 999999999999 68999987631 3445678999
Q ss_pred EEEEccCCCCc-ccCCCcCC-------CeEEEEeeecCCCCC
Q 017438 284 IIISAVGQPNM-VRGSWIKP-------GAVIIDVGINPVEDA 317 (371)
Q Consensus 284 IVIsAvG~p~~-v~~d~ik~-------gavVIDvgin~~~~~ 317 (371)
+||++||.|+. ++.+|+++ ..++||++.++.-++
T Consensus 243 vVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid~ 284 (417)
T TIGR01035 243 IVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDVDP 284 (417)
T ss_pred EEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence 99999998875 78888753 359999998775443
No 72
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=98.30 E-value=1.5e-06 Score=87.24 Aligned_cols=88 Identities=25% Similarity=0.375 Sum_probs=73.2
Q ss_pred HHHHHHHH-HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEc
Q 017438 223 KGCIELLH-RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISA 288 (371)
Q Consensus 223 ~gvi~lL~-~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsA 288 (371)
++.+.-+. ..++-+.||++||.|.|. |||..|+.|...||.|.|..-.. ..+++..+.+||+||+
T Consensus 193 qS~~DgI~RaTn~liaGK~vVV~GYG~-vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~ 271 (420)
T COG0499 193 QSLLDGILRATNVLLAGKNVVVAGYGW-VGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTA 271 (420)
T ss_pred hhHHHHHHhhhceeecCceEEEecccc-cchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEc
Confidence 44444333 478889999999999999 69999999999999999986542 2466888999999999
Q ss_pred cCCCCcccCCCc---CCCeEEEEeee
Q 017438 289 VGQPNMVRGSWI---KPGAVIIDVGI 311 (371)
Q Consensus 289 vG~p~~v~~d~i---k~gavVIDvgi 311 (371)
||.-+.|+.+++ |+|++|.++|.
T Consensus 272 TGnkdVi~~eh~~~MkDgaIl~N~GH 297 (420)
T COG0499 272 TGNKDVIRKEHFEKMKDGAILANAGH 297 (420)
T ss_pred cCCcCccCHHHHHhccCCeEEecccc
Confidence 999999988764 88999999994
No 73
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.29 E-value=1.2e-06 Score=79.39 Aligned_cols=81 Identities=27% Similarity=0.407 Sum_probs=64.9
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccC-CC---C
Q 017438 231 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVG-QP---N 293 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG-~p---~ 293 (371)
..+.++.||+|.|||.|.+ |+.+|.+|...|++|+.++++. .++++.+++||+|+...+ .| +
T Consensus 29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~ 107 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRG 107 (178)
T ss_dssp TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTT
T ss_pred CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccce
Confidence 3467899999999999996 9999999999999999998763 467889999999998887 33 4
Q ss_pred cccCCC---cCCCeEEEEeeec
Q 017438 294 MVRGSW---IKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~---ik~gavVIDvgin 312 (371)
+|+.+. +|+|+++|+++--
T Consensus 108 li~~~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 108 LINAEFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp SBSHHHHHTSTTTEEEEESSSG
T ss_pred eeeeeeeeccccceEEEeccch
Confidence 677654 5999999999843
No 74
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.28 E-value=2e-06 Score=88.31 Aligned_cols=92 Identities=25% Similarity=0.399 Sum_probs=74.5
Q ss_pred CHHHHH-HHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEE
Q 017438 221 TPKGCI-ELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIII 286 (371)
Q Consensus 221 Ta~gvi-~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVI 286 (371)
|-++++ .+++..++.+.|++|+|+|.|.+ |+.++..+...|++|+++.... .++++.++.+|+||
T Consensus 184 ~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI 262 (413)
T cd00401 184 CRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFV 262 (413)
T ss_pred hchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEE
Confidence 444444 45555688899999999999985 9999999999999999986542 24567788999999
Q ss_pred EccCCCCcccC---CCcCCCeEEEEeeecC
Q 017438 287 SAVGQPNMVRG---SWIKPGAVIIDVGINP 313 (371)
Q Consensus 287 sAvG~p~~v~~---d~ik~gavVIDvgin~ 313 (371)
.++|.++.+.. +++++|.+++.+|...
T Consensus 263 ~atG~~~~i~~~~l~~mk~GgilvnvG~~~ 292 (413)
T cd00401 263 TTTGNKDIITGEHFEQMKDGAIVCNIGHFD 292 (413)
T ss_pred ECCCCHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 99999887754 4679999999999653
No 75
>PLN02494 adenosylhomocysteinase
Probab=98.27 E-value=1.7e-06 Score=89.86 Aligned_cols=90 Identities=22% Similarity=0.342 Sum_probs=73.7
Q ss_pred CHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEE
Q 017438 221 TPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIII 286 (371)
Q Consensus 221 Ta~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVI 286 (371)
|-+.+++.+.+ .++.+.||+|+|+|.|.+ |+.+|+.+...|++|+++.+.. .++.+.++++||||
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI 314 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV 314 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence 44555555544 478899999999999985 9999999999999999986543 13567789999999
Q ss_pred EccCCCCcccC---CCcCCCeEEEEeee
Q 017438 287 SAVGQPNMVRG---SWIKPGAVIIDVGI 311 (371)
Q Consensus 287 sAvG~p~~v~~---d~ik~gavVIDvgi 311 (371)
+++|..+++.. +++|+|++++.+|.
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence 99999888744 46799999999997
No 76
>PLN02928 oxidoreductase family protein
Probab=98.22 E-value=2.3e-06 Score=85.83 Aligned_cols=133 Identities=22% Similarity=0.284 Sum_probs=88.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------------CCHHhhccCCcEEEEc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------------~~l~~~l~~ADIVIsA 288 (371)
.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+.+
T Consensus 155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 4799999999999996 9999999999999999987641 2577889999999999
Q ss_pred cCC----CCcccCC---CcCCCeEEEEeeecCCCCCCC-----CCCceeec---ccchhh-------h-hhhcceeccCC
Q 017438 289 VGQ----PNMVRGS---WIKPGAVIIDVGINPVEDAKS-----PRGYRLVG---DVCYEE-------A-CEVASAITPVP 345 (371)
Q Consensus 289 vG~----p~~v~~d---~ik~gavVIDvgin~~~~~~~-----~~g~kl~G---DVd~~~-------v-~~~a~~iTPVP 345 (371)
++. .++|+.+ .+|+|+++|++|--.+-+... ..| ++.| ||-..+ . .--.-.+||=-
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~AL~~AL~~g-~i~gAaLDV~~~EP~~~~~pL~~~~nviiTPHi 312 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYDAVLAALESG-HLGGLAIDVAWSEPFDPDDPILKHPNVIITPHV 312 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcC-CeeEEEEccCCCCCCCCCChhhcCCCEEECCcC
Confidence 873 3467665 459999999998544321000 011 3433 552111 0 11133678877
Q ss_pred CCccHHHHHHHHHHHHHHHHHHh
Q 017438 346 GGVGPMTIAMLLSNTLTSAKRVH 368 (371)
Q Consensus 346 GGVGp~T~amLl~n~v~a~~~~~ 368 (371)
||.-.-+..-+...+++..++|.
T Consensus 313 a~~t~~~~~~~~~~~~~nl~~~~ 335 (347)
T PLN02928 313 AGVTEYSYRSMGKIVGDAALQLH 335 (347)
T ss_pred CCChHHHHHHHHHHHHHHHHHHH
Confidence 77655554445555555555554
No 77
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.21 E-value=3.9e-06 Score=82.67 Aligned_cols=93 Identities=27% Similarity=0.396 Sum_probs=69.7
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC-----------------CCHHhhccCCcE
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT-----------------KNPEEITRQADI 284 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t-----------------~~l~~~l~~ADI 284 (371)
...+++.+...-++.|++|+|||.|.+ |+.++..|...| ..|++++++. .++.+.+.++|+
T Consensus 163 ~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDv 241 (311)
T cd05213 163 SAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADV 241 (311)
T ss_pred HHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCE
Confidence 445666666545589999999999886 999999998877 4799998762 124566788999
Q ss_pred EEEccCCCCc---ccC---CCcCCCeEEEEeeecCCCC
Q 017438 285 IISAVGQPNM---VRG---SWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 285 VIsAvG~p~~---v~~---d~ik~gavVIDvgin~~~~ 316 (371)
||++||.|+. +.. .+-+++.++||++.++.-+
T Consensus 242 Vi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 242 VISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred EEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCCCc
Confidence 9999998876 221 1223578999999776544
No 78
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.19 E-value=1.6e-06 Score=85.75 Aligned_cols=77 Identities=36% Similarity=0.538 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------------CCCHHhhccCCcEEEEccC----
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------------TKNPEEITRQADIIISAVG---- 290 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------------------t~~l~~~l~~ADIVIsAvG---- 290 (371)
+...+|+|||.|- ||...|+++...||+|||...+ ..++++.+++||+||.|+=
T Consensus 166 V~~~kv~iiGGGv-vgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGGV-VGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCcc-ccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence 4556899999865 6999999999999999999754 1368899999999998873
Q ss_pred -CCCcccCCCc---CCCeEEEEeeecC
Q 017438 291 -QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 291 -~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
.|.+++.+|+ |||+++|||.++.
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDVAiDq 271 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDVAIDQ 271 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEEEEcC
Confidence 4678888865 8999999999985
No 79
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.09 E-value=2.2e-05 Score=82.67 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=70.9
Q ss_pred HHHHHHHHHhCC----------CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------C---
Q 017438 223 KGCIELLHRYGF----------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------N--- 274 (371)
Q Consensus 223 ~gvi~lL~~~~i----------~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~--- 274 (371)
.|+++..++++- .+.+.+|+|+|+|.+ |...+..+...|+.|+++..+.. +
T Consensus 139 ~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e 217 (511)
T TIGR00561 139 RAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE 217 (511)
T ss_pred HHHHHHHHHhhhhcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccc
Confidence 677777776653 245689999999885 99999999999999999865420 0
Q ss_pred -----------------------HHhhccCCcEEEEcc---C--CCCcccCCCc---CCCeEEEEeeecC
Q 017438 275 -----------------------PEEITRQADIIISAV---G--QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 275 -----------------------l~~~l~~ADIVIsAv---G--~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
+.++++++||||+++ | .|.+++.+++ |+|++|||++..+
T Consensus 218 ~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 218 EGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred cccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 345678999999999 5 4667888775 8999999999864
No 80
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=98.05 E-value=1e-05 Score=82.37 Aligned_cols=143 Identities=20% Similarity=0.237 Sum_probs=94.2
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P--- 292 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p--- 292 (371)
+.+.++.+.++.||++.|||.|.+ |+.++..|...|++|..++... .++++.+++||+|+..++- +
T Consensus 104 L~l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~ 182 (381)
T PRK00257 104 LTLAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGE 182 (381)
T ss_pred HHHhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCcc
Confidence 334456678999999999999995 9999999999999999986421 3678889999999988872 2
Q ss_pred ----CcccCC---CcCCCeEEEEeeecCCCCCCC-----CCC--ceeecccchh------hhhhhcceeccCCCCccHHH
Q 017438 293 ----NMVRGS---WIKPGAVIIDVGINPVEDAKS-----PRG--YRLVGDVCYE------EACEVASAITPVPGGVGPMT 352 (371)
Q Consensus 293 ----~~v~~d---~ik~gavVIDvgin~~~~~~~-----~~g--~kl~GDVd~~------~v~~~a~~iTPVPGGVGp~T 352 (371)
++++.+ .+|+|+++|+++--.+-+... ..| ....=||=.. ...+..-.+||=-+|.-.=+
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~aRG~vVde~AL~~aL~~g~i~~a~LDV~e~EP~~~~~L~~~nvi~TPHiAg~s~e~ 262 (381)
T PRK00257 183 HPTRHLLDEAFLASLRPGAWLINASRGAVVDNQALREALLSGEDLDAVLDVWEGEPQIDLELADLCTIATPHIAGYSLDG 262 (381)
T ss_pred ccccccCCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCChhhhhCCEEEcCccccCCHHH
Confidence 467654 569999999999655422000 001 0133455211 12223456788777766554
Q ss_pred HHHHHHHHHHHHHHHhc
Q 017438 353 IAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 353 ~amLl~n~v~a~~~~~~ 369 (371)
..-....+++...+|++
T Consensus 263 ~~r~~~~~~~nl~~~~~ 279 (381)
T PRK00257 263 KARGTAQIYQALCRFFG 279 (381)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44444445555555544
No 81
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=98.02 E-value=1.2e-05 Score=81.87 Aligned_cols=143 Identities=19% Similarity=0.229 Sum_probs=92.1
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------CCCHHhhccCCcEEEEccCC-C---
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------TKNPEEITRQADIIISAVGQ-P--- 292 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------t~~l~~~l~~ADIVIsAvG~-p--- 292 (371)
+.+.++.+.++.||++.|||.|.+ |+.+|..|...|++|..++.. ..++++.+++||||+..++- +
T Consensus 104 L~l~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~ 182 (378)
T PRK15438 104 LMLAERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGP 182 (378)
T ss_pred HHHhccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcc
Confidence 334455688999999999999996 999999999999999998742 13588999999999977761 1
Q ss_pred ----CcccCC---CcCCCeEEEEeeecCCCCCC-------CCCCceeecccchh------hhhhhcceeccCCCCccHHH
Q 017438 293 ----NMVRGS---WIKPGAVIIDVGINPVEDAK-------SPRGYRLVGDVCYE------EACEVASAITPVPGGVGPMT 352 (371)
Q Consensus 293 ----~~v~~d---~ik~gavVIDvgin~~~~~~-------~~~g~kl~GDVd~~------~v~~~a~~iTPVPGGVGp~T 352 (371)
++++.+ .+|+|+++|+++--.+-|.. +.+-....=||=.. ...+....+||=-+|.-.=+
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~AL~~aL~~g~~~ga~LDV~e~EP~~~~~Ll~~~~i~TPHiAg~s~e~ 262 (378)
T PRK15438 183 YKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTPHIAGYTLEG 262 (378)
T ss_pred cccccccCHHHHhcCCCCcEEEECCCchhcCHHHHHHHHHhCCCcEEEEecCCCCCCCchhhhhcCCEECCccCcCcHHH
Confidence 356554 46899999999965542200 00001234455211 11222337888778776544
Q ss_pred HHHHHHHHHHHHHHHhc
Q 017438 353 IAMLLSNTLTSAKRVHN 369 (371)
Q Consensus 353 ~amLl~n~v~a~~~~~~ 369 (371)
.......++++..++++
T Consensus 263 ~~~~~~~~~~~l~~~~~ 279 (378)
T PRK15438 263 KARGTTQVFEAYSKFIG 279 (378)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44333334444444443
No 82
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.99 E-value=1.3e-05 Score=79.91 Aligned_cols=81 Identities=23% Similarity=0.371 Sum_probs=66.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.+|.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+.+++.. +++.
T Consensus 145 g~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~ 223 (333)
T PRK13243 145 GYDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMIN 223 (333)
T ss_pred ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccC
Confidence 35789999999999986 9999999999999999987642 25778899999999999842 3565
Q ss_pred C---CCcCCCeEEEEeeecCC
Q 017438 297 G---SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~ 314 (371)
. +.+|+|+++||++--.+
T Consensus 224 ~~~~~~mk~ga~lIN~aRg~~ 244 (333)
T PRK13243 224 EERLKLMKPTAILVNTARGKV 244 (333)
T ss_pred HHHHhcCCCCeEEEECcCchh
Confidence 4 45799999999996654
No 83
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.97 E-value=1.9e-05 Score=73.31 Aligned_cols=94 Identities=22% Similarity=0.242 Sum_probs=67.1
Q ss_pred cCCHHHHHHHHH----Hh--CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH--------------Hhh
Q 017438 219 PCTPKGCIELLH----RY--GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP--------------EEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~----~~--~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l--------------~~~ 278 (371)
|.|..|+...++ +. +.+++||+++|+|.|+ +|+.++..|.+.|++|++++++...+ .+.
T Consensus 3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l 81 (200)
T cd01075 3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI 81 (200)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence 678888755555 33 7899999999999997 59999999999999999987753221 122
Q ss_pred c-cCCcEEEEccCCCCcccCCCcCC--CeEEEEeeecCC
Q 017438 279 T-RQADIIISAVGQPNMVRGSWIKP--GAVIIDVGINPV 314 (371)
Q Consensus 279 l-~~ADIVIsAvG~p~~v~~d~ik~--gavVIDvgin~~ 314 (371)
. .++||++.++.. +.|+.+.++. .-+|++-+-+|.
T Consensus 82 ~~~~~Dv~vp~A~~-~~I~~~~~~~l~~~~v~~~AN~~~ 119 (200)
T cd01075 82 YSVDADVFAPCALG-GVINDDTIPQLKAKAIAGAANNQL 119 (200)
T ss_pred ccccCCEEEecccc-cccCHHHHHHcCCCEEEECCcCcc
Confidence 2 379999955542 3555554422 457788776655
No 84
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.96 E-value=1.8e-05 Score=78.57 Aligned_cols=75 Identities=17% Similarity=0.354 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc-cCC-CeEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ-RED-ATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~-~~g-AtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
..++++|||+|+. |+..+..|. .++ .+|+|++|+. .++++.+++|||||++|+.+.
T Consensus 128 ~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~ 206 (326)
T TIGR02992 128 DSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSET 206 (326)
T ss_pred CCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCC
Confidence 5789999999997 999988886 466 4799998762 356678899999999999765
Q ss_pred -cccCCCcCCCeEEEEeeec
Q 017438 294 -MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 -~v~~d~ik~gavVIDvgin 312 (371)
+++.+|+++|+.|.++|.+
T Consensus 207 p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 207 PILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred cEecHHHcCCCcEEEeeCCC
Confidence 4789999999999999964
No 85
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.95 E-value=1.4e-05 Score=79.01 Aligned_cols=80 Identities=26% Similarity=0.409 Sum_probs=65.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------CCHHhhccCCcEEEEccCC-C---CcccCC---
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------KNPEEITRQADIIISAVGQ-P---NMVRGS--- 298 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------~~l~~~l~~ADIVIsAvG~-p---~~v~~d--- 298 (371)
.++.||++.|||.|.+ |+.+|.+|...|++|..+++.. .++.+.+++||+|+..++- | ++|+.+
T Consensus 143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~ 221 (314)
T PRK06932 143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA 221 (314)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence 4689999999999996 9999999999999998776432 2578999999999998872 2 467665
Q ss_pred CcCCCeEEEEeeecCC
Q 017438 299 WIKPGAVIIDVGINPV 314 (371)
Q Consensus 299 ~ik~gavVIDvgin~~ 314 (371)
++|+|+++|++|--.+
T Consensus 222 ~mk~ga~lIN~aRG~~ 237 (314)
T PRK06932 222 LMKPTAFLINTGRGPL 237 (314)
T ss_pred hCCCCeEEEECCCccc
Confidence 4699999999986543
No 86
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.95 E-value=1.6e-05 Score=78.44 Aligned_cols=80 Identities=23% Similarity=0.328 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---CcccC---
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P---NMVRG--- 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p---~~v~~--- 297 (371)
.+|.||++.|||.|.+ |+.+|.+|...|++|..++++. .++++.+++||+|+...+. | +++..
T Consensus 118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l 196 (303)
T PRK06436 118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML 196 (303)
T ss_pred CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence 4789999999999996 9999999999999999998642 3678889999999999883 2 35654
Q ss_pred CCcCCCeEEEEeeecCC
Q 017438 298 SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 298 d~ik~gavVIDvgin~~ 314 (371)
+.+|+|+++|+++--..
T Consensus 197 ~~mk~ga~lIN~sRG~~ 213 (303)
T PRK06436 197 SLFRKGLAIINVARADV 213 (303)
T ss_pred hcCCCCeEEEECCCccc
Confidence 35699999999997654
No 87
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.93 E-value=1.7e-05 Score=78.50 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=66.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------CCHHhhccCCcEEEEccCC----CCcccCC---C
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------KNPEEITRQADIIISAVGQ----PNMVRGS---W 299 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------~~l~~~l~~ADIVIsAvG~----p~~v~~d---~ 299 (371)
.++.||++.|||.|.+ |+.+|.+|...|++|...++.. .++++.+++||+|+...+- -++|+.+ .
T Consensus 144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~ 222 (317)
T PRK06487 144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL 222 (317)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence 4689999999999996 9999999999999998776541 2588999999999998883 3467765 4
Q ss_pred cCCCeEEEEeeecCC
Q 017438 300 IKPGAVIIDVGINPV 314 (371)
Q Consensus 300 ik~gavVIDvgin~~ 314 (371)
+|+|+++|++|--.+
T Consensus 223 mk~ga~lIN~aRG~v 237 (317)
T PRK06487 223 MKPGALLINTARGGL 237 (317)
T ss_pred CCCCeEEEECCCccc
Confidence 699999999996543
No 88
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.92 E-value=2.1e-05 Score=77.67 Aligned_cols=80 Identities=30% Similarity=0.372 Sum_probs=66.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------CCHHhhccCCcEEEEccCC-C---CcccCC--
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------KNPEEITRQADIIISAVGQ-P---NMVRGS-- 298 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------~~l~~~l~~ADIVIsAvG~-p---~~v~~d-- 298 (371)
.+|.||++.|||.|.+ |+.+|.+|...|++|..+++.. .++++.+++||+|+..++. | ++|..+
T Consensus 141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~ 219 (311)
T PRK08410 141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL 219 (311)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence 4689999999999996 9999999999999999887642 2578999999999988873 2 467665
Q ss_pred -CcCCCeEEEEeeecCC
Q 017438 299 -WIKPGAVIIDVGINPV 314 (371)
Q Consensus 299 -~ik~gavVIDvgin~~ 314 (371)
.+|||+++|+++--.+
T Consensus 220 ~~Mk~~a~lIN~aRG~v 236 (311)
T PRK08410 220 KLLKDGAILINVGRGGI 236 (311)
T ss_pred HhCCCCeEEEECCCccc
Confidence 5699999999996544
No 89
>PRK07574 formate dehydrogenase; Provisional
Probab=97.89 E-value=2.2e-05 Score=80.04 Aligned_cols=133 Identities=16% Similarity=0.284 Sum_probs=88.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ-P---NMV 295 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~-p---~~v 295 (371)
.++.||+|.|||.|.+ |+.+|..|...|++|..++++. .++++.+++||+|+..++. | +++
T Consensus 188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 4689999999999996 9999999999999999988652 3577889999999999983 2 356
Q ss_pred cCC---CcCCCeEEEEeeecCCCCCCC-----CCCce---eecccchhhh--------hhhcceeccCCCCccHHHHHHH
Q 017438 296 RGS---WIKPGAVIIDVGINPVEDAKS-----PRGYR---LVGDVCYEEA--------CEVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~~~~~~-----~~g~k---l~GDVd~~~v--------~~~a~~iTPVPGGVGp~T~amL 356 (371)
+.+ .+|+|+++||++--.+-+... ..| + ...||=+.+= .--.-.+||=-+|.-.=+..-+
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG-~i~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~T~e~~~~~ 345 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKIVDRDAVVRALESG-HLAGYAGDVWFPQPAPADHPWRTMPRNGMTPHISGTTLSAQARY 345 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhC-CccEEEEecCCCCCCCCCChHHhCCCeEECCccccCcHHHHHHH
Confidence 654 469999999998654321000 001 2 3456633210 0013367887777654444444
Q ss_pred HHHHHHHHHHHh
Q 017438 357 LSNTLTSAKRVH 368 (371)
Q Consensus 357 l~n~v~a~~~~~ 368 (371)
...+++..++|+
T Consensus 346 ~~~~~~ni~~~~ 357 (385)
T PRK07574 346 AAGTREILECFF 357 (385)
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
No 90
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.88 E-value=2.5e-05 Score=77.41 Aligned_cols=80 Identities=13% Similarity=0.199 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC-C---CcccC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMVRG 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~-p---~~v~~ 297 (371)
.+++||++.|||.|.+ |+.+|..|...|+.|+.++++. .++.+.+++||+|+...+. | +++..
T Consensus 132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~ 210 (312)
T PRK15469 132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIINQ 210 (312)
T ss_pred CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhHH
Confidence 4689999999999996 9999999999999999887542 2578889999999999884 2 24554
Q ss_pred C---CcCCCeEEEEeeecCC
Q 017438 298 S---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 298 d---~ik~gavVIDvgin~~ 314 (371)
+ .+|+|+++|++|--.+
T Consensus 211 ~~l~~mk~ga~lIN~aRG~v 230 (312)
T PRK15469 211 QLLEQLPDGAYLLNLARGVH 230 (312)
T ss_pred HHHhcCCCCcEEEECCCccc
Confidence 3 5699999999996543
No 91
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.87 E-value=3.2e-05 Score=77.03 Aligned_cols=81 Identities=22% Similarity=0.313 Sum_probs=64.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHh-ccCCCeEEEEeCCC-----------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLL-QREDATVSIVHSRT-----------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL-~~~gAtVtv~h~~t-----------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.+|.|++|.|||.|.+ |+.+|..| ...|++|+..+++. .++.+.+++||+|+.+++.. +++.
T Consensus 141 ~~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~ 219 (332)
T PRK08605 141 SRSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFN 219 (332)
T ss_pred cceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcC
Confidence 34689999999999986 99999999 56788998887532 37888999999999998742 3454
Q ss_pred C---CCcCCCeEEEEeeecCC
Q 017438 297 G---SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~---d~ik~gavVIDvgin~~ 314 (371)
. +++|+|+++||++--..
T Consensus 220 ~~~l~~mk~gailIN~sRG~~ 240 (332)
T PRK08605 220 ADLFKHFKKGAVFVNCARGSL 240 (332)
T ss_pred HHHHhcCCCCcEEEECCCCcc
Confidence 3 46799999999996543
No 92
>PRK12862 malic enzyme; Reviewed
Probab=97.87 E-value=8.8e-05 Score=81.55 Aligned_cols=172 Identities=15% Similarity=0.232 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcc
Q 017438 125 ATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPL 203 (371)
Q Consensus 125 ~~Yv~~k~k~~~~~G-I~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~ 203 (371)
.--.+.|.-.++.+| |++..+.+... +.+|+++.++.+- |++-||++.= -..-+--++++.+..+-|+.-||.
T Consensus 94 ~pv~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~ED--~~~~~~f~i~~~~~~~~~ip~f~D- 167 (763)
T PRK12862 94 KPVMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLED--IKAPECFYIERELRERMKIPVFHD- 167 (763)
T ss_pred cchHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeeec--ccCchHHHHHHHHHhcCCCceEec-
Confidence 445567888887775 88777777643 7899999999987 7788877641 011123445555544445555552
Q ss_pred hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCC---------
Q 017438 204 NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR--------- 271 (371)
Q Consensus 204 N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~--------- 271 (371)
++.+-.-.+..|++..++-.+.+++..++++.|+|.+ |..++.+|...|. .+++|+++
T Consensus 168 ---------D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~ 237 (763)
T PRK12862 168 ---------DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTE 237 (763)
T ss_pred ---------CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCc
Confidence 2334334566789999999999999999999999997 9999999999997 68898754
Q ss_pred --------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecCC
Q 017438 272 --------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 314 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~~ 314 (371)
..+|.+.++.+|++|...+ |+.+++|||+. .-+|+=+. ||.
T Consensus 238 ~l~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 295 (763)
T PRK12862 238 LMDPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALA-NPT 295 (763)
T ss_pred cccHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCC-CCc
Confidence 1358899999999998887 89999999854 66777666 443
No 93
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=97.86 E-value=8.5e-05 Score=73.54 Aligned_cols=82 Identities=28% Similarity=0.390 Sum_probs=70.1
Q ss_pred HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCCcccC
Q 017438 231 RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPNMVRG 297 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~~v~~ 297 (371)
...+-+.||.+||.|.|. |||.-|..|...|+.|+|..-.. ..+++.++++||+|++||.-+.|..
T Consensus 207 aTDvM~aGKv~Vv~GYGd-VGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~ 285 (434)
T KOG1370|consen 207 ATDVMIAGKVAVVCGYGD-VGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITG 285 (434)
T ss_pred hhhheecccEEEEeccCc-cchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhH
Confidence 356778999999999999 59999999999999999986442 3578999999999999999888877
Q ss_pred CC---cCCCeEEEEeeecC
Q 017438 298 SW---IKPGAVIIDVGINP 313 (371)
Q Consensus 298 d~---ik~gavVIDvgin~ 313 (371)
+. .|.+++|.++|+.-
T Consensus 286 ~H~~~mk~d~IvCN~Ghfd 304 (434)
T KOG1370|consen 286 EHFDQMKNDAIVCNIGHFD 304 (434)
T ss_pred HHHHhCcCCcEEecccccc
Confidence 65 48899999999753
No 94
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=97.86 E-value=5.6e-05 Score=73.70 Aligned_cols=93 Identities=17% Similarity=0.266 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHhhccCCc
Q 017438 224 GCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEITRQAD 283 (371)
Q Consensus 224 gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~~l~~AD 283 (371)
++++-.++.|++++...|.|+|+-+.+|..+++.|..++......+|... ++.....++|
T Consensus 153 ~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~~e~ 232 (351)
T COG5322 153 QVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALPQED 232 (351)
T ss_pred HHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeeccccccccc
Confidence 45666667899999999999999999999999999999988888875420 1222334445
Q ss_pred EEE-EccCCCC-cccCCCcCCCeEEEEeeecCCCC
Q 017438 284 III-SAVGQPN-MVRGSWIKPGAVIIDVGINPVED 316 (371)
Q Consensus 284 IVI-sAvG~p~-~v~~d~ik~gavVIDvgin~~~~ 316 (371)
++| +|+-.++ .|.+.++|||++|+|-|++.+-+
T Consensus 233 i~v~vAs~~~g~~I~pq~lkpg~~ivD~g~P~dvd 267 (351)
T COG5322 233 ILVWVASMPKGVEIFPQHLKPGCLIVDGGYPKDVD 267 (351)
T ss_pred eEEEEeecCCCceechhhccCCeEEEcCCcCcccc
Confidence 544 7776666 48999999999999999987644
No 95
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.83 E-value=2.6e-05 Score=77.81 Aligned_cols=80 Identities=23% Similarity=0.335 Sum_probs=65.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCCC----CcccC--
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQP----NMVRG-- 297 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~p----~~v~~-- 297 (371)
.++.|+++.|||.|.+ |+++|..|...|++|+.++++. .++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~ 220 (330)
T PRK12480 142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM 220 (330)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence 4689999999999986 9999999999999999988642 36788999999999999853 24443
Q ss_pred -CCcCCCeEEEEeeecCC
Q 017438 298 -SWIKPGAVIIDVGINPV 314 (371)
Q Consensus 298 -d~ik~gavVIDvgin~~ 314 (371)
..+|+|+++|+++--.+
T Consensus 221 l~~mk~gavlIN~aRG~~ 238 (330)
T PRK12480 221 FDHVKKGAILVNAARGAV 238 (330)
T ss_pred HhcCCCCcEEEEcCCccc
Confidence 34689999999985543
No 96
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.83 E-value=0.00012 Score=80.34 Aligned_cols=173 Identities=17% Similarity=0.255 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCc
Q 017438 124 SATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHP 202 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~G-I~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~ 202 (371)
+.--.+.|.-.++.+| |++..+.+... +.+|+++.++.+- |.+-||++.== ..-+--++++.+..+-|+.-||.
T Consensus 85 ~~pv~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED~--~~p~~f~i~~~~~~~~~ip~f~D 159 (752)
T PRK07232 85 SKPVMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLEDI--KAPECFYIEEKLRERMDIPVFHD 159 (752)
T ss_pred CccHHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeeec--CCchHHHHHHHHHHhcCCCeecc
Confidence 3444567888888775 88877777643 7889999998886 77888886411 11123345555544445555552
Q ss_pred chhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCC--------
Q 017438 203 LNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR-------- 271 (371)
Q Consensus 203 ~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~-------- 271 (371)
++.+-.-.+..|++..|+-.+.+++..++++.|+|.+ |-.++.+|...|. .+++|+++
T Consensus 160 ----------D~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~ 228 (752)
T PRK07232 160 ----------DQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRT 228 (752)
T ss_pred ----------ccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCc
Confidence 2333334455789999999999999999999999987 9999999999987 68888754
Q ss_pred ---------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecCC
Q 017438 272 ---------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 314 (371)
Q Consensus 272 ---------------t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~~ 314 (371)
..+|.+.++.+|++|...+ |+.+++||++. ..+|+=+. ||.
T Consensus 229 ~~~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 287 (752)
T PRK07232 229 EGMDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALA-NPD 287 (752)
T ss_pred ccccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecC-CCC
Confidence 1368899999999998777 89999999854 66777666 443
No 97
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.79 E-value=4e-05 Score=76.26 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=65.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhc-cCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCC-C---Ccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSRT------------KNPEEITRQADIIISAVGQ-P---NMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~-~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~-p---~~v 295 (371)
+.+|.||++.|||.|.+ |+.+|..|. ..|++|...++.. .++.+.+++||+|+..++. | ++|
T Consensus 140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 45799999999999996 999999997 8899988776542 2578899999999988873 3 467
Q ss_pred cCC---CcCCCeEEEEeeecCC
Q 017438 296 RGS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~ 314 (371)
..+ .+|||+++|+++--.+
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~v 240 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPV 240 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccc
Confidence 665 4699999999985543
No 98
>PLN02306 hydroxypyruvate reductase
Probab=97.79 E-value=4e-05 Score=78.11 Aligned_cols=80 Identities=24% Similarity=0.295 Sum_probs=64.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhc-cCCCeEEEEeCC----------------------------CCCHHhhccCCc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQ-REDATVSIVHSR----------------------------TKNPEEITRQAD 283 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~-~~gAtVtv~h~~----------------------------t~~l~~~l~~AD 283 (371)
+.++.||++.|||.|.+ |+.+|.+|. ..|++|..++++ ..++++.+++||
T Consensus 160 g~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sD 238 (386)
T PLN02306 160 GNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREAD 238 (386)
T ss_pred CcCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCC
Confidence 34689999999999996 999999985 889999877542 136888999999
Q ss_pred EEEEccCC----CCcccCC---CcCCCeEEEEeeecC
Q 017438 284 IIISAVGQ----PNMVRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 284 IVIsAvG~----p~~v~~d---~ik~gavVIDvgin~ 313 (371)
||+..++- .++|+.+ ++|+|+++|+++--.
T Consensus 239 iV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~ 275 (386)
T PLN02306 239 VISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGP 275 (386)
T ss_pred EEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 99988772 3467665 569999999999543
No 99
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.79 E-value=3.6e-05 Score=71.62 Aligned_cols=113 Identities=19% Similarity=0.316 Sum_probs=73.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCH-----------------HhhccCCcEEEEccCCCCc-
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNP-----------------EEITRQADIIISAVGQPNM- 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l-----------------~~~l~~ADIVIsAvG~p~~- 294 (371)
++++||+|+|||.|.+ |.-.+..|++.|+.|+++.... +.+ ++.+..+|+||+||+.+.+
T Consensus 6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHH
Confidence 5789999999999885 9999999999999999996542 111 2357889999999998764
Q ss_pred --ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHHH
Q 017438 295 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTLT 362 (371)
Q Consensus 295 --v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~n~v~ 362 (371)
|..+. +.+. .+++.-++. .+|+-|.++.+. .-+|+ -||-.|..+..|=+++-+
T Consensus 85 ~~i~~~a-~~~~-lvn~~d~~~-----------~~~f~~Pa~~~~g~l~iaIs--T~G~sP~la~~lr~~ie~ 142 (202)
T PRK06718 85 EQVKEDL-PENA-LFNVITDAE-----------SGNVVFPSALHRGKLTISVS--TDGASPKLAKKIRDELEA 142 (202)
T ss_pred HHHHHHH-HhCC-cEEECCCCc-----------cCeEEEeeEEEcCCeEEEEE--CCCCChHHHHHHHHHHHH
Confidence 43332 4454 334432221 134433332222 23343 478899888776555443
No 100
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.78 E-value=4.5e-05 Score=76.10 Aligned_cols=81 Identities=25% Similarity=0.374 Sum_probs=67.7
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCC-C---Cc
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQ-P---NM 294 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~-p---~~ 294 (371)
.+.+|.||++-|||.|.+ |+.++..|...|++|..+++.. .+|.+.+++||||+.-++. | ++
T Consensus 136 ~g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~ 214 (324)
T COG0111 136 RGTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGL 214 (324)
T ss_pred ccccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcc
Confidence 356889999999999996 9999999999999999998732 3588999999999998883 2 46
Q ss_pred ccCC---CcCCCeEEEEeeecC
Q 017438 295 VRGS---WIKPGAVIIDVGINP 313 (371)
Q Consensus 295 v~~d---~ik~gavVIDvgin~ 313 (371)
|+.+ .+|+|+++|+++--.
T Consensus 215 i~~~~~a~MK~gailIN~aRG~ 236 (324)
T COG0111 215 INAEELAKMKPGAILINAARGG 236 (324)
T ss_pred cCHHHHhhCCCCeEEEECCCcc
Confidence 7665 469999999998544
No 101
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.77 E-value=8.2e-05 Score=73.90 Aligned_cols=87 Identities=21% Similarity=0.354 Sum_probs=67.1
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCC---------------------CCCHHhhc
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSR---------------------TKNPEEIT 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~---------------------t~~l~~~l 279 (371)
.|++....-. .-..++++|||+|+. |+..+..|.. ++ .+|++++|+ ..++++.+
T Consensus 119 ~~~~a~~~la--~~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al 195 (330)
T PRK08291 119 AGAVAARHLA--REDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAV 195 (330)
T ss_pred HHHHHHHHhC--CCCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHH
Confidence 5666655322 335689999999997 9987777763 55 579999876 13566788
Q ss_pred cCCcEEEEccCCCC-cccCCCcCCCeEEEEeeec
Q 017438 280 RQADIIISAVGQPN-MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 280 ~~ADIVIsAvG~p~-~v~~d~ik~gavVIDvgin 312 (371)
++|||||++|+... +++.+|+++|+.|+.+|.+
T Consensus 196 ~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 196 AGADIIVTTTPSEEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred ccCCEEEEeeCCCCcEecHHHcCCCceEEeeCCC
Confidence 99999999999655 5789999999999999865
No 102
>PLN03139 formate dehydrogenase; Provisional
Probab=97.73 E-value=5.3e-05 Score=77.28 Aligned_cols=133 Identities=17% Similarity=0.258 Sum_probs=87.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCC----Ccc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQP----NMV 295 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p----~~v 295 (371)
.+|.||+|.|||.|.+ |+.+|..|...|+.|..++++. .++++.++++|+|+..++.. ++|
T Consensus 195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4799999999999996 9999999999999999887541 36888999999999988742 256
Q ss_pred cCC---CcCCCeEEEEeeecCCCCCCC-----CCCce---eecccchhhhh-------h-hcceeccCCCCccHHHHHHH
Q 017438 296 RGS---WIKPGAVIIDVGINPVEDAKS-----PRGYR---LVGDVCYEEAC-------E-VASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~~~~~~-----~~g~k---l~GDVd~~~v~-------~-~a~~iTPVPGGVGp~T~amL 356 (371)
+.+ .+|+|+++||++--.+-|... ..| + ...||=+.+=. . -.-.+||=-+|.-.-+..-+
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG-~l~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~t~~~~~r~ 352 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGAIMDTQAVADACSSG-HIGGYGGDVWYPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRY 352 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcC-CceEEEEcCCCCCCCCCCChhhcCCCeEEcccccccCHHHHHHH
Confidence 554 469999999999654321000 001 2 34577432210 0 13367776676554444444
Q ss_pred HHHHHHHHHHHh
Q 017438 357 LSNTLTSAKRVH 368 (371)
Q Consensus 357 l~n~v~a~~~~~ 368 (371)
...+++..++|+
T Consensus 353 ~~~~~~nl~~~~ 364 (386)
T PLN03139 353 AAGVKDMLDRYF 364 (386)
T ss_pred HHHHHHHHHHHH
Confidence 444444444444
No 103
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.70 E-value=2.3e-05 Score=70.39 Aligned_cols=78 Identities=31% Similarity=0.458 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------C------------------------CC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------T------------------------KN 274 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------t------------------------~~ 274 (371)
.+...+|+|+|+|. ||+.++.+|...|++|++.+.. + ..
T Consensus 17 ~~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 35678999999987 5999999999999999998653 1 13
Q ss_pred HHhhccCCcEEEEcc-----CCCCcccCCCc---CCCeEEEEeeecC
Q 017438 275 PEEITRQADIIISAV-----GQPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 275 l~~~l~~ADIVIsAv-----G~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
+.+.++.+|+||++. ..|.+|+.+++ ++|.+|+|+..+.
T Consensus 96 f~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 96 FAEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 557789999999654 25778888775 8899999998764
No 104
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.68 E-value=0.00019 Score=71.16 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc-cCCC-eEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ-REDA-TVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~-~~gA-tVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
..++++|||.|+. |+..+..++ .+++ +|++++++. .++++.++++||||++|+.++
T Consensus 126 ~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~ 204 (325)
T PRK08618 126 DAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT 204 (325)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence 5789999999997 988776654 4564 788887751 346678899999999999777
Q ss_pred c-ccCCCcCCCeEEEEeeec
Q 017438 294 M-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~-v~~d~ik~gavVIDvgin 312 (371)
. +. +|+++|+.|+-+|.+
T Consensus 205 p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 205 PVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred cchH-HhcCCCcEEEecCCC
Confidence 5 78 999999999999975
No 105
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.68 E-value=6.9e-05 Score=76.83 Aligned_cols=78 Identities=27% Similarity=0.495 Sum_probs=65.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------CCHHhhccCCcEEEEccCC-C---CcccCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------KNPEEITRQADIIISAVGQ-P---NMVRGS 298 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------~~l~~~l~~ADIVIsAvG~-p---~~v~~d 298 (371)
+.+|.||++.|||.|.+ |+.+|..|...|++|..++++. .++++.+++||+|+..++. + +++..+
T Consensus 146 ~~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~ 224 (409)
T PRK11790 146 SFEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAE 224 (409)
T ss_pred cccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHH
Confidence 35799999999999996 9999999999999999887542 2688999999999998873 2 367654
Q ss_pred ---CcCCCeEEEEeee
Q 017438 299 ---WIKPGAVIIDVGI 311 (371)
Q Consensus 299 ---~ik~gavVIDvgi 311 (371)
.+|+|+++|+++-
T Consensus 225 ~l~~mk~ga~lIN~aR 240 (409)
T PRK11790 225 ELALMKPGAILINASR 240 (409)
T ss_pred HHhcCCCCeEEEECCC
Confidence 5699999999993
No 106
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.67 E-value=8.3e-05 Score=78.51 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=66.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------CCCHHhhccCCcEEEEccCC----CCcc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITRQADIIISAVGQ----PNMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------t~~l~~~l~~ADIVIsAvG~----p~~v 295 (371)
+.+|.||++.|||.|.+ |+.+|..|...|++|..++++ ..++++.+++||+|+..++. -+++
T Consensus 133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 45799999999999996 999999999999999998763 13688999999999999883 2356
Q ss_pred cCC---CcCCCeEEEEeeecCC
Q 017438 296 RGS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin~~ 314 (371)
..+ .+|+|+++||++--.+
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~ 233 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGI 233 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCce
Confidence 543 4699999999996543
No 107
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.67 E-value=0.00019 Score=70.92 Aligned_cols=77 Identities=30% Similarity=0.380 Sum_probs=59.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC--------------------CCHHhhccCCcEEEEccCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT--------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
....+++.|||.|.. |++.+..+.. ++ .+|++++|+. .++++.+++|||||++|+.+
T Consensus 122 ~~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 122 RKDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred CCCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 357899999999986 9999874443 44 6899998762 24567789999999999976
Q ss_pred Cc-ccCCCcCCCeEEEEeeec
Q 017438 293 NM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 293 ~~-v~~d~ik~gavVIDvgin 312 (371)
.. ++.+|++||++|.=+|.+
T Consensus 201 ~pvl~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 201 EPLVRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred CCEecHHHcCCCCEEEeeCCC
Confidence 65 788999999954445543
No 108
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.60 E-value=0.00012 Score=77.39 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=66.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccCCC----Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVGQP----NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG~p----~~v~ 296 (371)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+..++.. +++.
T Consensus 135 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~ 213 (526)
T PRK13581 135 GVELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIG 213 (526)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcC
Confidence 34689999999999996 9999999999999999987631 15778899999999999843 4665
Q ss_pred CC---CcCCCeEEEEeeecCC
Q 017438 297 GS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin~~ 314 (371)
.+ .+|+|+++||++--.+
T Consensus 214 ~~~l~~mk~ga~lIN~aRG~~ 234 (526)
T PRK13581 214 AEELAKMKPGVRIINCARGGI 234 (526)
T ss_pred HHHHhcCCCCeEEEECCCCce
Confidence 54 5699999999996543
No 109
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.59 E-value=0.00035 Score=68.88 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=62.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC-------------------CCHHhhccCCcEEEEccCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT-------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t-------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
+...+++.|||.|.. |+..+..+.. ++ -+|.+++++. .++++.+++|||||++|+.++
T Consensus 122 ~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~ 200 (304)
T PRK07340 122 PAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRT 200 (304)
T ss_pred CCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCC
Confidence 457899999999996 9999888864 45 4799988751 256778899999999999877
Q ss_pred c-ccCCCcCCCeEEEEeeec
Q 017438 294 M-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~-v~~d~ik~gavVIDvgin 312 (371)
. ++. |+|||+.|.=+|.+
T Consensus 201 Pl~~~-~~~~g~hi~~iGs~ 219 (304)
T PRK07340 201 PVYPE-AARAGRLVVAVGAF 219 (304)
T ss_pred ceeCc-cCCCCCEEEecCCC
Confidence 5 565 89999999999965
No 110
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.58 E-value=9.8e-05 Score=61.33 Aligned_cols=60 Identities=30% Similarity=0.520 Sum_probs=46.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------CCHHhhccCCcEEEEccCCCCc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------~~l~~~l~~ADIVIsAvG~p~~ 294 (371)
++++||+|+|||.|.+ |..-+..|++.||+|+++.... +.+++.+..+|+||.|++.+.+
T Consensus 3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~~ 73 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPEL 73 (103)
T ss_dssp E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HHH
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHHH
Confidence 5789999999999985 9999999999999999997762 3456778899999999987653
No 111
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.56 E-value=8.1e-05 Score=66.36 Aligned_cols=73 Identities=26% Similarity=0.412 Sum_probs=55.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cc-c---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-R--- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v-~--- 296 (371)
++|-+||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||+++..+. .+ .
T Consensus 2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 58999999986 9999999999999999999873 467788999999999998643 22 3
Q ss_pred CCCcCCCeEEEEeeec
Q 017438 297 GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d~ik~gavVIDvgin 312 (371)
...+++|.++||++..
T Consensus 81 ~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 81 LAGLRPGKIIIDMSTI 96 (163)
T ss_dssp GGGS-TTEEEEE-SS-
T ss_pred hhccccceEEEecCCc
Confidence 2456889999999865
No 112
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.54 E-value=0.00033 Score=71.84 Aligned_cols=172 Identities=18% Similarity=0.283 Sum_probs=124.9
Q ss_pred chHHHHHHHHHHHHHc-CCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeC-CCCCCCCHHHHHhhCCcccccCcc
Q 017438 123 DSATYVRNKKKACQSV-GINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQL-PLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~-GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVql-PLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
++.--.+.|.-.++++ ||++.-+.+.. -+.+|+.+.|+.+. |.+-||+++- -.|+ --.+...+..+.||.-|
T Consensus 98 ag~pVmeGKa~Lfk~faGid~~pI~ld~-~~~~ei~~~Vkal~--p~FgginLedi~ap~---cf~ie~~lr~~~~IPvF 171 (432)
T COG0281 98 AGKPVMEGKAVLFKAFAGIDVLPIELDV-GTNNEIIEFVKALE--PTFGGINLEDIDAPR---CFAIEERLRYRMNIPVF 171 (432)
T ss_pred cCcchhhhHHHHHHHhcCCCceeeEeeC-CChHHHHHHHHHhh--hcCCCcceeecccch---hhHHHHHHhhcCCCCcc
Confidence 4445566788888775 69998898875 46678999999997 5799999873 1222 12344455557777777
Q ss_pred CcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC-----
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT----- 272 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t----- 272 (371)
|.-- .+-.--|..|++..|+-.|.+|+..++++.|+|-+ |-.++.+|...|. +|++|+|+-
T Consensus 172 hDDq----------qGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~ 240 (432)
T COG0281 172 HDDQ----------QGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDG 240 (432)
T ss_pred cccc----------cHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCC
Confidence 6332 23222345789999999999999999999999887 9999999999996 699998761
Q ss_pred -CCH-------------------HhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecC
Q 017438 273 -KNP-------------------EEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINP 313 (371)
Q Consensus 273 -~~l-------------------~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~ 313 (371)
.++ .+.+..|||+|...|. +.+++|||+. +.+|+=+. ||
T Consensus 241 r~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfala-NP 302 (432)
T COG0281 241 REDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALA-NP 302 (432)
T ss_pred CcccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecC-CC
Confidence 010 2346789999988887 8889888854 45666555 44
No 113
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.53 E-value=0.0002 Score=75.52 Aligned_cols=90 Identities=27% Similarity=0.446 Sum_probs=67.7
Q ss_pred HHHHHHHHHhCC----------CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------
Q 017438 223 KGCIELLHRYGF----------DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------- 272 (371)
Q Consensus 223 ~gvi~lL~~~~i----------~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------- 272 (371)
.++++..++++. ...|.+|+|+|+|.+ |...+..+...||.|+++..+.
T Consensus 140 ~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e 218 (509)
T PRK09424 140 RAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEE 218 (509)
T ss_pred HHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEecccc
Confidence 678887777653 346999999999885 9999999999999988876541
Q ss_pred -------------CC--------HHhhccCCcEEEEccCCCC-----cccCCC---cCCCeEEEEeeecC
Q 017438 273 -------------KN--------PEEITRQADIIISAVGQPN-----MVRGSW---IKPGAVIIDVGINP 313 (371)
Q Consensus 273 -------------~~--------l~~~l~~ADIVIsAvG~p~-----~v~~d~---ik~gavVIDvgin~ 313 (371)
.+ +.+.++.+|+||.++|.|. +++.++ +|+|.+|+|+|..+
T Consensus 219 ~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~ 288 (509)
T PRK09424 219 EGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAEN 288 (509)
T ss_pred ccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCC
Confidence 01 0122367999999999644 565554 58999999999863
No 114
>PRK12861 malic enzyme; Reviewed
Probab=97.53 E-value=0.00034 Score=76.87 Aligned_cols=172 Identities=15% Similarity=0.205 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcc
Q 017438 125 ATYVRNKKKACQSVG-INSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPL 203 (371)
Q Consensus 125 ~~Yv~~k~k~~~~~G-I~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~ 203 (371)
.--.+.|.-.++++| |++..+.+.. -+.+|+++.++.+.. .+-||++.= -..-+--++++.+..+=|+..||.-
T Consensus 90 ~pvmeGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~~--~fg~i~lED--~~~p~~f~il~~~~~~~~ipvf~DD 164 (764)
T PRK12861 90 KPVMEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLEP--TFGGINLED--IKAPECFTVERKLRERMKIPVFHDD 164 (764)
T ss_pred cchHHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHHh--hcCCceeee--ccCchHHHHHHHHHhcCCCCeeccc
Confidence 344567888888775 8877777764 577899999988874 577755421 1111223344444332255555532
Q ss_pred hhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCC---------
Q 017438 204 NIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSR--------- 271 (371)
Q Consensus 204 N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~--------- 271 (371)
+.+-.-.+..|++..|+-.+.+++..++++.|+|.+ |..++.+|...|. .+++|+++
T Consensus 165 ----------~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~ 233 (764)
T PRK12861 165 ----------QHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGRTT 233 (764)
T ss_pred ----------cchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcc
Confidence 333223455789999999999999999999999997 9999999999997 68999754
Q ss_pred --------------CCCHHhhccCCcEEEEccCCCCcccCCCcCC---CeEEEEeeecCC
Q 017438 272 --------------TKNPEEITRQADIIISAVGQPNMVRGSWIKP---GAVIIDVGINPV 314 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~---gavVIDvgin~~ 314 (371)
..+|.+.++.+|++|...+ |+.+++|||+. .-+|+=+. ||.
T Consensus 234 ~l~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLs-NPt 291 (764)
T PRK12861 234 LMDPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALA-NPT 291 (764)
T ss_pred cCCHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECC-CCC
Confidence 1368899999999997776 89999999854 66777666 554
No 115
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.49 E-value=0.00019 Score=71.70 Aligned_cols=81 Identities=26% Similarity=0.445 Sum_probs=66.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccC-CC---Cccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVG-QP---NMVR 296 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG-~p---~~v~ 296 (371)
+.+++||++-|||.|.+ |+.+|+.|..-|+.|...+++. -++.+.+++||+|+...+ .| |+|.
T Consensus 141 ~~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin 219 (324)
T COG1052 141 GFDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLIN 219 (324)
T ss_pred ccCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcC
Confidence 45899999999999997 9999999998899999888663 137789999999998887 33 4687
Q ss_pred CC---CcCCCeEEEEeeecCC
Q 017438 297 GS---WIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~d---~ik~gavVIDvgin~~ 314 (371)
.+ .+|+|+++|++|--.+
T Consensus 220 ~~~l~~mk~ga~lVNtaRG~~ 240 (324)
T COG1052 220 AEELAKMKPGAILVNTARGGL 240 (324)
T ss_pred HHHHHhCCCCeEEEECCCccc
Confidence 65 4699999999985543
No 116
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=97.43 E-value=7.1e-05 Score=60.13 Aligned_cols=59 Identities=14% Similarity=0.318 Sum_probs=44.9
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc
Q 017438 130 NKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM 193 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p 193 (371)
.-+++++++|++..|..++ ++++++.+.++.+.+ +++.|++|++|++. +...+++.+++
T Consensus 14 ~hn~~f~~~g~~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~~VT~P~K~--~~~~~~D~~~~ 72 (83)
T PF08501_consen 14 IHNAAFEALGLDAVYIPFE--VEPEDLEDFLDALRA-PNFRGLNVTMPHKE--AAIPYLDELSP 72 (83)
T ss_dssp HHHHHHHHTTSSEEEEEEE--TSTTCHHHHHHHHHH-TTESEEEE-TTSTT--HHGGGSSEE-H
T ss_pred HHHHHHHHcCCCcEEEEee--cCHHHHHHHHHHHhc-CCCCeeeecchHHH--HHHHHhccCCH
Confidence 3478899999999999996 667788888888888 78999999999996 33334444444
No 117
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.37 E-value=0.00028 Score=69.44 Aligned_cols=73 Identities=25% Similarity=0.426 Sum_probs=59.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCc-----ccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEITRQADIIISAVGQPNM-----VRGS 298 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~-----v~~d 298 (371)
.+|..||.|.+ |.|+|..|++.|..|++++++. .+..+..++||+||+.++.+.- +.++
T Consensus 1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~ 79 (286)
T COG2084 1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN 79 (286)
T ss_pred CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence 36889999986 9999999999999999999873 2445789999999999986542 2323
Q ss_pred ----CcCCCeEEEEeeec
Q 017438 299 ----WIKPGAVIIDVGIN 312 (371)
Q Consensus 299 ----~ik~gavVIDvgin 312 (371)
..+||.++||+.+.
T Consensus 80 g~~~~~~~G~i~IDmSTi 97 (286)
T COG2084 80 GLLEGLKPGAIVIDMSTI 97 (286)
T ss_pred chhhcCCCCCEEEECCCC
Confidence 35789999999865
No 118
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.33 E-value=0.0003 Score=63.08 Aligned_cols=115 Identities=20% Similarity=0.215 Sum_probs=71.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCHH--------------hhccCCcEEEEccCCCCc---
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNPE--------------EITRQADIIISAVGQPNM--- 294 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l~--------------~~l~~ADIVIsAvG~p~~--- 294 (371)
.++++||+|+|||.|.+ |.-.+..|++.|++|+++.... +++. +.+.++|+||.+|+.+..
T Consensus 8 ~l~l~~~~vlVvGGG~v-a~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e~N~~ 86 (157)
T PRK06719 8 MFNLHNKVVVIIGGGKI-AYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHAVNMM 86 (157)
T ss_pred EEEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHHHHHH
Confidence 36899999999999885 9999999999999999985331 1111 247889999999997653
Q ss_pred ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhh---hcceeccCCCCccHHHHHHHHHHHHHH
Q 017438 295 VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACE---VASAITPVPGGVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 295 v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~---~a~~iTPVPGGVGp~T~amLl~n~v~a 363 (371)
+. .+-+.+. .+.+.-++.. +|+-+.+..+ ..-+++ -||-+|.-+..|=+++-+.
T Consensus 87 i~-~~a~~~~-~vn~~d~~~~-----------~~f~~pa~v~~~~l~iais--T~G~sP~la~~lr~~ie~~ 143 (157)
T PRK06719 87 VK-QAAHDFQ-WVNVVSDGTE-----------SSFHTPGVIRNDEYVVTIS--TSGKDPSFTKRLKQELTSI 143 (157)
T ss_pred HH-HHHHHCC-cEEECCCCCc-----------CcEEeeeEEEECCeEEEEE--CCCcChHHHHHHHHHHHHH
Confidence 21 1223332 3333322211 2333322211 222343 4788998888876655443
No 119
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.30 E-value=0.00044 Score=67.78 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCHHhhccCCcEEEEccCCCCc---c---cCCCcCCCeEEEEe
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNPEEITRQADIIISAVGQPNM---V---RGSWIKPGAVIIDV 309 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l~~~l~~ADIVIsAvG~p~~---v---~~d~ik~gavVIDv 309 (371)
++++|.|||.|.+ |.+++..|.+.|.+|++.+|+. .++.+.++++|+||.+++.... + .+..++++.+|||+
T Consensus 3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~~~~~v~~~l~~~~~~~~~ivi~~ 81 (308)
T PRK14619 3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMKGVRPVAEQVQALNLPPETIIVTA 81 (308)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 5678999999885 9999999999999999998764 5788889999999999986432 2 22236788999997
Q ss_pred e
Q 017438 310 G 310 (371)
Q Consensus 310 g 310 (371)
.
T Consensus 82 s 82 (308)
T PRK14619 82 T 82 (308)
T ss_pred C
Confidence 5
No 120
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=97.24 E-value=0.00046 Score=69.22 Aligned_cols=79 Identities=22% Similarity=0.378 Sum_probs=62.0
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhccCCcEEEEccC-CC---Ccc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITRQADIIISAVG-QP---NMV 295 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~~ADIVIsAvG-~p---~~v 295 (371)
+.+++||+|.|+|.|.+ |+.+|..|..-|+.+.-+.|+.. ++.+.++++|+||.+.+ .+ ++|
T Consensus 157 g~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~li 235 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRI-GKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLI 235 (336)
T ss_pred cccccCCEEEEecCcHH-HHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHh
Confidence 56789999999999997 99999999998844444433321 67788999999998887 22 356
Q ss_pred cCC---CcCCCeEEEEeeec
Q 017438 296 RGS---WIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~~d---~ik~gavVIDvgin 312 (371)
..+ +.|+|+++|+++--
T Consensus 236 Nk~~~~~mk~g~vlVN~aRG 255 (336)
T KOG0069|consen 236 NKKFIEKMKDGAVLVNTARG 255 (336)
T ss_pred hHHHHHhcCCCeEEEecccc
Confidence 554 67999999999843
No 121
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.23 E-value=0.00055 Score=69.35 Aligned_cols=74 Identities=18% Similarity=0.291 Sum_probs=58.8
Q ss_pred CCCEEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCC-CCHHhhccCCcEEEEccCCCC---cccC-CCcCCCeEEEEee
Q 017438 237 KGKRAVVIG-RSNIVGMPAALLLQREDATVSIVHSRT-KNPEEITRQADIIISAVGQPN---MVRG-SWIKPGAVIIDVG 310 (371)
Q Consensus 237 ~GK~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l~~~l~~ADIVIsAvG~p~---~v~~-d~ik~gavVIDvg 310 (371)
..++|+||| .|. +|..++..|.+.|.+|+++++.. .+.++.+++||+||.+++... ++.. ..+++|++|+|+|
T Consensus 97 ~~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~~~~~~~~~l~~l~~~~iv~Dv~ 175 (374)
T PRK11199 97 DLRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIARLPPLPEDCILVDLT 175 (374)
T ss_pred ccceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHHHHHHHHHHHhCCCCCcEEEECC
Confidence 347899999 666 59999999999999999998754 356778899999999998433 2211 1178999999998
Q ss_pred e
Q 017438 311 I 311 (371)
Q Consensus 311 i 311 (371)
.
T Consensus 176 S 176 (374)
T PRK11199 176 S 176 (374)
T ss_pred C
Confidence 6
No 122
>PLN02342 ornithine carbamoyltransferase
Probab=97.22 E-value=0.021 Score=57.84 Aligned_cols=188 Identities=13% Similarity=0.119 Sum_probs=119.2
Q ss_pred eeeecHHHHHHHHHHHHHHHHHhHhcc--C------CCceEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--
Q 017438 81 KVIDGKAVAKQIRDEITGEVSRMKDAI--G------VVPGLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED-- 150 (371)
Q Consensus 81 ~ildGk~la~~i~~~ik~~v~~l~~~~--g------~~P~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~-- 150 (371)
.+|+-..+.++=.+.|-+...++|+.. + ..-+....++-+ .|..---.=..++.++|.++.++.-.+.
T Consensus 47 ~~lsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~~L~gk~va~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~ 124 (348)
T PLN02342 47 HFLHIDDFDKEEILGLLDRAKEVKALLKSGDRSFQPFKGKSMAMIFTK--PSMRTRVSFETGFFLLGGHALYLGPDDIQL 124 (348)
T ss_pred CccchhhCCHHHHHHHHHHHHHHHhhhhcCccccccCCCCEEEEEecC--CCcchHHHHHHHHHHcCCcEEEeCcccccC
Confidence 366666666544445555555555421 1 112233333332 3433334567889999999987632210
Q ss_pred CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHH-HHHHH
Q 017438 151 TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELL 229 (371)
Q Consensus 151 v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL 229 (371)
...|.+.+.+.-|..- +|+|.+-.|-. ..++.+...- .+-.+|.| .+.+.||=+.+ ++.+.
T Consensus 125 ~kGESl~DTarvLs~y--~D~IviR~~~~------~~~~~la~~~---~vPVINA~-------~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 125 GKREETRDIARVLSRY--NDIIMARVFAH------QDVLDLAEYS---SVPVINGL-------TDYNHPCQIMADALTII 186 (348)
T ss_pred CCCcCHHHHHHHHHHh--CCEEEEeCCCh------HHHHHHHHhC---CCCEEECC-------CCCCChHHHHHHHHHHH
Confidence 1235677777777764 78999886522 2233332221 24555642 23467998888 55555
Q ss_pred HHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------CCCHHhhccCCcEEEE
Q 017438 230 HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------TKNPEEITRQADIIIS 287 (371)
Q Consensus 230 ~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------t~~l~~~l~~ADIVIs 287 (371)
++.| +++|++|+++|-+.-|.+.++.++...|++|++|+-. +.|+++.+++||+|.+
T Consensus 187 e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~ 265 (348)
T PLN02342 187 EHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKARAAGISKIEITNDPAEAVKGADVVYT 265 (348)
T ss_pred HHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEE
Confidence 5555 7999999999998888999999999999999998522 2567788999999997
Q ss_pred cc
Q 017438 288 AV 289 (371)
Q Consensus 288 Av 289 (371)
-.
T Consensus 266 ~~ 267 (348)
T PLN02342 266 DV 267 (348)
T ss_pred CC
Confidence 63
No 123
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.20 E-value=0.00084 Score=66.78 Aligned_cols=75 Identities=19% Similarity=0.345 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhc--cCCCeEEEEeCCC--------------------CCHHhhccCCcEEEEccCCCC-
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQ--REDATVSIVHSRT--------------------KNPEEITRQADIIISAVGQPN- 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~--~~gAtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~p~- 293 (371)
.-+++.|||.|.. |+..+..|. ....+|.+++++. .+.++.+++|||||++|+..+
T Consensus 127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P 205 (325)
T TIGR02371 127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP 205 (325)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4578999999886 887544443 2335788887652 356788999999999998654
Q ss_pred cccCCCcCCCeEEEEeeec
Q 017438 294 MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin 312 (371)
++..+|+|||+.|.-+|.+
T Consensus 206 ~~~~~~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 206 VVKADWVSEGTHINAIGAD 224 (325)
T ss_pred EecHHHcCCCCEEEecCCC
Confidence 5789999999999999964
No 124
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.06 E-value=0.00076 Score=59.91 Aligned_cols=69 Identities=33% Similarity=0.457 Sum_probs=51.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------CCCHHhhccCCcEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
||+|+|+|.. |.++|..|..+|.+|++..++ |.|+++.+++||+||.+++.
T Consensus 1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899999996 999999999999999999654 35788999999999999986
Q ss_pred CCc---cc--CCCcCCCeEEEEe
Q 017438 292 PNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 292 p~~---v~--~d~ik~gavVIDv 309 (371)
..+ ++ ..+++++..+|-+
T Consensus 80 ~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 80 QAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp GGHHHHHHHHTTTSHTT-EEEET
T ss_pred HHHHHHHHHHhhccCCCCEEEEe
Confidence 432 21 2355778777754
No 125
>PLN02712 arogenate dehydrogenase
Probab=97.04 E-value=0.0011 Score=72.03 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=60.8
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------CHHhhcc-CCcEEEEccCCCC---c
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------NPEEITR-QADIIISAVGQPN---M 294 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------~l~~~l~-~ADIVIsAvG~p~---~ 294 (371)
.+.++++++|.|||.|.+ |..++..|.+.|.+|+++++... ++.+.+. ++|+||.+++... +
T Consensus 363 ~~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~v 441 (667)
T PLN02712 363 CVNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKV 441 (667)
T ss_pred ccCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHH
Confidence 345788999999999886 99999999999999999887632 3444454 5899999998432 2
Q ss_pred cc---CCCcCCCeEEEEeeec
Q 017438 295 VR---GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 v~---~d~ik~gavVIDvgin 312 (371)
+. ...+++|++|+|++..
T Consensus 442 i~~l~~~~lk~g~ivvDv~Sv 462 (667)
T PLN02712 442 LKSLPFQRLKRSTLFVDVLSV 462 (667)
T ss_pred HHHHHHhcCCCCcEEEECCCc
Confidence 22 2347899999999743
No 126
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.03 E-value=0.0021 Score=66.42 Aligned_cols=129 Identities=24% Similarity=0.272 Sum_probs=76.8
Q ss_pred HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----CHHhhccCCcEEEEccCC-CCcccCCCcCCC
Q 017438 229 LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----NPEEITRQADIIISAVGQ-PNMVRGSWIKPG 303 (371)
Q Consensus 229 L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----~l~~~l~~ADIVIsAvG~-p~~v~~d~ik~g 303 (371)
|.+++.+++||+|+|||.|.+ |..+|..|.++|++|+++++... .+.+.+++..|-+-. |. +. .....+
T Consensus 7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~-~~~~~----~~~~~D 80 (480)
T PRK01438 7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL-GPGPT----LPEDTD 80 (480)
T ss_pred hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE-CCCcc----ccCCCC
Confidence 567788899999999999996 99999999999999999986542 122333333332211 11 10 112234
Q ss_pred eEEEEeeecCCCCC---CCCCCceeecccchh-hhhh---hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 304 AVIIDVGINPVEDA---KSPRGYRLVGDVCYE-EACE---VASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 304 avVIDvgin~~~~~---~~~~g~kl~GDVd~~-~v~~---~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
.+|+-.|+.+...- -...|-.+.++.++- ...+ +.-.| -|-|=.|.-|+.-|+.++++.+
T Consensus 81 ~Vv~s~Gi~~~~~~~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I-~VTGTnGKTTTt~mi~~iL~~~ 147 (480)
T PRK01438 81 LVVTSPGWRPDAPLLAAAADAGIPVWGEVELAWRLRDPDRPAPWL-AVTGTNGKTTTVQMLASMLRAA 147 (480)
T ss_pred EEEECCCcCCCCHHHHHHHHCCCeecchHHHHHHhhhccCCCCEE-EEeCCCcHHHHHHHHHHHHHHc
Confidence 45555555443110 011233566766642 1111 11112 3568899999999999998764
No 127
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=97.00 E-value=0.0019 Score=64.00 Aligned_cols=73 Identities=26% Similarity=0.361 Sum_probs=40.9
Q ss_pred CEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC--------------------CCHHhhccCCcEEEEccCCCC---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT--------------------KNPEEITRQADIIISAVGQPN--- 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t--------------------~~l~~~l~~ADIVIsAvG~p~--- 293 (371)
+++.|||.|.- |+.-+..|.. ++ -+|.|.+++. .+.++.+++|||||++|+...
T Consensus 129 ~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P 207 (313)
T PF02423_consen 129 RTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP 207 (313)
T ss_dssp -EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred ceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence 45666666553 5544444332 22 2555555441 367899999999999999655
Q ss_pred cccCCCcCCCeEEEEeeec
Q 017438 294 MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin 312 (371)
+++.+|++||+.|+-+|.+
T Consensus 208 ~~~~~~l~~g~hi~~iGs~ 226 (313)
T PF02423_consen 208 VFDAEWLKPGTHINAIGSY 226 (313)
T ss_dssp SB-GGGS-TT-EEEE-S-S
T ss_pred cccHHHcCCCcEEEEecCC
Confidence 6899999999999999975
No 128
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.95 E-value=0.0013 Score=63.70 Aligned_cols=71 Identities=21% Similarity=0.383 Sum_probs=55.9
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cc-cC---
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-RG--- 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v-~~--- 297 (371)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .+..+.++++|+||.+++... .+ ..
T Consensus 1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~ 79 (291)
T TIGR01505 1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGI 79 (291)
T ss_pred CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchH
Confidence 4789999886 9999999999999999998762 356678899999999998542 11 21
Q ss_pred -CCcCCCeEEEEeee
Q 017438 298 -SWIKPGAVIIDVGI 311 (371)
Q Consensus 298 -d~ik~gavVIDvgi 311 (371)
..+++|.++||.+.
T Consensus 80 ~~~~~~g~iivd~st 94 (291)
T TIGR01505 80 IEGAKPGKTLVDMSS 94 (291)
T ss_pred hhcCCCCCEEEECCC
Confidence 24578999999764
No 129
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.95 E-value=0.0014 Score=61.22 Aligned_cols=59 Identities=19% Similarity=0.395 Sum_probs=48.1
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-CH-----------------HhhccCCcEEEEccCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NP-----------------EEITRQADIIISAVGQPN 293 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-~l-----------------~~~l~~ADIVIsAvG~p~ 293 (371)
++++||+|+|||.|.+ |..-+..|++.||.|||+..+.. .+ .+.+..+|+||.|+|.+.
T Consensus 5 l~l~gk~vlVvGgG~v-a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~ 81 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDV-ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE 81 (205)
T ss_pred EEcCCCeEEEECcCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH
Confidence 5789999999999885 99999999999999999965431 11 234778999999999764
No 130
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.95 E-value=0.0013 Score=65.87 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=59.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCC---cccC-
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPN---MVRG- 297 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~---~v~~- 297 (371)
.|+||+|.|||.|.+ |+++|..|...|.+|++.++.. .++.+.+++||+|+..++.+. ++..
T Consensus 13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~e 91 (335)
T PRK13403 13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAE 91 (335)
T ss_pred hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHH
Confidence 478999999999886 9999999999999999986542 157788999999999887533 3432
Q ss_pred --CCcCCCeEE-EEeeec
Q 017438 298 --SWIKPGAVI-IDVGIN 312 (371)
Q Consensus 298 --d~ik~gavV-IDvgin 312 (371)
..+++|+++ +-=|+|
T Consensus 92 il~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 92 VEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHhcCCCCCEEEECCCcc
Confidence 356888754 333444
No 131
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.94 E-value=0.0011 Score=62.46 Aligned_cols=73 Identities=30% Similarity=0.429 Sum_probs=57.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------CHHhhccCCcEEEEccCCCCc---cc--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------NPEEITRQADIIISAVGQPNM---VR-- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------~l~~~l~~ADIVIsAvG~p~~---v~-- 296 (371)
+++.|+|+|++ |..++..|...|.+|++-+|+.+ ..++..+.|||||.|++.... +.
T Consensus 2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence 57899999996 99999999999999999977643 345788999999999996543 21
Q ss_pred CCCcCCCeEEEEeeecCC
Q 017438 297 GSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 297 ~d~ik~gavVIDvgin~~ 314 (371)
.+++. |.+|||+. ||.
T Consensus 81 ~~~~~-~KIvID~t-np~ 96 (211)
T COG2085 81 RDALG-GKIVIDAT-NPI 96 (211)
T ss_pred HHHhC-CeEEEecC-CCc
Confidence 24445 89999987 554
No 132
>PLN02256 arogenate dehydrogenase
Probab=96.93 E-value=0.0021 Score=63.59 Aligned_cols=76 Identities=16% Similarity=0.280 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhc-cCCcEEEEccCCCC---ccc-
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEIT-RQADIIISAVGQPN---MVR- 296 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l-~~ADIVIsAvG~p~---~v~- 296 (371)
+-+++++.|||.|.+ |..++..|.+.|.+|+++++.. .++++.+ .++|+||.+++... ++.
T Consensus 33 ~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~~ 111 (304)
T PLN02256 33 KSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLRS 111 (304)
T ss_pred cCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHHh
Confidence 447889999999886 9999999999898899887653 2334444 46999999998432 232
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
...++++++|+|++.
T Consensus 112 l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 112 LPLQRLKRSTLFVDVLS 128 (304)
T ss_pred hhhhccCCCCEEEecCC
Confidence 234688999999996
No 133
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.93 E-value=0.0017 Score=62.78 Aligned_cols=74 Identities=20% Similarity=0.341 Sum_probs=57.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cc-cC--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MV-RG-- 297 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v-~~-- 297 (371)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ ..
T Consensus 3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~ 81 (296)
T PRK11559 3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENG 81 (296)
T ss_pred ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcch
Confidence 47999999886 9999999999999999998752 356677899999999998433 22 11
Q ss_pred --CCcCCCeEEEEeeecC
Q 017438 298 --SWIKPGAVIIDVGINP 313 (371)
Q Consensus 298 --d~ik~gavVIDvgin~ 313 (371)
..+++|.++||++...
T Consensus 82 ~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 82 IIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HhhcCCCCcEEEECCCCC
Confidence 2458899999997543
No 134
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.91 E-value=0.00051 Score=55.20 Aligned_cols=70 Identities=27% Similarity=0.396 Sum_probs=52.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCC---CeEEEE-eCCC---------------C-CHHhhccCCcEEEEccCCCCc--ccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED---ATVSIV-HSRT---------------K-NPEEITRQADIIISAVGQPNM--VRG 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g---AtVtv~-h~~t---------------~-~l~~~l~~ADIVIsAvG~p~~--v~~ 297 (371)
++.|||.|++ |..++..|.+.| .+|+++ +++. . +..+.+++||+||.++.-..+ +-.
T Consensus 1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS 79 (96)
T ss_dssp EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH
T ss_pred CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH
Confidence 5789999996 999999999999 899965 6652 2 566788899999999975442 211
Q ss_pred --CCcCCCeEEEEee
Q 017438 298 --SWIKPGAVIIDVG 310 (371)
Q Consensus 298 --d~ik~gavVIDvg 310 (371)
....++.++||+.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 2466788999874
No 135
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.90 E-value=0.0013 Score=64.15 Aligned_cols=74 Identities=18% Similarity=0.333 Sum_probs=58.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC----cccC-C-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN----MVRG-S- 298 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~----~v~~-d- 298 (371)
++|.|||.|.+ |.+++..|++.|.+|++++++. .+..+..+++|+||.+++... .+.. +
T Consensus 2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~ 80 (296)
T PRK15461 2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENG 80 (296)
T ss_pred CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCccc
Confidence 37999999986 9999999999999999998752 355677899999999998653 1221 1
Q ss_pred ---CcCCCeEEEEeeecC
Q 017438 299 ---WIKPGAVIIDVGINP 313 (371)
Q Consensus 299 ---~ik~gavVIDvgin~ 313 (371)
.+++|.++||++...
T Consensus 81 i~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 81 VCEGLSRDALVIDMSTIH 98 (296)
T ss_pred HhhcCCCCCEEEECCCCC
Confidence 357899999998654
No 136
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=96.90 E-value=0.024 Score=56.44 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=99.6
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCC-CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccC
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPE-DTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~-~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~ 201 (371)
.|..=--+=..++.++|-++.++.-.+ +...+.+.+.++-|+. .+|+|.+-.| .|-... .+...- .+-
T Consensus 53 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~--~~~~~~----~~a~~~---~vP 121 (311)
T PRK14804 53 TSTRTRVSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLK--KHEDLL----VMKNGS---QVP 121 (311)
T ss_pred CchhHHHHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCC--ChHHHH----HHHHHC---CCC
Confidence 344444456789999999988775432 1222344445666666 5899998865 322222 222211 234
Q ss_pred cchhhhhccCCCccccccCCHHH-HHHHHHHhCC-CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF-DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i-~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
.+|.| ...+.||=+.+ ++.+.|+.|. +++|++|++||.++-|.+.++.++...|++|++++-.
T Consensus 122 VINag-------~~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 194 (311)
T PRK14804 122 VINGC-------DNMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHA 194 (311)
T ss_pred EEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHH
Confidence 45643 12467998888 5555566654 6999999999997778999999999999999998632
Q ss_pred --------------CCCHHhhccCCcEEEEc
Q 017438 272 --------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.++.||+|.+-
T Consensus 195 ~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d 225 (311)
T PRK14804 195 QTVERAKKKGTLSWEMNLHKAVSHADYVYTD 225 (311)
T ss_pred HHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence 24667888999999973
No 137
>PRK06823 ornithine cyclodeaminase; Validated
Probab=96.87 E-value=0.0021 Score=63.82 Aligned_cols=40 Identities=23% Similarity=0.482 Sum_probs=34.5
Q ss_pred CCHHhhccCCcEEEEccCCCC-cccCCCcCCCeEEEEeeec
Q 017438 273 KNPEEITRQADIIISAVGQPN-MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 273 ~~l~~~l~~ADIVIsAvG~p~-~v~~d~ik~gavVIDvgin 312 (371)
.+.++.+++||||+++|+... +++.+|++||+.|+=+|.+
T Consensus 184 ~~~~~av~~ADIV~taT~s~~P~~~~~~l~~G~hi~~iGs~ 224 (315)
T PRK06823 184 LDAAEVAHAANLIVTTTPSREPLLQAEDIQPGTHITAVGAD 224 (315)
T ss_pred CCHHHHhcCCCEEEEecCCCCceeCHHHcCCCcEEEecCCC
Confidence 357788999999999999655 5899999999999999954
No 138
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.85 E-value=0.0016 Score=63.92 Aligned_cols=92 Identities=18% Similarity=0.334 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC----CC-------eEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE----DA-------TVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~----gA-------tVtv~h~~------------------ 271 (371)
+-.|++..|+-.+.+|+..+++++|+|.+ |..++.+|... |. .+++++++
T Consensus 8 ~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a 86 (279)
T cd05312 8 ALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFA 86 (279)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHH
Confidence 45789999999999999999999999987 99999888765 76 68888765
Q ss_pred --C-----CCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 --T-----KNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 --t-----~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
+ .+|.+.++ ++|++|...+.|+.+++|+|+ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 143 (279)
T cd05312 87 RKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALS-NPT 143 (279)
T ss_pred hhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-CcC
Confidence 1 25788888 899999999988999999874 356776666 543
No 139
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.81 E-value=0.0023 Score=62.72 Aligned_cols=74 Identities=24% Similarity=0.350 Sum_probs=57.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCH-HhhccCCcEEEEccCCCC---cc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNP-EEITRQADIIISAVGQPN---MV 295 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l-~~~l~~ADIVIsAvG~p~---~v 295 (371)
-++|+|+|.|.+ |+.++..|..+|..|.++.+.. .+. .+....||+||.+++... ++
T Consensus 3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l 81 (279)
T COG0287 3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL 81 (279)
T ss_pred CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH
Confidence 468999999886 9999999999999998886542 122 566788999999998543 22
Q ss_pred cC--CCcCCCeEEEEeeec
Q 017438 296 RG--SWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~~--d~ik~gavVIDvgin 312 (371)
+. ..+++|++|.|++..
T Consensus 82 ~~l~~~l~~g~iv~Dv~S~ 100 (279)
T COG0287 82 KELAPHLKKGAIVTDVGSV 100 (279)
T ss_pred HHhcccCCCCCEEEecccc
Confidence 11 168999999999964
No 140
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.80 E-value=0.0024 Score=65.33 Aligned_cols=111 Identities=22% Similarity=0.248 Sum_probs=77.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
++|+|||+|+ ||+++|+.|++++ ..|++..|+. +.+.+++++.|+||++.+...
T Consensus 2 ~~ilviGaG~-Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGG-VGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCch-hHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 6899999988 5999999999998 7999998761 245688999999999998654
Q ss_pred c--ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCC-CccHHHHHHHHHHHHHH
Q 017438 294 M--VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPG-GVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 294 ~--v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPG-GVGp~T~amLl~n~v~a 363 (371)
- +-...++-|.-++|+.+.... . -++++.+++||. |-++| |+-|=-+..+...+++-
T Consensus 81 ~~~i~ka~i~~gv~yvDts~~~~~---------~---~~~~~~a~~Agi-t~v~~~G~dPGi~nv~a~~a~~~ 140 (389)
T COG1748 81 DLTILKACIKTGVDYVDTSYYEEP---------P---WKLDEEAKKAGI-TAVLGCGFDPGITNVLAAYAAKE 140 (389)
T ss_pred hHHHHHHHHHhCCCEEEcccCCch---------h---hhhhHHHHHcCe-EEEcccCcCcchHHHHHHHHHHH
Confidence 2 333557889999999876532 1 122344666762 33443 55565555666555443
No 141
>PRK06046 alanine dehydrogenase; Validated
Probab=96.76 E-value=0.0031 Score=62.63 Aligned_cols=74 Identities=26% Similarity=0.418 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CCC-eEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-EDA-TVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~gA-tVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
.-+++.|||.|.. |+..+..|.. .+. .|.+++++. .++++.+. +|+||++|+...
T Consensus 128 ~~~~vgiiG~G~q-a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~ 205 (326)
T PRK06046 128 DSKVVGIIGAGNQ-ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRK 205 (326)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCC
Confidence 4578999999996 8888777763 344 688887652 24556665 999999999544
Q ss_pred -cccCCCcCCCeEEEEeeec
Q 017438 294 -MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 -~v~~d~ik~gavVIDvgin 312 (371)
+++.+|+|+|+.|.-+|.+
T Consensus 206 P~~~~~~l~~g~hV~~iGs~ 225 (326)
T PRK06046 206 PVVKAEWIKEGTHINAIGAD 225 (326)
T ss_pred cEecHHHcCCCCEEEecCCC
Confidence 5899999999999999964
No 142
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.75 E-value=0.0016 Score=63.07 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-----------eEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-----------TVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-----------tVtv~h~~------------------ 271 (371)
|-.|++..++-.+.+|+..+++++|+|-+ |..++.+|...+. .+++++++
T Consensus 8 ~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~ 86 (254)
T cd00762 8 AVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLA 86 (254)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHH
Confidence 45688999999999999999999999987 9999998876543 58888765
Q ss_pred --------CCCHHhhcc--CCcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 --------TKNPEEITR--QADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 --------t~~l~~~l~--~ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++ ++|++|...+.|+.+++|+|+ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 144 (254)
T cd00762 87 RFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALS-NPT 144 (254)
T ss_pred HHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECC-CcC
Confidence 126778888 999999999999999999884 355666665 443
No 143
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.74 E-value=0.0018 Score=63.26 Aligned_cols=73 Identities=26% Similarity=0.368 Sum_probs=56.6
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~ 296 (371)
.++|.|||.|.+ |..++..|.+.|. .|++++++. .++.+.++++|+||.+++... ++.
T Consensus 6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~ 84 (307)
T PRK07502 6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAA 84 (307)
T ss_pred CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHH
Confidence 368999999885 9999999998884 788887652 245667889999999998533 121
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
..+++++.+|+|+|.
T Consensus 85 ~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 85 EIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHhhCCCCCEEEeCcc
Confidence 246789999999985
No 144
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=96.74 E-value=0.0088 Score=63.96 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=78.3
Q ss_pred cccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhcc-----CCC-------eEEEEeCC-----------
Q 017438 215 PLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQR-----EDA-------TVSIVHSR----------- 271 (371)
Q Consensus 215 ~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~-----~gA-------tVtv~h~~----------- 271 (371)
.+-.-++-.|++..++-.+.+|+..+++++|+|.+ |..+|.+|.. .|. .+++++++
T Consensus 298 QGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l 376 (581)
T PLN03129 298 QGTAAVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSL 376 (581)
T ss_pred chHHHHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccC
Confidence 34345666889999999999999999999999987 9999988876 354 68888654
Q ss_pred -------------CCCHHhhccC--CcEEEEccCCCCcccCCCcC------CCeEEEEeeecCC
Q 017438 272 -------------TKNPEEITRQ--ADIIISAVGQPNMVRGSWIK------PGAVIIDVGINPV 314 (371)
Q Consensus 272 -------------t~~l~~~l~~--ADIVIsAvG~p~~v~~d~ik------~gavVIDvgin~~ 314 (371)
..+|.+.++. +|++|...+.++.++++||+ +.-+|+=+. ||.
T Consensus 377 ~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~~rPIIFaLS-NPt 439 (581)
T PLN03129 377 QPFKKPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALS-NPT 439 (581)
T ss_pred hHHHHHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 1367788888 99999999988999999886 566777666 543
No 145
>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.70 E-value=0.21 Score=49.79 Aligned_cols=146 Identities=12% Similarity=0.064 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..---+=..++.++|..+.++ .... ..|-+.+.++-|+.- .+++|.+--| .|-..+.+.+.+ ..
T Consensus 56 STRTR~SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~------~~ 124 (310)
T PRK13814 56 STRTRNSFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQL------SS 124 (310)
T ss_pred cchhHHHHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhC------CC
Confidence 3333335577889999987664 3221 124566666666652 3567777654 322222232222 12
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCC-eEEEEeCC----
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDA-TVSIVHSR---- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gA-tVtv~h~~---- 271 (371)
+-++|.| ..+.+.||=+.+ ++.+.|+.| +++|++|+++|-+ +-|.+.++.++...|. +|++|+-.
T Consensus 125 vPvINag------~g~~~HPtQaLaDl~Ti~e~~g-~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~~p 197 (310)
T PRK13814 125 GVVINAG------DGNHQHPSQALIDLMTIKQHKP-HWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSLLP 197 (310)
T ss_pred CCeEECC------cCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCcccCc
Confidence 4556643 234677998888 444444444 7999999999985 4469999999999998 89998632
Q ss_pred ----------CCCHHhhccCCcEEEE
Q 017438 272 ----------TKNPEEITRQADIIIS 287 (371)
Q Consensus 272 ----------t~~l~~~l~~ADIVIs 287 (371)
+.++++.+++||+|.+
T Consensus 198 ~~~~~~~~~~~~d~~ea~~~aDvvy~ 223 (310)
T PRK13814 198 DKVGNDSIKKFTELKPSLLNSDVIVT 223 (310)
T ss_pred CccccceEEEEcCHHHHhCCCCEEEE
Confidence 2577899999999986
No 146
>PRK07589 ornithine cyclodeaminase; Validated
Probab=96.69 E-value=0.0035 Score=63.23 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=51.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCC--------------------CCCHHhhccCCcEEEEccCCC---
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSR--------------------TKNPEEITRQADIIISAVGQP--- 292 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~--------------------t~~l~~~l~~ADIVIsAvG~p--- 292 (371)
-+++.|||.|.- ++.-+..+.. +. -+|++.+++ ..++++.+++||||+++|+..
T Consensus 129 a~~l~iiGaG~Q-A~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~ 207 (346)
T PRK07589 129 SRTMALIGNGAQ-SEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNA 207 (346)
T ss_pred CcEEEEECCcHH-HHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCC
Confidence 356777777664 5544333321 22 356666554 145788999999999999854
Q ss_pred CcccCCCcCCCeEEEEeeec
Q 017438 293 NMVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 293 ~~v~~d~ik~gavVIDvgin 312 (371)
.+++.+|+|||+.|.=+|.+
T Consensus 208 Pvl~~~~lkpG~hV~aIGs~ 227 (346)
T PRK07589 208 TILTDDMVEPGMHINAVGGD 227 (346)
T ss_pred ceecHHHcCCCcEEEecCCC
Confidence 35899999999999999954
No 147
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=96.66 E-value=0.025 Score=56.92 Aligned_cols=146 Identities=14% Similarity=0.066 Sum_probs=100.0
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccC
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVD 198 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~v----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVD 198 (371)
.|..=--+=..++.++|.++.+.. .+. ..|.+.+.++-|+.- +|+|.+--| .| ..++.+...-.
T Consensus 55 pSTRTR~SFe~A~~~LGg~~i~l~--~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~--~~----~~~~~~a~~~~-- 122 (336)
T PRK03515 55 DSTRTRCSFEVAAYDQGARVTYLG--PSGSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQ----EIVETLAEYAG-- 122 (336)
T ss_pred CChhHHHHHHHHHHHcCCcEEEeC--CccccCCCCCCHHHHHHHHHHh--CcEEEEEeC--Ch----HHHHHHHHhCC--
Confidence 344444456788999999988753 222 236688888888774 789999865 32 22333322112
Q ss_pred ccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC-CCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC----
Q 017438 199 GFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF-DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR---- 271 (371)
Q Consensus 199 gl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i-~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~---- 271 (371)
+-.+|.+ .+...||=+.+ ++.+.++.|. +++|+++++||-+ .-|.+.++.++...|++|++|+-.
T Consensus 123 -vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~ 194 (336)
T PRK03515 123 -VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWP 194 (336)
T ss_pred -CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcC
Confidence 3445631 23567998888 5566566553 7999999999975 347999999999999999998632
Q ss_pred ---------------------CCCHHhhccCCcEEEEc
Q 017438 272 ---------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 ---------------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.+++||+|.+-
T Consensus 195 ~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 195 EAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred cHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 25677889999999975
No 148
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.60 E-value=0.0017 Score=62.76 Aligned_cols=71 Identities=24% Similarity=0.275 Sum_probs=54.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------HHhhccCCcEEEEccCCCCc---cc--CCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------PEEITRQADIIISAVGQPNM---VR--GSW 299 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------l~~~l~~ADIVIsAvG~p~~---v~--~d~ 299 (371)
+|.|||.|.+ |..++..|.+.|.+|++++++... ..+.+++||+||.+++.... ++ ...
T Consensus 2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~ 80 (279)
T PRK07417 2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPA 80 (279)
T ss_pred eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHh
Confidence 6899999885 999999999999999999875321 12357899999999984322 21 134
Q ss_pred cCCCeEEEEeee
Q 017438 300 IKPGAVIIDVGI 311 (371)
Q Consensus 300 ik~gavVIDvgi 311 (371)
++++++|.|++.
T Consensus 81 l~~~~ii~d~~S 92 (279)
T PRK07417 81 LPPEAIVTDVGS 92 (279)
T ss_pred CCCCcEEEeCcc
Confidence 688999999984
No 149
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.60 E-value=0.0032 Score=63.23 Aligned_cols=73 Identities=25% Similarity=0.392 Sum_probs=55.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCHHhhccCCcEEEEccCCCC---cc--
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNPEEITRQADIIISAVGQPN---MV-- 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l~~~l~~ADIVIsAvG~p~---~v-- 295 (371)
++|.|||.|.+ |..++..|.+.|..|.+..+.. .++++.+++||+||.+++... ++
T Consensus 1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~ 79 (359)
T PRK06545 1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAE 79 (359)
T ss_pred CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence 47999999886 9999999999998887776432 234566789999999998532 22
Q ss_pred -cCCCcCCCeEEEEeeec
Q 017438 296 -RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 -~~d~ik~gavVIDvgin 312 (371)
.+..++++++|.|++.-
T Consensus 80 l~~~~l~~~~ivtDv~Sv 97 (359)
T PRK06545 80 LADLELKPGVIVTDVGSV 97 (359)
T ss_pred HhhcCCCCCcEEEeCccc
Confidence 22147889999999854
No 150
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=96.59 E-value=0.031 Score=56.15 Aligned_cols=145 Identities=14% Similarity=0.117 Sum_probs=99.3
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC----CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT----SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..=--+=..++.++|.++..+ +.+. ..|.+.+.++-|..- +|+|.+--| .| ..++.+...-+
T Consensus 57 STRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~--~~----~~~~~~a~~~~--- 123 (334)
T PRK01713 57 STRTRCAFEVAAYDQGAQVTYI--DPNSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQ----SIVNELAEYAG--- 123 (334)
T ss_pred CchHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEEcC--ch----HHHHHHHHhCC---
Confidence 4433345567889999998765 3221 235677787777774 889998755 22 22333322222
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
+-.+|.+ .+...||=+.+ ++.+.++.+.+++|+++++||-+ ..|.+.++.++...|++|++|+-.
T Consensus 124 vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~ 196 (334)
T PRK01713 124 VPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEA 196 (334)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCCH
Confidence 3445642 23467998887 56666666657999999999986 447999999999999999998632
Q ss_pred -------------------CCCHHhhccCCcEEEEc
Q 017438 272 -------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsA 288 (371)
+.|+++.+++||+|.+-
T Consensus 197 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~ 232 (334)
T PRK01713 197 SLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD 232 (334)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 24677889999999973
No 151
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.57 E-value=0.0043 Score=61.26 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CC-CeEEEEeCCC---------------------CCHHhhccCCcEEEEccCCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-ED-ATVSIVHSRT---------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~g-AtVtv~h~~t---------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
.-+++.|||+|.- |+.-+..+.. ++ -+|.|.+++. .+.++.+++||||+++|+...
T Consensus 116 da~~l~iiGaG~Q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~ 194 (301)
T PRK06407 116 NVENFTIIGSGFQ-AETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDT 194 (301)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCC
Confidence 4688889999775 7766655553 33 3677776552 357788999999999999665
Q ss_pred -cccCCCcCCCeEEEEeeec
Q 017438 294 -MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 -~v~~d~ik~gavVIDvgin 312 (371)
+++.+|++||+.|.=+|.+
T Consensus 195 P~~~~~~l~pg~hV~aiGs~ 214 (301)
T PRK06407 195 PIFNRKYLGDEYHVNLAGSN 214 (301)
T ss_pred cEecHHHcCCCceEEecCCC
Confidence 5799999999999999965
No 152
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=96.57 E-value=0.16 Score=51.13 Aligned_cols=148 Identities=14% Similarity=0.060 Sum_probs=101.6
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
.|..---+=..++.++|.++.++.- .+ ...|.+.+.++-|+.- +++|.+--|-. ..+..+...-+
T Consensus 55 pSTRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~~------~~~~~~a~~~~--- 122 (334)
T PRK12562 55 DSTRTRCSFEVAAYDQGARVTYLGP-SGSQIGHKESIKDTARVLGRM--YDGIQYRGHGQ------EVVETLAEYAG--- 122 (334)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCC-ccccCCCCcCHHHHHHHHHHh--CCEEEEECCch------HHHHHHHHhCC---
Confidence 3444444567889999999987742 22 1235678888877774 88999986522 23333432223
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC-CCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC-----
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF-DIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR----- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i-~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~----- 271 (371)
+-.+|.| .+...||=+.+ ++.+.++.+. .++|+++++||-+ ..|.+.++.++...|++|++|+-.
T Consensus 123 vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~ 195 (334)
T PRK12562 123 VPVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPE 195 (334)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCc
Confidence 3455642 23466998887 5555566653 5899999999985 347999999999999999998632
Q ss_pred --------------------CCCHHhhccCCcEEEEcc
Q 017438 272 --------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 --------------------t~~l~~~l~~ADIVIsAv 289 (371)
+.|+++.+++||+|.+-.
T Consensus 196 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 233 (334)
T PRK12562 196 ASLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDV 233 (334)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 256778899999999754
No 153
>PRK13529 malate dehydrogenase; Provisional
Probab=96.56 E-value=0.015 Score=62.12 Aligned_cols=164 Identities=20% Similarity=0.247 Sum_probs=110.9
Q ss_pred HHHHHHHHHc-CCe---EEEEeCCCCCC--------------------------HHHHHHHHHHhcCCCCccEEEEeCCC
Q 017438 129 RNKKKACQSV-GIN---SFEVHLPEDTS--------------------------EQEVLKHISVFNDDPSVHGILVQLPL 178 (371)
Q Consensus 129 ~~k~k~~~~~-GI~---~~~~~lp~~v~--------------------------~~el~~~I~~LN~D~~V~GIlVqlPL 178 (371)
..|.-.+..+ ||+ +.-+.|+..+. -+|+.++++.+- |++ ++|+==
T Consensus 173 ~GKl~Ly~a~aGI~P~~~lPI~LDvGTnNe~Ll~DP~YlG~r~~R~~g~eY~~f~defv~av~~~~--P~~---~I~~ED 247 (563)
T PRK13529 173 IGKLSLYTACGGIDPARTLPVVLDVGTNNEQLLNDPLYLGWRHPRIRGEEYDEFVDEFVQAVKRRF--PNA---LLQFED 247 (563)
T ss_pred ccHHHHhhccCCCChhheeceEEecCCCchhhccCccccCcCCCCCchHHHHHHHHHHHHHHHHhC--CCe---EEehhh
Confidence 4677777776 688 77777764322 367777777775 553 444321
Q ss_pred CCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHh
Q 017438 179 PCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258 (371)
Q Consensus 179 p~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL 258 (371)
...-+.-++++.. .+++-.|| ++..+-.-+|-.|++..++-.+.+++..+++++|+|.+ |..+|.+|
T Consensus 248 f~~~~af~iL~ry--r~~i~~Fn----------DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsA-giGia~ll 314 (563)
T PRK13529 248 FAQKNARRILERY--RDEICTFN----------DDIQGTGAVTLAGLLAALKITGEPLSDQRIVFLGAGSA-GCGIADQI 314 (563)
T ss_pred cCCchHHHHHHHh--ccCCCeec----------cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHH
Confidence 1111333444443 22332222 22334445666889999999999999999999999987 99999988
Q ss_pred cc----CCC-------eEEEEeCC--------------------C------------CCHHhhccCC--cEEEEccCCCC
Q 017438 259 QR----EDA-------TVSIVHSR--------------------T------------KNPEEITRQA--DIIISAVGQPN 293 (371)
Q Consensus 259 ~~----~gA-------tVtv~h~~--------------------t------------~~l~~~l~~A--DIVIsAvG~p~ 293 (371)
.. +|. .+++|+++ + .+|.+.++.+ |++|...+.|+
T Consensus 315 ~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g 394 (563)
T PRK13529 315 VAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPG 394 (563)
T ss_pred HHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCC
Confidence 86 576 68888754 0 2578889988 99999999899
Q ss_pred cccCCCcCC------CeEEEEee
Q 017438 294 MVRGSWIKP------GAVIIDVG 310 (371)
Q Consensus 294 ~v~~d~ik~------gavVIDvg 310 (371)
.+++|+|+. .-+|+=+.
T Consensus 395 ~Ft~evv~~Ma~~~erPIIFaLS 417 (563)
T PRK13529 395 AFTEEIVKEMAAHCERPIIFPLS 417 (563)
T ss_pred CCCHHHHHHHHhcCCCCEEEECC
Confidence 999988753 45666555
No 154
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.56 E-value=0.0023 Score=62.03 Aligned_cols=92 Identities=22% Similarity=0.334 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccC----CC-------eEEEEeCC------------------
Q 017438 221 TPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQRE----DA-------TVSIVHSR------------------ 271 (371)
Q Consensus 221 Ta~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~----gA-------tVtv~h~~------------------ 271 (371)
|-.|++..++-.+.+|+..+++++|+|.+ |-.++.+|... |. .+++++++
T Consensus 8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a 86 (255)
T PF03949_consen 8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA 86 (255)
T ss_dssp HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence 34678999999999999999999999987 98888888765 76 48999865
Q ss_pred -----C---CCHHhhccCC--cEEEEccCCCCcccCCCcCC------CeEEEEeeecCC
Q 017438 272 -----T---KNPEEITRQA--DIIISAVGQPNMVRGSWIKP------GAVIIDVGINPV 314 (371)
Q Consensus 272 -----t---~~l~~~l~~A--DIVIsAvG~p~~v~~d~ik~------gavVIDvgin~~ 314 (371)
. .+|.+.++++ |++|...|.|+.+++|+|+. .-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LS-NPt 144 (255)
T PF03949_consen 87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLS-NPT 144 (255)
T ss_dssp BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-S-SSC
T ss_pred ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECC-CCC
Confidence 1 2788999999 99999999999999998853 45666665 443
No 155
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.55 E-value=0.031 Score=55.50 Aligned_cols=149 Identities=13% Similarity=0.221 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCC--CCCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccC
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPE--DTSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~--~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~ 201 (371)
|..=--+=..++.++|.++.++.-.+ -...|-+.+.++-|+.- ++|+|.+--| .| ..+..+...- .+-
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~--~~----~~~~~~a~~~---~vP 125 (305)
T PRK00856 56 STRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHP--QS----GAARLLAESS---DVP 125 (305)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCC--Ch----HHHHHHHHHC---CCC
Confidence 44444466788999999987654221 01224566666666652 3788888755 22 2233332211 234
Q ss_pred cchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC-------
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR------- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~------- 271 (371)
.+|.|- .+...||=+.+ ++.+.|+.| +++|++|++||-+ +-|.+.++.++...|++|++|+-.
T Consensus 126 VINa~~------g~~~HPtQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~ 198 (305)
T PRK00856 126 VINAGD------GSHQHPTQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM 198 (305)
T ss_pred EEECCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence 556421 13567998888 666666665 6999999999885 446999999999999999999632
Q ss_pred -----CCCHHhhccCCcEEEEcc
Q 017438 272 -----TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----t~~l~~~l~~ADIVIsAv 289 (371)
+.++.+.++.||+|.+-.
T Consensus 199 ~~~~~~~d~~ea~~~aDvvyt~~ 221 (305)
T PRK00856 199 PEYGVHTDLDEVIEDADVVMMLR 221 (305)
T ss_pred cceEEECCHHHHhCCCCEEEECC
Confidence 356788999999999855
No 156
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=96.55 E-value=0.047 Score=54.98 Aligned_cols=145 Identities=12% Similarity=0.128 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..=--+=..++.++|-++.++.- .+. ..|.+.+.+.-|+.- +|+|.+-.+ .|-. ++.+...- .+
T Consensus 53 STRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~----~~~~a~~~---~v 120 (338)
T PRK02255 53 STRTRVSFETAMTQLGGHAQYLAP-GQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQT----VVELAKYA---TV 120 (338)
T ss_pred CcchHHHHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHH----HHHHHHhC---CC
Confidence 433334567889999999887752 221 235677788777774 788888754 3222 22232211 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhC--CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYG--FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~--i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.+ .+...||=+.+ ++.+.++.+ -+++|++|++||-..-|.+.++.++...|++|++|+-.
T Consensus 121 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~ 193 (338)
T PRK02255 121 PVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGYQLPE 193 (338)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCccccCH
Confidence 455631 23457998887 555556664 36999999999997778999999999999999998632
Q ss_pred -------------------CCCHHhhccCCcEEEE
Q 017438 272 -------------------TKNPEEITRQADIIIS 287 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIs 287 (371)
+.++++.++.||+|.+
T Consensus 194 ~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~ 228 (338)
T PRK02255 194 EHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYT 228 (338)
T ss_pred HHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEE
Confidence 2567889999999998
No 157
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.53 E-value=0.0036 Score=60.74 Aligned_cols=69 Identities=23% Similarity=0.321 Sum_probs=54.6
Q ss_pred EEcCCcccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhhccCCcEEEEccCCCCc----cc--C---CC
Q 017438 243 VIGRSNIVGMPAALLLQREDATVSIVHSR--------------TKNPEEITRQADIIISAVGQPNM----VR--G---SW 299 (371)
Q Consensus 243 VIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~l~~ADIVIsAvG~p~~----v~--~---d~ 299 (371)
+||.|.+ |.+++..|.+.|.+|++++++ +.+..+.++++|+||.+++.+.. +. . +.
T Consensus 1 ~IGlG~m-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~ 79 (288)
T TIGR01692 1 FIGLGNM-GGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPK 79 (288)
T ss_pred CCcccHh-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhc
Confidence 5799886 999999999999999999876 24667788999999999986542 21 1 24
Q ss_pred cCCCeEEEEeeec
Q 017438 300 IKPGAVIIDVGIN 312 (371)
Q Consensus 300 ik~gavVIDvgin 312 (371)
+++|.++||++..
T Consensus 80 ~~~g~~vid~st~ 92 (288)
T TIGR01692 80 VAKGSLLIDCSTI 92 (288)
T ss_pred CCCCCEEEECCCC
Confidence 5789999999854
No 158
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.52 E-value=0.005 Score=60.21 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=55.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccC---CcEEEEccCCCCc----cc--
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQ---ADIIISAVGQPNM----VR-- 296 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~---ADIVIsAvG~p~~----v~-- 296 (371)
++.+||.|.+ |.+++..|.+.|.+|++++++. .+.++..++ +|+||++++.+.. +.
T Consensus 2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i 80 (299)
T PRK12490 2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDL 80 (299)
T ss_pred EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHH
Confidence 5899999986 9999999999999999998762 345566555 6999999987632 21
Q ss_pred CCCcCCCeEEEEeeec
Q 017438 297 GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d~ik~gavVIDvgin 312 (371)
.+.+++|.++||++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 1346789999999654
No 159
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.52 E-value=0.004 Score=63.33 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCC---CCCHHhhccCCcEEEEccCCCC---cccC-----CCcCCCe
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSR---TKNPEEITRQADIIISAVGQPN---MVRG-----SWIKPGA 304 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~---t~~l~~~l~~ADIVIsAvG~p~---~v~~-----d~ik~ga 304 (371)
.-.+|+|||.+|.+|..++..|.+. +.+|+.+.+. ..++.+.+++||+||.|++... ++.. .++++|+
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~~~~~~l~~l~~~~~~l~~~~ 82 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIRHTAALIEEYVALAGGRAAGQ 82 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHHHHHHHHHHHhhhhcCCCCCe
Confidence 4568999999444599999999865 7788888653 3457788999999999998533 2321 2379999
Q ss_pred EEEEeeec
Q 017438 305 VIIDVGIN 312 (371)
Q Consensus 305 vVIDvgin 312 (371)
+|.|+|.-
T Consensus 83 iVtDVgSv 90 (370)
T PRK08818 83 LWLDVTSI 90 (370)
T ss_pred EEEECCCC
Confidence 99999963
No 160
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=96.51 E-value=0.17 Score=50.21 Aligned_cols=147 Identities=15% Similarity=0.186 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..=--+=..++.++|.++.++.-+.+. ..|-+.+...-|+.- +|+|.+--| .|-....+.+.. .+
T Consensus 50 STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~s-------~v 118 (301)
T TIGR00670 50 STRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAAEVS-------EV 118 (301)
T ss_pred CchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHHhhC-------CC
Confidence 4444446678999999998776441221 235577777777663 788988865 332333332222 23
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
-.+|.|- ...+.||=+.+ ++.+.++.| +++|++|+++|-+ +-|.+.++.++...|++|++++-.
T Consensus 119 PVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~ 191 (301)
T TIGR00670 119 PVINAGD------GSNQHPTQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPK 191 (301)
T ss_pred CEEeCCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 4556421 13467998888 555555555 7999999999996 457999999999999999999633
Q ss_pred ---------------CCCHHhhccCCcEEEEc
Q 017438 272 ---------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 ---------------t~~l~~~l~~ADIVIsA 288 (371)
+.|+++.++.||+|.+-
T Consensus 192 ~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~ 223 (301)
T TIGR00670 192 EILEELKAKGIKVRETESLEEVIDEADVLYVT 223 (301)
T ss_pred HHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence 24667889999998874
No 161
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=96.50 E-value=0.04 Score=55.33 Aligned_cols=145 Identities=12% Similarity=-0.007 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCC----HHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDTS----EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..=--+=..++.++|.++.+. +...+ -|.+.+.+.-|+.- +|+|.+--| .| ..++.+...-.
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~--~~----~~~~~~a~~s~--- 122 (332)
T PRK04284 56 STRTRCAFEVAAYDQGAHVTYL--GPTGSQMGKKESTKDTARVLGGM--YDGIEYRGF--SQ----RTVETLAEYSG--- 122 (332)
T ss_pred ChhHHHHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEecC--ch----HHHHHHHHhCC---
Confidence 4433345678899999998754 32222 36678888877774 889998755 22 23333322212
Q ss_pred cCcchhhhhccCCCccccccCCHHHHHHHHHHh-CCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC------
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKGCIELLHRY-GFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR------ 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~-~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~------ 271 (371)
+-.+|.| .+...||=+.+=+--+.++ ..+++|++|++||-+ +-|.+.++.+|...|++|++|+-.
T Consensus 123 vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~ 195 (332)
T PRK04284 123 VPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKELNPDD 195 (332)
T ss_pred CCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 3455632 2346799888844444444 347999999999975 347999999999999999998633
Q ss_pred -------------------CCCHHhhccCCcEEEEc
Q 017438 272 -------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsA 288 (371)
+.|+++.+++||+|.+-
T Consensus 196 ~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 196 ELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 24677889999999975
No 162
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.50 E-value=0.0049 Score=58.08 Aligned_cols=115 Identities=21% Similarity=0.372 Sum_probs=71.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------CCHHhhccCCcEEEEccCCCCc-
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------KNPEEITRQADIIISAVGQPNM- 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------~~l~~~l~~ADIVIsAvG~p~~- 294 (371)
++++||+|+|||.|.+ |.-=+.+|++.||+|+|..-.. .-..+.+..+++||.||+.+.+
T Consensus 8 ~~l~~k~VlvvGgG~v-a~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGSV-ALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence 5789999999999885 9889999999999999985432 1112455669999999997653
Q ss_pred --ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHHHH
Q 017438 295 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTLTS 363 (371)
Q Consensus 295 --v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~n~v~a 363 (371)
|-.. -++-.+.+++.-.|. .+|+-|.+..++ .-+|+ -||-+|+.+.|+.+.....
T Consensus 87 ~~i~~~-a~~~~i~vNv~D~p~-----------~~~f~~Pa~~~r~~l~iaIs--T~G~sP~la~~ir~~Ie~~ 146 (210)
T COG1648 87 ERIAKA-ARERRILVNVVDDPE-----------LCDFIFPAIVDRGPLQIAIS--TGGKSPVLARLLREKIEAL 146 (210)
T ss_pred HHHHHH-HHHhCCceeccCCcc-----------cCceecceeeccCCeEEEEE--CCCCChHHHHHHHHHHHHH
Confidence 2111 111123334332221 134444332222 22333 4788888888888766543
No 163
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=96.50 E-value=0.044 Score=55.07 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=102.8
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC---CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED---TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSIL 188 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~---v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~ 188 (371)
+....++-+ .|..=--+=..++.++|.++.+..- .+ ...|.+.+.+.-|..- +++|.+--|-. ..+
T Consensus 47 k~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~rvls~y--~D~iviR~~~~------~~~ 115 (331)
T PRK02102 47 KNIALIFEK--TSTRTRCAFEVAAIDLGAHVTYLGP-NDSQLGKKESIEDTARVLGRM--YDGIEYRGFKQ------EIV 115 (331)
T ss_pred CEEEEEeCC--CChhHHHHHHHHHHHcCCCEEEcCc-ccccCCCCcCHHHHHHHHhhc--CCEEEEECCch------HHH
Confidence 334444432 3444444567889999999875532 11 1235678888877764 88999886522 233
Q ss_pred hhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC-cccHHHHHHHhccCCCeEEE
Q 017438 189 NAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS-NIVGMPAALLLQREDATVSI 267 (371)
Q Consensus 189 ~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv 267 (371)
+.+...-+ +-.+|.| .+...||=+.+=+-.++++...++|+++++||-+ .-|.+.++.++...|++|++
T Consensus 116 ~~~a~~~~---vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~ 185 (331)
T PRK02102 116 EELAKYSG---VPVWNGL-------TDEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRI 185 (331)
T ss_pred HHHHHhCC---CCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEE
Confidence 33333223 3345642 2346699888844444444457999999999996 34799999999999999999
Q ss_pred EeCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 268 VHSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 268 ~h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
++-. +.++++.+++||+|.+-
T Consensus 186 ~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 231 (331)
T PRK02102 186 CAPKELWPEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTD 231 (331)
T ss_pred ECCcccccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 8632 24667889999999975
No 164
>PRK14031 glutamate dehydrogenase; Provisional
Probab=96.49 E-value=0.014 Score=60.72 Aligned_cols=52 Identities=29% Similarity=0.280 Sum_probs=43.8
Q ss_pred ccccCCHHHHHHHH----HHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 216 LFIPCTPKGCIELL----HRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 216 ~~~PcTa~gvi~lL----~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
+-.+.|..|++..+ ++.+.+++||+|+|.|.|+ ||..++..|.+.||.|+.+
T Consensus 202 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaV 257 (444)
T PRK14031 202 IRPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTM 257 (444)
T ss_pred CCCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 34578999866554 5678999999999999988 5999999999999998874
No 165
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=96.45 E-value=0.05 Score=56.50 Aligned_cols=150 Identities=13% Similarity=0.085 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|.-=--+=..++.++|..+.++.=+.+. ..|-+.+.+.-|+.- +|+|.+--| .|-..+++.+.. .+
T Consensus 137 STRTR~SFE~A~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~v 205 (429)
T PRK11891 137 STRTRVSFGAAFCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------NL 205 (429)
T ss_pred CchhHHHHHHHHHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------CC
Confidence 4444445678899999998876322211 124566666666663 788888754 322223332221 24
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCC---CCCCCEEEEEcCC--cccHHHHHHHhccC-CCeEEEEeCC--
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF---DIKGKRAVVIGRS--NIVGMPAALLLQRE-DATVSIVHSR-- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i---~l~GK~vvVIG~s--~~VGkpla~lL~~~-gAtVtv~h~~-- 271 (371)
-.+|.| + .+.+.||=+.+ ++.+.++.+. .++|++|+++|-+ +-+...++.+|... |++|++++-.
T Consensus 206 PVINAg-----d-g~~~HPtQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~ 279 (429)
T PRK11891 206 PVINGG-----D-GPGEHPSQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTL 279 (429)
T ss_pred CEEECC-----C-CCCCCcHHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCcc
Confidence 455642 1 24567998888 6666666642 4899999999996 34588888887765 9999998632
Q ss_pred -------------------CCCHHhhccCCcEEEEccC
Q 017438 272 -------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 272 -------------------t~~l~~~l~~ADIVIsAvG 290 (371)
+.|+++.+++||+|.+..+
T Consensus 280 ~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~ 317 (429)
T PRK11891 280 EMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRI 317 (429)
T ss_pred ccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCc
Confidence 3577889999999998664
No 166
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.44 E-value=0.0045 Score=56.39 Aligned_cols=76 Identities=28% Similarity=0.434 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC---CCcccC-
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ---PNMVRG- 297 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~---p~~v~~- 297 (371)
|+||+|.|||.|.- |+.-|+.|.+.|.+|+|..+.. .+..|.+++||+|+..++- +.+...
T Consensus 2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~ 80 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEE 80 (165)
T ss_dssp HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHH
T ss_pred cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHH
Confidence 58999999999986 9999999999999999998764 3567899999999999872 222211
Q ss_pred --CCcCCCeEE-EEeeec
Q 017438 298 --SWIKPGAVI-IDVGIN 312 (371)
Q Consensus 298 --d~ik~gavV-IDvgin 312 (371)
..+++|+++ +==|+|
T Consensus 81 I~p~l~~G~~L~fahGfn 98 (165)
T PF07991_consen 81 IAPNLKPGATLVFAHGFN 98 (165)
T ss_dssp HHHHS-TT-EEEESSSHH
T ss_pred HHhhCCCCCEEEeCCcch
Confidence 247888643 333444
No 167
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.42 E-value=0.0045 Score=63.59 Aligned_cols=74 Identities=26% Similarity=0.367 Sum_probs=55.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------HHhh---------------ccCCcEEEEc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------PEEI---------------TRQADIIISA 288 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------l~~~---------------l~~ADIVIsA 288 (371)
++|.|||.|.+ |.|+|..|+++|.+|+.++++... +.+. ..+||+||.+
T Consensus 4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999885 999999999999999999876422 2222 2379999999
Q ss_pred cCCC---------Cccc------CCCcCCCeEEEEeeecC
Q 017438 289 VGQP---------NMVR------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 289 vG~p---------~~v~------~d~ik~gavVIDvgin~ 313 (371)
++.| ..+. ...+++|++||+..+-+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 9986 1221 13468899998877644
No 168
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.42 E-value=0.0042 Score=60.28 Aligned_cols=71 Identities=20% Similarity=0.350 Sum_probs=52.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC----eEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCcc----
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA----TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNMV---- 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA----tVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~v---- 295 (371)
+++.+||.|.+ |.+++..|.+.|. +|++++++. .+..+.+++|||||.++. |..+
T Consensus 3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk-P~~~~~vl 80 (272)
T PRK12491 3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK-PDLYSSVI 80 (272)
T ss_pred CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC-hHHHHHHH
Confidence 47999999986 9999999998773 688887642 234456789999999998 4422
Q ss_pred cC--CCcCCCeEEEEeee
Q 017438 296 RG--SWIKPGAVIIDVGI 311 (371)
Q Consensus 296 ~~--d~ik~gavVIDvgi 311 (371)
.. +.++++.+|||+.-
T Consensus 81 ~~l~~~~~~~~lvISi~A 98 (272)
T PRK12491 81 NQIKDQIKNDVIVVTIAA 98 (272)
T ss_pred HHHHHhhcCCcEEEEeCC
Confidence 11 34677889999863
No 169
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.41 E-value=0.005 Score=60.27 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=55.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhccCCcEEEEccCCCC----cc-cCC---
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITRQADIIISAVGQPN----MV-RGS--- 298 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l~~ADIVIsAvG~p~----~v-~~d--- 298 (371)
+|.+||.|.+ |.+++..|.+.|..|++++++. .+..+..+++|+||.++..+. .+ ..+
T Consensus 2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 5899999986 9999999999999999987642 245566789999999998653 12 222
Q ss_pred -CcCCCeEEEEeeec
Q 017438 299 -WIKPGAVIIDVGIN 312 (371)
Q Consensus 299 -~ik~gavVIDvgin 312 (371)
.+++|.+|||++..
T Consensus 81 ~~~~~g~ivvd~sT~ 95 (292)
T PRK15059 81 KASLKGKTIVDMSSI 95 (292)
T ss_pred ccCCCCCEEEECCCC
Confidence 25789999998854
No 170
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.33 E-value=0.0063 Score=58.77 Aligned_cols=72 Identities=15% Similarity=0.266 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCCc--
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM-- 294 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~~-- 294 (371)
++.++.+||.|.+ |.+++..|++.| ..|++++++. .+..+.++++|+||.++....+
T Consensus 2 ~~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~ 80 (279)
T PRK07679 2 SIQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAE 80 (279)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHH
Confidence 3468999999886 999999999887 6788888742 2334567899999999984332
Q ss_pred -cc--CCCcCCCeEEEEe
Q 017438 295 -VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 295 -v~--~d~ik~gavVIDv 309 (371)
+. .+.++++.+|||+
T Consensus 81 vl~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 81 ALIPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHHHhhcCCCCEEEEE
Confidence 21 1346788999997
No 171
>PLN02527 aspartate carbamoyltransferase
Probab=96.33 E-value=0.082 Score=52.50 Aligned_cols=148 Identities=14% Similarity=0.133 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCC-CC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPE-DT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDG 199 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~-~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDg 199 (371)
|..=--+=..++.++|.++.++.-.. +. ..|-+.+.+.-|+.- +|+|.+--|- |-..+.+.+.. .
T Consensus 50 StRTR~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~~--~~~~~~~a~~~----~--- 118 (306)
T PLN02527 50 STRTRLSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHFE--SGAARRAAATA----E--- 118 (306)
T ss_pred CchhHHHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECCC--hhHHHHHHHhC----C---
Confidence 44444466789999999988775431 11 236677777777764 7899988653 22223332221 2
Q ss_pred cCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC-c-ccHHHHHHHhccC-CCeEEEEeCC----
Q 017438 200 FHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS-N-IVGMPAALLLQRE-DATVSIVHSR---- 271 (371)
Q Consensus 200 l~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s-~-~VGkpla~lL~~~-gAtVtv~h~~---- 271 (371)
+-.+|.|- .+...||=+.+ ++.+.++.| +++|++|+++|-+ + -+.+.++..|... |++|++++-.
T Consensus 119 vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~ 191 (306)
T PLN02527 119 IPVINAGD------GPGQHPTQALLDVYTIQREIG-RLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKM 191 (306)
T ss_pred CCEEECCC------CCCCChHHHHHHHHHHHHHhC-CcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 34456421 23467998888 444445555 6999999999976 3 2588888887776 8999988632
Q ss_pred -----------------CCCHHhhccCCcEEEEcc
Q 017438 272 -----------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----------------t~~l~~~l~~ADIVIsAv 289 (371)
+.|+++.+++||+|.+-.
T Consensus 192 ~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 226 (306)
T PLN02527 192 KDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR 226 (306)
T ss_pred CHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence 257789999999999854
No 172
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=96.31 E-value=0.067 Score=53.00 Aligned_cols=146 Identities=18% Similarity=0.260 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccC
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~ 201 (371)
|..=--+=..++.++|.++.++.-... ...|-+.+.+.-|+.- +++|.+--|-. ..++.+...-+ +-
T Consensus 50 STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~------~~~~~~a~~~~---vP 118 (304)
T TIGR00658 50 STRTRVSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKH------EDVEELAKYAS---VP 118 (304)
T ss_pred CcchHHHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCCh------HHHHHHHHhCC---CC
Confidence 443344557889999999887643211 1135677777777774 78888886522 22233322212 34
Q ss_pred cchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------- 271 (371)
.+|.| .....||=+.+ ++.+.++.| .++|.+|+++|-..-|.+.++.+|...|++|++++-.
T Consensus 119 VINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~ 190 (304)
T TIGR00658 119 VINGL-------TDLFHPCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEPDADIV 190 (304)
T ss_pred EEECC-------CCCCChHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcCCHHHH
Confidence 55653 13466998887 455555555 5999999999996668999999999999999999622
Q ss_pred ----------------CCCHHhhccCCcEEEEc
Q 017438 272 ----------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 ----------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.+++||+|.+-
T Consensus 191 ~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 223 (304)
T TIGR00658 191 KKAQEIAKENGGSVELTHDPVEAVKGADVIYTD 223 (304)
T ss_pred HHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 24677899999999974
No 173
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=96.24 E-value=0.073 Score=54.07 Aligned_cols=155 Identities=17% Similarity=0.157 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCCC---HHHHHHHHHHhcCCCCccEEEEeCCCC---CCCCHHHHHhhCC-cccc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDTS---EQEVLKHISVFNDDPSVHGILVQLPLP---CHIDEQSILNAVS-MEKD 196 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v~---~~el~~~I~~LN~D~~V~GIlVqlPLp---~~i~~~~i~~~I~-p~KD 196 (371)
|..---+=..++.++|.++.++.- .+.+ -|-+.+.++-|+.- +|+|.+-.|-. .|-..+.+.+... --||
T Consensus 53 STRTR~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~~~a~~~~~~~~~ 129 (357)
T TIGR03316 53 STRTRFSFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMREVAKYVQEGYKD 129 (357)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHHHHHHhhhhcccc
Confidence 333334567789999999988763 2221 35577777777764 78999887642 2111122222211 0122
Q ss_pred -c--CccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCC--CCCCCEEEEEcC-------CcccHHHHHHHhccCCC
Q 017438 197 -V--DGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF--DIKGKRAVVIGR-------SNIVGMPAALLLQREDA 263 (371)
Q Consensus 197 -V--Dgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i--~l~GK~vvVIG~-------s~~VGkpla~lL~~~gA 263 (371)
| -.+-.+|.| .+.+.||=+.+ ++.+.++.|. +++|++|+++|. ...|.+.++.++...|+
T Consensus 130 ~~~~s~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~~Sl~~~~~~~G~ 202 (357)
T TIGR03316 130 GVLEQRPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGM 202 (357)
T ss_pred ccccCCCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCC
Confidence 0 013345643 23477998888 5555566663 489999999974 33567788888888999
Q ss_pred eEEEEeCC-------------------------CCCHHhhccCCcEEEEc
Q 017438 264 TVSIVHSR-------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 264 tVtv~h~~-------------------------t~~l~~~l~~ADIVIsA 288 (371)
+|++++-. +.++.+.+++||||.+-
T Consensus 203 ~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 252 (357)
T TIGR03316 203 DVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPK 252 (357)
T ss_pred EEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 99999633 24567888999999866
No 174
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.24 E-value=0.0078 Score=52.85 Aligned_cols=53 Identities=26% Similarity=0.481 Sum_probs=43.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC------------------------CCHHhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT------------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t------------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
||+|||+++.||..++.+|...+. ++.+++... .+.++.+++|||||.+.|.|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 799999966679999999998873 688887651 24568899999999999976
No 175
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.20 E-value=0.01 Score=58.03 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=54.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccC---CcEEEEccCCCCc----cc--
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQ---ADIIISAVGQPNM----VR-- 296 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~---ADIVIsAvG~p~~----v~-- 296 (371)
+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+..+. +|+||++++.... +.
T Consensus 2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l 80 (301)
T PRK09599 2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDEL 80 (301)
T ss_pred EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHH
Confidence 6899999886 9999999999999999998863 244455554 6999999886532 11
Q ss_pred CCCcCCCeEEEEeeec
Q 017438 297 GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 ~d~ik~gavVIDvgin 312 (371)
.+.+++|.++||.+..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (301)
T PRK09599 81 APLLSPGDIVIDGGNS 96 (301)
T ss_pred HhhCCCCCEEEeCCCC
Confidence 1346788999998654
No 176
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.19 E-value=0.0083 Score=57.05 Aligned_cols=68 Identities=24% Similarity=0.386 Sum_probs=50.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC----eEEEE-eCCC--------------CCHHhhccCCcEEEEccCCCCccc----
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA----TVSIV-HSRT--------------KNPEEITRQADIIISAVGQPNMVR---- 296 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA----tVtv~-h~~t--------------~~l~~~l~~ADIVIsAvG~p~~v~---- 296 (371)
+|.+||.|.+ |.+++..|.+.|. +|+++ +++. .+..+.++++|+||.++ .|..+.
T Consensus 2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v-~~~~~~~vl~ 79 (266)
T PLN02688 2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV-KPQVVKDVLT 79 (266)
T ss_pred eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE-CcHHHHHHHH
Confidence 5899999886 9999999999887 88888 6542 34556678999999999 454221
Q ss_pred --CCCcCCCeEEEEe
Q 017438 297 --GSWIKPGAVIIDV 309 (371)
Q Consensus 297 --~d~ik~gavVIDv 309 (371)
...++++.+||.+
T Consensus 80 ~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 80 ELRPLLSKDKLLVSV 94 (266)
T ss_pred HHHhhcCCCCEEEEe
Confidence 1245677777765
No 177
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.19 E-value=0.0079 Score=58.42 Aligned_cols=74 Identities=26% Similarity=0.433 Sum_probs=55.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------CCHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------~~l~~~l~~ADIVIsAvG 290 (371)
.+|.|||.|.+ |.+++..|++.|.+|+++++.. .+..+.++++|+||.++.
T Consensus 2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 37999999885 9999999999999999997641 134456789999999998
Q ss_pred CCCc---cc--CCCcCCCeEEEEe--eecC
Q 017438 291 QPNM---VR--GSWIKPGAVIIDV--GINP 313 (371)
Q Consensus 291 ~p~~---v~--~d~ik~gavVIDv--gin~ 313 (371)
...+ +. ..+++++++|||+ |+.+
T Consensus 81 ~~~~~~v~~~l~~~~~~~~~vi~~~ngv~~ 110 (325)
T PRK00094 81 SQALREVLKQLKPLLPPDAPIVWATKGIEP 110 (325)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence 6431 11 1356789999999 5543
No 178
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=96.17 E-value=0.033 Score=59.42 Aligned_cols=166 Identities=19% Similarity=0.196 Sum_probs=109.1
Q ss_pred HHHHHHHHHc-CCe---EEEEeCCCCCC--------------------------HHHHHHHHHHhcCCCCccEEEEeCCC
Q 017438 129 RNKKKACQSV-GIN---SFEVHLPEDTS--------------------------EQEVLKHISVFNDDPSVHGILVQLPL 178 (371)
Q Consensus 129 ~~k~k~~~~~-GI~---~~~~~lp~~v~--------------------------~~el~~~I~~LN~D~~V~GIlVqlPL 178 (371)
..|.-.+..+ ||+ +.-+.|+..++ -+|+.++++++- |+ .+||.==
T Consensus 175 ~GKl~Ly~a~aGI~P~~~lPI~LDvGTnN~~LL~DPlYlG~r~~R~~g~eY~~f~defv~av~~~~--P~---~~Iq~ED 249 (559)
T PTZ00317 175 IGKLSLYVAGGGINPSRVLPVVLDVGTNNEKLLNDPLYLGLREKRLDDDEYYELLDEFMEAVSSRW--PN---AVVQFED 249 (559)
T ss_pred ccHHHHHHhhcCCChhhccceEEecCCChhhhccCcccccccCCCCChhhHHHHHHHHHHHHHHhC--CC---eEEehhh
Confidence 4566666666 588 66666654222 366677776664 44 2444421
Q ss_pred CCCCCHHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHh
Q 017438 179 PCHIDEQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLL 258 (371)
Q Consensus 179 p~~i~~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL 258 (371)
...-+.-++++... +++-. +| ++..+-.-++-.|++..++-.+.+|+..+++++|+|.+ |..+|.+|
T Consensus 250 f~~~naf~iL~kyr--~~i~~---Fn-------DDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsA-giGia~ll 316 (559)
T PTZ00317 250 FSNNHCFDLLERYQ--NKYRC---FN-------DDIQGTGAVIAAGFLNALKLSGVPPEEQRIVFFGAGSA-AIGVANNI 316 (559)
T ss_pred cCCccHHHHHHHhc--cCCCE---ec-------ccchhHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHH
Confidence 11223333444332 12222 22 22334445677889999999999999999999999987 99999888
Q ss_pred cc----CCC-------eEEEEeCC-----------------------------CCCHHhhccCC--cEEEEccCCCCccc
Q 017438 259 QR----EDA-------TVSIVHSR-----------------------------TKNPEEITRQA--DIIISAVGQPNMVR 296 (371)
Q Consensus 259 ~~----~gA-------tVtv~h~~-----------------------------t~~l~~~l~~A--DIVIsAvG~p~~v~ 296 (371)
.. .|. .+++++++ ..+|.+.++.+ |++|.+.+.|+.++
T Consensus 317 ~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft 396 (559)
T PTZ00317 317 ADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFT 396 (559)
T ss_pred HHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCC
Confidence 73 565 68887643 12577888888 99999999899999
Q ss_pred CCCcC------CCeEEEEeeecC
Q 017438 297 GSWIK------PGAVIIDVGINP 313 (371)
Q Consensus 297 ~d~ik------~gavVIDvgin~ 313 (371)
+|+|+ +.-+|+=+. ||
T Consensus 397 ~evv~~Ma~~~~rPIIFaLS-NP 418 (559)
T PTZ00317 397 EEVVKTMASNVERPIIFPLS-NP 418 (559)
T ss_pred HHHHHHHHhcCCCCEEEECC-CC
Confidence 88875 345666555 44
No 179
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.15 E-value=0.009 Score=61.88 Aligned_cols=71 Identities=21% Similarity=0.367 Sum_probs=55.1
Q ss_pred EEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCC---------------CCHHhhccCCcEEEEccCCCC---ccc--CC
Q 017438 240 RAVVIG-RSNIVGMPAALLLQREDATVSIVHSRT---------------KNPEEITRQADIIISAVGQPN---MVR--GS 298 (371)
Q Consensus 240 ~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~---~v~--~d 298 (371)
++.||| .|. +|..++..|.+.|..|+++.++. .+..+.+.++|+||.+++... ++. ..
T Consensus 2 kI~IIGG~G~-mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGG-LGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVAP 80 (437)
T ss_pred EEEEEecCCH-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHHh
Confidence 689998 465 59999999999999999987653 244566789999999998432 222 23
Q ss_pred CcCCCeEEEEeee
Q 017438 299 WIKPGAVIIDVGI 311 (371)
Q Consensus 299 ~ik~gavVIDvgi 311 (371)
+++++++|+|++.
T Consensus 81 ~l~~~~iViDvsS 93 (437)
T PRK08655 81 HVKEGSLLMDVTS 93 (437)
T ss_pred hCCCCCEEEEccc
Confidence 5789999999995
No 180
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.13 E-value=0.0084 Score=59.10 Aligned_cols=73 Identities=22% Similarity=0.272 Sum_probs=56.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------CCHHhhccCCcEEEEcc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------KNPEEITRQADIIISAV 289 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------~~l~~~l~~ADIVIsAv 289 (371)
..+|.|||.|.+ |.+++..|.+.|..|++++++. .++++.++++|+||.++
T Consensus 4 ~m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 347999999886 9999999999999999998741 14456678899999999
Q ss_pred CCCCccc-CCCcCCCeEEEEeee
Q 017438 290 GQPNMVR-GSWIKPGAVIIDVGI 311 (371)
Q Consensus 290 G~p~~v~-~d~ik~gavVIDvgi 311 (371)
....+-. -+.++++.++||+..
T Consensus 83 ~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 83 PSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred chHHHHHHHHhcCcCCEEEEEee
Confidence 8654311 134678899999864
No 181
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.12 E-value=0.011 Score=56.93 Aligned_cols=70 Identities=24% Similarity=0.321 Sum_probs=51.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC---------------CCHHhhccCCcEEEEccCCCCc---cc--C
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT---------------KNPEEITRQADIIISAVGQPNM---VR--G 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~p~~---v~--~ 297 (371)
+|.|||.|.+ |.+++..|.+.|. +|++++++. .+..+. .++|+||.+++.... +. .
T Consensus 2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~-~~aD~Vilavp~~~~~~~~~~l~ 79 (275)
T PRK08507 2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEEL-KKCDVIFLAIPVDAIIEILPKLL 79 (275)
T ss_pred EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHH-hcCCEEEEeCcHHHHHHHHHHHh
Confidence 6899999885 9999999998885 688777642 234443 459999999985432 21 1
Q ss_pred CCcCCCeEEEEeeec
Q 017438 298 SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 d~ik~gavVIDvgin 312 (371)
. ++++++|+|+|..
T Consensus 80 ~-l~~~~iv~d~gs~ 93 (275)
T PRK08507 80 D-IKENTTIIDLGST 93 (275)
T ss_pred c-cCCCCEEEECccc
Confidence 2 7889999999864
No 182
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.11 E-value=0.03 Score=57.54 Aligned_cols=94 Identities=26% Similarity=0.311 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHhC--CCCCCCEEEEEcC----------------CcccHHHHHHHhccCCCeEEEEeCCCC--------
Q 017438 220 CTPKGCIELLHRYG--FDIKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK-------- 273 (371)
Q Consensus 220 cTa~gvi~lL~~~~--i~l~GK~vvVIG~----------------s~~VGkpla~lL~~~gAtVtv~h~~t~-------- 273 (371)
..|.-+++.++++- -+++||+|+|-|+ ||-.|+.+|..|..+||+|+++++...
T Consensus 168 ~~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~ 247 (399)
T PRK05579 168 AEPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVK 247 (399)
T ss_pred CCHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcE
Confidence 34556655555432 4689999999998 775699999999999999999875421
Q ss_pred --------CH----HhhccCCcEEEEccCCCCcc----cCCCcCCC--eEEEEeeecC
Q 017438 274 --------NP----EEITRQADIIISAVGQPNMV----RGSWIKPG--AVIIDVGINP 313 (371)
Q Consensus 274 --------~l----~~~l~~ADIVIsAvG~p~~v----~~d~ik~g--avVIDvgin~ 313 (371)
++ .+...+.|++|.++|...+- ...-+|++ ...+.+--||
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~p 305 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNP 305 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCc
Confidence 11 13346789999998865442 22335543 3566766665
No 183
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.11 E-value=0.0082 Score=58.73 Aligned_cols=72 Identities=14% Similarity=0.174 Sum_probs=54.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCH---HhhccCCcEEEEccCCCC---ccc--C
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNP---EEITRQADIIISAVGQPN---MVR--G 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l---~~~l~~ADIVIsAvG~p~---~v~--~ 297 (371)
+|.|||.|.+ |.+++..|.+.|.+|++.+++. .++ .+.+.++|+||.+++... ++. .
T Consensus 2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLEELA 80 (298)
T ss_pred EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHHHHH
Confidence 6899999886 9999999999999999998763 122 234567899999988642 121 1
Q ss_pred CCcCCCeEEEEeeec
Q 017438 298 SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 d~ik~gavVIDvgin 312 (371)
..+++|.+|||++..
T Consensus 81 ~~l~~g~ivid~st~ 95 (298)
T TIGR00872 81 PTLEKGDIVIDGGNS 95 (298)
T ss_pred hhCCCCCEEEECCCC
Confidence 346889999998754
No 184
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.10 E-value=0.01 Score=59.66 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC---cccC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN---MVRG 297 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~---~v~~ 297 (371)
.++||+|.|||.|.+ |.++|..|...|.+|.+..+.. .+..+.+++||+|+.+++... ++..
T Consensus 14 ~L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~ 92 (330)
T PRK05479 14 LIKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEE 92 (330)
T ss_pred hhCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHH
Confidence 368999999999986 9999999999999998876541 256678899999999998322 2311
Q ss_pred ---CCcCCCeEE
Q 017438 298 ---SWIKPGAVI 306 (371)
Q Consensus 298 ---d~ik~gavV 306 (371)
..+++|++|
T Consensus 93 ~I~~~Lk~g~iL 104 (330)
T PRK05479 93 EIEPNLKEGAAL 104 (330)
T ss_pred HHHhcCCCCCEE
Confidence 246778766
No 185
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.09 E-value=0.011 Score=60.41 Aligned_cols=37 Identities=27% Similarity=0.534 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|+|+|+|.|. .|.++|..|+++|++|+++.+..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999999 59999999999999999998763
No 186
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=96.07 E-value=0.11 Score=51.58 Aligned_cols=147 Identities=16% Similarity=0.202 Sum_probs=98.7
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
.|..=--+=..++.++|.++.++.-... ...|.+.+.+.-|+.- +|+|.+--| .+ ..++.+... -.+
T Consensus 53 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~--~~----~~~~~~a~~---~~v 121 (304)
T PRK00779 53 PSTRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTF--EH----ETLEELAEY---STV 121 (304)
T ss_pred CCchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCC--Ch----hHHHHHHHh---CCC
Confidence 3444444668899999999887643210 1135577777777764 778887755 32 233333221 224
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
-.+|.|. +...||=+.+ ++.+.++.| .++|++++++|-.+-|.+.++.+|...|++|++|+-.
T Consensus 122 PVINag~-------~~~HPtQaL~Dl~Ti~e~~g-~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~ 193 (304)
T PRK00779 122 PVINGLT-------DLSHPCQILADLLTIYEHRG-SLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEI 193 (304)
T ss_pred CEEeCCC-------CCCChHHHHHHHHHHHHHhC-CcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHH
Confidence 5667642 2356887777 444444554 6999999999995567999999999999999998632
Q ss_pred --------------CCCHHhhccCCcEEEEc
Q 017438 272 --------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 272 --------------t~~l~~~l~~ADIVIsA 288 (371)
+.++++.+++||+|.+-
T Consensus 194 ~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 224 (304)
T PRK00779 194 VEKIAKETGASIEVTHDPKEAVKGADVVYTD 224 (304)
T ss_pred HHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 24677889999999975
No 187
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.00 E-value=0.014 Score=57.33 Aligned_cols=53 Identities=23% Similarity=0.430 Sum_probs=42.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCCC------------------------CHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRTK------------------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t~------------------------~l~~~l~~ADIVIsAvG~p 292 (371)
++|+|||+|+ ||..++..|+.+| .+|++++++.. .-.+.+++||+||.++|.|
T Consensus 1 ~kI~IIGaG~-vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGAGH-VGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 4799999988 5999999999998 37999986421 1124578999999999976
No 188
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.00 E-value=0.012 Score=57.00 Aligned_cols=72 Identities=17% Similarity=0.271 Sum_probs=54.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------------------------------CCCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------------------------TKNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------------------------------t~~l~~~l~ 280 (371)
++|.|||.|.+ |.++|..|++.|.+|++++++ +.++++.++
T Consensus 2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999999875 999999999999999998754 234556789
Q ss_pred CCcEEEEccCCCCccc-------CCCcCCCeEE-EEeee
Q 017438 281 QADIIISAVGQPNMVR-------GSWIKPGAVI-IDVGI 311 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~-------~d~ik~gavV-IDvgi 311 (371)
+||+||.+++...-++ .+.+++++++ +|...
T Consensus 81 ~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt 119 (288)
T PRK09260 81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTST 119 (288)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 9999999998543111 2356778755 56654
No 189
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.98 E-value=0.014 Score=59.57 Aligned_cols=123 Identities=18% Similarity=0.263 Sum_probs=68.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---HHhhccCCcEEEEccCCCCcccCCCcC--CCeEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PEEITRQADIIISAVGQPNMVRGSWIK--PGAVIIDV 309 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---l~~~l~~ADIVIsAvG~p~~v~~d~ik--~gavVIDv 309 (371)
+++||+++|+|.|+ .|+++|..|+++|++|+++.++... ..+.++...+-+. .|. ...+.+. ...+|.--
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~-~~~---~~~~~~~~~~d~vV~s~ 76 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI-CGS---HPLELLDEDFDLMVKNP 76 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE-eCC---CCHHHhcCcCCEEEECC
Confidence 36899999999999 5999999999999999999765321 1122222121111 110 0001111 22344444
Q ss_pred eecCCCCCC----CCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 310 GINPVEDAK----SPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 310 gin~~~~~~----~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
|+.+.. +- ...|-+++++.++...... .-+.-|-|-.|.-|+..|+.++++.+
T Consensus 77 gi~~~~-~~~~~a~~~~i~v~~~~el~~~~~~-~~~I~VTGT~GKTTTt~ll~~iL~~~ 133 (447)
T PRK02472 77 GIPYTN-PMVEKALEKGIPIITEVELAYLISE-APIIGITGSNGKTTTTTLIGEMLKAG 133 (447)
T ss_pred CCCCCC-HHHHHHHHCCCcEEeHHHHHHHhcC-CCEEEEeCCCchHHHHHHHHHHHHHC
Confidence 443320 00 0123356777665221111 11223668999999999999998764
No 190
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.97 E-value=0.018 Score=55.92 Aligned_cols=54 Identities=28% Similarity=0.258 Sum_probs=44.8
Q ss_pred ccccCCHHHHHHHHH----HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeC
Q 017438 216 LFIPCTPKGCIELLH----RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHS 270 (371)
Q Consensus 216 ~~~PcTa~gvi~lL~----~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~ 270 (371)
+--+.|..|++..++ +.+.+++|++|+|-|.|+ ||..++.+|.+.|+.|+ |+.+
T Consensus 12 gR~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~e~GakvvaVsD~ 70 (254)
T cd05313 12 IRPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGN-VAQYAAEKLLELGAKVVTLSDS 70 (254)
T ss_pred CCCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 445788888666554 568899999999999998 59999999999999877 7764
No 191
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=95.95 E-value=0.18 Score=50.10 Aligned_cols=145 Identities=15% Similarity=0.193 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCcc
Q 017438 124 SATYVRNKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGF 200 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl 200 (371)
|..=--+=..++.++|.++.++. +.+. .-|.+.+.++-|..- +|+|.+--| .| ..++.+...-+ +
T Consensus 49 STRTR~SFE~A~~~LGg~~i~l~-~~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~--~~----~~~~~~a~~~~---v 116 (302)
T PRK14805 49 SLRTRVSFDIGINKLGGHCLYLD-QQNGALGKRESVADFAANLSCW--ADAIVARVF--SH----STIEQLAEHGS---V 116 (302)
T ss_pred CchHHHHHHHHHHHcCCcEEECC-CCcCcCCCCcCHHHHHHHHHHh--CCEEEEeCC--Ch----hHHHHHHHhCC---C
Confidence 44434456789999999988764 2221 235677777777764 889988765 32 23333322222 4
Q ss_pred CcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------
Q 017438 201 HPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------- 271 (371)
Q Consensus 201 ~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------- 271 (371)
-.+|.| .+...||=+.+ ++.+.++.| +++|++|+++|-+.-|.+.++.++...|++|++|+-.
T Consensus 117 PVINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~ 188 (302)
T PRK14805 117 PVINAL-------CDLYHPCQALADFLTLAEQFG-DVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQI 188 (302)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhC-CcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHHH
Confidence 556652 22467998888 444445554 7999999999998888999999999999999999632
Q ss_pred -----------------CCCHHhhccCCcEEEEcc
Q 017438 272 -----------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----------------t~~l~~~l~~ADIVIsAv 289 (371)
+.++ +.++.||+|.+-+
T Consensus 189 ~~~a~~~~~~~g~~~~~~~d~-~a~~~aDvvy~~~ 222 (302)
T PRK14805 189 VAEAQELAAKSGGKLVLTSDI-EAIEGHDAIYTDT 222 (302)
T ss_pred HHHHHHHHHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence 2333 4588999998733
No 192
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.94 E-value=0.0086 Score=52.20 Aligned_cols=72 Identities=29% Similarity=0.389 Sum_probs=47.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC-------c
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN-------M 294 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~-------~ 294 (371)
--+|.|||+|+ ||..++..|.+.|..|.-+.+++ .++.+.+++||++|-+++--. +
T Consensus 10 ~l~I~iIGaGr-VG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGR-VGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQL 88 (127)
T ss_dssp --EEEEECTSC-CCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHH
T ss_pred ccEEEEECCCH-HHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHH
Confidence 35899999999 59999999999999988876553 355678999999999998532 1
Q ss_pred ccCCCcCCCeEEEEee
Q 017438 295 VRGSWIKPGAVIIDVG 310 (371)
Q Consensus 295 v~~d~ik~gavVIDvg 310 (371)
-....+++|.+|+=+.
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 2223467888887654
No 193
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.92 E-value=0.018 Score=58.82 Aligned_cols=72 Identities=29% Similarity=0.404 Sum_probs=54.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------------------------CHHhhccCCcEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------------------NPEEITRQADII 285 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------------------------~l~~~l~~ADIV 285 (371)
+|.|||.|.+ |.++|..|.+.|.+|++++++.. ++.+.++++|+|
T Consensus 2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 6899999885 99999999999999999976421 234457889999
Q ss_pred EEccCCCCc---------cc------CCCcCCCeEEEEeeec
Q 017438 286 ISAVGQPNM---------VR------GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 286 IsAvG~p~~---------v~------~d~ik~gavVIDvgin 312 (371)
|.+++.|.- +. ...+++|.+|||.+.-
T Consensus 81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv 122 (411)
T TIGR03026 81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV 122 (411)
T ss_pred EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence 999997631 11 1235788999988743
No 194
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.91 E-value=0.0098 Score=56.64 Aligned_cols=60 Identities=13% Similarity=0.236 Sum_probs=45.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-CCH-----------------HhhccCCcEEEEccCCCCc
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-KNP-----------------EEITRQADIIISAVGQPNM 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~~l-----------------~~~l~~ADIVIsAvG~p~~ 294 (371)
++++|++|+|||.|.+ +.-=+..|++.||.|||+.-.- .++ .+.+..+++||.||+.+.+
T Consensus 21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~v 98 (223)
T PRK05562 21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEKL 98 (223)
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHHH
Confidence 5677999999999985 7666778888999999985432 111 1347789999999987653
No 195
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=95.90 E-value=0.15 Score=51.51 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=92.8
Q ss_pred HHHHHHHHcCCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchhh
Q 017438 130 NKKKACQSVGINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNIG 206 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~G 206 (371)
+=..++.++|.++.++.=+++. ..|-+.+.++-|+.- +|+|.+--|-. -...++.+. -. +-.+|.|
T Consensus 61 SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~~~--~~~~~~a~~----~~---vPVINa~ 129 (338)
T PRK08192 61 SFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHPDA--GSVKEFAEG----SR---VPVINGG 129 (338)
T ss_pred HHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCCch--hHHHHHHHh----CC---CCEEECC
Confidence 5578899999998764212221 235677777777764 78999886532 222222222 12 3455642
Q ss_pred hhccCCCccccccCCHHH-HHHHHHHh---CCCCCCCEEEEEcCC--cccHHHHHHHhcc-CCCeEEEEeCC--------
Q 017438 207 RLAMRGREPLFIPCTPKG-CIELLHRY---GFDIKGKRAVVIGRS--NIVGMPAALLLQR-EDATVSIVHSR-------- 271 (371)
Q Consensus 207 ~l~~g~~~~~~~PcTa~g-vi~lL~~~---~i~l~GK~vvVIG~s--~~VGkpla~lL~~-~gAtVtv~h~~-------- 271 (371)
. .+.+.||=+.+ ++.+.|+. |-+++|++|+++|-+ +-+...++..|.. .|++|++++-.
T Consensus 130 ~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~ 203 (338)
T PRK08192 130 D------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYV 203 (338)
T ss_pred C------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHH
Confidence 1 13567998888 55555554 347999999999995 3357777766553 48999888632
Q ss_pred -------------CCCHHhhccCCcEEEEccC
Q 017438 272 -------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 272 -------------t~~l~~~l~~ADIVIsAvG 290 (371)
+.|+++.+++||||.+..+
T Consensus 204 ~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~~ 235 (338)
T PRK08192 204 ISDIENAGHKITITDQLEGNLDKADILYLTRI 235 (338)
T ss_pred HHHHHHcCCeEEEEcCHHHHHccCCEEEEcCc
Confidence 2577899999999998543
No 196
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=95.85 E-value=0.022 Score=57.19 Aligned_cols=74 Identities=22% Similarity=0.425 Sum_probs=55.5
Q ss_pred CCEEEEEcCCcccHHHHHHHhccC-C-CeEEEEeCC---------------------CCCHHhhccCCcEEEEccCCC-C
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRE-D-ATVSIVHSR---------------------TKNPEEITRQADIIISAVGQP-N 293 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~-g-AtVtv~h~~---------------------t~~l~~~l~~ADIVIsAvG~p-~ 293 (371)
-+...|||+|.. ++.-...+... + -+|.|..++ ..+.++.++.|||||++|... .
T Consensus 130 a~~laiIGaG~q-A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P 208 (330)
T COG2423 130 ASTLAIIGAGAQ-ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP 208 (330)
T ss_pred CcEEEEECCcHH-HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC
Confidence 467788888764 76655555432 2 367776654 246788999999999999853 4
Q ss_pred cccCCCcCCCeEEEEeeec
Q 017438 294 MVRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin 312 (371)
+++.+|++||+.|.=+|-+
T Consensus 209 il~~~~l~~G~hI~aiGad 227 (330)
T COG2423 209 VLKAEWLKPGTHINAIGAD 227 (330)
T ss_pred eecHhhcCCCcEEEecCCC
Confidence 7899999999999999965
No 197
>PLN02712 arogenate dehydrogenase
Probab=95.80 E-value=0.014 Score=63.73 Aligned_cols=76 Identities=20% Similarity=0.268 Sum_probs=56.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------CCHHhhc-cCCcEEEEccCCCC---ccc-
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEIT-RQADIIISAVGQPN---MVR- 296 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------~~l~~~l-~~ADIVIsAvG~p~---~v~- 296 (371)
+-+.+++.|||.|.+ |..++..|.+.|.+|+++++.. .++.+.+ .+||+||.+++... ++.
T Consensus 49 ~~~~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~ 127 (667)
T PLN02712 49 NTTQLKIAIIGFGNY-GQFLAKTLISQGHTVLAHSRSDHSLAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKS 127 (667)
T ss_pred cCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHh
Confidence 345578999999885 9999999999999999887652 2344434 56999999998422 232
Q ss_pred --CCCcCCCeEEEEeee
Q 017438 297 --GSWIKPGAVIIDVGI 311 (371)
Q Consensus 297 --~d~ik~gavVIDvgi 311 (371)
...+++|++|+|++.
T Consensus 128 l~~~~l~~g~iVvDv~S 144 (667)
T PLN02712 128 LPLQRLKRNTLFVDVLS 144 (667)
T ss_pred hhhhcCCCCeEEEECCC
Confidence 234789999999983
No 198
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.77 E-value=0.03 Score=55.87 Aligned_cols=90 Identities=26% Similarity=0.386 Sum_probs=66.5
Q ss_pred HHHHHHHHH----------hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------------
Q 017438 223 KGCIELLHR----------YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------- 271 (371)
Q Consensus 223 ~gvi~lL~~----------~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------------- 271 (371)
.+++..+.+ .+....+.+++++|.|-+ |-.++..-...|+-||-..-+
T Consensus 139 ~aVi~Aa~a~~rffpm~~TAagtv~pA~vlv~G~Gva-gl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee 217 (356)
T COG3288 139 IAVIGAALAYGRFFPMQITAAGTVSPAKVLVIGAGVA-GLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEE 217 (356)
T ss_pred HHHHHHHHHhhhcccchhhhcccccchhhhhhhHHHH-HHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccc
Confidence 667777777 345778889999999765 887777666778776654311
Q ss_pred ---------C--------CCHHhhccCCcEEEEcc---C--CCCcccCCCc---CCCeEEEEeeecC
Q 017438 272 ---------T--------KNPEEITRQADIIISAV---G--QPNMVRGSWI---KPGAVIIDVGINP 313 (371)
Q Consensus 272 ---------t--------~~l~~~l~~ADIVIsAv---G--~p~~v~~d~i---k~gavVIDvgin~ 313 (371)
+ +-+.+++++.||||+.. | .|.+|+.+|+ |||++|+|+....
T Consensus 218 ~~gGYAk~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~ 284 (356)
T COG3288 218 SAGGYAKEMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAET 284 (356)
T ss_pred cCCCccccCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhc
Confidence 0 12347899999999877 3 3567999886 9999999998653
No 199
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=95.76 E-value=0.021 Score=54.26 Aligned_cols=53 Identities=28% Similarity=0.372 Sum_probs=44.3
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeC
Q 017438 217 FIPCTPKGCIELLH----RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHS 270 (371)
Q Consensus 217 ~~PcTa~gvi~lL~----~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~ 270 (371)
..|.|..|+...++ +.+.+++|++|+|.|.|+ ||+.++.+|.++|++|+ |+.+
T Consensus 6 ~~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 6 REEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 34788888766655 557789999999999988 59999999999999987 7765
No 200
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.75 E-value=0.15 Score=52.41 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=55.7
Q ss_pred CCCCCCCEEEEEcCC---------cccHHHHHHHhccCC-CeEEEEeCC-------------CCCHHhhccCCcEEEEcc
Q 017438 233 GFDIKGKRAVVIGRS---------NIVGMPAALLLQRED-ATVSIVHSR-------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~g-AtVtv~h~~-------------t~~l~~~l~~ADIVIsAv 289 (371)
+.+++||+|.|+|.+ +.-...++..|.++| +.|.+..-. ..++++.++.||+||..|
T Consensus 315 ~~~~~~~~v~vlGlafK~~t~d~r~Sp~~~l~~~L~~~gg~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 394 (415)
T PRK11064 315 DKRASEVKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLDGLVTLVSLDEALATADVLVMLV 394 (415)
T ss_pred ccCcCCCEEEEEeeEECCCCcchhhChHHHHHHHHHhcCCcEEEEECCCCCchhhhccCceeeCCHHHHHhCCCEEEECC
Confidence 667899999999953 223678899999996 999885422 135778899999999999
Q ss_pred CCCCcccCCC--cCCCeEEEE
Q 017438 290 GQPNMVRGSW--IKPGAVIID 308 (371)
Q Consensus 290 G~p~~v~~d~--ik~gavVID 308 (371)
..+.|-..+| ++. -+|||
T Consensus 395 ~~~~~~~~~~~~~~~-~~v~D 414 (415)
T PRK11064 395 DHSQFKAINGDNVHQ-QWVVD 414 (415)
T ss_pred CCHHhccCCHHHhCC-CEEEe
Confidence 9887743333 443 37777
No 201
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.74 E-value=0.018 Score=57.38 Aligned_cols=55 Identities=29% Similarity=0.389 Sum_probs=44.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~ 291 (371)
|+||++.|||.|.+ |.+++..|.+.|.+|++..+.. .+..+.+++||+||.+++-
T Consensus 1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp 69 (314)
T TIGR00465 1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPD 69 (314)
T ss_pred CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCc
Confidence 58999999999996 9999999999998877654321 1355678999999999984
No 202
>PRK09414 glutamate dehydrogenase; Provisional
Probab=95.66 E-value=0.059 Score=56.25 Aligned_cols=51 Identities=29% Similarity=0.256 Sum_probs=43.0
Q ss_pred cccCCHHHHHHHHH----HhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 217 FIPCTPKGCIELLH----RYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 217 ~~PcTa~gvi~lL~----~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
-.+.|..|+...++ +.+.+++|++|+|.|.|+ ||..+|.+|.+.|++|+.+
T Consensus 207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVav 261 (445)
T PRK09414 207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTC 261 (445)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 44788888665554 568899999999999988 5999999999999998766
No 203
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.015 Score=53.85 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~ 43 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV 43 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999988899999999999999999887653
No 204
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.65 E-value=0.016 Score=54.10 Aligned_cols=69 Identities=22% Similarity=0.332 Sum_probs=49.9
Q ss_pred EEEEEc-CCcccHHHHHHHhccCCCeEEEEeCCCC-------------------------CHHhhccCCcEEEEccCCCC
Q 017438 240 RAVVIG-RSNIVGMPAALLLQREDATVSIVHSRTK-------------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 240 ~vvVIG-~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
++.||| .|. +|..++..|.+.|.+|++..++.. +..+.+.++|+||.++....
T Consensus 2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~ 80 (219)
T TIGR01915 2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDH 80 (219)
T ss_pred EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHH
Confidence 689998 666 599999999999999998876421 23456789999999998543
Q ss_pred c---cc--CCCcCCCeEEEEee
Q 017438 294 M---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 294 ~---v~--~d~ik~gavVIDvg 310 (371)
+ +. ...++ +.+|||+.
T Consensus 81 ~~~~l~~l~~~l~-~~vvI~~~ 101 (219)
T TIGR01915 81 VLKTLESLRDELS-GKLVISPV 101 (219)
T ss_pred HHHHHHHHHHhcc-CCEEEEec
Confidence 2 21 12233 47999984
No 205
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.62 E-value=0.013 Score=57.00 Aligned_cols=72 Identities=25% Similarity=0.332 Sum_probs=51.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH-------------------------------------HhhccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP-------------------------------------EEITRQ 281 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l-------------------------------------~~~l~~ 281 (371)
|+|.|||.|.+ |.++|..|+..|.+|++++++...+ .+.+++
T Consensus 5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (295)
T PLN02545 5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRD 83 (295)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCC
Confidence 68999999886 9999999999999999997643111 135788
Q ss_pred CcEEEEccCC-CC----ccc--CCCcCCCeEEE-Eeee
Q 017438 282 ADIIISAVGQ-PN----MVR--GSWIKPGAVII-DVGI 311 (371)
Q Consensus 282 ADIVIsAvG~-p~----~v~--~d~ik~gavVI-Dvgi 311 (371)
||+||.++.- |. ++. .+.++++++++ |.+.
T Consensus 84 aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~ 121 (295)
T PLN02545 84 ADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS 121 (295)
T ss_pred CCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 9999999873 22 111 13567787775 5543
No 206
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.60 E-value=0.019 Score=60.12 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=53.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------CCHHhhcc---CCcEEEEccCCCCc-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEITR---QADIIISAVGQPNM- 294 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------~~l~~~l~---~ADIVIsAvG~p~~- 294 (371)
.++.|||.|.+ |.++|..|+++|.+|++++++. .++++.+. ++|+||..+..+..
T Consensus 2 ~~IgvIGLG~M-G~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v 80 (470)
T PTZ00142 2 SDIGLIGLAVM-GQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV 80 (470)
T ss_pred CEEEEEeEhHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence 36899999886 9999999999999999998763 23444444 57988866554332
Q ss_pred ---cc--CCCcCCCeEEEEeeec
Q 017438 295 ---VR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 295 ---v~--~d~ik~gavVIDvgin 312 (371)
+. ...+++|.+|||.|..
T Consensus 81 ~~vi~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 81 DETIDNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHHHHHHhhCCCCCEEEECCCC
Confidence 21 1346889999999854
No 207
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.56 E-value=0.018 Score=60.70 Aligned_cols=72 Identities=25% Similarity=0.386 Sum_probs=55.6
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhcc---CCcEEEEccCCCCcc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITR---QADIIISAVGQPNMV 295 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~---~ADIVIsAvG~p~~v 295 (371)
+|-+||-|.+ |.++|..|+++|.+|+++||+.. ++++.++ ++|+||+.+..+..+
T Consensus 8 ~IG~IGLG~M-G~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 8 RIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CEEEEeeHHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 6899999886 99999999999999999998631 2334444 499999988765532
Q ss_pred c------CCCcCCCeEEEEeeec
Q 017438 296 R------GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 296 ~------~d~ik~gavVIDvgin 312 (371)
+ ...+++|.++||.+..
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~ 109 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNE 109 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCC
Confidence 1 1346889999999976
No 208
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.55 E-value=0.0081 Score=50.95 Aligned_cols=74 Identities=23% Similarity=0.305 Sum_probs=49.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCC-Ce-EEEEeCCC---CCH-------------------HhhccCCcEEEEccCCC--C
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED-AT-VSIVHSRT---KNP-------------------EEITRQADIIISAVGQP--N 293 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g-At-Vtv~h~~t---~~l-------------------~~~l~~ADIVIsAvG~p--~ 293 (371)
||.|||+.|.+|+-+..+|.++- .+ +.++.++. +.+ .+.+.++|+||.|++.- .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 68999988889999999998853 44 44443332 111 13468999999998741 1
Q ss_pred cccCCCcCCCeEEEEeeecC
Q 017438 294 MVRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin~ 313 (371)
-+-+..++.|..|||.+...
T Consensus 81 ~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp HHHHHHHHTTSEEEESSSTT
T ss_pred HHHHHHhhCCcEEEeCCHHH
Confidence 12233478899999998655
No 209
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.54 E-value=0.043 Score=56.66 Aligned_cols=120 Identities=23% Similarity=0.183 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCCcccHHH-HHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCc-CCCeEEEEeeecC
Q 017438 236 IKGKRAVVIGRSNIVGMP-AALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGINP 313 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkp-la~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~i-k~gavVIDvgin~ 313 (371)
.++|++.|+|.|+. |+. +|.+|.++|++|++++.+.....+.+++..+.+.. |.+ .+.+ ....+|+--|+++
T Consensus 5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~----~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI-GHD----AENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHCCCCCEEEECCCCCC
Confidence 46899999999997 999 79999999999999987543222223333333322 211 1112 1234555555544
Q ss_pred CCCCC---CCCCceeecccchhh-hhh--hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 314 VEDAK---SPRGYRLVGDVCYEE-ACE--VASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 314 ~~~~~---~~~g~kl~GDVd~~~-v~~--~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
....- ...|-++.++.++-. ..+ +.-+ |-|=-|.-|+..|+.++++.+
T Consensus 79 ~~~~~~~a~~~~i~i~~~~e~~~~~~~~~~~I~---ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 79 DNPELVAARELGIPVVRRAEMLAELMRFRTSIA---VAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCHHHHHHHHCCCcEEeHHHHHHHHHccCcEEE---EECCCCHHHHHHHHHHHHHhc
Confidence 21000 012336788877632 211 2223 558889999999999999765
No 210
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=95.54 E-value=0.35 Score=49.86 Aligned_cols=167 Identities=17% Similarity=0.207 Sum_probs=103.9
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEeCCCC--CCHHHHHHHHHHhcCCCCccEEEEeCCC---CCCCCHHH
Q 017438 112 GLAVILVGDRKDSATYVRNKKKACQSVGINSFEVHLPED--TSEQEVLKHISVFNDDPSVHGILVQLPL---PCHIDEQS 186 (371)
Q Consensus 112 ~LaiI~vG~d~aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--v~~~el~~~I~~LN~D~~V~GIlVqlPL---p~~i~~~~ 186 (371)
++++.++-+ .|..=--+=..++.++|.++.++.-.+. ..-|-+.+.++-|+.- +|+|.+--|- ..|-..++
T Consensus 60 ~~~~~lF~e--pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~e 135 (395)
T PRK07200 60 GLGISVFRD--NSTRTRFSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMRE 135 (395)
T ss_pred CeEEEEEcC--CCchhHHHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHH
Confidence 344334432 3444444567889999999887643210 1125577777777764 8899998764 22211222
Q ss_pred HHhhCCc--cccc-CccC-cchhhhhccCCCccccccCCHHH-HHHHHHHhCC--CCCCCEEEEEc-------CCcccHH
Q 017438 187 ILNAVSM--EKDV-DGFH-PLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGF--DIKGKRAVVIG-------RSNIVGM 252 (371)
Q Consensus 187 i~~~I~p--~KDV-Dgl~-~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i--~l~GK~vvVIG-------~s~~VGk 252 (371)
+.+...- .++| -..- .+|.+ .+...||=+.+ ++.+.++.|- .++|++|+++| ++..|.+
T Consensus 136 la~~~~~~~~~~~~~~~pPVINa~-------~~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~ 208 (395)
T PRK07200 136 VGAAVDDGYKQGVLPQRPTLVNLQ-------CDIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQ 208 (395)
T ss_pred HHHHhhhhcccccccCCCeEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHH
Confidence 2222110 0111 1222 35642 23567998888 5666666664 38999999986 3446788
Q ss_pred HHHHHhccCCCeEEEEeCC-------------------------CCCHHhhccCCcEEEEcc
Q 017438 253 PAALLLQREDATVSIVHSR-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 253 pla~lL~~~gAtVtv~h~~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
.++.+|...|++|++++-. +.|+++.+++||+|.+-+
T Consensus 209 Sl~~~~~~lG~~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~ 270 (395)
T PRK07200 209 GIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS 270 (395)
T ss_pred HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 9999989999999998633 256778999999999753
No 211
>PRK06398 aldose dehydrogenase; Validated
Probab=95.54 E-value=0.028 Score=52.91 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|.++|++|++..++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5789999999999889999999999999999987654
No 212
>PRK07680 late competence protein ComER; Validated
Probab=95.51 E-value=0.018 Score=55.30 Aligned_cols=69 Identities=19% Similarity=0.306 Sum_probs=51.3
Q ss_pred EEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCCc----c
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPNM----V 295 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~~----v 295 (371)
++.|||.|.+ |..++..|.+.| .+|++++++. .+.++.+.++|+||.++. |.. +
T Consensus 2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~-p~~~~~vl 79 (273)
T PRK07680 2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVK-PLDIYPLL 79 (273)
T ss_pred EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecC-HHHHHHHH
Confidence 5899999885 999999999887 3789988752 244556789999999984 332 2
Q ss_pred c--CCCcCCCeEEEEee
Q 017438 296 R--GSWIKPGAVIIDVG 310 (371)
Q Consensus 296 ~--~d~ik~gavVIDvg 310 (371)
+ ...++++.+||++.
T Consensus 80 ~~l~~~l~~~~~iis~~ 96 (273)
T PRK07680 80 QKLAPHLTDEHCLVSIT 96 (273)
T ss_pred HHHHhhcCCCCEEEEEC
Confidence 1 13467788999987
No 213
>PRK14030 glutamate dehydrogenase; Provisional
Probab=95.46 E-value=0.086 Score=55.03 Aligned_cols=51 Identities=31% Similarity=0.315 Sum_probs=42.8
Q ss_pred cccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 217 FIPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 217 ~~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
-.+.|..|++.. +++.+.+++|++|+|=|.|+ ||..+|..|.+.||+|+.+
T Consensus 203 r~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVav 257 (445)
T PRK14030 203 RPEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVTI 257 (445)
T ss_pred CCCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 346799986654 45678899999999999988 5999999999999997773
No 214
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.44 E-value=0.041 Score=54.67 Aligned_cols=55 Identities=25% Similarity=0.452 Sum_probs=43.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC--------------------------CCCHHhhccCCcEEEEc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR--------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~--------------------------t~~l~~~l~~ADIVIsA 288 (371)
++.++|+|||+|. ||..++..|+..| +++.+++.+ +.+++ .+++||+||.+
T Consensus 3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit 80 (319)
T PTZ00117 3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT 80 (319)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence 4678999999976 5999999999888 688877642 13444 78999999999
Q ss_pred cCCC
Q 017438 289 VGQP 292 (371)
Q Consensus 289 vG~p 292 (371)
+|.|
T Consensus 81 ag~~ 84 (319)
T PTZ00117 81 AGVQ 84 (319)
T ss_pred CCCC
Confidence 9764
No 215
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.40 E-value=0.031 Score=54.23 Aligned_cols=72 Identities=19% Similarity=0.217 Sum_probs=53.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---------------------------------------CCCHHhhc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---------------------------------------TKNPEEIT 279 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---------------------------------------t~~l~~~l 279 (371)
++|.|||+|.+ |..+|..|++.|.+|+++.+. +.++++.+
T Consensus 4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 58999999775 999999999999999998653 23556678
Q ss_pred cCCcEEEEccCCCC-----ccc--CCCcCCCeEEEEeee
Q 017438 280 RQADIIISAVGQPN-----MVR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 280 ~~ADIVIsAvG~p~-----~v~--~d~ik~gavVIDvgi 311 (371)
++||+||.+++..- ++. ...+++++++.+...
T Consensus 83 ~~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~sntS 121 (287)
T PRK08293 83 KDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSS 121 (287)
T ss_pred cCCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECcc
Confidence 99999999998431 111 134677887766443
No 216
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.03 Score=53.05 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=44.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-C---------------------CHHhhccCCcEEEEccCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-K---------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-~---------------------~l~~~l~~ADIVIsAvG~ 291 (371)
..++||+++|.|+|+-+|+.++..|+++|++|+++.++. . ++.+...+.|++|+.+|.
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 356899999999998889999999999999998876543 1 122344567888877774
No 217
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.36 E-value=0.034 Score=50.88 Aligned_cols=57 Identities=21% Similarity=0.316 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC------------CH----H---hhccCCcEEEEccCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK------------NP----E---EITRQADIIISAVGQ 291 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~------------~l----~---~~l~~ADIVIsAvG~ 291 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.. |+ + +.....|+||..+|.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 478999999999998999999999999999998876421 11 1 123457888887774
No 218
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.022 Score=53.38 Aligned_cols=38 Identities=29% Similarity=0.377 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++|++++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~ 39 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA 39 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988899999999999999999987653
No 219
>PLN02858 fructose-bisphosphate aldolase
Probab=95.32 E-value=0.022 Score=66.80 Aligned_cols=75 Identities=20% Similarity=0.272 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCcc-----cC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNMV-----RG 297 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~v-----~~ 297 (371)
.+++|-+||.|.+ |.++|..|++.|.+|++.+++. .+..+..+++|+||+.+..+.-+ ..
T Consensus 3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~ 81 (1378)
T PLN02858 3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGD 81 (1378)
T ss_pred CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhch
Confidence 4678999999986 9999999999999999998863 35668889999999998865522 11
Q ss_pred ----CCcCCCeEEEEeeec
Q 017438 298 ----SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 ----d~ik~gavVIDvgin 312 (371)
+.+++|.++||+++.
T Consensus 82 ~g~~~~l~~g~iivd~STi 100 (1378)
T PLN02858 82 EGAAKGLQKGAVILIRSTI 100 (1378)
T ss_pred hhHHhcCCCcCEEEECCCC
Confidence 235789999999865
No 220
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.31 E-value=0.042 Score=54.60 Aligned_cols=55 Identities=20% Similarity=0.387 Sum_probs=43.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCCC-----------------------CHHhhccCCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRTK-----------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t~-----------------------~l~~~l~~ADIVIsAvG~ 291 (371)
.+++|.|||+|. ||..++..|+.+|. ++.+++.+.. +-.+.+++|||||.+.|.
T Consensus 5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence 578999999977 69999999998885 6777765321 123568999999999996
Q ss_pred C
Q 017438 292 P 292 (371)
Q Consensus 292 p 292 (371)
|
T Consensus 84 ~ 84 (315)
T PRK00066 84 P 84 (315)
T ss_pred C
Confidence 5
No 221
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=95.30 E-value=0.027 Score=49.70 Aligned_cols=51 Identities=25% Similarity=0.347 Sum_probs=43.1
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------CHHhhccCCcEEEEccCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NPEEITRQADIIISAVGQ 291 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~l~~~l~~ADIVIsAvG~ 291 (371)
|+|+|+++.+|+.++..|+++|.+|+..-|+.. .+.+.++.+|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 689999888999999999999999999877632 234667899999998884
No 222
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=95.29 E-value=0.052 Score=54.07 Aligned_cols=93 Identities=19% Similarity=0.267 Sum_probs=62.6
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HHh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEE 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~~ 277 (371)
+|.....+..+...+..-.|++|+|.|.|. +|..+++++...|++|+++...... +.+
T Consensus 165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~ 243 (360)
T PLN02586 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA 243 (360)
T ss_pred hcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh
Confidence 444444555565555444799999999876 6999999999999987765432211 112
Q ss_pred hccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 278 ITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
.+..+|+||.++|.+..+. -+.+++|..++.+|..
T Consensus 244 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 244 AIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred hcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence 2234799999998765332 2457888888888864
No 223
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.039 Score=51.36 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999889999999999999999888764
No 224
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.27 E-value=0.022 Score=59.24 Aligned_cols=113 Identities=14% Similarity=0.225 Sum_probs=68.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-CCCH-----------------HhhccCCcEEEEccCCCCc-
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-TKNP-----------------EEITRQADIIISAVGQPNM- 294 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-t~~l-----------------~~~l~~ADIVIsAvG~p~~- 294 (371)
++++||+|+|||.|.+ +.-=+..|++.||.|||+... ++++ .+.+..+++||.||+.+.+
T Consensus 8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHh
Confidence 6899999999999985 766677888899999998433 1112 2457789999999987653
Q ss_pred --ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh---cceeccCCCCccHHHHHHHHHHHH
Q 017438 295 --VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV---ASAITPVPGGVGPMTIAMLLSNTL 361 (371)
Q Consensus 295 --v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~---a~~iTPVPGGVGp~T~amLl~n~v 361 (371)
|-.+ -+..-+.+++.-++. .+|+-|.++.+. .-+|+ -+|-.|..+..|-+++-
T Consensus 87 ~~i~~~-a~~~~~lvN~~d~~~-----------~~~f~~pa~~~~g~l~iais--T~G~sP~~a~~lr~~ie 144 (457)
T PRK10637 87 QRVSEA-AEARRIFCNVVDAPK-----------AASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLE 144 (457)
T ss_pred HHHHHH-HHHcCcEEEECCCcc-----------cCeEEEeeEEecCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence 2111 122224455553332 123333332222 22343 36788887777655443
No 225
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.26 E-value=0.035 Score=57.41 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.+|+|.|+|.|.. |+++|.+|.++|++|+++..+
T Consensus 12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~ 46 (458)
T PRK01710 12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKK 46 (458)
T ss_pred hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCC
Confidence 46899999999997 999999999999999999865
No 226
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.26 E-value=0.017 Score=53.04 Aligned_cols=53 Identities=32% Similarity=0.429 Sum_probs=35.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------------CCCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------------TKNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------------t~~l~~~l~~ADI 284 (371)
++|+|+|.|- ||-|+|..|++.|.+|+.+..+ +.+.++.+++||+
T Consensus 1 M~I~ViGlGy-vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGY-VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--ST-THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCc-chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 4799999988 5999999999999999999643 2344566777888
Q ss_pred EEEccCCC
Q 017438 285 IISAVGQP 292 (371)
Q Consensus 285 VIsAvG~p 292 (371)
+|.+++.|
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 88777755
No 227
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.22 E-value=0.023 Score=55.12 Aligned_cols=67 Identities=21% Similarity=0.261 Sum_probs=49.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||.|.+ |.++|..|+..|.+|++.+++. .++ +.+.
T Consensus 5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 82 (292)
T PRK07530 5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDLA 82 (292)
T ss_pred CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHhc
Confidence 68999999886 9999999999999999987642 122 3467
Q ss_pred CCcEEEEccCCCCc-----cc--CCCcCCCeEEE
Q 017438 281 QADIIISAVGQPNM-----VR--GSWIKPGAVII 307 (371)
Q Consensus 281 ~ADIVIsAvG~p~~-----v~--~d~ik~gavVI 307 (371)
+||+||.+++...- +. ...++++++++
T Consensus 83 ~aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~ 116 (292)
T PRK07530 83 DCDLVIEAATEDETVKRKIFAQLCPVLKPEAILA 116 (292)
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEE
Confidence 89999999975321 21 13467788776
No 228
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.22 E-value=0.043 Score=51.87 Aligned_cols=48 Identities=21% Similarity=0.270 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 224 GCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 224 gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
++.+.+++.+.+++|++|+|.|.|+ ||+.++..|.++|+ .|.++.++.
T Consensus 9 ~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 9 AMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred HHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3455566778899999999999988 59999999999987 577776543
No 229
>PLN02477 glutamate dehydrogenase
Probab=95.20 E-value=0.038 Score=57.12 Aligned_cols=53 Identities=26% Similarity=0.332 Sum_probs=44.3
Q ss_pred ccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeCC
Q 017438 218 IPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHSR 271 (371)
Q Consensus 218 ~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~~ 271 (371)
.+.|..|+... +++++.+++|++|+|.|.|+ ||+.++.+|.++|+.|+ |+.++
T Consensus 182 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 182 EAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence 47788886554 45678899999999999988 59999999999999877 77654
No 230
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=95.20 E-value=0.23 Score=52.19 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=56.7
Q ss_pred HhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCCC-----------------------------
Q 017438 231 RYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSRT----------------------------- 272 (371)
Q Consensus 231 ~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~t----------------------------- 272 (371)
.+.-+++|++|.|+|.+ +.-...++..|.++|++|.+..-.-
T Consensus 317 ~l~~~~~~~~VavlGlafK~~tdD~R~Spa~~li~~L~~~G~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (473)
T PLN02353 317 SMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTA 396 (473)
T ss_pred HhhcccCCCEEEEEeeeecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChHHHHHHhhccccccccccccccccccc
Confidence 33346899999999952 2236789999999999999875331
Q ss_pred -------CCHHhhccCCcEEEEccCCCCcccCCC------cCCCeEEEEee
Q 017438 273 -------KNPEEITRQADIIISAVGQPNMVRGSW------IKPGAVIIDVG 310 (371)
Q Consensus 273 -------~~l~~~l~~ADIVIsAvG~p~~v~~d~------ik~gavVIDvg 310 (371)
.++.+.+++||+||.++..+.|-..+| +++..+|||.-
T Consensus 397 ~~~~~~~~~~~~a~~~aD~vvi~t~~~ef~~l~~~~~~~~m~~~~~viD~r 447 (473)
T PLN02353 397 VKQVSVVWDAYEATKGAHGICILTEWDEFKTLDYQKIYDNMQKPAFVFDGR 447 (473)
T ss_pred ccceeeeCCHHHHhcCCCEEEECCCChHhcccCHHHHHHhccCCCEEEECC
Confidence 022467899999999999887632222 34445899943
No 231
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed
Probab=95.20 E-value=0.27 Score=49.54 Aligned_cols=153 Identities=16% Similarity=0.154 Sum_probs=97.2
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEeCCCC--------------CCHHHHHHHHHHhcCCCCccEEEEeCCCCCCCC-----
Q 017438 123 DSATYVRNKKKACQSVGINSFEVHLPED--------------TSEQEVLKHISVFNDDPSVHGILVQLPLPCHID----- 183 (371)
Q Consensus 123 aS~~Yv~~k~k~~~~~GI~~~~~~lp~~--------------v~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~----- 183 (371)
.|..---.=..++.++|-++.++.-... ...|.+.+.+.-|+.- +++|.+-.|-.. .+
T Consensus 48 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~g-~~~~~~~ 124 (335)
T PRK04523 48 PSLRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFELGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPKF-VDWSKDR 124 (335)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCcccccchhhcccccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCccc-cccccch
Confidence 3444444567889999999887643321 1236677777777764 788888865221 11
Q ss_pred HHHHHhhCCcccccCccCcchhhhhccCCCccccccCCHHHHHHHHHHhCCCC-CCCEEEEEcCC------cccHHHHHH
Q 017438 184 EQSILNAVSMEKDVDGFHPLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDI-KGKRAVVIGRS------NIVGMPAAL 256 (371)
Q Consensus 184 ~~~i~~~I~p~KDVDgl~~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l-~GK~vvVIG~s------~~VGkpla~ 256 (371)
....++.+...-+ +-.+|. + .. +.||=+.+=+-.++++...+ +|++++|++.| .-|.+.++.
T Consensus 125 ~~~~~~~~a~~s~---vPVINa-----~--~~-~HPtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~ 193 (335)
T PRK04523 125 QDQVLNSFAKYST---VPVINM-----E--TI-THPCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALL 193 (335)
T ss_pred hHHHHHHHHHhCC---CCEEEC-----C--CC-CChHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHH
Confidence 1223333333222 344564 2 23 77998888444444433458 89999887643 236888888
Q ss_pred HhccCCCeEEEEeC-C-------------------------CCCHHhhccCCcEEEEcc
Q 017438 257 LLQREDATVSIVHS-R-------------------------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 257 lL~~~gAtVtv~h~-~-------------------------t~~l~~~l~~ADIVIsAv 289 (371)
++...|++|++|+- . +.++++.+++||+|.+-.
T Consensus 194 ~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~~ 252 (335)
T PRK04523 194 IATRLGMDVTLLCPTPDYILDERYMDWAEQNAAESGGSLTVSHDIDSAYAGADVVYAKS 252 (335)
T ss_pred HHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEece
Confidence 89999999999975 2 246678899999998644
No 232
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.18 E-value=0.021 Score=55.46 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=28.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|.|||+|.+ |.++|..|++.|..|++++++
T Consensus 4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 68999999885 999999999999999999764
No 233
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.14 E-value=0.035 Score=56.67 Aligned_cols=75 Identities=21% Similarity=0.324 Sum_probs=52.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhcc-C-C-CeEEEEeCCC-----------------------CCHHhhccCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQR-E-D-ATVSIVHSRT-----------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~-~-g-AtVtv~h~~t-----------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
-+++.|||.|.- ++.-...+.. + + -+|.+.+++. .+.++.+++|||||++|+.
T Consensus 155 a~~l~iiG~G~Q-A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s 233 (379)
T PRK06199 155 SKVVGLLGPGVM-GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSG 233 (379)
T ss_pred CCEEEEECCcHH-HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCC
Confidence 467777777765 7666555544 2 2 3677766541 3467889999999999974
Q ss_pred C-------CcccCCCcCCCeEEEEeeecC
Q 017438 292 P-------NMVRGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 292 p-------~~v~~d~ik~gavVIDvgin~ 313 (371)
. .++..+|+|||+.|+=+|...
T Consensus 234 ~~~~~s~~Pv~~~~~lkpG~hv~~ig~~e 262 (379)
T PRK06199 234 ETGDPSTYPYVKREWVKPGAFLLMPAACR 262 (379)
T ss_pred CCCCCCcCcEecHHHcCCCcEEecCCccc
Confidence 2 368999999999998777543
No 234
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=95.07 E-value=0.019 Score=60.05 Aligned_cols=71 Identities=25% Similarity=0.280 Sum_probs=52.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------CHHhh---ccCCcEEEEccCCCCc---
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------NPEEI---TRQADIIISAVGQPNM--- 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------~l~~~---l~~ADIVIsAvG~p~~--- 294 (371)
++.|||.|.+ |.++|..|+++|.+|++.+++.. ++++. +.++|+||..+.....
T Consensus 1 ~IG~IGLG~M-G~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~ 79 (467)
T TIGR00873 1 DIGVIGLAVM-GSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA 79 (467)
T ss_pred CEEEEeeHHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHH
Confidence 3779999886 99999999999999999987631 22222 3468988888765432
Q ss_pred -cc--CCCcCCCeEEEEeee
Q 017438 295 -VR--GSWIKPGAVIIDVGI 311 (371)
Q Consensus 295 -v~--~d~ik~gavVIDvgi 311 (371)
+. ...+++|.+|||.|.
T Consensus 80 Vi~~l~~~L~~g~iIID~gn 99 (467)
T TIGR00873 80 VINQLLPLLEKGDIIIDGGN 99 (467)
T ss_pred HHHHHHhhCCCCCEEEECCC
Confidence 21 135688999999995
No 235
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=95.07 E-value=0.08 Score=52.64 Aligned_cols=140 Identities=20% Similarity=0.274 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCC----HHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCcccccCccCcchh
Q 017438 130 NKKKACQSVGINSFEVHLPEDTS----EQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSMEKDVDGFHPLNI 205 (371)
Q Consensus 130 ~k~k~~~~~GI~~~~~~lp~~v~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p~KDVDgl~~~N~ 205 (371)
+=.-++..+|-+..++.= +-+ .|-+.+.-+-|.. =++||.+--. .| ..++.+.-.-. +-..|
T Consensus 61 SFeva~~qlGg~~~~l~~--~~~Qlgr~Esi~DTArVLsr--~~D~I~~R~~--~~----~~ve~lA~~s~---VPViN- 126 (310)
T COG0078 61 SFEVAATQLGGHAIYLGP--GDSQLGRGESIKDTARVLSR--MVDAIMIRGF--SH----ETLEELAKYSG---VPVIN- 126 (310)
T ss_pred hHHHHHHHcCCCeEEeCC--CccccCCCCcHHHHHHHHHh--hhheEEEecc--cH----HHHHHHHHhCC---CceEc-
Confidence 345677889999877542 221 1334444444444 2889987643 22 22333322222 22233
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------
Q 017438 206 GRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------- 271 (371)
Q Consensus 206 G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------- 271 (371)
+.++.+.||-..|=+--++++.-.++|++++=+|-|+.|+..+.......|..|+++.-+
T Consensus 127 ------gLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~~ 200 (310)
T COG0078 127 ------GLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAKE 200 (310)
T ss_pred ------ccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHHH
Confidence 236678899999955555555445999999999999999999988888899999998532
Q ss_pred -----------CCCHHhhccCCcEEEEcc
Q 017438 272 -----------TKNPEEITRQADIIISAV 289 (371)
Q Consensus 272 -----------t~~l~~~l~~ADIVIsAv 289 (371)
|.|..+..+.||+|.+-+
T Consensus 201 ~a~~~g~~i~~t~d~~eAv~gADvvyTDv 229 (310)
T COG0078 201 NAKESGGKITLTEDPEEAVKGADVVYTDV 229 (310)
T ss_pred HHHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence 468889999999999654
No 236
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.06 E-value=0.038 Score=57.52 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=70.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcC-CCeEEEEeeecC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIK-PGAVIIDVGINP 313 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik-~gavVIDvgin~ 313 (371)
.+.+|+|+|+|.|++ |++++.+|.++|++|++++++.....+.+.+..|.+.. |.- ..+++. ...+|+-=|+++
T Consensus 12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~---~~~~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADIS-TAE---ASDQLDSFSLVVTSPGWRP 86 (473)
T ss_pred cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEe-CCC---chhHhcCCCEEEeCCCCCC
Confidence 468999999999997 99999999999999999986532222222222222211 100 011221 234444444443
Q ss_pred CCCCC----CCCCceeecccchhhhhh------hcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 314 VEDAK----SPRGYRLVGDVCYEEACE------VASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 314 ~~~~~----~~~g~kl~GDVd~~~v~~------~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
.. +- ...|-++.|++++..... ....+--|-|=.|.-|+.-|+.++++..
T Consensus 87 ~~-p~~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~ 146 (473)
T PRK00141 87 DS-PLLVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEG 146 (473)
T ss_pred CC-HHHHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhc
Confidence 21 00 012335777776521110 0111223568899999999999998764
No 237
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.99 E-value=0.064 Score=55.75 Aligned_cols=119 Identities=15% Similarity=0.136 Sum_probs=67.4
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCc-CCCeEEEEeeecCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGINPVE 315 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~i-k~gavVIDvgin~~~ 315 (371)
.||+|+|+|.|.. |++++.+|. +|++|++...+.....+.-..-+..+ .|. + +.+.+ ....+|+-=|+++..
T Consensus 5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~d~vV~SPgI~~~~ 77 (454)
T PRK01368 5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNA--IAA-L--SDSRWQNLDKIVLSPGIPLTH 77 (454)
T ss_pred CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCce--ecc-C--ChhHhhCCCEEEECCCCCCCC
Confidence 5899999999997 999999998 59999999855432221100001111 111 0 00111 123444444444320
Q ss_pred CCC----CCCCceeecccchhh-hhhhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 316 DAK----SPRGYRLVGDVCYEE-ACEVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 316 ~~~----~~~g~kl~GDVd~~~-v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
+- ...|-++++++++-. ..+ ...+--|-|--|.-|+.-|+.++++.+
T Consensus 78 -p~~~~a~~~gi~v~~e~el~~~~~~-~~~~IaVTGTnGKTTTt~ll~~iL~~~ 129 (454)
T PRK01368 78 -EIVKIAKNFNIPITSDIDLLFEKSK-NLKFIAITGTNGKSTTTALISHILNSN 129 (454)
T ss_pred -HHHHHHHHCCCceecHHHHHHHHhc-CCCEEEEECCCcHHHHHHHHHHHHHhc
Confidence 00 012336888887632 111 111223668899999999999998764
No 238
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.97 E-value=0.04 Score=53.75 Aligned_cols=53 Identities=23% Similarity=0.353 Sum_probs=43.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------------------CCHHhhccCCcEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------------KNPEEITRQADII 285 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------------------~~l~~~l~~ADIV 285 (371)
++|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.++++|+|
T Consensus 5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 68999999885 9999999999999999987532 2344567899999
Q ss_pred EEccCCC
Q 017438 286 ISAVGQP 292 (371)
Q Consensus 286 IsAvG~p 292 (371)
|.++...
T Consensus 84 i~av~~~ 90 (311)
T PRK06130 84 IEAVPEK 90 (311)
T ss_pred EEeccCc
Confidence 9998753
No 239
>PLN02858 fructose-bisphosphate aldolase
Probab=94.97 E-value=0.031 Score=65.61 Aligned_cols=74 Identities=22% Similarity=0.273 Sum_probs=59.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCCc----c-cC-
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPNM----V-RG- 297 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~~----v-~~- 297 (371)
.++|.+||.|.+ |.+++..|++.|.+|++++++. .+..+..+++|+||++++.|.. + ..
T Consensus 324 ~~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 324 VKRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 378999999986 9999999999999999998752 3556778999999999986652 2 11
Q ss_pred ---CCcCCCeEEEEeeec
Q 017438 298 ---SWIKPGAVIIDVGIN 312 (371)
Q Consensus 298 ---d~ik~gavVIDvgin 312 (371)
+.+++|.++||+++.
T Consensus 403 g~~~~l~~g~ivVd~STv 420 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTV 420 (1378)
T ss_pred hHHhcCCCCCEEEECCCC
Confidence 235789999998763
No 240
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.96 E-value=0.03 Score=53.28 Aligned_cols=70 Identities=20% Similarity=0.303 Sum_probs=49.9
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---cccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVRG 297 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~~ 297 (371)
++.|||.|.+ |.+++..|.+.|. .+.+++++. .+..+.++++|+||.++.... ++..
T Consensus 2 ~IgiIG~G~m-G~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~~~vl~~ 80 (258)
T PRK06476 2 KIGFIGTGAI-TEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA 80 (258)
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence 5889999886 9999999988774 356676541 245566789999999998322 2333
Q ss_pred CCcCCCeEEEEee
Q 017438 298 SWIKPGAVIIDVG 310 (371)
Q Consensus 298 d~ik~gavVIDvg 310 (371)
-++++|.+||++.
T Consensus 81 l~~~~~~~vis~~ 93 (258)
T PRK06476 81 LRFRPGQTVISVI 93 (258)
T ss_pred hccCCCCEEEEEC
Confidence 3467888888866
No 241
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.96 E-value=0.039 Score=50.34 Aligned_cols=49 Identities=31% Similarity=0.472 Sum_probs=38.4
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCC--------------------------------------CCCHHhhccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSR--------------------------------------TKNPEEITRQ 281 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~--------------------------------------t~~l~~~l~~ 281 (371)
+|.|||+|.+ |+.+|.+++..|..|+++..+ +.++++.. +
T Consensus 1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~ 78 (180)
T PF02737_consen 1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-D 78 (180)
T ss_dssp EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-T
T ss_pred CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-h
Confidence 6899999875 999999999999999999754 24666666 9
Q ss_pred CcEEEEccC
Q 017438 282 ADIIISAVG 290 (371)
Q Consensus 282 ADIVIsAvG 290 (371)
||+||=++.
T Consensus 79 adlViEai~ 87 (180)
T PF02737_consen 79 ADLVIEAIP 87 (180)
T ss_dssp ESEEEE-S-
T ss_pred hheehhhcc
Confidence 999998875
No 242
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.022 Score=53.09 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=36.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
+++||+++|.|+|.-+|+.++..|.++|++|.++.|+...+
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l 42 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL 42 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 57899999999999999999999999999999998765443
No 243
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=94.93 E-value=0.083 Score=55.22 Aligned_cols=124 Identities=22% Similarity=0.307 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH--HhhccCCcEEEEccCCCCcccCCCcCC-CeEEEEeeec
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP--EEITRQADIIISAVGQPNMVRGSWIKP-GAVIIDVGIN 312 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l--~~~l~~ADIVIsAvG~p~~v~~d~ik~-gavVIDvgin 312 (371)
+.||+|+|+|-|.. |++++..|.++|+.|+++..+.... +..-...+-|=...|. +.. +|... ..+|..=|+.
T Consensus 5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~-~~~--~~~~~~d~vV~SPGi~ 80 (448)
T COG0771 5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGS-HDD--EDLAEFDLVVKSPGIP 80 (448)
T ss_pred ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCc-cch--hccccCCEEEECCCCC
Confidence 45999999999998 9999999999999999998654330 0110001111111121 011 22222 3444444444
Q ss_pred CCCCC----CCCCCceeecccchhhhh-hhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017438 313 PVEDA----KSPRGYRLVGDVCYEEAC-EVASAITPVPGGVGPMTIAMLLSNTLTSAK 365 (371)
Q Consensus 313 ~~~~~----~~~~g~kl~GDVd~~~v~-~~a~~iTPVPGGVGp~T~amLl~n~v~a~~ 365 (371)
+.. | -...|-++.||++.-.-. ..+-++ -|-|==|.-|+..|+.++++++-
T Consensus 81 ~~~-p~v~~A~~~gi~i~~dieL~~r~~~~~p~v-aITGTNGKTTTTsli~~~l~~~G 136 (448)
T COG0771 81 PTH-PLVEAAKAAGIEIIGDIELFYRLSGEAPIV-AITGTNGKTTTTSLIAHLLKAAG 136 (448)
T ss_pred CCC-HHHHHHHHcCCcEEeHHHHHHHhcCCCCEE-EEECCCchHHHHHHHHHHHHhcC
Confidence 321 1 011344789998743211 012222 24477789999999999998864
No 244
>PRK12828 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.031 Score=50.71 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~ 41 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA 41 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence 46899999999999999999999999999999988754
No 245
>PRK05866 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.041 Score=53.18 Aligned_cols=41 Identities=37% Similarity=0.445 Sum_probs=35.8
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
....++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~ 74 (293)
T PRK05866 34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE 74 (293)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35567899999999988889999999999999999987753
No 246
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.89 E-value=0.045 Score=57.29 Aligned_cols=111 Identities=17% Similarity=0.208 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH----------------hhccCCcEEEEccCCCCcccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE----------------EITRQADIIISAVGQPNMVRGSW 299 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~----------------~~l~~ADIVIsAvG~p~~v~~d~ 299 (371)
+.||+|+|+|.|.. |++++.+|..+|++|+++......++ +.++++|+||.+.|.|.--+ .
T Consensus 10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~~~p--~ 86 (488)
T PRK03369 10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRPTAP--V 86 (488)
T ss_pred cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCCCCH--H
Confidence 37899999999997 99999999999999999986432222 22334555555555432100 0
Q ss_pred cCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhh------cceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 300 IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV------ASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 300 ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~------a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++. . ...|-+++|++++-..... ...+--|-|-.|.-|+.-|+.++++.+
T Consensus 87 ~~~-------a--------~~~gi~v~~~iel~~~~~~~~~~~~~~~vIgITGTnGKTTTt~li~~iL~~~ 142 (488)
T PRK03369 87 LAA-------A--------AAAGVPIWGDVELAWRLDAAGCYGPPRRWLVVTGTNGKTTTTSMLHAMLIAA 142 (488)
T ss_pred HHH-------H--------HHCCCcEeeHHHHhhhhhhhhccCCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 000 0 0012356676665210100 001112558899999999999998764
No 247
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=94.88 E-value=0.03 Score=52.09 Aligned_cols=38 Identities=32% Similarity=0.399 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|.+.+++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~ 44 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP 44 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 57899999999988899999999999999999887753
No 248
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=94.87 E-value=0.022 Score=52.90 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
.|++++|+|+|.|++ |..++..|...|. ++++++.
T Consensus 18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~ 53 (202)
T TIGR02356 18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDD 53 (202)
T ss_pred HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecC
Confidence 578999999999995 9999999999996 7888853
No 249
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.86 E-value=0.051 Score=55.99 Aligned_cols=40 Identities=28% Similarity=0.402 Sum_probs=35.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
...++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~ 212 (406)
T PRK07424 173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS 212 (406)
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467899999999999999999999999999999887654
No 250
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.85 E-value=0.055 Score=53.22 Aligned_cols=69 Identities=23% Similarity=0.403 Sum_probs=51.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------------------------CCHHhhccCCcEEEEc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------------------------~~l~~~l~~ADIVIsA 288 (371)
.+|.|||.|.+ |.++|..|.+.|.+|+++.+.. .+. +.+..+|+||.+
T Consensus 3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil~ 80 (341)
T PRK08229 3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATADLVLVT 80 (341)
T ss_pred ceEEEECCCHH-HHHHHHHHHhcCCcEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhccCCCEEEEE
Confidence 47999999885 9999999999999999987641 112 345789999999
Q ss_pred cCCCCc---cc--CCCcCCCeEEEEe
Q 017438 289 VGQPNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 289 vG~p~~---v~--~d~ik~gavVIDv 309 (371)
+..+.. +. ...++++.+|+++
T Consensus 81 vk~~~~~~~~~~l~~~~~~~~iii~~ 106 (341)
T PRK08229 81 VKSAATADAAAALAGHARPGAVVVSF 106 (341)
T ss_pred ecCcchHHHHHHHHhhCCCCCEEEEe
Confidence 976543 11 1245778889888
No 251
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.84 E-value=0.12 Score=52.27 Aligned_cols=112 Identities=22% Similarity=0.287 Sum_probs=68.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhcc-CCCe---EEEEeCCC----------C-------CHHhhccCCcEEEEccCCCC--
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQR-EDAT---VSIVHSRT----------K-------NPEEITRQADIIISAVGQPN-- 293 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~-~gAt---Vtv~h~~t----------~-------~l~~~l~~ADIVIsAvG~p~-- 293 (371)
++.+|.|||+++.||+-+..+|.+ .+.. +..+.+.. + +. +...+.|+++.|+|.--
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~-~~~~~~Divf~a~~~~~s~ 82 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKI-NSFEGVDIAFFSAGGEVSR 82 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCH-HHhcCCCEEEECCChHHHH
Confidence 456899999999999999999984 5555 55554431 1 11 23478999999987421
Q ss_pred cccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHH
Q 017438 294 MVRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 294 ~v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amL 356 (371)
-+-+...+.|++|||.+-.+.-++.-+ =.+-.|..+.+.+..+.+ ..|| -.|++|+
T Consensus 83 ~~~~~~~~~G~~VID~Ss~fR~~~~vp---lvvPEvN~e~i~~~~~iI-anPn---C~tt~~~ 138 (347)
T PRK06728 83 QFVNQAVSSGAIVIDNTSEYRMAHDVP---LVVPEVNAHTLKEHKGII-AVPN---CSALQMV 138 (347)
T ss_pred HHHHHHHHCCCEEEECchhhcCCCCCC---eEeCCcCHHHHhccCCEE-ECCC---CHHHHHH
Confidence 122233467999999997764332111 234445545544422433 4675 5666666
No 252
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=94.77 E-value=0.083 Score=51.89 Aligned_cols=85 Identities=19% Similarity=0.312 Sum_probs=58.6
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC-------------------CCCHHhhcc---CC
Q 017438 226 IELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR-------------------TKNPEEITR---QA 282 (371)
Q Consensus 226 i~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~-------------------t~~l~~~l~---~A 282 (371)
+..+++.+. ..|++|+|+|+|. +|..+++++...|+ .|+++.+. ..++.+.++ ..
T Consensus 159 ~~al~~~~~-~~g~~VlV~G~G~-vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~ 236 (343)
T PRK09880 159 IHAAHQAGD-LQGKRVFVSGVGP-IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYF 236 (343)
T ss_pred HHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCC
Confidence 333444443 3799999999865 69999999999998 56665432 122333322 37
Q ss_pred cEEEEccCCCCcc--cCCCcCCCeEEEEeeec
Q 017438 283 DIIISAVGQPNMV--RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 283 DIVIsAvG~p~~v--~~d~ik~gavVIDvgin 312 (371)
|++|.++|.+..+ --+.+++|..++.+|..
T Consensus 237 D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 268 (343)
T PRK09880 237 DVSFEVSGHPSSINTCLEVTRAKGVMVQVGMG 268 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence 9999999986543 23568899999999964
No 253
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.75 E-value=0.039 Score=52.21 Aligned_cols=52 Identities=27% Similarity=0.425 Sum_probs=42.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------CHHhh-ccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------NPEEI-TRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------------~l~~~-l~~ADIVIsAvG~ 291 (371)
++++|+|.|. +|..+|..|.++|.+|++..+... -|++. +.+||++|.+||.
T Consensus 1 m~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 5799999998 499999999999999999875521 13444 7889999999986
No 254
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.72 E-value=0.028 Score=52.24 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=35.9
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
...++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~ 45 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA 45 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH
Confidence 3468999999999999999999999999999999998764
No 255
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=94.72 E-value=0.035 Score=56.70 Aligned_cols=76 Identities=16% Similarity=0.277 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCC---------------C------CHH-hhccCCcEEEEccCCC-
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRT---------------K------NPE-EITRQADIIISAVGQP- 292 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t---------------~------~l~-~~l~~ADIVIsAvG~p- 292 (371)
..++|.|+|++|.+|+-+..+|.++ +.+|+...+.. . +++ +.++++|+||.|.|.-
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5579999999999999999999988 67888775431 0 111 1247799999999852
Q ss_pred --CcccCCCcCCCeEEEEeeecCC
Q 017438 293 --NMVRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 293 --~~v~~d~ik~gavVIDvgin~~ 314 (371)
++++. + +.|..|||++-...
T Consensus 117 s~~i~~~-~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 117 TQEIIKA-L-PKDLKIVDLSADFR 138 (381)
T ss_pred HHHHHHH-H-hCCCEEEEcCchhc
Confidence 23443 3 67899999997654
No 256
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=94.71 E-value=0.088 Score=52.48 Aligned_cols=56 Identities=27% Similarity=0.385 Sum_probs=43.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC--------------------------CCCHHhhccCCcEEEEc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR--------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~--------------------------t~~l~~~l~~ADIVIsA 288 (371)
++.++|+|||+|. ||..++..|+..| ++|.+.+.. +.++ +.+++||+||.+
T Consensus 4 ~~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t 81 (321)
T PTZ00082 4 IKRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT 81 (321)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence 4558999999977 5999999998888 477777543 1344 578999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 82 ag~~~ 86 (321)
T PTZ00082 82 AGLTK 86 (321)
T ss_pred CCCCC
Confidence 98653
No 257
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.69 E-value=0.52 Score=48.70 Aligned_cols=160 Identities=21% Similarity=0.280 Sum_probs=101.3
Q ss_pred HHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCccEEEEeCCCCC---C---CCHHHHHhhCCcccccCccC
Q 017438 128 VRNKKKACQSVGINSFEVHLPEDTSEQEVLKHISVFNDDPSVHGILVQLPLPC---H---IDEQSILNAVSMEKDVDGFH 201 (371)
Q Consensus 128 v~~k~k~~~~~GI~~~~~~lp~~v~~~el~~~I~~LN~D~~V~GIlVqlPLp~---~---i~~~~i~~~I~p~KDVDgl~ 201 (371)
++--...|+++||+ +.+.|+..|.-|. +++.+|=|. | +|.-.+ -.-+++..... .
T Consensus 229 aNElali~~~~GId--------------vwevIeaAnt~P~---~~~~~PGpGvGGHCIpvDP~fl-~~ka~~yg~~~-r 289 (436)
T COG0677 229 ANELALICNAMGID--------------VWEVIEAANTKPR---VNIFYPGPGVGGHCIPVDPYFL-TWKAPEYGLPA-R 289 (436)
T ss_pred HHHHHHHHHHhCCc--------------HHHHHHHhccCCc---eeecCCCCCCCCcccccCchhe-eecccccCCch-H
Confidence 44456677888876 5568888999886 778888764 2 333222 22222222211 1
Q ss_pred cchhhhhccCCCccccccCCHHHHHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC-
Q 017438 202 PLNIGRLAMRGREPLFIPCTPKGCIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR- 271 (371)
Q Consensus 202 ~~N~G~l~~g~~~~~~~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~- 271 (371)
..-+.+.. ++..+.| ...-+.+.|.+.+..++|.+|+|+|-. +.=...+..+|.+.|++|.++.-+
T Consensus 290 lI~tAreI-N~~mP~~---Vv~~~~~al~~~~k~~~~skIlvlGlayK~dvdD~ReSPa~~ii~~l~~~g~~v~~~DP~v 365 (436)
T COG0677 290 LIRTAREI-NDSMPRH---VVDRVKEALNKAGKPLSGSKILVLGLAYKGDVDDLRESPALDIIELLEEWGGEVLVYDPYV 365 (436)
T ss_pred HHHHHHHH-hccCCHH---HHHHHHHHHHHcCCCCcCceEEEEEeeecCCCcccccCchHHHHHHHHHhCCeEEEECCCC
Confidence 11122222 1222222 123355566689999999999999942 122456788899999999988532
Q ss_pred ------------C-CCHHhhccCCcEEEEccCCCCc--ccCCCcC-CCeEEEEee
Q 017438 272 ------------T-KNPEEITRQADIIISAVGQPNM--VRGSWIK-PGAVIIDVG 310 (371)
Q Consensus 272 ------------t-~~l~~~l~~ADIVIsAvG~p~~--v~~d~ik-~gavVIDvg 310 (371)
+ ..+++.++++|+||.+|-...| ++.+.+. ...+|+|.-
T Consensus 366 ~~~~~~~~~~~~~~~~~e~al~~~D~vVi~tDH~~fk~id~~~i~~~~~vivDtr 420 (436)
T COG0677 366 KELPTREDGEGVTLAILEEALKDADAVVIATDHSEFKEIDYEAIGKEAKVIVDTR 420 (436)
T ss_pred CcchhhhhccccchhhHHHHhccCCEEEEEeccHHhhcCCHHHhccCCcEEEECc
Confidence 2 4677899999999999988776 7766664 467888854
No 258
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.65 E-value=0.07 Score=51.15 Aligned_cols=53 Identities=26% Similarity=0.346 Sum_probs=41.6
Q ss_pred EEEEcCCcccHHHHHHHhccCC----CeEEEEeCC-------------------------CCCHHhhccCCcEEEEccCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRED----ATVSIVHSR-------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~-------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
++|||+|+.+|..++..|+..| .+|++++.+ +.|+++.+++||+||.++|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799996678999999988888 577777532 24567889999999999986
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 81 ~~ 82 (263)
T cd00650 81 GR 82 (263)
T ss_pred CC
Confidence 53
No 259
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.06 Score=49.41 Aligned_cols=37 Identities=32% Similarity=0.399 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 4679999999998888999999999999998887654
No 260
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.63 E-value=0.024 Score=53.43 Aligned_cols=77 Identities=21% Similarity=0.409 Sum_probs=53.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC------------------------------------------
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR------------------------------------------ 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~------------------------------------------ 271 (371)
.|++++|+|+|.|++ |..++..|...|. ++++++..
T Consensus 18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 578899999999995 9999999999996 78777321
Q ss_pred -----CCCHHhhccCCcEEEEccCCCCc---ccCCCcCCCeEEEEeeec
Q 017438 272 -----TKNPEEITRQADIIISAVGQPNM---VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 272 -----t~~l~~~l~~ADIVIsAvG~p~~---v~~d~ik~gavVIDvgin 312 (371)
..++.+.++++|+||.++..+.. +..-..+.+.-+|+.|+.
T Consensus 97 ~~~i~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~~ 145 (228)
T cd00757 97 NERLDAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAVL 145 (228)
T ss_pred cceeCHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 01234567889999999886542 322223345556666543
No 261
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.60 E-value=0.045 Score=50.29 Aligned_cols=38 Identities=29% Similarity=0.358 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|+++|+|+++-+|+.++..|+++|++|++..|+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999899999999999999999988764
No 262
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.55 E-value=0.08 Score=49.55 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998889999999999999999887654
No 263
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.54 E-value=0.038 Score=51.69 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~ 42 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDE 42 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 468999999999998899999999999999999887653
No 264
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=94.52 E-value=0.071 Score=50.90 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC-----------------CCH----H
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT-----------------KNP----E 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t-----------------~~l----~ 276 (371)
+|....++..+++.+. ..|++|+|+|.|. +|..+++++...|++ |+++.+.. .+. .
T Consensus 103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~ 180 (280)
T TIGR03366 103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQG 180 (280)
T ss_pred hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHH
Confidence 4433444555555544 3899999999976 699999999999986 77664321 111 1
Q ss_pred hhc--cCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 277 EIT--RQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~l--~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+ +.+|++|-++|.+..+. -+.++++..++.+|..
T Consensus 181 ~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 181 GLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccC
Confidence 112 34899999999776432 3567888889999953
No 265
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.50 E-value=0.059 Score=50.31 Aligned_cols=38 Identities=29% Similarity=0.429 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45889999999999999999999999999999888665
No 266
>PRK08339 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.042 Score=52.01 Aligned_cols=38 Identities=29% Similarity=0.403 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 45899999999998888999999999999999998765
No 267
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.49 E-value=0.035 Score=51.64 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~ 43 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA 43 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH
Confidence 57899999999999999999999999999999988763
No 268
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.036 Score=51.43 Aligned_cols=38 Identities=32% Similarity=0.446 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|.+..|+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~ 41 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA 41 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 47899999999999999999999999999999887763
No 269
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=94.45 E-value=0.054 Score=49.94 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 5789999999998889999999999999999887654
No 270
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.44 E-value=0.048 Score=51.09 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999888999999999999999998765
No 271
>PLN02253 xanthoxin dehydrogenase
Probab=94.43 E-value=0.068 Score=50.51 Aligned_cols=37 Identities=30% Similarity=0.422 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4789999999999989999999999999999888654
No 272
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.42 E-value=0.047 Score=50.30 Aligned_cols=37 Identities=30% Similarity=0.466 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 4789999999999999999999999999999888665
No 273
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.40 E-value=0.075 Score=52.12 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=43.3
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||.|-+ |.++|..|+++|.+|++++++. .++.+.++
T Consensus 3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 47999998775 9999999999999999997652 24446678
Q ss_pred CCcEEEEccCCC
Q 017438 281 QADIIISAVGQP 292 (371)
Q Consensus 281 ~ADIVIsAvG~p 292 (371)
++|+||.+++..
T Consensus 82 ~ad~Vi~avpe~ 93 (308)
T PRK06129 82 DADYVQESAPEN 93 (308)
T ss_pred CCCEEEECCcCC
Confidence 999999998753
No 274
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.047 Score=50.82 Aligned_cols=38 Identities=34% Similarity=0.479 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL 43 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 47899999999988889999999999999999887653
No 275
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=94.38 E-value=0.053 Score=59.23 Aligned_cols=73 Identities=30% Similarity=0.360 Sum_probs=55.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC----------------CCHHhhccCCcEEEEccCCCC---ccc-
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT----------------KNPEEITRQADIIISAVGQPN---MVR- 296 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t----------------~~l~~~l~~ADIVIsAvG~p~---~v~- 296 (371)
++|.|||.|.+ |..++..|.+.| ..|++++++. .++.+.+.++|+||.+++... .+.
T Consensus 4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~ 82 (735)
T PRK14806 4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLAD 82 (735)
T ss_pred cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 68999999885 999999999888 4788887652 245566889999999998432 121
Q ss_pred -CCCcCCCeEEEEeeec
Q 017438 297 -GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 297 -~d~ik~gavVIDvgin 312 (371)
...++++.+|+|++..
T Consensus 83 l~~~~~~~~ii~d~~sv 99 (735)
T PRK14806 83 LKPLLSEHAIVTDVGST 99 (735)
T ss_pred HHHhcCCCcEEEEcCCC
Confidence 1346788999999853
No 276
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.057 Score=50.23 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++++||+++|.|+++-+|+.++..|+++|+.|.++.+.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence 467999999999999989999999999999998887654
No 277
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=94.32 E-value=0.13 Score=51.81 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC---------------CCH-HhhccCCcEEEEccCCCCc--c
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---------------KNP-EEITRQADIIISAVGQPNM--V 295 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t---------------~~l-~~~l~~ADIVIsAvG~p~~--v 295 (371)
...+|.|+|+++.+|+-+..+|.+++. ++....+.. .++ .+.+.++|+||.|+|.-.. +
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~ 85 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKF 85 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHH
Confidence 467899999999999999999988653 443333221 111 1345789999999974311 1
Q ss_pred cCCCcCCCeEEEEeeecCC
Q 017438 296 RGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d~ik~gavVIDvgin~~ 314 (371)
-++..+.|+.|||.+-.+.
T Consensus 86 ~~~~~~~g~~VIDlS~~fR 104 (344)
T PLN02383 86 GPIAVDKGAVVVDNSSAFR 104 (344)
T ss_pred HHHHHhCCCEEEECCchhh
Confidence 1223467999999986653
No 278
>PRK05717 oxidoreductase; Validated
Probab=94.32 E-value=0.045 Score=51.01 Aligned_cols=39 Identities=23% Similarity=0.241 Sum_probs=34.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+..++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 467899999999999889999999999999999988543
No 279
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.041 Score=51.35 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999988764
No 280
>PRK08265 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.049 Score=51.19 Aligned_cols=38 Identities=32% Similarity=0.457 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA 40 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47899999999988889999999999999999987753
No 281
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.29 E-value=0.044 Score=54.70 Aligned_cols=76 Identities=20% Similarity=0.212 Sum_probs=51.8
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC---eEEEEeCCC---------------CCHH-hhccCCcEEEEccCCCC--ccc
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA---TVSIVHSRT---------------KNPE-EITRQADIIISAVGQPN--MVR 296 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA---tVtv~h~~t---------------~~l~-~~l~~ADIVIsAvG~p~--~v~ 296 (371)
+.+|.|+|+++.+|+-+..+|.+++. ++....+.. .++. ..+.++|+||.|+|.-. -+-
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~ 80 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA 80 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence 46899999999999999999998764 345454331 0111 22468999999997421 122
Q ss_pred CCCcCCCeEEEEeeecC
Q 017438 297 GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 297 ~d~ik~gavVIDvgin~ 313 (371)
+..++.|++|||.+-.+
T Consensus 81 ~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 81 PKAAAAGAVVIDNSSAF 97 (334)
T ss_pred HHHHhCCCEEEECCchh
Confidence 23456789999998654
No 282
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.27 E-value=0.048 Score=50.82 Aligned_cols=38 Identities=34% Similarity=0.483 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++.+|..++..|+++|++|+++.+.
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999999999999999999999999998765
No 283
>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]
Probab=94.25 E-value=0.059 Score=54.47 Aligned_cols=78 Identities=29% Similarity=0.391 Sum_probs=62.6
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC------------CCHHhhccCCcEEEEccC-CC---Ccc
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT------------KNPEEITRQADIIISAVG-QP---NMV 295 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t------------~~l~~~l~~ADIVIsAvG-~p---~~v 295 (371)
.+.++.||+.-|+|.|.+ |.-+|..+...|..|.-.+--+ -.++|.+.+||.|-.-++ .| +++
T Consensus 140 ~G~el~GKTLgvlG~GrI-GseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~li 218 (406)
T KOG0068|consen 140 LGWELRGKTLGVLGLGRI-GSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLL 218 (406)
T ss_pred eeeEEeccEEEEeecccc-hHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhcc
Confidence 467899999999999996 9999999999998877765432 257899999999987776 33 356
Q ss_pred cCC---CcCCCeEEEEee
Q 017438 296 RGS---WIKPGAVIIDVG 310 (371)
Q Consensus 296 ~~d---~ik~gavVIDvg 310 (371)
+.+ ..|+|..||++.
T Consensus 219 n~~tfA~mKkGVriIN~a 236 (406)
T KOG0068|consen 219 NDETFAKMKKGVRIINVA 236 (406)
T ss_pred CHHHHHHhhCCcEEEEec
Confidence 554 359999999986
No 284
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=94.24 E-value=0.098 Score=53.49 Aligned_cols=71 Identities=25% Similarity=0.338 Sum_probs=51.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------CCHHhhccCCcEEEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------KNPEEITRQADIIIS 287 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------~~l~~~l~~ADIVIs 287 (371)
+|.|||.|- ||.|+|.+|. .|.+|+.++++. .+..+...+||+||.
T Consensus 2 kI~VIGlGy-vGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGY-VGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCH-HHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 589999987 5999998777 489999997541 123345689999999
Q ss_pred ccCCCC----------ccc------CCCcCCCeEEEEeeecC
Q 017438 288 AVGQPN----------MVR------GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 288 AvG~p~----------~v~------~d~ik~gavVIDvgin~ 313 (371)
+++.|- .+. .. +++|.+||+-.+-+
T Consensus 80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~-~~~g~lVV~~STv~ 120 (388)
T PRK15057 80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYAVMVIKSTVP 120 (388)
T ss_pred eCCCCCccCCCCcChHHHHHHHHHHHh-cCCCCEEEEeeecC
Confidence 999761 111 12 47888998876644
No 285
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.24 E-value=0.069 Score=49.71 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=31.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
-.|+.++|+|+|.|++ |..++..|...|. ++++++.
T Consensus 17 ~~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 53 (200)
T TIGR02354 17 QKLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDF 53 (200)
T ss_pred HHHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECC
Confidence 3578899999999995 9999999999997 7888853
No 286
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.18 E-value=0.077 Score=49.43 Aligned_cols=37 Identities=30% Similarity=0.419 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998889999999999999999887544
No 287
>PRK06057 short chain dehydrogenase; Provisional
Probab=94.18 E-value=0.058 Score=50.27 Aligned_cols=38 Identities=29% Similarity=0.386 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++||+++|+|+++-+|+.++..|+++|++|+++.++.
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~ 41 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP 41 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 37899999999988899999999999999999887653
No 288
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.16 E-value=0.059 Score=51.54 Aligned_cols=34 Identities=18% Similarity=0.464 Sum_probs=29.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
.|++++|+|+|.|++ |..++..|...|. ++++++
T Consensus 21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD 55 (240)
T TIGR02355 21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLD 55 (240)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 468899999999996 9999999999995 788874
No 289
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.15 E-value=0.1 Score=54.29 Aligned_cols=122 Identities=19% Similarity=0.258 Sum_probs=73.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-CHHh--hccCCcEEEEccCCCCcccCCCc-CCCeEEEEeee
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-NPEE--ITRQADIIISAVGQPNMVRGSWI-KPGAVIIDVGI 311 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-~l~~--~l~~ADIVIsAvG~p~~v~~d~i-k~gavVIDvgi 311 (371)
++||+|+|+|.|.. |++++.+|.++|+.|++...+.. +..+ .+++ +++..-.+.+ .+.+ ....+|.--|+
T Consensus 6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~----~~~~~~~d~vV~SpgI 79 (468)
T PRK04690 6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALAD-AALLVETEAS----AQRLAAFDVVVKSPGI 79 (468)
T ss_pred cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhh-cCEEEeCCCC----hHHccCCCEEEECCCC
Confidence 47999999999987 99999999999999999875432 2221 2333 3222222211 1112 23456666666
Q ss_pred cCCCCCC----CCCCceeecccchh--hhhh-h--cceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 312 NPVEDAK----SPRGYRLVGDVCYE--EACE-V--ASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 312 n~~~~~~----~~~g~kl~GDVd~~--~v~~-~--a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++.. +- ...|-.+++++++. ...+ . ...+.-|-|-.|.-|+.-|+.++++.+
T Consensus 80 ~~~~-p~~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~ 140 (468)
T PRK04690 80 SPYR-PEALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAA 140 (468)
T ss_pred CCCC-HHHHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 5431 10 01233578888751 1111 0 011223669999999999999998764
No 290
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=94.15 E-value=0.055 Score=56.69 Aligned_cols=79 Identities=27% Similarity=0.372 Sum_probs=56.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHhhccCCcEEEEccCCCC--
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEITRQADIIISAVGQPN-- 293 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~~l~~ADIVIsAvG~p~-- 293 (371)
.|+||+|+|||.|.. |+.-|..|...|.+|++.-|. ..++.+.+++||+|+..++-..
T Consensus 33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~ 111 (487)
T PRK05225 33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHS 111 (487)
T ss_pred HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHH
Confidence 368999999999886 998888888889998865433 1357788999999999998321
Q ss_pred cccC---CCcCCCe-EEEEeeecCC
Q 017438 294 MVRG---SWIKPGA-VIIDVGINPV 314 (371)
Q Consensus 294 ~v~~---d~ik~ga-vVIDvgin~~ 314 (371)
.|-. ..+|+|+ +.+-=|+|..
T Consensus 112 ~v~~~i~p~LK~Ga~L~fsHGFni~ 136 (487)
T PRK05225 112 DVVRAVQPLMKQGAALGYSHGFNIV 136 (487)
T ss_pred HHHHHHHhhCCCCCEEEecCCceee
Confidence 2222 3567775 3444455543
No 291
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.12 E-value=0.11 Score=48.04 Aligned_cols=38 Identities=26% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++++|+++|.|+++-+|+.++..|+++|+.|+++.++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 45789999999999888999999999999999888654
No 292
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=94.11 E-value=0.077 Score=53.38 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=47.8
Q ss_pred cHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhccCCcEEEEccCCCCcc----c--CCCcCCCe
Q 017438 250 VGMPAALLLQREDATVSIVHSRT-------------------KNPEEITRQADIIISAVGQPNMV----R--GSWIKPGA 304 (371)
Q Consensus 250 VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l~~ADIVIsAvG~p~~v----~--~d~ik~ga 304 (371)
-|.++|..|++.|.+|++++++. .+..+..+++|+||+.++.++-+ . .+.+++|+
T Consensus 31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~Ga 110 (341)
T TIGR01724 31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENA 110 (341)
T ss_pred CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCC
Confidence 47788888888888888886531 24668899999999999976532 2 24568899
Q ss_pred EEEEeeecC
Q 017438 305 VIIDVGINP 313 (371)
Q Consensus 305 vVIDvgin~ 313 (371)
+|||.++..
T Consensus 111 IVID~STIs 119 (341)
T TIGR01724 111 VICNTCTVS 119 (341)
T ss_pred EEEECCCCC
Confidence 999998653
No 293
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.10 E-value=0.074 Score=49.32 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++++|+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4799999999999999999999999999999888764
No 294
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=94.10 E-value=0.14 Score=52.50 Aligned_cols=76 Identities=22% Similarity=0.370 Sum_probs=56.1
Q ss_pred cCCHHHHHHHHHHh---CCCCCCCEEEEEcCC----------------cccHHHHHHHhccCCCeEEEEeCCC-------
Q 017438 219 PCTPKGCIELLHRY---GFDIKGKRAVVIGRS----------------NIVGMPAALLLQREDATVSIVHSRT------- 272 (371)
Q Consensus 219 PcTa~gvi~lL~~~---~i~l~GK~vvVIG~s----------------~~VGkpla~lL~~~gAtVtv~h~~t------- 272 (371)
++++.-++..+.+. +-+++||+|+|-|.+ |-.|..+|..|..+||+|+++++..
T Consensus 163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~ 242 (390)
T TIGR00521 163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG 242 (390)
T ss_pred CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence 66777777666643 246999999999873 3359999999999999999987542
Q ss_pred ---------CCH-H----hhccCCcEEEEccCCCCc
Q 017438 273 ---------KNP-E----EITRQADIIISAVGQPNM 294 (371)
Q Consensus 273 ---------~~l-~----~~l~~ADIVIsAvG~p~~ 294 (371)
.++ + +...+.|++|.+++...+
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred cEEEEeccHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 123 2 223568999999987665
No 295
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=94.06 E-value=0.12 Score=51.20 Aligned_cols=93 Identities=22% Similarity=0.292 Sum_probs=62.1
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HHh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PEE 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~~ 277 (371)
+|.....+..+...+....|.+++|.|.|. +|..+++++...|+.|+++.+.... +.+
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 444344455555555555799999999866 6999999999999987766433211 122
Q ss_pred hccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 278 ITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
....+|++|.++|.+..+. -+.++++..++.+|..
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI 277 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 2335799999988654332 2467888888889864
No 296
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.05 E-value=0.12 Score=51.68 Aligned_cols=72 Identities=21% Similarity=0.154 Sum_probs=52.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------------CCCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------------TKNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------------t~~l~~~l~~ADI 284 (371)
++|.|||+|-+ |..+|..++..|..|++.+.. +.++++.+.+||+
T Consensus 8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 68999999775 999999999999999998653 2356678899999
Q ss_pred EEEccCCCCcccC-------CCcCCCeEEEEeeec
Q 017438 285 IISAVGQPNMVRG-------SWIKPGAVIIDVGIN 312 (371)
Q Consensus 285 VIsAvG~p~~v~~-------d~ik~gavVIDvgin 312 (371)
||-++.-..-++. +..++++ ||+..+.
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~a-IlaSnTS 120 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPDA-IIASSTS 120 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCCe-EEEECCC
Confidence 9998863211222 2356666 6665444
No 297
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.03 E-value=0.15 Score=47.20 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=31.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~ 271 (371)
-.|+.++|+|+|.|+ +|-.+++.|...|. ++++++..
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 346889999999999 59999999999996 79998643
No 298
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.03 E-value=0.075 Score=48.91 Aligned_cols=39 Identities=28% Similarity=0.296 Sum_probs=35.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+..
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~ 41 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK 41 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChH
Confidence 478999999999999999999999999999998887653
No 299
>PRK07060 short chain dehydrogenase; Provisional
Probab=94.03 E-value=0.064 Score=49.16 Aligned_cols=39 Identities=31% Similarity=0.455 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~ 43 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA 43 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999988889999999999999999887754
No 300
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.03 E-value=0.049 Score=51.12 Aligned_cols=40 Identities=28% Similarity=0.357 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
..+++||+++|.|+++-+|+.++..|+.+|++|.+..+..
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~ 44 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ 44 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4578999999999999999999999999999998887653
No 301
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.02 E-value=0.073 Score=53.50 Aligned_cols=37 Identities=22% Similarity=0.375 Sum_probs=31.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
+-.|++++|+|||.|++ |.+++..|...|. .+++++.
T Consensus 19 Q~~L~~~~VlIiG~Ggl-Gs~va~~La~aGvg~i~lvD~ 56 (338)
T PRK12475 19 QRKIREKHVLIVGAGAL-GAANAEALVRAGIGKLTIADR 56 (338)
T ss_pred HHhhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 34578999999999995 9999999999996 7888754
No 302
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.01 E-value=0.061 Score=49.79 Aligned_cols=36 Identities=31% Similarity=0.335 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 578999999999999999999999999999988764
No 303
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.00 E-value=0.12 Score=53.90 Aligned_cols=124 Identities=20% Similarity=0.283 Sum_probs=68.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC-HHhhccCC--cEEEEccCCCCcccCCCc-CCCeEEEEeee
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-PEEITRQA--DIIISAVGQPNMVRGSWI-KPGAVIIDVGI 311 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~-l~~~l~~A--DIVIsAvG~p~~v~~d~i-k~gavVIDvgi 311 (371)
+++|+|.|+|.|+. |+++|.+|.++|+.|++++.+... ..+.++.. .+-+. .|. ..++.+ ....+|+.-|+
T Consensus 5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~-~g~---~~~~~~~~~d~vv~sp~I 79 (498)
T PRK02006 5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFV-GGP---FDPALLDGVDLVALSPGL 79 (498)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEE-eCC---CchhHhcCCCEEEECCCC
Confidence 57899999999997 999999999999999999865321 11122222 11111 110 001112 12345555555
Q ss_pred cCCC-C--CC----CCCCceeecccchh-hhhhh------cceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 312 NPVE-D--AK----SPRGYRLVGDVCYE-EACEV------ASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 312 n~~~-~--~~----~~~g~kl~GDVd~~-~v~~~------a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++.. + +- ...|-++++++++- .+.+. ...+--|-|=-|.-|+..|+.++++.+
T Consensus 80 ~~~~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGKTTTt~ml~~iL~~~ 146 (498)
T PRK02006 80 SPLEAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGKTTTTALTGLLCERA 146 (498)
T ss_pred CCcccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 5421 0 00 00123566666541 11110 001112568889999999999998764
No 304
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=94.00 E-value=0.13 Score=50.78 Aligned_cols=53 Identities=28% Similarity=0.465 Sum_probs=41.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
++|.|||+|. ||..+|..|+.+|. +|++++.. +.++++ +++||+||.++|.
T Consensus 2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 4799999977 69999999998774 78888642 234444 7999999999996
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 53
No 305
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.96 E-value=0.12 Score=50.60 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=51.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||+|.+ |.++|..|+..|..|+++++.. .++ +.++
T Consensus 6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~ 83 (286)
T PRK07819 6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFA 83 (286)
T ss_pred cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhC
Confidence 48999999875 9999999999999999997542 233 4478
Q ss_pred CCcEEEEccCCCCcccC-------CCc-CCCeEEEEeee
Q 017438 281 QADIIISAVGQPNMVRG-------SWI-KPGAVIIDVGI 311 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~~-------d~i-k~gavVIDvgi 311 (371)
+||+||-++.--.-++. .+. ++++++..--.
T Consensus 84 ~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS 122 (286)
T PRK07819 84 DRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS 122 (286)
T ss_pred CCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 99999988763211221 345 77888776443
No 306
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.95 E-value=0.1 Score=48.77 Aligned_cols=54 Identities=17% Similarity=0.197 Sum_probs=41.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCC---Ce-EEEEeCC----------------CCCHHhhccCCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRED---AT-VSIVHSR----------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~g---At-Vtv~h~~----------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
+..+|.|||.|.+ |.+++..|.+.+ .+ +++++++ +.+.++.+.++|+||.+++.
T Consensus 3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~ 76 (245)
T PRK07634 3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP 76 (245)
T ss_pred CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence 4578999999886 999999888765 23 6666543 13456678899999999984
No 307
>PRK06125 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.069 Score=49.86 Aligned_cols=37 Identities=27% Similarity=0.433 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|.++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5789999999998888999999999999999998765
No 308
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=93.93 E-value=0.11 Score=54.59 Aligned_cols=53 Identities=23% Similarity=0.190 Sum_probs=43.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC----------------------------------CCHHhhccCCcE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT----------------------------------KNPEEITRQADI 284 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t----------------------------------~~l~~~l~~ADI 284 (371)
++|.|||.|.+ |.++|..|++.|..|++++++. .++.+.+++||+
T Consensus 5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 57999999886 9999999999999999987541 245567899999
Q ss_pred EEEccCCC
Q 017438 285 IISAVGQP 292 (371)
Q Consensus 285 VIsAvG~p 292 (371)
||.++...
T Consensus 84 Vieavpe~ 91 (495)
T PRK07531 84 IQESVPER 91 (495)
T ss_pred EEEcCcCC
Confidence 99988743
No 309
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.93 E-value=0.095 Score=50.80 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=47.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC----CeEEEEeCCC-----------------CCHHhhccCCcEEEEccCCCCc---
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED----ATVSIVHSRT-----------------KNPEEITRQADIIISAVGQPNM--- 294 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g----AtVtv~h~~t-----------------~~l~~~l~~ADIVIsAvG~p~~--- 294 (371)
.++.|||.|.+ |..++..|.+.| .+|+++.++. .+..+.++++|+||.++....+
T Consensus 2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp~~~~~v 80 (277)
T PRK06928 2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPPLAVLPL 80 (277)
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCHHHHHHH
Confidence 36899999886 999999998887 5788776542 2344567889999999874321
Q ss_pred cc--CCCcCCCeEEEEe
Q 017438 295 VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 295 v~--~d~ik~gavVIDv 309 (371)
+. ...++++.+||.+
T Consensus 81 l~~l~~~l~~~~~ivS~ 97 (277)
T PRK06928 81 LKDCAPVLTPDRHVVSI 97 (277)
T ss_pred HHHHHhhcCCCCEEEEE
Confidence 11 0234556566544
No 310
>PRK05872 short chain dehydrogenase; Provisional
Probab=93.92 E-value=0.049 Score=52.50 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||+++|.|+++-+|+.++..|.++|++|.++.++.
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE 43 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999988899999999999999999887653
No 311
>PRK06223 malate dehydrogenase; Reviewed
Probab=93.92 E-value=0.14 Score=49.89 Aligned_cols=53 Identities=28% Similarity=0.424 Sum_probs=41.5
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~ 291 (371)
++|.|||+|. ||..++..|+..|. +|.+++.. +.+. +.+++||+||.++|.
T Consensus 3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence 5899999966 59999999988764 88888643 1234 458999999999986
Q ss_pred CC
Q 017438 292 PN 293 (371)
Q Consensus 292 p~ 293 (371)
|.
T Consensus 81 p~ 82 (307)
T PRK06223 81 PR 82 (307)
T ss_pred CC
Confidence 64
No 312
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.92 E-value=0.11 Score=53.64 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+|.|+|.|+. |+++|.+|.++|++|++++..
T Consensus 7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~ 41 (460)
T PRK01390 7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDN 41 (460)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCC
Confidence 67999999999997 999999999999999999865
No 313
>PRK08223 hypothetical protein; Validated
Probab=93.89 E-value=0.1 Score=51.61 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=30.6
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
-.|+.++|+|||.|+. |-+++..|...|. ++++++
T Consensus 23 ~kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD 58 (287)
T PRK08223 23 QRLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIAD 58 (287)
T ss_pred HHHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEe
Confidence 3578899999999995 9999999999995 788874
No 314
>PRK09242 tropinone reductase; Provisional
Probab=93.89 E-value=0.051 Score=50.60 Aligned_cols=38 Identities=26% Similarity=0.366 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..++||+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999999998888999999999999999988765
No 315
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=93.89 E-value=0.12 Score=52.05 Aligned_cols=71 Identities=27% Similarity=0.349 Sum_probs=54.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC----------------------------CCCHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR----------------------------TKNPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~----------------------------t~~l~~~l~~ADIVIsAvG 290 (371)
++|.|||+|.- |.++|..|.+.|..|++--++ |.|+.+.+.+||+||-+++
T Consensus 2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 57999999886 999999999999888887542 3588899999999999998
Q ss_pred CCCc---cc--CCCcCCCeEEEEee
Q 017438 291 QPNM---VR--GSWIKPGAVIIDVG 310 (371)
Q Consensus 291 ~p~~---v~--~d~ik~gavVIDvg 310 (371)
.-.+ ++ ...+++++.++-+.
T Consensus 81 s~~~r~v~~~l~~~l~~~~~iv~~s 105 (329)
T COG0240 81 SQALREVLRQLKPLLLKDAIIVSAT 105 (329)
T ss_pred hHHHHHHHHHHhhhccCCCeEEEEe
Confidence 6332 11 14567777776653
No 316
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=93.88 E-value=0.12 Score=50.05 Aligned_cols=89 Identities=17% Similarity=-0.006 Sum_probs=57.8
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------CCHHhhc---
Q 017438 223 KGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------KNPEEIT--- 279 (371)
Q Consensus 223 ~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------~~l~~~l--- 279 (371)
...+..|.+..---.|.+|+|.|+++.+|..+++++...|++|+...++. .++.+.+
T Consensus 124 ~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~ 203 (325)
T TIGR02825 124 LTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKA 203 (325)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHh
Confidence 33344443333234689999999877789999999999999877654321 1222221
Q ss_pred --cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 280 --RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 280 --~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+..|+++.++|.+.+- --+.++++..++.+|.
T Consensus 204 ~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~ 238 (325)
T TIGR02825 204 SPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 238 (325)
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecc
Confidence 2368888888865331 1245788888888885
No 317
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=93.87 E-value=0.092 Score=52.78 Aligned_cols=76 Identities=24% Similarity=0.375 Sum_probs=52.6
Q ss_pred CEEEEEcCCcccHHHHHHHhccC-CCeEE-EEeCCC---C--------------------CHHhhccCCcEEEEccCCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRE-DATVS-IVHSRT---K--------------------NPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~-gAtVt-v~h~~t---~--------------------~l~~~l~~ADIVIsAvG~p~ 293 (371)
.+|.|+|++|.+|+-++.+|.++ +.++. ++.++. + +.++...++|+||.|++...
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~ 80 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGV 80 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchH
Confidence 37999999888999999999877 56766 544321 1 11233458999999997431
Q ss_pred c--ccCCCcCCCeEEEEeeecCC
Q 017438 294 M--VRGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 294 ~--v~~d~ik~gavVIDvgin~~ 314 (371)
. +-+...+.|..|||.+-...
T Consensus 81 s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 81 SAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred HHHHHHHHHhCCCEEEeCChhhh
Confidence 1 22234567999999997653
No 318
>PRK09186 flagellin modification protein A; Provisional
Probab=93.87 E-value=0.063 Score=49.67 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~ 38 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK 38 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh
Confidence 5799999999998899999999999999998886653
No 319
>PRK08264 short chain dehydrogenase; Validated
Probab=93.84 E-value=0.08 Score=48.49 Aligned_cols=38 Identities=29% Similarity=0.293 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t 272 (371)
++++|+++|+|+++-+|+.++..|+++|+ +|+++.+..
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~ 41 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP 41 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh
Confidence 46889999999988899999999999999 999988754
No 320
>PRK07774 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.079 Score=48.82 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|++..|.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998888999999999999999998875
No 321
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=93.75 E-value=0.13 Score=53.86 Aligned_cols=53 Identities=28% Similarity=0.271 Sum_probs=44.2
Q ss_pred ccCCHHHHHHH----HHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEE-EEeCC
Q 017438 218 IPCTPKGCIEL----LHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVS-IVHSR 271 (371)
Q Consensus 218 ~PcTa~gvi~l----L~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVt-v~h~~ 271 (371)
.+.|..|++.. |++.+.+++||+|+|=|.|+ ||..++..|.+.||+|+ ++.++
T Consensus 213 ~eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 213 PEATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CcccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence 35788886654 55678899999999999988 59999999999999877 77665
No 322
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=93.75 E-value=0.081 Score=44.52 Aligned_cols=75 Identities=23% Similarity=0.222 Sum_probs=47.2
Q ss_pred EEEEEcCCcccHHHHHHHhcc-CCCeEEEE-eCCC---CC-------H--------H-hhc--cCCcEEEEccCCCCc--
Q 017438 240 RAVVIGRSNIVGMPAALLLQR-EDATVSIV-HSRT---KN-------P--------E-EIT--RQADIIISAVGQPNM-- 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~-~gAtVtv~-h~~t---~~-------l--------~-~~l--~~ADIVIsAvG~p~~-- 294 (371)
++.|+|+++.+|+-++..|.+ .+.+++.+ .++. +. + . +.+ .++|+||.+++....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~ 80 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE 80 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHH
Confidence 477889777778888887777 46665555 2211 00 0 0 112 489999999985432
Q ss_pred -cc--CCCcCCCeEEEEeeecCC
Q 017438 295 -VR--GSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 295 -v~--~d~ik~gavVIDvgin~~ 314 (371)
+. ....++|.+|||++....
T Consensus 81 ~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 81 IAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred HHHHHHhhhcCCCEEEECCcccc
Confidence 11 123578999999996543
No 323
>PRK06841 short chain dehydrogenase; Provisional
Probab=93.72 E-value=0.095 Score=48.51 Aligned_cols=38 Identities=34% Similarity=0.522 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|..++..|+++|++|+++.|.
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998889999999999999999988764
No 324
>PRK05854 short chain dehydrogenase; Provisional
Probab=93.72 E-value=0.057 Score=52.74 Aligned_cols=38 Identities=37% Similarity=0.400 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|++.-+|+.++..|+++|++|+++.|+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789999999999889999999999999999998765
No 325
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.71 E-value=0.16 Score=49.10 Aligned_cols=36 Identities=25% Similarity=0.117 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-+||+|+|.|+++.+|+.++..|+++|.+|+.+.++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999999999999999999866543
No 326
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=93.71 E-value=0.14 Score=47.91 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++||.++|.|+++-+|+.++..|.++|++|..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence 578999999999998999999999999999887654
No 327
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=93.70 E-value=0.24 Score=47.26 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=60.4
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHH---
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPE--- 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~--- 276 (371)
++.+...+..++...+ -.|.+++|.|.++.+|..+++++...|++|++..++. .++.
T Consensus 122 ~~~~~ta~~~~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 200 (324)
T cd08292 122 IAMPLSALMLLDFLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKV 200 (324)
T ss_pred cccHHHHHHHHHhhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHH
Confidence 3334444444544332 3589999999988889999999999999877664321 1111
Q ss_pred -hhc--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 277 -EIT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 277 -~~l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+.+ +..|+|+.++|.+..- --+.++++..++++|.
T Consensus 201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEec
Confidence 222 2589999988875321 1235678888899885
No 328
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.69 E-value=0.11 Score=50.88 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC--CeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED--ATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~ 271 (371)
++||+++|.|+++.+|+.++..|+++| ++|+++.+.
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 579999999999999999999999886 688877543
No 329
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=93.68 E-value=0.12 Score=50.88 Aligned_cols=77 Identities=29% Similarity=0.450 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC---C------------------CCHH--hhccCCcEEEEccCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---T------------------KNPE--EITRQADIIISAVGQP 292 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~---t------------------~~l~--~~l~~ADIVIsAvG~p 292 (371)
..|++|+|+|.|. +|..+++++...|+.|+++.++ . .++. .....+|+||.++|.+
T Consensus 171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 249 (355)
T cd08230 171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP 249 (355)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence 4799999999865 6999999999999998887652 1 1111 1123579999999986
Q ss_pred Cccc--CCCcCCCeEEEEeeecC
Q 017438 293 NMVR--GSWIKPGAVIIDVGINP 313 (371)
Q Consensus 293 ~~v~--~d~ik~gavVIDvgin~ 313 (371)
..+. -+.++++..++-+|...
T Consensus 250 ~~~~~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 250 PLAFEALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHHHHHHHHccCCcEEEEEecCC
Confidence 5432 24578887788888643
No 330
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.66 E-value=0.14 Score=50.48 Aligned_cols=52 Identities=17% Similarity=0.302 Sum_probs=41.1
Q ss_pred EEEEEcCCcccHHHHHHHhccCC--CeEEEEeCCCC-------CH----------------HhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED--ATVSIVHSRTK-------NP----------------EEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t~-------~l----------------~~~l~~ADIVIsAvG~p 292 (371)
+|.|||+|. ||.+++..|+.+| ..|.++++... ++ .+.+++||+||.++|.|
T Consensus 2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 699999976 6999999999998 47888876531 01 24578999999999975
No 331
>PRK06196 oxidoreductase; Provisional
Probab=93.65 E-value=0.066 Score=52.02 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 567899999999998889999999999999999988765
No 332
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.65 E-value=0.06 Score=49.85 Aligned_cols=39 Identities=36% Similarity=0.500 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++++|.++|.|+++-+|+.++..|.++|++|.++.++.
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~ 42 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL 42 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999999999999999999999999887653
No 333
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=93.64 E-value=0.11 Score=46.58 Aligned_cols=37 Identities=35% Similarity=0.554 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+|+|||.|.. |--++..|.+.|.+|++++|+.
T Consensus 164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~~ 200 (203)
T PF13738_consen 164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRSP 200 (203)
T ss_dssp GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS-
T ss_pred hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecCC
Confidence 678999999999998 9999999999999999999864
No 334
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.60 E-value=0.084 Score=49.49 Aligned_cols=37 Identities=16% Similarity=0.312 Sum_probs=33.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3579999999999998999999999999999988754
No 335
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=93.59 E-value=0.11 Score=51.90 Aligned_cols=75 Identities=16% Similarity=0.209 Sum_probs=53.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCCC----CCHHhhccCCcEEEEccCCC---CcccCCCcCCCeEEEEee
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSRT----KNPEEITRQADIIISAVGQP---NMVRGSWIKPGAVIIDVG 310 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~t----~~l~~~l~~ADIVIsAvG~p---~~v~~d~ik~gavVIDvg 310 (371)
-+|.|+|++|..|.-+..+|.++. .++.-..++. .+.++.+.++|++|.|++.- .++ +...+.|..|||.+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp~~~s~~~~-~~~~~~g~~VIDlS 80 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAV-SLVDNPNTCIIDAS 80 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhhcCCCEEEECCCHHHHHHHH-HHHHhCCCEEEECC
Confidence 379999999999999999999875 4544443332 24455668899999998642 122 22335689999998
Q ss_pred ecCC
Q 017438 311 INPV 314 (371)
Q Consensus 311 in~~ 314 (371)
-.+.
T Consensus 81 adfR 84 (310)
T TIGR01851 81 TAYR 84 (310)
T ss_pred hHHh
Confidence 6654
No 336
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.58 E-value=0.14 Score=47.19 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=31.5
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~ 35 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE 35 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999987753
No 337
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=93.58 E-value=0.074 Score=48.70 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999888765
No 338
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.56 E-value=0.17 Score=51.89 Aligned_cols=121 Identities=17% Similarity=0.272 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC-HHhhccC--CcEEEEccCCCCcccCCCc-CCCeEEEEeee
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN-PEEITRQ--ADIIISAVGQPNMVRGSWI-KPGAVIIDVGI 311 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~-l~~~l~~--ADIVIsAvG~p~~v~~d~i-k~gavVIDvgi 311 (371)
+.+|+++|+|.|++ |+.+|..|.++|+.|++.+..... ..+.++. .-+.+. .|. .+.+.+ ....+|+--|+
T Consensus 3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~-~g~---~~~~~~~~~d~vv~spgi 77 (445)
T PRK04308 3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFY-TGR---LKDALDNGFDILALSPGI 77 (445)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEE-eCC---CCHHHHhCCCEEEECCCC
Confidence 57999999999986 999999999999999998754321 1111211 011110 010 000001 12344444444
Q ss_pred cCCCCCC---CCCCceeecccchh-hhh----hhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 312 NPVEDAK---SPRGYRLVGDVCYE-EAC----EVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 312 n~~~~~~---~~~g~kl~GDVd~~-~v~----~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
++..--- ...|-.+.++.++- ... ...-+ |-|=-|.-|+..|+.++++.+
T Consensus 78 ~~~~p~~~~a~~~~i~v~~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~li~~iL~~~ 135 (445)
T PRK04308 78 SERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIA---ITGSNGKTTVTSLVGYLCIKC 135 (445)
T ss_pred CCCCHHHHHHHHcCCcEEEhHHHHHHhhhcCCCCEEE---EECCCcHHHHHHHHHHHHHHc
Confidence 4320000 00122566666652 111 12233 558889999999999988764
No 339
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=93.56 E-value=0.068 Score=50.05 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999998888999999999999999988765
No 340
>PRK06179 short chain dehydrogenase; Provisional
Probab=93.55 E-value=0.14 Score=47.96 Aligned_cols=35 Identities=29% Similarity=0.217 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999999999999999988765
No 341
>PRK07478 short chain dehydrogenase; Provisional
Probab=93.55 E-value=0.068 Score=49.65 Aligned_cols=37 Identities=38% Similarity=0.517 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|.++|++|.+..++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999889999999999999999988765
No 342
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=93.54 E-value=0.19 Score=48.18 Aligned_cols=93 Identities=17% Similarity=0.020 Sum_probs=59.9
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC-------------------CCCHHhhc
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------------TKNPEEIT 279 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~-------------------t~~l~~~l 279 (371)
|+.....+..|.+..---.|.+++|.|+++.||..+++++...|++|+.+.+. ..++.+.+
T Consensus 125 ~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v 204 (329)
T cd08294 125 GMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEAL 204 (329)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence 44444455555443333469999999987778999999999999988765432 12222211
Q ss_pred -----cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 280 -----RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 280 -----~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
+..|+|+.++|.+.+- --+.++++..++.+|.
T Consensus 205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence 2368888888863321 1245677777788774
No 343
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=93.54 E-value=0.1 Score=50.05 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=30.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
-.|+.++|+|||.|++ |.+++..|...|. ++++++
T Consensus 28 ~~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD 63 (245)
T PRK05690 28 EKLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVD 63 (245)
T ss_pred HHhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence 3578999999999985 9999999999995 788874
No 344
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=93.52 E-value=0.064 Score=50.63 Aligned_cols=38 Identities=37% Similarity=0.553 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|+++-+|+.++..|+++|++|.+..++
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999998888999999999999999988775
No 345
>PRK09291 short chain dehydrogenase; Provisional
Probab=93.51 E-value=0.11 Score=48.05 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=30.7
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6789999999999999999999999999887664
No 346
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.48 E-value=0.2 Score=49.86 Aligned_cols=52 Identities=21% Similarity=0.412 Sum_probs=40.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-------------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
.||.|||+|. ||..+|..|+..+. ++.+++.+. .+. +.+++|||||.++|.
T Consensus 4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-SVTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-HHhCCCCEEEECCCC
Confidence 4899999977 59999999988873 577775431 233 458999999999996
Q ss_pred C
Q 017438 292 P 292 (371)
Q Consensus 292 p 292 (371)
|
T Consensus 82 ~ 82 (312)
T cd05293 82 R 82 (312)
T ss_pred C
Confidence 4
No 347
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.46 E-value=0.079 Score=49.05 Aligned_cols=37 Identities=38% Similarity=0.513 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++.+|+.++..|+++|++|.++.+.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 4679999999999999999999999999999888664
No 348
>PRK07825 short chain dehydrogenase; Provisional
Probab=93.46 E-value=0.086 Score=49.61 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4789999999999999999999999999999888765
No 349
>PRK06194 hypothetical protein; Provisional
Probab=93.46 E-value=0.078 Score=50.18 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999998888999999999999999988764
No 350
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=93.45 E-value=0.23 Score=50.05 Aligned_cols=93 Identities=20% Similarity=0.286 Sum_probs=62.2
Q ss_pred cCCHHHHHHHHHHhCCC-CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---------------------HH
Q 017438 219 PCTPKGCIELLHRYGFD-IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------PE 276 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~-l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---------------------l~ 276 (371)
+|.....+..+...+.. -.|+.|+|.|.|. +|..+++++...|++|+++.+.... +.
T Consensus 159 ~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~ 237 (375)
T PLN02178 159 LCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK 237 (375)
T ss_pred hccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHH
Confidence 44444455555555443 3699999999866 6999999999999987776433111 11
Q ss_pred hhccCCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 277 EITRQADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 277 ~~l~~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+..+|+||.++|.+..+. -+.++++..++.+|..
T Consensus 238 ~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~ 275 (375)
T PLN02178 238 EAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP 275 (375)
T ss_pred HhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccC
Confidence 22234799999998764332 2457888888888864
No 351
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=93.43 E-value=0.17 Score=52.42 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=54.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-----------------------------CHHhhccCCcEEEEcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-----------------------------NPEEITRQADIIISAV 289 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-----------------------------~l~~~l~~ADIVIsAv 289 (371)
-+|.|||-|- ||.|+|..|.. +.+|+.++.+.. .-.+.+++||++|+++
T Consensus 7 mkI~vIGlGy-vGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V 84 (425)
T PRK15182 7 VKIAIIGLGY-VGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV 84 (425)
T ss_pred CeEEEECcCc-chHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence 5799999988 59999999876 689999875421 1123578999999999
Q ss_pred CCCC---------ccc------CCCcCCCeEEEEeeecCC
Q 017438 290 GQPN---------MVR------GSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 290 G~p~---------~v~------~d~ik~gavVIDvgin~~ 314 (371)
|.|. .+. ...+++|++|||-.+-+.
T Consensus 85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~p 124 (425)
T PRK15182 85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYP 124 (425)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 9772 121 134688999999876553
No 352
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.43 E-value=0.1 Score=48.11 Aligned_cols=37 Identities=38% Similarity=0.528 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~ 38 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLND 38 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5789999999999999999999999999999887653
No 353
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.41 E-value=0.12 Score=48.05 Aligned_cols=37 Identities=27% Similarity=0.375 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999989999999999999999888664
No 354
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.38 E-value=0.094 Score=47.94 Aligned_cols=38 Identities=32% Similarity=0.464 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|..++..|.++|++|++..++.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~ 39 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE 39 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999999999999999887754
No 355
>PRK08589 short chain dehydrogenase; Validated
Probab=93.38 E-value=0.081 Score=50.13 Aligned_cols=37 Identities=32% Similarity=0.391 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 4689999999998888999999999999999988765
No 356
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.37 E-value=0.11 Score=48.45 Aligned_cols=37 Identities=32% Similarity=0.420 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|+|+++-+|+.++..|.++|+.|.++.++
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999999999999999999999998887664
No 357
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=93.34 E-value=0.13 Score=51.90 Aligned_cols=69 Identities=22% Similarity=0.334 Sum_probs=52.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCC--------CeEEEEeC-----C----------------------------CCCHHhh
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED--------ATVSIVHS-----R----------------------------TKNPEEI 278 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g--------AtVtv~h~-----~----------------------------t~~l~~~ 278 (371)
+|+|||+|.- |.++|..|.++| .+|++..+ . +.|+++.
T Consensus 1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5899999885 999999999888 78888854 1 2467788
Q ss_pred ccCCcEEEEccCCCCc---cc--CCCcCCCeEEEEe
Q 017438 279 TRQADIIISAVGQPNM---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~---v~--~d~ik~gavVIDv 309 (371)
+++||+||.+++...+ +. ..+++++..+|-+
T Consensus 80 l~~ADiIIlAVPs~~i~~vl~~l~~~l~~~~~iVs~ 115 (342)
T TIGR03376 80 AKGADILVFVIPHQFLEGICKQLKGHVKPNARAISC 115 (342)
T ss_pred HhcCCEEEEECChHHHHHHHHHHHhhcCCCCEEEEE
Confidence 9999999999985321 11 1356777777765
No 358
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.33 E-value=0.094 Score=49.47 Aligned_cols=37 Identities=27% Similarity=0.443 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+.+|++|+++.++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999998765
No 359
>PRK06500 short chain dehydrogenase; Provisional
Probab=93.29 E-value=0.078 Score=48.73 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 3679999999999999999999999999998877654
No 360
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.29 E-value=0.11 Score=48.65 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|++.-+|+.++..|+++|++|.++.++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 5789999999999999999999999999999887653
No 361
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=93.28 E-value=0.36 Score=44.21 Aligned_cols=94 Identities=30% Similarity=0.418 Sum_probs=63.5
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh-
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI- 278 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~- 278 (371)
|+.....+..++....-..|++++|.|.|. +|..++.++...|++|+.+.++. .+..+.
T Consensus 116 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 194 (271)
T cd05188 116 PEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEEL 194 (271)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHH
Confidence 444444555565555445799999999999 89999999999999988775531 111111
Q ss_pred ----ccCCcEEEEccCCCCcc--cCCCcCCCeEEEEeeecC
Q 017438 279 ----TRQADIIISAVGQPNMV--RGSWIKPGAVIIDVGINP 313 (371)
Q Consensus 279 ----l~~ADIVIsAvG~p~~v--~~d~ik~gavVIDvgin~ 313 (371)
-+..|++|.++|.+..+ -.+.++++..++++|...
T Consensus 195 ~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 195 RLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 24579999888863332 224567788888888543
No 362
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.28 E-value=0.2 Score=48.20 Aligned_cols=35 Identities=26% Similarity=0.218 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+||+|+|.|+++-+|+.++..|+++|.+|+++.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47999999998889999999999999998876543
No 363
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.27 E-value=0.12 Score=46.84 Aligned_cols=38 Identities=37% Similarity=0.472 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++.+|+++|.|+++-+|+.++..|.++|++|+++.|+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~ 39 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE 39 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35689999999999999999999999999999888764
No 364
>PLN02427 UDP-apiose/xylose synthase
Probab=93.26 E-value=0.18 Score=50.47 Aligned_cols=59 Identities=22% Similarity=0.236 Sum_probs=45.3
Q ss_pred hCCCCCCCEEEEEcCCcccHHHHHHHhccC-CCeEEEEeCCCC----------------------------CHHhhccCC
Q 017438 232 YGFDIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRTK----------------------------NPEEITRQA 282 (371)
Q Consensus 232 ~~i~l~GK~vvVIG~s~~VGkpla~lL~~~-gAtVtv~h~~t~----------------------------~l~~~l~~A 282 (371)
-|-.++.++|+|.|+.|.+|+.++..|+++ |..|..+.+... .+++.++++
T Consensus 8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 345677789999999999999999999988 588887764321 134556789
Q ss_pred cEEEEccC
Q 017438 283 DIIISAVG 290 (371)
Q Consensus 283 DIVIsAvG 290 (371)
|+||..++
T Consensus 88 d~ViHlAa 95 (386)
T PLN02427 88 DLTINLAA 95 (386)
T ss_pred CEEEEccc
Confidence 99997665
No 365
>PRK07814 short chain dehydrogenase; Provisional
Probab=93.24 E-value=0.11 Score=48.88 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+.+|++|.++.++
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999989999999999999999888765
No 366
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=93.24 E-value=0.082 Score=49.21 Aligned_cols=36 Identities=28% Similarity=0.353 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence 678999999998889999999999999999988765
No 367
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=93.23 E-value=0.22 Score=48.52 Aligned_cols=93 Identities=15% Similarity=0.035 Sum_probs=59.6
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------CCHHh
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------KNPEE 277 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------~~l~~ 277 (371)
+|.....+..|.+..---.|.+|+|.|+++.||..+++++..+|++|+...+.. .++.+
T Consensus 133 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~ 212 (338)
T cd08295 133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDA 212 (338)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHH
Confidence 444445555565443334699999999977789999999999999877654321 12222
Q ss_pred hc-----cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeee
Q 017438 278 IT-----RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 278 ~l-----~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgi 311 (371)
.+ +.+|+++.++|...+- --+.++++..++.+|.
T Consensus 213 ~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 213 ALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred HHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence 11 2468888877753221 1245777777778774
No 368
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.23 E-value=0.095 Score=50.53 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=28.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
++|.|||.|.+ |.+++..|+..|.+|++++.
T Consensus 4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~ 34 (282)
T PRK05808 4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDI 34 (282)
T ss_pred cEEEEEccCHH-HHHHHHHHHHCCCceEEEeC
Confidence 57999999875 99999999999999999874
No 369
>CHL00194 ycf39 Ycf39; Provisional
Probab=93.23 E-value=0.15 Score=49.70 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=40.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVG 290 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG 290 (371)
+|+|.|++|.+|+.++..|+++|.+|++..|+.. .+.+.++.+|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 7999999999999999999999999998876521 23455777888887655
No 370
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.18 E-value=0.2 Score=50.02 Aligned_cols=54 Identities=17% Similarity=0.356 Sum_probs=40.5
Q ss_pred EEEEEcCCcccHHHHHHHhccCC-C------eEEEEeCCC--------------------------CCHHhhccCCcEEE
Q 017438 240 RAVVIGRSNIVGMPAALLLQRED-A------TVSIVHSRT--------------------------KNPEEITRQADIII 286 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~g-A------tVtv~h~~t--------------------------~~l~~~l~~ADIVI 286 (371)
+|+|+|+++.||..++..|...+ + ++.+..... .+..+.+++|||||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 79999996667999999998765 2 266654432 23457899999999
Q ss_pred EccCCCC
Q 017438 287 SAVGQPN 293 (371)
Q Consensus 287 sAvG~p~ 293 (371)
.+.|.|.
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9999753
No 371
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.18 E-value=0.11 Score=47.77 Aligned_cols=38 Identities=24% Similarity=0.476 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|.++|.|+++-+|+.++..|+++|++|.+++|+.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~ 41 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE 41 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999998763
No 372
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.17 E-value=0.21 Score=49.94 Aligned_cols=52 Identities=29% Similarity=0.454 Sum_probs=40.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-C-eEEEEeCCC--------------------------CCHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-A-TVSIVHSRT--------------------------KNPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-A-tVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG 290 (371)
++|+|||+|+ ||.++|++|..++ + ++.+..... .+ .+.++.|||||-+.|
T Consensus 1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 4899999977 5999999998887 3 677765431 12 577999999998888
Q ss_pred CC
Q 017438 291 QP 292 (371)
Q Consensus 291 ~p 292 (371)
.|
T Consensus 79 ~p 80 (313)
T COG0039 79 VP 80 (313)
T ss_pred CC
Confidence 54
No 373
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.17 E-value=0.099 Score=47.76 Aligned_cols=38 Identities=37% Similarity=0.450 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE-eCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV-HSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~-h~~t 272 (371)
++.+|+++|+|+++-+|+.++..|+++|++|++. .++.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~ 40 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE 40 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4789999999998889999999999999999888 6653
No 374
>PRK05876 short chain dehydrogenase; Provisional
Probab=93.17 E-value=0.1 Score=49.87 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3789999999999999999999999999999988765
No 375
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=93.16 E-value=0.21 Score=48.45 Aligned_cols=76 Identities=17% Similarity=0.311 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCCCCHH-----------h-hccCCcEEEEccCCCCccc--CCCc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRTKNPE-----------E-ITRQADIIISAVGQPNMVR--GSWI 300 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t~~l~-----------~-~l~~ADIVIsAvG~p~~v~--~d~i 300 (371)
..|++++|+|.|. ||..+++++...|++ |.++..+...++ + .-..+|+||-++|.+..+. -+.+
T Consensus 143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l 221 (308)
T TIGR01202 143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRL 221 (308)
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHHHHHHHHhh
Confidence 4688999999876 599999988889997 444533221111 1 1134799999999876543 2678
Q ss_pred CCCeEEEEeeec
Q 017438 301 KPGAVIIDVGIN 312 (371)
Q Consensus 301 k~gavVIDvgin 312 (371)
+++..++-+|..
T Consensus 222 ~~~G~iv~~G~~ 233 (308)
T TIGR01202 222 AKGGEIVLAGFY 233 (308)
T ss_pred hcCcEEEEEeec
Confidence 888888888864
No 376
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=93.10 E-value=0.09 Score=52.94 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccC---CCeEEEEeCCC---------------CCHHhhc-cCCcEEEEccCCCC--cc
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQRE---DATVSIVHSRT---------------KNPEEIT-RQADIIISAVGQPN--MV 295 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~---gAtVtv~h~~t---------------~~l~~~l-~~ADIVIsAvG~p~--~v 295 (371)
++.+|.|||+++.+|+-+..+|.++ ..++....+.. .++.+.. .++|+++.|+|..- -+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~~ 82 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAAY 82 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHHH
Confidence 5678999999999999999999984 35666665431 1222222 67899999997421 12
Q ss_pred cCCCcCCCeEEEEeeecCC
Q 017438 296 RGSWIKPGAVIIDVGINPV 314 (371)
Q Consensus 296 ~~d~ik~gavVIDvgin~~ 314 (371)
-++..+.|+.|||.+-.+.
T Consensus 83 ~~~~~~~g~~VIDlS~~fR 101 (336)
T PRK08040 83 AEEATNAGCLVIDSSGLFA 101 (336)
T ss_pred HHHHHHCCCEEEECChHhc
Confidence 2334567999999986654
No 377
>PRK12743 oxidoreductase; Provisional
Probab=93.09 E-value=0.2 Score=46.75 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 3689999999999999999999999999988754
No 378
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=93.08 E-value=0.45 Score=48.09 Aligned_cols=77 Identities=25% Similarity=0.385 Sum_probs=54.2
Q ss_pred ccCCHHHHHHHHHHhC------CCCCCCEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC------------------C
Q 017438 218 IPCTPKGCIELLHRYG------FDIKGKRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR------------------T 272 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~------i~l~GK~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~------------------t 272 (371)
+|+++.-.++.|-+.. -.=+|+.|+|+|+|+.||..+.+++...| +.|+.+.+. +
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKD 211 (347)
T ss_pred CchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCC
Confidence 4665555555555555 44579999999999999999999999999 555555433 2
Q ss_pred CCHHhhccC-----CcEEEEccCCCCc
Q 017438 273 KNPEEITRQ-----ADIIISAVGQPNM 294 (371)
Q Consensus 273 ~~l~~~l~~-----ADIVIsAvG~p~~ 294 (371)
.|..+.+++ -|+|+-++|.+.+
T Consensus 212 ~~~~e~~kk~~~~~~DvVlD~vg~~~~ 238 (347)
T KOG1198|consen 212 ENVVELIKKYTGKGVDVVLDCVGGSTL 238 (347)
T ss_pred HHHHHHHHhhcCCCccEEEECCCCCcc
Confidence 344455544 7999988887543
No 379
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=93.03 E-value=0.19 Score=50.06 Aligned_cols=57 Identities=23% Similarity=0.396 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCCCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
-.-+++=-||-|.+ |.+++..|++.|.+|||.+++. ..-.|..+++|+||+-++.|.
T Consensus 33 ~s~~~iGFIGLG~M-G~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~ 103 (327)
T KOG0409|consen 33 PSKTRIGFIGLGNM-GSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPK 103 (327)
T ss_pred cccceeeEEeeccc-hHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChH
Confidence 35788999999986 9999999999999999999873 234588999999999999775
No 380
>PRK10727 DNA-binding transcriptional regulator GalR; Provisional
Probab=92.98 E-value=4.4 Score=39.39 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=53.1
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHhHhccCCCc-------------eEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEE
Q 017438 81 KVIDGKA-VAKQIRDEITGEVSRMKDAIGVVP-------------GLAVILVG-DRKDSATYVRNKKKACQSVGINSFEV 145 (371)
Q Consensus 81 ~ildGk~-la~~i~~~ik~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~~~~~GI~~~~~ 145 (371)
++|+|+. ++++-|+.|.+.+++| |.+| .+++|.-. .++--...++...+.|++.|......
T Consensus 20 rvLn~~~~Vs~~tr~rV~~~a~el----gY~pn~~ar~l~~~~~~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~ 95 (343)
T PRK10727 20 RVINNSPKASEASRLAVHSAMESL----SYHPNANARALAQQSTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIG 95 (343)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCCCHHHHhhhhCCCCeEEEEeCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 4677764 6666666666655554 4444 45555432 23333344567888999999887655
Q ss_pred eCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q 017438 146 HLPEDTSEQEVLKHISVFNDDPSVHGILVQ 175 (371)
Q Consensus 146 ~lp~~v~~~el~~~I~~LN~D~~V~GIlVq 175 (371)
... -+.++..+.++.+.. .+++||++.
T Consensus 96 ~~~--~~~~~~~~~i~~l~~-~~vdgiIi~ 122 (343)
T PRK10727 96 NGY--HNEQKERQAIEQLIR-HRCAALVVH 122 (343)
T ss_pred eCC--CCHHHHHHHHHHHHh-cCCCEEEEe
Confidence 443 233444566666654 479999996
No 381
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=92.98 E-value=0.22 Score=48.04 Aligned_cols=69 Identities=25% Similarity=0.355 Sum_probs=48.7
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
+|+|||+|.+ |..++..|.+.|.+|+++.+.. .+..+....+|+||.++..+.
T Consensus 2 kI~IiG~G~i-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~~ 80 (305)
T PRK12921 2 RIAVVGAGAV-GGTFGGRLLEAGRDVTFLVRPKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAYQ 80 (305)
T ss_pred eEEEECCCHH-HHHHHHHHHHCCCceEEEecHHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecccC
Confidence 6899999885 9999999999999999887610 122333478999999988654
Q ss_pred c---cc--CCCcCCCeEEEEe
Q 017438 294 M---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 294 ~---v~--~d~ik~gavVIDv 309 (371)
+ +. ..+++++.+||-+
T Consensus 81 ~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 81 LDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred HHHHHHHHHhhcCCCCEEEEe
Confidence 2 11 1245667777655
No 382
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.96 E-value=0.12 Score=48.50 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|++ .-+|+.++..|+++|++|.++.++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 789999999997 335999999999999999988654
No 383
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=92.93 E-value=0.21 Score=46.79 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=43.8
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~l~~ADIVIsAvG~p 292 (371)
.++.|||+++-+|+-++..+.++|.+||-.-|+. ..+.+.+..-|+||+|.|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 4789999999999999999999999999886652 12335677889999998854
No 384
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=92.91 E-value=0.13 Score=52.21 Aligned_cols=35 Identities=34% Similarity=0.558 Sum_probs=30.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
.+++++|+|+|.|++ |..++..|...|. ++++++.
T Consensus 132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~ 167 (376)
T PRK08762 132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDH 167 (376)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 468899999999995 9999999999997 7888864
No 385
>PRK06139 short chain dehydrogenase; Provisional
Probab=92.91 E-value=0.078 Score=52.61 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++++|.++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~ 41 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDE 41 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47899999999988889999999999999999987753
No 386
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=92.91 E-value=0.15 Score=47.06 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=41.6
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------------CCHHhhccCCcEEEEccCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
|+|+|+.|.+|++++..|+..+.+|+++.|.. ..|.+.++.+|.||..++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 68999988889999999999999999988763 1345678888888888874
No 387
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=92.90 E-value=0.26 Score=48.70 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=33.6
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
..-+++|+|+|.|+.|-+|..++..|+++|.+|+.+.+
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~ 47 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN 47 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 35578899999999999999999999999999987754
No 388
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.89 E-value=0.2 Score=46.02 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
++++|+++|.|+++-+|+.++..|+++|+.|++..+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK 38 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 367899999999999999999999999999876543
No 389
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=92.89 E-value=0.15 Score=47.79 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=30.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
-.|+.++|+|||.|++ |..++..|...|. ++++++.
T Consensus 24 ~~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 60 (212)
T PRK08644 24 EKLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDF 60 (212)
T ss_pred HHHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 3468899999999995 9999999999996 5888753
No 390
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=92.89 E-value=0.13 Score=50.02 Aligned_cols=40 Identities=35% Similarity=0.409 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK 273 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~ 273 (371)
..++||.++|-|++.-+|+++|..|++.||+|+++.|+.+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEE 43 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4689999999999998999999999999999999988743
No 391
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.87 E-value=0.095 Score=48.06 Aligned_cols=37 Identities=24% Similarity=0.383 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++|++++|+|.++-+|..++..|.++|++|+++.++
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999997778999999999999999888765
No 392
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=92.85 E-value=0.13 Score=58.74 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=31.3
Q ss_pred HHhhccCCcEEEEccC----CCCcccCC-C---cCCCe----EEEEeeecC
Q 017438 275 PEEITRQADIIISAVG----QPNMVRGS-W---IKPGA----VIIDVGINP 313 (371)
Q Consensus 275 l~~~l~~ADIVIsAvG----~p~~v~~d-~---ik~ga----vVIDvgin~ 313 (371)
++++++.||+||+++- .|.+|+.+ + +|+|. +|+||.++.
T Consensus 291 ~~~~~~~advlIn~i~~~~~~P~lvt~~~~~~~mk~G~~~l~vI~DVs~D~ 341 (1042)
T PLN02819 291 HEKIAPYASVIVNCMYWEKRFPRLLTTKQLQDLTRKGGCPLVGVCDITCDI 341 (1042)
T ss_pred HHHhHhhCCEEEeeeecCCCCCceeCHHHHHHhhcCCCccceEEEEEccCC
Confidence 4578899999999984 47789887 4 47787 999999774
No 393
>PRK06114 short chain dehydrogenase; Provisional
Probab=92.82 E-value=0.16 Score=47.33 Aligned_cols=39 Identities=33% Similarity=0.494 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.+++||.++|.|.++-+|+.++..|.++|++|.++.++.
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999899999999999999999987653
No 394
>PRK07326 short chain dehydrogenase; Provisional
Probab=92.81 E-value=0.1 Score=47.73 Aligned_cols=36 Identities=33% Similarity=0.412 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.|++++|+|+++-+|+.++..|+++|++|.++.|+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 568999999998889999999999999999998765
No 395
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=92.80 E-value=0.24 Score=48.10 Aligned_cols=74 Identities=20% Similarity=0.127 Sum_probs=51.0
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC--------------------CCHHhhc-----cCCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT--------------------KNPEEIT-----RQADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t--------------------~~l~~~l-----~~ADIVIsAvG~ 291 (371)
|.+|+|.|+++.+|..+.+++...|+ .|+.+.++. .++.+.+ +..|+++.++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 48999999977789999999999998 677764321 1222221 247888888886
Q ss_pred CCcc-cCCCcCCCeEEEEeee
Q 017438 292 PNMV-RGSWIKPGAVIIDVGI 311 (371)
Q Consensus 292 p~~v-~~d~ik~gavVIDvgi 311 (371)
+.+- .-+.++++..++++|.
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHHHHHHHHhccCCEEEEEee
Confidence 5431 1245788888888884
No 396
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=92.80 E-value=0.14 Score=48.42 Aligned_cols=52 Identities=19% Similarity=0.287 Sum_probs=42.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC------HHhhccCC--cEEEEccCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN------PEEITRQA--DIIISAVGQ 291 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~------l~~~l~~A--DIVIsAvG~ 291 (371)
+|+|+|+++.+|+.++..|+++|.+|+++.+...| +++.+... |+||..+|.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 48999998889999999999999999988776433 44556655 999988774
No 397
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=92.79 E-value=0.086 Score=45.31 Aligned_cols=33 Identities=27% Similarity=0.533 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
+.++|+|+|.|++ |..++..|...|. .+++++.
T Consensus 1 r~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~ 34 (135)
T PF00899_consen 1 RNKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDD 34 (135)
T ss_dssp HT-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEES
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHhCCCceeecCC
Confidence 3589999999985 9999999999997 7999864
No 398
>PLN02602 lactate dehydrogenase
Probab=92.78 E-value=0.29 Score=49.58 Aligned_cols=52 Identities=25% Similarity=0.423 Sum_probs=40.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-------------------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~ 291 (371)
++|.|||+|. ||..+|..|+.++. ++.+++... .+ .+.+++|||||.+.|.
T Consensus 38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d-y~~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD-YAVTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC-HHHhCCCCEEEECCCC
Confidence 6999999977 69999999988873 577775431 12 2458999999999996
Q ss_pred C
Q 017438 292 P 292 (371)
Q Consensus 292 p 292 (371)
|
T Consensus 116 ~ 116 (350)
T PLN02602 116 R 116 (350)
T ss_pred C
Confidence 5
No 399
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=92.69 E-value=0.13 Score=47.29 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=32.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|.+..++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 579999999999999999999999999999887554
No 400
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=92.69 E-value=0.19 Score=49.46 Aligned_cols=59 Identities=17% Similarity=0.158 Sum_probs=45.1
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC--------------------------CHHhhccCCcEEE
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK--------------------------NPEEITRQADIII 286 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------------~l~~~l~~ADIVI 286 (371)
+-+-.+++|+|.|+++.+|+.++..|+++|++|+++.+... .+.+.+++.|+||
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 34557899999999999999999999999999988754321 1234456789999
Q ss_pred EccCC
Q 017438 287 SAVGQ 291 (371)
Q Consensus 287 sAvG~ 291 (371)
..++.
T Consensus 85 h~A~~ 89 (353)
T PLN02896 85 HVAAS 89 (353)
T ss_pred ECCcc
Confidence 77764
No 401
>PLN00198 anthocyanidin reductase; Provisional
Probab=92.68 E-value=0.29 Score=47.76 Aligned_cols=36 Identities=22% Similarity=0.200 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+.++|+|+|.|+++-+|+.++..|+++|++|.++.+
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r 41 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR 41 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 467999999999999999999999999999876543
No 402
>PRK12742 oxidoreductase; Provisional
Probab=92.66 E-value=0.16 Score=46.39 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.++||+++|.|+++-+|+.++..|+++|++|.+..+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 468999999999888899999999999999877643
No 403
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=92.64 E-value=0.23 Score=48.89 Aligned_cols=51 Identities=25% Similarity=0.431 Sum_probs=40.5
Q ss_pred EEEEcCCcccHHHHHHHhccCC--CeEEEEeCCC-------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRED--ATVSIVHSRT-------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~g--AtVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
+.|||+|. ||.+++..|+.+| .++++++.+. .+ .+.+++|||||.++|.|.
T Consensus 1 i~iiGaG~-VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGN-VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence 47999988 6999999999888 4788886431 12 467899999999999753
No 404
>PRK05875 short chain dehydrogenase; Provisional
Probab=92.62 E-value=0.14 Score=48.07 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999998888999999999999999988764
No 405
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=92.61 E-value=0.19 Score=50.38 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------C------HHhhccCCcEEEEccC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------N------PEEITRQADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------~------l~~~l~~ADIVIsAvG 290 (371)
++|+|+|.|+.|-+|+.++..|.++|.+|+.+.+... | +.+.++++|+||..++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 6899999999999999999999999999998865311 1 2234567899997765
No 406
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=92.61 E-value=0.13 Score=50.97 Aligned_cols=58 Identities=29% Similarity=0.509 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE----------------eCCC----------CCHHhhccCCcEEEEc
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV----------------HSRT----------KNPEEITRQADIIISA 288 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~----------------h~~t----------~~l~~~l~~ADIVIsA 288 (371)
.-.+.+|.|+|+++-+|.|++++|. .+-.|+-. |-.| +.|++.++.||+||-+
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP 103 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence 3467799999999989999998665 44334333 2222 4688999999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 104 AGVPR 108 (345)
T KOG1494|consen 104 AGVPR 108 (345)
T ss_pred CCCCC
Confidence 99653
No 407
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=92.59 E-value=0.18 Score=45.78 Aligned_cols=37 Identities=32% Similarity=0.353 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++|+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5688999999999999999999999999999777654
No 408
>PRK06198 short chain dehydrogenase; Provisional
Probab=92.54 E-value=0.14 Score=47.63 Aligned_cols=38 Identities=24% Similarity=0.327 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t 272 (371)
.+++|+++|.|+++-+|+.++..|.++|++ |+++.++.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~ 41 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA 41 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH
Confidence 478999999999988999999999999998 88887653
No 409
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=92.53 E-value=0.14 Score=51.44 Aligned_cols=112 Identities=21% Similarity=0.250 Sum_probs=63.5
Q ss_pred EEEEcCCcccHHHHHHHhccCC-C-eEEEEeCCC-------------------------CCHHhhccCCcEEEEccCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQRED-A-TVSIVHSRT-------------------------KNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~g-A-tVtv~h~~t-------------------------~~l~~~l~~ADIVIsAvG~p~ 293 (371)
|+|+|+ |.+|+.++..|.+++ . +|++..++. .+|.+.++++|+||+++|...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 688999 446999999888886 3 788887652 126678999999999998641
Q ss_pred c--ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHHHHHHHHHHH
Q 017438 294 M--VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAMLLSNTLTSAK 365 (371)
Q Consensus 294 ~--v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amLl~n~v~a~~ 365 (371)
- +-...++-|.-.||..+-. ...-. +++.++.++..-=.-=|.-|--+.++...+++.+.
T Consensus 80 ~~~v~~~~i~~g~~yvD~~~~~----------~~~~~--l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~ 141 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTSYVT----------EEMLA--LDEEAKEAGVTALPGCGFDPGLSNLLARYAADELD 141 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS-HH----------HHHHH--CHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCeeccchhH----------HHHHH--HHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh
Confidence 1 2223456688888854300 00111 11223333321101225666677788777776554
No 410
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.51 E-value=0.28 Score=50.10 Aligned_cols=104 Identities=21% Similarity=0.252 Sum_probs=67.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHH--------------hhccCCcEEEEccCCCCc---ccCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE--------------EITRQADIIISAVGQPNM---VRGSW 299 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~--------------~~l~~ADIVIsAvG~p~~---v~~d~ 299 (371)
+.++|+|||-|.+ |..+|.+|.++|++|+.+..+...+. ....++|++|...|.+.. +. +-
T Consensus 2 ~~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~~~~l~-~A 79 (418)
T PRK00683 2 GLQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKEHPWVQ-AA 79 (418)
T ss_pred CCCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCCcHHHH-HH
Confidence 4578999999997 99999999999999999886543211 123567888887775421 11 11
Q ss_pred cCCCeEEEEeeecCCCCCCCCCCceeecccchhhhh-----hhcceeccCCCCccHHHHHHHHHHHHHHH
Q 017438 300 IKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEAC-----EVASAITPVPGGVGPMTIAMLLSNTLTSA 364 (371)
Q Consensus 300 ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~-----~~a~~iTPVPGGVGp~T~amLl~n~v~a~ 364 (371)
.+.|.. ++.|.++.... ...-+ |-|-.|.-|+.-|+.++++.+
T Consensus 80 ~~~g~~-------------------vv~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~ml~~iL~~~ 127 (418)
T PRK00683 80 IASHIP-------------------VVTDIQLAFQTPEFTRYPSLG---ITGSTGKTTTILFLEHLLKRL 127 (418)
T ss_pred HHCCCc-------------------EEEHHHHHHhhhhcCCCCEEE---EECCCChHHHHHHHHHHHHHc
Confidence 233432 33333321100 01122 558899999999999998764
No 411
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=92.50 E-value=0.15 Score=53.85 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=29.1
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|.|||.|.+ |.++|..|+..|..|++.+++
T Consensus 6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999875 999999999999999999865
No 412
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.49 E-value=0.19 Score=47.37 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCC---cccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRS---NIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s---~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|++ + +|+.++..|+++|++|.++.++
T Consensus 6 ~~~~~k~~lItGas~g~G-IG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQS-IAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECCCCCCc-HHHHHHHHHHHcCCEEEEEeCC
Confidence 45789999999986 5 5999999999999999988665
No 413
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=92.47 E-value=0.17 Score=51.44 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=31.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
-.|++++|+|||.|++ |.+++..|...|. ++++++
T Consensus 37 ~~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD 72 (370)
T PRK05600 37 ERLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLID 72 (370)
T ss_pred HHhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 4578999999999996 9999999999995 888885
No 414
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=92.46 E-value=0.42 Score=46.41 Aligned_cols=93 Identities=25% Similarity=0.324 Sum_probs=61.7
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCCC-------------------CC---
Q 017438 218 IPCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSRT-------------------KN--- 274 (371)
Q Consensus 218 ~PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~t-------------------~~--- 274 (371)
++|.....+..++..++ ..|.+|+|+|.|. +|..+++++...|+. |+++.+.. .+
T Consensus 145 l~~~~~ta~~~l~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~ 222 (339)
T cd08239 145 LLCGIGTAYHALRRVGV-SGRDTVLVVGAGP-VGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQE 222 (339)
T ss_pred hcchHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHH
Confidence 34444444555555544 3599999999865 699999999999998 87765431 11
Q ss_pred HHhhcc--CCcEEEEccCCCCccc--CCCcCCCeEEEEeeec
Q 017438 275 PEEITR--QADIIISAVGQPNMVR--GSWIKPGAVIIDVGIN 312 (371)
Q Consensus 275 l~~~l~--~ADIVIsAvG~p~~v~--~d~ik~gavVIDvgin 312 (371)
+.+.+. .+|+||.++|.+..+. -+.++++..++-+|..
T Consensus 223 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 223 IRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 112222 5899999998765432 2457887788888854
No 415
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=92.45 E-value=0.22 Score=50.53 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=34.5
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+...+|++|+|+|+++-+|+.++..|+++|..|+.+.|.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 455789999999999999999999999999999888764
No 416
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=92.44 E-value=0.16 Score=53.64 Aligned_cols=71 Identities=17% Similarity=0.285 Sum_probs=51.4
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------------------------------CCHHhhcc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------------------------------KNPEEITR 280 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------------------------------~~l~~~l~ 280 (371)
++|.|||+|.+ |.++|..|+..|..|++.+++. .++. .+.
T Consensus 8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~-~~~ 85 (507)
T PRK08268 8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA-DLA 85 (507)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-HhC
Confidence 68999999875 9999999999999999997652 1232 357
Q ss_pred CCcEEEEccCCCCcccC-------CCcCCCeEEE-Eeee
Q 017438 281 QADIIISAVGQPNMVRG-------SWIKPGAVII-DVGI 311 (371)
Q Consensus 281 ~ADIVIsAvG~p~~v~~-------d~ik~gavVI-Dvgi 311 (371)
+||+||.++.-..-++. ...++++++. |..+
T Consensus 86 ~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntSt 124 (507)
T PRK08268 86 DCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSS 124 (507)
T ss_pred CCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 99999999875332222 2346777663 5554
No 417
>PRK05086 malate dehydrogenase; Provisional
Probab=92.44 E-value=0.4 Score=47.59 Aligned_cols=55 Identities=22% Similarity=0.389 Sum_probs=39.3
Q ss_pred CEEEEEcCCcccHHHHHHHhcc-C--CCeEEEEeCC-----------------------CCCHHhhccCCcEEEEccCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQR-E--DATVSIVHSR-----------------------TKNPEEITRQADIIISAVGQP 292 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~-~--gAtVtv~h~~-----------------------t~~l~~~l~~ADIVIsAvG~p 292 (371)
++++|||+++.+|..++..|.. . +..++++.+. ..++.+.++++|+||.+.|.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 5899999955579999987743 2 2356665421 124567789999999999975
Q ss_pred C
Q 017438 293 N 293 (371)
Q Consensus 293 ~ 293 (371)
+
T Consensus 81 ~ 81 (312)
T PRK05086 81 R 81 (312)
T ss_pred C
Confidence 4
No 418
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.43 E-value=0.17 Score=48.31 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~--~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|+|. -+|+.+|..|+++|++|.++.++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCc
Confidence 6899999999983 35999999999999999988654
No 419
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=92.41 E-value=0.33 Score=49.54 Aligned_cols=85 Identities=21% Similarity=0.288 Sum_probs=59.6
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCCC-----------CCHHhhccCCcE
Q 017438 225 CIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSRT-----------KNPEEITRQADI 284 (371)
Q Consensus 225 vi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~t-----------~~l~~~l~~ADI 284 (371)
+++.+.++-.+++||+|.|+|-+ +.-...++..|.++|++|.+..-.- .++.+.++.||+
T Consensus 300 ~~~~~~~~l~~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~ 379 (411)
T TIGR03026 300 VVEKILDLLGPLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADA 379 (411)
T ss_pred HHHHHHHHhhcccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCE
Confidence 34444333246899999999952 2236788999999999999885431 467788999999
Q ss_pred EEEccCCCCcccCCC--cCC---CeEEEEe
Q 017438 285 IISAVGQPNMVRGSW--IKP---GAVIIDV 309 (371)
Q Consensus 285 VIsAvG~p~~v~~d~--ik~---gavVIDv 309 (371)
||..+..+.|-..+| +++ .-+|||.
T Consensus 380 ~v~~t~~~~~~~~~~~~~~~~~~~~~v~D~ 409 (411)
T TIGR03026 380 LVILTDHDEFKDLDLEKIKDLMKGKVVVDT 409 (411)
T ss_pred EEEecCCHHHhccCHHHHHHhcCCCEEEeC
Confidence 999999887743332 321 3478883
No 420
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=92.36 E-value=0.19 Score=46.74 Aligned_cols=37 Identities=32% Similarity=0.370 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 4789999999999989999999999999999988764
No 421
>PLN02778 3,5-epimerase/4-reductase
Probab=92.35 E-value=0.35 Score=47.10 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=41.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCC---HHhhcc--CCcEEEEccCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---PEEITR--QADIIISAVGQ 291 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~---l~~~l~--~ADIVIsAvG~ 291 (371)
.++|+|.|++|.+|..++..|+++|.+|+.....-.+ +...++ +.|+||.+++.
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 4789999999999999999999999998865443333 333333 68999977763
No 422
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=92.35 E-value=0.24 Score=49.47 Aligned_cols=78 Identities=26% Similarity=0.349 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC--------------CCHHhhccCCcEEEEccCC---CCcccC-
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT--------------KNPEEITRQADIIISAVGQ---PNMVRG- 297 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t--------------~~l~~~l~~ADIVIsAvG~---p~~v~~- 297 (371)
|+||+|+|||.|.- |++=|+.|...|.+|+|--+.. .+.++..++||+|..-++- +.....
T Consensus 16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 68999999999886 9999999999999999987652 3567899999999999873 222221
Q ss_pred --CCcCCCe-EEEEeeecCC
Q 017438 298 --SWIKPGA-VIIDVGINPV 314 (371)
Q Consensus 298 --d~ik~ga-vVIDvgin~~ 314 (371)
..+++|+ +.+-=|+|..
T Consensus 95 I~p~Lk~G~aL~FaHGfNih 114 (338)
T COG0059 95 IAPNLKEGAALGFAHGFNIH 114 (338)
T ss_pred hhhhhcCCceEEecccccee
Confidence 1355564 4455555554
No 423
>PRK06197 short chain dehydrogenase; Provisional
Probab=92.32 E-value=0.1 Score=50.24 Aligned_cols=37 Identities=30% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999887654
No 424
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=92.32 E-value=0.25 Score=46.97 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=41.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC---CeEEEEeCCC---------------CCHHhhccCCcEEEEccCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED---ATVSIVHSRT---------------KNPEEITRQADIIISAVGQ 291 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g---AtVtv~h~~t---------------~~l~~~l~~ADIVIsAvG~ 291 (371)
.++.|||.|.+ |..++..|.+.| ..|++++++. .+..+.+.++|+||.++..
T Consensus 3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 47999999885 999999998887 6788887752 2445567899999988863
No 425
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=92.31 E-value=0.15 Score=50.85 Aligned_cols=76 Identities=14% Similarity=0.182 Sum_probs=51.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCC-CeEEEEeCC-CCC---HHhhccCCcEEEEccCCCC--cccCCCcCCCeEEEEeee
Q 017438 239 KRAVVIGRSNIVGMPAALLLQRED-ATVSIVHSR-TKN---PEEITRQADIIISAVGQPN--MVRGSWIKPGAVIIDVGI 311 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~g-AtVtv~h~~-t~~---l~~~l~~ADIVIsAvG~p~--~v~~d~ik~gavVIDvgi 311 (371)
-+|.|||+++.+|.-+..+|.++. .++.-..++ ..+ .++...++|+||.|++.-- -+-+...+.|..|||.+-
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~~~~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VIDlSa 82 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKDAAARRELLNAADVAILCLPDDAAREAVALIDNPATRVIDAST 82 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCcccCchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 478999999999999999998876 233333222 112 2334578999999996311 122233467999999997
Q ss_pred cCC
Q 017438 312 NPV 314 (371)
Q Consensus 312 n~~ 314 (371)
.+.
T Consensus 83 dfR 85 (313)
T PRK11863 83 AHR 85 (313)
T ss_pred hhh
Confidence 764
No 426
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.30 E-value=0.23 Score=46.86 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=31.3
Q ss_pred CCCCCCEEEEEcCC--cccHHHHHHHhccCCCeEEEEeC
Q 017438 234 FDIKGKRAVVIGRS--NIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 234 i~l~GK~vvVIG~s--~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++||.++|.|++ .-+|+.++..|+++|++|+++.+
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence 35789999999985 23599999999999999998854
No 427
>PRK12827 short chain dehydrogenase; Provisional
Probab=92.30 E-value=0.19 Score=45.89 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
++++|+++|.|+++.+|+.++..|+++|++|++..+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 467899999999999999999999999999888543
No 428
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=92.28 E-value=0.2 Score=53.92 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+||.++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999998888999999999999999988664
No 429
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=92.28 E-value=0.44 Score=49.28 Aligned_cols=53 Identities=34% Similarity=0.310 Sum_probs=43.5
Q ss_pred cccCCHHHHHH----HHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 217 FIPCTPKGCIE----LLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 217 ~~PcTa~gvi~----lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
-.+.|..|+.. .++..+.+|+|++|+|=|.|+ ||.-++..|...||+|+.+.-
T Consensus 182 r~~aTg~Gv~~~~~~a~~~~g~~l~G~rVaVQG~GN-Vg~~aa~~l~~~GAkvva~sd 238 (411)
T COG0334 182 RSEATGYGVFYAIREALKALGDDLEGARVAVQGFGN-VGQYAAEKLHELGAKVVAVSD 238 (411)
T ss_pred CCcccceehHHHHHHHHHHcCCCcCCCEEEEECccH-HHHHHHHHHHHcCCEEEEEEc
Confidence 34678888554 445667789999999999999 599999999999999888753
No 430
>PLN02214 cinnamoyl-CoA reductase
Probab=92.24 E-value=0.32 Score=48.11 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++|+|+|.|+++.+|+.++..|+++|..|+.+.+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 42 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR 42 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 57899999999988999999999999999887654
No 431
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=92.22 E-value=2.9 Score=40.10 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=56.1
Q ss_pred eeeecHH----HHHHHHHHHHHHHHHhH-------h--ccCCCceEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEEe
Q 017438 81 KVIDGKA----VAKQIRDEITGEVSRMK-------D--AIGVVPGLAVILVG-DRKDSATYVRNKKKACQSVGINSFEVH 146 (371)
Q Consensus 81 ~ildGk~----la~~i~~~ik~~v~~l~-------~--~~g~~P~LaiI~vG-~d~aS~~Yv~~k~k~~~~~GI~~~~~~ 146 (371)
++|+|++ ++++-++.+.+.+++|- . +.+....+++|.-. +++--....+...+.|++.|.+.....
T Consensus 19 rvLn~~~~~~~Vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~l~~gi~~~~~~~g~~~~~~~ 98 (328)
T PRK11303 19 YVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLIIPDLENTSYARIAKYLERQARQRGYQLLIAC 98 (328)
T ss_pred HHHcCCCCCCCcCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence 4677874 77777777777766651 0 01223345555432 233334445678889999999987654
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCccEEEEeC
Q 017438 147 LPEDTSEQEVLKHISVFNDDPSVHGILVQL 176 (371)
Q Consensus 147 lp~~v~~~el~~~I~~LN~D~~V~GIlVql 176 (371)
... +.+...+.++.+.. .+++||++.-
T Consensus 99 ~~~--~~~~~~~~~~~l~~-~~vdgiIi~~ 125 (328)
T PRK11303 99 SDD--QPDNEMRCAEHLLQ-RQVDALIVST 125 (328)
T ss_pred CCC--CHHHHHHHHHHHHH-cCCCEEEEcC
Confidence 432 33334456666654 3799999853
No 432
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=92.21 E-value=0.2 Score=50.56 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=30.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEe
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVH 269 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h 269 (371)
..|++++|+|||.|++ |.+++..|...|. ++++++
T Consensus 24 ~~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD 59 (355)
T PRK05597 24 QSLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIID 59 (355)
T ss_pred HHHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEe
Confidence 3568899999999996 9999999999995 788875
No 433
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=92.20 E-value=0.18 Score=46.03 Aligned_cols=37 Identities=35% Similarity=0.531 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++++|+++|.|+++-+|+.++..|.++|+.|++..++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 5789999999999989999999999999988776544
No 434
>PRK06914 short chain dehydrogenase; Provisional
Probab=92.20 E-value=0.19 Score=47.32 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
++|.++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~ 37 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNP 37 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCH
Confidence 578999999999999999999999999998886653
No 435
>PRK08643 acetoin reductase; Validated
Probab=92.19 E-value=0.19 Score=46.66 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||.++|+|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999999999999888765
No 436
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=92.18 E-value=0.64 Score=43.52 Aligned_cols=94 Identities=22% Similarity=0.227 Sum_probs=61.7
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CC----H
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KN----P 275 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~----l 275 (371)
+|....++..+.+..---+|++++|.|.++.+|..++.++..+|++|++..++. .+ +
T Consensus 126 ~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 205 (325)
T cd08253 126 GIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205 (325)
T ss_pred hhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHH
Confidence 444444555555533334799999999877789999999999999987765421 11 1
Q ss_pred Hhhc--cCCcEEEEccCCCCc-ccCCCcCCCeEEEEeeec
Q 017438 276 EEIT--RQADIIISAVGQPNM-VRGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 276 ~~~l--~~ADIVIsAvG~p~~-v~~d~ik~gavVIDvgin 312 (371)
.+.+ +..|+++..+|.... ...++++++..++++|..
T Consensus 206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 206 LAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred HHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence 1222 357888888776432 123556777788888864
No 437
>PRK06181 short chain dehydrogenase; Provisional
Probab=92.15 E-value=0.23 Score=46.28 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=30.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999998889999999999999999998765
No 438
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.14 E-value=0.2 Score=47.00 Aligned_cols=38 Identities=18% Similarity=0.110 Sum_probs=32.5
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-...+++++|+|+++-+|+.++..|+++|++|+.+.|+
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence 34678999999998888999999999999999876543
No 439
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=92.11 E-value=0.22 Score=46.02 Aligned_cols=78 Identities=26% Similarity=0.386 Sum_probs=47.5
Q ss_pred CCCCEEEEEcC----------------CcccHHHHHHHhccCCCeEEEEeCCCC--------------------CHHhhc
Q 017438 236 IKGKRAVVIGR----------------SNIVGMPAALLLQREDATVSIVHSRTK--------------------NPEEIT 279 (371)
Q Consensus 236 l~GK~vvVIG~----------------s~~VGkpla~lL~~~gAtVtv~h~~t~--------------------~l~~~l 279 (371)
|+||+|+|-+. ||-.|..+|..+..+||+|+++|..+. .+.+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 46777777643 355699999999999999999987631 233567
Q ss_pred cCCcEEEEccCCCCccc----CCCcCC---CeEEEEeeecC
Q 017438 280 RQADIIISAVGQPNMVR----GSWIKP---GAVIIDVGINP 313 (371)
Q Consensus 280 ~~ADIVIsAvG~p~~v~----~d~ik~---gavVIDvgin~ 313 (371)
+++|++|.++-...|-. ..-+|+ ....+.+--+|
T Consensus 81 ~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~p 121 (185)
T PF04127_consen 81 PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTP 121 (185)
T ss_dssp GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-G
T ss_pred CcceeEEEecchhheeehhccccccccccCcceEEEEEeCh
Confidence 88999998887666522 234663 35777776665
No 440
>PRK06444 prephenate dehydrogenase; Provisional
Probab=92.09 E-value=0.25 Score=46.18 Aligned_cols=58 Identities=16% Similarity=0.258 Sum_probs=42.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCHHhhccCCcEEEEccCCCCcccCCCcCC-CeEEEEeee
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIISAVGQPNMVRGSWIKP-GAVIIDVGI 311 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l~~~l~~ADIVIsAvG~p~~v~~d~ik~-gavVIDvgi 311 (371)
+++|||..|-+|+-++..|.+.|..|+ +++||+||.|++.... .+++++ ..+|+|+|.
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~------------~~~~DlVilavPv~~~--~~~i~~~~~~v~Dv~S 60 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVY------------IKKADHAFLSVPIDAA--LNYIESYDNNFVEISS 60 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEE------------ECCCCEEEEeCCHHHH--HHHHHHhCCeEEeccc
Confidence 689999955569999999999999886 4789999999984321 112211 237889985
No 441
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.08 E-value=0.21 Score=47.36 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 4689999999999999999999999999999988764
No 442
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=92.07 E-value=0.19 Score=52.17 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+|+|||+|.. |--++..|.+.|++||+.-|+
T Consensus 171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs 207 (443)
T COG2072 171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS 207 (443)
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence 5899999999999998 999999999999999999765
No 443
>PRK12937 short chain dehydrogenase; Provisional
Probab=92.00 E-value=0.23 Score=45.44 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+++||+++|.|+++-+|+.++..|.++|++|+++.+.
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 4689999999998889999999999999998877543
No 444
>PRK08226 short chain dehydrogenase; Provisional
Probab=91.99 E-value=0.22 Score=46.42 Aligned_cols=37 Identities=22% Similarity=0.362 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 3679999999999999999999999999999988765
No 445
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=91.98 E-value=0.2 Score=46.65 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|+|+++-+|+.++..|.++|++|.++.++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4689999999999999999999999999998887654
No 446
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.97 E-value=0.22 Score=48.43 Aligned_cols=39 Identities=38% Similarity=0.384 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
..+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 467899999999999999999999999999999888653
No 447
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=91.95 E-value=0.3 Score=47.72 Aligned_cols=51 Identities=27% Similarity=0.413 Sum_probs=38.4
Q ss_pred EEEEcCCcccHHHHHHHhccCCC-eEEEEeCC--------------------------CCCHHhhccCCcEEEEccCCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDA-TVSIVHSR--------------------------TKNPEEITRQADIIISAVGQPN 293 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~--------------------------t~~l~~~l~~ADIVIsAvG~p~ 293 (371)
|.|||+|. ||..++..|+.+|. +|++++.. +.+. +.+++||+||.++|.|.
T Consensus 1 I~IIGaG~-vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGN-VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCCC
Confidence 57899966 59999998887764 88887643 1343 45899999999998653
No 448
>PRK05993 short chain dehydrogenase; Provisional
Probab=91.91 E-value=0.19 Score=47.74 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|.++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999998888999999999999999998775
No 449
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=91.90 E-value=0.38 Score=49.10 Aligned_cols=111 Identities=16% Similarity=0.149 Sum_probs=67.7
Q ss_pred CEEEEEcCCcccHHHHHHHhc-cCCC---eEEEEeCC---------------CCCHHh--hccCCcEEEEccCCC--Ccc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQ-REDA---TVSIVHSR---------------TKNPEE--ITRQADIIISAVGQP--NMV 295 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~-~~gA---tVtv~h~~---------------t~~l~~--~l~~ADIVIsAvG~p--~~v 295 (371)
|+|.|||+-+.||+-+..+|. +++. ++....+. .+++.+ ..++.||++.++|.- .-+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~~~v~~~~~~~~~~~vDivffa~g~~~s~~~ 80 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDIDALKALDIIITCQGGDYTNEI 80 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCcceEEcCcccccccCCCEEEEcCCHHHHHHH
Confidence 579999999999999999888 5553 33333321 012322 467899999999852 123
Q ss_pred cCCCcCCC--eEEEEeeecCCCCCCCCCCceeecccchhhhhhh--cce--eccCCCCccHHHHHHH
Q 017438 296 RGSWIKPG--AVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEV--ASA--ITPVPGGVGPMTIAML 356 (371)
Q Consensus 296 ~~d~ik~g--avVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~--a~~--iTPVPGGVGp~T~amL 356 (371)
-+...+.| ++|||-.....-++.-+ -++-.|+.+.+.+. .++ +. .|+ ..|+.|+
T Consensus 81 ~p~~~~aG~~~~VIDnSSa~Rmd~dVP---LVVPeVN~~~i~~~~~~gi~~ia-nPN---Cst~~l~ 140 (366)
T TIGR01745 81 YPKLRESGWQGYWIDAASSLRMKDDAV---IILDPVNQDVITDGLNNGIRTFV-GGN---CTVSLML 140 (366)
T ss_pred HHHHHhCCCCeEEEECChhhhcCCCCC---EEeCCcCHHHHHhHHhCCcCeEE-CcC---HHHHHHH
Confidence 34456779 89999886654332111 35666666654432 333 22 344 4566665
No 450
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.89 E-value=0.27 Score=48.81 Aligned_cols=53 Identities=21% Similarity=0.265 Sum_probs=39.8
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC-------------------C------CHHhhccCCcEEEEccCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT-------------------K------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t-------------------~------~l~~~l~~ADIVIsAvG~p 292 (371)
||.|||+|. ||.++|..|+.++. ++.+++... . +-.+.+++|||||.++|.|
T Consensus 1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~ 79 (307)
T cd05290 1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence 589999977 59999999988773 577765321 0 1247799999999999965
Q ss_pred C
Q 017438 293 N 293 (371)
Q Consensus 293 ~ 293 (371)
.
T Consensus 80 ~ 80 (307)
T cd05290 80 I 80 (307)
T ss_pred C
Confidence 3
No 451
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=91.89 E-value=0.38 Score=47.81 Aligned_cols=75 Identities=23% Similarity=0.315 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCC-eEEEEeCCC-------------------CCHHh----hcc-CCcEEEEccCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDA-TVSIVHSRT-------------------KNPEE----ITR-QADIIISAVGQ 291 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~~t-------------------~~l~~----~l~-~ADIVIsAvG~ 291 (371)
.|++|+|.|.|. +|..+++++...|+ .|+++.++. .++.+ .+. .+|+||.++|.
T Consensus 191 ~g~~VlV~G~G~-vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~ 269 (371)
T cd08281 191 PGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGS 269 (371)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCC
Confidence 589999999865 69999999999998 577664321 12222 221 47999999997
Q ss_pred CCcccC--CCcCCCeEEEEeeec
Q 017438 292 PNMVRG--SWIKPGAVIIDVGIN 312 (371)
Q Consensus 292 p~~v~~--d~ik~gavVIDvgin 312 (371)
+..+.. +.++++..++-+|..
T Consensus 270 ~~~~~~~~~~l~~~G~iv~~G~~ 292 (371)
T cd08281 270 VPALETAYEITRRGGTTVTAGLP 292 (371)
T ss_pred hHHHHHHHHHHhcCCEEEEEccC
Confidence 654332 457787777778854
No 452
>PRK08263 short chain dehydrogenase; Provisional
Probab=91.88 E-value=0.29 Score=46.29 Aligned_cols=35 Identities=14% Similarity=-0.014 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|.++|.|+++-+|+.++..|+++|+.|+++.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999999999999999999999999988765
No 453
>PRK07677 short chain dehydrogenase; Provisional
Probab=91.85 E-value=0.2 Score=46.54 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=31.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999999999999999999999888765
No 454
>PRK07201 short chain dehydrogenase; Provisional
Probab=91.81 E-value=0.23 Score=52.95 Aligned_cols=38 Identities=26% Similarity=0.363 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~ 405 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNG 405 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 57899999999988899999999999999999987653
No 455
>PLN00106 malate dehydrogenase
Probab=91.81 E-value=0.54 Score=47.09 Aligned_cols=56 Identities=21% Similarity=0.443 Sum_probs=42.1
Q ss_pred CCCEEEEEcC-CcccHHHHHHHhccCCC--eEEEEeC-----------------------CCCCHHhhccCCcEEEEccC
Q 017438 237 KGKRAVVIGR-SNIVGMPAALLLQREDA--TVSIVHS-----------------------RTKNPEEITRQADIIISAVG 290 (371)
Q Consensus 237 ~GK~vvVIG~-s~~VGkpla~lL~~~gA--tVtv~h~-----------------------~t~~l~~~l~~ADIVIsAvG 290 (371)
..++|+|+|+ |. ||..++..|..++. ++.+++. .+.++.+.+++||+||.+.|
T Consensus 17 ~~~KV~IiGaaG~-VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 17 PGFKVAVLGAAGG-IGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 4579999999 66 69999999986552 5555532 23456788999999999999
Q ss_pred CCC
Q 017438 291 QPN 293 (371)
Q Consensus 291 ~p~ 293 (371)
.|.
T Consensus 96 ~~~ 98 (323)
T PLN00106 96 VPR 98 (323)
T ss_pred CCC
Confidence 653
No 456
>PRK07806 short chain dehydrogenase; Provisional
Probab=91.78 E-value=0.26 Score=45.36 Aligned_cols=36 Identities=31% Similarity=0.396 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999998778999999999999999887664
No 457
>PRK07109 short chain dehydrogenase; Provisional
Probab=91.76 E-value=0.14 Score=50.60 Aligned_cols=37 Identities=27% Similarity=0.297 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++|.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999998889999999999999999998775
No 458
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.75 E-value=0.35 Score=48.10 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=46.7
Q ss_pred CCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC---------------------------------CCHHhhc
Q 017438 233 GFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT---------------------------------KNPEEIT 279 (371)
Q Consensus 233 ~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t---------------------------------~~l~~~l 279 (371)
..+++|+.|+|-|+|.-+||.+|..++++|+++.+...+. +.+++..
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999776654321 1234556
Q ss_pred cCCcEEEEccCC
Q 017438 280 RQADIIISAVGQ 291 (371)
Q Consensus 280 ~~ADIVIsAvG~ 291 (371)
.+-||+|+.+|.
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 788999998884
No 459
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=91.75 E-value=0.57 Score=44.56 Aligned_cols=94 Identities=19% Similarity=0.196 Sum_probs=62.9
Q ss_pred cCCHHHHHHHHHHhCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-----------------C--C----H
Q 017438 219 PCTPKGCIELLHRYGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-----------------K--N----P 275 (371)
Q Consensus 219 PcTa~gvi~lL~~~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-----------------~--~----l 275 (371)
++.+...+..+...+..-.|..++|.|.++.+|..++.++..+|+.|++..++. . + +
T Consensus 120 ~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (323)
T cd05282 120 YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRV 199 (323)
T ss_pred hccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHH
Confidence 333344444555544445789999999988889999999999999877654321 1 1 1
Q ss_pred Hhhc--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 276 EEIT--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 276 ~~~l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
.+.+ +..|+++..+|.+... --++++++..++++|..
T Consensus 200 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 200 KEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred HHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 1222 3589999988865432 12467888889998854
No 460
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=91.75 E-value=0.37 Score=47.58 Aligned_cols=76 Identities=26% Similarity=0.353 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCe-EEEEeCC-------------------CCCHH----hhc--cCCcEEEEcc
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDAT-VSIVHSR-------------------TKNPE----EIT--RQADIIISAV 289 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAt-Vtv~h~~-------------------t~~l~----~~l--~~ADIVIsAv 289 (371)
-.|++|+|.|.|. +|..+++++...|++ |+.+.+. ..+.. +.+ +.+|+||.++
T Consensus 175 ~~g~~VlV~G~g~-vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~ 253 (358)
T TIGR03451 175 KRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAV 253 (358)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 3599999999755 699999999999985 7665432 11221 223 2489999999
Q ss_pred CCCCcccC--CCcCCCeEEEEeeec
Q 017438 290 GQPNMVRG--SWIKPGAVIIDVGIN 312 (371)
Q Consensus 290 G~p~~v~~--d~ik~gavVIDvgin 312 (371)
|.+..+.. +.+++|..++.+|..
T Consensus 254 g~~~~~~~~~~~~~~~G~iv~~G~~ 278 (358)
T TIGR03451 254 GRPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred CCHHHHHHHHHHhccCCEEEEECCC
Confidence 97654332 357888888888864
No 461
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=91.73 E-value=0.37 Score=52.20 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.||+|+|||+|.+ |...|..|.++|+.|+++.+.
T Consensus 309 ~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~~ 342 (639)
T PRK12809 309 RSEKVAVIGAGPA-GLGCADILARAGVQVDVFDRH 342 (639)
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeCC
Confidence 5999999999887 999999999999999999644
No 462
>PRK06182 short chain dehydrogenase; Validated
Probab=91.72 E-value=0.21 Score=47.13 Aligned_cols=35 Identities=31% Similarity=0.254 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 58999999998888999999999999999988765
No 463
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=91.70 E-value=0.38 Score=47.90 Aligned_cols=93 Identities=25% Similarity=0.320 Sum_probs=57.7
Q ss_pred cCCHHHHHHHHHH-hCCCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC-------------------CCHHhh
Q 017438 219 PCTPKGCIELLHR-YGFDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------------KNPEEI 278 (371)
Q Consensus 219 PcTa~gvi~lL~~-~~i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t-------------------~~l~~~ 278 (371)
|++..-.+.+|.. ++... |.+|+|.|+++.||..+.+++...|+++.+.-++. .++.+.
T Consensus 124 ~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~ 202 (326)
T COG0604 124 PLAGLTAWLALFDRAGLKP-GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQ 202 (326)
T ss_pred HHHHHHHHHHHHHhcCCCC-CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHH
Confidence 3333444445544 33333 99999999888899999999999996544433221 123333
Q ss_pred ----c--cCCcEEEEccCCCCcc-cCCCcCCCeEEEEeeec
Q 017438 279 ----T--RQADIIISAVGQPNMV-RGSWIKPGAVIIDVGIN 312 (371)
Q Consensus 279 ----l--~~ADIVIsAvG~p~~v-~~d~ik~gavVIDvgin 312 (371)
+ +..|+|+-.+|.+.+- .-+.++++-.++.+|..
T Consensus 203 v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~ 243 (326)
T COG0604 203 VRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243 (326)
T ss_pred HHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence 3 2578888888865442 23456666666677653
No 464
>PRK09135 pteridine reductase; Provisional
Probab=91.70 E-value=0.23 Score=45.40 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999999999999999999988764
No 465
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=91.69 E-value=0.28 Score=48.49 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.2
Q ss_pred CCCCCCCEEEEEcC---CcccHHHHHHHhccCCCeEEEE
Q 017438 233 GFDIKGKRAVVIGR---SNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 233 ~i~l~GK~vvVIG~---s~~VGkpla~lL~~~gAtVtv~ 268 (371)
+.+++||.++|-|+ +++ |+.+|..|.++||+|.++
T Consensus 4 ~~~l~gk~alITGa~~s~GI-G~a~A~~la~~Ga~Vv~~ 41 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGY-GWAIAKALAAAGAEILVG 41 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcH-HHHHHHHHHHCCCEEEEE
Confidence 46799999999999 664 999999999999999883
No 466
>PRK07577 short chain dehydrogenase; Provisional
Probab=91.69 E-value=0.29 Score=44.58 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999988775
No 467
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=91.62 E-value=0.37 Score=52.21 Aligned_cols=34 Identities=26% Similarity=0.475 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.||+|+|||+|.+ |...|..|.++|++|+|+.+.
T Consensus 326 ~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~~ 359 (654)
T PRK12769 326 SDKRVAIIGAGPA-GLACADVLARNGVAVTVYDRH 359 (654)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence 6899999999997 999999999999999999753
No 468
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=91.59 E-value=0.29 Score=38.15 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=29.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
+++|||+|-+ |--+|..|.+.|.+||++++..
T Consensus 1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence 6899999885 9999999999999999999875
No 469
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=91.59 E-value=0.15 Score=47.11 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.++||+++|.|.++-+|..++..|+++|++|+++.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 4689999999999999999999999999999888765
No 470
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=91.57 E-value=0.45 Score=47.04 Aligned_cols=54 Identities=30% Similarity=0.496 Sum_probs=41.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC--eEEEEeCCC----------------------------CCHHhhccCCcEEEEc
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA--TVSIVHSRT----------------------------KNPEEITRQADIIISA 288 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA--tVtv~h~~t----------------------------~~l~~~l~~ADIVIsA 288 (371)
.+|.|+|+++.||..++..|+..|. +|+.+.++. .+ .+.+++|||||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence 4799999955579999999998874 477776421 12 2458999999999
Q ss_pred cCCCC
Q 017438 289 VGQPN 293 (371)
Q Consensus 289 vG~p~ 293 (371)
+|.|.
T Consensus 80 ag~p~ 84 (309)
T cd05294 80 AGVPR 84 (309)
T ss_pred cCCCC
Confidence 99764
No 471
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=91.51 E-value=0.3 Score=46.65 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=40.9
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC---------------------CHHhhccCCcEEEEccC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK---------------------NPEEITRQADIIISAVG 290 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~---------------------~l~~~l~~ADIVIsAvG 290 (371)
++++|.|+++.+|+.++..|+++|++|+++.++.. .+++.++.+|+||..++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 46999999888999999999999999998876421 23355677898887665
No 472
>PRK06701 short chain dehydrogenase; Provisional
Probab=91.51 E-value=0.29 Score=47.18 Aligned_cols=38 Identities=32% Similarity=0.461 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||+++|.|+++-+|..++..|+++|++|+++.++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999989999999999999999988665
No 473
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.49 E-value=0.22 Score=47.40 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCc--ccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~--~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|+|. -+|+.++..|+++|++|.++.++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 6899999999872 35999999999999999887654
No 474
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=91.48 E-value=0.35 Score=49.24 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=52.1
Q ss_pred CCEEEEEcCCcccHHHHHHHhccCC-------CeEEEEeCC---------------------------------CCCHHh
Q 017438 238 GKRAVVIGRSNIVGMPAALLLQRED-------ATVSIVHSR---------------------------------TKNPEE 277 (371)
Q Consensus 238 GK~vvVIG~s~~VGkpla~lL~~~g-------AtVtv~h~~---------------------------------t~~l~~ 277 (371)
-.+|+|||+|.- |.++|..|.+.| .+|++..++ |.|+.+
T Consensus 11 ~~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e 89 (365)
T PTZ00345 11 PLKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE 89 (365)
T ss_pred CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence 358999999886 999999999876 578775332 246678
Q ss_pred hccCCcEEEEccCCCCc------ccCC-CcCCCeEEEEee
Q 017438 278 ITRQADIIISAVGQPNM------VRGS-WIKPGAVIIDVG 310 (371)
Q Consensus 278 ~l~~ADIVIsAvG~p~~------v~~d-~ik~gavVIDvg 310 (371)
.+++||+||.|++...+ +.+- .+++++++|-+.
T Consensus 90 av~~aDiIvlAVPsq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 90 AVEDADLLIFVIPHQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HHhcCCEEEEEcChHHHHHHHHHhccccccCCCCEEEEEe
Confidence 89999999999985332 3321 456666666653
No 475
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.48 E-value=0.27 Score=45.19 Aligned_cols=36 Identities=28% Similarity=0.310 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.+++|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 367899999999988999999999999999987644
No 476
>PRK08267 short chain dehydrogenase; Provisional
Probab=91.39 E-value=0.21 Score=46.51 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.2
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
|+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 789999999999999999999999999988764
No 477
>PRK10423 transcriptional repressor RbsR; Provisional
Probab=91.33 E-value=3.9 Score=39.13 Aligned_cols=88 Identities=16% Similarity=0.340 Sum_probs=56.2
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHhHhccCCCc-------------eEEEEEeC-CCcchHHHHHHHHHHHHHcCCeEEEE
Q 017438 81 KVIDGKA-VAKQIRDEITGEVSRMKDAIGVVP-------------GLAVILVG-DRKDSATYVRNKKKACQSVGINSFEV 145 (371)
Q Consensus 81 ~ildGk~-la~~i~~~ik~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~~~~~GI~~~~~ 145 (371)
++|+|+. ++++.++.+.+.+++| |.+| .+++|.-. +++--..+.+...+.|++.|.+....
T Consensus 17 rvLn~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~ 92 (327)
T PRK10423 17 HVINKDRFVSEAITAKVEAAIKEL----NYAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLC 92 (327)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCccHHHHHHhhCCCCeEEEEeCCCCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 4566654 5666666665555554 4444 45555432 34555666788899999999987765
Q ss_pred eCCCCCCHHHHHHHHHHhcCCCCccEEEEe
Q 017438 146 HLPEDTSEQEVLKHISVFNDDPSVHGILVQ 175 (371)
Q Consensus 146 ~lp~~v~~~el~~~I~~LN~D~~V~GIlVq 175 (371)
... -+.++..+.++.+.+ .+|+||++.
T Consensus 93 ~~~--~~~~~~~~~~~~l~~-~~vdGiI~~ 119 (327)
T PRK10423 93 NTE--GDEQRMNRNLETLMQ-KRVDGLLLL 119 (327)
T ss_pred eCC--CCHHHHHHHHHHHHH-cCCCEEEEe
Confidence 433 344445567777655 479999996
No 478
>PRK12744 short chain dehydrogenase; Provisional
Probab=91.30 E-value=0.25 Score=46.08 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEe
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVH 269 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h 269 (371)
.++||+++|.|+++-+|+.++..|+.+|++|.+..
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~ 39 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIH 39 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEe
Confidence 46899999999999999999999999999965554
No 479
>PRK07831 short chain dehydrogenase; Provisional
Probab=91.28 E-value=0.28 Score=45.84 Aligned_cols=38 Identities=24% Similarity=0.204 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCc-ccHHHHHHHhccCCCeEEEEeCCC
Q 017438 235 DIKGKRAVVIGRSN-IVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 235 ~l~GK~vvVIG~s~-~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
.++||+++|.|+++ -+|+.++..|+++|++|+++.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~ 52 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHE 52 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCH
Confidence 35789999999853 369999999999999999886643
No 480
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=91.28 E-value=0.42 Score=44.87 Aligned_cols=52 Identities=21% Similarity=0.408 Sum_probs=41.7
Q ss_pred EEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC----------------CHHhhccCCcEEEEccCCC
Q 017438 241 AVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------NPEEITRQADIIISAVGQP 292 (371)
Q Consensus 241 vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~----------------~l~~~l~~ADIVIsAvG~p 292 (371)
|+|.|++|-+|..++..|+++|.+|+...|+.. .+.+.+.+.|+||..+|.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCC
Confidence 589999999999999999999999999877532 1224567899999888754
No 481
>PRK13376 pyrB bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional
Probab=91.23 E-value=2.6 Score=45.15 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHHHHc-CCeEEEEeCCCCC---CHHHHHHHHHHhcCCCCccEEEEeCCCCCCCCHHHHHhhCCc-cc--c
Q 017438 124 SATYVRNKKKACQSV-GINSFEVHLPEDT---SEQEVLKHISVFNDDPSVHGILVQLPLPCHIDEQSILNAVSM-EK--D 196 (371)
Q Consensus 124 S~~Yv~~k~k~~~~~-GI~~~~~~lp~~v---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~i~~~~i~~~I~p-~K--D 196 (371)
|..=--+=..++.++ |..+.+..- .+. ..|-+.+.++-|..--+.++|.+--|... ......+.+.. .+ .
T Consensus 61 STRTR~SFE~A~~~LgGg~~i~l~~-~~ssl~kGESl~DTarvLs~y~D~d~IviR~~~~g--~~~~~~~~l~~~a~~s~ 137 (525)
T PRK13376 61 STRTKESFINAAKFHKNVKVNIFDS-EHSSFNKQESYTDTFNMLTGYSDYSIFIVRTRLEG--VCRLLEEKVSEFASRNG 137 (525)
T ss_pred CchHHHHHHHHHHHcCCCcEEEcCC-ccccCCCCcCHHHHHHHHHHcCCCcEEEEeCCccc--hhHHHHHHHHHHHHhcC
Confidence 333333456677778 888876532 211 12557777777766422238888866433 12222222221 11 1
Q ss_pred cCccCcchhhhhccCCCccccccCCHHH-HHHHHHHhCCCCCCCEEEEEcCC--cccHHHHHHHhccCC-CeEEEEeCC-
Q 017438 197 VDGFHPLNIGRLAMRGREPLFIPCTPKG-CIELLHRYGFDIKGKRAVVIGRS--NIVGMPAALLLQRED-ATVSIVHSR- 271 (371)
Q Consensus 197 VDgl~~~N~G~l~~g~~~~~~~PcTa~g-vi~lL~~~~i~l~GK~vvVIG~s--~~VGkpla~lL~~~g-AtVtv~h~~- 271 (371)
|.-....|.| ..+.+.||=+.+ ++.+.++.|.+++|++|++||-. +-+.+.++.+|...| +.|++|+-.
T Consensus 138 vpVp~VINAg------dg~~~HPTQaLaDl~TI~E~~G~~l~glkVa~vGD~~~~rva~Sl~~~l~~~g~~~v~l~~P~~ 211 (525)
T PRK13376 138 IEVPAFINAG------DGKHEHPTQELLDEFTFLEQNNFDNSFIHIALVGDLLHGRTVHSKVNGLKIFKNVKVDLIAPEE 211 (525)
T ss_pred CCcceEEECC------CCCCCCchHHHHHHHHHHHHcCCCcCCCEEEEECCCCCCcHHHHHHHHHHhcCCcEEEEECCcc
Confidence 2111225642 134567998888 66666666668999999999995 335888888888888 899998632
Q ss_pred --------------------CCCHHhhccCCcE
Q 017438 272 --------------------TKNPEEITRQADI 284 (371)
Q Consensus 272 --------------------t~~l~~~l~~ADI 284 (371)
+.++++.+++||+
T Consensus 212 ~~~p~~~~~~a~~~G~~v~i~~d~~eav~~AD~ 244 (525)
T PRK13376 212 LAMPEHYVEKMKKNGFEVRIFSSIEEYLSQKDV 244 (525)
T ss_pred ccCCHHHHHHHHHcCCeEEEEcCHHHHhccCCc
Confidence 2567788999994
No 482
>PRK07985 oxidoreductase; Provisional
Probab=91.21 E-value=0.28 Score=47.36 Aligned_cols=36 Identities=33% Similarity=0.457 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
.++||+++|.|+++-+|+.++..|+++|++|.+..+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 589999999999998999999999999999988754
No 483
>PRK06720 hypothetical protein; Provisional
Probab=91.20 E-value=0.24 Score=44.70 Aligned_cols=42 Identities=29% Similarity=0.412 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
..++||.++|.|++.-+|+.++..|.++|++|.++.++...+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~ 53 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESG 53 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 457899999999988779999999999999999987664433
No 484
>PRK08303 short chain dehydrogenase; Provisional
Probab=91.16 E-value=0.31 Score=47.68 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 234 FDIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 234 i~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+++||.++|.|++.-+|+.++..|+++|++|+++.++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 35789999999998778999999999999999998764
No 485
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=91.14 E-value=0.48 Score=45.45 Aligned_cols=68 Identities=21% Similarity=0.360 Sum_probs=47.2
Q ss_pred EEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCC-------------------------CHHhhccCCcEEEEccCCCCc
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK-------------------------NPEEITRQADIIISAVGQPNM 294 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~-------------------------~l~~~l~~ADIVIsAvG~p~~ 294 (371)
++.|||+|.+ |..++..|.+.|.+|+++.++.. +..+ ...+|+||.++.....
T Consensus 2 ~I~IiG~G~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~~~~ 79 (304)
T PRK06522 2 KIAILGAGAI-GGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAVKAYQL 79 (304)
T ss_pred EEEEECCCHH-HHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEecccccH
Confidence 6899999875 99999999999999999876321 1222 3778999999986442
Q ss_pred ---cc--CCCcCCCeEEEEe
Q 017438 295 ---VR--GSWIKPGAVIIDV 309 (371)
Q Consensus 295 ---v~--~d~ik~gavVIDv 309 (371)
+. ...+.++++||.+
T Consensus 80 ~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 80 PAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHhhhcCCCCEEEEe
Confidence 11 1234556666654
No 486
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=91.13 E-value=0.41 Score=43.46 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=25.0
Q ss_pred EEEEEcCCcccHHHHHHHhccCCC-eEEEEeC
Q 017438 240 RAVVIGRSNIVGMPAALLLQREDA-TVSIVHS 270 (371)
Q Consensus 240 ~vvVIG~s~~VGkpla~lL~~~gA-tVtv~h~ 270 (371)
+|+|||.|++ |-.++..|...|. ++++++.
T Consensus 1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 31 (174)
T cd01487 1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDF 31 (174)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 5889999885 9999999999987 5888753
No 487
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.13 E-value=0.51 Score=47.17 Aligned_cols=55 Identities=15% Similarity=0.291 Sum_probs=41.0
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCC-------eEEEEeCCC--------------------------CCHHhhccCCcEE
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDA-------TVSIVHSRT--------------------------KNPEEITRQADII 285 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gA-------tVtv~h~~t--------------------------~~l~~~l~~ADIV 285 (371)
++|.|||+++.||..++..|...|. ++.+.+... .+..+.+++||||
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv 82 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA 82 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence 5899999955579999999987763 466665421 1335779999999
Q ss_pred EEccCCCC
Q 017438 286 ISAVGQPN 293 (371)
Q Consensus 286 IsAvG~p~ 293 (371)
|.+.|.|.
T Consensus 83 vitaG~~~ 90 (322)
T cd01338 83 LLVGAKPR 90 (322)
T ss_pred EEeCCCCC
Confidence 99999753
No 488
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=91.10 E-value=0.72 Score=47.65 Aligned_cols=86 Identities=22% Similarity=0.187 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCC---------cccHHHHHHHhccCCCeEEEEeCC--------------CCCHHhh
Q 017438 222 PKGCIELLHRYGFDIKGKRAVVIGRS---------NIVGMPAALLLQREDATVSIVHSR--------------TKNPEEI 278 (371)
Q Consensus 222 a~gvi~lL~~~~i~l~GK~vvVIG~s---------~~VGkpla~lL~~~gAtVtv~h~~--------------t~~l~~~ 278 (371)
+.-+.+++..+.- ++||++.|+|-. +.-..+++.+|+++||+|.+..-. ..++++.
T Consensus 295 k~~~~~~i~~~~~-l~Gk~iavlgLafKpnTDD~ReSpa~~vi~~L~~~Ga~V~aYDP~a~~~~~~~~~~~~~~~~~~~~ 373 (414)
T COG1004 295 KDKLAEKILNHLG-LKGKTIAVLGLAFKPNTDDMRESPALDIIKRLQEKGAEVIAYDPVAMENAFRNFPDVELESDAEEA 373 (414)
T ss_pred HHHHHHHHHHhcC-CCCcEEEEEEEeecCCCccchhchHHHHHHHHHHCCCEEEEECchhhHHHHhcCCCceEeCCHHHH
Q ss_pred ccCCcEEEEccCCCCcccCCCcC---CCeEEEE
Q 017438 279 TRQADIIISAVGQPNMVRGSWIK---PGAVIID 308 (371)
Q Consensus 279 l~~ADIVIsAvG~p~~v~~d~ik---~gavVID 308 (371)
++.||++|..+...+|-..+|-+ ++-+|||
T Consensus 374 ~~~aDaivi~tew~ef~~~d~~~~~m~~~~v~D 406 (414)
T COG1004 374 LKGADAIVINTEWDEFRDLDFEKLLMKTPVVID 406 (414)
T ss_pred HhhCCEEEEeccHHHHhccChhhhhccCCEEEe
No 489
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=91.09 E-value=0.41 Score=42.88 Aligned_cols=74 Identities=24% Similarity=0.304 Sum_probs=45.8
Q ss_pred CCCEEEEEcCC-cccHHHHHHHhccCCCeEEEEeCC---------------------------CCCHHhhccCCcEEEEc
Q 017438 237 KGKRAVVIGRS-NIVGMPAALLLQREDATVSIVHSR---------------------------TKNPEEITRQADIIISA 288 (371)
Q Consensus 237 ~GK~vvVIG~s-~~VGkpla~lL~~~gAtVtv~h~~---------------------------t~~l~~~l~~ADIVIsA 288 (371)
+|+++++||-+ +-|.+.++.+|...|.+++++.-. +.++++.+++||||++-
T Consensus 1 ~gl~i~~vGD~~~rv~~Sl~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~e~l~~aDvvy~~ 80 (158)
T PF00185_consen 1 KGLKIAYVGDGHNRVAHSLIELLAKFGMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITITDDIEEALKGADVVYTD 80 (158)
T ss_dssp TTEEEEEESSTTSHHHHHHHHHHHHTTSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEESSHHHHHTT-SEEEEE
T ss_pred CCCEEEEECCCCChHHHHHHHHHHHcCCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEEeCHHHhcCCCCEEEEc
Confidence 46777777742 234777777777777776666321 24788999999999855
Q ss_pred cCC-C-------------Cc-ccCCCc---CCCeEEEEee
Q 017438 289 VGQ-P-------------NM-VRGSWI---KPGAVIIDVG 310 (371)
Q Consensus 289 vG~-p-------------~~-v~~d~i---k~gavVIDvg 310 (371)
.=. . .+ |+.+.+ ++++++.-..
T Consensus 81 ~~~s~~~~e~~~~~~~~~~y~v~~~~m~~a~~~~i~mH~L 120 (158)
T PF00185_consen 81 RWQSMGDKERFKRLEKFKPYQVTEELMERAKPDAIFMHPL 120 (158)
T ss_dssp SSSCTTSGGHHHHHHHHGGGSBSHHHHHTSSTT-EEEESS
T ss_pred CcccccchHHHHHHHHhcCCccCHHHHHhcCCCcEEEeCC
Confidence 422 1 03 555544 6788888776
No 490
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=91.06 E-value=0.35 Score=47.57 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999998888999999999999999887654
No 491
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=91.04 E-value=0.34 Score=55.07 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
-.||+|+|||+|.+ |...|..|.++|..|||..+.
T Consensus 304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~ 338 (944)
T PRK12779 304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF 338 (944)
T ss_pred CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence 36999999999998 999999999999999999753
No 492
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=91.03 E-value=0.36 Score=47.18 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeC
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHS 270 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~ 270 (371)
+++||+|+|.|+++-+|..++..|+++|++|+++.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r 38 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR 38 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec
Confidence 678999999999988999999999999999887643
No 493
>PRK12746 short chain dehydrogenase; Provisional
Probab=91.02 E-value=0.25 Score=45.70 Aligned_cols=34 Identities=35% Similarity=0.484 Sum_probs=31.0
Q ss_pred CCCCCEEEEEcCCcccHHHHHHHhccCCCeEEEE
Q 017438 235 DIKGKRAVVIGRSNIVGMPAALLLQREDATVSIV 268 (371)
Q Consensus 235 ~l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~ 268 (371)
++++|+++|.|+++-+|..++..|+++|++|.++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~ 36 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIH 36 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 3678999999999999999999999999998775
No 494
>PRK06180 short chain dehydrogenase; Provisional
Probab=90.93 E-value=0.27 Score=46.57 Aligned_cols=35 Identities=17% Similarity=-0.013 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
.+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence 47899999999999999999999999999998764
No 495
>PRK07791 short chain dehydrogenase; Provisional
Probab=90.92 E-value=0.25 Score=47.41 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
++||.++|.|++.-+|+.++..|+++|++|.++.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCC
Confidence 689999999999999999999999999999887543
No 496
>PTZ00325 malate dehydrogenase; Provisional
Probab=90.91 E-value=0.72 Score=46.17 Aligned_cols=57 Identities=26% Similarity=0.451 Sum_probs=42.4
Q ss_pred CCCCEEEEEcC-CcccHHHHHHHhccCC--CeEEEEeCC----------------------C-CCHHhhccCCcEEEEcc
Q 017438 236 IKGKRAVVIGR-SNIVGMPAALLLQRED--ATVSIVHSR----------------------T-KNPEEITRQADIIISAV 289 (371)
Q Consensus 236 l~GK~vvVIG~-s~~VGkpla~lL~~~g--AtVtv~h~~----------------------t-~~l~~~l~~ADIVIsAv 289 (371)
++.++|+|||+ |. ||..++..|..++ .++.+++.. . .+..+.++++|+||.+.
T Consensus 6 ~~~~KI~IiGaaG~-VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 6 LKMFKVAVLGAAGG-IGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 57789999999 66 6999999998655 356665431 0 12267899999999999
Q ss_pred CCCC
Q 017438 290 GQPN 293 (371)
Q Consensus 290 G~p~ 293 (371)
|.|.
T Consensus 85 G~~~ 88 (321)
T PTZ00325 85 GVPR 88 (321)
T ss_pred CCCC
Confidence 9754
No 497
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=90.89 E-value=0.16 Score=58.06 Aligned_cols=116 Identities=16% Similarity=0.193 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCC-Ce-------------EEEEeCCC--------------------CC---HHhh
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQRED-AT-------------VSIVHSRT--------------------KN---PEEI 278 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~g-At-------------Vtv~h~~t--------------------~~---l~~~ 278 (371)
.+.|+|+|||+|.+ |++.+..|.+.. +. |+||.... .| +.+.
T Consensus 567 ~~~~rIlVLGAG~V-G~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~ 645 (1042)
T PLN02819 567 KKSQNVLILGAGRV-CRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY 645 (1042)
T ss_pred ccCCcEEEECCCHH-HHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence 35889999999885 999999998653 34 88886331 12 4445
Q ss_pred ccCCcEEEEccCCC-Cc-ccCCCcCCCeEEEEeeecCCCCCCCCCCceeecccchhhhhhhcceeccCCCCccHHHHHHH
Q 017438 279 TRQADIIISAVGQP-NM-VRGSWIKPGAVIIDVGINPVEDAKSPRGYRLVGDVCYEEACEVASAITPVPGGVGPMTIAML 356 (371)
Q Consensus 279 l~~ADIVIsAvG~p-~~-v~~d~ik~gavVIDvgin~~~~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~amL 356 (371)
++++|+||++++.. |. +-...++-|..++|..+...+. -.+ .+.++.++..-=+-=|.-|--..|+
T Consensus 646 v~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~----------~~L--~e~Ak~AGV~~m~e~GlDPGid~~l 713 (1042)
T PLN02819 646 VSQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEM----------SAL--DSKAKEAGITILCEMGLDPGIDHMM 713 (1042)
T ss_pred hcCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHH----------HHH--HHHHHHcCCEEEECCccCHHHHHHH
Confidence 57899999999853 22 4445677788888876332110 111 1334445532112234678888888
Q ss_pred HHHHHHHH
Q 017438 357 LSNTLTSA 364 (371)
Q Consensus 357 l~n~v~a~ 364 (371)
..+++...
T Consensus 714 A~~~Id~~ 721 (1042)
T PLN02819 714 AMKMIDDA 721 (1042)
T ss_pred HHHHHHhh
Confidence 88888766
No 498
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.86 E-value=0.6 Score=47.78 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCC
Q 017438 236 IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR 271 (371)
Q Consensus 236 l~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~ 271 (371)
+.+|++.|+|-|+. |+..+.+|+++|+.|+.++..
T Consensus 4 ~~~~~i~v~G~G~s-G~s~~~~l~~~G~~v~~~D~~ 38 (438)
T PRK03806 4 YQGKKVVIIGLGLT-GLSCVDFFLARGVTPRVIDTR 38 (438)
T ss_pred cCCCEEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCC
Confidence 56899999999997 999999999999999999854
No 499
>PLN02780 ketoreductase/ oxidoreductase
Probab=90.83 E-value=0.18 Score=49.78 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCCCCH
Q 017438 237 KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 275 (371)
Q Consensus 237 ~GK~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t~~l 275 (371)
.|+.++|.|+++-+|+.+|..|+++|++|.++.|+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l 90 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKL 90 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence 699999999998889999999999999999998875443
No 500
>PRK08177 short chain dehydrogenase; Provisional
Probab=90.80 E-value=0.41 Score=43.73 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=30.7
Q ss_pred CEEEEEcCCcccHHHHHHHhccCCCeEEEEeCCC
Q 017438 239 KRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT 272 (371)
Q Consensus 239 K~vvVIG~s~~VGkpla~lL~~~gAtVtv~h~~t 272 (371)
|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC
Confidence 6799999999999999999999999999887754
Done!