Query 017439
Match_columns 371
No_of_seqs 141 out of 545
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:27:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m6e_X S-adenosyl-L-methionnin 100.0 1.7E-96 6E-101 728.6 25.5 340 11-371 3-357 (359)
2 2efj_A 3,7-dimethylxanthine me 100.0 1.1E-95 4E-100 728.2 27.2 340 11-371 3-378 (384)
3 3b5i_A S-adenosyl-L-methionine 100.0 8.7E-95 3E-99 720.5 29.8 347 11-369 3-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.5 1E-13 3.5E-18 130.3 14.4 202 63-350 57-258 (279)
5 2p35_A Trans-aconitate 2-methy 99.5 6.7E-13 2.3E-17 122.4 13.7 227 24-351 9-238 (259)
6 2yqz_A Hypothetical protein TT 99.4 1.7E-12 5.9E-17 119.7 15.4 221 63-371 39-262 (263)
7 3bus_A REBM, methyltransferase 99.2 2.6E-09 9E-14 99.2 22.2 192 63-344 61-256 (273)
8 3dtn_A Putative methyltransfer 99.2 9.1E-10 3.1E-14 100.0 16.8 171 62-303 43-217 (234)
9 3hem_A Cyclopropane-fatty-acyl 99.1 4.2E-08 1.4E-12 93.0 23.9 213 63-351 72-289 (302)
10 3f4k_A Putative methyltransfer 99.0 9.7E-09 3.3E-13 94.3 18.4 207 63-371 46-257 (257)
11 1vl5_A Unknown conserved prote 99.0 4.9E-09 1.7E-13 96.9 16.1 154 63-303 37-193 (260)
12 1xxl_A YCGJ protein; structura 99.0 7.7E-09 2.6E-13 94.8 16.2 155 62-303 20-177 (239)
13 3ujc_A Phosphoethanolamine N-m 99.0 2.5E-08 8.5E-13 91.6 19.2 153 62-301 54-207 (266)
14 1kpg_A CFA synthase;, cyclopro 99.0 6.8E-08 2.3E-12 90.5 21.7 160 63-300 64-228 (287)
15 3hnr_A Probable methyltransfer 98.9 5.5E-09 1.9E-13 93.8 12.0 161 63-304 45-205 (220)
16 3h2b_A SAM-dependent methyltra 98.9 6E-09 2E-13 92.5 11.8 143 64-302 42-184 (203)
17 3mgg_A Methyltransferase; NYSG 98.9 2.9E-08 1E-12 92.4 16.7 161 62-302 36-200 (276)
18 3kkz_A Uncharacterized protein 98.9 4.9E-08 1.7E-12 90.6 18.0 152 62-304 45-201 (267)
19 3lcc_A Putative methyl chlorid 98.9 1.4E-08 4.7E-13 92.5 13.2 141 64-304 67-211 (235)
20 2o57_A Putative sarcosine dime 98.9 1.1E-07 3.8E-12 89.5 19.9 150 63-301 82-235 (297)
21 2aot_A HMT, histamine N-methyl 98.9 6.9E-09 2.4E-13 98.2 10.4 160 62-298 51-219 (292)
22 3sm3_A SAM-dependent methyltra 98.9 4.5E-08 1.5E-12 88.1 15.3 168 63-300 30-207 (235)
23 4hg2_A Methyltransferase type 98.9 1.5E-08 5E-13 95.3 12.0 101 64-234 40-141 (257)
24 3ou2_A SAM-dependent methyltra 98.9 4.3E-08 1.5E-12 87.3 14.4 158 65-300 48-205 (218)
25 4htf_A S-adenosylmethionine-de 98.8 3.9E-08 1.3E-12 92.2 14.6 163 63-303 68-235 (285)
26 2p7i_A Hypothetical protein; p 98.8 2.8E-08 9.5E-13 90.0 12.2 152 64-300 43-199 (250)
27 4gek_A TRNA (CMO5U34)-methyltr 98.8 7.7E-08 2.6E-12 90.5 14.7 161 64-295 71-240 (261)
28 3g5l_A Putative S-adenosylmeth 98.8 3.7E-08 1.3E-12 90.5 11.6 168 62-300 43-216 (253)
29 1ri5_A MRNA capping enzyme; me 98.8 2.3E-07 7.9E-12 86.6 16.9 163 63-301 64-251 (298)
30 3e23_A Uncharacterized protein 98.8 4.1E-08 1.4E-12 87.7 10.9 140 63-300 43-182 (211)
31 3dli_A Methyltransferase; PSI- 98.8 5E-08 1.7E-12 89.1 11.7 142 63-300 41-184 (240)
32 3dlc_A Putative S-adenosyl-L-m 98.8 3.4E-08 1.2E-12 87.7 10.3 155 65-300 45-203 (219)
33 1pjz_A Thiopurine S-methyltran 98.8 1.9E-07 6.5E-12 83.8 15.3 78 152-301 100-177 (203)
34 2fk8_A Methoxy mycolic acid sy 98.8 4.1E-07 1.4E-11 86.6 18.4 160 63-300 90-254 (318)
35 3e8s_A Putative SAM dependent 98.7 6.5E-08 2.2E-12 86.4 11.7 157 63-300 52-209 (227)
36 1xtp_A LMAJ004091AAA; SGPP, st 98.7 8.6E-08 2.9E-12 87.6 12.7 146 62-300 92-238 (254)
37 3bkx_A SAM-dependent methyltra 98.7 3.6E-07 1.2E-11 84.8 17.1 168 63-304 43-223 (275)
38 3l8d_A Methyltransferase; stru 98.7 9.3E-08 3.2E-12 86.8 12.7 147 64-300 54-200 (242)
39 2a14_A Indolethylamine N-methy 98.7 5.2E-08 1.8E-12 91.0 10.9 86 151-301 154-239 (263)
40 1nkv_A Hypothetical protein YJ 98.7 2.8E-07 9.6E-12 84.4 15.5 148 63-300 36-187 (256)
41 3cc8_A Putative methyltransfer 98.7 1.2E-07 4.2E-12 84.7 12.3 157 63-303 32-188 (230)
42 1vlm_A SAM-dependent methyltra 98.7 3.4E-07 1.1E-11 82.5 15.2 91 149-300 98-188 (219)
43 2gb4_A Thiopurine S-methyltran 98.7 6.5E-07 2.2E-11 83.7 17.1 78 152-301 151-228 (252)
44 2vdw_A Vaccinia virus capping 98.7 1.8E-07 6.2E-12 89.7 13.5 109 149-300 125-246 (302)
45 3ege_A Putative methyltransfer 98.7 2.8E-08 9.7E-13 92.3 7.6 149 62-303 33-181 (261)
46 2g72_A Phenylethanolamine N-me 98.7 4.3E-08 1.5E-12 92.3 9.0 90 149-303 170-259 (289)
47 3dh0_A SAM dependent methyltra 98.7 6.9E-08 2.4E-12 86.4 9.8 143 63-301 37-182 (219)
48 3bgv_A MRNA CAP guanine-N7 met 98.7 3.6E-07 1.2E-11 87.1 15.0 100 150-300 111-232 (313)
49 3vc1_A Geranyl diphosphate 2-C 98.7 1E-06 3.6E-11 83.8 18.2 149 63-300 117-269 (312)
50 3lst_A CALO1 methyltransferase 98.6 6.4E-07 2.2E-11 86.9 16.4 151 62-299 183-335 (348)
51 3g5t_A Trans-aconitate 3-methy 98.6 5.1E-07 1.7E-11 85.3 15.0 151 63-290 36-195 (299)
52 3bkw_A MLL3908 protein, S-aden 98.6 1.7E-07 5.8E-12 85.0 10.3 167 63-300 43-214 (243)
53 3mcz_A O-methyltransferase; ad 98.6 1.3E-06 4.6E-11 84.3 17.2 151 64-297 180-336 (352)
54 2ex4_A Adrenal gland protein A 98.6 1.7E-07 5.7E-12 85.7 9.9 144 63-300 79-225 (241)
55 4a6d_A Hydroxyindole O-methylt 98.6 1E-06 3.4E-11 86.1 15.3 152 63-300 179-334 (353)
56 3ocj_A Putative exported prote 98.6 3.4E-07 1.2E-11 87.0 11.7 165 63-300 118-291 (305)
57 3gwz_A MMCR; methyltransferase 98.6 1.3E-06 4.3E-11 85.7 16.0 151 62-299 201-355 (369)
58 4e2x_A TCAB9; kijanose, tetron 98.5 1.1E-07 3.7E-12 94.4 8.0 145 63-301 107-254 (416)
59 3gu3_A Methyltransferase; alph 98.5 1.2E-06 4.2E-11 82.3 14.9 105 62-230 21-128 (284)
60 3g2m_A PCZA361.24; SAM-depende 98.5 7.3E-08 2.5E-12 91.2 6.4 169 66-302 85-276 (299)
61 3reo_A (ISO)eugenol O-methyltr 98.5 5E-06 1.7E-10 81.5 19.6 155 62-301 202-356 (368)
62 2r3s_A Uncharacterized protein 98.5 9E-07 3.1E-11 84.6 13.2 155 62-300 164-323 (335)
63 2i62_A Nicotinamide N-methyltr 98.5 4.3E-07 1.5E-11 83.4 10.4 86 152-302 156-241 (265)
64 3pfg_A N-methyltransferase; N, 98.5 6.2E-07 2.1E-11 82.8 11.3 105 63-232 50-155 (263)
65 2xvm_A Tellurite resistance pr 98.5 1.8E-06 6.3E-11 75.5 13.7 79 151-300 95-173 (199)
66 3i53_A O-methyltransferase; CO 98.5 2.3E-06 7.8E-11 82.2 15.6 150 62-300 168-321 (332)
67 3p9c_A Caffeic acid O-methyltr 98.5 6.7E-06 2.3E-10 80.5 19.2 153 63-302 201-355 (364)
68 2qe6_A Uncharacterized protein 98.5 2.2E-06 7.5E-11 80.9 15.0 91 148-300 152-242 (274)
69 3i9f_A Putative type 11 methyl 98.5 1.2E-06 4.1E-11 75.2 11.8 133 62-300 16-148 (170)
70 4fsd_A Arsenic methyltransfera 98.5 8.1E-07 2.8E-11 87.6 12.1 111 63-232 83-207 (383)
71 1y8c_A S-adenosylmethionine-de 98.5 5.1E-07 1.7E-11 81.6 9.8 106 63-231 37-145 (246)
72 2ip2_A Probable phenazine-spec 98.5 1.2E-05 4.2E-10 76.9 19.6 150 65-300 169-322 (334)
73 2kw5_A SLR1183 protein; struct 98.4 8.9E-07 3E-11 78.2 10.1 142 66-304 32-175 (202)
74 3ofk_A Nodulation protein S; N 98.4 1.3E-06 4.4E-11 78.0 10.9 107 62-231 50-157 (216)
75 2ld4_A Anamorsin; methyltransf 98.4 2.7E-06 9.2E-11 73.8 12.5 118 63-295 12-130 (176)
76 3ggd_A SAM-dependent methyltra 98.4 2.5E-06 8.5E-11 77.8 12.6 94 153-301 124-220 (245)
77 3jwg_A HEN1, methyltransferase 98.4 5E-06 1.7E-10 74.4 13.9 151 64-300 30-192 (219)
78 3giw_A Protein of unknown func 98.4 5.9E-06 2E-10 78.6 14.7 159 62-301 77-248 (277)
79 3cgg_A SAM-dependent methyltra 98.4 1.8E-06 6.2E-11 74.8 10.1 129 63-300 46-175 (195)
80 1qzz_A RDMB, aclacinomycin-10- 98.4 2.8E-06 9.7E-11 82.6 12.5 156 62-303 181-342 (374)
81 3dp7_A SAM-dependent methyltra 98.3 3.3E-06 1.1E-10 82.5 12.5 157 63-299 179-341 (363)
82 1ve3_A Hypothetical protein PH 98.3 3.2E-06 1.1E-10 75.6 11.3 105 64-231 39-145 (227)
83 1fp1_D Isoliquiritigenin 2'-O- 98.3 1.2E-05 4E-10 78.7 16.1 148 63-300 209-360 (372)
84 3thr_A Glycine N-methyltransfe 98.3 1.4E-06 4.7E-11 81.7 8.9 113 63-230 57-177 (293)
85 3jwh_A HEN1; methyltransferase 98.3 2.8E-06 9.5E-11 76.1 10.4 104 64-228 30-141 (217)
86 3m70_A Tellurite resistance pr 98.3 6.4E-06 2.2E-10 77.0 13.2 138 63-299 120-259 (286)
87 3g07_A 7SK snRNA methylphospha 98.3 1.6E-06 5.4E-11 82.2 9.0 48 149-228 173-220 (292)
88 2gs9_A Hypothetical protein TT 98.3 4.2E-06 1.4E-10 74.4 11.0 135 63-287 36-170 (211)
89 2zfu_A Nucleomethylin, cerebra 98.3 1.7E-06 5.9E-11 77.3 8.1 69 149-300 111-179 (215)
90 1x19_A CRTF-related protein; m 98.3 1.2E-05 4.1E-10 78.0 14.8 153 62-300 189-348 (359)
91 1tw3_A COMT, carminomycin 4-O- 98.3 1.1E-05 3.8E-10 78.1 13.9 156 62-303 182-342 (360)
92 2p8j_A S-adenosylmethionine-de 98.2 4.5E-06 1.5E-10 73.8 9.7 110 63-234 23-134 (209)
93 3d2l_A SAM-dependent methyltra 98.2 3.7E-06 1.3E-10 76.0 8.8 45 151-230 94-139 (243)
94 3q87_B N6 adenine specific DNA 98.2 1.3E-05 4.6E-10 69.6 11.9 71 65-170 25-95 (170)
95 2avn_A Ubiquinone/menaquinone 98.2 2.3E-06 7.8E-11 79.2 7.2 160 63-301 54-214 (260)
96 1zg3_A Isoflavanone 4'-O-methy 98.2 9.2E-06 3.1E-10 78.9 11.8 149 64-300 194-347 (358)
97 1yzh_A TRNA (guanine-N(7)-)-me 98.2 2.4E-05 8.3E-10 70.0 13.3 165 64-297 42-210 (214)
98 3opn_A Putative hemolysin; str 98.1 7.6E-06 2.6E-10 75.5 8.2 67 210-301 119-185 (232)
99 1fp2_A Isoflavone O-methyltran 98.1 5.3E-05 1.8E-09 73.4 14.2 151 63-300 188-341 (352)
100 3mq2_A 16S rRNA methyltransfer 98.1 1.8E-05 6.2E-10 70.8 10.0 151 62-301 26-185 (218)
101 3hp7_A Hemolysin, putative; st 98.0 5.8E-05 2E-09 72.2 13.9 148 63-301 85-233 (291)
102 4df3_A Fibrillarin-like rRNA/T 98.0 3.5E-05 1.2E-09 71.5 11.0 108 63-231 77-185 (233)
103 1wzn_A SAM-dependent methyltra 97.9 8.8E-05 3E-09 67.5 12.4 104 63-230 41-147 (252)
104 2pxx_A Uncharacterized protein 97.9 2.9E-05 1E-09 68.4 8.9 121 63-232 42-163 (215)
105 2plw_A Ribosomal RNA methyltra 97.9 5.6E-05 1.9E-09 66.4 10.5 55 149-230 102-156 (201)
106 3hm2_A Precorrin-6Y C5,15-meth 97.9 5.8E-05 2E-09 64.7 10.3 102 62-231 24-130 (178)
107 2fca_A TRNA (guanine-N(7)-)-me 97.9 6.2E-05 2.1E-09 67.8 10.7 112 64-228 39-153 (213)
108 3bxo_A N,N-dimethyltransferase 97.9 9.5E-05 3.2E-09 66.4 11.8 105 63-232 40-145 (239)
109 3grz_A L11 mtase, ribosomal pr 97.9 2.8E-05 9.5E-10 68.9 7.8 19 64-82 61-79 (205)
110 3lbf_A Protein-L-isoaspartate 97.9 4.1E-05 1.4E-09 67.9 9.0 20 63-82 77-96 (210)
111 1ej0_A FTSJ; methyltransferase 97.9 2.7E-05 9.3E-10 65.9 7.4 113 63-231 22-139 (180)
112 1dus_A MJ0882; hypothetical pr 97.9 0.0001 3.5E-09 63.5 11.2 104 63-231 52-160 (194)
113 3mti_A RRNA methylase; SAM-dep 97.9 4.1E-05 1.4E-09 66.5 8.4 20 63-82 22-41 (185)
114 3dmg_A Probable ribosomal RNA 97.9 0.00015 5.1E-09 71.8 13.4 106 63-228 233-340 (381)
115 3dxy_A TRNA (guanine-N(7)-)-me 97.8 1.5E-05 5E-10 72.6 5.6 114 63-228 34-150 (218)
116 3iv6_A Putative Zn-dependent a 97.8 5.3E-05 1.8E-09 71.3 9.6 100 63-229 45-149 (261)
117 3q7e_A Protein arginine N-meth 97.8 3.3E-05 1.1E-09 75.2 7.7 99 64-225 67-170 (349)
118 3p9n_A Possible methyltransfer 97.8 0.00013 4.6E-09 63.7 10.9 110 63-233 44-158 (189)
119 3r0q_C Probable protein argini 97.8 0.0001 3.6E-09 72.4 10.8 103 62-228 62-169 (376)
120 3id6_C Fibrillarin-like rRNA/T 97.8 0.00014 4.6E-09 67.4 10.6 114 12-163 41-156 (232)
121 2fyt_A Protein arginine N-meth 97.7 8.6E-05 2.9E-09 72.0 9.3 100 63-225 64-168 (340)
122 1zx0_A Guanidinoacetate N-meth 97.7 7.6E-05 2.6E-09 67.8 8.2 107 63-229 60-171 (236)
123 1p91_A Ribosomal RNA large sub 97.7 0.00041 1.4E-08 63.9 13.0 98 63-232 85-182 (269)
124 3evz_A Methyltransferase; NYSG 97.7 0.0003 1E-08 63.1 11.5 124 63-230 55-181 (230)
125 1g6q_1 HnRNP arginine N-methyl 97.6 0.00024 8.3E-09 68.4 10.3 99 64-225 39-142 (328)
126 3eey_A Putative rRNA methylase 97.6 0.00011 3.7E-09 64.5 6.7 112 64-229 23-140 (197)
127 3p2e_A 16S rRNA methylase; met 97.6 0.00045 1.6E-08 62.9 11.0 153 63-301 24-186 (225)
128 2nyu_A Putative ribosomal RNA 97.6 0.00025 8.6E-09 61.8 8.8 117 64-231 23-148 (196)
129 3uwp_A Histone-lysine N-methyl 97.5 0.0004 1.4E-08 69.7 11.1 20 63-82 173-192 (438)
130 3sso_A Methyltransferase; macr 97.5 0.00036 1.2E-08 69.7 10.7 132 62-259 215-360 (419)
131 4dcm_A Ribosomal RNA large sub 97.5 0.00018 6.2E-09 70.9 8.5 106 64-228 223-334 (375)
132 1xdz_A Methyltransferase GIDB; 97.5 0.00039 1.3E-08 63.3 10.0 20 63-82 70-89 (240)
133 4hc4_A Protein arginine N-meth 97.5 0.00031 1.1E-08 69.5 9.2 20 206-225 167-186 (376)
134 3m33_A Uncharacterized protein 97.5 0.00023 8E-09 64.2 7.4 19 64-82 49-67 (226)
135 3ckk_A TRNA (guanine-N(7)-)-me 97.4 0.00018 6.2E-09 66.1 6.8 115 62-228 45-168 (235)
136 2pjd_A Ribosomal RNA small sub 97.4 3.8E-05 1.3E-09 74.4 2.1 105 65-229 198-304 (343)
137 1nt2_A Fibrillarin-like PRE-rR 97.4 0.00058 2E-08 61.5 9.8 20 63-82 57-76 (210)
138 3e05_A Precorrin-6Y C5,15-meth 97.4 0.00022 7.7E-09 63.0 6.8 102 63-230 40-144 (204)
139 1af7_A Chemotaxis receptor met 97.4 0.00022 7.6E-09 67.4 7.1 40 151-226 211-250 (274)
140 2nxc_A L11 mtase, ribosomal pr 97.4 0.00014 4.7E-09 67.5 5.6 19 64-82 121-139 (254)
141 1vbf_A 231AA long hypothetical 97.4 0.00021 7E-09 64.3 6.6 21 63-83 70-90 (231)
142 2yxe_A Protein-L-isoaspartate 97.4 0.00013 4.5E-09 64.8 5.0 80 63-166 77-159 (215)
143 1l3i_A Precorrin-6Y methyltran 97.4 0.00042 1.4E-08 59.5 7.8 20 63-82 33-52 (192)
144 3lpm_A Putative methyltransfer 97.3 0.00061 2.1E-08 62.8 9.1 123 63-228 49-176 (259)
145 1jg1_A PIMT;, protein-L-isoasp 97.3 0.00048 1.7E-08 62.4 8.2 19 64-82 92-110 (235)
146 2ozv_A Hypothetical protein AT 97.3 0.00061 2.1E-08 63.3 9.0 124 63-229 36-171 (260)
147 1o9g_A RRNA methyltransferase; 97.3 0.00088 3E-08 61.3 10.0 23 205-227 191-213 (250)
148 3orh_A Guanidinoacetate N-meth 97.3 0.00068 2.3E-08 62.0 9.1 24 205-228 147-170 (236)
149 3fzg_A 16S rRNA methylase; met 97.3 8.6E-05 2.9E-09 67.1 2.9 81 63-170 49-132 (200)
150 2ift_A Putative methylase HI07 97.3 0.00046 1.6E-08 61.3 7.5 18 65-82 55-72 (201)
151 4dzr_A Protein-(glutamine-N5) 97.3 0.00015 5.3E-09 63.6 4.3 128 62-230 29-166 (215)
152 3gjy_A Spermidine synthase; AP 97.3 0.00066 2.2E-08 65.7 8.8 113 61-230 87-202 (317)
153 3adn_A Spermidine synthase; am 97.3 0.00067 2.3E-08 64.7 8.7 110 62-229 82-199 (294)
154 3bwc_A Spermidine synthase; SA 97.3 0.00076 2.6E-08 64.3 8.8 109 62-228 94-210 (304)
155 2b3t_A Protein methyltransfera 97.2 0.0018 6E-08 60.3 10.7 123 63-228 109-238 (276)
156 2fpo_A Methylase YHHF; structu 97.2 0.001 3.6E-08 59.1 8.6 18 65-82 56-73 (202)
157 3gdh_A Trimethylguanosine synt 97.2 0.00011 3.6E-09 66.7 1.9 79 64-170 79-161 (241)
158 2frn_A Hypothetical protein PH 97.2 0.003 1E-07 59.2 11.6 99 64-231 126-228 (278)
159 1jsx_A Glucose-inhibited divis 97.1 0.0016 5.3E-08 57.3 9.1 98 64-229 66-166 (207)
160 2ipx_A RRNA 2'-O-methyltransfe 97.1 0.00082 2.8E-08 60.7 7.4 105 63-230 77-184 (233)
161 1dl5_A Protein-L-isoaspartate 97.1 0.0012 4E-08 63.0 8.6 79 64-166 76-157 (317)
162 1uir_A Polyamine aminopropyltr 97.1 0.00053 1.8E-08 65.8 5.6 111 63-229 77-196 (314)
163 2y1w_A Histone-arginine methyl 97.1 0.0012 4.1E-08 64.0 8.2 73 63-164 50-127 (348)
164 1fbn_A MJ fibrillarin homologu 97.1 0.0033 1.1E-07 56.7 10.6 20 63-82 74-93 (230)
165 1u2z_A Histone-lysine N-methyl 97.0 0.0059 2E-07 61.4 13.0 21 63-83 242-262 (433)
166 2b25_A Hypothetical protein; s 97.0 0.0024 8.2E-08 61.2 9.7 19 64-82 106-124 (336)
167 1g8a_A Fibrillarin-like PRE-rR 97.0 0.0016 5.6E-08 58.3 8.0 20 63-82 73-92 (227)
168 3bzb_A Uncharacterized protein 97.0 0.0013 4.5E-08 61.7 7.7 108 64-232 80-209 (281)
169 2xyq_A Putative 2'-O-methyl tr 97.0 0.0045 1.5E-07 59.0 11.3 106 63-230 63-173 (290)
170 2yxd_A Probable cobalt-precorr 97.0 0.0025 8.6E-08 54.2 8.5 20 63-82 35-54 (183)
171 2esr_A Methyltransferase; stru 97.0 0.00063 2.2E-08 58.4 4.6 20 63-82 31-50 (177)
172 2vdv_E TRNA (guanine-N(7)-)-me 96.9 0.0019 6.5E-08 59.0 7.8 114 63-228 49-173 (246)
173 2fhp_A Methylase, putative; al 96.9 0.00048 1.7E-08 59.3 3.6 20 63-82 44-63 (187)
174 2h00_A Methyltransferase 10 do 96.9 0.0033 1.1E-07 57.4 9.3 21 63-83 65-85 (254)
175 3mb5_A SAM-dependent methyltra 96.9 0.0076 2.6E-07 54.7 11.5 100 63-230 93-196 (255)
176 3fpf_A Mtnas, putative unchara 96.9 0.0041 1.4E-07 59.6 9.8 99 62-228 121-222 (298)
177 3u81_A Catechol O-methyltransf 96.8 0.0011 3.8E-08 59.4 5.3 19 64-82 59-77 (221)
178 1r18_A Protein-L-isoaspartate( 96.8 0.0019 6.5E-08 58.0 6.8 19 64-82 85-103 (227)
179 2pbf_A Protein-L-isoaspartate 96.8 0.00066 2.2E-08 60.8 3.6 82 64-165 81-174 (227)
180 3njr_A Precorrin-6Y methylase; 96.8 0.011 3.9E-07 52.5 11.7 21 63-83 55-75 (204)
181 3dou_A Ribosomal RNA large sub 96.8 0.0028 9.6E-08 56.1 7.6 25 206-230 117-141 (191)
182 1i9g_A Hypothetical protein RV 96.8 0.0048 1.6E-07 57.0 9.4 100 64-230 100-205 (280)
183 3htx_A HEN1; HEN1, small RNA m 96.8 0.0042 1.4E-07 67.2 10.1 108 63-231 721-837 (950)
184 2gpy_A O-methyltransferase; st 96.8 0.0012 4.2E-08 59.4 5.1 19 64-82 55-73 (233)
185 3g89_A Ribosomal RNA small sub 96.8 0.002 6.7E-08 59.6 6.5 21 62-82 79-99 (249)
186 1i1n_A Protein-L-isoaspartate 96.7 0.0022 7.6E-08 57.3 6.6 20 63-82 77-96 (226)
187 2p41_A Type II methyltransfera 96.7 0.0028 9.5E-08 60.6 7.5 19 64-82 83-101 (305)
188 1ws6_A Methyltransferase; stru 96.7 0.00076 2.6E-08 57.1 3.1 19 64-82 42-60 (171)
189 1yb2_A Hypothetical protein TA 96.7 0.0033 1.1E-07 58.4 7.8 100 62-229 109-212 (275)
190 2hnk_A SAM-dependent O-methylt 96.7 0.0016 5.3E-08 59.2 5.2 20 64-83 61-80 (239)
191 3ntv_A MW1564 protein; rossman 96.7 0.0012 4.2E-08 59.8 4.3 100 63-229 71-177 (232)
192 2i7c_A Spermidine synthase; tr 96.6 0.002 6.8E-08 60.7 5.8 108 63-229 78-193 (283)
193 2wa2_A Non-structural protein 96.6 0.0045 1.6E-07 58.3 8.2 20 63-82 82-101 (276)
194 2oxt_A Nucleoside-2'-O-methylt 96.6 0.0047 1.6E-07 57.9 8.2 20 63-82 74-93 (265)
195 2pwy_A TRNA (adenine-N(1)-)-me 96.6 0.0069 2.3E-07 54.9 9.1 100 63-229 96-199 (258)
196 1inl_A Spermidine synthase; be 96.6 0.0014 4.6E-08 62.4 4.4 109 63-228 90-205 (296)
197 1ixk_A Methyltransferase; open 96.6 0.0086 2.9E-07 57.2 10.1 125 64-231 119-249 (315)
198 3tfw_A Putative O-methyltransf 96.6 0.0014 4.8E-08 60.2 4.3 106 63-230 63-172 (248)
199 1xj5_A Spermidine synthase 1; 96.6 0.0023 7.9E-08 62.1 5.9 109 63-228 120-235 (334)
200 2bm8_A Cephalosporin hydroxyla 96.6 0.0052 1.8E-07 56.2 8.0 18 65-82 83-100 (236)
201 1mjf_A Spermidine synthase; sp 96.6 0.0025 8.5E-08 59.9 5.8 20 63-82 75-94 (281)
202 2ih2_A Modification methylase 96.5 0.02 6.9E-07 56.0 12.5 25 206-230 142-166 (421)
203 1o54_A SAM-dependent O-methylt 96.5 0.0043 1.5E-07 57.6 7.2 98 64-229 113-214 (277)
204 1iy9_A Spermidine synthase; ro 96.5 0.0043 1.5E-07 58.2 7.3 108 63-228 75-189 (275)
205 2b2c_A Spermidine synthase; be 96.5 0.0023 7.9E-08 61.5 5.3 108 63-228 108-222 (314)
206 3dr5_A Putative O-methyltransf 96.4 0.00093 3.2E-08 60.7 1.9 103 64-229 57-164 (221)
207 2pt6_A Spermidine synthase; tr 96.4 0.0038 1.3E-07 60.1 6.2 107 63-228 116-230 (321)
208 3lcv_B Sisomicin-gentamicin re 96.4 0.00098 3.3E-08 63.0 1.8 120 62-207 131-259 (281)
209 2o07_A Spermidine synthase; st 96.4 0.0022 7.6E-08 61.2 4.4 109 63-229 95-210 (304)
210 3tma_A Methyltransferase; thum 96.3 0.027 9.4E-07 54.2 11.7 113 63-229 203-318 (354)
211 2yxl_A PH0851 protein, 450AA l 96.3 0.016 5.5E-07 58.1 10.1 127 64-231 260-392 (450)
212 3ajd_A Putative methyltransfer 96.2 0.0066 2.3E-07 56.6 6.6 126 63-232 83-215 (274)
213 3frh_A 16S rRNA methylase; met 96.2 0.0015 5.2E-08 61.0 2.1 107 62-206 104-228 (253)
214 2frx_A Hypothetical protein YE 96.2 0.025 8.7E-07 57.4 11.0 127 63-231 117-249 (479)
215 3b3j_A Histone-arginine methyl 96.2 0.006 2E-07 62.0 6.3 20 63-82 158-177 (480)
216 2yvl_A TRMI protein, hypotheti 96.1 0.023 7.7E-07 51.1 9.5 20 63-82 91-110 (248)
217 3duw_A OMT, O-methyltransferas 96.1 0.0021 7.1E-08 57.4 2.4 20 63-82 58-77 (223)
218 3tr6_A O-methyltransferase; ce 96.1 0.0035 1.2E-07 55.8 3.9 19 64-82 65-83 (225)
219 1sqg_A SUN protein, FMU protei 96.1 0.011 3.6E-07 59.0 7.5 126 64-231 247-377 (429)
220 3r3h_A O-methyltransferase, SA 96.0 0.0031 1.1E-07 57.9 3.0 105 64-230 61-172 (242)
221 1nv8_A HEMK protein; class I a 95.9 0.016 5.6E-07 54.5 7.7 19 64-82 124-142 (284)
222 3lec_A NADB-rossmann superfami 95.9 0.11 3.7E-06 47.8 12.9 19 64-82 22-40 (230)
223 2igt_A SAM dependent methyltra 95.9 0.058 2E-06 52.0 11.5 28 204-231 248-275 (332)
224 3a27_A TYW2, uncharacterized p 95.8 0.025 8.5E-07 52.7 8.4 102 64-233 120-224 (272)
225 1wxx_A TT1595, hypothetical pr 95.8 0.052 1.8E-06 53.0 11.0 29 202-230 299-327 (382)
226 3m6w_A RRNA methylase; rRNA me 95.7 0.01 3.5E-07 60.1 5.4 127 63-231 101-232 (464)
227 2f8l_A Hypothetical protein LM 95.4 0.042 1.4E-06 52.7 8.6 127 62-230 129-258 (344)
228 1sui_A Caffeoyl-COA O-methyltr 95.4 0.0053 1.8E-07 56.5 1.9 20 63-82 79-98 (247)
229 2avd_A Catechol-O-methyltransf 95.3 0.0087 3E-07 53.3 3.2 20 63-82 69-88 (229)
230 3m4x_A NOL1/NOP2/SUN family pr 95.1 0.026 8.8E-07 57.1 6.3 127 63-231 105-237 (456)
231 3c3y_A Pfomt, O-methyltransfer 95.1 0.0069 2.3E-07 55.2 1.9 20 63-82 70-89 (237)
232 3cbg_A O-methyltransferase; cy 95.1 0.016 5.5E-07 52.4 4.3 19 64-82 73-91 (232)
233 1ne2_A Hypothetical protein TA 94.7 0.044 1.5E-06 47.8 5.9 75 63-168 51-125 (200)
234 3c3p_A Methyltransferase; NP_9 94.7 0.011 3.9E-07 52.1 2.1 19 64-82 57-75 (210)
235 3gnl_A Uncharacterized protein 94.6 0.12 4.1E-06 47.9 8.9 19 64-82 22-40 (244)
236 4dmg_A Putative uncharacterize 94.5 0.078 2.7E-06 52.4 7.8 29 202-230 300-328 (393)
237 2cmg_A Spermidine synthase; tr 94.3 0.066 2.2E-06 49.8 6.4 19 210-228 153-171 (262)
238 3gru_A Dimethyladenosine trans 94.3 0.089 3.1E-06 50.0 7.4 21 63-83 50-70 (295)
239 1zq9_A Probable dimethyladenos 94.2 0.2 6.8E-06 46.9 9.6 21 63-83 28-48 (285)
240 2as0_A Hypothetical protein PH 93.8 0.15 5E-06 49.9 8.2 30 202-231 309-338 (396)
241 2b78_A Hypothetical protein SM 93.6 0.14 4.6E-06 50.3 7.5 27 204-230 307-333 (385)
242 3k6r_A Putative transferase PH 93.3 0.36 1.2E-05 45.5 9.6 70 64-160 126-199 (278)
243 3tqs_A Ribosomal RNA small sub 93.2 0.16 5.6E-06 47.0 7.1 52 63-125 29-92 (255)
244 4gqb_A Protein arginine N-meth 93.2 0.35 1.2E-05 50.8 10.1 47 27-84 332-378 (637)
245 3v97_A Ribosomal RNA large sub 93.0 0.32 1.1E-05 51.6 9.7 28 204-231 633-660 (703)
246 4azs_A Methyltransferase WBDD; 92.9 0.088 3E-06 54.3 5.2 21 62-82 65-85 (569)
247 3evf_A RNA-directed RNA polyme 92.7 1.8 6.3E-05 40.7 13.3 19 64-82 75-93 (277)
248 2h1r_A Dimethyladenosine trans 92.4 0.11 3.7E-06 49.1 4.7 20 63-82 42-61 (299)
249 2qm3_A Predicted methyltransfe 92.0 0.83 2.9E-05 44.2 10.5 102 64-230 173-280 (373)
250 3kr9_A SAM-dependent methyltra 91.9 0.28 9.6E-06 44.8 6.5 19 64-82 16-34 (225)
251 1wy7_A Hypothetical protein PH 91.7 0.21 7.3E-06 43.3 5.4 77 63-168 49-127 (207)
252 3khk_A Type I restriction-modi 91.6 0.62 2.1E-05 47.9 9.5 143 64-229 245-396 (544)
253 3c0k_A UPF0064 protein YCCW; P 91.6 0.28 9.5E-06 48.0 6.6 26 205-230 316-341 (396)
254 2okc_A Type I restriction enzy 91.1 0.61 2.1E-05 46.3 8.7 22 209-230 288-309 (445)
255 1qam_A ERMC' methyltransferase 90.8 0.099 3.4E-06 47.8 2.4 21 63-83 30-50 (244)
256 2yx1_A Hypothetical protein MJ 90.7 0.22 7.6E-06 47.7 4.8 18 64-82 196-213 (336)
257 3gcz_A Polyprotein; flavivirus 90.5 1.4 4.8E-05 41.6 9.9 19 64-82 91-109 (282)
258 3tm4_A TRNA (guanine N2-)-meth 90.4 0.59 2E-05 45.3 7.7 19 64-82 218-236 (373)
259 3s1s_A Restriction endonucleas 90.1 1.8 6.3E-05 46.7 11.6 24 207-230 444-467 (878)
260 3fut_A Dimethyladenosine trans 89.5 0.43 1.5E-05 44.7 5.6 47 66-124 49-107 (271)
261 2qfm_A Spermine synthase; sper 89.5 0.32 1.1E-05 47.7 4.8 21 62-82 187-207 (364)
262 1uwv_A 23S rRNA (uracil-5-)-me 89.4 1.3 4.3E-05 43.9 9.3 20 64-83 287-306 (433)
263 3lkd_A Type I restriction-modi 89.3 1.5 5.3E-05 45.0 10.1 130 63-230 221-360 (542)
264 3eld_A Methyltransferase; flav 87.9 6.2 0.00021 37.5 12.4 21 62-82 80-100 (300)
265 1qyr_A KSGA, high level kasuga 87.2 0.97 3.3E-05 41.6 6.3 51 64-126 22-85 (252)
266 2dul_A N(2),N(2)-dimethylguano 84.6 0.7 2.4E-05 45.2 4.1 18 65-82 49-66 (378)
267 3axs_A Probable N(2),N(2)-dime 83.7 2.3 7.9E-05 41.8 7.5 51 20-83 22-72 (392)
268 3ftd_A Dimethyladenosine trans 83.6 0.79 2.7E-05 42.0 3.8 21 63-83 31-51 (249)
269 2b9e_A NOL1/NOP2/SUN domain fa 83.3 5.9 0.0002 37.4 10.0 19 64-82 103-121 (309)
270 2ar0_A M.ecoki, type I restric 83.1 2.4 8.1E-05 43.4 7.5 21 209-229 293-313 (541)
271 3uzu_A Ribosomal RNA small sub 82.9 1.2 3.9E-05 41.8 4.7 22 63-84 42-63 (279)
272 1yub_A Ermam, rRNA methyltrans 81.9 1.2 4E-05 40.3 4.2 21 63-83 29-49 (245)
273 3k0b_A Predicted N6-adenine-sp 79.1 6.7 0.00023 38.3 9.0 21 63-83 201-221 (393)
274 3ldg_A Putative uncharacterize 79.0 5.6 0.00019 38.8 8.3 20 64-83 195-214 (384)
275 3ldu_A Putative methylase; str 75.7 13 0.00045 36.0 9.9 22 63-84 195-216 (385)
276 2zig_A TTHA0409, putative modi 75.2 3.9 0.00013 38.1 5.7 27 203-229 72-98 (297)
277 2qy6_A UPF0209 protein YFCK; s 73.8 1.6 5.4E-05 40.4 2.6 24 62-85 59-82 (257)
278 3ua3_A Protein arginine N-meth 73.0 4 0.00014 43.4 5.7 46 26-85 386-431 (745)
279 1m6y_A S-adenosyl-methyltransf 70.2 2.4 8.2E-05 40.1 2.9 20 64-83 27-46 (301)
280 3ll7_A Putative methyltransfer 64.0 4.7 0.00016 39.9 3.8 20 64-83 94-113 (410)
281 2r6z_A UPF0341 protein in RSP 61.8 2.4 8.1E-05 39.1 1.1 20 64-83 84-103 (258)
282 4auk_A Ribosomal RNA large sub 56.6 24 0.00082 34.5 7.3 72 63-165 211-282 (375)
283 3bt7_A TRNA (uracil-5-)-methyl 56.5 8 0.00027 37.1 3.9 19 65-83 215-233 (369)
284 2k4m_A TR8_protein, UPF0146 pr 55.1 5.9 0.0002 33.9 2.3 19 64-82 36-55 (153)
285 3r24_A NSP16, 2'-O-methyl tran 54.3 36 0.0012 32.6 7.7 66 61-162 107-178 (344)
286 3lkz_A Non-structural protein 53.3 8 0.00027 36.9 3.1 36 64-121 95-130 (321)
287 2jjq_A Uncharacterized RNA met 52.7 5.3 0.00018 39.5 1.9 18 65-82 292-309 (425)
288 3p8z_A Mtase, non-structural p 48.8 14 0.00049 34.2 4.0 19 64-82 79-97 (267)
289 3vyw_A MNMC2; tRNA wobble urid 44.2 14 0.00047 35.2 3.2 24 62-85 95-118 (308)
290 2zig_A TTHA0409, putative modi 42.2 16 0.00056 33.8 3.4 20 64-83 236-255 (297)
291 2oyr_A UPF0341 protein YHIQ; a 38.8 9.2 0.00032 35.2 1.1 19 65-83 90-108 (258)
292 3o4f_A Spermidine synthase; am 33.8 1.3E+02 0.0045 28.1 8.2 109 62-228 82-198 (294)
293 3pvc_A TRNA 5-methylaminomethy 31.3 23 0.00079 36.8 2.8 24 61-84 56-79 (689)
294 3c6k_A Spermine synthase; sper 28.2 89 0.003 30.5 6.1 65 136-228 266-331 (381)
295 2px2_A Genome polyprotein [con 27.8 25 0.00085 32.8 2.0 21 62-82 72-92 (269)
296 3qua_A Putative uncharacterize 27.0 42 0.0015 29.6 3.3 41 245-288 158-198 (199)
297 1wek_A Hypothetical protein TT 24.7 79 0.0027 28.2 4.7 41 245-288 172-212 (217)
298 2a33_A Hypothetical protein; s 24.0 58 0.002 29.0 3.7 41 245-288 150-190 (215)
299 2v1n_A KIN17, protein KIN homo 23.7 34 0.0011 27.6 1.8 26 192-217 12-37 (111)
300 3ps9_A TRNA 5-methylaminomethy 23.5 38 0.0013 34.9 2.7 25 61-85 64-88 (676)
301 1q1h_A TFE, transcription fact 22.5 37 0.0013 26.1 1.9 43 246-288 47-93 (110)
302 2vz8_A Fatty acid synthase; tr 21.2 1.1E+02 0.0036 37.2 6.1 20 63-82 1240-1259(2512)
303 1t35_A Hypothetical protein YV 21.2 66 0.0023 28.0 3.4 41 245-288 138-178 (191)
No 1
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=1.7e-96 Score=728.56 Aligned_cols=340 Identities=34% Similarity=0.543 Sum_probs=310.7
Q ss_pred ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 11 ~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
+++++||+||+|++||++||.+|++++..++|++++||++++. ... .+++++|||||||+|+||+.+++.||++|+
T Consensus 3 ~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~-~~~---~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~ 78 (359)
T 1m6e_X 3 VRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYS-GDT---VTTRLAIADLGCSSGPNALFAVTELIKTVE 78 (359)
T ss_dssp CHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHS-SSS---SSSEECCEEESCCSSTTTTTGGGTTHHHHH
T ss_pred cccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccC---CCCceEEEecCCCCCcchHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999654 211 357899999999999999999999999999
Q ss_pred hhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----cceeeeccCCCcccccCCCCceeEEEecCCcccc
Q 017439 91 LIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWL 166 (371)
Q Consensus 91 ~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWL 166 (371)
+ +|++.+..+ .| +|||||||||+||||+||++||.. ++||++|||||||+||||++|+|++||++|||||
T Consensus 79 ~-~~~~~~~~~--~p---e~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWl 152 (359)
T 1m6e_X 79 E-LRKKMGREN--SP---EYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWL 152 (359)
T ss_dssp H-HHHSSSCSS--CC---EEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBC
T ss_pred H-HHHhcCCCC--CC---ceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhc
Confidence 9 987644114 77 999999999999999999999862 5799999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcCCCceeecCC-CHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcch
Q 017439 167 SKIPKEITNSNSPAWNRGHILCSGF-EKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTN 245 (371)
Q Consensus 167 S~vP~~l~d~~~~~~nkg~i~~~~~-~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~ 245 (371)
|++|+.+.+ |||+|||+++ +++|.+||++||++||+.||++|++||||||+||++++|+++.++.++ +.+.+
T Consensus 153 s~~p~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~-~~~~~ 225 (359)
T 1m6e_X 153 SQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRAST-ECCLI 225 (359)
T ss_dssp SSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSST-TTSTT
T ss_pred ccCchhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCcccc-chHHH
Confidence 999999887 9999999875 677889999999999999999999999999999999999999877654 45678
Q ss_pred HHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccc----------cccHHHHH
Q 017439 246 FDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM----------VYSAEFWA 315 (371)
Q Consensus 246 ~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~----------~~~~~~~a 315 (371)
|+.|.++|++||.+|+|++|++|+||+|+|+||++|++++|+++|+|+|+++|.+..+|... ...++.++
T Consensus 226 ~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~a 305 (359)
T 1m6e_X 226 WQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVA 305 (359)
T ss_dssp THHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHH
T ss_pred HHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHhh
Confidence 99999999999999999999999999999999999999999999999999999997777542 13467999
Q ss_pred HhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 316 SLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 316 ~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
+++||+++|++.+|||++++|+||+||++++++++++ ...++++++++|+||
T Consensus 306 ~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~----~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 306 RCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK----EKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHS----SCCEEEEEEEEEEBC
T ss_pred hhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhh----CCCceEEEEEEEEeC
Confidence 9999999999999999999999999999999999884 456789999999997
No 2
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=1.1e-95 Score=728.18 Aligned_cols=340 Identities=32% Similarity=0.516 Sum_probs=294.1
Q ss_pred ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 11 ~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
++++|||+||+|++||++||. |++++..++|++++||++++. ...| ...++++|||||||+|+||+.+++.||++|+
T Consensus 3 ~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~-~~~~-~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 3 LQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLR-ANLP-NINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHH-TTCT-TTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhh-cccC-CcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 889999999999999999999 999999999999999998553 2211 0123899999999999999999999999999
Q ss_pred hhhhcc--cCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC------------CcceeeeccCCCcccccCCCCceeE
Q 017439 91 LIKYQD--DCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL------------SKKYFATGVPGSFHGRLFPESSLHV 156 (371)
Q Consensus 91 ~~~~~~--~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~------------~~~~f~~gvpgSFy~rLfP~~Svd~ 156 (371)
+ +|++ .+ .+ .| +|||||||||+||||+||++||. .++||++|||||||+||||++|+|+
T Consensus 80 ~-~~~~~~~~-~~--~p---e~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~ 152 (384)
T 2efj_A 80 K-VGQEKKNE-LE--RP---TIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHF 152 (384)
T ss_dssp C-C-------------C---EEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEE
T ss_pred H-HhhhcccC-CC--CC---ceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEE
Confidence 9 8865 22 23 67 99999999999999999999984 2479999999999999999999999
Q ss_pred EEecCCccccCCCCccccCCCCCCcCCCceeecCC-CHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCC-
Q 017439 157 AHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGF-EKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDG- 234 (371)
Q Consensus 157 ~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~-~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~- 234 (371)
+||++||||||++|+.+.++.+++||||+|||+++ +|+|.+||++||++||+.||++|++||||||+||++++|+++.
T Consensus 153 v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~ 232 (384)
T 2efj_A 153 LHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEF 232 (384)
T ss_dssp EEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTT
T ss_pred EEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcc
Confidence 99999999999999999999999999999999865 6778999999999999999999999999999999999999987
Q ss_pred -CCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccc------
Q 017439 235 -IPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM------ 307 (371)
Q Consensus 235 -~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~------ 307 (371)
++.+ .+++.++|++|+.+|+|+++++|+||+|+|+||++|++++|+++|+|+|+++|.++.+|...
T Consensus 233 ~~~~~-------~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~ 305 (384)
T 2efj_A 233 DHPNS-------MDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDD 305 (384)
T ss_dssp CCCCH-------HHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---
T ss_pred cCccc-------HHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeeccccccccccc
Confidence 5432 24999999999999999999999999999999999999999999999999999997777532
Q ss_pred -------------cccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 308 -------------VYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 308 -------------~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
...++.+++++||+++|+|.+|||++|+|+||+||++++++++++ ...++++++++|+||
T Consensus 306 ~~~~~~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~----~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 306 YQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRS----GKGFYDSVIISLAKK 378 (384)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHH----TCCEEEEEEEEEEEC
T ss_pred ccccccccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhh----CCCceEEEEEEEEEc
Confidence 123578999999999999999999999999999999999999885 356789999999997
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=8.7e-95 Score=720.47 Aligned_cols=347 Identities=31% Similarity=0.528 Sum_probs=292.7
Q ss_pred ccceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 11 SPEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 11 ~~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
++++|||+||+|++||++||.+|++++..++|++++||++ +.+... ..+++++|||||||+|+||+.+++.||++|+
T Consensus 3 ~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~-l~~~~~--~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~ 79 (374)
T 3b5i_A 3 LERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLEN-VHLNSS--ASPPPFTAVDLGCSSGANTVHIIDFIVKHIS 79 (374)
T ss_dssp -----------------------CTTHHHHHHHHHHHHHT-SCCCCS--SSCCCEEEEEETCCSSHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHH-hhcccc--CCCCceEEEecCCCCChhHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999987 433321 0356899999999999999999999999999
Q ss_pred hhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC---------------cceeeeccCCCcccccCCCCcee
Q 017439 91 LIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS---------------KKYFATGVPGSFHGRLFPESSLH 155 (371)
Q Consensus 91 ~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~---------------~~~f~~gvpgSFy~rLfP~~Svd 155 (371)
+ +|+..+ .+ .| +|||+|||||+||||+||++|++. ++||++|||||||+||||++|+|
T Consensus 80 ~-~~~~~~-~~--~p---e~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d 152 (374)
T 3b5i_A 80 K-RFDAAG-ID--PP---EFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTID 152 (374)
T ss_dssp H-HHHHTT-CC--CC---CEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEE
T ss_pred H-HHhhcC-CC--CC---ceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceE
Confidence 9 887644 23 67 999999999999999999999863 45999999999999999999999
Q ss_pred EEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCC
Q 017439 156 VAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGI 235 (371)
Q Consensus 156 ~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~ 235 (371)
++||++||||||++|+.+.++.+++||||+|||++++|+|.+||++||++||..||++|++||||||+||++++|+++..
T Consensus 153 ~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~ 232 (374)
T 3b5i_A 153 FFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVD 232 (374)
T ss_dssp EEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSS
T ss_pred EEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999887
Q ss_pred CCCCCCCcchH-HHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecCcccc-------
Q 017439 236 PMFSTPEGTNF-DYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHPLVHM------- 307 (371)
Q Consensus 236 ~~~~~~~~~~~-~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p~~~~------- 307 (371)
+.++.+.+.+| ++|.++|++|+.||+++++++|+|++|+|+||++|++++|+++|+|+|+++|.+..+|+..
T Consensus 233 ~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~ 312 (374)
T 3b5i_A 233 PTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDA 312 (374)
T ss_dssp TTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCH
T ss_pred cccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchh
Confidence 76555556678 8999999999999999999999999999999999999999988899999999998777432
Q ss_pred cccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCC--eEEEEEEEE
Q 017439 308 VYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQD--KIELFVLLR 369 (371)
Q Consensus 308 ~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~--~~~~~~~L~ 369 (371)
...++.+++++||+++|++.+|||++++|+||+||+++++++++++ .++.+ .++++++|+
T Consensus 313 ~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 313 SEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDV--LVNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHH--HTTCCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHh--hhccccceEEEEEEeC
Confidence 1246899999999999999999999999999999999999999965 24455 799999985
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=1e-13 Score=130.31 Aligned_cols=202 Identities=17% Similarity=0.198 Sum_probs=132.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+.. . ..+|+..|+...-....=+.++ +-.|..+..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-------~-----------------~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d~- 109 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-------S-----------------GAEVLGTDNAATMIEKARQNYP--HLHFDVADA- 109 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-------T-----------------TCEEEEEESCHHHHHHHHHHCT--TSCEEECCT-
T ss_pred CCCEEEEecCCCCHHHHHHHh-------C-----------------CCeEEEEECCHHHHHHHHhhCC--CCEEEECCh-
Confidence 356999999999999887762 1 1256677765433222222221 223444432
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
..+-+++++|+++|+.++||+... ..+|+.-++-|+|||
T Consensus 110 ---~~~~~~~~fD~v~~~~~l~~~~d~--------------------------------------~~~l~~~~~~LkpgG 148 (279)
T 3ccf_A 110 ---RNFRVDKPLDAVFSNAMLHWVKEP--------------------------------------EAAIASIHQALKSGG 148 (279)
T ss_dssp ---TTCCCSSCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHEEEEE
T ss_pred ---hhCCcCCCcCEEEEcchhhhCcCH--------------------------------------HHHHHHHHHhcCCCc
Confidence 224446899999999999996431 236777788999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++.+.+.++. ....+.+...+.. .|.- ......|+++++.+++++++++.| |+++.++.+..
T Consensus 149 ~l~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 212 (279)
T 3ccf_A 149 RFVAEFGGKGNI--------KYILEALYNALET---LGIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNR 212 (279)
T ss_dssp EEEEEEECTTTT--------HHHHHHHHHHHHH---HTCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEEC
T ss_pred EEEEEecCCcch--------HHHHHHHHHHHHh---cCCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecc
Confidence 999998765432 0123333333332 2321 233456788999999999999987 99999888866
Q ss_pred CcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhh
Q 017439 303 PLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENM 350 (371)
Q Consensus 303 p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~ 350 (371)
++.. +.+.+.+..|+++...+++. .+.++..+++.+++.+.+.+..
T Consensus 213 ~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 258 (279)
T 3ccf_A 213 PTTL-AEGEFGMANWIQMFASAFLV-GLTPDQQVQLIRKVEATLQDKL 258 (279)
T ss_dssp CEEC-SSGGGHHHHHHHHHCHHHHT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cCCHHHHHHHHHHhhHHHhc-cCCHHHHHHHHHHHHHHHHhhc
Confidence 6532 22456677888876666654 4777788888888888777654
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=6.7e-13 Score=122.38 Aligned_cols=227 Identities=13% Similarity=0.196 Sum_probs=138.0
Q ss_pred CchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCC
Q 017439 24 HSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHD 103 (371)
Q Consensus 24 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~ 103 (371)
..|.+.+..|...... + ++. +. .....+|+|+|||+|..+..+. + ++
T Consensus 9 ~~y~~~~~~~~~~~~~---l----~~~-~~-------~~~~~~vLdiG~G~G~~~~~l~--------~-~~--------- 55 (259)
T 2p35_A 9 QQYLKFEDERTRPARD---L----LAQ-VP-------LERVLNGYDLGCGPGNSTELLT--------D-RY--------- 55 (259)
T ss_dssp GGGBCCCCGGGHHHHH---H----HTT-CC-------CSCCSSEEEETCTTTHHHHHHH--------H-HH---------
T ss_pred HHHHHHHHHHHHHHHH---H----HHh-cC-------CCCCCEEEEecCcCCHHHHHHH--------H-hC---------
Confidence 5688888777765442 2 211 21 2345689999999999988776 2 22
Q ss_pred CCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCC
Q 017439 104 NPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNR 183 (371)
Q Consensus 104 ~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nk 183 (371)
| ..+++..|+...--...-+..+ +--|..+. + ..+.|++++|+++|+.++||+..
T Consensus 56 -~---~~~v~~~D~s~~~~~~a~~~~~--~~~~~~~d---~-~~~~~~~~fD~v~~~~~l~~~~~--------------- 110 (259)
T 2p35_A 56 -G---VNVITGIDSDDDMLEKAADRLP--NTNFGKAD---L-ATWKPAQKADLLYANAVFQWVPD--------------- 110 (259)
T ss_dssp -C---TTSEEEEESCHHHHHHHHHHST--TSEEEECC---T-TTCCCSSCEEEEEEESCGGGSTT---------------
T ss_pred -C---CCEEEEEECCHHHHHHHHHhCC--CcEEEECC---h-hhcCccCCcCEEEEeCchhhCCC---------------
Confidence 1 1246666765443322222211 22344443 2 23347899999999999999632
Q ss_pred CceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCc
Q 017439 184 GHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIA 263 (371)
Q Consensus 184 g~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~ 263 (371)
...+|+.-.+-|+|||++++..++..+. .....+.++...+...
T Consensus 111 -----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ 154 (259)
T 2p35_A 111 -----------------------HLAVLSQLMDQLESGGVLAVQMPDNLQE-------------PTHIAMHETADGGPWK 154 (259)
T ss_dssp -----------------------HHHHHHHHGGGEEEEEEEEEEEECCTTS-------------HHHHHHHHHHHHSTTG
T ss_pred -----------------------HHHHHHHHHHhcCCCeEEEEEeCCCCCc-------------HHHHHHHHHhcCcchH
Confidence 2236788889999999999998654221 1112233333322211
Q ss_pred hhhhccc-CcccccCCHHHHHHHhhcCCceEEEEEEEe-ecCcccccccHHHHHHhHHHh-hhhhhhhhhcHHHHHHHHH
Q 017439 264 EEKVDSF-NVPMYYPFLGELMGHIKRNKNFSIEIMNTF-THPLVHMVYSAEFWASLSRAA-FGGLVGQHFGYQFVDRIFN 340 (371)
Q Consensus 264 ~e~~d~f-n~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~-~~p~~~~~~~~~~~a~~iRa~-~~~~l~~h~ge~i~delf~ 340 (371)
. ..... ..+..+++.+++++++++.| |+++..+.. ..+ ..+++.+..++++. +.+.+ ..+.++..+++.+
T Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ 227 (259)
T 2p35_A 155 D-AFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNHP----MKDADSIVEWVKGTGLRPYL-AAAGEENREAFLA 227 (259)
T ss_dssp G-GC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEEE----ESCHHHHHHHHTTTTTTHHH-HTTCGGGHHHHHH
T ss_pred H-HhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeeec----cCCchHHhhhhhcCcchHHH-HhCCHHHHHHHHH
Confidence 1 11111 23566789999999999987 987655543 222 23567788888864 34444 4678888889999
Q ss_pred HHHHHHHHhhh
Q 017439 341 YYSTKLAENMS 351 (371)
Q Consensus 341 r~~~~~~~~~~ 351 (371)
++.+.+.+.+.
T Consensus 228 ~~~~~~~~~~~ 238 (259)
T 2p35_A 228 DYTRRIAAAYP 238 (259)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhCC
Confidence 99888887654
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.44 E-value=1.7e-12 Score=119.71 Aligned_cols=221 Identities=12% Similarity=0.045 Sum_probs=134.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gv 140 (371)
...+|+|+|||+|..+..+. + + ..+++..|.-..--...-+.+.. .+--|..+.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d 94 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLI--------A-R---------------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQAD 94 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHH--------T-T---------------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESC
T ss_pred CCCEEEEeCCcCCHHHHHHH--------H-C---------------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcc
Confidence 45799999999999998776 2 1 01455566544332222222210 112233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+..--+|++++|+++++.++||+... ..+|+.-.+-|+|
T Consensus 95 ---~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~p 133 (263)
T 2yqz_A 95 ---ARAIPLPDESVHGVIVVHLWHLVPDW--------------------------------------PKVLAEAIRVLKP 133 (263)
T ss_dssp ---TTSCCSCTTCEEEEEEESCGGGCTTH--------------------------------------HHHHHHHHHHEEE
T ss_pred ---cccCCCCCCCeeEEEECCchhhcCCH--------------------------------------HHHHHHHHHHCCC
Confidence 22223678999999999999996431 2367777789999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHc-CCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANM-GLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~e-Gli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||++++.+...+ .. ....+...|.++... |.- ..-+...++.+++++.+++.| |+++..+.
T Consensus 134 gG~l~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 195 (263)
T 2yqz_A 134 GGALLEGWDQAE-AS---------PEWTLQERWRAFAAEEGFP-------VERGLHAKRLKEVEEALRRLG-LKPRTREV 195 (263)
T ss_dssp EEEEEEEEEEEC-CC---------HHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred CcEEEEEecCCC-cc---------HHHHHHHHHHHHHHHhCCC-------cccccccCCHHHHHHHHHHcC-CCcceEEE
Confidence 999999843321 10 101122333332221 211 112345678999999999987 99877765
Q ss_pred eecCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 300 FTHPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 300 ~~~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
.+.+. ..+.+.+..++++...+.. .+++++..+++.+++.+.+.+..... +....-...++++.-||
T Consensus 196 ~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~rk 262 (263)
T 2yqz_A 196 ARWRE---ERTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDL-DRPFPVEKRFLLRVSRL 262 (263)
T ss_dssp EEEEE---EECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCT-TSCEEEEEEEEEEEEEC
T ss_pred eeeec---CCCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCc-CccccccceeEEEeeec
Confidence 53222 3467778888877655554 46788888999999998888775432 11223345666666665
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.20 E-value=2.6e-09 Score=99.18 Aligned_cols=192 Identities=14% Similarity=0.109 Sum_probs=111.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... + ..+|+..|+-..--...=+. ... .+--|..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~---------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 117 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATA---------R--------------DVRVTGISISRPQVNQANARATAAGLANRVTFSY 117 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---------S--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHh---------c--------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 4579999999999999877631 1 11344445433221111111 110 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++..--+|++++|+++|+.++||+... ..+|+.-++-|
T Consensus 118 ~---d~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L 156 (273)
T 3bus_A 118 A---DAMDLPFEDASFDAVWALESLHHMPDR--------------------------------------GRALREMARVL 156 (273)
T ss_dssp C---CTTSCCSCTTCEEEEEEESCTTTSSCH--------------------------------------HHHHHHHHTTE
T ss_pred C---ccccCCCCCCCccEEEEechhhhCCCH--------------------------------------HHHHHHHHHHc
Confidence 2 233323678899999999999996331 23688888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+...+... ......+..+.. .+ -..+.++.+++++.+++.| |+++..+
T Consensus 157 ~pgG~l~i~~~~~~~~~~----------~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~l~~aG-f~~~~~~ 214 (273)
T 3bus_A 157 RPGGTVAIADFVLLAPVE----------GAKKEAVDAFRA----------GG-GVLSLGGIDEYESDVRQAE-LVVTSTV 214 (273)
T ss_dssp EEEEEEEEEEEEESSCCC----------HHHHHHHHHHHH----------HH-TCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCeEEEEEEeeccCCCC----------hhHHHHHHHHHh----------hc-CccCCCCHHHHHHHHHHcC-CeEEEEE
Confidence 999999999876543211 111112221110 01 1234789999999999987 9999888
Q ss_pred EeecCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHH
Q 017439 299 TFTHPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYST 344 (371)
Q Consensus 299 ~~~~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~ 344 (371)
.+...+. ..-..|...+++....+ ...+|++..+.+...+..
T Consensus 215 ~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 215 DISAQAR---PSLVKTAEAFENARSQV-EPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp ECHHHHT---THHHHHHHHHHHTHHHH-HHHHCHHHHHHHHHHHHH
T ss_pred ECcHhHH---HHHHHHHHHHHHhHHHH-HhhcCHHHHHHHHHHHHH
Confidence 7743221 12233444444433333 345777777777666654
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.16 E-value=9.1e-10 Score=100.00 Aligned_cols=171 Identities=13% Similarity=0.045 Sum_probs=112.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-cceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-KKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-~~~f~~gv 140 (371)
....+|+|+|||+|..+..+. + + .| ..+++..|+...-....-+.++.. +--|..+.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 100 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLM--------E-K----------YP---EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEAD 100 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHH--------H-h----------CC---CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCc
Confidence 446899999999999988776 3 2 12 346778887654433333333322 22344443
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+ ..+.+++++|+++++.++||+ |. .+...+|+.-++-|+|
T Consensus 101 ---~-~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~Lkp 140 (234)
T 3dtn_A 101 ---Y-SKYDFEEKYDMVVSALSIHHL---ED---------------------------------EDKKELYKRSYSILKE 140 (234)
T ss_dssp ---T-TTCCCCSCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEEE
T ss_pred ---h-hccCCCCCceEEEEeCccccC---CH---------------------------------HHHHHHHHHHHHhcCC
Confidence 3 333444999999999999996 32 1223467777889999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhccc---CcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSF---NVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f---n~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
||++++.....++.. .........|.....++..+.+++..+ .-..+.++.+|+++++++.| |++.++
T Consensus 141 gG~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~ 211 (234)
T 3dtn_A 141 SGIFINADLVHGETA--------FIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSC 211 (234)
T ss_dssp EEEEEEEEECBCSSH--------HHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEE
T ss_pred CcEEEEEEecCCCCh--------hhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceee
Confidence 999999887665431 133455666777766666666655432 12334578999999999988 998877
Q ss_pred EEeecC
Q 017439 298 NTFTHP 303 (371)
Q Consensus 298 e~~~~p 303 (371)
.....+
T Consensus 212 ~~~~~~ 217 (234)
T 3dtn_A 212 IYKYYQ 217 (234)
T ss_dssp EEEETT
T ss_pred eeeecc
Confidence 654433
No 9
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.06 E-value=4.2e-08 Score=92.97 Aligned_cols=213 Identities=14% Similarity=0.103 Sum_probs=115.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~~ 138 (371)
...+|+|+|||+|..++.+... + + .+|+..|+-.+-....=+.+ .-. +--|..
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~---------~----------~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 128 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAE---------Y----------D----VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI 128 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---------H----------C----CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHh---------C----------C----CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 3579999999999999887732 1 0 13555555433221111111 111 122444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+.. ..+ ++++|+++|+.++|++.+.. .... .+++..+|+.-.+-|
T Consensus 129 ~d~----~~~--~~~fD~v~~~~~~~~~~d~~-~~~~----------------------------~~~~~~~l~~~~~~L 173 (302)
T 3hem_A 129 QGW----EEF--DEPVDRIVSLGAFEHFADGA-GDAG----------------------------FERYDTFFKKFYNLT 173 (302)
T ss_dssp CCG----GGC--CCCCSEEEEESCGGGTTCCS-SCCC----------------------------TTHHHHHHHHHHHSS
T ss_pred CCH----HHc--CCCccEEEEcchHHhcCccc-cccc----------------------------hhHHHHHHHHHHHhc
Confidence 442 223 78999999999999965531 1000 156677899999999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccc-ccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPM-YYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++......+.......+....++ ...+.+. +....+|. +.|+.+|+.+.+++.| |+++.+
T Consensus 174 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~ 240 (302)
T 3hem_A 174 PDDGRMLLHTITIPDKEEAQELGLTSPMS--LLRFIKF----------ILTEIFPGGRLPRISQVDYYSSNAG-WKVERY 240 (302)
T ss_dssp CTTCEEEEEEEECCCHHHHHHHTCCCCHH--HHHHHHH----------HHHHTCTTCCCCCHHHHHHHHHHHT-CEEEEE
T ss_pred CCCcEEEEEEEeccCccchhhcccccccc--ccchHHH----------HHHhcCCCCCCCCHHHHHHHHHhCC-cEEEEE
Confidence 99999999987765321000000000000 0001111 11223343 6799999999999987 999999
Q ss_pred EEeecCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhh
Q 017439 298 NTFTHPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMS 351 (371)
Q Consensus 298 e~~~~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~ 351 (371)
+.+...+ ...-+.|...+++-...+. +.++++..+ .+..|-.-.+....
T Consensus 241 ~~~~~~y---~~tl~~w~~~~~~~~~~~~-~~~~~~~~~-~w~~yl~~~~~~f~ 289 (302)
T 3hem_A 241 HRIGANY---VPTLNAWADALQAHKDEAI-ALKGQETCD-IYMHYLRGCSDLFR 289 (302)
T ss_dssp EECGGGH---HHHHHHHHHHHHHTHHHHH-HHHCHHHHH-HHHHHHHHHHHHHH
T ss_pred EeCchhH---HHHHHHHHHHHHHhHHHHH-HHhCHHHHH-HHHHHHHHHHHHHh
Confidence 8763222 1122233333333322222 335655443 45555544444444
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.05 E-value=9.7e-09 Score=94.34 Aligned_cols=207 Identities=14% Similarity=0.108 Sum_probs=113.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+.. + .| . +|+..|+-..-....=+.+ .. .+-.|..
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~---------~----------~~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 102 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLAD---------Y----------VK---G-QITGIDLFPDFIEIFNENAVKANCADRVKGIT 102 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHH---------H----------CC---S-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHH---------h----------CC---C-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 346999999999999888772 1 11 2 4555555433222111111 11 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +..--+|++++|+++|+.++||+ . | ..+|+.-.+-|
T Consensus 103 ~d---~~~~~~~~~~fD~v~~~~~l~~~-~-~-------------------------------------~~~l~~~~~~L 140 (257)
T 3f4k_A 103 GS---MDNLPFQNEELDLIWSEGAIYNI-G-F-------------------------------------ERGMNEWSKYL 140 (257)
T ss_dssp CC---TTSCSSCTTCEEEEEEESCSCCC-C-H-------------------------------------HHHHHHHHTTE
T ss_pred CC---hhhCCCCCCCEEEEEecChHhhc-C-H-------------------------------------HHHHHHHHHHc
Confidence 33 22212578999999999999996 1 2 12577777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+....... ...+...|.... |. .++.+++.+.+++.| |+++...
T Consensus 141 ~pgG~l~~~~~~~~~~~~---------~~~~~~~~~~~~---------------~~-~~~~~~~~~~l~~aG-f~~v~~~ 194 (257)
T 3f4k_A 141 KKGGFIAVSEASWFTSER---------PAEIEDFWMDAY---------------PE-ISVIPTCIDKMERAG-YTPTAHF 194 (257)
T ss_dssp EEEEEEEEEEEEESSSCC---------CHHHHHHHHHHC---------------TT-CCBHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCcEEEEEEeeccCCCC---------hHHHHHHHHHhC---------------CC-CCCHHHHHHHHHHCC-CeEEEEE
Confidence 999999999865332211 122333343210 11 578999999999987 9998877
Q ss_pred Eee-cCcccccccHHHHHHhHHHhhhhhhhhhhcHHHHHHHHHHHHHHHHHhhhhhccCCCCCeEEEEEEEEeC
Q 017439 299 TFT-HPLVHMVYSAEFWASLSRAAFGGLVGQHFGYQFVDRIFNYYSTKLAENMSSICDGKTQDKIELFVLLRRN 371 (371)
Q Consensus 299 ~~~-~p~~~~~~~~~~~a~~iRa~~~~~l~~h~ge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 371 (371)
..+ .+|...... .++...+.+...+-++...+++.++..+..... .++ ....--.+++++|+
T Consensus 195 ~~~~~~w~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 195 ILPENCWTEHYFA------PQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKY----KDYYGYVFYIGQKR 257 (257)
T ss_dssp ECCGGGTCCCCCH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHH----TTTEEEEEEEEEEC
T ss_pred ECChhhHHHHHHH------HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHh----CCccceEEEEEecC
Confidence 664 344221111 111222222233334455555555554444322 222 11234456677774
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.04 E-value=4.9e-09 Score=96.94 Aligned_cols=154 Identities=14% Similarity=0.140 Sum_probs=91.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..+..+. + + . . +++..|+-..--...=+.+ ...+--|..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~--------~-~----------~----~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~ 92 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFA--------P-F----------V----K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQG 92 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHG--------G-G----------S----S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHHHH--------H-h----------C----C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe
Confidence 45799999999999887665 2 1 1 1 4555565432211111111 0011223333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. +..--+|++++|+++|+.++||+...+ .+|+.-.+-|+
T Consensus 93 d---~~~l~~~~~~fD~V~~~~~l~~~~d~~--------------------------------------~~l~~~~r~Lk 131 (260)
T 1vl5_A 93 D---AEQMPFTDERFHIVTCRIAAHHFPNPA--------------------------------------SFVSEAYRVLK 131 (260)
T ss_dssp C---C-CCCSCTTCEEEEEEESCGGGCSCHH--------------------------------------HHHHHHHHHEE
T ss_pred c---HHhCCCCCCCEEEEEEhhhhHhcCCHH--------------------------------------HHHHHHHHHcC
Confidence 3 222236889999999999999964321 26777778999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++.....++. + .+..+...+..+.. .......+.+++.+++++.| |++..++.
T Consensus 132 pgG~l~~~~~~~~~~-~--------~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 189 (260)
T 1vl5_A 132 KGGQLLLVDNSAPEN-D--------AFDVFYNYVEKERD------------YSHHRAWKKSDWLKMLEEAG-FELEELHC 189 (260)
T ss_dssp EEEEEEEEEEEBCSS-H--------HHHHHHHHHHHHHC------------TTCCCCCBHHHHHHHHHHHT-CEEEEEEE
T ss_pred CCCEEEEEEcCCCCC-H--------HHHHHHHHHHHhcC------------ccccCCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 999999986554322 1 12222222221111 01223568999999999977 99988887
Q ss_pred eecC
Q 017439 300 FTHP 303 (371)
Q Consensus 300 ~~~p 303 (371)
...+
T Consensus 190 ~~~~ 193 (260)
T 1vl5_A 190 FHKT 193 (260)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7543
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.01 E-value=7.7e-09 Score=94.80 Aligned_cols=155 Identities=15% Similarity=0.194 Sum_probs=91.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~ 138 (371)
....+|+|+|||+|..+..+. + . .+ +++..|+-..-....=+.+ ...+--|..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~--------~-~----------~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~ 75 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFS--------P-Y----------VQ-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQ 75 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHG--------G-G----------SS-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHH--------H-h----------CC-----EEEEEECCHHHHHHHHHHHHHcCCCCeEEEe
Confidence 446799999999999887665 2 1 11 3555555332221111111 001112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +..--+|++++|+++|+.++||+... ..+|+.-++-|
T Consensus 76 ~d---~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L 114 (239)
T 1xxl_A 76 GT---AESLPFPDDSFDIITCRYAAHHFSDV--------------------------------------RKAVREVARVL 114 (239)
T ss_dssp CB---TTBCCSCTTCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHE
T ss_pred cc---cccCCCCCCcEEEEEECCchhhccCH--------------------------------------HHHHHHHHHHc
Confidence 32 22222678999999999999996431 23677777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++.....++. + ..+.+.+.+..+. .+ ......+.+|+.+++++.| |++..++
T Consensus 115 kpgG~l~~~~~~~~~~-~--------~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~ll~~aG-f~~~~~~ 172 (239)
T 1xxl_A 115 KQDGRFLLVDHYAPED-P--------VLDEFVNHLNRLR-DP-----------SHVRESSLSEWQAMFSANQ-LAYQDIQ 172 (239)
T ss_dssp EEEEEEEEEEECBCSS-H--------HHHHHHHHHHHHH-CT-----------TCCCCCBHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCcEEEEEEcCCCCC-h--------hHHHHHHHHHHhc-cc-----------cccCCCCHHHHHHHHHHCC-CcEEEEE
Confidence 9999999987654322 1 1222222222111 11 1123468999999999987 9998888
Q ss_pred EeecC
Q 017439 299 TFTHP 303 (371)
Q Consensus 299 ~~~~p 303 (371)
....+
T Consensus 173 ~~~~~ 177 (239)
T 1xxl_A 173 KWNLP 177 (239)
T ss_dssp EEEEE
T ss_pred eecCc
Confidence 76443
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.00 E-value=2.5e-08 Score=91.61 Aligned_cols=153 Identities=16% Similarity=0.147 Sum_probs=96.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-Ccceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gv 140 (371)
....+|+|+|||+|..+..+... +. .+|+.-|+...-....-+.... .+--|..+.
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~---------~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 110 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEK---------YG--------------AHTHGIDICSNIVNMANERVSGNNKIIFEAND 110 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHH---------HC--------------CEEEEEESCHHHHHHHHHTCCSCTTEEEEECC
T ss_pred CCCCEEEEECCCCCHHHHHHHHH---------cC--------------CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECc
Confidence 34579999999999999887732 10 1355555544332222222221 112233333
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+..--+|++++|+|+|+.++||+ |. .|...+|+.-.+-|+|
T Consensus 111 ---~~~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~L~p 151 (266)
T 3ujc_A 111 ---ILTKEFPENNFDLIYSRDAILAL---SL---------------------------------ENKNKLFQKCYKWLKP 151 (266)
T ss_dssp ---TTTCCCCTTCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEEE
T ss_pred ---cccCCCCCCcEEEEeHHHHHHhc---Ch---------------------------------HHHHHHHHHHHHHcCC
Confidence 22223678999999999999995 31 3555688888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++..+..++..+ ....+...+. ..| ...++.+++++.+++.| |++...+.+
T Consensus 152 gG~l~~~~~~~~~~~~--------~~~~~~~~~~---~~~-------------~~~~~~~~~~~~l~~~G-f~~~~~~~~ 206 (266)
T 3ujc_A 152 TGTLLITDYCATEKEN--------WDDEFKEYVK---QRK-------------YTLITVEEYADILTACN-FKNVVSKDL 206 (266)
T ss_dssp EEEEEEEEEEESCGGG--------CCHHHHHHHH---HHT-------------CCCCCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred CCEEEEEEeccCCccc--------chHHHHHHHh---cCC-------------CCCCCHHHHHHHHHHcC-CeEEEEEeC
Confidence 9999999876654211 1122222221 111 23679999999999987 999888765
Q ss_pred e
Q 017439 301 T 301 (371)
Q Consensus 301 ~ 301 (371)
.
T Consensus 207 ~ 207 (266)
T 3ujc_A 207 S 207 (266)
T ss_dssp H
T ss_pred C
Confidence 3
No 14
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.98 E-value=6.8e-08 Score=90.48 Aligned_cols=160 Identities=16% Similarity=0.214 Sum_probs=89.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... + + . +|+..|+-.+--...=+.+ .. .+--|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~---------~----------~---~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEK---------Y----------D---V-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL 120 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---------H----------C---C-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE
T ss_pred CcCEEEEECCcccHHHHHHHHH---------c----------C---C-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 3569999999999998877621 1 0 1 3444444332211111111 00 1112222
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. + .. +| +++|+|+|..++|++.. +|+..+|+.-.+-|
T Consensus 121 ~d---~-~~-~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L 158 (287)
T 1kpg_A 121 AG---W-EQ-FD-EPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLL 158 (287)
T ss_dssp SC---G-GG-CC-CCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHS
T ss_pred CC---h-hh-CC-CCeeEEEEeCchhhcCh------------------------------------HHHHHHHHHHHHhc
Confidence 22 1 22 24 78999999999999532 23445788888899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcc-cccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVP-MYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++..+...+.......+....+.. ..+.+...+. ..| ...|+.+|+++.+++.| |+++..
T Consensus 159 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f~~~~~ 225 (287)
T 1kpg_A 159 PADGVMLLHTITGLHPKEIHERGLPMSFTF--ARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-FTVTRV 225 (287)
T ss_dssp CTTCEEEEEEEEECCHHHHTTTTCSCHHHH--HHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-CEEEEE
T ss_pred CCCCEEEEEEecCCCccccccccccccccc--cchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-cEEEEE
Confidence 999999999877643211000000000110 0111111111 112 24579999999999977 999988
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+.+
T Consensus 226 ~~~ 228 (287)
T 1kpg_A 226 QSL 228 (287)
T ss_dssp EEC
T ss_pred EeC
Confidence 765
No 15
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.94 E-value=5.5e-09 Score=93.78 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=100.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++.-|....--...=+.++ .+--|..+.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d-- 97 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLL--------L-A---------------GRTVYGIEPSREMRMIAKEKLP-KEFSITEGD-- 97 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHH--------H-T---------------TCEEEEECSCHHHHHHHHHHSC-TTCCEESCC--
T ss_pred CCCeEEEeCCCCCHHHHHHH--------h-C---------------CCeEEEEeCCHHHHHHHHHhCC-CceEEEeCC--
Confidence 35699999999999888776 2 1 1246666765543332222233 122233333
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+.+--+| +++|+++++.++||+.. | +...+|+.-.+-|+|||
T Consensus 98 -~~~~~~~-~~fD~v~~~~~l~~~~~-~-----------------------------------~~~~~l~~~~~~LkpgG 139 (220)
T 3hnr_A 98 -FLSFEVP-TSIDTIVSTYAFHHLTD-D-----------------------------------EKNVAIAKYSQLLNKGG 139 (220)
T ss_dssp -SSSCCCC-SCCSEEEEESCGGGSCH-H-----------------------------------HHHHHHHHHHHHSCTTC
T ss_pred -hhhcCCC-CCeEEEEECcchhcCCh-H-----------------------------------HHHHHHHHHHHhcCCCC
Confidence 3332344 99999999999999533 1 11336777888999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++..+...+. ......+..+...|.... ..-..+.++++.+|+++.+++.| |+++..+....
T Consensus 140 ~l~i~~~~~~~~------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~ 203 (220)
T 3hnr_A 140 KIVFADTIFADQ------------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLNHF 203 (220)
T ss_dssp EEEEEEECBSSH------------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECSSS
T ss_pred EEEEEeccccCh------------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEEEeeccce
Confidence 999997554332 223333444445554321 11122456789999999999987 99988876654
Q ss_pred Cc
Q 017439 303 PL 304 (371)
Q Consensus 303 p~ 304 (371)
.|
T Consensus 204 ~w 205 (220)
T 3hnr_A 204 VW 205 (220)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 16
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.93 E-value=6e-09 Score=92.50 Aligned_cols=143 Identities=16% Similarity=0.016 Sum_probs=94.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + ..+++.-|+-..--...=+..+ +--|..+ .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~---d 92 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLA--------S-L---------------GHQIEGLEPATRLVELARQTHP--SVTFHHG---T 92 (203)
T ss_dssp CSCEEEETCTTCHHHHHHH--------H-T---------------TCCEEEECCCHHHHHHHHHHCT--TSEEECC---C
T ss_pred CCeEEEecCCCCHHHHHHH--------h-c---------------CCeEEEEeCCHHHHHHHHHhCC--CCeEEeC---c
Confidence 4689999999999888776 2 1 0135555654322111111111 1123333 2
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCce
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGL 223 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 223 (371)
+..--+|++++|+++++.++|++.. +|...+|+.-++-|+|||+
T Consensus 93 ~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~ 136 (203)
T 3h2b_A 93 ITDLSDSPKRWAGLLAWYSLIHMGP------------------------------------GELPDALVALRMAVEDGGG 136 (203)
T ss_dssp GGGGGGSCCCEEEEEEESSSTTCCT------------------------------------TTHHHHHHHHHHTEEEEEE
T ss_pred ccccccCCCCeEEEEehhhHhcCCH------------------------------------HHHHHHHHHHHHHcCCCcE
Confidence 3332357899999999999999641 2445578888899999999
Q ss_pred EEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 224 LLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 224 lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
+++.......... ++....+.+..+.+|+++++++.| |+++.++.++.
T Consensus 137 l~i~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 137 LLMSFFSGPSLEP------------------------------MYHPVATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp EEEEEECCSSCEE------------------------------ECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred EEEEEccCCchhh------------------------------hhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 9999876544211 111223566789999999999987 99999988743
No 17
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.93 E-value=2.9e-08 Score=92.35 Aligned_cols=161 Identities=16% Similarity=0.174 Sum_probs=94.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~ 138 (371)
+...+|+|+|||+|..+..+. + + .| ..+++..|.-.+-....=+.+ ...+-.|..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 93 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILA--------K-N----------NP---DAEITSIDISPESLEKARENTEKNGIKNVKFLQ 93 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHH--------H-H----------CT---TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 346799999999999887766 2 1 12 236777776544322221111 111222333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ....-.+|++++|+|+++.++||+...+ .+|+.-.+-|
T Consensus 94 ~---d~~~~~~~~~~fD~v~~~~~l~~~~~~~--------------------------------------~~l~~~~~~L 132 (276)
T 3mgg_A 94 A---NIFSLPFEDSSFDHIFVCFVLEHLQSPE--------------------------------------EALKSLKKVL 132 (276)
T ss_dssp C---CGGGCCSCTTCEEEEEEESCGGGCSCHH--------------------------------------HHHHHHHHHE
T ss_pred c---ccccCCCCCCCeeEEEEechhhhcCCHH--------------------------------------HHHHHHHHHc
Confidence 3 2334446889999999999999964321 2677777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHH-HHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDL-ANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~m-v~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||.+++............ ......... ..+..+ ...|. ...+.+++..++++.| |++..+
T Consensus 133 ~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~l~~~l~~aG-f~~v~~ 195 (276)
T 3mgg_A 133 KPGGTITVIEGDHGSCYFHP--EGKKAIEAW-NCLIRVQAYMKG-------------NSLVGRQIYPLLQESG-FEKIRV 195 (276)
T ss_dssp EEEEEEEEEEECGGGCEEES--CCHHHHHHH-HHHHHHHHHTTC-------------CTTGGGGHHHHHHHTT-CEEEEE
T ss_pred CCCcEEEEEEcCCCCceECC--CcHHHHHHH-HHHHHHHHhcCC-------------CcchHHHHHHHHHHCC-CCeEEE
Confidence 99999999886543221000 011111111 122211 11121 1346689999999987 999888
Q ss_pred EEeec
Q 017439 298 NTFTH 302 (371)
Q Consensus 298 e~~~~ 302 (371)
+....
T Consensus 196 ~~~~~ 200 (276)
T 3mgg_A 196 EPRMV 200 (276)
T ss_dssp EEEEE
T ss_pred eeEEE
Confidence 87643
No 18
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.92 E-value=4.9e-08 Score=90.61 Aligned_cols=152 Identities=17% Similarity=0.122 Sum_probs=96.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~ 137 (371)
....+|+|+|||+|..++.+. + . | ..+|+..|+-..-....=+.+ .- .+--|.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~-~-----------~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 101 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLA--------G-H-----------V---TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGI 101 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------T-T-----------C---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------h-c-----------c---CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEE
Confidence 346799999999999988776 2 1 1 235667776544322221111 11 112344
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.+--+|++++|+|+|+.++|++ . | ..+|+.-.+-
T Consensus 102 ~~d---~~~~~~~~~~fD~i~~~~~~~~~-~-~-------------------------------------~~~l~~~~~~ 139 (267)
T 3kkz_A 102 VGS---MDDLPFRNEELDLIWSEGAIYNI-G-F-------------------------------------ERGLNEWRKY 139 (267)
T ss_dssp ECC---TTSCCCCTTCEEEEEESSCGGGT-C-H-------------------------------------HHHHHHHGGG
T ss_pred EcC---hhhCCCCCCCEEEEEEcCCceec-C-H-------------------------------------HHHHHHHHHH
Confidence 443 22222578999999999999996 2 2 1267778889
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++..+....... ...+...|.+ . .| ..++.+++.+.+++.| |+++..
T Consensus 140 LkpgG~l~~~~~~~~~~~~---------~~~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~ 193 (267)
T 3kkz_A 140 LKKGGYLAVSECSWFTDER---------PAEINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVAT 193 (267)
T ss_dssp EEEEEEEEEEEEEESSSCC---------CHHHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCCEEEEEEeeecCCCC---------hHHHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEE
Confidence 9999999999875432211 1223333431 1 12 3679999999999987 999988
Q ss_pred EEee-cCc
Q 017439 298 NTFT-HPL 304 (371)
Q Consensus 298 e~~~-~p~ 304 (371)
+.++ .+|
T Consensus 194 ~~~~~~~w 201 (267)
T 3kkz_A 194 FILPENCW 201 (267)
T ss_dssp EECCGGGT
T ss_pred EECCHhHH
Confidence 8774 344
No 19
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.90 E-value=1.4e-08 Score=92.47 Aligned_cols=141 Identities=16% Similarity=0.074 Sum_probs=96.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----cceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----KKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----~~~f~~g 139 (371)
..+|+|+|||+|..+..+. . + ..+|+..|.-..-....-+.++.. +--|..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~--------~-------------~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 122 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA--------S-------------P---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKE 122 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC--------B-------------T---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECC
T ss_pred CCCEEEeCCCCCHHHHHHH--------h-------------C---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEEC
Confidence 3599999999999888654 1 1 235777777554433332333221 1234444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. ...+.|++++|+++++.++||+. . +|...+|+.-++-|+
T Consensus 123 d----~~~~~~~~~fD~v~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~Lk 162 (235)
T 3lcc_A 123 D----VFTWRPTELFDLIFDYVFFCAIE---P---------------------------------EMRPAWAKSMYELLK 162 (235)
T ss_dssp C----TTTCCCSSCEEEEEEESSTTTSC---G---------------------------------GGHHHHHHHHHHHEE
T ss_pred c----hhcCCCCCCeeEEEEChhhhcCC---H---------------------------------HHHHHHHHHHHHHCC
Confidence 4 23355788999999999999953 2 344557888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++........ ..-|.|..+.+|+++++++.| |+++.++.
T Consensus 163 pgG~l~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 206 (235)
T 3lcc_A 163 PDGELITLMYPITDH-----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEE 206 (235)
T ss_dssp EEEEEEEEECCCSCC-----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEE
T ss_pred CCcEEEEEEeccccc-----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEe
Confidence 999999877654321 011345578999999999987 99999998
Q ss_pred eecCc
Q 017439 300 FTHPL 304 (371)
Q Consensus 300 ~~~p~ 304 (371)
.+.+.
T Consensus 207 ~~~~~ 211 (235)
T 3lcc_A 207 NPHAI 211 (235)
T ss_dssp CTTCC
T ss_pred cCCcc
Confidence 75443
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.90 E-value=1.1e-07 Score=89.45 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=91.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... + ..+++..|+...--...=+.+ .. .+--|..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~---------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 138 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRK---------F--------------GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY 138 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---------H--------------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHH---------h--------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 4579999999999999877621 1 014555555433211111111 10 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++..--+|++++|++++..++||+.. | ..+|+.-++-|
T Consensus 139 ~---d~~~~~~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~L 177 (297)
T 2o57_A 139 G---SFLEIPCEDNSYDFIWSQDAFLHSPD-K-------------------------------------LKVFQECARVL 177 (297)
T ss_dssp C---CTTSCSSCTTCEEEEEEESCGGGCSC-H-------------------------------------HHHHHHHHHHE
T ss_pred c---CcccCCCCCCCEeEEEecchhhhcCC-H-------------------------------------HHHHHHHHHHc
Confidence 3 33332367899999999999999644 1 13677778899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+...+..+. ..+...+.. +..| ..++.+++++++++.| |+++..+
T Consensus 178 kpgG~l~~~~~~~~~~~~~---------~~~~~~~~~--------------~~~~-~~~~~~~~~~~l~~aG-f~~~~~~ 232 (297)
T 2o57_A 178 KPRGVMAITDPMKEDGIDK---------SSIQPILDR--------------IKLH-DMGSLGLYRSLAKECG-LVTLRTF 232 (297)
T ss_dssp EEEEEEEEEEEEECTTCCG---------GGGHHHHHH--------------HTCS-SCCCHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCeEEEEEEeccCCCCch---------HHHHHHHHH--------------hcCC-CCCCHHHHHHHHHHCC-CeEEEEE
Confidence 9999999998765543210 011111211 1112 2579999999999987 9998887
Q ss_pred Eee
Q 017439 299 TFT 301 (371)
Q Consensus 299 ~~~ 301 (371)
.+.
T Consensus 233 ~~~ 235 (297)
T 2o57_A 233 SRP 235 (297)
T ss_dssp ECH
T ss_pred ECc
Confidence 663
No 21
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.87 E-value=6.9e-09 Score=98.18 Aligned_cols=160 Identities=12% Similarity=0.127 Sum_probs=90.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcce-e-
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKY-F- 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~-f- 136 (371)
....+|+|+|||+|..|+.++..+ .. ++. .- .+.+...|.-.+--...=+.+. ...++ |
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l----~~-~~~--------~~---~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~ 114 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKV----QA-QYP--------GV---CINNEVVEPSAEQIAKYKELVAKTSNLENVKFA 114 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHH----HH-HST--------TC---EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHH----Hh-hCC--------Cc---eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEE
Confidence 356899999999998776665433 22 210 00 2344777765544332222111 11111 1
Q ss_pred -eeccCCCccc---ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 137 -ATGVPGSFHG---RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 137 -~~gvpgSFy~---rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
..+..-.+-. +=++++++|+|+++.+|||+.+. ..+|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~--------------------------------------~~~l~ 156 (292)
T 2aot_A 115 WHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDI--------------------------------------PATLK 156 (292)
T ss_dssp EECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCH--------------------------------------HHHHH
T ss_pred EEecchhhhhhhhccccCCCceeEEEEeeeeeecCCH--------------------------------------HHHHH
Confidence 1221101111 11578999999999999995442 23577
Q ss_pred HHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCce
Q 017439 213 ARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNF 292 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F 292 (371)
.-++-|||||++++.....+. .|.. .|..... . +... -...+++.+|+.+.+++.| |
T Consensus 157 ~~~r~LkpgG~l~i~~~~~~~-----------~~~~---~~~~~~~-~-~~~~------~~~~~~~~~~~~~~l~~aG-f 213 (292)
T 2aot_A 157 FFHSLLGTNAKMLIIVVSGSS-----------GWDK---LWKKYGS-R-FPQD------DLCQYITSDDLTQMLDNLG-L 213 (292)
T ss_dssp HHHHTEEEEEEEEEEEECTTS-----------HHHH---HHHHHGG-G-SCCC------TTCCCCCHHHHHHHHHHHT-C
T ss_pred HHHHHcCCCcEEEEEEecCCc-----------cHHH---HHHHHHH-h-ccCC------CcccCCCHHHHHHHHHHCC-C
Confidence 777899999999998754321 1221 1222111 1 0000 1235688999999999987 9
Q ss_pred EEEEEE
Q 017439 293 SIEIMN 298 (371)
Q Consensus 293 ~I~~~e 298 (371)
++....
T Consensus 214 ~~~~~~ 219 (292)
T 2aot_A 214 KYECYD 219 (292)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 877643
No 22
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.87 E-value=4.5e-08 Score=88.06 Aligned_cols=168 Identities=15% Similarity=0.098 Sum_probs=98.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--------cc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--------KK 134 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--------~~ 134 (371)
...+|+|+|||+|..+..+... ..+++..|+...-....-+.+... +-
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 85 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK------------------------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKA 85 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC------------------------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcce
Confidence 4579999999999998877621 014555555433322222222110 11
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
-|..+. +..--+|++++|+++++.++|++.. | .++..+|+.-
T Consensus 86 ~~~~~d---~~~~~~~~~~~D~v~~~~~l~~~~~-~----------------------------------~~~~~~l~~~ 127 (235)
T 3sm3_A 86 EFKVEN---ASSLSFHDSSFDFAVMQAFLTSVPD-P----------------------------------KERSRIIKEV 127 (235)
T ss_dssp EEEECC---TTSCCSCTTCEEEEEEESCGGGCCC-H----------------------------------HHHHHHHHHH
T ss_pred EEEEec---ccccCCCCCceeEEEEcchhhcCCC-H----------------------------------HHHHHHHHHH
Confidence 233333 2222367899999999999999543 1 2233578888
Q ss_pred HhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcc--cCcccccCCHHHHHHHhhcCCce
Q 017439 215 AQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDS--FNVPMYYPFLGELMGHIKRNKNF 292 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~--fn~P~Y~ps~eE~~~~i~~~g~F 292 (371)
.+-|+|||++++..++.....+ .........+.....+|......... .....++++.+|+++++++.| |
T Consensus 128 ~~~L~pgG~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f 199 (235)
T 3sm3_A 128 FRVLKPGAYLYLVEFGQNWHLK-------LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-F 199 (235)
T ss_dssp HHHEEEEEEEEEEEEBCCTTSH-------HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-E
T ss_pred HHHcCCCeEEEEEECCcchhHH-------HHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-C
Confidence 8999999999999887643311 11122222222222222211110011 123356789999999999987 9
Q ss_pred EEEEEEEe
Q 017439 293 SIEIMNTF 300 (371)
Q Consensus 293 ~I~~~e~~ 300 (371)
+++.++..
T Consensus 200 ~~~~~~~~ 207 (235)
T 3sm3_A 200 EIDYFRVK 207 (235)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 99988875
No 23
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.86 E-value=1.5e-08 Score=95.31 Aligned_cols=101 Identities=17% Similarity=0.242 Sum_probs=65.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-cceeeeccCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-KKYFATGVPG 142 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-~~~f~~gvpg 142 (371)
.-+|+|+|||+|..|..+. + +. -+|+..|+-..- .+..... +-.|..+.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~--------~-~~---------------~~v~gvD~s~~m----l~~a~~~~~v~~~~~~-- 89 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLA--------E-FF---------------ERVHAVDPGEAQ----IRQALRHPRVTYAVAP-- 89 (257)
T ss_dssp SSEEEEESCTTTTTHHHHH--------T-TC---------------SEEEEEESCHHH----HHTCCCCTTEEEEECC--
T ss_pred CCCEEEEcCCCCHHHHHHH--------H-hC---------------CEEEEEeCcHHh----hhhhhhcCCceeehhh--
Confidence 3589999999999988776 3 11 146666654322 1111111 22344443
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+-.--+|++|+|+|+|+.++||+. |+ .||+.-++-|||||
T Consensus 90 -~e~~~~~~~sfD~v~~~~~~h~~~--~~-------------------------------------~~~~e~~rvLkpgG 129 (257)
T 4hg2_A 90 -AEDTGLPPASVDVAIAAQAMHWFD--LD-------------------------------------RFWAELRRVARPGA 129 (257)
T ss_dssp -TTCCCCCSSCEEEEEECSCCTTCC--HH-------------------------------------HHHHHHHHHEEEEE
T ss_pred -hhhhcccCCcccEEEEeeehhHhh--HH-------------------------------------HHHHHHHHHcCCCC
Confidence 333336999999999999999953 11 25666677899999
Q ss_pred eEEEEecCcCCC
Q 017439 223 LLLLLTPTIRDG 234 (371)
Q Consensus 223 ~lvl~~~gr~~~ 234 (371)
+|++...+....
T Consensus 130 ~l~~~~~~~~~~ 141 (257)
T 4hg2_A 130 VFAAVTYGLTRV 141 (257)
T ss_dssp EEEEEEECCCBC
T ss_pred EEEEEECCCCCC
Confidence 999988776543
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.85 E-value=4.3e-08 Score=87.30 Aligned_cols=158 Identities=15% Similarity=0.081 Sum_probs=91.0
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCc
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSF 144 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSF 144 (371)
.+|+|+|||+|..+..+... . .+++..|+...--... +.....+--|..+. +
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~------~------------------~~v~~~D~s~~~~~~a-~~~~~~~~~~~~~d---~ 99 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL------A------------------DRVTALDGSAEMIAEA-GRHGLDNVEFRQQD---L 99 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH------S------------------SEEEEEESCHHHHHHH-GGGCCTTEEEEECC---T
T ss_pred CeEEEECCCCCHHHHHHHhc------C------------------CeEEEEeCCHHHHHHH-HhcCCCCeEEEecc---c
Confidence 49999999999988877621 0 1455555543321111 11111122344444 2
Q ss_pred ccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceE
Q 017439 145 HGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLL 224 (371)
Q Consensus 145 y~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 224 (371)
..++|++++|+++++.++||+ |. .++..+|+.-.+-|+|||++
T Consensus 100 -~~~~~~~~~D~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~L~pgG~l 142 (218)
T 3ou2_A 100 -FDWTPDRQWDAVFFAHWLAHV---PD---------------------------------DRFEAFWESVRSAVAPGGVV 142 (218)
T ss_dssp -TSCCCSSCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred -ccCCCCCceeEEEEechhhcC---CH---------------------------------HHHHHHHHHHHHHcCCCeEE
Confidence 334899999999999999995 32 22445788888999999999
Q ss_pred EEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 225 LLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 225 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++...++..... ...+......... ..+. .-..+.....+++.+|+++++++.| |+++..+..
T Consensus 143 ~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 205 (218)
T 3ou2_A 143 EFVDVTDHERRL---------EQQDDSEPEVAVR-RTLQ--DGRSFRIVKVFRSPAELTERLTALG-WSCSVDEVH 205 (218)
T ss_dssp EEEEECCCC---------------------CEEE-EECT--TSCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEeCCCCcccc---------chhhhccccccee-eecC--CcchhhHhhcCCCHHHHHHHHHHCC-CEEEeeecc
Confidence 999987743210 0000000000000 0000 0000111233679999999999987 998877765
No 25
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.85 E-value=3.9e-08 Score=92.21 Aligned_cols=163 Identities=14% Similarity=0.148 Sum_probs=95.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC----Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL----SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~----~~~~f~~ 138 (371)
+..+|+|+|||+|..+..+... ..+|+..|+-..-....=+.+.. .+--|..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 123 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER------------------------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIH 123 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC------------------------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 3679999999999988877621 01455555543322222111111 1112333
Q ss_pred ccCCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 139 GVPGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 139 gvpgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+. +..-. ++++++|+|+++.++||+... ..+|+.-++-
T Consensus 124 ~d---~~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~ 162 (285)
T 4htf_A 124 CA---AQDVASHLETPVDLILFHAVLEWVADP--------------------------------------RSVLQTLWSV 162 (285)
T ss_dssp SC---GGGTGGGCSSCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHT
T ss_pred cC---HHHhhhhcCCCceEEEECchhhcccCH--------------------------------------HHHHHHHHHH
Confidence 33 22222 578999999999999996321 2367788899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++......... ....+...|.. ...+..... .....|.++.+.+|+++++++.| |+++..
T Consensus 163 LkpgG~l~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~ 229 (285)
T 4htf_A 163 LRPGGVLSLMFYNAHGLL---------MHNMVAGNFDY-VQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGK 229 (285)
T ss_dssp EEEEEEEEEEEEBHHHHH---------HHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEE
T ss_pred cCCCeEEEEEEeCCchHH---------HHHHHhcCHHH-Hhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-Cceeee
Confidence 999999999987654210 00111111211 122222111 11223567789999999999987 999998
Q ss_pred EEeecC
Q 017439 298 NTFTHP 303 (371)
Q Consensus 298 e~~~~p 303 (371)
+.+..+
T Consensus 230 ~~~~~~ 235 (285)
T 4htf_A 230 TGVRVF 235 (285)
T ss_dssp EEESSS
T ss_pred eeEEEe
Confidence 887433
No 26
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.82 E-value=2.8e-08 Score=89.95 Aligned_cols=152 Identities=13% Similarity=0.075 Sum_probs=92.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + -+ +|+..|+...--...=+..+. +--|..+.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~--------~-~----------~~-----~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d--- 94 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQ--------E-H----------FN-----DITCVEASEEAISHAQGRLKD-GITYIHSR--- 94 (250)
T ss_dssp SSCEEEESCTTSHHHHHHT--------T-T----------CS-----CEEEEESCHHHHHHHHHHSCS-CEEEEESC---
T ss_pred CCcEEEECCCCCHHHHHHH--------H-h----------CC-----cEEEEeCCHHHHHHHHHhhhC-CeEEEEcc---
Confidence 3579999999999887665 2 1 11 356666654432222222222 22344444
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH-hhcccCc
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA-QELVPGG 222 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra-~EL~pGG 222 (371)
...++|++++|+++++.+||++... ..+|+.-+ +-|+|||
T Consensus 95 -~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~~LkpgG 135 (250)
T 2p7i_A 95 -FEDAQLPRRYDNIVLTHVLEHIDDP--------------------------------------VALLKRINDDWLAEGG 135 (250)
T ss_dssp -GGGCCCSSCEEEEEEESCGGGCSSH--------------------------------------HHHHHHHHHTTEEEEE
T ss_pred -HHHcCcCCcccEEEEhhHHHhhcCH--------------------------------------HHHHHHHHHHhcCCCC
Confidence 3344789999999999999996431 23677777 8999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhh----hcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEK----VDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~----~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
++++..+..... ..... . ..|...... .+...-.....+.+++++++++.| |++++.+
T Consensus 136 ~l~i~~~~~~~~-----------~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~ 197 (250)
T 2p7i_A 136 RLFLVCPNANAV-----------SRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRS 197 (250)
T ss_dssp EEEEEEECTTCH-----------HHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEEcCChHHH-----------HHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEe
Confidence 999988654321 11111 1 123222110 000111223579999999999987 9998887
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
.+
T Consensus 198 ~~ 199 (250)
T 2p7i_A 198 GI 199 (250)
T ss_dssp EE
T ss_pred ee
Confidence 65
No 27
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.80 E-value=7.7e-08 Score=90.47 Aligned_cols=161 Identities=16% Similarity=0.182 Sum_probs=92.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCCCcc-eeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPLSKK-YFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~~~~-~f~~g 139 (371)
.-+|+|+|||+|..|+.+. + ++. .| ..+|+.-|+-..--... +.......+ -|..|
T Consensus 71 ~~~vLDlGcGtG~~~~~la--------~-~~~--------~~---~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~ 130 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVR--------R-NIH--------HD---NCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG 130 (261)
T ss_dssp TCEEEEETCTTTHHHHHHH--------H-TCC--------SS---SCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHH--------H-hcC--------CC---CCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec
Confidence 4699999999999998776 3 221 22 34677777654322111 111111112 24444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. ... +|.++.|+++|+++|||+ |. .|...+|+.-++-|+
T Consensus 131 D----~~~-~~~~~~d~v~~~~~l~~~---~~---------------------------------~~~~~~l~~i~~~Lk 169 (261)
T 4gek_A 131 D----IRD-IAIENASMVVLNFTLQFL---EP---------------------------------SERQALLDKIYQGLN 169 (261)
T ss_dssp C----TTT-CCCCSEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHEE
T ss_pred c----ccc-ccccccccceeeeeeeec---Cc---------------------------------hhHhHHHHHHHHHcC
Confidence 3 122 355679999999999995 42 234457888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCchhhhc----ccCcccccCCHHHHHHHhhcCCceEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN-MGLIAEEKVD----SFNVPMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d----~fn~P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
|||+|++.-...... ....+.+...+.+... .|+ ++.++. ...-.....|.+|+++.+++.| |+-
T Consensus 170 pGG~lii~e~~~~~~--------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ 239 (261)
T 4gek_A 170 PGGALVLSEKFSFED--------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FEH 239 (261)
T ss_dssp EEEEEEEEEEBCCSS--------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSE
T ss_pred CCcEEEEEeccCCCC--------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCe
Confidence 999999875443321 1122333344443332 233 222211 1111223458999999999987 864
Q ss_pred E
Q 017439 295 E 295 (371)
Q Consensus 295 ~ 295 (371)
.
T Consensus 240 v 240 (261)
T 4gek_A 240 S 240 (261)
T ss_dssp E
T ss_pred E
Confidence 3
No 28
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.77 E-value=3.7e-08 Score=90.46 Aligned_cols=168 Identities=13% Similarity=0.098 Sum_probs=95.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + + .+ . +++..|+...--...=+.+...+--|..+.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~--------~-~----------~~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d- 98 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAA--------E-H----------GA---K-KVLGIDLSERMLTEAKRKTTSPVVCYEQKA- 98 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------H-T----------TC---S-EEEEEESCHHHHHHHHHHCCCTTEEEEECC-
T ss_pred cCCCEEEEECCCCCHHHHHHH--------H-c----------CC---C-EEEEEECCHHHHHHHHHhhccCCeEEEEcc-
Confidence 356899999999998887766 2 1 11 2 567777654332222222221222344433
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+..--+|++++|+|+++.++||+.. ...+|+.-++-|+||
T Consensus 99 --~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lkpg 138 (253)
T 3g5l_A 99 --IEDIAIEPDAYNVVLSSLALHYIAS--------------------------------------FDDICKKVYINLKSS 138 (253)
T ss_dssp --GGGCCCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEE
T ss_pred --hhhCCCCCCCeEEEEEchhhhhhhh--------------------------------------HHHHHHHHHHHcCCC
Confidence 2222357899999999999999632 223677788899999
Q ss_pred ceEEEEecCcCCCCCC------CCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 222 GLLLLLTPTIRDGIPM------FSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~------~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|++++........... ...+....+ .+.....++.... .+..-....|.+|.+|+++++++.| |+++
T Consensus 139 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~ 211 (253)
T 3g5l_A 139 GSFIFSVEHPVFTADGRQDWYTDETGNKLHW-----PVDRYFNESMRTS-HFLGEDVQKYHRTVTTYIQTLLKNG-FQIN 211 (253)
T ss_dssp EEEEEEEECHHHHSSSSCSCEECSSCCEEEE-----EECCTTCCCEEEE-EETTEEEEEECCCHHHHHHHHHHTT-EEEE
T ss_pred cEEEEEeCCCccccCccccceeccCCceEEE-----EeccccccceEEE-eeccccCccEecCHHHHHHHHHHcC-Ceee
Confidence 9999986532110000 000000000 0000011111100 0111135567789999999999988 9998
Q ss_pred EEEEe
Q 017439 296 IMNTF 300 (371)
Q Consensus 296 ~~e~~ 300 (371)
.++..
T Consensus 212 ~~~e~ 216 (253)
T 3g5l_A 212 SVIEP 216 (253)
T ss_dssp EEECC
T ss_pred eeecC
Confidence 88755
No 29
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.76 E-value=2.3e-07 Score=86.65 Aligned_cols=163 Identities=16% Similarity=0.161 Sum_probs=93.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC----cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS----KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~----~~~f~~ 138 (371)
...+|+|+|||+|..+..+... . ..+++..|+...--...-+.++.. +--|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~----------~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 120 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA----------G-------------IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRA 120 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH----------T-------------CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC----------C-------------CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEE
Confidence 3579999999999998875521 0 114555555433322221111111 112333
Q ss_pred ccCCCcccccC-CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 139 GVPGSFHGRLF-PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 139 gvpgSFy~rLf-P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+. +..--+ |++++|+|+++.++||+-.. ..|...+|+.-++-
T Consensus 121 ~d---~~~~~~~~~~~fD~v~~~~~l~~~~~~----------------------------------~~~~~~~l~~~~~~ 163 (298)
T 1ri5_A 121 QD---SYGRHMDLGKEFDVISSQFSFHYAFST----------------------------------SESLDIAQRNIARH 163 (298)
T ss_dssp SC---TTTSCCCCSSCEEEEEEESCGGGGGSS----------------------------------HHHHHHHHHHHHHT
T ss_pred CC---ccccccCCCCCcCEEEECchhhhhcCC----------------------------------HHHHHHHHHHHHHh
Confidence 32 222223 68899999999999995211 13556688888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHH-HcC----------CCch---hhh-----cc-cCcccccC
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLA-NMG----------LIAE---EKV-----DS-FNVPMYYP 277 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv-~eG----------li~~---e~~-----d~-fn~P~Y~p 277 (371)
|+|||++++..+.... +...+.... ... .+.. .++ +. -..|.++.
T Consensus 164 LkpgG~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 228 (298)
T 1ri5_A 164 LRPGGYFIMTVPSRDV---------------ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFV 228 (298)
T ss_dssp EEEEEEEEEEEECHHH---------------HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECC
T ss_pred cCCCCEEEEEECCHHH---------------HHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCccccc
Confidence 9999999999865421 000011000 000 0000 000 00 02345778
Q ss_pred CHHHHHHHhhcCCceEEEEEEEee
Q 017439 278 FLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 278 s~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+++|+++++++.| |+++..+.+.
T Consensus 229 ~~~~l~~ll~~aG-f~~v~~~~~~ 251 (298)
T 1ri5_A 229 DFTRMVDGFKRLG-LSLVERKGFI 251 (298)
T ss_dssp CHHHHHHHHHTTT-EEEEEEEEHH
T ss_pred CHHHHHHHHHHcC-CEEEEecCHH
Confidence 9999999999987 9998887663
No 30
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.75 E-value=4.1e-08 Score=87.69 Aligned_cols=140 Identities=16% Similarity=0.161 Sum_probs=92.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++..|+-..-....-+.+ +--+..+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~---~~~~~~~d-- 93 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAML--------A-A---------------GFDVDATDGSPELAAEASRRL---GRPVRTML-- 93 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHHHH---TSCCEECC--
T ss_pred CCCcEEEECCCCCHHHHHHH--------H-c---------------CCeEEEECCCHHHHHHHHHhc---CCceEEee--
Confidence 35699999999999888776 2 1 124666666443322221111 11222332
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
...+-+++++|+++++.++|++. . +|+..+|+.-++-|+|||
T Consensus 94 --~~~~~~~~~fD~v~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~LkpgG 135 (211)
T 3e23_A 94 --FHQLDAIDAYDAVWAHACLLHVP---R---------------------------------DELADVLKLIWRALKPGG 135 (211)
T ss_dssp --GGGCCCCSCEEEEEECSCGGGSC---H---------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred --eccCCCCCcEEEEEecCchhhcC---H---------------------------------HHHHHHHHHHHHhcCCCc
Confidence 23344899999999999999953 1 355668888889999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++++.+........ +.+...+.+.+.+++++++++.|.|+++.++..
T Consensus 136 ~l~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 136 LFYASYKSGEGEGR-------------------------------DKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EEEEEEECCSSCEE-------------------------------CTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred EEEEEEcCCCcccc-------------------------------cccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 99999754432110 112223457899999999998654998888765
No 31
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.75 E-value=5e-08 Score=89.12 Aligned_cols=142 Identities=11% Similarity=0.058 Sum_probs=90.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + + .+|+..|+-..-....-+. --+.. +
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~--------~-~----~-----------~~v~gvD~s~~~~~~a~~~-----~~~~~---~ 88 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCK--------E-E----G-----------IESIGVDINEDMIKFCEGK-----FNVVK---S 88 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHH--------H-H----T-----------CCEEEECSCHHHHHHHHTT-----SEEEC---S
T ss_pred CCCeEEEEeCCCCHHHHHHH--------h-C----C-----------CcEEEEECCHHHHHHHHhh-----cceee---c
Confidence 45799999999999887555 2 1 0 1355666543322211111 11222 2
Q ss_pred Ccccc--cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 143 SFHGR--LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 143 SFy~r--LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
....- -+|++++|+|+|+.++||+. . .|+..+|+.-.+-|+|
T Consensus 89 d~~~~~~~~~~~~fD~i~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~Lkp 132 (240)
T 3dli_A 89 DAIEYLKSLPDKYLDGVMISHFVEHLD---P---------------------------------ERLFELLSLCYSKMKY 132 (240)
T ss_dssp CHHHHHHTSCTTCBSEEEEESCGGGSC---G---------------------------------GGHHHHHHHHHHHBCT
T ss_pred cHHHHhhhcCCCCeeEEEECCchhhCC---c---------------------------------HHHHHHHHHHHHHcCC
Confidence 22221 36889999999999999953 1 3455688888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++..++... ... +...+ +. .-..+.++.+++++++++.| |++...+.+
T Consensus 133 gG~l~~~~~~~~~-----------~~~-~~~~~--------~~-------~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~ 184 (240)
T 3dli_A 133 SSYIVIESPNPTS-----------LYS-LINFY--------ID-------PTHKKPVHPETLKFILEYLG-FRDVKIEFF 184 (240)
T ss_dssp TCCEEEEEECTTS-----------HHH-HHHHT--------TS-------TTCCSCCCHHHHHHHHHHHT-CEEEEEEEE
T ss_pred CcEEEEEeCCcch-----------hHH-HHHHh--------cC-------ccccccCCHHHHHHHHHHCC-CeEEEEEEe
Confidence 9999998876321 111 11111 11 11245678899999999987 999888877
No 32
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.75 E-value=3.4e-08 Score=87.68 Aligned_cols=155 Identities=10% Similarity=0.026 Sum_probs=87.9
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceeeecc
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFATGV 140 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~~gv 140 (371)
-+|+|+|||+|..+..+. + + | ..+++..|+-..-....=+.+ ... +--|..+.
T Consensus 45 ~~vLdiG~G~G~~~~~l~--------~-~-----------~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d 101 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALA--------K-Q-----------S---DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGD 101 (219)
T ss_dssp EEEEEETCTTSHHHHHHH--------H-H-----------S---EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECB
T ss_pred CEEEEECCCCCHHHHHHH--------H-c-----------C---CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcC
Confidence 399999999999888776 2 1 1 335666666433222111111 111 12233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+..--+|++++|+++++.++||+.. ...+|+.-.+-|+|
T Consensus 102 ---~~~~~~~~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~p 140 (219)
T 3dlc_A 102 ---VHNIPIEDNYADLIVSRGSVFFWED--------------------------------------VATAFREIYRILKS 140 (219)
T ss_dssp ---TTBCSSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEE
T ss_pred ---HHHCCCCcccccEEEECchHhhccC--------------------------------------HHHHHHHHHHhCCC
Confidence 2232368899999999999999622 12367777889999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++...-... ...+.+...+... ..--. ..+.......+.+|+++++++.| |++..+...
T Consensus 141 gG~l~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~~~ 203 (219)
T 3dlc_A 141 GGKTYIGGGFGNK----------ELRDSISAEMIRK---NPDWK---EFNRKNISQENVERFQNVLDEIG-ISSYEIILG 203 (219)
T ss_dssp EEEEEEEECCSSH----------HHHHHHHHHHHHH---CTTHH---HHHHHHSSHHHHHHHHHHHHHHT-CSSEEEEEE
T ss_pred CCEEEEEeccCcH----------HHHHHHHHHHHHh---HHHHH---hhhhhccccCCHHHHHHHHHHcC-CCeEEEEec
Confidence 9999987532221 1222333332221 10000 00111122348899999999987 887665543
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.75 E-value=1.9e-07 Score=83.81 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=55.3
Q ss_pred CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 152 SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 152 ~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
+++|+|++..++|++ |. .|...+|+.-++-|+|||++++.....
T Consensus 100 ~~fD~v~~~~~l~~l---~~---------------------------------~~~~~~l~~~~r~LkpgG~~~l~~~~~ 143 (203)
T 1pjz_A 100 GHCAAFYDRAAMIAL---PA---------------------------------DMRERYVQHLEALMPQACSGLLITLEY 143 (203)
T ss_dssp HSEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHSCSEEEEEEEEESS
T ss_pred CCEEEEEECcchhhC---CH---------------------------------HHHHHHHHHHHHHcCCCcEEEEEEEec
Confidence 789999999999995 32 233457888889999999966555322
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 232 RDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+.. ...-|.|..+.+|+++.+++ | |+++.++...
T Consensus 144 ~~~----------------------------------~~~~~~~~~~~~el~~~~~~-g-f~i~~~~~~~ 177 (203)
T 1pjz_A 144 DQA----------------------------------LLEGPPFSVPQTWLHRVMSG-N-WEVTKVGGQD 177 (203)
T ss_dssp CSS----------------------------------SSSSCCCCCCHHHHHHTSCS-S-EEEEEEEESS
T ss_pred Ccc----------------------------------ccCCCCCCCCHHHHHHHhcC-C-cEEEEecccc
Confidence 110 00113345789999999997 5 9999888764
No 34
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.75 E-value=4.1e-07 Score=86.61 Aligned_cols=160 Identities=11% Similarity=0.149 Sum_probs=89.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+... +. .+|+..|+-..--...=+.+ .. .+--|..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~---------~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 146 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVER---------FD--------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL 146 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---------HC--------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE
T ss_pred CcCEEEEEcccchHHHHHHHHH---------CC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 4569999999999988877632 10 13444444332211111111 10 1112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +..+ | +++|+++|+.++|++.. .|...+|+.-.+-|
T Consensus 147 ~d----~~~~-~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L 184 (318)
T 2fk8_A 147 QG----WEDF-A-EPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIM 184 (318)
T ss_dssp SC----GGGC-C-CCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHS
T ss_pred CC----hHHC-C-CCcCEEEEeChHHhcCH------------------------------------HHHHHHHHHHHHhc
Confidence 32 1222 3 78999999999999532 24455788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcc-cccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVP-MYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++..+...+...... .+.....-...+.+...+ ...| .+.|+.+|+.+.+++.| |+++..
T Consensus 185 kpgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~ 251 (318)
T 2fk8_A 185 PADGRMTVQSSVSYHPYEMAA--RGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEP 251 (318)
T ss_dssp CTTCEEEEEEEECCCHHHHHT--TCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCC
T ss_pred CCCcEEEEEEeccCCchhhhh--ccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEE
Confidence 999999999877654210000 000000000111111111 1123 35679999999999977 998877
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+.+
T Consensus 252 ~~~ 254 (318)
T 2fk8_A 252 LSL 254 (318)
T ss_dssp EEC
T ss_pred Eec
Confidence 765
No 35
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.74 E-value=6.5e-08 Score=86.38 Aligned_cols=157 Identities=15% Similarity=0.128 Sum_probs=90.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++..|+...--... +.. ....+..+.-.
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a-~~~--~~~~~~~~~~~ 104 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALA--------D-R---------------GIEAVGVDGDRTLVDAA-RAA--GAGEVHLASYA 104 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHH--------T-T---------------TCEEEEEESCHHHHHHH-HHT--CSSCEEECCHH
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-C---------------CCEEEEEcCCHHHHHHH-HHh--cccccchhhHH
Confidence 34899999999999887666 2 1 12466666644322111 111 11223333211
Q ss_pred Cccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
.+-... .+.+++|+++++.++|+ .. | ..+|+.-++-|+||
T Consensus 105 ~~~~~~~~~~~~fD~v~~~~~l~~-~~-~-------------------------------------~~~l~~~~~~L~pg 145 (227)
T 3e8s_A 105 QLAEAKVPVGKDYDLICANFALLH-QD-I-------------------------------------IELLSAMRTLLVPG 145 (227)
T ss_dssp HHHTTCSCCCCCEEEEEEESCCCS-SC-C-------------------------------------HHHHHHHHHTEEEE
T ss_pred hhcccccccCCCccEEEECchhhh-hh-H-------------------------------------HHHHHHHHHHhCCC
Confidence 111112 45566999999999992 11 1 23677778899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
|++++........... ..... |....-.+... .-...+.++++.+|+++++++.| |+++.++..
T Consensus 146 G~l~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 209 (227)
T 3e8s_A 146 GALVIQTLHPWSVADG-DYQDG---------WREESFAGFAG----DWQPMPWYFRTLASWLNALDMAG-LRLVSLQEP 209 (227)
T ss_dssp EEEEEEECCTTTTCTT-CCSCE---------EEEECCTTSSS----CCCCEEEEECCHHHHHHHHHHTT-EEEEEEECC
T ss_pred eEEEEEecCccccCcc-ccccc---------cchhhhhcccc----CcccceEEEecHHHHHHHHHHcC-CeEEEEecC
Confidence 9999998766432110 00000 10000001000 00246778899999999999987 999988864
No 36
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.74 E-value=8.6e-08 Score=87.64 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=89.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-Ccceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gv 140 (371)
....+|+|+|||+|..+..+.... . -+++..|.-..--...=+.+.. .+--|..+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-----~------------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~- 147 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-----Y------------------ATTDLLEPVKHMLEEAKRELAGMPVGKFILA- 147 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-----C------------------SEEEEEESCHHHHHHHHHHTTTSSEEEEEES-
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-----c------------------CEEEEEeCCHHHHHHHHHHhccCCceEEEEc-
Confidence 346799999999999988776321 0 0244444332221111111111 11122222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
.+..--+|++++|+++++.++|+++. .|+..+|+.-.+-|+|
T Consensus 148 --d~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lkp 189 (254)
T 1xtp_A 148 --SMETATLPPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALTP 189 (254)
T ss_dssp --CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred --cHHHCCCCCCCeEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCC
Confidence 22222357889999999999999532 2455678888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++.......... . .....+.+.++.+++++++++.| |++++.+..
T Consensus 190 gG~l~i~~~~~~~~~~--------~----------------------~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 190 NGYIFFKENCSTGDRF--------L----------------------VDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp EEEEEEEEEBC--CCE--------E----------------------EETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred CeEEEEEecCCCcccc--------e----------------------ecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 9999998753321100 0 00112345679999999999987 999888765
No 37
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.74 E-value=3.6e-07 Score=84.75 Aligned_cols=168 Identities=10% Similarity=0.046 Sum_probs=94.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcC------chhhhhhcC---CCCc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN------DFNTLFKSV---PLSK 133 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~N------DFn~lF~~l---~~~~ 133 (371)
...+|+|+|||+|..+..+. + ++. | ..+|+.-|+... -....=+.+ ....
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~-~~g---------~---~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLA--------D-QVG---------S---SGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------H-HHC---------T---TCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-HhC---------C---CCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 34699999999999988776 2 221 1 236777777654 112111111 1111
Q ss_pred c-eeeeccCCCcccc--cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHH
Q 017439 134 K-YFATGVPGSFHGR--LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESF 210 (371)
Q Consensus 134 ~-~f~~gvpgSFy~r--LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~F 210 (371)
+ -|..+. .+... -+|++++|+++|+.++|++.... .+
T Consensus 102 ~v~~~~~d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--------------------------------------~~ 141 (275)
T 3bkx_A 102 RLTVHFNT--NLSDDLGPIADQHFDRVVLAHSLWYFASAN--------------------------------------AL 141 (275)
T ss_dssp GEEEECSC--CTTTCCGGGTTCCCSEEEEESCGGGSSCHH--------------------------------------HH
T ss_pred ceEEEECC--hhhhccCCCCCCCEEEEEEccchhhCCCHH--------------------------------------HH
Confidence 2 233332 23222 24689999999999999954311 14
Q ss_pred HHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHH-HHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcC
Q 017439 211 LNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGS-CLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRN 289 (371)
Q Consensus 211 L~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~-al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~ 289 (371)
++....-++|||++++.....+...+. .....+..+.. .+... . .+........++.+++++++++.
T Consensus 142 ~~~~~~l~~~gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~s~~~l~~~l~~a 209 (275)
T 3bkx_A 142 ALLFKNMAAVCDHVDVAEWSMQPTALD---QIGHLQAAMIQGLLYAI-A--------PSDVANIRTLITPDTLAQIAHDN 209 (275)
T ss_dssp HHHHHHHTTTCSEEEEEEECSSCSSGG---GHHHHHHHHHHHHHHHH-S--------CCTTCSCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEecCCCCchh---hhhHHHHHHHHHHHhhc-c--------ccccccccccCCHHHHHHHHHHC
Confidence 455555566799999988766543210 00001111111 11111 0 01122344579999999999998
Q ss_pred CceEEEEEEEeecCc
Q 017439 290 KNFSIEIMNTFTHPL 304 (371)
Q Consensus 290 g~F~I~~~e~~~~p~ 304 (371)
| |++++.+.+..+.
T Consensus 210 G-f~~~~~~~~~~~~ 223 (275)
T 3bkx_A 210 T-WTYTAGTIVEDPT 223 (275)
T ss_dssp T-CEEEECCCBCCTT
T ss_pred C-CeeEEEEEecCCC
Confidence 7 9999988774443
No 38
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.73 E-value=9.3e-08 Score=86.78 Aligned_cols=147 Identities=14% Similarity=0.075 Sum_probs=91.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + ..+++..|+...-....-+.....+--|..+.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--- 106 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLS--------R-T---------------GYKAVGVDISEVMIQKGKERGEGPDLSFIKGD--- 106 (242)
T ss_dssp TCEEEEETCTTSHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHTTTCBTTEEEEECB---
T ss_pred CCeEEEEcCCCCHHHHHHH--------H-c---------------CCeEEEEECCHHHHHHHHhhcccCCceEEEcc---
Confidence 4699999999999888776 2 1 11455666543322222111111222333333
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCce
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGL 223 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 223 (371)
+..--+|++++|+++++.++||+... ..+|+.-++-|+|||+
T Consensus 107 ~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~pgG~ 148 (242)
T 3l8d_A 107 LSSLPFENEQFEAIMAINSLEWTEEP--------------------------------------LRALNEIKRVLKSDGY 148 (242)
T ss_dssp TTBCSSCTTCEEEEEEESCTTSSSCH--------------------------------------HHHHHHHHHHEEEEEE
T ss_pred hhcCCCCCCCccEEEEcChHhhccCH--------------------------------------HHHHHHHHHHhCCCeE
Confidence 22223678999999999999996321 1367777789999999
Q ss_pred EEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 224 LLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 224 lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
+++...+........ . +. .......+....+++++++++++.| |+++..+.+
T Consensus 149 l~i~~~~~~~~~~~~------~-------~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 149 ACIAILGPTAKPREN------S-------YP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp EEEEEECTTCGGGGG------G-------GG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEEEcCCcchhhhh------h-------hh-----------hhccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 999987654321100 0 10 1112233455689999999999987 999888766
No 39
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.72 E-value=5.2e-08 Score=90.95 Aligned_cols=86 Identities=17% Similarity=0.039 Sum_probs=62.7
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
..++|+|+|+.+|||+..-+ .|+...|+.-++-|||||+|++....
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred cCCCCEeeehHHHHHhcCCH----------------------------------HHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 56999999999999954322 35566788888999999999998643
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
..+. +. .|- -.++.+..+.+|+++.+++.| |+++.++..+
T Consensus 200 ~~~~---------~~-------------~g~--------~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 200 RLPS---------YM-------------VGK--------REFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp SCCE---------EE-------------ETT--------EEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred cCcc---------ce-------------eCC--------eEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 2211 00 110 123455679999999999987 9999988764
No 40
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.72 E-value=2.8e-07 Score=84.42 Aligned_cols=148 Identities=16% Similarity=0.076 Sum_probs=86.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~-~~~~f~~ 138 (371)
...+|+|+|||+|..+..+. + ++ ..+++..|+-..--... ++.... .+--|..
T Consensus 36 ~~~~VLDiGcG~G~~~~~la--------~-~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWA--------R-DH--------------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH 92 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H-HT--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hc--------------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 35699999999999888776 2 11 01355555543221111 111111 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++. .+.+++++|+|+|..++|++...+ .+|+.-++-|
T Consensus 93 ~---d~~-~~~~~~~fD~V~~~~~~~~~~~~~--------------------------------------~~l~~~~r~L 130 (256)
T 1nkv_A 93 N---DAA-GYVANEKCDVAACVGATWIAGGFA--------------------------------------GAEELLAQSL 130 (256)
T ss_dssp S---CCT-TCCCSSCEEEEEEESCGGGTSSSH--------------------------------------HHHHHHTTSE
T ss_pred C---ChH-hCCcCCCCCEEEECCChHhcCCHH--------------------------------------HHHHHHHHHc
Confidence 3 333 233478999999999999965322 2577777899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++..+....... ...+...| .. .....+++.+++.+.+++.| |++..++
T Consensus 131 kpgG~l~~~~~~~~~~~~---------~~~~~~~~--------~~-------~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 185 (256)
T 1nkv_A 131 KPGGIMLIGEPYWRQLPA---------TEEIAQAC--------GV-------SSTSDFLTLPGLVGAFDDLG-YDVVEMV 185 (256)
T ss_dssp EEEEEEEEEEEEETTCCS---------SHHHHHTT--------TC-------SCGGGSCCHHHHHHHHHTTT-BCCCEEE
T ss_pred CCCeEEEEecCcccCCCC---------hHHHHHHH--------hc-------ccccccCCHHHHHHHHHHCC-CeeEEEE
Confidence 999999998754432211 01111111 10 11124689999999999987 9877665
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 186 ~~ 187 (256)
T 1nkv_A 186 LA 187 (256)
T ss_dssp EC
T ss_pred eC
Confidence 43
No 41
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.70 E-value=1.2e-07 Score=84.72 Aligned_cols=157 Identities=12% Similarity=0.086 Sum_probs=92.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + + .+++..|....-....-+.+. -+..+.-.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~--------~-~-----------~----~~~~~~D~~~~~~~~~~~~~~----~~~~~d~~ 83 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK--------E-N-----------G----TRVSGIEAFPEAAEQAKEKLD----HVVLGDIE 83 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------T-T-----------T----CEEEEEESSHHHHHHHHTTSS----EEEESCTT
T ss_pred CCCcEEEeCCCCCHHHHHHH--------h-c-----------C----CeEEEEeCCHHHHHHHHHhCC----cEEEcchh
Confidence 45799999999999888766 2 1 1 145666654433222211111 12222211
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+ ..-+|++++|+++++.++|++... ..+|+.-.+-|+|||
T Consensus 84 ~~-~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~~gG 124 (230)
T 3cc8_A 84 TM-DMPYEEEQFDCVIFGDVLEHLFDP--------------------------------------WAVIEKVKPYIKQNG 124 (230)
T ss_dssp TC-CCCSCTTCEEEEEEESCGGGSSCH--------------------------------------HHHHHHTGGGEEEEE
T ss_pred hc-CCCCCCCccCEEEECChhhhcCCH--------------------------------------HHHHHHHHHHcCCCC
Confidence 11 123577899999999999996431 136777778999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++..+.... +..+.. +........+.-..-.....+.+.+|+++++++.| |+++..+.+..
T Consensus 125 ~l~~~~~~~~~------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 187 (230)
T 3cc8_A 125 VILASIPNVSH------------ISVLAP----LLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVYV 187 (230)
T ss_dssp EEEEEEECTTS------------HHHHHH----HHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred EEEEEeCCcch------------HHHHHH----HhcCCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEeccc
Confidence 99998855421 111111 11111110000000012335679999999999987 99999988754
Q ss_pred C
Q 017439 303 P 303 (371)
Q Consensus 303 p 303 (371)
+
T Consensus 188 ~ 188 (230)
T 3cc8_A 188 D 188 (230)
T ss_dssp C
T ss_pred C
Confidence 4
No 42
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.70 E-value=3.4e-07 Score=82.53 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=61.9
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+++++.++||+.. | ..+|+.-.+-|+|||++++..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFVDD-P-------------------------------------ERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCTTCEEEEEEESCGGGSSC-H-------------------------------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEEcchHhhccC-H-------------------------------------HHHHHHHHHHcCCCcEEEEEE
Confidence 46789999999999999632 1 236777778899999999988
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
+...+ .+.. .+..+ ..+ ..+.-...+.+.+|+++++++.| |+++.+...
T Consensus 140 ~~~~~-----------~~~~---~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 140 VDRES-----------FLGR---EYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp ECSSS-----------HHHH---HHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred eCCcc-----------HHHH---HHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 65432 1111 11111 111 12333456789999999999987 998887765
No 43
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.68 E-value=6.5e-07 Score=83.68 Aligned_cols=78 Identities=14% Similarity=0.090 Sum_probs=56.0
Q ss_pred CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 152 SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 152 ~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
+++|+|++..+||+| |. .|...+++.-++-|+|||++++.....
T Consensus 151 ~~FD~V~~~~~l~~l---~~---------------------------------~~~~~~l~~~~~~LkpGG~l~l~~~~~ 194 (252)
T 2gb4_A 151 GKFDRIWDRGALVAI---NP---------------------------------GDHDRYADIILSLLRKEFQYLVAVLSY 194 (252)
T ss_dssp CCEEEEEESSSTTTS---CG---------------------------------GGHHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred CCEEEEEEhhhhhhC---CH---------------------------------HHHHHHHHHHHHHcCCCeEEEEEEEec
Confidence 799999999999996 32 123447788889999999997654332
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 232 RDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+... ..-|.|..+.+|+++.++. + |+|+.++.+.
T Consensus 195 ~~~~----------------------------------~~g~~~~~~~~el~~~l~~-~-f~v~~~~~~~ 228 (252)
T 2gb4_A 195 DPTK----------------------------------HAGPPFYVPSAELKRLFGT-K-CSMQCLEEVD 228 (252)
T ss_dssp CTTS----------------------------------CCCSSCCCCHHHHHHHHTT-T-EEEEEEEEEE
T ss_pred CCcc----------------------------------CCCCCCCCCHHHHHHHhhC-C-eEEEEEeccc
Confidence 1100 0113445789999999987 4 9999998763
No 44
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.68 E-value=1.8e-07 Score=89.72 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=66.9
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+|.|..++||+-..+ |...+|+.-++-|+|||+|++++
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~-----------------------------------~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPR-----------------------------------HYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTT-----------------------------------THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHH-----------------------------------HHHHHHHHHHHHcCCCCEEEEEe
Confidence 5788999999999999954322 12357999999999999999998
Q ss_pred cCcCCCCCCCC------CCCcchHHHHHHHHHHHHHcCCCchh-------hhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 229 PTIRDGIPMFS------TPEGTNFDYLGSCLYDLANMGLIAEE-------KVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 229 ~gr~~~~~~~~------~~~~~~~~~l~~al~~mv~eGli~~e-------~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
+.+........ .+....++. |. .-..++.+ +...-..|-|.-+.+|+++++++.| |+++
T Consensus 170 ~~~~~~~~~~~~~~~~i~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~G-l~lv 241 (302)
T 2vdw_A 170 MDGDKLSKLTDKKTFIIHKNLPSSEN----YM---SVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYG-FVLV 241 (302)
T ss_dssp ECHHHHTTCCSCEEEECCSSSCTTTS----EE---EECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTT-EEEE
T ss_pred CCHHHHHHHHhcCCcccccccccccc----ee---eeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCC-CEEE
Confidence 76532110000 000000000 00 00000000 0112356778888999999999987 9998
Q ss_pred EEEEe
Q 017439 296 IMNTF 300 (371)
Q Consensus 296 ~~e~~ 300 (371)
....+
T Consensus 242 ~~~~f 246 (302)
T 2vdw_A 242 DNVDF 246 (302)
T ss_dssp EEEEH
T ss_pred EecCh
Confidence 88766
No 45
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.68 E-value=2.8e-08 Score=92.29 Aligned_cols=149 Identities=19% Similarity=0.160 Sum_probs=91.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + | ..+|+..|+...- -...+..+ +--|..+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~--------~-------------~---~~~v~gvD~s~~~-~~~a~~~~--~~~~~~~d- 84 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALA--------N-------------Q---GLFVYAVEPSIVM-RQQAVVHP--QVEWFTGY- 84 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------T-------------T---TCEEEEECSCHHH-HHSSCCCT--TEEEECCC-
T ss_pred CCCCEEEEEcCcccHHHHHHH--------h-------------C---CCEEEEEeCCHHH-HHHHHhcc--CCEEEECc-
Confidence 345799999999999888766 2 1 2367777765422 11111111 22344443
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+..--+|++++|+|+|+.++||+.. +..+|+.-.+-|+ |
T Consensus 85 --~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk-g 123 (261)
T 3ege_A 85 --AENLALPDKSVDGVISILAIHHFSH--------------------------------------LEKSFQEMQRIIR-D 123 (261)
T ss_dssp --TTSCCSCTTCBSEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHBC-S
T ss_pred --hhhCCCCCCCEeEEEEcchHhhccC--------------------------------------HHHHHHHHHHHhC-C
Confidence 3332367899999999999999632 2346777788999 9
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++.....+.... .+....+..... ....++++.+++. .+++.| |++...+.++
T Consensus 124 G~~~~~~~~~~~~~~------~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~l~~aG-F~~v~~~~~~ 179 (261)
T 3ege_A 124 GTIVLLTFDIRLAQR------IWLYDYFPFLWE----------------DALRFLPLDEQIN-LLQENT-KRRVEAIPFL 179 (261)
T ss_dssp SCEEEEEECGGGCCC------CGGGGTCHHHHH----------------HHHTSCCHHHHHH-HHHHHH-CSEEEEEECC
T ss_pred cEEEEEEcCCchhHH------HHHHHHHHHHhh----------------hhhhhCCCHHHHH-HHHHcC-CCceeEEEec
Confidence 988888876543211 001111111111 0013477899999 898876 9988888774
Q ss_pred cC
Q 017439 302 HP 303 (371)
Q Consensus 302 ~p 303 (371)
.|
T Consensus 180 ~p 181 (261)
T 3ege_A 180 LP 181 (261)
T ss_dssp EE
T ss_pred CC
Confidence 44
No 46
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.68 E-value=4.3e-08 Score=92.29 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=65.0
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+|+|+.+|||+..-. .|+..+|+.-++-|+|||+|++..
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCCH----------------------------------HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6778999999999999965321 345667888899999999999974
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecC
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHP 303 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p 303 (371)
.-... .+. .| .-..|.++.+.+|+++++++.| |+++.++.++.|
T Consensus 216 ~~~~~-----------~~~-----------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 216 ALEES-----------WYL-----------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp EESCC-----------EEE-----------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred ecCcc-----------eEE-----------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 21110 000 01 1123566789999999999987 999999887644
No 47
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.67 E-value=6.9e-08 Score=86.43 Aligned_cols=143 Identities=12% Similarity=0.013 Sum_probs=92.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..+..+. + .. .| ..+++.-|.-..--...=+.+ ...+-.|..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~--------~-~~---------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 95 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLS--------K-MV---------GE---KGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKS 95 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHH--------H-HH---------TT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCEEEEEecCCCHHHHHHH--------H-Hh---------CC---CcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEec
Confidence 45699999999999998877 2 21 12 346777776543322221111 1112233433
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. +..--+|++++|+++++.++||+.+ ...+|+.-.+-|+
T Consensus 96 d---~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk 134 (219)
T 3dh0_A 96 E---ENKIPLPDNTVDFIFMAFTFHELSE--------------------------------------PLKFLEELKRVAK 134 (219)
T ss_dssp B---TTBCSSCSSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHEE
T ss_pred c---cccCCCCCCCeeEEEeehhhhhcCC--------------------------------------HHHHHHHHHHHhC
Confidence 3 2333368899999999999999632 1236777778999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++........... .-.....+.+|++..+++.| |++.....
T Consensus 135 pgG~l~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 180 (219)
T 3dh0_A 135 PFAYLAIIDWKKEERDKG---------------------------------PPPEEVYSEWEVGLILEDAG-IRVGRVVE 180 (219)
T ss_dssp EEEEEEEEEECSSCCSSS---------------------------------CCGGGSCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CCeEEEEEEecccccccC---------------------------------CchhcccCHHHHHHHHHHCC-CEEEEEEe
Confidence 999999987655432110 00122458999999999987 99888776
Q ss_pred ee
Q 017439 300 FT 301 (371)
Q Consensus 300 ~~ 301 (371)
+.
T Consensus 181 ~~ 182 (219)
T 3dh0_A 181 VG 182 (219)
T ss_dssp ET
T ss_pred eC
Confidence 63
No 48
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.66 E-value=3.6e-07 Score=87.05 Aligned_cols=100 Identities=17% Similarity=0.289 Sum_probs=65.1
Q ss_pred CCCceeEEEecCCcccc-CCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 150 PESSLHVAHTSNALPWL-SKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 150 P~~Svd~~~Ss~alHWL-S~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
|++++|+|+|+.++||+ ... .|...+|+.-++-|+|||++++++
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~-----------------------------------~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESY-----------------------------------EQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSH-----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccCCH-----------------------------------HHHHHHHHHHHHHhCCCcEEEEec
Confidence 35699999999999996 221 344568888889999999999998
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHH--cC-------CCchhhh------------cccCcccccCCHHHHHHHhh
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLAN--MG-------LIAEEKV------------DSFNVPMYYPFLGELMGHIK 287 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~--eG-------li~~e~~------------d~fn~P~Y~ps~eE~~~~i~ 287 (371)
++.+. +.+.|..... -| ..+.+++ ....+|.|..+.+++.++++
T Consensus 156 ~~~~~---------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~ 220 (313)
T 3bgv_A 156 PNSFE---------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAK 220 (313)
T ss_dssp ECHHH---------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGG
T ss_pred CChHH---------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHH
Confidence 76421 1111111000 00 0010011 23457788889999999999
Q ss_pred cCCceEEEEEEEe
Q 017439 288 RNKNFSIEIMNTF 300 (371)
Q Consensus 288 ~~g~F~I~~~e~~ 300 (371)
+.| |+++..+.+
T Consensus 221 ~~G-~~~v~~~~f 232 (313)
T 3bgv_A 221 KYN-MKLVYKKTF 232 (313)
T ss_dssp GGT-EEEEEEEEH
T ss_pred HcC-cEEEEecCH
Confidence 987 999888766
No 49
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.66 E-value=1e-06 Score=83.85 Aligned_cols=149 Identities=9% Similarity=0.094 Sum_probs=89.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC-Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL-SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~-~~~~f~~ 138 (371)
...+|+|+|||+|..++.+... + ..+|+.-|+...--... ++...- .+--|..
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~---------~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 173 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRR---------F--------------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRV 173 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---------H--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHH---------c--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 4579999999999999887732 1 01344444432211111 111110 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +.+--+|++++|+|+++.++||+. +. .+|+.-.+-|
T Consensus 174 ~d---~~~~~~~~~~fD~V~~~~~l~~~~--~~-------------------------------------~~l~~~~~~L 211 (312)
T 3vc1_A 174 CN---MLDTPFDKGAVTASWNNESTMYVD--LH-------------------------------------DLFSEHSRFL 211 (312)
T ss_dssp CC---TTSCCCCTTCEEEEEEESCGGGSC--HH-------------------------------------HHHHHHHHHE
T ss_pred CC---hhcCCCCCCCEeEEEECCchhhCC--HH-------------------------------------HHHHHHHHHc
Confidence 33 222226789999999999999963 21 2677778899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++......+... .....+..+...+ .| ..++.+++++++++.| |+++.++
T Consensus 212 kpgG~l~~~~~~~~~~~~----~~~~~~~~~~~~~------------------~~-~~~s~~~~~~~l~~aG-f~~~~~~ 267 (312)
T 3vc1_A 212 KVGGRYVTITGCWNPRYG----QPSKWVSQINAHF------------------EC-NIHSRREYLRAMADNR-LVPHTIV 267 (312)
T ss_dssp EEEEEEEEEEEEECTTTC----SCCHHHHHHHHHH------------------TC-CCCBHHHHHHHHHTTT-EEEEEEE
T ss_pred CCCcEEEEEEcccccccc----chhHHHHHHHhhh------------------cC-CCCCHHHHHHHHHHCC-CEEEEEE
Confidence 999999998876654321 0011111111110 11 3788999999999987 9999888
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
.+
T Consensus 268 ~~ 269 (312)
T 3vc1_A 268 DL 269 (312)
T ss_dssp EC
T ss_pred eC
Confidence 66
No 50
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.64 E-value=6.4e-07 Score=86.94 Aligned_cols=151 Identities=16% Similarity=0.112 Sum_probs=94.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CCCCc-ceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VPLSK-KYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~~~~-~~f~~g 139 (371)
+...+|+|+|||+|..+..+. + + .| ..+++.-|+|..-- +. +.... .--+.-
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~~~~----~~~~~~~~~~~~v~~ 236 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVL--------R-E----------HP---GLQGVLLDRAEVVA----RHRLDAPDVAGRWKV 236 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHH--------H-H----------CT---TEEEEEEECHHHHT----TCCCCCGGGTTSEEE
T ss_pred cCCceEEEECCccCHHHHHHH--------H-H----------CC---CCEEEEecCHHHhh----cccccccCCCCCeEE
Confidence 456899999999999888777 3 2 33 56788888864211 11 11100 001223
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
+.|+|+ .-+| ++|+++++.+||.+ |+ .+...+|+.-++-|+
T Consensus 237 ~~~d~~-~~~p--~~D~v~~~~vlh~~---~d---------------------------------~~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 237 VEGDFL-REVP--HADVHVLKRILHNW---GD---------------------------------EDSVRILTNCRRVMP 277 (348)
T ss_dssp EECCTT-TCCC--CCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHTCC
T ss_pred EecCCC-CCCC--CCcEEEEehhccCC---CH---------------------------------HHHHHHHHHHHHhcC
Confidence 445666 3456 99999999999962 32 233457888889999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++.-...++... . .+....+ +.-|+..| -..++.+|+++++++.| |+++++..
T Consensus 278 pgG~l~i~e~~~~~~~~-----~--~~~~~~d-~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 278 AHGRVLVIDAVVPEGND-----A--HQSKEMD-FMMLAART-------------GQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp TTCEEEEEECCBCSSSS-----C--CHHHHHH-HHHHHTTS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCEEEEEEeccCCCCC-----c--chhhhcC-hhhhhcCC-------------CcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 99999987655443211 0 1111111 11122211 12578999999999988 99887765
No 51
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.63 E-value=5.1e-07 Score=85.31 Aligned_cols=151 Identities=15% Similarity=0.144 Sum_probs=82.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---C--CCCcceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---V--PLSKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l--~~~~~~f~ 137 (371)
...+|+|+|||+|..+..+.. ++. | ..+|+..|+-..-....=+. . ...+--|.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~---------~~~---------~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~ 94 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQ---------ELK---------P---FEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFK 94 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHH---------HSS---------C---CSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHH---------hCC---------C---CCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEE
Confidence 468999999999999988872 110 1 22455666543322111111 1 01112233
Q ss_pred eccCCCcc---cccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 138 TGVPGSFH---GRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 138 ~gvpgSFy---~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
.+....+- ...++.+++|+|+++.++||+ . | ..+|+.-
T Consensus 95 ~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-~-------------------------------------~~~l~~~ 135 (299)
T 3g5t_A 95 ISSSDDFKFLGADSVDKQKIDMITAVECAHWF-D-F-------------------------------------EKFQRSA 135 (299)
T ss_dssp ECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C-H-------------------------------------HHHHHHH
T ss_pred EcCHHhCCccccccccCCCeeEEeHhhHHHHh-C-H-------------------------------------HHHHHHH
Confidence 33211110 012233899999999999997 2 2 1267777
Q ss_pred HhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccccc-CCHHHHHHHhhcCC
Q 017439 215 AQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYY-PFLGELMGHIKRNK 290 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~-ps~eE~~~~i~~~g 290 (371)
++-|+|||+|++...+.+..... ..+...+.++.... ...-|++. |..+.+++.+++.|
T Consensus 136 ~~~LkpgG~l~i~~~~~~~~~~~---------~~~~~~~~~~~~~~--------~~~~~~w~~p~~~~~~~~l~~~g 195 (299)
T 3g5t_A 136 YANLRKDGTIAIWGYADPIFPDY---------PEFDDLMIEVPYGK--------QGLGPYWEQPGRSRLRNMLKDSH 195 (299)
T ss_dssp HHHEEEEEEEEEEEEEEEECTTC---------GGGTTHHHHHHHCT--------TTTGGGSCTTHHHHHHTTTTTCC
T ss_pred HHhcCCCcEEEEEecCCccccCc---------HHHHHHHHHhccCc--------ccccchhhchhhHHHHHhhhccC
Confidence 78999999999966554321100 01111233222211 02234444 88889999998877
No 52
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.60 E-value=1.7e-07 Score=84.95 Aligned_cols=167 Identities=20% Similarity=0.207 Sum_probs=92.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + + . . +++..|+...--...=+.+...+--|..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~--------~-~----~-----~----~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~--- 96 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAH--------E-H----G-----A----S-YVLGLDLSEKMLARARAAGPDTGITYERA--- 96 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H-T----T-----C----S-EEEEEESCHHHHHHHHHTSCSSSEEEEEC---
T ss_pred CCCEEEEEcCcCCHHHHHHH--------H-C----C-----C----C-eEEEEcCCHHHHHHHHHhcccCCceEEEc---
Confidence 45799999999999887665 2 1 0 1 1 46666664433222222222222223333
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+..-.+|++++|+++++.++||+.. ...+|+.-++-|+|||
T Consensus 97 d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG 138 (243)
T 3bkw_A 97 DLDKLHLPQDSFDLAYSSLALHYVED--------------------------------------VARLFRTVHQALSPGG 138 (243)
T ss_dssp CGGGCCCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEE
T ss_pred ChhhccCCCCCceEEEEeccccccch--------------------------------------HHHHHHHHHHhcCcCc
Confidence 33333367899999999999999632 1236777778999999
Q ss_pred eEEEEecCcCCCCCCCCCC----Ccc-hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 223 LLLLLTPTIRDGIPMFSTP----EGT-NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~----~~~-~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
++++............... .+. .+. +.....++... ..+-.-.+..|.++.+|+++++++.| |+++.+
T Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~ 211 (243)
T 3bkw_A 139 HFVFSTEHPIYMAPARPGWAIDAEGRRTWP-----IDRYLVEGPRK-TDWLAKGVVKHHRTVGTTLNALIRSG-FAIEHV 211 (243)
T ss_dssp EEEEEEECHHHHCCSSCSCEECTTSCEEEE-----ECCTTCCEEEC-TTHHHHSCCEEECCHHHHHHHHHHTT-CEEEEE
T ss_pred EEEEEeCCcccccCcCcceeecCCCceEEe-----eccccccccee-eeeccCceEEEeccHHHHHHHHHHcC-CEeeee
Confidence 9999875321100000000 000 000 00000000000 00000134567789999999999987 999888
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
+..
T Consensus 212 ~~~ 214 (243)
T 3bkw_A 212 EEF 214 (243)
T ss_dssp EEC
T ss_pred ccC
Confidence 754
No 53
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.60 E-value=1.3e-06 Score=84.33 Aligned_cols=151 Identities=15% Similarity=0.132 Sum_probs=93.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh----cCCCCcceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK----SVPLSKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~----~l~~~~~~f~~g 139 (371)
..+|+|+|||+|..+..+. + + .| ..+++.-|+|. .-...+ ..+...+ +.-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~--~~~~a~~~~~~~~~~~~--v~~ 233 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVL--------R-R----------HP---QLTGQIWDLPT--TRDAARKTIHAHDLGGR--VEF 233 (352)
T ss_dssp CCEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEECGG--GHHHHHHHHHHTTCGGG--EEE
T ss_pred CCEEEEeCCCcCHHHHHHH--------H-h----------CC---CCeEEEEECHH--HHHHHHHHHHhcCCCCc--eEE
Confidence 6899999999999888777 3 2 23 45677789864 111111 1111112 222
Q ss_pred cCCCccccc-CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRL-FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rL-fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+.|.|...- ++++++|+++++..||++ |+ ++...+|+.-++-|
T Consensus 234 ~~~d~~~~~~~~~~~~D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~~L 277 (352)
T 3mcz_A 234 FEKNLLDARNFEGGAADVVMLNDCLHYF---DA---------------------------------REAREVIGHAAGLV 277 (352)
T ss_dssp EECCTTCGGGGTTCCEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHTE
T ss_pred EeCCcccCcccCCCCccEEEEecccccC---CH---------------------------------HHHHHHHHHHHHHc
Confidence 334555433 366779999999999974 32 23445788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH-cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN-MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
+|||++++.-...++... ...+..+..... |+. .+ ...++.+|+++++++.| |++++.
T Consensus 278 ~pgG~l~i~e~~~~~~~~------~~~~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~ 336 (352)
T 3mcz_A 278 KPGGALLILTMTMNDDRV------TPALSADFSLHM-MVNTNH-------------GELHPTPWIAGVVRDAG-LAVGER 336 (352)
T ss_dssp EEEEEEEEEEECCCTTSS------SSHHHHHHHHHH-HHHSTT-------------CCCCCHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCEEEEEEeccCCCCC------CCchHHHhhHHH-HhhCCC-------------CCcCCHHHHHHHHHHCC-Cceeee
Confidence 999999987755543311 112222222221 211 11 11578999999999987 998773
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.59 E-value=1.7e-07 Score=85.69 Aligned_cols=144 Identities=15% Similarity=0.073 Sum_probs=89.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC---cceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS---KKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~---~~~f~~g 139 (371)
...+|+|+|||+|..+..+. . +. ..+++..|.-..--...=+.+... +--|..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~--------~-~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 135 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLL--------L-PL--------------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC 135 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTT--------T-TT--------------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hc--------------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc
Confidence 46799999999999888665 2 11 114555565443322222222211 1113332
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+..-.++++++|+++++.++|++.. .++..+|+.-.+-|+
T Consensus 136 ---d~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 136 ---GLQDFTPEPDSYDVIWIQWVIGHLTD------------------------------------QHLAEFLRRCKGSLR 176 (241)
T ss_dssp ---CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEE
T ss_pred ---ChhhcCCCCCCEEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 23333356779999999999999532 123457888888999
Q ss_pred cCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 220 PGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 220 pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
|||++++......+. . .|+ . .-+.+.++.+|+++++++.| |+++..+.
T Consensus 177 pgG~l~i~~~~~~~~-~--------~~~---------------------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 224 (241)
T 2ex4_A 177 PNGIIVIKDNMAQEG-V--------ILD---------------------D-VDSSVCRDLDVVRRIICSAG-LSLLAEER 224 (241)
T ss_dssp EEEEEEEEEEEBSSS-E--------EEE---------------------T-TTTEEEEBHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCeEEEEEEccCCCc-c--------eec---------------------c-cCCcccCCHHHHHHHHHHcC-CeEEEeee
Confidence 999999977554331 0 000 0 01233569999999999987 99988876
Q ss_pred e
Q 017439 300 F 300 (371)
Q Consensus 300 ~ 300 (371)
.
T Consensus 225 ~ 225 (241)
T 2ex4_A 225 Q 225 (241)
T ss_dssp C
T ss_pred c
Confidence 5
No 55
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.56 E-value=1e-06 Score=86.11 Aligned_cols=152 Identities=16% Similarity=0.122 Sum_probs=95.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CCC--Ccceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VPL--SKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~~--~~~~f~~g 139 (371)
..-+|+|+|||+|..++.++ + + .| .+.+..-|+|.- -...+. ++. ..+ +.-
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~--------~-~----------~p---~~~~~~~dlp~v--~~~a~~~~~~~~~~r--v~~ 232 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECM--------S-L----------YP---GCKITVFDIPEV--VWTAKQHFSFQEEEQ--IDF 232 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHH--------H-H----------CS---SCEEEEEECHHH--HHHHHHHSCC--CCS--EEE
T ss_pred cCCeEEeeCCCCCHHHHHHH--------H-h----------CC---CceeEeccCHHH--HHHHHHhhhhcccCc--eee
Confidence 44689999999999887776 3 3 34 567888899852 111111 111 112 334
Q ss_pred cCCCcccccCCCCceeEEEecCCcc-ccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALP-WLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alH-WLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
++|+|+..-+| ..|+++..+.|| | |+ ++-..+|+.-++-|
T Consensus 233 ~~gD~~~~~~~--~~D~~~~~~vlh~~----~d---------------------------------~~~~~iL~~~~~al 273 (353)
T 4a6d_A 233 QEGDFFKDPLP--EADLYILARVLHDW----AD---------------------------------GKCSHLLERIYHTC 273 (353)
T ss_dssp EESCTTTSCCC--CCSEEEEESSGGGS----CH---------------------------------HHHHHHHHHHHHHC
T ss_pred ecCccccCCCC--CceEEEeeeecccC----CH---------------------------------HHHHHHHHHHHhhC
Confidence 56789876444 469999999999 6 43 23344788888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
+|||++++.=.-.++... ...+..+.+ +.-|+.-| --.||.+|+++++++.| |++.++.
T Consensus 274 ~pgg~lli~e~~~~~~~~------~~~~~~~~d-l~ml~~~~-------------g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 274 KPGGGILVIESLLDEDRR------GPLLTQLYS-LNMLVQTE-------------GQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp CTTCEEEEEECCCCTTSC------CCHHHHHHH-HHHHHSSS-------------CCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCCEEEEEEeeeCCCCC------CCHHHHHHH-HHHHHhCC-------------CcCCCHHHHHHHHHHCC-CceEEEE
Confidence 999999887544432211 111222111 12122211 11589999999999988 9988775
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 333 ~~ 334 (353)
T 4a6d_A 333 KT 334 (353)
T ss_dssp CC
T ss_pred Ec
Confidence 43
No 56
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.56 E-value=3.4e-07 Score=86.98 Aligned_cols=165 Identities=9% Similarity=-0.022 Sum_probs=95.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Cc-ceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SK-KYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~-~~f~~ 138 (371)
...+|+|+|||+|..++.+. . . . .| ..+|+.-|+-..--...=+.+.. .. --|..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la--------~-~-~--------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 176 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALD--------Y-S-A--------CP---GVQLVGIDYDPEALDGATRLAAGHALAGQITLHR 176 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSC--------C-T-T--------CT---TCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHH--------H-h-c--------CC---CCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 45789999999999887653 1 0 0 23 34677777654432222222221 11 22333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +.+--+| +++|+++++.++||+... .....||+.-.+-|
T Consensus 177 ~d---~~~~~~~-~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L 217 (305)
T 3ocj_A 177 QD---AWKLDTR-EGYDLLTSNGLNIYEPDD-----------------------------------ARVTELYRRFWQAL 217 (305)
T ss_dssp CC---GGGCCCC-SCEEEEECCSSGGGCCCH-----------------------------------HHHHHHHHHHHHHE
T ss_pred Cc---hhcCCcc-CCeEEEEECChhhhcCCH-----------------------------------HHHHHHHHHHHHhc
Confidence 33 3333345 999999999999984321 12234677888899
Q ss_pred ccCceEEEEecCcCCCCCCCCCCC--cc---hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceE
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPE--GT---NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFS 293 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~--~~---~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~ 293 (371)
+|||++++....++........+. .. ........+.+....+. ..+++.+|+++.+++.| |+
T Consensus 218 kpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~aG-F~ 284 (305)
T 3ocj_A 218 KPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRW------------NALRTHAQTRAQLEEAG-FT 284 (305)
T ss_dssp EEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSC------------CCCCCHHHHHHHHHHTT-CE
T ss_pred CCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhh------------hccCCHHHHHHHHHHCC-CE
Confidence 999999999987754322111100 00 01111112221111111 13579999999999987 99
Q ss_pred EEEEEEe
Q 017439 294 IEIMNTF 300 (371)
Q Consensus 294 I~~~e~~ 300 (371)
+.+++..
T Consensus 285 ~v~~~~~ 291 (305)
T 3ocj_A 285 DLRFEDD 291 (305)
T ss_dssp EEEEECC
T ss_pred EEEEEcc
Confidence 9888754
No 57
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.56 E-value=1.3e-06 Score=85.68 Aligned_cols=151 Identities=15% Similarity=0.154 Sum_probs=93.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCC-CCcceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVP-LSKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~-~~~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| ..+++.-|+|. --... +.... ..+--|.
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-~~~~a~~~~~~~~l~~~v~~~ 257 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVL--------D-A----------FP---GLRGTLLERPP-VAEEARELLTGRGLADRCEIL 257 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-HHHHHHHHHHHTTCTTTEEEE
T ss_pred ccCcEEEEeCCCccHHHHHHH--------H-H----------CC---CCeEEEEcCHH-HHHHHHHhhhhcCcCCceEEe
Confidence 456899999999999877666 3 2 23 45778888843 11111 11111 1112233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.++|. .-+|. ++|++++..+||+. |+ .+...+|+.-++-
T Consensus 258 ---~~d~~-~~~p~-~~D~v~~~~vlh~~---~d---------------------------------~~~~~~L~~~~~~ 296 (369)
T 3gwz_A 258 ---PGDFF-ETIPD-GADVYLIKHVLHDW---DD---------------------------------DDVVRILRRIATA 296 (369)
T ss_dssp ---ECCTT-TCCCS-SCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHTT
T ss_pred ---ccCCC-CCCCC-CceEEEhhhhhccC---CH---------------------------------HHHHHHHHHHHHH
Confidence 35566 34565 89999999999973 32 1223478888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++.-.-.++... .+....+ +.-|+..| -..++.+|+++++++.| |+++++
T Consensus 297 L~pgG~l~i~e~~~~~~~~--------~~~~~~d-~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~ 353 (369)
T 3gwz_A 297 MKPDSRLLVIDNLIDERPA--------ASTLFVD-LLLLVLVG-------------GAERSESEFAALLEKSG-LRVERS 353 (369)
T ss_dssp CCTTCEEEEEEEBCCSSCC--------HHHHHHH-HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEE
T ss_pred cCCCCEEEEEEeccCCCCC--------CchhHhh-HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEE
Confidence 9999999997755543311 1111111 11122222 12578999999999987 999888
Q ss_pred EE
Q 017439 298 NT 299 (371)
Q Consensus 298 e~ 299 (371)
..
T Consensus 354 ~~ 355 (369)
T 3gwz_A 354 LP 355 (369)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 58
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.55 E-value=1.1e-07 Score=94.39 Aligned_cols=145 Identities=14% Similarity=0.206 Sum_probs=90.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CCCCcceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VPLSKKYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~~~~~~f~~gvp 141 (371)
...+|+|+|||+|..+..+. + + ..+++.-|+..+-....-+. ++.....|..+.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~--------~-~---------------g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~- 161 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQ--------E-A---------------GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKAT- 161 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------H-T---------------TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHH-
T ss_pred CCCEEEEecCCCCHHHHHHH--------H-c---------------CCcEEEECCCHHHHHHHHHcCCCcceeeechhh-
Confidence 45799999999999877665 2 1 12566777654432222111 110011121111
Q ss_pred CCcccc-cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGR-LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~r-LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
-.. -+|++++|+++|+.+|||+.+ ...||+.-++-|+|
T Consensus 162 ---~~~l~~~~~~fD~I~~~~vl~h~~d--------------------------------------~~~~l~~~~r~Lkp 200 (416)
T 4e2x_A 162 ---ADDVRRTEGPANVIYAANTLCHIPY--------------------------------------VQSVLEGVDALLAP 200 (416)
T ss_dssp ---HHHHHHHHCCEEEEEEESCGGGCTT--------------------------------------HHHHHHHHHHHEEE
T ss_pred ---HhhcccCCCCEEEEEECChHHhcCC--------------------------------------HHHHHHHHHHHcCC
Confidence 011 146789999999999999642 23478888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhccc-CcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSF-NVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f-n~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||+|++..+...+ +.... .++.+ .-...+++.++++.++++.| |++..++.
T Consensus 201 gG~l~i~~~~~~~----------------------~~~~~-----~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~ 252 (416)
T 4e2x_A 201 DGVFVFEDPYLGD----------------------IVAKT-----SFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQR 252 (416)
T ss_dssp EEEEEEEEECHHH----------------------HHHHT-----CGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CeEEEEEeCChHH----------------------hhhhc-----chhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEE
Confidence 9999998654321 01111 11111 23455789999999999987 99998888
Q ss_pred ee
Q 017439 300 FT 301 (371)
Q Consensus 300 ~~ 301 (371)
++
T Consensus 253 ~~ 254 (416)
T 4e2x_A 253 LP 254 (416)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 59
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.55 E-value=1.2e-06 Score=82.29 Aligned_cols=105 Identities=16% Similarity=0.208 Sum_probs=67.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~~~~~f~~ 138 (371)
.+..+|+|+|||+|..++.+. + .+. + ..+|+..|+...--...=+. .+. +--|..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~-~~~---------~---~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~ 78 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLM--------P-LLP---------E---GSKYTGIDSGETLLAEARELFRLLPY-DSEFLE 78 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHT--------T-TSC---------T---TCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEE
Confidence 456899999999998887765 3 221 1 24677888755432222111 221 223444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +. .+-+++++|++++..++|++... ..+|+.-.+-|
T Consensus 79 ~d---~~-~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L 116 (284)
T 3gu3_A 79 GD---AT-EIELNDKYDIAICHAFLLHMTTP--------------------------------------ETMLQKMIHSV 116 (284)
T ss_dssp SC---TT-TCCCSSCEEEEEEESCGGGCSSH--------------------------------------HHHHHHHHHTE
T ss_pred cc---hh-hcCcCCCeeEEEECChhhcCCCH--------------------------------------HHHHHHHHHHc
Confidence 44 22 33346799999999999995332 23677777899
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||++++..+.
T Consensus 117 kpgG~l~~~~~~ 128 (284)
T 3gu3_A 117 KKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEEEEECC
T ss_pred CCCCEEEEEecc
Confidence 999999998765
No 60
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.54 E-value=7.3e-08 Score=91.19 Aligned_cols=169 Identities=12% Similarity=0.132 Sum_probs=92.7
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC------Ccceeeec
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL------SKKYFATG 139 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~------~~~~f~~g 139 (371)
+|+|+|||+|..+..+... ..+|+..|+-..--...-+.++. .+--|..+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~ 140 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL------------------------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQG 140 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT------------------------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHc------------------------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeC
Confidence 9999999999999887721 01344555533222222111111 11123333
Q ss_pred cCCCcccccCCCCceeEEE-ecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAH-TSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~-Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
. ...+-+++++|+|+ ++.++||++ . .|...+|+.-++-|
T Consensus 141 d----~~~~~~~~~fD~v~~~~~~~~~~~---~---------------------------------~~~~~~l~~~~~~L 180 (299)
T 3g2m_A 141 D----MSAFALDKRFGTVVISSGSINELD---E---------------------------------ADRRGLYASVREHL 180 (299)
T ss_dssp B----TTBCCCSCCEEEEEECHHHHTTSC---H---------------------------------HHHHHHHHHHHHHE
T ss_pred c----hhcCCcCCCcCEEEECCcccccCC---H---------------------------------HHHHHHHHHHHHHc
Confidence 3 12233478899887 568899842 1 34556888888999
Q ss_pred ccCceEEEEecCcCCCCCCCCCCCcchHHHH-HHHHHHHHHcCCC---------------chhhhcccCcccccCCHHHH
Q 017439 219 VPGGLLLLLTPTIRDGIPMFSTPEGTNFDYL-GSCLYDLANMGLI---------------AEEKVDSFNVPMYYPFLGEL 282 (371)
Q Consensus 219 ~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l-~~al~~mv~eGli---------------~~e~~d~fn~P~Y~ps~eE~ 282 (371)
+|||+|++.+...+.......... ..|... ...+ ....... ....+..+....++.+.+|+
T Consensus 181 ~pgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el 257 (299)
T 3g2m_A 181 EPGGKFLLSLAMSEAAESEPLERK-QELPGRSGRRY--VLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQV 257 (299)
T ss_dssp EEEEEEEEEEECCHHHHSCCCCC----------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHH
T ss_pred CCCcEEEEEeecCccccccchhcc-ceeecCCCcEE--EEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHH
Confidence 999999999977643210000000 000000 0000 0000000 00111223445567899999
Q ss_pred HHHhhcCCceEEEEEEEeec
Q 017439 283 MGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 283 ~~~i~~~g~F~I~~~e~~~~ 302 (371)
++++++.| |+++.++.++.
T Consensus 258 ~~ll~~aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 258 VRELVRSG-FDVIAQTPFAS 276 (299)
T ss_dssp HHHHHHTT-CEEEEEEEECT
T ss_pred HHHHHHCC-CEEEEEEecCC
Confidence 99999988 99999988753
No 61
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.54 E-value=5e-06 Score=81.48 Aligned_cols=155 Identities=12% Similarity=0.039 Sum_probs=94.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + + .| ..+++.-|+|. .........+ +.-+.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~ 252 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIV--------A-K----------YP---SINAINFDLPH-----VIQDAPAFSG--VEHLG 252 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-----HHTTCCCCTT--EEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHH--------H-h----------CC---CCEEEEEehHH-----HHHhhhhcCC--CEEEe
Confidence 345799999999999988877 3 2 33 45788888843 2222222122 22345
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
|+|++ -+|+. |+++++++||++ |. ++...+|+.-++-|+||
T Consensus 253 ~d~~~-~~p~~--D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~~L~pg 293 (368)
T 3reo_A 253 GDMFD-GVPKG--DAIFIKWICHDW---SD---------------------------------EHCLKLLKNCYAALPDH 293 (368)
T ss_dssp CCTTT-CCCCC--SEEEEESCGGGB---CH---------------------------------HHHHHHHHHHHHHSCTT
T ss_pred cCCCC-CCCCC--CEEEEechhhcC---CH---------------------------------HHHHHHHHHHHHHcCCC
Confidence 67776 46765 999999999853 32 23445788888999999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++.-.-.++... ...........-+.-|+.- ..-..++.+|+++++++.| |++.++....
T Consensus 294 G~l~i~e~~~~~~~~----~~~~~~~~~~~d~~~~~~~------------~~g~~rt~~e~~~ll~~AG-F~~v~~~~~~ 356 (368)
T 3reo_A 294 GKVIVAEYILPPSPD----PSIATKVVIHTDALMLAYN------------PGGKERTEKEFQALAMASG-FRGFKVASCA 356 (368)
T ss_dssp CEEEEEECCCCSSCC----CCHHHHHHHHHHHHHHHHS------------SBCCCCCHHHHHHHHHHTT-CCEEEEEEEE
T ss_pred CEEEEEEeccCCCCC----CchhhhHHHhhhHHHHhhc------------CCCccCCHHHHHHHHHHCC-CeeeEEEEeC
Confidence 999987654443211 0000000111111122210 0112578999999999988 9988776553
No 62
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.51 E-value=9e-07 Score=84.63 Aligned_cols=155 Identities=15% Similarity=0.076 Sum_probs=93.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-CC----CCccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-VP----LSKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l~----~~~~~f 136 (371)
.+..+|+|+|||+|..+..+. + + .| ..+++..|++ .- -...+. +. ..+--|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~-~~-~~~a~~~~~~~~~~~~v~~ 219 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVA--------Q-H----------NP---NAEIFGVDWA-SV-LEVAKENARIQGVASRYHT 219 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEECH-HH-HHHHHHHHHHHTCGGGEEE
T ss_pred CCCCEEEEECCCcCHHHHHHH--------H-H----------CC---CCeEEEEecH-HH-HHHHHHHHHhcCCCcceEE
Confidence 346799999999998777665 3 2 23 4578888887 32 222222 11 111223
Q ss_pred eeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 137 ~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
.. +.+..--+|. .+|+++++..+|.+ |. .|...+|+.-++
T Consensus 220 ~~---~d~~~~~~~~-~~D~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~ 259 (335)
T 2r3s_A 220 IA---GSAFEVDYGN-DYDLVLLPNFLHHF---DV---------------------------------ATCEQLLRKIKT 259 (335)
T ss_dssp EE---SCTTTSCCCS-CEEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHH
T ss_pred Ee---cccccCCCCC-CCcEEEEcchhccC---CH---------------------------------HHHHHHHHHHHH
Confidence 33 3454433444 49999999999974 31 344557888888
Q ss_pred hcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 217 ELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 217 EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
-|+|||++++.-...++... ...+..+...+ .+...+ ....++.+|+++++++.| |++.+
T Consensus 260 ~L~pgG~l~i~e~~~~~~~~------~~~~~~~~~~~-~~~~~~------------~~~~~t~~~~~~ll~~aG-f~~~~ 319 (335)
T 2r3s_A 260 ALAVEGKVIVFDFIPNSDRI------TPPDAAAFSLV-MLATTP------------NGDAYTFAEYESMFSNAG-FSHSQ 319 (335)
T ss_dssp HEEEEEEEEEEECCCCTTSS------CSHHHHHHHHH-HHHHSS------------SCCCCCHHHHHHHHHHTT-CSEEE
T ss_pred hCCCCcEEEEEeecCCCCcC------CchHHHHHHHH-HHeeCC------------CCCcCCHHHHHHHHHHCC-CCeee
Confidence 99999999988766543211 11222222211 111110 123679999999999987 99887
Q ss_pred EEEe
Q 017439 297 MNTF 300 (371)
Q Consensus 297 ~e~~ 300 (371)
+...
T Consensus 320 ~~~~ 323 (335)
T 2r3s_A 320 LHSL 323 (335)
T ss_dssp EECC
T ss_pred EEEC
Confidence 7654
No 63
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.51 E-value=4.3e-07 Score=83.36 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=61.0
Q ss_pred CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 152 SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 152 ~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
+++|+|+|+.+||++..- ..|...+|+.-++-|+|||+|++.....
T Consensus 156 ~~fD~v~~~~~l~~~~~~----------------------------------~~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPD----------------------------------LPAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp CCEEEEEEESCHHHHCSS----------------------------------HHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred CCccEEEEhhhhhhhcCC----------------------------------hHHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 899999999999974321 1345567888889999999999987432
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeec
Q 017439 232 RDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTH 302 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~ 302 (371)
.+. + ..| ....+.+..+.+++++++++.| |+++.++..+.
T Consensus 202 ~~~-----------~-----------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 241 (265)
T 2i62_A 202 SSY-----------Y-----------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEVISQ 241 (265)
T ss_dssp CCE-----------E-----------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEEECC
T ss_pred Cce-----------E-----------EcC--------CccccccccCHHHHHHHHHHCC-CEEEEEEEecc
Confidence 210 0 001 1122345668999999999987 99999987754
No 64
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.50 E-value=6.2e-07 Score=82.81 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+..+|+|+|||+|..+..+. + + . .+|+..|+-..-....-+.++ +--|..+.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~--------~-~----------~-----~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d-- 101 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLA--------D-S----------F-----GTVEGLELSADMLAIARRRNP--DAVLHHGD-- 101 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHT--------T-T----------S-----SEEEEEESCHHHHHHHHHHCT--TSEEEECC--
T ss_pred CCCcEEEeCCcCCHHHHHHH--------H-c----------C-----CeEEEEECCHHHHHHHHhhCC--CCEEEECC--
Confidence 45799999999999888665 2 1 1 146666764433222222222 22344444
Q ss_pred CcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+ ..+.+++++|+++++. ++||+.. .+|+..+|+.-++-|+||
T Consensus 102 -~-~~~~~~~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pg 144 (263)
T 3pfg_A 102 -M-RDFSLGRRFSAVTCMFSSIGHLAG-----------------------------------QAELDAALERFAAHVLPD 144 (263)
T ss_dssp -T-TTCCCSCCEEEEEECTTGGGGSCH-----------------------------------HHHHHHHHHHHHHTEEEE
T ss_pred -h-HHCCccCCcCEEEEcCchhhhcCC-----------------------------------HHHHHHHHHHHHHhcCCC
Confidence 2 2233378999999998 9999532 145666888889999999
Q ss_pred ceEEEEecCcC
Q 017439 222 GLLLLLTPTIR 232 (371)
Q Consensus 222 G~lvl~~~gr~ 232 (371)
|++++.....+
T Consensus 145 G~l~i~~~~~~ 155 (263)
T 3pfg_A 145 GVVVVEPWWFP 155 (263)
T ss_dssp EEEEECCCCCT
T ss_pred cEEEEEeccCh
Confidence 99999865443
No 65
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.50 E-value=1.8e-06 Score=75.50 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=54.7
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
++++|+++++.++||++ . +|...+|+.-.+-|+|||++++....
T Consensus 95 ~~~~D~v~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLE---A---------------------------------KTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp CCCEEEEEEESCGGGSC---G---------------------------------GGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEEcchhhhCC---H---------------------------------HHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 78899999999999953 1 23455788888999999998876543
Q ss_pred cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 231 IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 231 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
..+..+. + .-..+..+.+|+++.++. |+++..+..
T Consensus 139 ~~~~~~~----------------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~~~ 173 (199)
T 2xvm_A 139 DTADYPC----------------------T----------VGFPFAFKEGELRRYYEG---WERVKYNED 173 (199)
T ss_dssp CCSSSCC----------------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEECC
T ss_pred ccCCcCC----------------------C----------CCCCCccCHHHHHHHhcC---CeEEEeccc
Confidence 3221110 0 001235689999999985 998887644
No 66
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.50 E-value=2.3e-06 Score=82.20 Aligned_cols=150 Identities=18% Similarity=0.168 Sum_probs=91.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC-Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL-SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~-~~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| ..++..-|+|. --... +....- .+--|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-~~~~a~~~~~~~~~~~~v~~- 223 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALL--------T-A----------HE---DLSGTVLDLQG-PASAAHRRFLDTGLSGRAQV- 223 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-HHHHHHHHHHHTTCTTTEEE-
T ss_pred CCCCEEEEeCCChhHHHHHHH--------H-H----------CC---CCeEEEecCHH-HHHHHHHhhhhcCcCcCeEE-
Confidence 456899999999998777666 3 2 22 34566668843 11111 111111 11223
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+.++|+. -+|. ++|++++.++||.. |. .+...+|+.-++-
T Consensus 224 --~~~d~~~-~~p~-~~D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~~ 263 (332)
T 3i53_A 224 --VVGSFFD-PLPA-GAGGYVLSAVLHDW---DD---------------------------------LSAVAILRRCAEA 263 (332)
T ss_dssp --EECCTTS-CCCC-SCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHH
T ss_pred --ecCCCCC-CCCC-CCcEEEEehhhccC---CH---------------------------------HHHHHHHHHHHHh
Confidence 3456663 3465 89999999999963 32 2344578888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
|+|||++++.-.-.++..+ ...+++.. |+..| ...+|.+|+++++++.| |++.++
T Consensus 264 L~pgG~l~i~e~~~~~~~~------~~~~d~~~-----~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~ 318 (332)
T 3i53_A 264 AGSGGVVLVIEAVAGDEHA------GTGMDLRM-----LTYFG-------------GKERSLAELGELAAQAG-LAVRAA 318 (332)
T ss_dssp HTTTCEEEEEECCCC---C------CHHHHHHH-----HHHHS-------------CCCCCHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCCEEEEEeecCCCCCc------cHHHHHHH-----HhhCC-------------CCCCCHHHHHHHHHHCC-CEEEEE
Confidence 9999999997654443211 11222211 22111 12579999999999988 998877
Q ss_pred EEe
Q 017439 298 NTF 300 (371)
Q Consensus 298 e~~ 300 (371)
...
T Consensus 319 ~~~ 321 (332)
T 3i53_A 319 HPI 321 (332)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 67
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.49 E-value=6.7e-06 Score=80.54 Aligned_cols=153 Identities=13% Similarity=0.076 Sum_probs=95.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + .| ..+++.-|+|. .........+ +.-+.|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~ 251 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIA--------A-H----------YP---TIKGVNFDLPH-----VISEAPQFPG--VTHVGG 251 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH-----HHTTCCCCTT--EEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-H----------CC---CCeEEEecCHH-----HHHhhhhcCC--eEEEeC
Confidence 45899999999999888777 3 2 33 45788888853 2222222122 233456
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+|++ =+|+. |+++++++||.+ |. +|...+|+.-++-|+|||
T Consensus 252 D~~~-~~p~~--D~v~~~~vlh~~---~d---------------------------------~~~~~~L~~~~~~L~pgG 292 (364)
T 3p9c_A 252 DMFK-EVPSG--DTILMKWILHDW---SD---------------------------------QHCATLLKNCYDALPAHG 292 (364)
T ss_dssp CTTT-CCCCC--SEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHSCTTC
T ss_pred CcCC-CCCCC--CEEEehHHhccC---CH---------------------------------HHHHHHHHHHHHHcCCCC
Confidence 7777 46765 999999999842 32 344557888889999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHH-HHHHHHHHHHH-cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFD-YLGSCLYDLAN-MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~-~l~~al~~mv~-eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
++++.=.-.++... ....+. ....-+.-|+. .| -..++.+|+++++++.| |++.++...
T Consensus 293 ~l~i~e~~~~~~~~-----~~~~~~~~~~~d~~m~~~~~~-------------g~~rt~~e~~~ll~~AG-F~~v~~~~~ 353 (364)
T 3p9c_A 293 KVVLVQCILPVNPE-----ANPSSQGVFHVDMIMLAHNPG-------------GRERYEREFQALARGAG-FTGVKSTYI 353 (364)
T ss_dssp EEEEEECCBCSSCC-----SSHHHHHHHHHHHHHHHHCSS-------------CCCCBHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEEEEEeccCCCCC-----cchhhhhHHHhHHHHHhcccC-------------CccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 99987655443211 011111 11111222211 11 12578999999999988 998887765
Q ss_pred ec
Q 017439 301 TH 302 (371)
Q Consensus 301 ~~ 302 (371)
..
T Consensus 354 ~~ 355 (364)
T 3p9c_A 354 YA 355 (364)
T ss_dssp ET
T ss_pred CC
Confidence 43
No 68
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.49 E-value=2.2e-06 Score=80.88 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=60.2
Q ss_pred cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEE
Q 017439 148 LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 148 LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
.+|.+++|+++++.+|||+..- |...+|+.-++-|+|||+|++.
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~------------------------------------~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD------------------------------------VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT------------------------------------THHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCCCCCEEEEEechhhhCCcH------------------------------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 3565689999999999996542 2234677778899999999999
Q ss_pred ecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 228 TPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 228 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
....+. + ..+..+...+. . ...|+++++.+|+++.+. | |++......
T Consensus 196 ~~~~~~--~-------~~~~~~~~~~~---~-----------~~~~~~~~s~~ei~~~l~--G-~~l~~~g~~ 242 (274)
T 2qe6_A 196 SLVDTG--L-------PAQQKLARITR---E-----------NLGEGWARTPEEIERQFG--D-FELVEPGVV 242 (274)
T ss_dssp EEBCSS--C-------HHHHHHHHHHH---H-----------HHSCCCCBCHHHHHHTTT--T-CEECTTCSE
T ss_pred EecCcc--h-------HHHHHHHHHHH---h-----------cCCCCccCCHHHHHHHhC--C-CeEccCcEe
Confidence 976532 1 01122222221 1 112677899999999993 4 887664433
No 69
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.48 E-value=1.2e-06 Score=75.23 Aligned_cols=133 Identities=11% Similarity=0.065 Sum_probs=86.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVP 141 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvp 141 (371)
....+|+|+|||+|..+..+. + +. . +++.-|+...-....-+..+ +-.|..+.
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~--------~-~~--------------~-~v~~vD~s~~~~~~a~~~~~--~v~~~~~d- 68 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLL--------E-FA--------------T-KLYCIDINVIALKEVKEKFD--SVITLSDP- 68 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHH--------T-TE--------------E-EEEEECSCHHHHHHHHHHCT--TSEEESSG-
T ss_pred CCCCeEEEECCCCCHHHHHHH--------h-hc--------------C-eEEEEeCCHHHHHHHHHhCC--CcEEEeCC-
Confidence 345799999999999988776 2 11 2 56666664433222222211 12233332
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
.-+|++++|+++++.++||+.. ...+|+.-.+-|+||
T Consensus 69 -----~~~~~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pg 105 (170)
T 3i9f_A 69 -----KEIPDNSVDFILFANSFHDMDD--------------------------------------KQHVISEVKRILKDD 105 (170)
T ss_dssp -----GGSCTTCEEEEEEESCSTTCSC--------------------------------------HHHHHHHHHHHEEEE
T ss_pred -----CCCCCCceEEEEEccchhcccC--------------------------------------HHHHHHHHHHhcCCC
Confidence 2357899999999999999632 123677777899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
|++++......+.... . ......+.+|+++.++ | |++......
T Consensus 106 G~l~~~~~~~~~~~~~----~-----------------------------~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 106 GRVIIIDWRKENTGIG----P-----------------------------PLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp EEEEEEEECSSCCSSS----S-----------------------------CGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred CEEEEEEcCccccccC----c-----------------------------hHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 9999997665443110 0 0012368999999999 5 998887765
No 70
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.47 E-value=8.1e-07 Score=87.58 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=69.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-----------CCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-----------VPL 131 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-----------l~~ 131 (371)
...+|+|+|||+|..++.+. + .+. | ..+|+..|+-..--...=+. +..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la--------~-~~~---------~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~ 141 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLAS--------K-LVG---------E---HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSR 141 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------H-HHT---------T---TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTC
T ss_pred CCCEEEEecCccCHHHHHHH--------H-HhC---------C---CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCC
Confidence 45799999999999988776 2 221 1 23567777644322211111 111
Q ss_pred CcceeeeccCCCcccc---cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH
Q 017439 132 SKKYFATGVPGSFHGR---LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE 208 (371)
Q Consensus 132 ~~~~f~~gvpgSFy~r---LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~ 208 (371)
.+--|..+.--.+-.. -+|++++|+|+|+.++||+.+ +.
T Consensus 142 ~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~ 183 (383)
T 4fsd_A 142 SNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTN--------------------------------------KL 183 (383)
T ss_dssp CCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC--------------------------------------HH
T ss_pred CceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCC--------------------------------------HH
Confidence 2223444432111111 468899999999999999543 12
Q ss_pred HHHHHHHhhcccCceEEEEecCcC
Q 017439 209 SFLNARAQELVPGGLLLLLTPTIR 232 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~gr~ 232 (371)
.+|+.-.+-|+|||+|++.....+
T Consensus 184 ~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 184 ALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEEeccc
Confidence 367777889999999999876554
No 71
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.47 E-value=5.1e-07 Score=81.62 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=65.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gv 140 (371)
...+|+|+|||+|..+..+. + + ..+++..|...+-....=+.++.. +--|..+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~--------~-~---------------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~- 91 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLC--------P-K---------------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ- 91 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHG--------G-G---------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC-
T ss_pred CCCeEEEeCCCCCHHHHHHH--------H-C---------------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEec-
Confidence 45799999999999988776 2 1 113555565443322221111100 1122222
Q ss_pred CCCcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 141 PGSFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+..-.+| +++|+++++. ++||+.. ..|...+|+.-++-|+
T Consensus 92 --d~~~~~~~-~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~ 133 (246)
T 1y8c_A 92 --DISNLNIN-RKFDLITCCLDSTNYIID-----------------------------------SDDLKKYFKAVSNHLK 133 (246)
T ss_dssp --CGGGCCCS-CCEEEEEECTTGGGGCCS-----------------------------------HHHHHHHHHHHHTTEE
T ss_pred --ccccCCcc-CCceEEEEcCccccccCC-----------------------------------HHHHHHHHHHHHHhcC
Confidence 22222234 8899999998 9999532 1345668888899999
Q ss_pred cCceEEEEecCc
Q 017439 220 PGGLLLLLTPTI 231 (371)
Q Consensus 220 pGG~lvl~~~gr 231 (371)
|||++++.+...
T Consensus 134 pgG~l~~~~~~~ 145 (246)
T 1y8c_A 134 EGGVFIFDINSY 145 (246)
T ss_dssp EEEEEEEEEECH
T ss_pred CCcEEEEEecCH
Confidence 999999987653
No 72
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.46 E-value=1.2e-05 Score=76.94 Aligned_cols=150 Identities=14% Similarity=0.163 Sum_probs=92.3
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---CcceeeeccC
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFATGVP 141 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~gvp 141 (371)
.+|+|+|||+|..+..+. + + .| ..+++..|+ ..--...=+.+.. ..+ +.-+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~-~~~~~~a~~~~~~~~~~~~--v~~~~ 223 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL--------Q-A----------EP---SARGVMLDR-EGSLGVARDNLSSLLAGER--VSLVG 223 (334)
T ss_dssp CEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEEC-TTCTHHHHHHTHHHHHTTS--EEEEE
T ss_pred CEEEEeCCCchHHHHHHH--------H-H----------CC---CCEEEEeCc-HHHHHHHHHHHhhcCCCCc--EEEec
Confidence 899999999998877666 3 2 23 457889998 3332222122211 111 22234
Q ss_pred CCcccccCCCCceeEEEecCCcc-ccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 142 GSFHGRLFPESSLHVAHTSNALP-WLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alH-WLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
|.|.+. +| +++|++++...+| | |. .+...+|+.-++-|+|
T Consensus 224 ~d~~~~-~~-~~~D~v~~~~vl~~~----~~---------------------------------~~~~~~l~~~~~~L~p 264 (334)
T 2ip2_A 224 GDMLQE-VP-SNGDIYLLSRIIGDL----DE---------------------------------AASLRLLGNCREAMAG 264 (334)
T ss_dssp SCTTTC-CC-SSCSEEEEESCGGGC----CH---------------------------------HHHHHHHHHHHHHSCT
T ss_pred CCCCCC-CC-CCCCEEEEchhccCC----CH---------------------------------HHHHHHHHHHHHhcCC
Confidence 566663 55 7899999999998 6 32 2234578888889999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
||++++.-...++... ..+..+.+. .-|...+ -..++.+|+++++++.| |++.++...
T Consensus 265 gG~l~i~e~~~~~~~~-------~~~~~~~~~-~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 322 (334)
T 2ip2_A 265 DGRVVVIERTISASEP-------SPMSVLWDV-HLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERIVDL 322 (334)
T ss_dssp TCEEEEEECCBCSSSC-------CHHHHHHHH-HHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCEEEEEEeccCCCCC-------cchhHHhhh-HhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEEEEC
Confidence 9999998765543211 011111111 1111111 12468999999999987 998877654
No 73
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.43 E-value=8.9e-07 Score=78.25 Aligned_cols=142 Identities=17% Similarity=0.086 Sum_probs=88.0
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--CcceeeeccCCC
Q 017439 66 KIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGVPGS 143 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gvpgS 143 (371)
+|+|+|||+|..+..+. + . ..+++..|....--...-+.+.. .+--|..+ .
T Consensus 32 ~vLdiGcG~G~~~~~l~--------~--~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d 84 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLA--------S--L--------------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQS---N 84 (202)
T ss_dssp EEEECCCSCTHHHHHHH--------T--T--------------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECC---B
T ss_pred CEEEECCCCCHhHHHHH--------h--C--------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEc---C
Confidence 99999999999987766 2 0 11455666543322221111110 01122222 2
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCce
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGL 223 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~ 223 (371)
+..--+|++++|+++++. .|| +. .|...+|+.-.+-|+|||+
T Consensus 85 ~~~~~~~~~~fD~v~~~~-~~~----~~---------------------------------~~~~~~l~~~~~~L~pgG~ 126 (202)
T 2kw5_A 85 LADFDIVADAWEGIVSIF-CHL----PS---------------------------------SLRQQLYPKVYQGLKPGGV 126 (202)
T ss_dssp TTTBSCCTTTCSEEEEEC-CCC----CH---------------------------------HHHHHHHHHHHTTCCSSEE
T ss_pred hhhcCCCcCCccEEEEEh-hcC----CH---------------------------------HHHHHHHHHHHHhcCCCcE
Confidence 222235788999999964 455 21 3455678888899999999
Q ss_pred EEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEeecC
Q 017439 224 LLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFTHP 303 (371)
Q Consensus 224 lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~~p 303 (371)
+++......+... ..| ...-+.++.+.+|+++.++ | |+++.++..+.+
T Consensus 127 l~~~~~~~~~~~~---------------------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~ 174 (202)
T 2kw5_A 127 FILEGFAPEQLQY---------------------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNLERN 174 (202)
T ss_dssp EEEEEECTTTGGG---------------------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEE
T ss_pred EEEEEeccccccC---------------------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEEEee
Confidence 9999877543210 001 1123567899999999999 5 999999887554
Q ss_pred c
Q 017439 304 L 304 (371)
Q Consensus 304 ~ 304 (371)
.
T Consensus 175 ~ 175 (202)
T 2kw5_A 175 L 175 (202)
T ss_dssp C
T ss_pred c
Confidence 3
No 74
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.42 E-value=1.3e-06 Score=78.04 Aligned_cols=107 Identities=12% Similarity=0.127 Sum_probs=70.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC-cceeeecc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS-KKYFATGV 140 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~-~~~f~~gv 140 (371)
....+|+|+|||+|..+..+. + + -.+++..|.-..-....-+.+... +--|..+.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d 105 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLA--------P-H---------------CKRLTVIDVMPRAIGRACQRTKRWSHISWAATD 105 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHG--------G-G---------------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECC
T ss_pred CCCCcEEEEcCCCCHHHHHHH--------H-c---------------CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcc
Confidence 456899999999999888765 2 1 124556665443333332223221 12344443
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
...+.|++++|+++++.++||+... .++..+|+.-++-|+|
T Consensus 106 ----~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~p 146 (216)
T 3ofk_A 106 ----ILQFSTAELFDLIVVAEVLYYLEDM-----------------------------------TQMRTAIDNMVKMLAP 146 (216)
T ss_dssp ----TTTCCCSCCEEEEEEESCGGGSSSH-----------------------------------HHHHHHHHHHHHTEEE
T ss_pred ----hhhCCCCCCccEEEEccHHHhCCCH-----------------------------------HHHHHHHHHHHHHcCC
Confidence 2333478999999999999996541 2344578888899999
Q ss_pred CceEEEEecCc
Q 017439 221 GGLLLLLTPTI 231 (371)
Q Consensus 221 GG~lvl~~~gr 231 (371)
||++++.....
T Consensus 147 gG~l~~~~~~~ 157 (216)
T 3ofk_A 147 GGHLVFGSARD 157 (216)
T ss_dssp EEEEEEEEECH
T ss_pred CCEEEEEecCC
Confidence 99999987543
No 75
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.41 E-value=2.7e-06 Score=73.78 Aligned_cols=118 Identities=16% Similarity=0.115 Sum_probs=77.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
..-+|+|+||+... +-+-...++..++ +... .+++...|...-+|
T Consensus 12 ~g~~vL~~~~g~v~--vD~s~~ml~~a~~-~~~~------------~~~~~~~d~~~~~~-------------------- 56 (176)
T 2ld4_A 12 AGQFVAVVWDKSSP--VEALKGLVDKLQA-LTGN------------EGRVSVENIKQLLQ-------------------- 56 (176)
T ss_dssp TTSEEEEEECTTSC--HHHHHHHHHHHHH-HTTT------------TSEEEEEEGGGGGG--------------------
T ss_pred CCCEEEEecCCcee--eeCCHHHHHHHHH-hccc------------CcEEEEechhcCcc--------------------
Confidence 35789999998753 5555666666666 4321 23444444321110
Q ss_pred CcccccCCCCceeEEEecCCcccc-CCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWL-SKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWL-S~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+-+|++++|+++|+.++||+ ... ..+|+.-++-|+||
T Consensus 57 ----~~~~~~~fD~V~~~~~l~~~~~~~--------------------------------------~~~l~~~~r~Lkpg 94 (176)
T 2ld4_A 57 ----SAHKESSFDIILSGLVPGSTTLHS--------------------------------------AEILAEIARILRPG 94 (176)
T ss_dssp ----GCCCSSCEEEEEECCSTTCCCCCC--------------------------------------HHHHHHHHHHEEEE
T ss_pred ----ccCCCCCEeEEEECChhhhcccCH--------------------------------------HHHHHHHHHHCCCC
Confidence 01378899999999999997 221 22677778899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|++++..+.... . + -+.|.++.+|+.+.+++.| | |+
T Consensus 95 G~l~~~~~~~~~--------~-----------------~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 95 GCLFLKEPVETA--------V-----------------D-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEEEEEEESS--------S-----------------C-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred EEEEEEcccccc--------c-----------------c-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 999995321110 0 0 0666788999999999987 8 76
No 76
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.40 E-value=2.5e-06 Score=77.76 Aligned_cols=94 Identities=12% Similarity=-0.092 Sum_probs=56.9
Q ss_pred ceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEecCcC
Q 017439 153 SLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTPTIR 232 (371)
Q Consensus 153 Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr~ 232 (371)
++|+++++.++||+ |. .|...+|+.-.+-|+|||++++.-.+..
T Consensus 124 ~~d~v~~~~~~~~~---~~---------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 124 GDANIYMRTGFHHI---PV---------------------------------EKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp CSCEEEEESSSTTS---CG---------------------------------GGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred CccEEEEcchhhcC---CH---------------------------------HHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 48999999999995 32 3445578888899999999888876654
Q ss_pred CCCCCCCCCCcchHHHHHHHHHHHHHcCCCchh---hhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 233 DGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEE---KVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e---~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
+.. .+..+... ..| .... .+..-..|. ..+.+|+++.+ .| |++......+
T Consensus 168 ~~~---------~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~--aG-f~~~~~~~~~ 220 (245)
T 3ggd_A 168 CID---------FFNSLLEK-----YGQ-LPYELLLVMEHGIRPG-IFTAEDIELYF--PD-FEILSQGEGL 220 (245)
T ss_dssp HHH---------HHHHHHHH-----HSS-CCHHHHHHHTTTCCCC-CCCHHHHHHHC--TT-EEEEEEECCB
T ss_pred ccH---------HHHHHHhC-----CCC-CchhhhhccccCCCCC-ccCHHHHHHHh--CC-CEEEeccccc
Confidence 320 11111110 011 1110 011112233 46899999999 44 9998777654
No 77
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.38 E-value=5e-06 Score=74.44 Aligned_cols=151 Identities=13% Similarity=0.064 Sum_probs=87.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--------cce
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--------KKY 135 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--------~~~ 135 (371)
..+|+|+|||+|..+..+. + + .| ..+++..|+...--...=+.+... +--
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~-~----------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLL--------K-D----------KS---FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRIS 87 (219)
T ss_dssp CCEEEEETCTTCHHHHHHH--------T-S----------TT---CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEE
T ss_pred CCEEEEecCCCCHHHHHHH--------h-c----------CC---CCEEEEEECCHHHHHHHHHHHHhhccccccCcceE
Confidence 4699999999999888776 2 1 12 246777776554333322222210 122
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
|..+. +...-++++++|+|+++.++||+ |. .++..+|+.-+
T Consensus 88 ~~~~d---~~~~~~~~~~fD~V~~~~~l~~~---~~---------------------------------~~~~~~l~~~~ 128 (219)
T 3jwg_A 88 LFQSS---LVYRDKRFSGYDAATVIEVIEHL---DE---------------------------------NRLQAFEKVLF 128 (219)
T ss_dssp EEECC---SSSCCGGGTTCSEEEEESCGGGC---CH---------------------------------HHHHHHHHHHH
T ss_pred EEeCc---ccccccccCCCCEEEEHHHHHhC---CH---------------------------------HHHHHHHHHHH
Confidence 33332 22333467899999999999996 32 24456888888
Q ss_pred hhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHH----HHhhcCCc
Q 017439 216 QELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELM----GHIKRNKN 291 (371)
Q Consensus 216 ~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~----~~i~~~g~ 291 (371)
+-|+|||.++.+.....+... .. +. .+... ..-..+..+.+|++ .++++.|
T Consensus 129 ~~LkpgG~~i~~~~~~~~~~~-~~-------------~~----~~~~~------~~~~~~~~~~~~l~~~~~~l~~~~G- 183 (219)
T 3jwg_A 129 EFTRPQTVIVSTPNKEYNFHY-GN-------------LF----EGNLR------HRDHRFEWTRKEFQTWAVKVAEKYG- 183 (219)
T ss_dssp TTTCCSEEEEEEEBGGGGGCC-CC-------------T---------G------GGCCTTSBCHHHHHHHHHHHHHHHT-
T ss_pred HhhCCCEEEEEccchhhhhhh-cc-------------cC----ccccc------ccCceeeecHHHHHHHHHHHHHHCC-
Confidence 999999966555432221110 00 00 00000 11123456899999 6677766
Q ss_pred eEEEEEEEe
Q 017439 292 FSIEIMNTF 300 (371)
Q Consensus 292 F~I~~~e~~ 300 (371)
|+++....-
T Consensus 184 f~v~~~~~g 192 (219)
T 3jwg_A 184 YSVRFLQIG 192 (219)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEecC
Confidence 988776543
No 78
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.37 E-value=5.9e-06 Score=78.59 Aligned_cols=159 Identities=16% Similarity=0.178 Sum_probs=88.3
Q ss_pred CCceEEeeecCCC--CcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchh---hhhhcCCCCccee
Q 017439 62 SSTFKIADLGCST--GPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFN---TLFKSVPLSKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~--G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn---~lF~~l~~~~~~f 136 (371)
...-+|+|+|||. |.|+..+.+.+ .| .-+|+..|.-..--. .++...+..+--|
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~------------------~P---~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~ 135 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSV------------------AP---ESRVVYVDNDPIVLTLSQGLLASTPEGRTAY 135 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHH------------------CT---TCEEEEEECCHHHHHTTHHHHCCCSSSEEEE
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHH------------------CC---CCEEEEEeCChHHHHHHHHHhccCCCCcEEE
Confidence 3567999999998 77887766321 12 335566555322111 1111111112235
Q ss_pred eeccCCCcccccC-C--CCcee-----EEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH
Q 017439 137 ATGVPGSFHGRLF-P--ESSLH-----VAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE 208 (371)
Q Consensus 137 ~~gvpgSFy~rLf-P--~~Svd-----~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~ 208 (371)
+.+.-...-.-|- | .+++| .++|+.+||||..- +|..
T Consensus 136 v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~-----------------------------------~~p~ 180 (277)
T 3giw_A 136 VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDE-----------------------------------DDAV 180 (277)
T ss_dssp EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGG-----------------------------------GCHH
T ss_pred EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCch-----------------------------------hhHH
Confidence 5554222210000 1 23444 58899999996441 1223
Q ss_pred HHHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhc
Q 017439 209 SFLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKR 288 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~ 288 (371)
..|+.-.+-|+|||+|++...+.+.. + ...+.+.+.++ .. ..|+.++|.+|+.+.+.
T Consensus 181 ~~l~~l~~~L~PGG~Lvls~~~~d~~-p-------~~~~~~~~~~~---~~-----------g~p~~~rs~~ei~~~f~- 237 (277)
T 3giw_A 181 GIVRRLLEPLPSGSYLAMSIGTAEFA-P-------QEVGRVAREYA---AR-----------NMPMRLRTHAEAEEFFE- 237 (277)
T ss_dssp HHHHHHHTTSCTTCEEEEEEECCTTS-H-------HHHHHHHHHHH---HT-----------TCCCCCCCHHHHHHTTT-
T ss_pred HHHHHHHHhCCCCcEEEEEeccCCCC-H-------HHHHHHHHHHH---hc-----------CCCCccCCHHHHHHHhC-
Confidence 35666778999999999999876521 1 01122222222 22 23788999999999995
Q ss_pred CCceEEEEEEEee
Q 017439 289 NKNFSIEIMNTFT 301 (371)
Q Consensus 289 ~g~F~I~~~e~~~ 301 (371)
+|++..--..+
T Consensus 238 --GlelvePG~v~ 248 (277)
T 3giw_A 238 --GLELVEPGIVQ 248 (277)
T ss_dssp --TSEECTTCSEE
T ss_pred --CCcccCCcEee
Confidence 49876554443
No 79
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.36 E-value=1.8e-06 Score=74.84 Aligned_cols=129 Identities=16% Similarity=0.153 Sum_probs=81.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + . ..+++..|.-..-....=+.++. --+..+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~--------~-~---------------~~~v~~~D~~~~~~~~a~~~~~~--~~~~~~--- 96 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLS--------K-Q---------------GHDVLGTDLDPILIDYAKQDFPE--ARWVVG--- 96 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHHHCTT--SEEEEC---
T ss_pred CCCeEEEECCCCCHHHHHHH--------H-C---------------CCcEEEEcCCHHHHHHHHHhCCC--CcEEEc---
Confidence 34699999999999888766 2 1 01355555443322222122211 122222
Q ss_pred CcccccCCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
.+..--+|++++|+++++ ..+|+++. .+...+|+.-.+-|+||
T Consensus 97 d~~~~~~~~~~~D~i~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~l~~~ 140 (195)
T 3cgg_A 97 DLSVDQISETDFDLIVSAGNVMGFLAE------------------------------------DGREPALANIHRALGAD 140 (195)
T ss_dssp CTTTSCCCCCCEEEEEECCCCGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred ccccCCCCCCceeEEEECCcHHhhcCh------------------------------------HHHHHHHHHHHHHhCCC
Confidence 222223577899999998 77887421 23455788888999999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
|++++.+.... ..+.+++...+++.| |+++.....
T Consensus 141 G~l~~~~~~~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~~ 175 (195)
T 3cgg_A 141 GRAVIGFGAGR-------------------------------------------GWVFGDFLEVAERVG-LELENAFES 175 (195)
T ss_dssp EEEEEEEETTS-------------------------------------------SCCHHHHHHHHHHHT-EEEEEEESS
T ss_pred CEEEEEeCCCC-------------------------------------------CcCHHHHHHHHHHcC-CEEeeeecc
Confidence 99999764321 146788888888876 888777543
No 80
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.36 E-value=2.8e-06 Score=82.60 Aligned_cols=156 Identities=21% Similarity=0.201 Sum_probs=91.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~ 137 (371)
....+|+|+|||+|..+..+. + + .| ..+++..|+ ..--...=+.+ ... +--|.
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~--------~-~----------~~---~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~ 237 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIA--------L-R----------AP---HLRGTLVEL-AGPAERARRRFADAGLADRVTVA 237 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHH--------H-H----------CC---CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEE
Confidence 346799999999998877766 3 2 22 457888888 32211111111 111 22233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+.|.+ -+|.+ +|+++++..+|++ |. .+...+|+.-.+-
T Consensus 238 ---~~d~~~-~~~~~-~D~v~~~~vl~~~---~~---------------------------------~~~~~~l~~~~~~ 276 (374)
T 1qzz_A 238 ---EGDFFK-PLPVT-ADVVLLSFVLLNW---SD---------------------------------EDALTILRGCVRA 276 (374)
T ss_dssp ---ECCTTS-CCSCC-EEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHH
T ss_pred ---eCCCCC-cCCCC-CCEEEEeccccCC---CH---------------------------------HHHHHHHHHHHHh
Confidence 345555 34554 9999999999863 32 2223577888899
Q ss_pred cccCceEEEEec--CcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEE
Q 017439 218 LVPGGLLLLLTP--TIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIE 295 (371)
Q Consensus 218 L~pGG~lvl~~~--gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~ 295 (371)
|+|||++++.-. ..++.. ...+..+...+. ++..| ...++.+|+++++++.| |++.
T Consensus 277 L~pgG~l~i~e~~~~~~~~~-------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~ 334 (374)
T 1qzz_A 277 LEPGGRLLVLDRADVEGDGA-------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALA 334 (374)
T ss_dssp EEEEEEEEEEECCH--------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEE
T ss_pred cCCCcEEEEEechhhcCCCC-------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceE
Confidence 999999998766 332211 011222211111 11111 13589999999999987 9998
Q ss_pred EEEEeecC
Q 017439 296 IMNTFTHP 303 (371)
Q Consensus 296 ~~e~~~~p 303 (371)
++.....+
T Consensus 335 ~~~~~~~~ 342 (374)
T 1qzz_A 335 SERTSGST 342 (374)
T ss_dssp EEEEECCS
T ss_pred EEEECCCC
Confidence 88776433
No 81
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.34 E-value=3.3e-06 Score=82.53 Aligned_cols=157 Identities=16% Similarity=0.180 Sum_probs=93.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhh-cCCC---Ccceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFK-SVPL---SKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~-~l~~---~~~~f~~ 138 (371)
+.-+|+|+|||+|..+..+. + + .| ..+++.-|+|.- -...+ .+.. ..+ +.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~~--~~~a~~~~~~~~~~~~--v~ 232 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCV--------Q-Y----------NK---EVEVTIVDLPQQ--LEMMRKQTAGLSGSER--IH 232 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHH--------H-H----------ST---TCEEEEEECHHH--HHHHHHHHTTCTTGGG--EE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------H-h----------CC---CCEEEEEeCHHH--HHHHHHHHHhcCcccc--eE
Confidence 45799999999999988777 3 2 23 457888898531 11111 1111 112 22
Q ss_pred ccCCCccccc--CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 139 GVPGSFHGRL--FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 139 gvpgSFy~rL--fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
-+.|+|+..- +| +++|+++++..||.+ |. .|...+|+.-++
T Consensus 233 ~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~---~~---------------------------------~~~~~~l~~~~~ 275 (363)
T 3dp7_A 233 GHGANLLDRDVPFP-TGFDAVWMSQFLDCF---SE---------------------------------EEVISILTRVAQ 275 (363)
T ss_dssp EEECCCCSSSCCCC-CCCSEEEEESCSTTS---CH---------------------------------HHHHHHHHHHHH
T ss_pred EEEccccccCCCCC-CCcCEEEEechhhhC---CH---------------------------------HHHHHHHHHHHH
Confidence 2345566542 45 899999999999842 32 234457888889
Q ss_pred hcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 217 ELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 217 EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
-|+|||++++.-...++... ....+.. .....+|... .......++.+|+++++++.| |+++.
T Consensus 276 ~L~pgG~l~i~e~~~~~~~~-----~~~~~~~-~~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~~v~ 338 (363)
T 3dp7_A 276 SIGKDSKVYIMETLWDRQRY-----ETASYCL-TQISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LEVEE 338 (363)
T ss_dssp HCCTTCEEEEEECCTTSCSS-----HHHHHHH-HHHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EEESC
T ss_pred hcCCCcEEEEEeeccCCccc-----cchhhHH-HHhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-CeEEE
Confidence 99999999887654433211 0001111 1111111100 011123569999999999987 98876
Q ss_pred EEE
Q 017439 297 MNT 299 (371)
Q Consensus 297 ~e~ 299 (371)
+..
T Consensus 339 ~~~ 341 (363)
T 3dp7_A 339 IQD 341 (363)
T ss_dssp CCC
T ss_pred EEe
Confidence 653
No 82
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.33 E-value=3.2e-06 Score=75.61 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=61.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gvp 141 (371)
..+|+|+|||+|..+..+. + + .| +++..|+-..-....=+.+. ..+--|..+.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~--------~-~----------~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d- 93 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLE--------D-Y----------GF-----EVVGVDISEDMIRKAREYAKSRESNVEFIVGD- 93 (227)
T ss_dssp CCEEEEETCTTSHHHHHHH--------H-T----------TC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECC-
T ss_pred CCeEEEEeccCCHHHHHHH--------H-c----------CC-----EEEEEECCHHHHHHHHHHHHhcCCCceEEECc-
Confidence 5799999999998887665 2 1 11 34455543222111111110 0111233332
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+.+--+|++++|+++++.++|+.. + .|...+|+.-++-|+||
T Consensus 94 --~~~~~~~~~~~D~v~~~~~~~~~~--~----------------------------------~~~~~~l~~~~~~L~~g 135 (227)
T 1ve3_A 94 --ARKLSFEDKTFDYVIFIDSIVHFE--P----------------------------------LELNQVFKEVRRVLKPS 135 (227)
T ss_dssp --TTSCCSCTTCEEEEEEESCGGGCC--H----------------------------------HHHHHHHHHHHHHEEEE
T ss_pred --hhcCCCCCCcEEEEEEcCchHhCC--H----------------------------------HHHHHHHHHHHHHcCCC
Confidence 222225778999999999955411 1 23445788888999999
Q ss_pred ceEEEEecCc
Q 017439 222 GLLLLLTPTI 231 (371)
Q Consensus 222 G~lvl~~~gr 231 (371)
|++++..+..
T Consensus 136 G~l~~~~~~~ 145 (227)
T 1ve3_A 136 GKFIMYFTDL 145 (227)
T ss_dssp EEEEEEEECH
T ss_pred cEEEEEecCh
Confidence 9999988653
No 83
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.32 E-value=1.2e-05 Score=78.65 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=91.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+..+|+|+|||+|..+..+. + + .| .++++.-|+| ..-...+.++ + +.-+.|
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~--------~-~----------~~---~~~~~~~D~~--~~~~~a~~~~---~--v~~~~~ 259 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELII--------S-K----------YP---LIKGINFDLP--QVIENAPPLS---G--IEHVGG 259 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECH--HHHTTCCCCT---T--EEEEEC
T ss_pred CCCEEEEeCCCCcHHHHHHH--------H-H----------CC---CCeEEEeChH--HHHHhhhhcC---C--CEEEeC
Confidence 45799999999999988776 3 2 23 4567778874 2222222221 2 333455
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.|.+ -+|. +|+++++.+||++ |. .+...+|+.-++-|+|||
T Consensus 260 d~~~-~~~~--~D~v~~~~~lh~~---~d---------------------------------~~~~~~l~~~~~~L~pgG 300 (372)
T 1fp1_D 260 DMFA-SVPQ--GDAMILKAVCHNW---SD---------------------------------EKCIEFLSNCHKALSPNG 300 (372)
T ss_dssp CTTT-CCCC--EEEEEEESSGGGS---CH---------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred Cccc-CCCC--CCEEEEecccccC---CH---------------------------------HHHHHHHHHHHHhcCCCC
Confidence 6776 3565 8999999999973 32 123357888889999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHH---H-HcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDL---A-NMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~m---v-~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
++++.-...++... ....+.. ..+.++ + ..| ..++.+|+++++++.| |++.++.
T Consensus 301 ~l~i~e~~~~~~~~------~~~~~~~-~~~~d~~~~~~~~~--------------~~~t~~e~~~ll~~aG-f~~~~~~ 358 (372)
T 1fp1_D 301 KVIIVEFILPEEPN------TSEESKL-VSTLDNLMFITVGG--------------RERTEKQYEKLSKLSG-FSKFQVA 358 (372)
T ss_dssp EEEEEEEEECSSCC------SSHHHHH-HHHHHHHHHHHHSC--------------CCEEHHHHHHHHHHTT-CSEEEEE
T ss_pred EEEEEEeccCCCCc------cchHHHH-HHHhhHHHHhccCC--------------ccCCHHHHHHHHHHCC-CceEEEE
Confidence 99988544433211 0011101 111111 1 122 1469999999999987 9887776
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 359 ~~ 360 (372)
T 1fp1_D 359 CR 360 (372)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 84
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.32 E-value=1.4e-06 Score=81.66 Aligned_cols=113 Identities=17% Similarity=0.218 Sum_probs=71.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC---Ccce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL---SKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~---~~~~ 135 (371)
...+|+|+|||+|..++.+. + + ..+|+..|+-..--...-+.. .. .+-.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLV--------E-E---------------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHH--------H-T---------------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred CCCEEEEecCCCCHHHHHHH--------H-C---------------CCeEEEEECCHHHHHHHHHhhhhcccccccceee
Confidence 35799999999999988776 2 1 114666666543322222111 00 0112
Q ss_pred eeeccCCCcccccCCCCceeEEEec-CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTS-NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss-~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
+..+..-.+-..++|++++|+|+|+ .++|++...... .+++..+|+.-
T Consensus 113 ~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~-------------------------------~~~~~~~l~~~ 161 (293)
T 3thr_A 113 IEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD-------------------------------QSEHRLALKNI 161 (293)
T ss_dssp EEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS-------------------------------SHHHHHHHHHH
T ss_pred EeecChhhCccccccCCCeEEEEEcChHHhhcCccccC-------------------------------HHHHHHHHHHH
Confidence 3333311211233789999999999 899996653321 14566789999
Q ss_pred HhhcccCceEEEEecC
Q 017439 215 AQELVPGGLLLLLTPT 230 (371)
Q Consensus 215 a~EL~pGG~lvl~~~g 230 (371)
++-|+|||++++....
T Consensus 162 ~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 162 ASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHTEEEEEEEEEEEEC
T ss_pred HHHcCCCeEEEEEeCC
Confidence 9999999999999864
No 85
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.31 E-value=2.8e-06 Score=76.10 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=65.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--------cce
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--------KKY 135 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--------~~~ 135 (371)
..+|+|+|||+|..+..+. + + .| ..+++.-|+...--...-+.+... +--
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~-~----------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILL--------K-D----------SF---FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQ 87 (217)
T ss_dssp CCEEEEETCTTCHHHHHHH--------H-C----------TT---CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEE
T ss_pred CCEEEEeCCCCCHHHHHHH--------h-h----------CC---CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceE
Confidence 4699999999999988776 2 1 11 235666676544433332222211 112
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
|..+. +...-++.+++|+++++.++||+ |. .++..+|+.-+
T Consensus 88 ~~~~d---~~~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~ 128 (217)
T 3jwh_A 88 LIQGA---LTYQDKRFHGYDAATVIEVIEHL---DL---------------------------------SRLGAFERVLF 128 (217)
T ss_dssp EEECC---TTSCCGGGCSCSEEEEESCGGGC---CH---------------------------------HHHHHHHHHHH
T ss_pred EEeCC---cccccccCCCcCEEeeHHHHHcC---CH---------------------------------HHHHHHHHHHH
Confidence 33332 22222456899999999999996 32 24456888888
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||.++++.
T Consensus 129 ~~LkpgG~li~~~ 141 (217)
T 3jwh_A 129 EFAQPKIVIVTTP 141 (217)
T ss_dssp TTTCCSEEEEEEE
T ss_pred HHcCCCEEEEEcc
Confidence 9999999766654
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.30 E-value=6.4e-06 Score=76.96 Aligned_cols=138 Identities=18% Similarity=0.182 Sum_probs=84.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gv 140 (371)
...+|+|+|||+|.+++.+... ..+|+..|.-..--...=+.+... +--|..+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~------------------------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d 175 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL------------------------GYDVTSWDHNENSIAFLNETKEKENLNISTALYD 175 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCCCHHHHHHHHC------------------------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEec
Confidence 3579999999999999877621 114555555443222211111100 11233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+. .+.+++++|+++|+.++||++. .++..+|+.-.+-|+|
T Consensus 176 ---~~-~~~~~~~fD~i~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~Lkp 215 (286)
T 3m70_A 176 ---IN-AANIQENYDFIVSTVVFMFLNR------------------------------------ERVPSIIKNMKEHTNV 215 (286)
T ss_dssp ---GG-GCCCCSCEEEEEECSSGGGSCG------------------------------------GGHHHHHHHHHHTEEE
T ss_pred ---cc-cccccCCccEEEEccchhhCCH------------------------------------HHHHHHHHHHHHhcCC
Confidence 22 2333789999999999999632 2344578888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||++++......+..+. -..+.+..+.+|+++.++. |++...+.
T Consensus 216 gG~l~i~~~~~~~~~~~--------------------------------~~~~~~~~~~~~l~~~~~~---~~~~~~~~ 259 (286)
T 3m70_A 216 GGYNLIVAAMSTDDVPC--------------------------------PLPFSFTFAENELKEYYKD---WEFLEYNE 259 (286)
T ss_dssp EEEEEEEEEBCCSSSCC--------------------------------SSCCSCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred CcEEEEEEecCCCCCCC--------------------------------CCCccccCCHHHHHHHhcC---CEEEEEEc
Confidence 99988876443322110 0112456788999999864 88877754
No 87
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.30 E-value=1.6e-06 Score=82.21 Aligned_cols=48 Identities=17% Similarity=0.275 Sum_probs=37.4
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
++++++|+|+|...+||+.- ..-..++..+|+.-++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl--------------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL--------------------------------NWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH--------------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhh--------------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 46899999999999999420 0112466778999999999999999964
No 88
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.29 E-value=4.2e-06 Score=74.38 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=78.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+ . .+ +++..|....--...-+.. .+--+..+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---------~------------~~-----~v~~vD~s~~~~~~a~~~~--~~~~~~~~d-- 85 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---------P------------YP-----QKVGVEPSEAMLAVGRRRA--PEATWVRAW-- 85 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---------C------------CS-----EEEEECCCHHHHHHHHHHC--TTSEEECCC--
T ss_pred CCCeEEEECCCCCHhHHhC---------C------------CC-----eEEEEeCCHHHHHHHHHhC--CCcEEEEcc--
Confidence 4569999999999876644 1 10 3444554332222211111 111222222
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+.+--+|++++|+++++.++||+.. | ..+|+.-.+-|+|||
T Consensus 86 -~~~~~~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~L~pgG 126 (211)
T 2gs9_A 86 -GEALPFPGESFDVVLLFTTLEFVED-V-------------------------------------ERVLLEARRVLRPGG 126 (211)
T ss_dssp -TTSCCSCSSCEEEEEEESCTTTCSC-H-------------------------------------HHHHHHHHHHEEEEE
T ss_pred -cccCCCCCCcEEEEEEcChhhhcCC-H-------------------------------------HHHHHHHHHHcCCCC
Confidence 1221257889999999999999642 1 136777778999999
Q ss_pred eEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhh
Q 017439 223 LLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIK 287 (371)
Q Consensus 223 ~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~ 287 (371)
++++..+...+ .|..+ ...+...|.. ..-...+.|.+|++++++
T Consensus 127 ~l~i~~~~~~~-----------~~~~~---~~~~~~~~~~-------~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 127 ALVVGVLEALS-----------PWAAL---YRRLGEKGVL-------PWAQARFLAREDLKALLG 170 (211)
T ss_dssp EEEEEEECTTS-----------HHHHH---HHHHHHTTCT-------TGGGCCCCCHHHHHHHHC
T ss_pred EEEEEecCCcC-----------cHHHH---HHHHhhccCc-------cccccccCCHHHHHHHhc
Confidence 99999876532 22222 1112122311 111244689999999999
No 89
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.27 E-value=1.7e-06 Score=77.26 Aligned_cols=69 Identities=23% Similarity=0.322 Sum_probs=51.9
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+++++.++|| + |...+|+.-++-|+|||++++..
T Consensus 111 ~~~~~fD~v~~~~~l~~----~-----------------------------------~~~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 111 LEDESVDVAVFCLSLMG----T-----------------------------------NIRDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp CCTTCEEEEEEESCCCS----S-----------------------------------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEeEEEEehhccc----c-----------------------------------CHHHHHHHHHHhCCCCeEEEEEE
Confidence 57889999999999996 2 11236777778899999999975
Q ss_pred cCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEe
Q 017439 229 PTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTF 300 (371)
Q Consensus 229 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~ 300 (371)
.... +++.+++.+.+++.| |+++..+..
T Consensus 152 ~~~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~~ 179 (215)
T 2zfu_A 152 VSSR-------------------------------------------FEDVRTFLRAVTKLG-FKIVSKDLT 179 (215)
T ss_dssp CGGG-------------------------------------------CSCHHHHHHHHHHTT-EEEEEEECC
T ss_pred cCCC-------------------------------------------CCCHHHHHHHHHHCC-CEEEEEecC
Confidence 3210 228899999999887 988776543
No 90
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.27 E-value=1.2e-05 Score=78.03 Aligned_cols=153 Identities=15% Similarity=0.135 Sum_probs=93.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| ..+++.-|+| .--...=+.+ .. .+--|.
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~ 245 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAML--------K-H----------FP---ELDSTILNLP-GAIDLVNENAAEKGVADRMRGI 245 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------H-H----------CT---TCEEEEEECG-GGHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCCEEEEECCcccHHHHHHH--------H-H----------CC---CCeEEEEecH-HHHHHHHHHHHhcCCCCCEEEE
Confidence 346799999999999888776 3 2 23 4578888983 2222211111 11 112233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+.|.+--+|+. |+++++..+|.+ |+ ++...+|+.-++-
T Consensus 246 ---~~d~~~~~~~~~--D~v~~~~vlh~~---~d---------------------------------~~~~~~l~~~~~~ 284 (359)
T 1x19_A 246 ---AVDIYKESYPEA--DAVLFCRILYSA---NE---------------------------------QLSTIMCKKAFDA 284 (359)
T ss_dssp ---ECCTTTSCCCCC--SEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHTT
T ss_pred ---eCccccCCCCCC--CEEEEechhccC---CH---------------------------------HHHHHHHHHHHHh
Confidence 345655445554 999999999842 32 2345578888899
Q ss_pred cccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHH---cCCCchhhhcccCcccccCCHHHHHHHhhcCCceEE
Q 017439 218 LVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLAN---MGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSI 294 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~---eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I 294 (371)
|+|||++++.-...++.. ...+..+. .|.. .|. ....+++.+|+++++++.| |++
T Consensus 285 L~pgG~l~i~e~~~~~~~-------~~~~~~~~----~~~~~~~~g~----------~~~~~~t~~e~~~ll~~aG-f~~ 342 (359)
T 1x19_A 285 MRSGGRLLILDMVIDDPE-------NPNFDYLS----HYILGAGMPF----------SVLGFKEQARYKEILESLG-YKD 342 (359)
T ss_dssp CCTTCEEEEEEECCCCTT-------SCCHHHHH----HHGGGGGSSC----------CCCCCCCGGGHHHHHHHHT-CEE
T ss_pred cCCCCEEEEEecccCCCC-------CchHHHHH----HHHHhcCCCC----------cccCCCCHHHHHHHHHHCC-Cce
Confidence 999999977665544321 01122221 2211 121 1223589999999999987 998
Q ss_pred EEEEEe
Q 017439 295 EIMNTF 300 (371)
Q Consensus 295 ~~~e~~ 300 (371)
.++...
T Consensus 343 v~~~~~ 348 (359)
T 1x19_A 343 VTMVRK 348 (359)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 777654
No 91
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.25 E-value=1.1e-05 Score=78.06 Aligned_cols=156 Identities=17% Similarity=0.158 Sum_probs=93.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~ 137 (371)
.+..+|+|+|||+|..+..+. + + .| .++++.-|+| .-....=+.+ ... +--|.
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~--------~-~----------~~---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~ 238 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIA--------R-R----------AP---HVSATVLEMA-GTVDTARSYLKDEGLSDRVDVV 238 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECT-THHHHHHHHHHHTTCTTTEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHH--------H-h----------CC---CCEEEEecCH-HHHHHHHHHHHhcCCCCceEEE
Confidence 345799999999999887776 3 2 22 4567788883 2222111111 111 22233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. ++|.+ -+|.+ +|+++++..+|.+ |. .+...+|+.-.+-
T Consensus 239 ~---~d~~~-~~~~~-~D~v~~~~vl~~~---~~---------------------------------~~~~~~l~~~~~~ 277 (360)
T 1tw3_A 239 E---GDFFE-PLPRK-ADAIILSFVLLNW---PD---------------------------------HDAVRILTRCAEA 277 (360)
T ss_dssp E---CCTTS-CCSSC-EEEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHT
T ss_pred e---CCCCC-CCCCC-ccEEEEcccccCC---CH---------------------------------HHHHHHHHHHHHh
Confidence 3 45554 34554 9999999999863 32 2334577888889
Q ss_pred cccCceEEEEecC-cCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEE
Q 017439 218 LVPGGLLLLLTPT-IRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEI 296 (371)
Q Consensus 218 L~pGG~lvl~~~g-r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~ 296 (371)
|+|||++++.-.. .++... ..+..+.+.. -|+..| ...++.+|+++++++.| |++++
T Consensus 278 L~pgG~l~i~e~~~~~~~~~-------~~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~ 335 (360)
T 1tw3_A 278 LEPGGRILIHERDDLHENSF-------NEQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVVEE 335 (360)
T ss_dssp EEEEEEEEEEECCBCGGGCC-------SHHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEE
T ss_pred cCCCcEEEEEEEeccCCCCC-------cchhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEE
Confidence 9999999987655 332210 0122111111 112112 12579999999999987 99988
Q ss_pred EEEeecC
Q 017439 297 MNTFTHP 303 (371)
Q Consensus 297 ~e~~~~p 303 (371)
+...+.+
T Consensus 336 ~~~~~~~ 342 (360)
T 1tw3_A 336 VRQLPSP 342 (360)
T ss_dssp EEEEECS
T ss_pred EEeCCCC
Confidence 8776543
No 92
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.23 E-value=4.5e-06 Score=73.80 Aligned_cols=110 Identities=15% Similarity=0.155 Sum_probs=67.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gv 140 (371)
...+|+|+|||+|..++..+. . . ..+++..|.-..--...-+.+. ..+--|..+.
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~-------~------------~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d 79 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFV-------E------------D----GYKTYGIEISDLQLKKAENFSRENNFKLNISKGD 79 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHH-------H------------T----TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECC
T ss_pred CCCEEEEECCCCCHHHHHHHH-------h------------C----CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECc
Confidence 357999999999998776551 1 0 1245566654432222111110 0111233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
. ..--+|++++|+++++.++|++ |. .|...+|+.-++-|+|
T Consensus 80 ~---~~~~~~~~~fD~v~~~~~l~~~---~~---------------------------------~~~~~~l~~~~~~Lkp 120 (209)
T 2p8j_A 80 I---RKLPFKDESMSFVYSYGTIFHM---RK---------------------------------NDVKEAIDEIKRVLKP 120 (209)
T ss_dssp T---TSCCSCTTCEEEEEECSCGGGS---CH---------------------------------HHHHHHHHHHHHHEEE
T ss_pred h---hhCCCCCCceeEEEEcChHHhC---CH---------------------------------HHHHHHHHHHHHHcCC
Confidence 1 1212578899999999999985 21 3455678888899999
Q ss_pred CceEEEEecCcCCC
Q 017439 221 GGLLLLLTPTIRDG 234 (371)
Q Consensus 221 GG~lvl~~~gr~~~ 234 (371)
||++++.....++.
T Consensus 121 gG~l~~~~~~~~~~ 134 (209)
T 2p8j_A 121 GGLACINFLTTKDE 134 (209)
T ss_dssp EEEEEEEEEETTST
T ss_pred CcEEEEEEecccch
Confidence 99999999876543
No 93
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.20 E-value=3.7e-06 Score=75.97 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=35.2
Q ss_pred CCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEec
Q 017439 151 ESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 151 ~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
++++|+++++. ++||+.. ..|...+|+.-++-|+|||++++.+.
T Consensus 94 ~~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 94 PEPVDAITILCDSLNYLQT-----------------------------------EADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp SSCEEEEEECTTGGGGCCS-----------------------------------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEEeCCchhhcCC-----------------------------------HHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 37899999987 9999532 13455678888889999999999775
Q ss_pred C
Q 017439 230 T 230 (371)
Q Consensus 230 g 230 (371)
.
T Consensus 139 ~ 139 (243)
T 3d2l_A 139 S 139 (243)
T ss_dssp C
T ss_pred C
Confidence 4
No 94
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.19 E-value=1.3e-05 Score=69.59 Aligned_cols=71 Identities=17% Similarity=0.058 Sum_probs=44.6
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCCc
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGSF 144 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgSF 144 (371)
-+|+|+|||+|..++.+... - +|+..|+-..--.. ..+--|..+. +
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~------------------------~-~v~gvD~s~~~~~~------~~~~~~~~~d---~ 70 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKR------------------------N-TVVSTDLNIRALES------HRGGNLVRAD---L 70 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTT------------------------S-EEEEEESCHHHHHT------CSSSCEEECS---T
T ss_pred CeEEEeccCccHHHHHHHhc------------------------C-cEEEEECCHHHHhc------ccCCeEEECC---h
Confidence 49999999999988877621 1 34444443322111 1112233333 3
Q ss_pred ccccCCCCceeEEEecCCccccCCCC
Q 017439 145 HGRLFPESSLHVAHTSNALPWLSKIP 170 (371)
Q Consensus 145 y~rLfP~~Svd~~~Ss~alHWLS~vP 170 (371)
.+ .+|++++|+++|+..+||.+..+
T Consensus 71 ~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 71 LC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp TT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred hh-hcccCCCCEEEECCCCccCCccc
Confidence 33 45669999999999999977643
No 95
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.19 E-value=2.3e-06 Score=79.16 Aligned_cols=160 Identities=15% Similarity=0.194 Sum_probs=89.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + + ..+++..|.-..--...-+... .. +..+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~--------~-~---------------~~~v~gvD~s~~~l~~a~~~~~--~~-~~~~d-- 104 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQ--------E-R---------------GFEVVLVDPSKEMLEVAREKGV--KN-VVEAK-- 104 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------T-T---------------TCEEEEEESCHHHHHHHHHHTC--SC-EEECC--
T ss_pred CCCeEEEeCCCcCHHHHHHH--------H-c---------------CCeEEEEeCCHHHHHHHHhhcC--CC-EEECc--
Confidence 34699999999999988765 2 1 1246666664433222222222 11 44443
Q ss_pred CcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+..--+|++++|+++++. .+||... | ..+|+.-++-|+||
T Consensus 105 -~~~~~~~~~~fD~v~~~~~~~~~~~~-~-------------------------------------~~~l~~~~~~Lkpg 145 (260)
T 2avn_A 105 -AEDLPFPSGAFEAVLALGDVLSYVEN-K-------------------------------------DKAFSEIRRVLVPD 145 (260)
T ss_dssp -TTSCCSCTTCEEEEEECSSHHHHCSC-H-------------------------------------HHHHHHHHHHEEEE
T ss_pred -HHHCCCCCCCEEEEEEcchhhhcccc-H-------------------------------------HHHHHHHHHHcCCC
Confidence 222236789999999986 4677433 2 23677778899999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++...+......... ... .|+. +..+...|...... ..+.++.++.+++|++++ .| |+++......
T Consensus 146 G~l~~~~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~~~~~~~ 214 (260)
T 2avn_A 146 GLLIATVDNFYTFLQQMI-EKD-AWDQ----ITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETVDIRGIG 214 (260)
T ss_dssp EEEEEEEEBHHHHHHHHH-HTT-CHHH----HHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEEEEEEEC
T ss_pred eEEEEEeCChHHHHHHhh-cch-hHHH----HHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEEEEECCC
Confidence 999999876531100000 000 1222 22223344332110 011122346789998887 45 9998887663
No 96
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.18 E-value=9.2e-06 Score=78.94 Aligned_cols=149 Identities=15% Similarity=0.098 Sum_probs=90.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPGS 143 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpgS 143 (371)
..+|+|+|||+|..+..+. + + .| ..+++.-|+| ..-...+.+ .+ +.-+.|.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~--~~~~~a~~~---~~--v~~~~~d 244 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIH--------E-I----------FP---HLKCTVFDQP--QVVGNLTGN---EN--LNFVGGD 244 (358)
T ss_dssp CSEEEEETCTTSHHHHHHH--------H-H----------CT---TSEEEEEECH--HHHSSCCCC---SS--EEEEECC
T ss_pred CCEEEEECCCcCHHHHHHH--------H-H----------CC---CCeEEEeccH--HHHhhcccC---CC--cEEEeCc
Confidence 4699999999999988777 3 2 23 3466777885 222222221 12 3334567
Q ss_pred cccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc---
Q 017439 144 FHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP--- 220 (371)
Q Consensus 144 Fy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p--- 220 (371)
|+. -+| ++|+++++..||++ |. .+...+|+.-.+-|+|
T Consensus 245 ~~~-~~~--~~D~v~~~~vlh~~---~d---------------------------------~~~~~~l~~~~~~L~p~~~ 285 (358)
T 1zg3_A 245 MFK-SIP--SADAVLLKWVLHDW---ND---------------------------------EQSLKILKNSKEAISHKGK 285 (358)
T ss_dssp TTT-CCC--CCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHTGGGGG
T ss_pred cCC-CCC--CceEEEEcccccCC---CH---------------------------------HHHHHHHHHHHHhCCCCCC
Confidence 777 345 49999999999973 32 1233478888899999
Q ss_pred CceEEEEecCcCCCCCCCCCCCc-chHHHHHHHHHHHH-HcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEG-TNFDYLGSCLYDLA-NMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMN 298 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~-~~~~~l~~al~~mv-~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e 298 (371)
||++++.-...++... ... .....+.+. .-|+ ..| ..++.+|+++++++.| |++.++.
T Consensus 286 gG~l~i~e~~~~~~~~----~~~~~~~~~~~d~-~~~~~~~g--------------~~~t~~e~~~ll~~aG-f~~~~~~ 345 (358)
T 1zg3_A 286 DGKVIIIDISIDETSD----DRGLTELQLDYDL-VMLTMFLG--------------KERTKQEWEKLIYDAG-FSSYKIT 345 (358)
T ss_dssp GCEEEEEECEECTTCS----CHHHHHHHHHHHH-HHHHHHSC--------------CCEEHHHHHHHHHHTT-CCEEEEE
T ss_pred CcEEEEEEeccCCCCc----cchhhhHHHhhCH-HHhccCCC--------------CCCCHHHHHHHHHHcC-CCeeEEE
Confidence 9999987654433211 000 001111111 1111 112 1569999999999987 9887765
Q ss_pred Ee
Q 017439 299 TF 300 (371)
Q Consensus 299 ~~ 300 (371)
..
T Consensus 346 ~~ 347 (358)
T 1zg3_A 346 PI 347 (358)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 97
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.16 E-value=2.4e-05 Score=70.03 Aligned_cols=165 Identities=12% Similarity=0.096 Sum_probs=91.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
.-+|+|+|||+|..++.+. + + .| ..+++..|.-..--...-+.+ ...+-.|+.+.
T Consensus 42 ~~~vLDiGcG~G~~~~~la--------~-~----------~p---~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d 99 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMA--------K-Q----------NP---DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVD 99 (214)
T ss_dssp CCEEEEESCTTSHHHHHHH--------H-H----------CT---TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECC
T ss_pred CCeEEEEccCcCHHHHHHH--------H-H----------CC---CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 4689999999999998776 2 1 22 335677776543322222211 11122344444
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
... ..+.+|++++|+++++...+|..+.... . .-+...||+.-++-|+|
T Consensus 100 ~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~~~-~-----------------------------~~~~~~~l~~~~~~Lkp 148 (214)
T 1yzh_A 100 GSD-LTDYFEDGEIDRLYLNFSDPWPKKRHEK-R-----------------------------RLTYKTFLDTFKRILPE 148 (214)
T ss_dssp SSC-GGGTSCTTCCSEEEEESCCCCCSGGGGG-G-----------------------------STTSHHHHHHHHHHSCT
T ss_pred HHH-HHhhcCCCCCCEEEEECCCCccccchhh-h-----------------------------ccCCHHHHHHHHHHcCC
Confidence 333 3345788999999999888774321000 0 00123477777788999
Q ss_pred CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhh-hcccCcccccCCHHHHHHHhhcCCceEEEEE
Q 017439 221 GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEK-VDSFNVPMYYPFLGELMGHIKRNKNFSIEIM 297 (371)
Q Consensus 221 GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~-~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~ 297 (371)
||.+++..... +....++..|.+.|.-..+. .|-..-+.......+++....+.| +.|-++
T Consensus 149 gG~l~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~~~ 210 (214)
T 1yzh_A 149 NGEIHFKTDNR---------------GLFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIYRV 210 (214)
T ss_dssp TCEEEEEESCH---------------HHHHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCEEE
T ss_pred CcEEEEEeCCH---------------HHHHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeEEE
Confidence 99999865221 22334444555556432211 122222333344567777777766 555444
No 98
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.08 E-value=7.6e-06 Score=75.49 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=42.2
Q ss_pred HHHHHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcC
Q 017439 210 FLNARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRN 289 (371)
Q Consensus 210 FL~~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~ 289 (371)
+|+.-++-|+|||++++.+ .+ .|+ ..+..+-..|.+..... +..+.+|+.+.+++.
T Consensus 119 ~l~~i~rvLkpgG~lv~~~--~p------------~~e---~~~~~~~~~G~~~d~~~-------~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALI--KP------------QFE---AGREQVGKNGIIRDPKV-------HQMTIEKVLKTATQL 174 (232)
T ss_dssp THHHHHHHSCTTCEEEEEE--CH------------HHH---SCHHHHC-CCCCCCHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEEE--Cc------------ccc---cCHHHhCcCCeecCcch-------hHHHHHHHHHHHHHC
Confidence 4667778999999999965 11 011 11333333455432221 223889999999998
Q ss_pred CceEEEEEEEee
Q 017439 290 KNFSIEIMNTFT 301 (371)
Q Consensus 290 g~F~I~~~e~~~ 301 (371)
| |++..++..+
T Consensus 175 G-f~v~~~~~~p 185 (232)
T 3opn_A 175 G-FSVKGLTFSP 185 (232)
T ss_dssp T-EEEEEEEECS
T ss_pred C-CEEEEEEEcc
Confidence 7 9998887653
No 99
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.06 E-value=5.3e-05 Score=73.37 Aligned_cols=151 Identities=14% Similarity=0.082 Sum_probs=91.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
+..+|+|+|||+|..+..+. + + .| ..+++.-|+|. .-...+.. .+ +.-+.|
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~-~----------~p---~~~~~~~D~~~--~~~~a~~~---~~--v~~~~~ 238 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------E-T----------FP---KLKCIVFDRPQ--VVENLSGS---NN--LTYVGG 238 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------H-H----------CT---TCEEEEEECHH--HHTTCCCB---TT--EEEEEC
T ss_pred cCceEEEeCCCccHHHHHHH--------H-H----------CC---CCeEEEeeCHH--HHhhcccC---CC--cEEEec
Confidence 45799999999998887766 3 2 23 45788888842 11122221 12 333456
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc--
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP-- 220 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p-- 220 (371)
.|++ -+|+ +|+++++.+||.+ |. .+...+|+.-++-|+|
T Consensus 239 d~~~-~~p~--~D~v~~~~~lh~~---~d---------------------------------~~~~~~l~~~~~~L~p~~ 279 (352)
T 1fp2_A 239 DMFT-SIPN--ADAVLLKYILHNW---TD---------------------------------KDCLRILKKCKEAVTNDG 279 (352)
T ss_dssp CTTT-CCCC--CSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHHHSGGG
T ss_pred cccC-CCCC--ccEEEeehhhccC---CH---------------------------------HHHHHHHHHHHHhCCCCC
Confidence 6766 3463 9999999999952 32 1233478888889999
Q ss_pred -CceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEE
Q 017439 221 -GGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNT 299 (371)
Q Consensus 221 -GG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~ 299 (371)
||++++.-...++... ...+.. ...+.++.--. + +-..++.+|+++++++.| |++.++..
T Consensus 280 ~gG~l~i~e~~~~~~~~------~~~~~~-~~~~~d~~~~~---------~--~g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 280 KRGKVTIIDMVIDKKKD------ENQVTQ-IKLLMDVNMAC---------L--NGKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp CCCEEEEEECEECTTTS------CHHHHH-HHHHHHHHGGG---------G--TCCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCcEEEEEEeecCCCCC------ccchhh-hHhhccHHHHh---------c--cCCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 9999988765543211 000011 11122221000 0 122468999999999987 98877654
Q ss_pred e
Q 017439 300 F 300 (371)
Q Consensus 300 ~ 300 (371)
.
T Consensus 341 ~ 341 (352)
T 1fp2_A 341 L 341 (352)
T ss_dssp E
T ss_pred c
Confidence 3
No 100
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.05 E-value=1.8e-05 Score=70.76 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=82.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-------CCCcc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-------PLSKK 134 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-------~~~~~ 134 (371)
....+|+|+|||+|..+..+. + + .| ..+|+..|+-..-...+-+.. ...+-
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la--------~-~----------~p---~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v 83 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVA--------R-Q----------NP---SRLVVALDADKSRMEKISAKAAAKPAKGGLPNL 83 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHH--------H-H----------CT---TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTE
T ss_pred cCCCEEEEecCCCCHHHHHHH--------H-H----------CC---CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCce
Confidence 345799999999999998877 2 2 22 347888888776544432111 11122
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
.|..+. +.+--+++++ |.++. .+.|....... -.|...+|+.-
T Consensus 84 ~~~~~d---~~~l~~~~~~-d~v~~--~~~~~~~~~~~-------------------------------~~~~~~~l~~~ 126 (218)
T 3mq2_A 84 LYLWAT---AERLPPLSGV-GELHV--LMPWGSLLRGV-------------------------------LGSSPEMLRGM 126 (218)
T ss_dssp EEEECC---STTCCSCCCE-EEEEE--ESCCHHHHHHH-------------------------------HTSSSHHHHHH
T ss_pred EEEecc---hhhCCCCCCC-CEEEE--Eccchhhhhhh-------------------------------hccHHHHHHHH
Confidence 344444 2221235566 66662 22232110000 11223467788
Q ss_pred HhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCccccc--CCHHHHHHHhhcCCce
Q 017439 215 AQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYY--PFLGELMGHIKRNKNF 292 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~--ps~eE~~~~i~~~g~F 292 (371)
++-|+|||++++.+....-.... . ++. ..|.+. ...++++..+++.| |
T Consensus 127 ~~~LkpgG~l~~~~~~~~~~~~~-------------------------~--~~~--~~~~~~~~~~~~~l~~~l~~aG-f 176 (218)
T 3mq2_A 127 AAVCRPGASFLVALNLHAWRPSV-------------------------P--EVG--EHPEPTPDSADEWLAPRYAEAG-W 176 (218)
T ss_dssp HHTEEEEEEEEEEEEGGGBTTBC-------------------------G--GGT--TCCCCCHHHHHHHHHHHHHHTT-E
T ss_pred HHHcCCCcEEEEEeccccccccc-------------------------c--ccc--cCCccchHHHHHHHHHHHHHcC-C
Confidence 88999999999976432211100 0 000 111111 12455888888877 9
Q ss_pred EEEEEEEee
Q 017439 293 SIEIMNTFT 301 (371)
Q Consensus 293 ~I~~~e~~~ 301 (371)
+|..++.+.
T Consensus 177 ~i~~~~~~~ 185 (218)
T 3mq2_A 177 KLADCRYLE 185 (218)
T ss_dssp EEEEEEEEC
T ss_pred Cceeeeccc
Confidence 999998773
No 101
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.04 E-value=5.8e-05 Score=72.23 Aligned_cols=148 Identities=18% Similarity=0.117 Sum_probs=83.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeecc-C
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGV-P 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gv-p 141 (371)
...+|+|+|||+|..|..++ + + + .-+|+.-|+-.+.-..-.+.-+ +....... -
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~--------~-~----g----------a~~V~aVDvs~~mL~~a~r~~~--rv~~~~~~ni 139 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVML--------Q-N----G----------AKLVYAVDVGTNQLVWKLRQDD--RVRSMEQYNF 139 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-T----T----------CSEEEEECSSSSCSCHHHHTCT--TEEEECSCCG
T ss_pred cccEEEecCCCccHHHHHHH--------h-C----C----------CCEEEEEECCHHHHHHHHHhCc--ccceecccCc
Confidence 45699999999999998776 2 1 0 1157888887665332112111 10000000 0
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
...-..-+|..++|++++..++|||.+ +|..-++-|+||
T Consensus 140 ~~l~~~~l~~~~fD~v~~d~sf~sl~~-----------------------------------------vL~e~~rvLkpG 178 (291)
T 3hp7_A 140 RYAEPVDFTEGLPSFASIDVSFISLNL-----------------------------------------ILPALAKILVDG 178 (291)
T ss_dssp GGCCGGGCTTCCCSEEEECCSSSCGGG-----------------------------------------THHHHHHHSCTT
T ss_pred eecchhhCCCCCCCEEEEEeeHhhHHH-----------------------------------------HHHHHHHHcCcC
Confidence 000011256678999999999998622 255556789999
Q ss_pred ceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCceEEEEEEEee
Q 017439 222 GLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNFSIEIMNTFT 301 (371)
Q Consensus 222 G~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F~I~~~e~~~ 301 (371)
|++++.+--.-+.... . + -..|.+..... +..+.+++.+.++..| |.+..+...|
T Consensus 179 G~lv~lvkPqfe~~~~-~-------------~---~~~G~vrd~~~-------~~~~~~~v~~~~~~~G-f~v~~~~~sp 233 (291)
T 3hp7_A 179 GQVVALVKPQFEAGRE-Q-------------I---GKNGIVRESSI-------HEKVLETVTAFAVDYG-FSVKGLDFSP 233 (291)
T ss_dssp CEEEEEECGGGTSCGG-G-------------C---C-CCCCCCHHH-------HHHHHHHHHHHHHHTT-EEEEEEEECS
T ss_pred CEEEEEECcccccChh-h-------------c---CCCCccCCHHH-------HHHHHHHHHHHHHHCC-CEEEEEEECC
Confidence 9999974110000000 0 0 01244322111 2346888999999877 9988877543
No 102
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.99 E-value=3.5e-05 Score=71.48 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=70.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCc-ceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSK-KYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~-~~f~~gvp 141 (371)
.-.+|+|+|||+|..|..+. + .... +=.||.-|.-..--..+-+...... -..+.+..
T Consensus 77 pG~~VldlG~G~G~~~~~la--------~-~VG~------------~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~ 135 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMS--------D-IIGP------------RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDA 135 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-HHCT------------TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCT
T ss_pred CCCEEEEecCcCCHHHHHHH--------H-HhCC------------CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEec
Confidence 35799999999999999877 3 2221 1246666665544333333333322 34566666
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+....--++.+++|++|+..+.|| .+ ..+++.-.+-||||
T Consensus 136 ~~p~~~~~~~~~vDvVf~d~~~~~---~~-------------------------------------~~~l~~~~r~LKpG 175 (233)
T 4df3_A 136 RFPEKYRHLVEGVDGLYADVAQPE---QA-------------------------------------AIVVRNARFFLRDG 175 (233)
T ss_dssp TCGGGGTTTCCCEEEEEECCCCTT---HH-------------------------------------HHHHHHHHHHEEEE
T ss_pred cCccccccccceEEEEEEeccCCh---hH-------------------------------------HHHHHHHHHhccCC
Confidence 666665678889999998766655 11 12566667889999
Q ss_pred ceEEEEecCc
Q 017439 222 GLLLLLTPTI 231 (371)
Q Consensus 222 G~lvl~~~gr 231 (371)
|++++..-.+
T Consensus 176 G~lvI~ik~r 185 (233)
T 4df3_A 176 GYMLMAIKAR 185 (233)
T ss_dssp EEEEEEEECC
T ss_pred CEEEEEEecc
Confidence 9999987444
No 103
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.93 E-value=8.8e-05 Score=67.53 Aligned_cols=104 Identities=17% Similarity=0.263 Sum_probs=60.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gv 140 (371)
...+|+|+|||+|..++.+... ..+++..|+-..--...=+.+. ..+--|..+.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~------------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d 96 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER------------------------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD 96 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC------------------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECC
Confidence 4579999999999998877621 1145555553322221111111 0011233332
Q ss_pred CCCcccccCCCCceeEEEecC-CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 141 PGSFHGRLFPESSLHVAHTSN-ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~-alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
+. .+-+++++|++++.. ++|++ +. .|...+|+.-++-|+
T Consensus 97 ---~~-~~~~~~~fD~v~~~~~~~~~~---~~---------------------------------~~~~~~l~~~~~~L~ 136 (252)
T 1wzn_A 97 ---VL-EIAFKNEFDAVTMFFSTIMYF---DE---------------------------------EDLRKLFSKVAEALK 136 (252)
T ss_dssp ---GG-GCCCCSCEEEEEECSSGGGGS---CH---------------------------------HHHHHHHHHHHHHEE
T ss_pred ---hh-hcccCCCccEEEEcCCchhcC---CH---------------------------------HHHHHHHHHHHHHcC
Confidence 22 233457899999874 44553 11 345667888889999
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++.++.
T Consensus 137 pgG~li~~~~~ 147 (252)
T 1wzn_A 137 PGGVFITDFPC 147 (252)
T ss_dssp EEEEEEEEEEC
T ss_pred CCeEEEEeccc
Confidence 99999998754
No 104
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.93 E-value=2.9e-05 Score=68.41 Aligned_cols=121 Identities=19% Similarity=0.236 Sum_probs=71.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC-CcceeeeccC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL-SKKYFATGVP 141 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~-~~~~f~~gvp 141 (371)
...+|+|+|||+|..++.+. + + .+ . +++..|.-..-....=+.+.. .+--+..+..
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~--------~-~----------~~---~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~ 98 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELF--------L-G----------GF---P-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDV 98 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHH--------H-T----------TC---C-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCT
T ss_pred CCCeEEEECCCCcHHHHHHH--------H-c----------CC---C-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcch
Confidence 34689999999999998776 2 1 11 1 455556544332222222221 1122333332
Q ss_pred CCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 142 GSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
..+ -+|++++|+|+++.++|.+..... ..|... .....|...+|+.-.+-|+||
T Consensus 99 ~~~---~~~~~~fD~v~~~~~~~~~~~~~~-------~~~~~~----------------~~~~~~~~~~l~~~~~~Lkpg 152 (215)
T 2pxx_A 99 RKL---DFPSASFDVVLEKGTLDALLAGER-------DPWTVS----------------SEGVHTVDQVLSEVSRVLVPG 152 (215)
T ss_dssp TSC---CSCSSCEEEEEEESHHHHHTTTCS-------CTTSCC----------------HHHHHHHHHHHHHHHHHEEEE
T ss_pred hcC---CCCCCcccEEEECcchhhhccccc-------cccccc----------------cchhHHHHHHHHHHHHhCcCC
Confidence 221 357889999999999877542111 111110 112356677888889999999
Q ss_pred ceEEEEecCcC
Q 017439 222 GLLLLLTPTIR 232 (371)
Q Consensus 222 G~lvl~~~gr~ 232 (371)
|++++..++.+
T Consensus 153 G~li~~~~~~~ 163 (215)
T 2pxx_A 153 GRFISMTSAAP 163 (215)
T ss_dssp EEEEEEESCCH
T ss_pred CEEEEEeCCCc
Confidence 99999987754
No 105
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.92 E-value=5.6e-05 Score=66.45 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=36.3
Q ss_pred CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEEEe
Q 017439 149 FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 149 fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
+|++++|+++|..++||... + ..+ .+ ...+....+|+.-.+-|+|||+|++.+
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~-~--~~d----------------------~~--~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGN-K--IDD----------------------HL--NSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSC-H--HHH----------------------HH--HHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCcCCCCC-c--ccC----------------------HH--HHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 57889999999999999421 0 001 00 001223446777778999999999976
Q ss_pred cC
Q 017439 229 PT 230 (371)
Q Consensus 229 ~g 230 (371)
..
T Consensus 155 ~~ 156 (201)
T 2plw_A 155 YL 156 (201)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 106
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.91 E-value=5.8e-05 Score=64.67 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=65.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~ 138 (371)
....+|+|+|||+|..++.+. + + .| ..+++..|.-..-....=+.+ ....++++.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 81 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWL--------R-S----------TP---QTTAVCFEISEERRERILSNAINLGVSDRIAVQ 81 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHH--------T-T----------SS---SEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHH--------H-H----------CC---CCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEe
Confidence 345799999999999888776 3 2 22 347888887654433322221 112133444
Q ss_pred ccCCCcccccCCC--CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 139 GVPGSFHGRLFPE--SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 139 gvpgSFy~rLfP~--~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
+. ..+ -+|. +++|+++++.++|| +. +|+.-.+
T Consensus 82 ~d---~~~-~~~~~~~~~D~i~~~~~~~~----~~--------------------------------------~l~~~~~ 115 (178)
T 3hm2_A 82 QG---APR-AFDDVPDNPDVIFIGGGLTA----PG--------------------------------------VFAAAWK 115 (178)
T ss_dssp CC---TTG-GGGGCCSCCSEEEECC-TTC----TT--------------------------------------HHHHHHH
T ss_pred cc---hHh-hhhccCCCCCEEEECCcccH----HH--------------------------------------HHHHHHH
Confidence 33 222 3444 89999999999988 21 5667778
Q ss_pred hcccCceEEEEecCc
Q 017439 217 ELVPGGLLLLLTPTI 231 (371)
Q Consensus 217 EL~pGG~lvl~~~gr 231 (371)
-|+|||++++.....
T Consensus 116 ~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 116 RLPVGGRLVANAVTV 130 (178)
T ss_dssp TCCTTCEEEEEECSH
T ss_pred hcCCCCEEEEEeecc
Confidence 999999999887654
No 107
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.90 E-value=6.2e-05 Score=67.80 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=63.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
.-+|+|+|||+|..++.+.. + .| ..+++.-|.-..--...-+.+ ...+--|+.+.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~---------~----------~p---~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d 96 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAK---------Q----------NP---DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID 96 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHH---------H----------CT---TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC
T ss_pred CceEEEEecCCCHHHHHHHH---------H----------CC---CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 46899999999999988762 1 12 234555555443322211111 00111233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
-.. ....+|++++|.++++.+.+|..+.-. +.++ ....||+.-++-|+|
T Consensus 97 ~~~-l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~rl-------------------~~~~~l~~~~~~Lkp 145 (213)
T 2fca_A 97 ADT-LTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRL-------------------TYSHFLKKYEEVMGK 145 (213)
T ss_dssp GGG-HHHHCCTTSCCEEEEESCCCCCSGGGG-----------GGST-------------------TSHHHHHHHHHHHTT
T ss_pred HHH-HHhhcCcCCcCEEEEECCCCCcCcccc-----------cccc-------------------CcHHHHHHHHHHcCC
Confidence 111 123478899999999888888432100 0000 013467777789999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||++++..
T Consensus 146 gG~l~~~t 153 (213)
T 2fca_A 146 GGSIHFKT 153 (213)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEe
Confidence 99999876
No 108
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.89 E-value=9.5e-05 Score=66.43 Aligned_cols=105 Identities=13% Similarity=0.199 Sum_probs=62.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+.... . +++..|+...--...-+.++ +--|..+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~-----------------------~-~v~~~D~s~~~~~~a~~~~~--~~~~~~~d-- 91 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF-----------------------G-DTAGLELSEDMLTHARKRLP--DATLHQGD-- 91 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH-----------------------S-EEEEEESCHHHHHHHHHHCT--TCEEEECC--
T ss_pred CCCeEEEecccCCHHHHHHHHhC-----------------------C-cEEEEeCCHHHHHHHHHhCC--CCEEEECC--
Confidence 34699999999999988776321 0 24444443222111111111 11223332
Q ss_pred CcccccCCCCceeEEEe-cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccC
Q 017439 143 SFHGRLFPESSLHVAHT-SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPG 221 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~S-s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pG 221 (371)
+. .+.+++++|+++| ..++||+.. | +|+..+|+.-++-|+||
T Consensus 92 -~~-~~~~~~~~D~v~~~~~~~~~~~~-~----------------------------------~~~~~~l~~~~~~L~pg 134 (239)
T 3bxo_A 92 -MR-DFRLGRKFSAVVSMFSSVGYLKT-T----------------------------------EELGAAVASFAEHLEPG 134 (239)
T ss_dssp -TT-TCCCSSCEEEEEECTTGGGGCCS-H----------------------------------HHHHHHHHHHHHTEEEE
T ss_pred -HH-HcccCCCCcEEEEcCchHhhcCC-H----------------------------------HHHHHHHHHHHHhcCCC
Confidence 11 2223678999995 459999533 1 34566888889999999
Q ss_pred ceEEEEecCcC
Q 017439 222 GLLLLLTPTIR 232 (371)
Q Consensus 222 G~lvl~~~gr~ 232 (371)
|++++.....+
T Consensus 135 G~l~~~~~~~~ 145 (239)
T 3bxo_A 135 GVVVVEPWWFP 145 (239)
T ss_dssp EEEEECCCCCT
T ss_pred eEEEEEeccCc
Confidence 99999875544
No 109
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.88 E-value=2.8e-05 Score=68.86 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=16.1
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~ 79 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAH 79 (205)
T ss_dssp CCEEEEETCTTSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHH
Confidence 4699999999998887754
No 110
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.88 E-value=4.1e-05 Score=67.89 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..+..+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la 96 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILA 96 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 45799999999999998776
No 111
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.87 E-value=2.7e-05 Score=65.86 Aligned_cols=113 Identities=14% Similarity=0.077 Sum_probs=67.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + ++. | ..+++..|+.. - -. + .+--+..+...
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~--------~-~~~---------~---~~~v~~~D~~~-~-~~----~--~~~~~~~~d~~ 72 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVV--------T-QIG---------G---KGRIIACDLLP-M-DP----I--VGVDFLQGDFR 72 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHH--------H-HHC---------T---TCEEEEEESSC-C-CC----C--TTEEEEESCTT
T ss_pred CCCeEEEeCCCCCHHHHHHH--------H-HhC---------C---CCeEEEEECcc-c-cc----c--CcEEEEEcccc
Confidence 34699999999999888776 2 221 1 23566666544 1 11 1 12223333321
Q ss_pred Cc-----ccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 143 SF-----HGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 143 SF-----y~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.. ..+.+|++++|+++++..+||...... + .. ........+|+.-.+-
T Consensus 73 ~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~-------------------~~-----~~~~~~~~~l~~~~~~ 125 (180)
T 1ej0_A 73 DELVMKALLERVGDSKVQVVMSDMAPNMSGTPAV---D-------------------IP-----RAMYLVELALEMCRDV 125 (180)
T ss_dssp SHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH---H-------------------HH-----HHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhccCCCCceeEEEECCCccccCCCcc---c-------------------hH-----HHHHHHHHHHHHHHHH
Confidence 11 011167889999999999999544211 0 00 0112235678888889
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||++++.....
T Consensus 126 L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 126 LAPGGSFVVKVFQG 139 (180)
T ss_dssp EEEEEEEEEEEESS
T ss_pred cCCCcEEEEEEecC
Confidence 99999999987654
No 112
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.87 E-value=0.0001 Score=63.53 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=63.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCc--ceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSK--KYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~--~~f~ 137 (371)
...+|+|+|||+|..++.+... ..+++..|+-..-....=+.+ .... -.+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~------------------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~ 107 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE------------------------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVV 107 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG------------------------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc------------------------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 4569999999999988876621 013444444332211111111 1010 1222
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.. .++++++|+++++..+|| . ..++..+|+.-.+-
T Consensus 108 ~~d---~~~-~~~~~~~D~v~~~~~~~~----~---------------------------------~~~~~~~l~~~~~~ 146 (194)
T 1dus_A 108 HSD---LYE-NVKDRKYNKIITNPPIRA----G---------------------------------KEVLHRIIEEGKEL 146 (194)
T ss_dssp ECS---TTT-TCTTSCEEEEEECCCSTT----C---------------------------------HHHHHHHHHHHHHH
T ss_pred ECc---hhc-ccccCCceEEEECCCccc----c---------------------------------hhHHHHHHHHHHHH
Confidence 222 222 345788999999988887 1 13455678888899
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||++++.....
T Consensus 147 L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 147 LKDNGEIWVVIQTK 160 (194)
T ss_dssp EEEEEEEEEEEEST
T ss_pred cCCCCEEEEEECCC
Confidence 99999999998664
No 113
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.86 E-value=4.1e-05 Score=66.53 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..|+.+.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la 41 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLA 41 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 34689999999999999877
No 114
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.85 E-value=0.00015 Score=71.76 Aligned_cols=106 Identities=19% Similarity=0.210 Sum_probs=66.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gv 140 (371)
...+|+|+|||+|..++.+... ..+|+..|.-..--...=+.+.. ..--|..+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~------------------------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~- 287 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM------------------------GAEVVGVEDDLASVLSLQKGLEANALKAQALHS- 287 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT------------------------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEEC-
T ss_pred CCCEEEEEeeeCCHHHHHHHHc------------------------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEc-
Confidence 4579999999999999988721 01455555433222111111110 01122222
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
.+..-+.+++++|+|+|+..+||...... .+...||+.-.+-|+|
T Consensus 288 --D~~~~~~~~~~fD~Ii~npp~~~~~~~~~---------------------------------~~~~~~l~~~~~~Lkp 332 (381)
T 3dmg_A 288 --DVDEALTEEARFDIIVTNPPFHVGGAVIL---------------------------------DVAQAFVNVAAARLRP 332 (381)
T ss_dssp --STTTTSCTTCCEEEEEECCCCCTTCSSCC---------------------------------HHHHHHHHHHHHHEEE
T ss_pred --chhhccccCCCeEEEEECCchhhcccccH---------------------------------HHHHHHHHHHHHhcCc
Confidence 33444455689999999999998544331 4556688888899999
Q ss_pred CceEEEEe
Q 017439 221 GGLLLLLT 228 (371)
Q Consensus 221 GG~lvl~~ 228 (371)
||+++++.
T Consensus 333 GG~l~iv~ 340 (381)
T 3dmg_A 333 GGVFFLVS 340 (381)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99999986
No 115
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.85 E-value=1.5e-05 Score=72.60 Aligned_cols=114 Identities=17% Similarity=0.218 Sum_probs=70.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
..-+|+|+|||+|..++.+. + + .| ...|+.-|.-.+--...-+.+ ...+-.|..+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA--------~-~----------~p---~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~ 91 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMA--------K-D----------RP---EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCH 91 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHH--------H-H----------CT---TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECS
T ss_pred CCCeEEEEeeeChHHHHHHH--------H-H----------CC---CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEEC
Confidence 45689999999999988776 2 1 22 346777777655433332222 1112234445
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
....+....+|++|+|.+++++...|-.+.. . +.++. . ..||+.-++-|+
T Consensus 92 Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~----~-------~rr~~----~---------------~~~l~~~~r~Lk 141 (218)
T 3dxy_A 92 DAVEVLHKMIPDNSLRMVQLFFPDPWHKARH----N-------KRRIV----Q---------------VPFAELVKSKLQ 141 (218)
T ss_dssp CHHHHHHHHSCTTCEEEEEEESCCCCCSGGG----G-------GGSSC----S---------------HHHHHHHHHHEE
T ss_pred CHHHHHHHHcCCCChheEEEeCCCCccchhh----h-------hhhhh----h---------------HHHHHHHHHHcC
Confidence 4333344458999999999999999932211 0 00010 0 136777788999
Q ss_pred cCceEEEEe
Q 017439 220 PGGLLLLLT 228 (371)
Q Consensus 220 pGG~lvl~~ 228 (371)
|||++++..
T Consensus 142 pGG~l~i~t 150 (218)
T 3dxy_A 142 LGGVFHMAT 150 (218)
T ss_dssp EEEEEEEEE
T ss_pred CCcEEEEEe
Confidence 999999877
No 116
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.85 E-value=5.3e-05 Score=71.35 Aligned_cols=100 Identities=11% Similarity=-0.008 Sum_probs=59.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..|+.+.. + -.+|...|+-.+--...=+.+... + +.+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~---------~---------------g~~V~gvD~S~~ml~~Ar~~~~~~---~---v~~ 94 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALE---------R---------------GASVTVFDFSQRMCDDLAEALADR---C---VTI 94 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHH---------T---------------TCEEEEEESCHHHHHHHHHHTSSS---C---CEE
T ss_pred CcCEEEEEeCcchHHHHHHHh---------c---------------CCEEEEEECCHHHHHHHHHHHHhc---c---cee
Confidence 457999999999999988772 1 013555555443322222222211 1 111
Q ss_pred Ccccc-----cCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 143 SFHGR-----LFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 143 SFy~r-----LfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+..- -.+++++|+++|+.++||+ +. +|....|+.-++-
T Consensus 95 ~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~---~~---------------------------------~~~~~~l~~l~~l 138 (261)
T 3iv6_A 95 DLLDITAEIPKELAGHFDFVLNDRLINRF---TT---------------------------------EEARRACLGMLSL 138 (261)
T ss_dssp EECCTTSCCCGGGTTCCSEEEEESCGGGS---CH---------------------------------HHHHHHHHHHHHH
T ss_pred eeeecccccccccCCCccEEEEhhhhHhC---CH---------------------------------HHHHHHHHHHHHh
Confidence 11110 0125789999999999985 21 2344456666677
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
| |||++++.+.
T Consensus 139 L-PGG~l~lS~~ 149 (261)
T 3iv6_A 139 V-GSGTVRASVK 149 (261)
T ss_dssp H-TTSEEEEEEE
T ss_pred C-cCcEEEEEec
Confidence 8 9999999874
No 117
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.81 E-value=3.3e-05 Score=75.19 Aligned_cols=99 Identities=18% Similarity=0.161 Sum_probs=63.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC-Ccceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL-SKKYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~-~~~~f~~ 138 (371)
..+|+|+|||+|..++.+. + . + .-+|+.-|+. . .-...+.. .- .+--|..
T Consensus 67 ~~~VLDvGcG~G~~~~~la--------~-~-----------g---~~~v~gvD~s-~-~l~~a~~~~~~~~~~~~v~~~~ 121 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAA--------K-A-----------G---ARKVIGIECS-S-ISDYAVKIVKANKLDHVVTIIK 121 (349)
T ss_dssp TCEEEEESCTTSHHHHHHH--------H-T-----------T---CSEEEEEECS-T-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEeccchHHHHHHH--------H-C-----------C---CCEEEEECcH-H-HHHHHHHHHHHcCCCCcEEEEE
Confidence 4689999999999888776 2 1 1 1267777776 3 22222221 11 1123444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. ..+--+|.+++|+++|....+++... .++..+|+.+.+-|
T Consensus 122 ~d---~~~~~~~~~~fD~Iis~~~~~~l~~~-----------------------------------~~~~~~l~~~~r~L 163 (349)
T 3q7e_A 122 GK---VEEVELPVEKVDIIISEWMGYCLFYE-----------------------------------SMLNTVLHARDKWL 163 (349)
T ss_dssp SC---TTTCCCSSSCEEEEEECCCBBTBTBT-----------------------------------CCHHHHHHHHHHHE
T ss_pred Cc---HHHccCCCCceEEEEEccccccccCc-----------------------------------hhHHHHHHHHHHhC
Confidence 43 22224678999999998766654332 23456899999999
Q ss_pred ccCceEE
Q 017439 219 VPGGLLL 225 (371)
Q Consensus 219 ~pGG~lv 225 (371)
+|||+|+
T Consensus 164 kpgG~li 170 (349)
T 3q7e_A 164 APDGLIF 170 (349)
T ss_dssp EEEEEEE
T ss_pred CCCCEEc
Confidence 9999997
No 118
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.80 E-value=0.00013 Score=63.72 Aligned_cols=110 Identities=14% Similarity=0.142 Sum_probs=62.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
..-+|+|+|||+|..++.+++ . + .-+|+..|+-..--...=+.+ .-.+--|..+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~-------~-------------~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 100 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALS-------R-------------G---AASVLFVESDQRSAAVIARNIEALGLSGATLRRG 100 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHH-------T-------------T---CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHH-------C-------------C---CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 346899999999999987662 1 0 114555555433222111111 0011123333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh--h
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ--E 217 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~--E 217 (371)
.-..+-. -++++++|+++++..+||. . .|+..+|+.-.+ -
T Consensus 101 d~~~~~~-~~~~~~fD~i~~~~p~~~~---~----------------------------------~~~~~~l~~~~~~~~ 142 (189)
T 3p9n_A 101 AVAAVVA-AGTTSPVDLVLADPPYNVD---S----------------------------------ADVDAILAALGTNGW 142 (189)
T ss_dssp CHHHHHH-HCCSSCCSEEEECCCTTSC---H----------------------------------HHHHHHHHHHHHSSS
T ss_pred cHHHHHh-hccCCCccEEEECCCCCcc---h----------------------------------hhHHHHHHHHHhcCc
Confidence 3111111 1357899999998887772 1 233445665555 8
Q ss_pred cccCceEEEEecCcCC
Q 017439 218 LVPGGLLLLLTPTIRD 233 (371)
Q Consensus 218 L~pGG~lvl~~~gr~~ 233 (371)
|+|||++++....+..
T Consensus 143 L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 143 TREGTVAVVERATTCA 158 (189)
T ss_dssp CCTTCEEEEEEETTSC
T ss_pred cCCCeEEEEEecCCCC
Confidence 9999999998876543
No 119
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.78 E-value=0.0001 Score=72.43 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=65.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-C---C-Cccee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-P---L-SKKYF 136 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-~---~-~~~~f 136 (371)
.+..+|+|+|||+|..++.+. + + + . -+|+..|.. +- -...+.. . - .+--|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la--------~-~----g-----~-----~~V~gvD~s-~~-~~~a~~~~~~~~~~~~v~~ 116 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSA--------Q-A----G-----A-----RKVYAVEAT-KM-ADHARALVKANNLDHIVEV 116 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHH--------H-T----T-----C-----SEEEEEESS-TT-HHHHHHHHHHTTCTTTEEE
T ss_pred CCCCEEEEeccCcCHHHHHHH--------h-c----C-----C-----CEEEEEccH-HH-HHHHHHHHHHcCCCCeEEE
Confidence 345799999999999888766 2 1 1 1 167888876 32 2222221 1 1 11234
Q ss_pred eeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 137 ATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 137 ~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
..+. ...+-+++++|+++|....|++... .++..+|+.+.+
T Consensus 117 ~~~d----~~~~~~~~~~D~Iv~~~~~~~l~~e-----------------------------------~~~~~~l~~~~~ 157 (376)
T 3r0q_C 117 IEGS----VEDISLPEKVDVIISEWMGYFLLRE-----------------------------------SMFDSVISARDR 157 (376)
T ss_dssp EESC----GGGCCCSSCEEEEEECCCBTTBTTT-----------------------------------CTHHHHHHHHHH
T ss_pred EECc----hhhcCcCCcceEEEEcChhhcccch-----------------------------------HHHHHHHHHHHh
Confidence 4443 2333333899999998777775431 245568999999
Q ss_pred hcccCceEEEEe
Q 017439 217 ELVPGGLLLLLT 228 (371)
Q Consensus 217 EL~pGG~lvl~~ 228 (371)
-|+|||+|++.-
T Consensus 158 ~LkpgG~li~~~ 169 (376)
T 3r0q_C 158 WLKPTGVMYPSH 169 (376)
T ss_dssp HEEEEEEEESSE
T ss_pred hCCCCeEEEEec
Confidence 999999997654
No 120
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.75 E-value=0.00014 Score=67.36 Aligned_cols=114 Identities=10% Similarity=-0.028 Sum_probs=60.0
Q ss_pred cceecccCCCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcc-cccccCCCCCceEEeeecCCCCcccHHHHHHHHHHHH
Q 017439 12 PEAYPMVGGDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLD-LKSLRLDTSSTFKIADLGCSTGPNTFIAMQNIIEAIE 90 (371)
Q Consensus 12 ~~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~-~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~ 90 (371)
++...++|. .|......|.+........ ++ +. .....+|+|+|||+|..|..+.
T Consensus 41 e~~~~~~~~----~yr~w~~~~skla~~ll~~--------l~~~~-----l~~g~~VLDlG~GtG~~t~~la-------- 95 (232)
T 3id6_C 41 ERLIKYEGV----EYREWNAFRSKLAGAILKG--------LKTNP-----IRKGTKVLYLGAASGTTISHVS-------- 95 (232)
T ss_dssp CCEEEETTE----EEEECCTTTCHHHHHHHTT--------CSCCS-----CCTTCEEEEETCTTSHHHHHHH--------
T ss_pred ceeeeecCc----chhhhchHHHHHHHHHHhh--------hhhcC-----CCCCCEEEEEeecCCHHHHHHH--------
Confidence 334445543 3877788888765533222 22 11 2335899999999999888776
Q ss_pred hhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-CCcceeeeccCCCcccccCCCCceeEEEecCCc
Q 017439 91 LIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-LSKKYFATGVPGSFHGRLFPESSLHVAHTSNAL 163 (371)
Q Consensus 91 ~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~al 163 (371)
+ ... | .-+|+..|+-...-..|.+... ..+-.++.+............+++|+++|..+.
T Consensus 96 ~-~v~---------~---~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 96 D-IIE---------L---NGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp H-HHT---------T---TSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred H-HhC---------C---CCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 2 111 1 1257777765542211111100 012234444433211111224689999998764
No 121
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.73 E-value=8.6e-05 Score=72.05 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=59.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-C---CC-Ccceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-V---PL-SKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l---~~-~~~~f~ 137 (371)
+.-+|+|+|||+|..++.+. + . + .-+|+..|... .-...+. + .- .+--+.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la--------~-~-----------g---~~~v~gvD~s~--~~~~a~~~~~~~~~~~~i~~~ 118 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAA--------K-A-----------G---AKKVLGVDQSE--ILYQAMDIIRLNKLEDTITLI 118 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-T-----------T---CSEEEEEESST--HHHHHHHHHHHTTCTTTEEEE
T ss_pred CCCEEEEeeccCcHHHHHHH--------H-c-----------C---CCEEEEEChHH--HHHHHHHHHHHcCCCCcEEEE
Confidence 34699999999999887665 2 1 0 12577777652 2222221 1 11 122233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. ..+--+|++++|+++|....+-+.. ..++..+|+.+.+-
T Consensus 119 ~~d---~~~~~~~~~~~D~Ivs~~~~~~l~~-----------------------------------~~~~~~~l~~~~~~ 160 (340)
T 2fyt_A 119 KGK---IEEVHLPVEKVDVIISEWMGYFLLF-----------------------------------ESMLDSVLYAKNKY 160 (340)
T ss_dssp ESC---TTTSCCSCSCEEEEEECCCBTTBTT-----------------------------------TCHHHHHHHHHHHH
T ss_pred Eee---HHHhcCCCCcEEEEEEcCchhhccC-----------------------------------HHHHHHHHHHHHhh
Confidence 333 2222367789999999752211111 13455689999999
Q ss_pred cccCceEE
Q 017439 218 LVPGGLLL 225 (371)
Q Consensus 218 L~pGG~lv 225 (371)
|+|||+++
T Consensus 161 LkpgG~li 168 (340)
T 2fyt_A 161 LAKGGSVY 168 (340)
T ss_dssp EEEEEEEE
T ss_pred cCCCcEEE
Confidence 99999998
No 122
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.72 E-value=7.6e-05 Score=67.80 Aligned_cols=107 Identities=13% Similarity=0.138 Sum_probs=62.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gv 140 (371)
...+|+|+|||+|..+..+. + . .+ . +|+..|+-.+-....=+... ..+--|..+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~--------~--~---------~~---~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d 116 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQ--------E--A---------PI---D-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL 116 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------T--S---------CE---E-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC
T ss_pred CCCeEEEEeccCCHHHHHHH--------h--c---------CC---C-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecC
Confidence 35799999999999887665 2 1 11 2 56666665443222211111 1112233333
Q ss_pred CCCcccc--cCCCCceeEEEe-cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGR--LFPESSLHVAHT-SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~r--LfP~~Svd~~~S-s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+.+- -+|++++|+|++ .+++++ .... ..++..+|+.-++-
T Consensus 117 ---~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~---------------------------------~~~~~~~l~~~~r~ 159 (236)
T 1zx0_A 117 ---WEDVAPTLPDGHFDGILYDTYPLSE-ETWH---------------------------------THQFNFIKNHAFRL 159 (236)
T ss_dssp ---HHHHGGGSCTTCEEEEEECCCCCBG-GGTT---------------------------------THHHHHHHHTHHHH
T ss_pred ---HHHhhcccCCCceEEEEECCcccch-hhhh---------------------------------hhhHHHHHHHHHHh
Confidence 2221 267899999999 666532 1111 13445578888889
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
|+|||+|++...
T Consensus 160 LkpgG~l~~~~~ 171 (236)
T 1zx0_A 160 LKPGGVLTYCNL 171 (236)
T ss_dssp EEEEEEEEECCH
T ss_pred cCCCeEEEEEec
Confidence 999999987653
No 123
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.70 E-value=0.00041 Score=63.88 Aligned_cols=98 Identities=26% Similarity=0.324 Sum_probs=59.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..+..+. + .+ | ..+++..|.-.+--...-+..+ +-.|..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~--------~-~~----------~---~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~d-- 138 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA--------D-AL----------P---EITTFGLDVSKVAIKAAAKRYP--QVTFCVAS-- 138 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH--------H-TC----------T---TSEEEEEESCHHHHHHHHHHCT--TSEEEECC--
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hC----------C---CCeEEEEeCCHHHHHHHHHhCC--CcEEEEcc--
Confidence 45799999999999998776 3 21 1 2256667765433222211111 11233333
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
+..--++++++|+++++.+ |. +|+.-.+-|+|||
T Consensus 139 -~~~~~~~~~~fD~v~~~~~-------~~--------------------------------------~l~~~~~~L~pgG 172 (269)
T 1p91_A 139 -SHRLPFSDTSMDAIIRIYA-------PC--------------------------------------KAEELARVVKPGG 172 (269)
T ss_dssp -TTSCSBCTTCEEEEEEESC-------CC--------------------------------------CHHHHHHHEEEEE
T ss_pred -hhhCCCCCCceeEEEEeCC-------hh--------------------------------------hHHHHHHhcCCCc
Confidence 2222257889999998654 21 2444456799999
Q ss_pred eEEEEecCcC
Q 017439 223 LLLLLTPTIR 232 (371)
Q Consensus 223 ~lvl~~~gr~ 232 (371)
++++..++.+
T Consensus 173 ~l~~~~~~~~ 182 (269)
T 1p91_A 173 WVITATPGPR 182 (269)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEcCHH
Confidence 9999987654
No 124
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.68 E-value=0.0003 Score=63.14 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=61.7
Q ss_pred CceEEeeecCC-CCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeec
Q 017439 63 STFKIADLGCS-TGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs-~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~g 139 (371)
...+|+|+||| +|..++.+.... ..+|+..|.-..-....=+.+.. .+--+..+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~ 111 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-----------------------NCKVTATEVDEEFFEYARRNIERNNSNVRLVKS 111 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-----------------------CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-----------------------CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeC
Confidence 45799999999 999998776321 01344444433221111111100 01122222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.... .. -+|++++|+++++-.+||..... +.+. ..++..+ .. ...+...||+.-.+-|+
T Consensus 112 d~~~-~~-~~~~~~fD~I~~npp~~~~~~~~--~~~~-~~~~~~~-----~~-----------~~~~~~~~l~~~~~~Lk 170 (230)
T 3evz_A 112 NGGI-IK-GVVEGTFDVIFSAPPYYDKPLGR--VLTE-REAIGGG-----KY-----------GEEFSVKLLEEAFDHLN 170 (230)
T ss_dssp SSCS-ST-TTCCSCEEEEEECCCCC------------------CC-----SS-----------SCHHHHHHHHHHGGGEE
T ss_pred Cchh-hh-hcccCceeEEEECCCCcCCcccc--ccCh-hhhhccC-----cc-----------chHHHHHHHHHHHHHhC
Confidence 2111 11 23568999999998888855411 1110 0001000 00 01234568888889999
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++.+..
T Consensus 171 pgG~l~~~~~~ 181 (230)
T 3evz_A 171 PGGKVALYLPD 181 (230)
T ss_dssp EEEEEEEEEES
T ss_pred CCeEEEEEecc
Confidence 99999998643
No 125
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.60 E-value=0.00024 Score=68.39 Aligned_cols=99 Identities=22% Similarity=0.276 Sum_probs=59.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC-Ccceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL-SKKYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~-~~~~f~~ 138 (371)
..+|+|+|||+|..++.+. + . + .-+|+..|.. . .-...+.. .- .+--+..
T Consensus 39 ~~~VLDiGcGtG~ls~~la--------~-~-----------g---~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~ 93 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAA--------K-H-----------G---AKHVIGVDMS-S-IIEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------H-T-----------C---CSEEEEEESS-T-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEecCccHHHHHHHH--------H-C-----------C---CCEEEEEChH-H-HHHHHHHHHHHcCCCCCEEEEE
Confidence 3599999999999887665 2 1 1 1257777775 2 22222221 11 1122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+. +-+--+|.+++|+++|....+.+.. ..++..+|+.+.+-|
T Consensus 94 ~d---~~~~~~~~~~~D~Ivs~~~~~~l~~-----------------------------------~~~~~~~l~~~~~~L 135 (328)
T 1g6q_1 94 GK---LEDVHLPFPKVDIIISEWMGYFLLY-----------------------------------ESMMDTVLYARDHYL 135 (328)
T ss_dssp SC---TTTSCCSSSCEEEEEECCCBTTBST-----------------------------------TCCHHHHHHHHHHHE
T ss_pred Cc---hhhccCCCCcccEEEEeCchhhccc-----------------------------------HHHHHHHHHHHHhhc
Confidence 33 2222357789999999754443221 123455888999999
Q ss_pred ccCceEE
Q 017439 219 VPGGLLL 225 (371)
Q Consensus 219 ~pGG~lv 225 (371)
+|||+++
T Consensus 136 kpgG~li 142 (328)
T 1g6q_1 136 VEGGLIF 142 (328)
T ss_dssp EEEEEEE
T ss_pred CCCeEEE
Confidence 9999997
No 126
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.57 E-value=0.00011 Score=64.47 Aligned_cols=112 Identities=13% Similarity=0.156 Sum_probs=63.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC----Ccceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL----SKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~----~~~~f~~g 139 (371)
..+|+|+|||+|..++.+. + ++. | .-+++..|+-..-....=+.+.. .+--|..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~--------~-~~~---------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 81 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLA--------S-LVG---------E---NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD 81 (197)
T ss_dssp TCEEEESCCTTSHHHHHHH--------H-HHC---------T---TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS
T ss_pred CCEEEEcCCCCCHHHHHHH--------H-HhC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 4699999999999888777 2 221 1 12566777654433222222111 11223333
Q ss_pred cCCCccccc--CCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 140 VPGSFHGRL--FPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 140 vpgSFy~rL--fP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. + ..+ ++++++|+++++..+ .|.. + +.+. .. .+|...+|+.-.+-
T Consensus 82 d---~-~~~~~~~~~~fD~v~~~~~~-----~~~~--~--------~~~~---~~-----------~~~~~~~l~~~~~~ 128 (197)
T 3eey_A 82 G---H-QNMDKYIDCPVKAVMFNLGY-----LPSG--D--------HSIS---TR-----------PETTIQALSKAMEL 128 (197)
T ss_dssp C---G-GGGGGTCCSCEEEEEEEESB-----CTTS--C--------TTCB---CC-----------HHHHHHHHHHHHHH
T ss_pred C---H-HHHhhhccCCceEEEEcCCc-----ccCc--c--------cccc---cC-----------cccHHHHHHHHHHh
Confidence 3 2 222 466899999998666 2211 0 0000 00 12444578888889
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
|+|||++++...
T Consensus 129 Lk~gG~l~~~~~ 140 (197)
T 3eey_A 129 LVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEEEEEEC
T ss_pred CcCCCEEEEEEc
Confidence 999999998874
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.57 E-value=0.00045 Score=62.93 Aligned_cols=153 Identities=13% Similarity=0.074 Sum_probs=80.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhh---hc-C---CCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLF---KS-V---PLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF---~~-l---~~~~~~ 135 (371)
..-+|+|+|||+|..++.+. + + .| ..+|+--|+-....-... +. . ...+-.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la--------~-~----------~~---~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~ 81 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLA--------I-N----------DQ---NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVV 81 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHH--------H-T----------CT---TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEE
T ss_pred CCCEEEEEeccCcHHHHHHH--------H-h----------CC---CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 35799999999999888766 2 1 22 457888888744431111 11 1 111223
Q ss_pred eeeccCCCcccccCCC---CceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 136 FATGVPGSFHGRLFPE---SSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~---~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
|..+... .+ |. +.+|.++++.. | |.. ...-..|...+|+
T Consensus 82 ~~~~d~~----~l-~~~~~d~v~~i~~~~~--~----~~~---------------------------~~~~~~~~~~~l~ 123 (225)
T 3p2e_A 82 FVIAAAE----SL-PFELKNIADSISILFP--W----GTL---------------------------LEYVIKPNRDILS 123 (225)
T ss_dssp EECCBTT----BC-CGGGTTCEEEEEEESC--C----HHH---------------------------HHHHHTTCHHHHH
T ss_pred EEEcCHH----Hh-hhhccCeEEEEEEeCC--C----cHH---------------------------hhhhhcchHHHHH
Confidence 4444422 22 32 55666665543 3 110 0011123345788
Q ss_pred HHHhhcccCceEEEEecCcCCCCCCCCCCCcchHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhcCCce
Q 017439 213 ARAQELVPGGLLLLLTPTIRDGIPMFSTPEGTNFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKRNKNF 292 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~~g~F 292 (371)
.-++-|||||++++.+........ +...+. +.- ...|.|++ .+|+++.+++.| |
T Consensus 124 ~~~r~LkpGG~l~i~~~~~~~~~~------------~~~~~~-----~~~-------~~~~~~~~-~~el~~~l~~aG-f 177 (225)
T 3p2e_A 124 NVADLAKKEAHFEFVTTYSDSYEE------------AEIKKR-----GLP-------LLSKAYFL-SEQYKAELSNSG-F 177 (225)
T ss_dssp HHHTTEEEEEEEEEEECCCC--------------------------------------CCHHHHH-SHHHHHHHHHHT-C
T ss_pred HHHHhcCCCcEEEEEEeccccchh------------chhhhc-----CCC-------CCChhhcc-hHHHHHHHHHcC-C
Confidence 888999999999995532221100 000000 100 01123333 246999999877 9
Q ss_pred EEEEEEEee
Q 017439 293 SIEIMNTFT 301 (371)
Q Consensus 293 ~I~~~e~~~ 301 (371)
+|...+.+.
T Consensus 178 ~v~~~~~~~ 186 (225)
T 3p2e_A 178 RIDDVKELD 186 (225)
T ss_dssp EEEEEEEEC
T ss_pred CeeeeeecC
Confidence 999999885
No 128
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.55 E-value=0.00025 Score=61.83 Aligned_cols=117 Identities=17% Similarity=0.129 Sum_probs=66.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccC-CCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDC-ECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~-~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
..+|+|+|||+|..|+.+. + ++...+ +.. .| .-+|+..|+...- .++ +--+. ..+
T Consensus 23 ~~~vLDlGcG~G~~~~~la--------~-~~~~~~~~~~--~~---~~~v~~vD~s~~~------~~~--~~~~~--~~~ 78 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAV--------Q-KVNAAGTDPS--SP---VGFVLGVDLLHIF------PLE--GATFL--CPA 78 (196)
T ss_dssp TCEEEEETCCSCHHHHHHH--------H-HTTTTCCCTT--SC---CCEEEEECSSCCC------CCT--TCEEE--CSC
T ss_pred CCEEEEeCCCCCHHHHHHH--------H-Hhcccccccc--CC---CceEEEEechhcc------cCC--CCeEE--Eec
Confidence 4799999999999998777 3 221100 000 22 2468888876521 011 11222 012
Q ss_pred Cccc--------ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 143 SFHG--------RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 143 SFy~--------rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
.+.. ..+|.+++|+++|..++||.-.. ..+ + ....+....+|+.-
T Consensus 79 d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~---~~~-----------------~-------~~~~~~~~~~l~~~ 131 (196)
T 2nyu_A 79 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFR---DLD-----------------H-------DRLISLCLTLLSVT 131 (196)
T ss_dssp CTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCH---HHH-----------------H-------HHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCc---ccC-----------------H-------HHHHHHHHHHHHHH
Confidence 2222 12567899999998877763210 001 0 00112334677777
Q ss_pred HhhcccCceEEEEecCc
Q 017439 215 AQELVPGGLLLLLTPTI 231 (371)
Q Consensus 215 a~EL~pGG~lvl~~~gr 231 (371)
.+-|+|||+|++.....
T Consensus 132 ~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 132 PDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHEEEEEEEEEEECCS
T ss_pred HHHhcCCCEEEEEecCC
Confidence 88999999999987543
No 129
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.55 E-value=0.0004 Score=69.69 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..++.+.
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA 192 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVA 192 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 45789999999999998876
No 130
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.54 E-value=0.00036 Score=69.70 Aligned_cols=132 Identities=13% Similarity=0.128 Sum_probs=77.5
Q ss_pred CCceEEeeecCC------CCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcce
Q 017439 62 SSTFKIADLGCS------TGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKY 135 (371)
Q Consensus 62 ~~~~~IaDlGCs------~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~ 135 (371)
.++.+|+|+||| +|..|+.++ + ++ .| .-+|+.-|+-.+. .+ ...+--
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la--------~-~~---------fP---~a~V~GVDiSp~m---~~---~~~rI~ 267 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMW--------K-SF---------FP---RGQIYGLDIMDKS---HV---DELRIR 267 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHH--------H-HH---------CT---TCEEEEEESSCCG---GG---CBTTEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHH--------H-Hh---------CC---CCEEEEEECCHHH---hh---cCCCcE
Confidence 356899999999 788888776 3 32 12 3368888886664 11 112234
Q ss_pred eeeccCCC--cccccC-CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 136 FATGVPGS--FHGRLF-PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 136 f~~gvpgS--Fy~rLf-P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
|..|.-.+ |-.++. +++++|+|+|..+ ||. .|+..+|+
T Consensus 268 fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~--------------------------------------~d~~~aL~ 308 (419)
T 3sso_A 268 TIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HIN--------------------------------------AHVRTSFA 308 (419)
T ss_dssp EEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCH--------------------------------------HHHHHHHH
T ss_pred EEEecccccchhhhhhcccCCccEEEECCc-ccc--------------------------------------hhHHHHHH
Confidence 55555322 111111 1689999999865 551 13344677
Q ss_pred HHHhhcccCceEEEEecCcCCC---C-CCC-CCCCcchHHHHHHHHHHHHHc
Q 017439 213 ARAQELVPGGLLLLLTPTIRDG---I-PMF-STPEGTNFDYLGSCLYDLANM 259 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~~gr~~~---~-~~~-~~~~~~~~~~l~~al~~mv~e 259 (371)
.-.+-|||||++++.-+-..-. . ... ......+.+.++..+..+-.+
T Consensus 309 el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 309 ALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp HHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGG
T ss_pred HHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccc
Confidence 7789999999999975442111 0 000 012233667777777665443
No 131
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.54 E-value=0.00018 Score=70.89 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=61.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---C--cce-ee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---S--KKY-FA 137 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~--~~~-f~ 137 (371)
..+|+|+|||+|..++.+. + + .| ..+|+..|.-..--...=+.+.. . .++ |.
T Consensus 223 ~~~VLDlGcG~G~~s~~la--------~-~----------~p---~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~ 280 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLL--------D-K----------NP---QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 280 (375)
T ss_dssp CSEEEEETCTTCHHHHHHH--------H-H----------CT---TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEE
T ss_pred CCeEEEEeCcchHHHHHHH--------H-H----------CC---CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEE
Confidence 3799999999999998877 2 1 12 23577777643221111111110 0 012 33
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.. -+|++++|+|+|+-.+|+...++.. ....||+.-.+-
T Consensus 281 ~~D---~~~-~~~~~~fD~Ii~nppfh~~~~~~~~---------------------------------~~~~~l~~~~~~ 323 (375)
T 4dcm_A 281 INN---ALS-GVEPFRFNAVLCNPPFHQQHALTDN---------------------------------VAWEMFHHARRC 323 (375)
T ss_dssp ECS---TTT-TCCTTCEEEEEECCCC-------CC---------------------------------HHHHHHHHHHHH
T ss_pred ech---hhc-cCCCCCeeEEEECCCcccCcccCHH---------------------------------HHHHHHHHHHHh
Confidence 332 333 4578899999999999985444321 112477777888
Q ss_pred cccCceEEEEe
Q 017439 218 LVPGGLLLLLT 228 (371)
Q Consensus 218 L~pGG~lvl~~ 228 (371)
|+|||+++++.
T Consensus 324 LkpgG~l~iv~ 334 (375)
T 4dcm_A 324 LKINGELYIVA 334 (375)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99999999975
No 132
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.52 E-value=0.00039 Score=63.32 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la 89 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIK 89 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH
Confidence 45799999999999998877
No 133
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.47 E-value=0.00031 Score=69.52 Aligned_cols=20 Identities=50% Similarity=0.657 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhhcccCceEE
Q 017439 206 DIESFLNARAQELVPGGLLL 225 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lv 225 (371)
.+..+|.+|.+-|+|||+|+
T Consensus 167 ~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 167 MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SHHHHHHHHHHHEEEEEEEE
T ss_pred hhhhHHHHHHhhCCCCceEC
Confidence 45668999999999999987
No 134
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.45 E-value=0.00023 Score=64.16 Aligned_cols=19 Identities=21% Similarity=0.502 Sum_probs=16.5
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..+..+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~ 67 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFG 67 (226)
T ss_dssp TCEEEEESCTTSHHHHHHG
T ss_pred CCeEEEeCCCCCHHHHHHH
Confidence 4699999999999887766
No 135
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.45 E-value=0.00018 Score=66.10 Aligned_cols=115 Identities=15% Similarity=0.100 Sum_probs=62.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh---hhhcC-----CC-C
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT---LFKSV-----PL-S 132 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~---lF~~l-----~~-~ 132 (371)
.+..+|+|+|||+|..++.+. + + .| ...|+.-|.-..--.. ..+.+ .. .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~-~----------~p---~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~ 102 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELS--------P-L----------FP---DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ 102 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHG--------G-G----------ST---TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT
T ss_pred CCCCeEEEEccCCcHHHHHHH--------H-H----------CC---CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 346789999999999988766 2 1 12 3355666654322110 00100 01 1
Q ss_pred cceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHH
Q 017439 133 KKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLN 212 (371)
Q Consensus 133 ~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~ 212 (371)
+--|+.+.-..+....||++++|.+++++.-.|..+.- .|.++ ....||+
T Consensus 103 nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h-----------~krr~-------------------~~~~~l~ 152 (235)
T 3ckk_A 103 NIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTK-----------HKWRI-------------------ISPTLLA 152 (235)
T ss_dssp TEEEEECCTTTCHHHHCCTTCEEEEEEESCC----------------------C-------------------CCHHHHH
T ss_pred eEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhh-----------hhhhh-------------------hhHHHHH
Confidence 11244444333334457899999999988777733210 00000 0124677
Q ss_pred HHHhhcccCceEEEEe
Q 017439 213 ARAQELVPGGLLLLLT 228 (371)
Q Consensus 213 ~Ra~EL~pGG~lvl~~ 228 (371)
.-++-|+|||++++.+
T Consensus 153 ~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 153 EYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHCCCCCEEEEEe
Confidence 7788999999999886
No 136
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.44 E-value=3.8e-05 Score=74.44 Aligned_cols=105 Identities=11% Similarity=0.145 Sum_probs=65.4
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeeccCC
Q 017439 65 FKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATGVPG 142 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~gvpg 142 (371)
-+|+|+|||+|..++.+. + + .| ..+|+..|....--...=+.+. .....+..+
T Consensus 198 ~~VLDlGcG~G~~~~~la--------~-~----------~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~--- 252 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFA--------R-H----------SP---KIRLTLCDVSAPAVEASRATLAANGVEGEVFAS--- 252 (343)
T ss_dssp SBCCBTTCTTSHHHHHHH--------H-H----------CT---TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEEC---
T ss_pred CeEEEecCccCHHHHHHH--------H-H----------CC---CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEc---
Confidence 489999999999998776 2 1 12 2356666664432111111111 011122222
Q ss_pred CcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGG 222 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 222 (371)
.+.. ++++++|+++|+..+||.... ...+...||+.-.+-|+|||
T Consensus 253 d~~~--~~~~~fD~Iv~~~~~~~g~~~---------------------------------~~~~~~~~l~~~~~~LkpgG 297 (343)
T 2pjd_A 253 NVFS--EVKGRFDMIISNPPFHDGMQT---------------------------------SLDAAQTLIRGAVRHLNSGG 297 (343)
T ss_dssp STTT--TCCSCEEEEEECCCCCSSSHH---------------------------------HHHHHHHHHHHHGGGEEEEE
T ss_pred cccc--cccCCeeEEEECCCcccCccC---------------------------------CHHHHHHHHHHHHHhCCCCc
Confidence 3333 247899999999999983211 12456678999999999999
Q ss_pred eEEEEec
Q 017439 223 LLLLLTP 229 (371)
Q Consensus 223 ~lvl~~~ 229 (371)
+++++..
T Consensus 298 ~l~i~~~ 304 (343)
T 2pjd_A 298 ELRIVAN 304 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999763
No 137
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.43 E-value=0.00058 Score=61.47 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la 76 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA 76 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEECCcCCHHHHHHH
Confidence 34699999999999888766
No 138
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.42 E-value=0.00022 Score=62.95 Aligned_cols=102 Identities=12% Similarity=0.105 Sum_probs=59.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..++.+.. . .| ..+++..|.-..--...=+.+ ...+--+..+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~---------~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASN---------L----------MP---NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHH---------H----------CT---TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHH---------H----------CC---CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 457999999999999887772 1 11 225666665443222111111 1111112222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+.+.+.+..++|++++..+++ |...+|+.-.+-|+
T Consensus 98 ---d~~~~~~~~~~~D~i~~~~~~~-----------------------------------------~~~~~l~~~~~~Lk 133 (204)
T 3e05_A 98 ---FAPEGLDDLPDPDRVFIGGSGG-----------------------------------------MLEEIIDAVDRRLK 133 (204)
T ss_dssp ---CTTTTCTTSCCCSEEEESCCTT-----------------------------------------CHHHHHHHHHHHCC
T ss_pred ---ChhhhhhcCCCCCEEEECCCCc-----------------------------------------CHHHHHHHHHHhcC
Confidence 2233333346789998877654 12236777778899
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++....
T Consensus 134 pgG~l~~~~~~ 144 (204)
T 3e05_A 134 SEGVIVLNAVT 144 (204)
T ss_dssp TTCEEEEEECB
T ss_pred CCeEEEEEecc
Confidence 99999997644
No 139
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.42 E-value=0.00022 Score=67.45 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=31.5
Q ss_pred CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcccCceEEE
Q 017439 151 ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVPGGLLLL 226 (371)
Q Consensus 151 ~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lvl 226 (371)
.+++|+|+|.+.|+|+.. + +....|+.-++-|+|||.|++
T Consensus 211 ~~~fDlI~crnvliyf~~-~-----------------------------------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDK-T-----------------------------------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCH-H-----------------------------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCH-H-----------------------------------HHHHHHHHHHHHhCCCcEEEE
Confidence 578999999999999642 1 123467777899999999987
No 140
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.42 E-value=0.00014 Score=67.46 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 121 ~~~VLDiGcG~G~l~~~la 139 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAE 139 (254)
T ss_dssp TCEEEEETCTTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4689999999999887655
No 141
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.41 E-value=0.00021 Score=64.27 Aligned_cols=21 Identities=19% Similarity=0.291 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...+|+|+|||+|..+..+..
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~ 90 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAE 90 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHH
Confidence 346999999999999988763
No 142
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.40 E-value=0.00013 Score=64.82 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=44.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..+..+.. .. .| ..+++..|.-.+--...=+.+ ...+--|..+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~---------~~---------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 135 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAE---------IV---------GE---DGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG 135 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHH---------HH---------CT---TSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES
T ss_pred CCCEEEEECCCccHHHHHHHH---------Hh---------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 346999999999999987762 11 01 124666665433222111111 1111122222
Q ss_pred cCCCcccccCCCCceeEEEecCCcccc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWL 166 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWL 166 (371)
.+...+.+.+++|+++++.++|++
T Consensus 136 ---d~~~~~~~~~~fD~v~~~~~~~~~ 159 (215)
T 2yxe_A 136 ---DGTLGYEPLAPYDRIYTTAAGPKI 159 (215)
T ss_dssp ---CGGGCCGGGCCEEEEEESSBBSSC
T ss_pred ---CcccCCCCCCCeeEEEECCchHHH
Confidence 222222236789999999999984
No 143
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.37 E-value=0.00042 Score=59.52 Aligned_cols=20 Identities=30% Similarity=0.399 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 33 ~~~~vldiG~G~G~~~~~l~ 52 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELA 52 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 34699999999999988776
No 144
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.35 E-value=0.00061 Score=62.85 Aligned_cols=123 Identities=13% Similarity=0.077 Sum_probs=65.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~-~~~f~~ 138 (371)
...+|+|+|||+|..++.+. + + .+ . +|+..|+-..-....=+.+ +-. +-.+..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la--------~-~----------~~---~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~ 105 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS--------T-R----------TK---A-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIE 105 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH--------T-T----------CC---C-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHH--------H-h----------cC---C-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEE
Confidence 45799999999999888766 2 1 11 2 5677776544332222221 111 122333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHH-HHHHHhhHHHHHHHHHhh
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAY-SAQFKNDIESFLNARAQE 217 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay-~~Q~~~D~~~FL~~Ra~E 217 (371)
+.-..+- .-+|++++|+|+|+-.++..+.. .+.+ +....+. ......++..||+.-++-
T Consensus 106 ~D~~~~~-~~~~~~~fD~Ii~npPy~~~~~~--~~~~-----------------~~~~~~~a~~~~~~~~~~~l~~~~~~ 165 (259)
T 3lpm_A 106 YDLKKIT-DLIPKERADIVTCNPPYFATPDT--SLKN-----------------TNEHFRIARHEVMCTLEDTIRVAASL 165 (259)
T ss_dssp SCGGGGG-GTSCTTCEEEEEECCCC------------------------------------------HHHHHHHHHHHHH
T ss_pred CcHHHhh-hhhccCCccEEEECCCCCCCccc--cCCC-----------------CchHHHhhhccccCCHHHHHHHHHHH
Confidence 3322221 22568999999998665543110 0000 0000000 111235778899999999
Q ss_pred cccCceEEEEe
Q 017439 218 LVPGGLLLLLT 228 (371)
Q Consensus 218 L~pGG~lvl~~ 228 (371)
|+|||++++..
T Consensus 166 LkpgG~l~~~~ 176 (259)
T 3lpm_A 166 LKQGGKANFVH 176 (259)
T ss_dssp EEEEEEEEEEE
T ss_pred ccCCcEEEEEE
Confidence 99999999965
No 145
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.35 E-value=0.00048 Score=62.42 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=16.8
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..+..+.
T Consensus 92 ~~~vLdiG~G~G~~~~~la 110 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALIS 110 (235)
T ss_dssp TCCEEEECCTTSHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHH
Confidence 4689999999999998776
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.34 E-value=0.00061 Score=63.25 Aligned_cols=124 Identities=16% Similarity=0.162 Sum_probs=64.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC------C-cce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL------S-KKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~------~-~~~ 135 (371)
...+|+|+|||+|..++.+.+. .| ..+|+..|+-..-....=+.+.. . +-.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~-------------------~~---~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~ 93 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAAR-------------------LE---KAEVTLYERSQEMAEFARRSLELPDNAAFSARIE 93 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHH-------------------CT---TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEE
T ss_pred CCCEEEEeCChHhHHHHHHHHh-------------------CC---CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEE
Confidence 4579999999999998877631 11 23455555533221111111111 0 112
Q ss_pred eeeccCCCccc----ccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHH-HHHhhHHHH
Q 017439 136 FATGVPGSFHG----RLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSA-QFKNDIESF 210 (371)
Q Consensus 136 f~~gvpgSFy~----rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~-Q~~~D~~~F 210 (371)
+..+.-..+.. ..+|++++|+|+|+-..++... ... +...++.+. ....++..|
T Consensus 94 ~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~----~~~-----------------~~~~~~~a~~~~~~~~~~~ 152 (260)
T 2ozv_A 94 VLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGD----RRT-----------------PDALKAEAHAMTEGLFEDW 152 (260)
T ss_dssp EEECCTTCCHHHHHHTTCCTTCEEEEEECCCC------------------------------------------CCHHHH
T ss_pred EEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCC----CCC-----------------cCHHHHHHhhcCcCCHHHH
Confidence 33333222211 2367889999999966665321 000 011111111 112457889
Q ss_pred HHHHHhhcccCceEEEEec
Q 017439 211 LNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 211 L~~Ra~EL~pGG~lvl~~~ 229 (371)
|+.-++-|+|||++++...
T Consensus 153 l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 153 IRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEEEEc
Confidence 9999999999999999764
No 147
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.34 E-value=0.00088 Score=61.28 Aligned_cols=23 Identities=13% Similarity=0.245 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHhhcccCceEEEE
Q 017439 205 NDIESFLNARAQELVPGGLLLLL 227 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~ 227 (371)
.+...||+.-++-|+|||+++++
T Consensus 191 ~~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 191 QPVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cHHHHHHHHHHHhcCCCcEEEEe
Confidence 44556788778889999999984
No 148
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.33 E-value=0.00068 Score=61.95 Aligned_cols=24 Identities=25% Similarity=0.355 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHhhcccCceEEEEe
Q 017439 205 NDIESFLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~ 228 (371)
.|...||+.-++-|||||+|++..
T Consensus 147 ~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 147 HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cchhhhhhhhhheeCCCCEEEEEe
Confidence 456668888889999999997643
No 149
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.33 E-value=8.6e-05 Score=67.13 Aligned_cols=81 Identities=17% Similarity=0.159 Sum_probs=48.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhh---hcCCCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLF---KSVPLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF---~~l~~~~~~f~~g 139 (371)
.+-+|+|+|||+|+.++.++ . . .| ..++...|.-..-=.-.= ..+....++-+..
T Consensus 49 ~~~~VLDlGCG~GplAl~l~--------~--~---------~p---~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d 106 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQW--------N--E---------NE---KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLN 106 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHH--------C--S---------SC---CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHH--------h--c---------CC---CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEec
Confidence 36799999999999999887 2 1 33 336666665442211110 0011111222211
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCC
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIP 170 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP 170 (371)
+....|+.++|++.++..||-|.+.+
T Consensus 107 -----~~~~~~~~~~DvVLa~k~LHlL~~~~ 132 (200)
T 3fzg_A 107 -----KESDVYKGTYDVVFLLKMLPVLKQQD 132 (200)
T ss_dssp -----CHHHHTTSEEEEEEEETCHHHHHHTT
T ss_pred -----ccccCCCCCcChhhHhhHHHhhhhhH
Confidence 12235889999999999999985444
No 150
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.31 E-value=0.00046 Score=61.35 Aligned_cols=18 Identities=22% Similarity=0.113 Sum_probs=16.2
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
.+|+|+|||+|..++.++
T Consensus 55 ~~vLDlGcGtG~~~~~~~ 72 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEAL 72 (201)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEcCCccCHHHHHHH
Confidence 589999999999998766
No 151
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.31 E-value=0.00015 Score=63.58 Aligned_cols=128 Identities=13% Similarity=0.055 Sum_probs=59.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~g 139 (371)
....+|+|+|||+|..++.+. + + .| ..+++..|+-..--...=+.+... +--|..+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIA--------L-A----------CP---GVSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHH--------H-H----------CT---TEEEEEEECC-------------------CCHH
T ss_pred CCCCEEEEecCCHhHHHHHHH--------H-h----------CC---CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 456899999999999888777 2 1 11 235666665433222111111110 1112222
Q ss_pred cCCCcccccCCC-----CceeEEEecCCccccCCCC---ccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHH
Q 017439 140 VPGSFHGRLFPE-----SSLHVAHTSNALPWLSKIP---KEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFL 211 (371)
Q Consensus 140 vpgSFy~rLfP~-----~Svd~~~Ss~alHWLS~vP---~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL 211 (371)
.+.+ .+++ +++|+++++-.+|+..... ..+... ... ..... .....+.+..||
T Consensus 87 ---d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~-----~~~-~~~~~---------~~~~~~~~~~~l 147 (215)
T 4dzr_A 87 ---DGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDY-----EPR-LALDG---------GEDGLQFYRRMA 147 (215)
T ss_dssp ---HHHH-HHHHHHHTTCCBSEEEECCCCCC---------------------------------------CTTHHHHHHH
T ss_pred ---chHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhcc-----Ccc-ccccC---------CCcHHHHHHHHH
Confidence 2233 4454 8999999987776644321 111100 000 00000 001123346788
Q ss_pred HHHHhhcccCceEEEEecC
Q 017439 212 NARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 212 ~~Ra~EL~pGG~lvl~~~g 230 (371)
+.-.+-|+|||++++...+
T Consensus 148 ~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 148 ALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp TCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHhcCCCeEEEEEEC
Confidence 8888999999995444433
No 152
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.29 E-value=0.00066 Score=65.66 Aligned_cols=113 Identities=16% Similarity=0.139 Sum_probs=68.4
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC--C-CCcceee
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV--P-LSKKYFA 137 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l--~-~~~~~f~ 137 (371)
.+++.+|+|+|||+|..+..+.. ++ | ..++..-|+-..--...=+.+ + ..+--+.
T Consensus 87 ~p~~~rVLdIG~G~G~la~~la~---------~~----------p---~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~ 144 (317)
T 3gjy_A 87 DASKLRITHLGGGACTMARYFAD---------VY----------P---QSRNTVVELDAELARLSREWFDIPRAPRVKIR 144 (317)
T ss_dssp CGGGCEEEEESCGGGHHHHHHHH---------HS----------T---TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEE
T ss_pred CCCCCEEEEEECCcCHHHHHHHH---------HC----------C---CcEEEEEECCHHHHHHHHHhccccCCCceEEE
Confidence 34578999999999988887772 11 1 224445554332111111111 1 1223355
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+....|-.+ ++++++|+|++....|| ..|..+.. ..|++.-.+-
T Consensus 145 ~~Da~~~l~~-~~~~~fDvIi~D~~~~~--~~~~~L~t--------------------------------~efl~~~~r~ 189 (317)
T 3gjy_A 145 VDDARMVAES-FTPASRDVIIRDVFAGA--ITPQNFTT--------------------------------VEFFEHCHRG 189 (317)
T ss_dssp ESCHHHHHHT-CCTTCEEEEEECCSTTS--CCCGGGSB--------------------------------HHHHHHHHHH
T ss_pred ECcHHHHHhh-ccCCCCCEEEECCCCcc--ccchhhhH--------------------------------HHHHHHHHHh
Confidence 5555554433 36789999999887776 23433321 2378888899
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|+|||+|++....
T Consensus 190 LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 190 LAPGGLYVANCGD 202 (317)
T ss_dssp EEEEEEEEEEEEE
T ss_pred cCCCcEEEEEecC
Confidence 9999999998853
No 153
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.28 E-value=0.00067 Score=64.67 Aligned_cols=110 Identities=11% Similarity=0.061 Sum_probs=64.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC--------CCCc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV--------PLSK 133 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l--------~~~~ 133 (371)
+++-+|+|+|||+|..+..++ + . .| .-+|...|+-..--...=+.+ ...+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~r 139 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVT--------R--H---------KN---VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPR 139 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------T--C---------TT---CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTT
T ss_pred CCCCEEEEEeCChhHHHHHHH--------h--C---------CC---CCEEEEEECCHHHHHHHHHhhhhcccccccCCc
Confidence 346799999999999888776 2 1 12 236777777554322221111 1223
Q ss_pred ceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 134 KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 134 ~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
--+..|....|... +++++|+|++...-+| .|..- . .-..|++.
T Consensus 140 v~~~~~D~~~~l~~--~~~~fDvIi~D~~~p~---~~~~~------------l-------------------~~~~f~~~ 183 (294)
T 3adn_A 140 FKLVIDDGVNFVNQ--TSQTFDVIISDCTDPI---GPGES------------L-------------------FTSAFYEG 183 (294)
T ss_dssp CCEECSCSCC---C--CCCCEEEEEECC--------------------------------------------CCHHHHHH
T ss_pred eEEEEChHHHHHhh--cCCCccEEEECCCCcc---Ccchh------------c-------------------cHHHHHHH
Confidence 34666766666544 6789999999766555 22100 0 00347788
Q ss_pred HHhhcccCceEEEEec
Q 017439 214 RAQELVPGGLLLLLTP 229 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~~ 229 (371)
-.+-|+|||+|++...
T Consensus 184 ~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 184 CKRCLNPGGIFVAQNG 199 (294)
T ss_dssp HHHTEEEEEEEEEEEE
T ss_pred HHHhcCCCCEEEEecC
Confidence 8899999999999863
No 154
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.26 E-value=0.00076 Score=64.29 Aligned_cols=109 Identities=13% Similarity=0.088 Sum_probs=59.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-------CCCcc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-------PLSKK 134 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-------~~~~~ 134 (371)
+++.+|+|+|||+|..+..++ + . .| ..+|...|+-..-....=+.+ ...+-
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v 151 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL--------R--H---------GT---VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA 151 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE
T ss_pred CCCCeEEEEcCCCCHHHHHHH--------h--C---------CC---CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE
Confidence 345799999999999988776 2 1 11 225666665432211111111 11122
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccccCCCCc-cccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPK-EITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~-~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
-+..+....|-.+ .+++++|+|++....++ .|. .+.. ..||+.
T Consensus 152 ~~~~~D~~~~~~~-~~~~~fDvIi~d~~~~~---~~~~~l~~--------------------------------~~~l~~ 195 (304)
T 3bwc_A 152 TVRVGDGLAFVRQ-TPDNTYDVVIIDTTDPA---GPASKLFG--------------------------------EAFYKD 195 (304)
T ss_dssp EEEESCHHHHHHS-SCTTCEEEEEEECC------------CC--------------------------------HHHHHH
T ss_pred EEEECcHHHHHHh-ccCCceeEEEECCCCcc---ccchhhhH--------------------------------HHHHHH
Confidence 2444432222111 15789999999877665 221 1100 236777
Q ss_pred HHhhcccCceEEEEe
Q 017439 214 RAQELVPGGLLLLLT 228 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~ 228 (371)
-.+-|+|||+|++..
T Consensus 196 ~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 196 VLRILKPDGICCNQG 210 (304)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEec
Confidence 788999999999985
No 155
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.22 E-value=0.0018 Score=60.28 Aligned_cols=123 Identities=15% Similarity=0.196 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~g 139 (371)
...+|+|+|||+|..++.+. . . .| ..+++..|.-..--...=+.. ...+-.|..+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la--------~-~----------~~---~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~ 166 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALA--------S-E----------RP---DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS 166 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------H-H----------CT---TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC
T ss_pred CCCEEEEecCCccHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 34699999999999988776 2 1 12 235677776443222111111 1111223333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCc---cccCC-CCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPK---EITNS-NSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~---~l~d~-~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
.+.. .+|++++|+++|+...+|... +. .+..+ ...++..| ...-.++..+++.-.
T Consensus 167 ---d~~~-~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~----------------~~g~~~~~~~l~~~~ 225 (276)
T 2b3t_A 167 ---DWFS-ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAA----------------DSGMADIVHIIEQSR 225 (276)
T ss_dssp ---STTG-GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCH----------------HHHTHHHHHHHHHHG
T ss_pred ---chhh-hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcCC----------------CcHHHHHHHHHHHHH
Confidence 2333 345788999999988887654 11 11100 00011000 111245667888889
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||++++..
T Consensus 226 ~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 226 NALVSGGFLLLEH 238 (276)
T ss_dssp GGEEEEEEEEEEC
T ss_pred HhcCCCCEEEEEE
Confidence 9999999999974
No 156
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.20 E-value=0.001 Score=59.06 Aligned_cols=18 Identities=17% Similarity=0.087 Sum_probs=16.2
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
.+|+|+|||+|..++.++
T Consensus 56 ~~vLDlgcG~G~~~~~l~ 73 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEAL 73 (202)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHH
Confidence 689999999999998766
No 157
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.18 E-value=0.00011 Score=66.73 Aligned_cols=79 Identities=16% Similarity=0.014 Sum_probs=46.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~g 139 (371)
..+|+|+|||+|..++.+... -.+|+..|+-..-....=+.+ .- .+--|..+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~------------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 134 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT------------------------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICG 134 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT------------------------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred CCEEEECccccCHHHHHHHHc------------------------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEEC
Confidence 469999999999999988731 013555555433222221111 11 11223444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCC
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIP 170 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP 170 (371)
. ...+.|++++|+++++..+||.....
T Consensus 135 d----~~~~~~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 135 D----FLLLASFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp C----HHHHGGGCCCSEEEECCCCSSGGGGG
T ss_pred C----hHHhcccCCCCEEEECCCcCCcchhh
Confidence 3 22333678999999999999976544
No 158
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.15 E-value=0.003 Score=59.21 Aligned_cols=99 Identities=8% Similarity=0.033 Sum_probs=60.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcce-eeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKY-FATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~-f~~g 139 (371)
.-+|+|+|||+|..|+.+. . + -+ . +|+..|+-..--...=+.+. -...+ |..|
T Consensus 126 ~~~VLDlgcG~G~~~~~la--------~-~----------~~---~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~ 182 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIA--------V-Y----------GK---A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp TCEEEETTCTTTTTHHHHH--------H-H----------TC---C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCEEEEecccCCHHHHHHH--------H-h----------CC---C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 4689999999999999877 2 1 11 3 57777775543322222111 11122 5555
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. ...+.+++++|++++. .|... ..||..-.+-|+
T Consensus 183 D----~~~~~~~~~fD~Vi~~--------~p~~~----------------------------------~~~l~~~~~~Lk 216 (278)
T 2frn_A 183 D----NRDFPGENIADRILMG--------YVVRT----------------------------------HEFIPKALSIAK 216 (278)
T ss_dssp C----TTTCCCCSCEEEEEEC--------CCSSG----------------------------------GGGHHHHHHHEE
T ss_pred C----HHHhcccCCccEEEEC--------CchhH----------------------------------HHHHHHHHHHCC
Confidence 5 2333447899999884 22111 125666667899
Q ss_pred cCceEEEEecCc
Q 017439 220 PGGLLLLLTPTI 231 (371)
Q Consensus 220 pGG~lvl~~~gr 231 (371)
|||++++.....
T Consensus 217 pgG~l~~~~~~~ 228 (278)
T 2frn_A 217 DGAIIHYHNTVP 228 (278)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCeEEEEEEeec
Confidence 999999988654
No 159
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.14 E-value=0.0016 Score=57.29 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=58.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~~~~~f~~gv 140 (371)
..+|+|+|||+|..++.+. . . .| ..+++..|.-..-....=+. ....+-.|..+.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~--------~-~----------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 123 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLS--------I-V----------RP---EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSR 123 (207)
T ss_dssp SSEEEEETCTTTTTHHHHH--------H-H----------CT---TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCeEEEECCCCCHHHHHHH--------H-H----------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecc
Confidence 4599999999999998877 2 1 12 23567777644332222111 111111233332
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
+. .+.|++++|+++|... .++..+|+.-.+-|+|
T Consensus 124 ---~~-~~~~~~~~D~i~~~~~------------------------------------------~~~~~~l~~~~~~L~~ 157 (207)
T 1jsx_A 124 ---VE-EFPSEPPFDGVISRAF------------------------------------------ASLNDMVSWCHHLPGE 157 (207)
T ss_dssp ---TT-TSCCCSCEEEEECSCS------------------------------------------SSHHHHHHHHTTSEEE
T ss_pred ---hh-hCCccCCcCEEEEecc------------------------------------------CCHHHHHHHHHHhcCC
Confidence 22 2346788999997421 1234578888899999
Q ss_pred CceEEEEec
Q 017439 221 GGLLLLLTP 229 (371)
Q Consensus 221 GG~lvl~~~ 229 (371)
||++++...
T Consensus 158 gG~l~~~~~ 166 (207)
T 1jsx_A 158 QGRFYALKG 166 (207)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEeC
Confidence 999999853
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.14 E-value=0.00082 Score=60.70 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=60.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcC---chhhhhhcCCCCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN---DFNTLFKSVPLSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~N---DFn~lF~~l~~~~~~f~~g 139 (371)
..-+|+|+|||+|..+..+. + ++. | .-+|+.-|+... +.....+.. .+-.|..+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la--------~-~~g---------~---~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~ 133 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVS--------D-IVG---------P---DGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIE 133 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------H-HHC---------T---TCEEEEECCCHHHHHHHHHHHHHC--TTEEEECS
T ss_pred CCCEEEEEcccCCHHHHHHH--------H-HhC---------C---CcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEc
Confidence 34699999999999998877 2 221 1 225667776542 222222222 12224444
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.-.....--++++++|++++..+ .|. +...++..-.+-|+
T Consensus 134 d~~~~~~~~~~~~~~D~V~~~~~------~~~----------------------------------~~~~~~~~~~~~Lk 173 (233)
T 2ipx_A 134 DARHPHKYRMLIAMVDVIFADVA------QPD----------------------------------QTRIVALNAHTFLR 173 (233)
T ss_dssp CTTCGGGGGGGCCCEEEEEECCC------CTT----------------------------------HHHHHHHHHHHHEE
T ss_pred ccCChhhhcccCCcEEEEEEcCC------Ccc----------------------------------HHHHHHHHHHHHcC
Confidence 32221101135689999999543 111 11235666678999
Q ss_pred cCceEEEEecC
Q 017439 220 PGGLLLLLTPT 230 (371)
Q Consensus 220 pGG~lvl~~~g 230 (371)
|||++++.+..
T Consensus 174 pgG~l~i~~~~ 184 (233)
T 2ipx_A 174 NGGHFVISIKA 184 (233)
T ss_dssp EEEEEEEEEEH
T ss_pred CCeEEEEEEcc
Confidence 99999997654
No 161
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.12 E-value=0.0012 Score=63.05 Aligned_cols=79 Identities=13% Similarity=0.050 Sum_probs=44.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc---CCCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS---VPLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~---l~~~~~~f~~gv 140 (371)
..+|+|+|||+|..++.+... .. . ..+|+..|+-.+--...=+. ....+--|..+.
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~---------~~--------~----~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d 134 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRV---------VG--------E----KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD 134 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---------HC--------T----TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred cCEEEEecCCchHHHHHHHHh---------cC--------C----CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 469999999999988877621 11 0 12455666543322111111 111112233333
Q ss_pred CCCcccccCCCCceeEEEecCCcccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWL 166 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWL 166 (371)
+..-+.+.+++|++++...+|++
T Consensus 135 ---~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 135 ---GYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp ---GGGCCGGGCCEEEEEECSBBSCC
T ss_pred ---hhhccccCCCeEEEEEcCCHHHH
Confidence 22223456889999999999984
No 162
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.07 E-value=0.00053 Score=65.77 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=65.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhc-----CCCCcc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKS-----VPLSKK 134 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~-----l~~~~~ 134 (371)
.+.+|+|+|||+|..+..+. + . .| .-++...|+-..--... |.. +...+-
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v 134 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVL--------K--H---------PT---VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRA 134 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHT--------T--S---------TT---CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTE
T ss_pred CCCeEEEEcCCcCHHHHHHH--------h--c---------CC---CCEEEEEECCHHHHHHHHHHhHhhccccccCCce
Confidence 45799999999999988776 2 1 11 22566666543321111 111 111222
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCCccc-cCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNALPW-LSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHW-LS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
-+..+....|-.+ +++++|+|++....|| ++..+..+. ...|++.
T Consensus 135 ~~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~~~~~~l~--------------------------------~~~~l~~ 180 (314)
T 1uir_A 135 VLVIDDARAYLER--TEERYDVVIIDLTDPVGEDNPARLLY--------------------------------TVEFYRL 180 (314)
T ss_dssp EEEESCHHHHHHH--CCCCEEEEEEECCCCBSTTCGGGGGS--------------------------------SHHHHHH
T ss_pred EEEEchHHHHHHh--cCCCccEEEECCCCcccccCcchhcc--------------------------------HHHHHHH
Confidence 3444543333222 4788999999988887 222121111 1347777
Q ss_pred HHhhcccCceEEEEec
Q 017439 214 RAQELVPGGLLLLLTP 229 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~~ 229 (371)
-.+-|+|||+|++...
T Consensus 181 ~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 181 VKAHLNPGGVMGMQTG 196 (314)
T ss_dssp HHHTEEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEEcc
Confidence 7899999999999764
No 163
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.07 E-value=0.0012 Score=64.02 Aligned_cols=73 Identities=12% Similarity=0.136 Sum_probs=41.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CC-Ccceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PL-SKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~-~~~~f~ 137 (371)
+..+|+|+|||+|..++.+. + . + ..+|+..|+.. . -...+.. .- .+--+.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la--------~-~-----------g---~~~V~~vD~s~-~-~~~a~~~~~~~~l~~~v~~~ 104 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAA--------Q-A-----------G---ARKIYAVEAST-M-AQHAEVLVKSNNLTDRIVVI 104 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------H-T-----------T---CSEEEEEECST-H-HHHHHHHHHHTTCTTTEEEE
T ss_pred CcCEEEEcCCCccHHHHHHH--------h-C-----------C---CCEEEEECCHH-H-HHHHHHHHHHcCCCCcEEEE
Confidence 34699999999999887766 2 1 1 12577777642 2 2222211 11 112233
Q ss_pred eccCCCcccccCCCCceeEEEecCCcc
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALP 164 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alH 164 (371)
.+. +..+-+++++|+++|...++
T Consensus 105 ~~d----~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 105 PGK----VEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp ESC----TTTCCCSSCEEEEEECCCBT
T ss_pred Ecc----hhhCCCCCceeEEEEeCchh
Confidence 333 23333447899999987654
No 164
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.06 E-value=0.0033 Score=56.73 Aligned_cols=20 Identities=30% Similarity=0.265 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la 93 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVA 93 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH
T ss_pred CCCEEEEEcccCCHHHHHHH
Confidence 45699999999999998877
No 165
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.03 E-value=0.0059 Score=61.42 Aligned_cols=21 Identities=24% Similarity=0.207 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...+|+|+|||+|..++.+..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~ 262 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAAL 262 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHH
Confidence 457999999999999998774
No 166
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.01 E-value=0.0024 Score=61.19 Aligned_cols=19 Identities=11% Similarity=0.198 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 106 g~~VLDiG~G~G~~~~~la 124 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLS 124 (336)
T ss_dssp TCEEEEECCTTSHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHH
Confidence 4699999999999999877
No 167
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.01 E-value=0.0016 Score=58.30 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la 92 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVS 92 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHH
Confidence 34699999999999998877
No 168
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.01 E-value=0.0013 Score=61.67 Aligned_cols=108 Identities=16% Similarity=0.137 Sum_probs=62.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-C-----CC---C--
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-V-----PL---S-- 132 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-l-----~~---~-- 132 (371)
..+|+|+|||+|..++.+. . .. .-+|+..|+++.+.-...+. + .. .
T Consensus 80 ~~~vLDlG~G~G~~~~~~a--------~--~~-------------~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~ 136 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAF--------L--AG-------------ADQVVATDYPDPEILNSLESNIREHTANSCSSETV 136 (281)
T ss_dssp TCEEEETTCTTSHHHHHHH--------H--TT-------------CSEEEEEECSCHHHHHHHHHHHHTTCC--------
T ss_pred CCeEEEecccccHHHHHHH--------H--cC-------------CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccC
Confidence 4599999999999888665 2 10 11577888743222111111 1 00 0
Q ss_pred --cce-eeeccCCCcccccC---CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhh
Q 017439 133 --KKY-FATGVPGSFHGRLF---PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKND 206 (371)
Q Consensus 133 --~~~-f~~gvpgSFy~rLf---P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D 206 (371)
.++ +....-|.....+. +++++|+|+++.++++...
T Consensus 137 ~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~-------------------------------------- 178 (281)
T 3bzb_A 137 KRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA-------------------------------------- 178 (281)
T ss_dssp --CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG--------------------------------------
T ss_pred CCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH--------------------------------------
Confidence 112 22222233233333 5789999999999888222
Q ss_pred HHHHHHHHHhhcc---c--CceEEEEecCcC
Q 017439 207 IESFLNARAQELV---P--GGLLLLLTPTIR 232 (371)
Q Consensus 207 ~~~FL~~Ra~EL~---p--GG~lvl~~~gr~ 232 (371)
...+|+.-.+-|+ | ||++++.+..+.
T Consensus 179 ~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 179 HDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp HHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 2335666677899 9 999988876543
No 169
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.99 E-value=0.0045 Score=58.99 Aligned_cols=106 Identities=8% Similarity=0.069 Sum_probs=59.2
Q ss_pred CceEEeeecCCCCccc----HHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCccee-e
Q 017439 63 STFKIADLGCSTGPNT----FIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYF-A 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns----~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f-~ 137 (371)
...+|+|+|||+|.+. ..+. + +.. + .-+|+..|+-.. ++ +--| +
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a--------~-~~~---------~---~~~V~gvDis~~--------v~--~v~~~i 111 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLR--------Q-WLP---------T---GTLLVDSDLNDF--------VS--DADSTL 111 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHH--------H-HSC---------T---TCEEEEEESSCC--------BC--SSSEEE
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHH--------H-HcC---------C---CCEEEEEECCCC--------CC--CCEEEE
Confidence 4579999999885554 2111 2 221 1 236777787655 22 2234 4
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.|. . ..+.+++++|+|+|+.+.+|.-... .+. .++ ...+...|+.-.+-
T Consensus 112 ~gD---~-~~~~~~~~fD~Vvsn~~~~~~g~~~---~d~-----~~~-------------------~~l~~~~l~~a~r~ 160 (290)
T 2xyq_A 112 IGD---C-ATVHTANKWDLIISDMYDPRTKHVT---KEN-----DSK-------------------EGFFTYLCGFIKQK 160 (290)
T ss_dssp ESC---G-GGCCCSSCEEEEEECCCCCC---CC---SCC-----CCC-------------------CTHHHHHHHHHHHH
T ss_pred ECc---c-ccCCccCcccEEEEcCCcccccccc---ccc-----cch-------------------HHHHHHHHHHHHHh
Confidence 443 2 2233347899999987665521110 010 000 12344567777889
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|+|||+|++....
T Consensus 161 LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 161 LALGGSIAVKITE 173 (290)
T ss_dssp EEEEEEEEEEECS
T ss_pred cCCCcEEEEEEec
Confidence 9999999997643
No 170
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.97 E-value=0.0025 Score=54.18 Aligned_cols=20 Identities=25% Similarity=0.415 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~ 54 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIA 54 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 34699999999999998876
No 171
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.97 E-value=0.00063 Score=58.44 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..++.+.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~ 50 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV 50 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH
Confidence 34689999999999998776
No 172
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.93 E-value=0.0019 Score=59.02 Aligned_cols=114 Identities=18% Similarity=0.230 Sum_probs=62.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcC--------CC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSV--------PL 131 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l--------~~ 131 (371)
+.-+|+|+|||+|..++.+.. . .| ...|+..|.-..--... ++.. ..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~---------~----------~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 106 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSP---------A----------FP---EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF 106 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHH---------H----------ST---TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT
T ss_pred CCCEEEEEcCCCCHHHHHHHH---------h----------CC---CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC
Confidence 457999999999999988772 1 11 23455556443221111 0000 00
Q ss_pred CcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHH
Q 017439 132 SKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFL 211 (371)
Q Consensus 132 ~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL 211 (371)
.+--|..+..-.+....++.+++|.++....=-|..+. .. +.++. . ..||
T Consensus 107 ~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~----~~-------~~r~~----~---------------~~~l 156 (246)
T 2vdv_E 107 QNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQR----KH-------KARII----T---------------NTLL 156 (246)
T ss_dssp TTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSCC----C---------------HHHH
T ss_pred CcEEEEeccHHHHHHHhccccccCEEEEECCCcccccc----hh-------HHhhc----c---------------HHHH
Confidence 11234444444445566889999999865433331110 00 00000 0 2467
Q ss_pred HHHHhhcccCceEEEEe
Q 017439 212 NARAQELVPGGLLLLLT 228 (371)
Q Consensus 212 ~~Ra~EL~pGG~lvl~~ 228 (371)
+.-++-|+|||++++.+
T Consensus 157 ~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 157 SEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEe
Confidence 77778999999999965
No 173
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.93 E-value=0.00048 Score=59.29 Aligned_cols=20 Identities=20% Similarity=0.042 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~ 63 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV 63 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHH
Confidence 34699999999999998766
No 174
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.91 E-value=0.0033 Score=57.36 Aligned_cols=21 Identities=10% Similarity=-0.066 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...+|+|+|||+|..++.+..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~ 85 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGA 85 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHH
Confidence 457999999999999988763
No 175
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.89 E-value=0.0076 Score=54.75 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=59.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCc-ceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSK-KYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~-~~f~~ 138 (371)
..-+|+|+|||+|..++.+. + ... | ..+++..|+...-....=+.+ .-.. --+..
T Consensus 93 ~~~~vldiG~G~G~~~~~l~--------~-~~~---------~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~ 151 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLA--------N-IVG---------P---EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL 151 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------H-HHC---------T---TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC
T ss_pred CCCEEEEecCCchHHHHHHH--------H-HhC---------C---CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 45789999999999998877 2 211 1 235777777543322221111 1111 22333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ .+. ..+|++++|++++. .|.. ..+|+.-.+-|
T Consensus 152 ~---d~~-~~~~~~~~D~v~~~--------~~~~-----------------------------------~~~l~~~~~~L 184 (255)
T 3mb5_A 152 K---DIY-EGIEEENVDHVILD--------LPQP-----------------------------------ERVVEHAAKAL 184 (255)
T ss_dssp S---CGG-GCCCCCSEEEEEEC--------SSCG-----------------------------------GGGHHHHHHHE
T ss_pred C---chh-hccCCCCcCEEEEC--------CCCH-----------------------------------HHHHHHHHHHc
Confidence 3 333 44788999999983 1211 11466667889
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||++++....
T Consensus 185 ~~gG~l~~~~~~ 196 (255)
T 3mb5_A 185 KPGGFFVAYTPC 196 (255)
T ss_dssp EEEEEEEEEESS
T ss_pred CCCCEEEEEECC
Confidence 999999987643
No 176
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.87 E-value=0.0041 Score=59.56 Aligned_cols=99 Identities=9% Similarity=-0.007 Sum_probs=57.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCch---hhhhhcCCCCcceeee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDF---NTLFKSVPLSKKYFAT 138 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDF---n~lF~~l~~~~~~f~~ 138 (371)
...-+|+|+|||+|+.|...+. +. + ..+|+--|.-..-- ...++...-.+--|..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA---------~~----------~---ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~ 178 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLS---------HV----------Y---GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVIT 178 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHH---------HT----------T---CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCcCEEEEECCCccHHHHHHHH---------Hc----------c---CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEE
Confidence 3468999999999998876652 11 1 12455555543221 1111111112223555
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
|.... +|++++|++++... +| |...+|+.-.+-|
T Consensus 179 gDa~~-----l~d~~FDvV~~~a~------~~-----------------------------------d~~~~l~el~r~L 212 (298)
T 3fpf_A 179 GDETV-----IDGLEFDVLMVAAL------AE-----------------------------------PKRRVFRNIHRYV 212 (298)
T ss_dssp SCGGG-----GGGCCCSEEEECTT------CS-----------------------------------CHHHHHHHHHHHC
T ss_pred Cchhh-----CCCCCcCEEEECCC------cc-----------------------------------CHHHHHHHHHHHc
Confidence 54322 36789999998654 22 1233677777899
Q ss_pred ccCceEEEEe
Q 017439 219 VPGGLLLLLT 228 (371)
Q Consensus 219 ~pGG~lvl~~ 228 (371)
+|||++++..
T Consensus 213 kPGG~Lvv~~ 222 (298)
T 3fpf_A 213 DTETRIIYRT 222 (298)
T ss_dssp CTTCEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999999875
No 177
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.83 E-value=0.0011 Score=59.39 Aligned_cols=19 Identities=16% Similarity=0.174 Sum_probs=17.2
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 59 ~~~vLdiG~G~G~~~~~la 77 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMA 77 (221)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHH
Confidence 4699999999999999877
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.82 E-value=0.0019 Score=58.04 Aligned_cols=19 Identities=26% Similarity=0.252 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|..+.
T Consensus 85 ~~~VLdiG~G~G~~~~~la 103 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFY 103 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHH
Confidence 4699999999999998776
No 179
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.81 E-value=0.00066 Score=60.84 Aligned_cols=82 Identities=12% Similarity=0.025 Sum_probs=45.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---C-----CCcce
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---P-----LSKKY 135 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~-----~~~~~ 135 (371)
..+|+|+|||+|..+..+. + .... .. .| ..+|+..|.-..--...-+.+ . ..+-.
T Consensus 81 ~~~VLdiG~G~G~~~~~la--------~-~~~~---~~--~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 143 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMA--------I-KMNV---LE--NK---NSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK 143 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH--------H-HTTT---TT--CT---TCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE
T ss_pred CCEEEEECCCCCHHHHHHH--------H-Hhcc---cC--CC---CCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE
Confidence 4699999999999888776 2 2110 00 12 346777776443221111111 1 11223
Q ss_pred eeeccCCCccccc----CCCCceeEEEecCCccc
Q 017439 136 FATGVPGSFHGRL----FPESSLHVAHTSNALPW 165 (371)
Q Consensus 136 f~~gvpgSFy~rL----fP~~Svd~~~Ss~alHW 165 (371)
|..+. ...-+ ++.+++|++++..++|+
T Consensus 144 ~~~~d---~~~~~~~~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 144 IIHKN---IYQVNEEEKKELGLFDAIHVGASASE 174 (227)
T ss_dssp EEECC---GGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred EEECC---hHhcccccCccCCCcCEEEECCchHH
Confidence 33333 22222 45678999999999987
No 180
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.81 E-value=0.011 Score=52.47 Aligned_cols=21 Identities=14% Similarity=0.058 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..++.+..
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~ 75 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCL 75 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHH
Confidence 357999999999999988773
No 181
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=96.80 E-value=0.0028 Score=56.13 Aligned_cols=25 Identities=20% Similarity=0.131 Sum_probs=19.3
Q ss_pred hHHHHHHHHHhhcccCceEEEEecC
Q 017439 206 DIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.....|+.-.+-|+|||+|++.+..
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcC
Confidence 3445677777899999999987753
No 182
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.79 E-value=0.0048 Score=56.95 Aligned_cols=100 Identities=18% Similarity=0.230 Sum_probs=58.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC------CCcceee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP------LSKKYFA 137 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~------~~~~~f~ 137 (371)
.-+|+|+|||+|..+..+. + .+. | ..+++..|.-..-....=+.+. ..+--+.
T Consensus 100 ~~~vLdiG~G~G~~~~~l~--------~-~~~---------~---~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~ 158 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLL--------R-AVG---------P---AGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV 158 (280)
T ss_dssp TCEEEEECCTTSHHHHHHH--------H-HHC---------T---TSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred CCEEEEEcccccHHHHHHH--------H-HhC---------C---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 4689999999999998777 2 121 1 2356677764332221111110 0111222
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
. +.+.+..+|++++|++++.. |.. ..+|+.-.+-
T Consensus 159 ~---~d~~~~~~~~~~~D~v~~~~--------~~~-----------------------------------~~~l~~~~~~ 192 (280)
T 1i9g_A 159 V---SDLADSELPDGSVDRAVLDM--------LAP-----------------------------------WEVLDAVSRL 192 (280)
T ss_dssp C---SCGGGCCCCTTCEEEEEEES--------SCG-----------------------------------GGGHHHHHHH
T ss_pred E---CchHhcCCCCCceeEEEECC--------cCH-----------------------------------HHHHHHHHHh
Confidence 2 34444456788999999832 210 0146666788
Q ss_pred cccCceEEEEecC
Q 017439 218 LVPGGLLLLLTPT 230 (371)
Q Consensus 218 L~pGG~lvl~~~g 230 (371)
|+|||++++..+.
T Consensus 193 L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 193 LVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEEEEEEEESS
T ss_pred CCCCCEEEEEeCC
Confidence 9999999998854
No 183
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.79 E-value=0.0042 Score=67.16 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=66.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----C----C-Cc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----P----L-SK 133 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~----~-~~ 133 (371)
...+|+|+|||+|..++.+. + .. .| ..+|+.-|+-..--...=+.+ . . .+
T Consensus 721 ~g~rVLDVGCGTG~lai~LA--------r-~g---------~p---~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLL--------D-YP---------TS---LQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHT--------S-SC---------CC---CCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE
T ss_pred CCCEEEEECCCCCHHHHHHH--------H-hC---------CC---CCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc
Confidence 35799999999999988766 2 11 11 235666666554322221111 0 0 11
Q ss_pred ceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 134 KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 134 ~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
--|..|. ...--++.+++|+|+++.++||+.. .+...||+.
T Consensus 780 VefiqGD---a~dLp~~d~sFDlVV~~eVLeHL~d------------------------------------p~l~~~L~e 820 (950)
T 3htx_A 780 ATLYDGS---ILEFDSRLHDVDIGTCLEVIEHMEE------------------------------------DQACEFGEK 820 (950)
T ss_dssp EEEEESC---TTSCCTTSCSCCEEEEESCGGGSCH------------------------------------HHHHHHHHH
T ss_pred eEEEECc---hHhCCcccCCeeEEEEeCchhhCCh------------------------------------HHHHHHHHH
Confidence 2233333 2333346789999999999999533 122346777
Q ss_pred HHhhcccCceEEEEecCc
Q 017439 214 RAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~~gr 231 (371)
-.+-|+|| .+++..+.+
T Consensus 821 I~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 821 VLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HHHTTCCS-EEEEEECBG
T ss_pred HHHHcCCC-EEEEEecCc
Confidence 78899999 888877654
No 184
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.76 E-value=0.0012 Score=59.44 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 55 ~~~vLdiG~G~G~~~~~la 73 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMA 73 (233)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4599999999999998776
No 185
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.76 E-value=0.002 Score=59.63 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=18.3
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
....+|+|+|||+|..++.+.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la 99 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLK 99 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHH
Confidence 456799999999999998876
No 186
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.75 E-value=0.0022 Score=57.27 Aligned_cols=20 Identities=25% Similarity=0.172 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la 96 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA 96 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHH
Confidence 34699999999999998776
No 187
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.73 E-value=0.0028 Score=60.64 Aligned_cols=19 Identities=32% Similarity=0.569 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|..+.
T Consensus 83 g~~VLDlGcG~G~~s~~la 101 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCG 101 (305)
T ss_dssp CEEEEEETCTTSHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHH
Confidence 4799999999999998777
No 188
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.72 E-value=0.00076 Score=57.07 Aligned_cols=19 Identities=16% Similarity=0.025 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.+.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~ 60 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 4689999999999988776
No 189
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.72 E-value=0.0033 Score=58.45 Aligned_cols=100 Identities=10% Similarity=0.211 Sum_probs=59.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCCcceee
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLSKKYFA 137 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~~~~f~ 137 (371)
....+|+|+|||+|..++.+. + .. .| ..+|+.-|.-..--...-+.+ ...+--|.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la--------~-~~---------~~---~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~ 167 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYIL--------Y-AL---------NG---KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTS 167 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHH--------H-HH---------TT---SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHH--------H-Hc---------CC---CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 345799999999999988776 2 11 11 235777776443322221111 11122233
Q ss_pred eccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 138 TGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 138 ~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
.+. +.. .+|++++|++++ | +|.. ..+|+.-.+-
T Consensus 168 ~~d---~~~-~~~~~~fD~Vi~----~----~~~~-----------------------------------~~~l~~~~~~ 200 (275)
T 1yb2_A 168 RSD---IAD-FISDQMYDAVIA----D----IPDP-----------------------------------WNHVQKIASM 200 (275)
T ss_dssp CSC---TTT-CCCSCCEEEEEE----C----CSCG-----------------------------------GGSHHHHHHT
T ss_pred ECc---hhc-cCcCCCccEEEE----c----CcCH-----------------------------------HHHHHHHHHH
Confidence 333 333 567889999998 2 2311 0256777788
Q ss_pred cccCceEEEEec
Q 017439 218 LVPGGLLLLLTP 229 (371)
Q Consensus 218 L~pGG~lvl~~~ 229 (371)
|+|||++++...
T Consensus 201 LkpgG~l~i~~~ 212 (275)
T 1yb2_A 201 MKPGSVATFYLP 212 (275)
T ss_dssp EEEEEEEEEEES
T ss_pred cCCCCEEEEEeC
Confidence 999999999874
No 190
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.69 E-value=0.0016 Score=59.18 Aligned_cols=20 Identities=20% Similarity=0.310 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..+|+|+|||+|..++.+..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~ 80 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFAS 80 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHH
Confidence 46999999999999998773
No 191
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.66 E-value=0.0012 Score=59.84 Aligned_cols=100 Identities=11% Similarity=0.132 Sum_probs=58.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~~-~~~f~~ 138 (371)
+..+|+|+|||+|..|+.+. . . .| ..+|+..|.-..--... ++...-. +--|..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la--------~-~----------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 128 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFA--------S-I----------SD---DIHVTTIERNETMIQYAKQNLATYHFENQVRIIE 128 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHH--------T-T----------CT---TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 35699999999999998776 2 1 12 23567777644322221 1111111 223444
Q ss_pred ccCCCcccccCC---CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 139 GVPGSFHGRLFP---ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 139 gvpgSFy~rLfP---~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+... ...| ++++|++++... + .++..||+.-.
T Consensus 129 ~d~~----~~~~~~~~~~fD~V~~~~~-------~----------------------------------~~~~~~l~~~~ 163 (232)
T 3ntv_A 129 GNAL----EQFENVNDKVYDMIFIDAA-------K----------------------------------AQSKKFFEIYT 163 (232)
T ss_dssp SCGG----GCHHHHTTSCEEEEEEETT-------S----------------------------------SSHHHHHHHHG
T ss_pred CCHH----HHHHhhccCCccEEEEcCc-------H----------------------------------HHHHHHHHHHH
Confidence 4422 2233 689999996521 1 12333677777
Q ss_pred hhcccCceEEEEec
Q 017439 216 QELVPGGLLLLLTP 229 (371)
Q Consensus 216 ~EL~pGG~lvl~~~ 229 (371)
+-|+|||++++...
T Consensus 164 ~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 164 PLLKHQGLVITDNV 177 (232)
T ss_dssp GGEEEEEEEEEECT
T ss_pred HhcCCCeEEEEeeC
Confidence 99999999988543
No 192
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.65 E-value=0.002 Score=60.72 Aligned_cols=108 Identities=11% Similarity=0.049 Sum_probs=62.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
++.+|+|+|||+|..+..+. + . .| ..++...|+-..--...=+.++ ..+--
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~ 135 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELC--------K--Y---------KS---VENIDICEIDETVIEVSKIYFKNISCGYEDKRVN 135 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEE
T ss_pred CCCeEEEEeCCcCHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEE
Confidence 45799999999999988776 2 1 11 2245566654322111111111 11223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCc-cccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPK-EITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~-~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
+..+....|-.. .++++|+|++....+| .|. .+.. ..|++.-
T Consensus 136 ~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~---~~~~~l~~--------------------------------~~~l~~~ 178 (283)
T 2i7c_A 136 VFIEDASKFLEN--VTNTYDVIIVDSSDPI---GPAETLFN--------------------------------QNFYEKI 178 (283)
T ss_dssp EEESCHHHHHHH--CCSCEEEEEEECCCTT---TGGGGGSS--------------------------------HHHHHHH
T ss_pred EEECChHHHHHh--CCCCceEEEEcCCCCC---CcchhhhH--------------------------------HHHHHHH
Confidence 444443333222 2678999999776665 221 1100 3477888
Q ss_pred HhhcccCceEEEEec
Q 017439 215 AQELVPGGLLLLLTP 229 (371)
Q Consensus 215 a~EL~pGG~lvl~~~ 229 (371)
.+-|+|||+|++...
T Consensus 179 ~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 179 YNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHEEEEEEEEEECC
T ss_pred HHhcCCCcEEEEECC
Confidence 889999999998853
No 193
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.64 E-value=0.0045 Score=58.34 Aligned_cols=20 Identities=30% Similarity=0.569 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la 101 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAA 101 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHH
T ss_pred CCCEEEEeccCCCHHHHHHH
Confidence 35799999999999988777
No 194
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.63 E-value=0.0047 Score=57.85 Aligned_cols=20 Identities=35% Similarity=0.619 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..|..+.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la 93 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA 93 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCcCCCHHHHHHH
Confidence 35799999999999988776
No 195
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.63 E-value=0.0069 Score=54.88 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=57.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC----CCCcceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV----PLSKKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l----~~~~~~f~~ 138 (371)
..-+|+|+|||+|..++.+. + .+. | ..+++..|.-..-....-+.+ ...+-.|..
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~--------~-~~~---------~---~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~ 154 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLA--------R-AVG---------E---KGLVESYEARPHHLAQAERNVRAFWQVENVRFHL 154 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------H-HHC---------T---TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHH--------H-HhC---------C---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34699999999999988776 2 211 1 125666665433222221111 111112333
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+ ++.+--+|++++|++++. + |.. ..+|+.-.+-|
T Consensus 155 ~---d~~~~~~~~~~~D~v~~~----~----~~~-----------------------------------~~~l~~~~~~L 188 (258)
T 2pwy_A 155 G---KLEEAELEEAAYDGVALD----L----MEP-----------------------------------WKVLEKAALAL 188 (258)
T ss_dssp S---CGGGCCCCTTCEEEEEEE----S----SCG-----------------------------------GGGHHHHHHHE
T ss_pred C---chhhcCCCCCCcCEEEEC----C----cCH-----------------------------------HHHHHHHHHhC
Confidence 3 233222678899999972 2 211 01567777889
Q ss_pred ccCceEEEEec
Q 017439 219 VPGGLLLLLTP 229 (371)
Q Consensus 219 ~pGG~lvl~~~ 229 (371)
+|||++++..+
T Consensus 189 ~~gG~l~~~~~ 199 (258)
T 2pwy_A 189 KPDRFLVAYLP 199 (258)
T ss_dssp EEEEEEEEEES
T ss_pred CCCCEEEEEeC
Confidence 99999999874
No 196
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.62 E-value=0.0014 Score=62.35 Aligned_cols=109 Identities=11% Similarity=0.047 Sum_probs=57.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-------CCCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-------VPLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-------l~~~~~~ 135 (371)
.+.+|+|+|||+|..+..++ + . .| .-+|...|+-..--...=+. +...+--
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~ 147 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVL--------K--H---------DS---VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAE 147 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHT--------T--S---------TT---CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------h--c---------CC---CCEEEEEECCHHHHHHHHHHhHhhccccCCCceE
Confidence 34799999999999988776 2 1 11 22566666543211111111 1112223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ +++++|+|++...-+|... +..+ ....||+.-+
T Consensus 148 ~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~-~~~l--------------------------------~~~~~l~~~~ 192 (296)
T 1inl_A 148 IVIANGAEYVRK--FKNEFDVIIIDSTDPTAGQ-GGHL--------------------------------FTEEFYQACY 192 (296)
T ss_dssp EEESCHHHHGGG--CSSCEEEEEEEC-----------C--------------------------------CSHHHHHHHH
T ss_pred EEECcHHHHHhh--CCCCceEEEEcCCCcccCc-hhhh--------------------------------hHHHHHHHHH
Confidence 444443333222 3678999998766555321 1100 1134677777
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 193 ~~LkpgG~lv~~~ 205 (296)
T 1inl_A 193 DALKEDGVFSAET 205 (296)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEc
Confidence 8999999999975
No 197
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.62 E-value=0.0086 Score=57.22 Aligned_cols=125 Identities=13% Similarity=0.059 Sum_probs=66.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gv 140 (371)
..+|+|+|||+|..|+.+. + .+. + .-+|+..|.-..--..+-+.+. ..+-.+..+.
T Consensus 119 g~~VLDlg~G~G~~t~~la--------~-~~~---------~---~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D 177 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLA--------Q-LMR---------N---DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS 177 (315)
T ss_dssp TCEEEECCSSCSHHHHHHH--------H-HTT---------T---CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHH--------H-HhC---------C---CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 4689999999999999877 2 221 1 2357777766554333333221 1112233333
Q ss_pred CCCcccccCCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
...+- .+++++|.|++.. .+.-+.+.|..... -+++.. ....+.-..+|+.-++-
T Consensus 178 ~~~~~---~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~---------------~~~~~~----~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 178 SLHIG---ELNVEFDKILLDAPCTGSGTIHKNPERKWN---------------RTMDDI----KFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp GGGGG---GGCCCEEEEEEECCTTSTTTCC-----------------------CCHHHH----HHHHHHHHHHHHHHHHH
T ss_pred hhhcc---cccccCCEEEEeCCCCCcccccCChhHhhc---------------CCHHHH----HHHHHHHHHHHHHHHHh
Confidence 22211 1357899999842 22222233432110 011211 12234446788888899
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||+|++.++..
T Consensus 236 LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 236 LKPGGILVYSTCSL 249 (315)
T ss_dssp EEEEEEEEEEESCC
T ss_pred CCCCCEEEEEeCCC
Confidence 99999999987643
No 198
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.60 E-value=0.0014 Score=60.18 Aligned_cols=106 Identities=10% Similarity=0.061 Sum_probs=61.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCCC-cceeee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPLS-KKYFAT 138 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~~-~~~f~~ 138 (371)
+..+|+|+|||+|..|+.+. + .+ .| .-+|+..|+-..-.... ++...-. +--|..
T Consensus 63 ~~~~VLdiG~G~G~~~~~la--------~-~~---------~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~ 121 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMA--------R-EL---------PA---DGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE 121 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHH--------T-TS---------CT---TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEecCCchHHHHHHH--------H-hC---------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 35799999999999998777 3 22 11 23577777644332221 2211211 223444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
|....+...+...+++|+|++.... .+...+|+.-.+-|
T Consensus 122 ~d~~~~l~~~~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~L 160 (248)
T 3tfw_A 122 GPALQSLESLGECPAFDLIFIDADK-----------------------------------------PNNPHYLRWALRYS 160 (248)
T ss_dssp SCHHHHHHTCCSCCCCSEEEECSCG-----------------------------------------GGHHHHHHHHHHTC
T ss_pred cCHHHHHHhcCCCCCeEEEEECCch-----------------------------------------HHHHHHHHHHHHhc
Confidence 4432333333335689999985421 11223566667899
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||++++...-
T Consensus 161 kpGG~lv~~~~~ 172 (248)
T 3tfw_A 161 RPGTLIIGDNVV 172 (248)
T ss_dssp CTTCEEEEECCS
T ss_pred CCCeEEEEeCCC
Confidence 999999987653
No 199
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.59 E-value=0.0023 Score=62.05 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=62.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
.+.+|+|+|||+|..++.+. + . .| ..+|...|+-..--...=+.++ ..+--
T Consensus 120 ~~~~VLdIG~G~G~~a~~la--------~--~---------~~---~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~ 177 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVA--------R--H---------AS---IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVN 177 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEE
T ss_pred CCCEEEEECCCccHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE
Confidence 45799999999999888776 2 1 12 2356666664432111111111 12223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ ++++++|+|++....+|- .+..+ ....|++.-.
T Consensus 178 ~~~~D~~~~l~~-~~~~~fDlIi~d~~~p~~--~~~~l--------------------------------~~~~~l~~~~ 222 (334)
T 1xj5_A 178 LVIGDGVAFLKN-AAEGSYDAVIVDSSDPIG--PAKEL--------------------------------FEKPFFQSVA 222 (334)
T ss_dssp EEESCHHHHHHT-SCTTCEEEEEECCCCTTS--GGGGG--------------------------------GSHHHHHHHH
T ss_pred EEECCHHHHHHh-ccCCCccEEEECCCCccC--cchhh--------------------------------hHHHHHHHHH
Confidence 444443333222 356899999997654441 01100 0134777778
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 223 ~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 223 RALRPGGVVCTQA 235 (334)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCcEEEEec
Confidence 8999999999874
No 200
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.59 E-value=0.0052 Score=56.18 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=16.4
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
-+|+|+|||+|..|+.+.
T Consensus 83 ~~VLDiG~GtG~~t~~la 100 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFR 100 (236)
T ss_dssp SEEEEECCTTSHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHH
Confidence 599999999999999776
No 201
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.55 E-value=0.0025 Score=59.93 Aligned_cols=20 Identities=10% Similarity=0.150 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.+.+|+|+|||+|..+..++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~ 94 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVL 94 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHT
T ss_pred CCCeEEEEcCCcCHHHHHHH
Confidence 35799999999999988776
No 202
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.54 E-value=0.02 Score=55.96 Aligned_cols=25 Identities=32% Similarity=0.640 Sum_probs=21.0
Q ss_pred hHHHHHHHHHhhcccCceEEEEecC
Q 017439 206 DIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 206 D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.+..||+.-.+-|+|||++++.++.
T Consensus 142 ~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 142 LYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECh
Confidence 3457888888999999999999864
No 203
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.54 E-value=0.0043 Score=57.59 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=58.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CC-Ccceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PL-SKKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~-~~~~f~~g 139 (371)
..+|+|+|||+|..++.+. + .+. | ..+++..|.-..-....=+.+ .- .+--+..+
T Consensus 113 ~~~VLDiG~G~G~~~~~la--------~-~~~---------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 171 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLA--------R-AVG---------S---SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR 171 (277)
T ss_dssp TCEEEEECCTTSHHHHHHH--------H-HTT---------T---TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC
T ss_pred CCEEEEECCcCCHHHHHHH--------H-HhC---------C---CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC
Confidence 4699999999999988776 2 211 1 236777776443322221111 11 11123333
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
.+.+ .+|++++|++++. .|.. ..+|+.-.+-|+
T Consensus 172 ---d~~~-~~~~~~~D~V~~~--------~~~~-----------------------------------~~~l~~~~~~L~ 204 (277)
T 1o54_A 172 ---DISE-GFDEKDVDALFLD--------VPDP-----------------------------------WNYIDKCWEALK 204 (277)
T ss_dssp ---CGGG-CCSCCSEEEEEEC--------CSCG-----------------------------------GGTHHHHHHHEE
T ss_pred ---CHHH-cccCCccCEEEEC--------CcCH-----------------------------------HHHHHHHHHHcC
Confidence 3333 3788899999983 1321 014666667899
Q ss_pred cCceEEEEec
Q 017439 220 PGGLLLLLTP 229 (371)
Q Consensus 220 pGG~lvl~~~ 229 (371)
|||++++...
T Consensus 205 pgG~l~~~~~ 214 (277)
T 1o54_A 205 GGGRFATVCP 214 (277)
T ss_dssp EEEEEEEEES
T ss_pred CCCEEEEEeC
Confidence 9999999874
No 204
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.54 E-value=0.0043 Score=58.20 Aligned_cols=108 Identities=10% Similarity=0.024 Sum_probs=61.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hh----cCCCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FK----SVPLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~----~l~~~~~~ 135 (371)
++.+|+|+|||+|..+..++ + . .| .-+|..-|+-..--... |. .+...+--
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~ 132 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREIL--------K--H---------PS---VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVD 132 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHT--------T--C---------TT---CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEE
T ss_pred CCCEEEEECCchHHHHHHHH--------h--C---------CC---CceEEEEECCHHHHHHHHHHhHhhccccCCCceE
Confidence 46799999999999888766 2 1 11 12455555533211110 10 11122233
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ +++++|+|++....+|. .|..+.. ..|++.-.
T Consensus 133 v~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~--~~~~l~~--------------------------------~~~~~~~~ 176 (275)
T 1iy9_A 133 VQVDDGFMHIAK--SENQYDVIMVDSTEPVG--PAVNLFT--------------------------------KGFYAGIA 176 (275)
T ss_dssp EEESCSHHHHHT--CCSCEEEEEESCSSCCS--CCCCCST--------------------------------THHHHHHH
T ss_pred EEECcHHHHHhh--CCCCeeEEEECCCCCCC--cchhhhH--------------------------------HHHHHHHH
Confidence 455554443322 46789999998776662 1211111 12666777
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 177 ~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 177 KALKEDGIFVAQT 189 (275)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEc
Confidence 8999999999985
No 205
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.51 E-value=0.0023 Score=61.49 Aligned_cols=108 Identities=16% Similarity=0.114 Sum_probs=58.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
.+.+|+|+|||+|..+..++ + . .| ..+|...|+-..--...=+.++ ..+--
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~ 165 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVL--------K--H---------ES---VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLD 165 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHT--------T--C---------TT---CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEE
Confidence 35799999999999988776 2 1 11 2356666654322111111111 11222
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.+ +++++|+|++...-|| .|.. ..|. ..|++.-.
T Consensus 166 ~~~~D~~~~l~~--~~~~fD~Ii~d~~~~~---~~~~------------------------~l~t-------~~~l~~~~ 209 (314)
T 2b2c_A 166 LFCGDGFEFLKN--HKNEFDVIITDSSDPV---GPAE------------------------SLFG-------QSYYELLR 209 (314)
T ss_dssp EECSCHHHHHHH--CTTCEEEEEECCC-----------------------------------------------HHHHHH
T ss_pred EEEChHHHHHHh--cCCCceEEEEcCCCCC---Ccch------------------------hhhH-------HHHHHHHH
Confidence 344433333222 5788999999765444 1210 0000 34777778
Q ss_pred hhcccCceEEEEe
Q 017439 216 QELVPGGLLLLLT 228 (371)
Q Consensus 216 ~EL~pGG~lvl~~ 228 (371)
+-|+|||+|++..
T Consensus 210 ~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 210 DALKEDGILSSQG 222 (314)
T ss_dssp HHEEEEEEEEEEC
T ss_pred hhcCCCeEEEEEC
Confidence 8999999999886
No 206
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.43 E-value=0.00093 Score=60.65 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=59.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh---hhcCCC--Ccceeee
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL---FKSVPL--SKKYFAT 138 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l---F~~l~~--~~~~f~~ 138 (371)
.-+|+|+|||+|..|+.+. + .+. | .-+|+..|.-..-.... ++...- .+--|..
T Consensus 57 ~~~vLdiG~G~G~~~~~la--------~-~~~---------~---~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYIL--------N-GLA---------D---NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCEEEEESTTHHHHHHHHH--------H-HSC---------T---TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCEEEEcCCchHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 4589999999999999877 2 221 1 22577777655432222 222111 1223444
Q ss_pred ccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 139 GVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 139 gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
|....+..+ ++++++|++|+.... .++..||+.-.+-|
T Consensus 116 gda~~~l~~-~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~L 153 (221)
T 3dr5_A 116 SRPLDVMSR-LANDSYQLVFGQVSP-----------------------------------------MDLKALVDAAWPLL 153 (221)
T ss_dssp SCHHHHGGG-SCTTCEEEEEECCCT-----------------------------------------TTHHHHHHHHHHHE
T ss_pred cCHHHHHHH-hcCCCcCeEEEcCcH-----------------------------------------HHHHHHHHHHHHHc
Confidence 432222222 246899999875311 12233566666889
Q ss_pred ccCceEEEEec
Q 017439 219 VPGGLLLLLTP 229 (371)
Q Consensus 219 ~pGG~lvl~~~ 229 (371)
+|||.+++...
T Consensus 154 kpGG~lv~dn~ 164 (221)
T 3dr5_A 154 RRGGALVLADA 164 (221)
T ss_dssp EEEEEEEETTT
T ss_pred CCCcEEEEeCC
Confidence 99999998543
No 207
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.42 E-value=0.0038 Score=60.08 Aligned_cols=107 Identities=11% Similarity=0.041 Sum_probs=60.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC-------CCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP-------LSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~-------~~~~~ 135 (371)
.+.+|+|+|||+|..+..+. + . .| ..+|...|+-..--...=+.++ ..+--
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~ 173 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELC--------K--Y---------KS---VENIDICEIDETVIEVSKIYFKNISCGYEDKRVN 173 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEE
T ss_pred CCCEEEEEcCCccHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEE
Confidence 35799999999999988776 2 1 11 2256666654322111111111 11222
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhH-HHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDI-ESFLNAR 214 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~-~~FL~~R 214 (371)
+..+....|-.. +++++|+|++...-+| -|.. .-+ ..|++.-
T Consensus 174 ~~~~D~~~~l~~--~~~~fDvIi~d~~~p~---~~~~--------------------------------~l~~~~~l~~~ 216 (321)
T 2pt6_A 174 VFIEDASKFLEN--VTNTYDVIIVDSSDPI---GPAE--------------------------------TLFNQNFYEKI 216 (321)
T ss_dssp EEESCHHHHHHH--CCSCEEEEEEECCCSS---SGGG--------------------------------GGSSHHHHHHH
T ss_pred EEEccHHHHHhh--cCCCceEEEECCcCCC---Ccch--------------------------------hhhHHHHHHHH
Confidence 444443222221 3678999999765444 1210 000 3467777
Q ss_pred HhhcccCceEEEEe
Q 017439 215 AQELVPGGLLLLLT 228 (371)
Q Consensus 215 a~EL~pGG~lvl~~ 228 (371)
.+-|+|||++++..
T Consensus 217 ~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 217 YNALKPNGYCVAQC 230 (321)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhcCCCcEEEEEc
Confidence 78999999999986
No 208
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.40 E-value=0.00098 Score=63.02 Aligned_cols=120 Identities=15% Similarity=0.041 Sum_probs=64.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCc--hhhhhhcCCCCcceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNND--FNTLFKSVPLSKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~ND--Fn~lF~~l~~~~~~f~~g 139 (371)
+.+-+|+|+|||.|+.|+.++.. .| .-++...|.-..- |-.-+-....-..-|..+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~-------------------~p---~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~ 188 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL-------------------PA---ETVYIASDIDARLVGFVDEALTRLNVPHRTNVA 188 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC-------------------CT---TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCceeeeeccCccHHHHHHHhh-------------------CC---CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEe
Confidence 44779999999999999988731 12 2244444443211 111100000000111111
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeec-------CCCHHHHHHHHHHHHhhH
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCS-------GFEKEVAEAYSAQFKNDI 207 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~-------~~~~~~~~ay~~Q~~~D~ 207 (371)
. +----|+...|++.++=++|-|.+-..+.-=..-.++|-+.|.++ +.++...+-|.++|+++.
T Consensus 189 D----~~~~~p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~ 259 (281)
T 3lcv_B 189 D----LLEDRLDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQA 259 (281)
T ss_dssp C----TTTSCCCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHH
T ss_pred e----ecccCCCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHH
Confidence 1 111127888999999999999965544321133346677778763 246666788887766654
No 209
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.39 E-value=0.0022 Score=61.21 Aligned_cols=109 Identities=17% Similarity=0.066 Sum_probs=59.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC-------CCCcce
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV-------PLSKKY 135 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l-------~~~~~~ 135 (371)
.+.+|+|+|||+|..++.++ + . .| ..++...|+-..--...=+.+ ...+--
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~--------~--~---------~~---~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~ 152 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVV--------K--H---------PS---VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLT 152 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHT--------T--C---------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEE
T ss_pred CCCEEEEECCCchHHHHHHH--------H--c---------CC---CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEE
Confidence 45799999999999998776 2 1 11 235666665432211111111 112223
Q ss_pred eeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 136 FATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 136 f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
+..+....|-.. +++++|+|++....|| .|..- .....|++.-.
T Consensus 153 v~~~Da~~~l~~--~~~~fD~Ii~d~~~~~---~~~~~-------------------------------l~~~~~l~~~~ 196 (304)
T 2o07_A 153 LHVGDGFEFMKQ--NQDAFDVIITDSSDPM---GPAES-------------------------------LFKESYYQLMK 196 (304)
T ss_dssp EEESCHHHHHHT--CSSCEEEEEEECC---------------------------------------------CHHHHHHH
T ss_pred EEECcHHHHHhh--CCCCceEEEECCCCCC---Ccchh-------------------------------hhHHHHHHHHH
Confidence 444443333222 4688999999776665 12100 00123677777
Q ss_pred hhcccCceEEEEec
Q 017439 216 QELVPGGLLLLLTP 229 (371)
Q Consensus 216 ~EL~pGG~lvl~~~ 229 (371)
+-|+|||+|++...
T Consensus 197 ~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 197 TALKEDGVLCCQGE 210 (304)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred hccCCCeEEEEecC
Confidence 89999999998763
No 210
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.32 E-value=0.027 Score=54.22 Aligned_cols=113 Identities=15% Similarity=0.060 Sum_probs=61.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~~f~~g 139 (371)
...+|+|+|||+|..++.+.... .| ...++..|.-..--...=+.+.. ..--|..+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~------------------~~---~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~ 261 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL------------------GP---TSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA 261 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH------------------CT---TSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh------------------CC---CceEEEEECCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 34689999999999888776321 01 12345555433221111111100 01122322
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhcc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELV 219 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~ 219 (371)
. +.+-..|.+++|+++++-..+|.... . .+...+...+++.-.+-|+
T Consensus 262 D---~~~~~~~~~~~D~Ii~npPyg~r~~~----------------------~--------~~~~~~~~~~~~~~~~~Lk 308 (354)
T 3tma_A 262 D---ARHLPRFFPEVDRILANPPHGLRLGR----------------------K--------EGLFHLYWDFLRGALALLP 308 (354)
T ss_dssp C---GGGGGGTCCCCSEEEECCCSCC--------------------------C--------HHHHHHHHHHHHHHHHTSC
T ss_pred C---hhhCccccCCCCEEEECCCCcCccCC----------------------c--------ccHHHHHHHHHHHHHHhcC
Confidence 2 22222345668999997665551110 0 1223444668888889999
Q ss_pred cCceEEEEec
Q 017439 220 PGGLLLLLTP 229 (371)
Q Consensus 220 pGG~lvl~~~ 229 (371)
|||++++...
T Consensus 309 pgG~l~i~t~ 318 (354)
T 3tma_A 309 PGGRVALLTL 318 (354)
T ss_dssp TTCEEEEEES
T ss_pred CCcEEEEEeC
Confidence 9999999875
No 211
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.26 E-value=0.016 Score=58.08 Aligned_cols=127 Identities=16% Similarity=0.104 Sum_probs=68.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
..+|+|+|||+|..|..+.. .+.. .-+|+.+|....--..+=+.+ ...+-.+..+.
T Consensus 260 g~~VLDlgaG~G~~t~~la~---------~~~~------------~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D 318 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAE---------LMKN------------KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKD 318 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHH---------HTTT------------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred cCEEEEeCCCccHHHHHHHH---------HcCC------------CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcC
Confidence 46899999999999998772 2110 125777776654433332222 11112233333
Q ss_pred CCCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
...+- .-++++++|.|++ ++.+.-+.+.|+.... .++... ....+.-..+|+.-++-
T Consensus 319 ~~~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~--------------~~~~~~-----~~l~~~q~~iL~~a~~~ 378 (450)
T 2yxl_A 319 ARKAP-EIIGEEVADKVLLDAPCTSSGTIGKNPELRWR--------------LREDKI-----NEMSQLQRELLESAARL 378 (450)
T ss_dssp TTCCS-SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHH--------------CCTTSH-----HHHHHHHHHHHHHHHTT
T ss_pred hhhcc-hhhccCCCCEEEEcCCCCCCeeeccChhhhhh--------------CCHHHH-----HHHHHHHHHHHHHHHHh
Confidence 22221 1155688999996 3344444444542111 000000 01111224578888889
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||+|+...+..
T Consensus 379 LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 379 VKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEEEEEEESCC
T ss_pred cCCCcEEEEEeCCC
Confidence 99999999888654
No 212
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.24 E-value=0.0066 Score=56.62 Aligned_cols=126 Identities=12% Similarity=0.010 Sum_probs=64.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~g 139 (371)
...+|+|+|||+|..|..+.+ .... .-+|+..|.-..--..+=+.+. -.+-.+..+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~---------~~~~------------~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~ 141 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQ---------LMKN------------KGTIVAVEISKTRTKALKSNINRMGVLNTIIINA 141 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHH---------HTTT------------CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CcCEEEEeCCCccHHHHHHHH---------HcCC------------CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 346999999999999988762 1110 1256666665443332222211 111123333
Q ss_pred cCCCccccc-CCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017439 140 VPGSFHGRL-FPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARA 215 (371)
Q Consensus 140 vpgSFy~rL-fP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra 215 (371)
....+-..+ .+.+++|+|++.. .+..+.+.|. |+ ..-.....++...+|+.-.
T Consensus 142 D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~---------~~--------------~~~~~~~~~~~~~~l~~~~ 198 (274)
T 3ajd_A 142 DMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN---------VS--------------EEDIKYCSLRQKELIDIGI 198 (274)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEEECCC-----------------------------------HHHHTGGGTCHHHHHHHHH
T ss_pred ChHhcchhhhhccccCCEEEEcCCCCCCcccccCCC---------CC--------------HHHHHHHHHHHHHHHHHHH
Confidence 211111000 0256899998752 2223332220 01 0111223456677899888
Q ss_pred hhcccCceEEEEecCcC
Q 017439 216 QELVPGGLLLLLTPTIR 232 (371)
Q Consensus 216 ~EL~pGG~lvl~~~gr~ 232 (371)
+-|+|||+|++..+...
T Consensus 199 ~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 199 DLLKKDGELVYSTCSME 215 (274)
T ss_dssp HHEEEEEEEEEEESCCC
T ss_pred HhCCCCCEEEEEECCCC
Confidence 99999999999886553
No 213
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.23 E-value=0.0015 Score=60.97 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=64.0
Q ss_pred CCceEEeeecCCCCcccHHHHH-----------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQ-----------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP 130 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~-----------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~ 130 (371)
..+-+|+|+|||.|+.++..+. ..|+.+++ ..... .+ ++.+...|++...
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~-~~~~~------g~---~~~~~v~D~~~~~--------- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITP-FAREK------DW---DFTFALQDVLCAP--------- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHH-HHHHT------TC---EEEEEECCTTTSC---------
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHH-HHHhc------CC---CceEEEeecccCC---------
Confidence 3467999999999999998762 45555555 33221 12 4566666766554
Q ss_pred CCcceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeec-------CCCHHHHHHHHHHH
Q 017439 131 LSKKYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCS-------GFEKEVAEAYSAQF 203 (371)
Q Consensus 131 ~~~~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~-------~~~~~~~~ay~~Q~ 203 (371)
|+.+.|++.++=++|-|.+.........-.++|.+.|.++ +.++...+.|..+|
T Consensus 165 -------------------~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~ 225 (253)
T 3frh_A 165 -------------------PAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWF 225 (253)
T ss_dssp -------------------CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHH
T ss_pred -------------------CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHH
Confidence 6668999999999999976555432222235566666652 23444556666554
Q ss_pred Hhh
Q 017439 204 KND 206 (371)
Q Consensus 204 ~~D 206 (371)
+++
T Consensus 226 e~~ 228 (253)
T 3frh_A 226 EGG 228 (253)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 214
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.16 E-value=0.025 Score=57.41 Aligned_cols=127 Identities=16% Similarity=0.213 Sum_probs=72.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~g 139 (371)
...+|+|+|||+|.-|+.+. + ... + .-+|+.+|.-..-...+=+.+. -.+-.+..+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA--------~-~~~---------~---~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~ 175 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQIS--------A-RMN---------N---EGAILANEFSASRVKVLHANISRCGISNVALTHF 175 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHH--------H-HTT---------T---CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 34699999999999999877 2 211 1 1257777776655444433321 112224444
Q ss_pred cCCCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 140 VPGSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
....+-. .+++++|.|++ ++...-+.+.|..... -+++.... ..+.-..+|+.=++
T Consensus 176 D~~~~~~--~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~---------------~~~~~~~~----l~~~q~~iL~~a~~ 234 (479)
T 2frx_A 176 DGRVFGA--AVPEMFDAILLDAPCSGEGVVRKDPDALKN---------------WSPESNQE----IAATQRELIDSAFH 234 (479)
T ss_dssp CSTTHHH--HSTTCEEEEEEECCCCCGGGGGTCTTSSSS---------------CCHHHHHH----HHHHHHHHHHHHHH
T ss_pred CHHHhhh--hccccCCEEEECCCcCCcccccCCHHHHhh---------------cCHhHHHH----HHHHHHHHHHHHHH
Confidence 4333211 13578999998 3444444555542211 11222221 22233457888888
Q ss_pred hcccCceEEEEecCc
Q 017439 217 ELVPGGLLLLLTPTI 231 (371)
Q Consensus 217 EL~pGG~lvl~~~gr 231 (371)
-|+|||+||..++..
T Consensus 235 ~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 235 ALRPGGTLVYSTCTL 249 (479)
T ss_dssp HEEEEEEEEEEESCC
T ss_pred hcCCCCEEEEecccC
Confidence 999999999988654
No 215
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.16 E-value=0.006 Score=62.02 Aligned_cols=20 Identities=30% Similarity=0.589 Sum_probs=16.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+..+|+|+|||+|..++.+.
T Consensus 158 ~~~~VLDiGcGtG~la~~la 177 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAA 177 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHH
T ss_pred CCCEEEEecCcccHHHHHHH
Confidence 34699999999999777554
No 216
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.14 E-value=0.023 Score=51.07 Aligned_cols=20 Identities=10% Similarity=0.248 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
...+|+|+|||+|..++.+.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~ 110 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLS 110 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHH
Confidence 34699999999999998877
No 217
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.13 E-value=0.0021 Score=57.36 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+..+|+|+|||+|..|+.+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la 77 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLA 77 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHH
Confidence 35799999999999999877
No 218
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.13 E-value=0.0035 Score=55.80 Aligned_cols=19 Identities=26% Similarity=0.301 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 65 ~~~vLdiG~G~G~~~~~la 83 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMG 83 (225)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHH
Confidence 4599999999999999877
No 219
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.06 E-value=0.011 Score=58.97 Aligned_cols=126 Identities=17% Similarity=0.148 Sum_probs=73.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--CcceeeeccC
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGVP 141 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gvp 141 (371)
..+|+|+|||+|..|..+. + .. | .-+|+.+|.-..-...+-+.+.. ....+..+..
T Consensus 247 g~~VLDlgaG~G~~t~~la--------~-~~----------~---~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~ 304 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHIL--------E-VA----------P---EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304 (429)
T ss_dssp TCEEEEESCTTCHHHHHHH--------H-HC----------T---TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT
T ss_pred cCeEEEECCCchHHHHHHH--------H-Hc----------C---CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCch
Confidence 4699999999999999877 2 11 1 23677888766654444333311 1123334432
Q ss_pred CCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 142 GSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 142 gSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
..+ ...++++++|.|++ ++.+..+.+.|..... .++..+ ....+....+|+.=.+-|
T Consensus 305 ~~~-~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~--------------~~~~~~-----~~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 305 RYP-SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL--------------RRDRDI-----PELAQLQSEILDAIWPHL 364 (429)
T ss_dssp TCT-HHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHH--------------CCTTHH-----HHHHHHHHHHHHHHGGGE
T ss_pred hhc-hhhcccCCCCEEEEeCCCCcccccCCCcchhhc--------------CCHHHH-----HHHHHHHHHHHHHHHHhc
Confidence 222 11246689999997 4455555555542211 011111 112233356788888999
Q ss_pred ccCceEEEEecCc
Q 017439 219 VPGGLLLLLTPTI 231 (371)
Q Consensus 219 ~pGG~lvl~~~gr 231 (371)
+|||+|++..+..
T Consensus 365 kpGG~lvystcs~ 377 (429)
T 1sqg_A 365 KTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEEEEEESCC
T ss_pred CCCCEEEEEECCC
Confidence 9999999988654
No 220
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.00 E-value=0.0031 Score=57.90 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=59.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCch---hhhhhcCCCC-cceeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDF---NTLFKSVPLS-KKYFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDF---n~lF~~l~~~-~~~f~~g 139 (371)
+-+|+|+|||+|..|+.+. + .+. + .-+|+..|.-..-. ...++...-. +--|..|
T Consensus 61 ~~~VLDiG~G~G~~t~~la--------~-~~~---------~---~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 119 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMS--------L-ALP---------D---DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG 119 (242)
T ss_dssp CSEEEEEESCCSHHHHHHH--------H-TSC---------T---TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES
T ss_pred cCEEEEeeCCcCHHHHHHH--------H-hCC---------C---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 4699999999999999877 3 221 1 22566666654321 1122222211 2234444
Q ss_pred cCCCcccccCC---CCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 140 VPGSFHGRLFP---ESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 140 vpgSFy~rLfP---~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
....+...+.. ++++|++++... + .+...+|+.-.+
T Consensus 120 da~~~l~~~~~~~~~~~fD~V~~d~~-------~----------------------------------~~~~~~l~~~~~ 158 (242)
T 3r3h_A 120 PALDTLHSLLNEGGEHQFDFIFIDAD-------K----------------------------------TNYLNYYELALK 158 (242)
T ss_dssp CHHHHHHHHHHHHCSSCEEEEEEESC-------G----------------------------------GGHHHHHHHHHH
T ss_pred CHHHHHHHHhhccCCCCEeEEEEcCC-------h----------------------------------HHhHHHHHHHHH
Confidence 42221112211 588999987532 0 223336666678
Q ss_pred hcccCceEEEEecC
Q 017439 217 ELVPGGLLLLLTPT 230 (371)
Q Consensus 217 EL~pGG~lvl~~~g 230 (371)
-|+|||.+++...-
T Consensus 159 ~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 159 LVTPKGLIAIDNIF 172 (242)
T ss_dssp HEEEEEEEEEECSS
T ss_pred hcCCCeEEEEECCc
Confidence 99999999996643
No 221
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.92 E-value=0.016 Score=54.46 Aligned_cols=19 Identities=21% Similarity=0.316 Sum_probs=16.8
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la 142 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVA 142 (284)
T ss_dssp CCEEEEESCTTSHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHH
Confidence 3589999999999998877
No 222
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.89 E-value=0.11 Score=47.77 Aligned_cols=19 Identities=11% Similarity=0.219 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||||..++.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la 40 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLL 40 (230)
T ss_dssp TEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHH
Confidence 4799999999999999887
No 223
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.87 E-value=0.058 Score=51.97 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=22.5
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
.+|+..+|+.-.+-|+|||.++++....
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 3567778888889999999988877554
No 224
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.81 E-value=0.025 Score=52.70 Aligned_cols=102 Identities=10% Similarity=0.034 Sum_probs=59.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC---CCCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV---PLSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l---~~~~~~f~~gv 140 (371)
.-+|+|+|||+|..|+.+. . ++. .-+|+..|+-..-...+=+.+ .-.+-.|..|.
T Consensus 120 ~~~VLDlgcG~G~~s~~la--------~-~~~-------------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d 177 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLA--------K-YSK-------------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILAD 177 (272)
T ss_dssp TCEEEETTCTTTTTHHHHH--------H-HTC-------------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESC
T ss_pred CCEEEEecCcCCHHHHHHH--------H-hCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 4689999999999999887 2 211 125667676433222221111 11122455555
Q ss_pred CCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhccc
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQELVP 220 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL~p 220 (371)
...+ .. .+++|++++.... . ...+|..-.+-|+|
T Consensus 178 ~~~~-~~---~~~~D~Vi~d~p~--------~----------------------------------~~~~l~~~~~~Lkp 211 (272)
T 3a27_A 178 NRDV-EL---KDVADRVIMGYVH--------K----------------------------------THKFLDKTFEFLKD 211 (272)
T ss_dssp GGGC-CC---TTCEEEEEECCCS--------S----------------------------------GGGGHHHHHHHEEE
T ss_pred hHHc-Cc---cCCceEEEECCcc--------c----------------------------------HHHHHHHHHHHcCC
Confidence 4333 11 5689999876322 1 11145555678999
Q ss_pred CceEEEEecCcCC
Q 017439 221 GGLLLLLTPTIRD 233 (371)
Q Consensus 221 GG~lvl~~~gr~~ 233 (371)
||++++......+
T Consensus 212 gG~l~~s~~~~~~ 224 (272)
T 3a27_A 212 RGVIHYHETVAEK 224 (272)
T ss_dssp EEEEEEEEEEEGG
T ss_pred CCEEEEEEcCccc
Confidence 9999988866543
No 225
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.78 E-value=0.052 Score=53.02 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=24.1
Q ss_pred HHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 202 QFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 202 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
...+++..+|..-.+-|+|||.+++....
T Consensus 299 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 299 RAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 34567788999999999999999988754
No 226
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=95.65 E-value=0.01 Score=60.14 Aligned_cols=127 Identities=14% Similarity=0.128 Sum_probs=70.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC--Ccceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL--SKKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~--~~~~f~~gv 140 (371)
...+|+|+|||+|..|+.+. . .... .-+|+.+|+-..--..+=+.+.. -.-.+..+.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA--------~-~~~~------------~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~D 159 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLA--------A-RMGG------------KGLLLANEVDGKRVRGLLENVERWGAPLAVTQAP 159 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------H-HTTT------------CSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSC
T ss_pred CCCEEEEEcCCcCHHHHHHH--------H-hCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECC
Confidence 35799999999999999887 2 2211 12577888766554444333211 012233443
Q ss_pred CCCcccccCCCCceeEEEe---cCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 141 PGSFHGRLFPESSLHVAHT---SNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~S---s~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
+..+-. ++++++|.|++ ++..--+.+.|..... .++ +..+ ...+.-..+|+.=.+-
T Consensus 160 a~~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~--------------~~~-~~~~----~l~~~Q~~iL~~a~~~ 218 (464)
T 3m6w_A 160 PRALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAARH--------------WGP-SAPK----RMAEVQKALLAQASRL 218 (464)
T ss_dssp HHHHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSGGG--------------CCT-THHH----HHHHHHHHHHHHHHTT
T ss_pred HHHhhh--hccccCCEEEECCCcCCccccccChHHhhh--------------cCH-HHHH----HHHHHHHHHHHHHHHh
Confidence 222211 13678999986 2233333444442211 011 1111 1223335678888899
Q ss_pred cccCceEEEEecCc
Q 017439 218 LVPGGLLLLLTPTI 231 (371)
Q Consensus 218 L~pGG~lvl~~~gr 231 (371)
|+|||+||..++..
T Consensus 219 LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 219 LGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEEEEEEEESCC
T ss_pred cCCCcEEEEEeccC
Confidence 99999999987654
No 227
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.41 E-value=0.042 Score=52.73 Aligned_cols=127 Identities=16% Similarity=0.152 Sum_probs=68.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC--CCcceeeec
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP--LSKKYFATG 139 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~--~~~~~f~~g 139 (371)
....+|+|.|||+|..++.+.+. +.. .. .+ ..+++..|+-..-....-..+. ....-+..|
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~----~~~-~~---------~~---~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~ 191 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQ----LEL-KG---------DV---DVHASGVDVDDLLISLALVGADLQRQKMTLLHQ 191 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHH----HHT-TS---------SC---EEEEEEEESCHHHHHHHHHHHHHHTCCCEEEES
T ss_pred CCCCEEEeCCCCccHHHHHHHHH----HHH-hc---------CC---CceEEEEECCHHHHHHHHHHHHhCCCCceEEEC
Confidence 35689999999999988877632 222 10 01 3567777764433221111110 001122222
Q ss_pred cCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHH-HHHHHHHhhc
Q 017439 140 VPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIE-SFLNARAQEL 218 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~-~FL~~Ra~EL 218 (371)
. +.. ..+..++|+++++--++|.... .....-.+...+|. .|.. .|+..-.+-|
T Consensus 192 D---~l~-~~~~~~fD~Ii~NPPfg~~~~~--~~~~~~~~~~~~g~-------------------~~~~~~~l~~~~~~L 246 (344)
T 2f8l_A 192 D---GLA-NLLVDPVDVVISDLPVGYYPDD--ENAKTFELCREEGH-------------------SFAHFLFIEQGMRYT 246 (344)
T ss_dssp C---TTS-CCCCCCEEEEEEECCCSEESCH--HHHTTSTTCCSSSC-------------------EEHHHHHHHHHHHTE
T ss_pred C---CCC-ccccCCccEEEECCCCCCcCch--hhhhhccccCCCCc-------------------chHHHHHHHHHHHHh
Confidence 2 222 2356789999999888774321 11110001001111 1222 4788778899
Q ss_pred ccCceEEEEecC
Q 017439 219 VPGGLLLLLTPT 230 (371)
Q Consensus 219 ~pGG~lvl~~~g 230 (371)
+|||+++++++.
T Consensus 247 k~gG~~~~v~p~ 258 (344)
T 2f8l_A 247 KPGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEEEEEEG
T ss_pred CCCCEEEEEECc
Confidence 999999999854
No 228
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=95.35 E-value=0.0053 Score=56.49 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
++-+|+|+|||+|..|+.+.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la 98 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATA 98 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHH
Confidence 35699999999999999877
No 229
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.33 E-value=0.0087 Score=53.35 Aligned_cols=20 Identities=30% Similarity=0.293 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+..+|+|+|||+|..|+.+.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la 88 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALA 88 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHH
Confidence 34699999999999998877
No 230
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=95.13 E-value=0.026 Score=57.07 Aligned_cols=127 Identities=15% Similarity=0.103 Sum_probs=69.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeec
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATG 139 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~g 139 (371)
...+|+|+|||+|.-|+.+. . .... .-+|+.+|.-..--..+=+.+. -.+-.+..+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA--------~-~~~~------------~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~ 163 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLA--------A-QMKG------------KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH 163 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------H-HHTT------------CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC
T ss_pred CCCEEEEECCCcCHHHHHHH--------H-HcCC------------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 34799999999999999877 2 2211 1257788876654443333321 112234444
Q ss_pred cCCCcccccCCCCceeEEEecC---CccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHh
Q 017439 140 VPGSFHGRLFPESSLHVAHTSN---ALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQ 216 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss~---alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~ 216 (371)
.+..+-. .+++++|.|++.. .+.-+.+.|..... .+. + ......+.-..+|+.=.+
T Consensus 164 Da~~l~~--~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~--------------~~~-~----~~~~l~~~Q~~iL~~a~~ 222 (456)
T 3m4x_A 164 APAELVP--HFSGFFDRIVVDAPCSGEGMFRKDPNAIKE--------------WTE-E----SPLYCQKRQQEILSSAIK 222 (456)
T ss_dssp CHHHHHH--HHTTCEEEEEEECCCCCGGGTTTCHHHHHH--------------CCT-T----HHHHHHHHHHHHHHHHHH
T ss_pred CHHHhhh--hccccCCEEEECCCCCCccccccCHHHhhh--------------cCH-H----HHHHHHHHHHHHHHHHHH
Confidence 4333211 1357899998732 22222222321110 001 1 112223334568888889
Q ss_pred hcccCceEEEEecCc
Q 017439 217 ELVPGGLLLLLTPTI 231 (371)
Q Consensus 217 EL~pGG~lvl~~~gr 231 (371)
-|+|||+||..++..
T Consensus 223 ~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 223 MLKNKGQLIYSTCTF 237 (456)
T ss_dssp TEEEEEEEEEEESCC
T ss_pred hcCCCcEEEEEEeec
Confidence 999999999887654
No 231
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.13 E-value=0.0069 Score=55.20 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
++-+|+|+|||+|..|+.+.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la 89 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTA 89 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 35699999999999999887
No 232
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=95.10 E-value=0.016 Score=52.40 Aligned_cols=19 Identities=11% Similarity=0.258 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 73 ~~~vLdiG~G~G~~~~~la 91 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMA 91 (232)
T ss_dssp CCEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH
Confidence 4599999999999998877
No 233
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=94.69 E-value=0.044 Score=47.75 Aligned_cols=75 Identities=12% Similarity=0.005 Sum_probs=40.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
...+|+|+|||+|..++.+. . . + .-+|+..|+-..--...=+.++ +--|..+.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~--------~-~-----------~---~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d-- 103 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSY--------L-L-----------G---AESVTAFDIDPDAIETAKRNCG--GVNFMVAD-- 103 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHH--------H-T-----------T---BSEEEEEESCHHHHHHHHHHCT--TSEEEECC--
T ss_pred CCCEEEEEeCCccHHHHHHH--------H-c-----------C---CCEEEEEECCHHHHHHHHHhcC--CCEEEECc--
Confidence 45699999999999888765 2 1 0 1146666654332222212222 22233333
Q ss_pred CcccccCCCCceeEEEecCCccccCC
Q 017439 143 SFHGRLFPESSLHVAHTSNALPWLSK 168 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHWLS~ 168 (371)
+.. +| +++|+++++-.+||+++
T Consensus 104 -~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 104 -VSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp -GGG--CC-CCEEEEEECCCC-----
T ss_pred -HHH--CC-CCeeEEEECCCchhccC
Confidence 222 24 78999999999999654
No 234
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=94.68 E-value=0.011 Score=52.08 Aligned_cols=19 Identities=11% Similarity=-0.008 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..|+.+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la 75 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFA 75 (210)
T ss_dssp CSEEEEESCGGGHHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHH
Confidence 4689999999999998876
No 235
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.62 E-value=0.12 Score=47.94 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..++.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la 40 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAV 40 (244)
T ss_dssp SEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHH
Confidence 4799999999999999887
No 236
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=94.51 E-value=0.078 Score=52.39 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=23.5
Q ss_pred HHHhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 202 QFKNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 202 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
...+|+..+++.-.+-|+|||+|++..+.
T Consensus 300 ~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 300 AMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 44567788999999999999999966644
No 237
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=94.30 E-value=0.066 Score=49.83 Aligned_cols=19 Identities=11% Similarity=0.258 Sum_probs=16.5
Q ss_pred HHHHHHhhcccCceEEEEe
Q 017439 210 FLNARAQELVPGGLLLLLT 228 (371)
Q Consensus 210 FL~~Ra~EL~pGG~lvl~~ 228 (371)
|++.-.+-|+|||+|++..
T Consensus 153 ~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEc
Confidence 7778888999999999864
No 238
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=94.27 E-value=0.089 Score=50.01 Aligned_cols=21 Identities=14% Similarity=0.056 Sum_probs=18.4
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+..
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~ 70 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAK 70 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CcCEEEEECCCchHHHHHHHh
Confidence 346899999999999999885
No 239
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=94.20 E-value=0.2 Score=46.90 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHH
T ss_pred CCCEEEEEcCcccHHHHHHHh
Confidence 346899999999999998874
No 240
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=93.83 E-value=0.15 Score=49.92 Aligned_cols=30 Identities=13% Similarity=-0.027 Sum_probs=24.4
Q ss_pred HHHhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 202 QFKNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 202 Q~~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
...+++..+|..-.+-|+|||.|++.....
T Consensus 309 ~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 309 AGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 345778889999999999999998887543
No 241
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=93.61 E-value=0.14 Score=50.28 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=21.9
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecC
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.+++..+++.-.+-|+|||.+++....
T Consensus 307 ~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 307 SKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 356667888888999999999988754
No 242
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=93.35 E-value=0.36 Score=45.46 Aligned_cols=70 Identities=11% Similarity=0.057 Sum_probs=42.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCC---Ccc-eeeec
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPL---SKK-YFATG 139 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~---~~~-~f~~g 139 (371)
.-+|+|+|||+|+.|+.+. . .. . -.|+.+|+-..-...+=+++.. ... .+..+
T Consensus 126 g~~VlD~~aG~G~~~i~~a--------~--~g--------~-----~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~ 182 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIA--------V--YG--------K-----AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp TCEEEETTCTTTTTTHHHH--------H--HT--------C-----CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCEEEEecCcCcHHHHHHH--------H--hc--------C-----CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeC
Confidence 4689999999999999877 2 11 1 1578888766655555444321 112 23445
Q ss_pred cCCCcccccCCCCceeEEEec
Q 017439 140 VPGSFHGRLFPESSLHVAHTS 160 (371)
Q Consensus 140 vpgSFy~rLfP~~Svd~~~Ss 160 (371)
... .+.+.+.+|.++..
T Consensus 183 D~~----~~~~~~~~D~Vi~~ 199 (278)
T 3k6r_A 183 DNR----DFPGENIADRILMG 199 (278)
T ss_dssp CTT----TCCCCSCEEEEEEC
T ss_pred cHH----HhccccCCCEEEEC
Confidence 533 23466778887743
No 243
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.25 E-value=0.16 Score=47.01 Aligned_cols=52 Identities=19% Similarity=0.390 Sum_probs=39.0
Q ss_pred CceEEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhh
Q 017439 63 STFKIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTL 125 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~l 125 (371)
..-+|+|+|||+|..|..+.. ..++.+++ ++.. .+ .++++..|...-||..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~-~~~~-------~~---~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQK-KYNQ-------QK---NITIYQNDALQFDFSSV 92 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHH-HHTT-------CT---TEEEEESCTTTCCGGGS
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHH-HHhh-------CC---CcEEEEcchHhCCHHHh
Confidence 346899999999999999886 55666666 5432 23 57899999988886654
No 244
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=93.20 E-value=0.35 Score=50.81 Aligned_cols=47 Identities=21% Similarity=0.251 Sum_probs=29.5
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHH
Q 017439 27 AKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQN 84 (371)
Q Consensus 27 ~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~ 84 (371)
-+...+|+++..+.++. ..-.. + ..+..+|+|+|||+|+.+...+.+
T Consensus 332 vKy~~Ye~AI~~Al~d~--------~~~~~-~--~~~~~vVldVGaGrGpLv~~al~A 378 (637)
T 4gqb_A 332 IKYSQYQQAIYKCLLDR--------VPEEE-K--DTNVQVLMVLGAGRGPLVNASLRA 378 (637)
T ss_dssp HHHHHHHHHHHHHHHHH--------SCGGG-T--TTCEEEEEEESCTTSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHh--------hhhcc-c--cCCCcEEEEECCCCcHHHHHHHHH
Confidence 45566666665544333 21111 1 356789999999999998777643
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.02 E-value=0.32 Score=51.65 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=23.3
Q ss_pred HhhHHHHHHHHHhhcccCceEEEEecCc
Q 017439 204 KNDIESFLNARAQELVPGGLLLLLTPTI 231 (371)
Q Consensus 204 ~~D~~~FL~~Ra~EL~pGG~lvl~~~gr 231 (371)
.+|...+++.-.+-|+|||+|++....+
T Consensus 633 ~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 633 QRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 4677788988899999999999887654
No 246
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=92.94 E-value=0.088 Score=54.29 Aligned_cols=21 Identities=24% Similarity=0.515 Sum_probs=18.3
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
.++.||+|+|||.|..|..+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la 85 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA 85 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHH
Confidence 457899999999999888776
No 247
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=92.66 E-value=1.8 Score=40.69 Aligned_cols=19 Identities=32% Similarity=0.592 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|||||.|.-|..++
T Consensus 75 ~~~VLDLGaAPGGWSQvAa 93 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAA 93 (277)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH
Confidence 3589999999999998776
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=92.44 E-value=0.11 Score=49.10 Aligned_cols=20 Identities=30% Similarity=0.506 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-+|+|+|||+|..|..+.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La 61 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLL 61 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHT
T ss_pred CcCEEEEEcCcCcHHHHHHH
Confidence 34699999999999999876
No 249
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=91.96 E-value=0.83 Score=44.19 Aligned_cols=102 Identities=13% Similarity=-0.021 Sum_probs=58.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCC---CCcceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVP---LSKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~---~~~~~f~~gv 140 (371)
..+|+|+| |+|..++.+. . . .| .-+|+.-|+...--...=+.+. -.+--|..|.
T Consensus 173 ~~~VLDlG-G~G~~~~~la--------~-~----------~~---~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D 229 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALM--------L-S----------GL---PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFD 229 (373)
T ss_dssp TCEEEEES-CTTCHHHHHH--------H-H----------TC---CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHH--------H-h----------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEECh
Confidence 47999999 9999998765 2 1 11 2367777774332111111111 0122244443
Q ss_pred CCCcccccC--CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHHHhhc
Q 017439 141 PGSFHGRLF--PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNARAQEL 218 (371)
Q Consensus 141 pgSFy~rLf--P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~Ra~EL 218 (371)
+...|- +++++|+|+++..+|+. +...||+.-.+-|
T Consensus 230 ---~~~~l~~~~~~~fD~Vi~~~p~~~~---------------------------------------~~~~~l~~~~~~L 267 (373)
T 2qm3_A 230 ---LRKPLPDYALHKFDTFITDPPETLE---------------------------------------AIRAFVGRGIATL 267 (373)
T ss_dssp ---TTSCCCTTTSSCBSEEEECCCSSHH---------------------------------------HHHHHHHHHHHTB
T ss_pred ---hhhhchhhccCCccEEEECCCCchH---------------------------------------HHHHHHHHHHHHc
Confidence 222121 24689999997654431 1255788888999
Q ss_pred ccCceE-EEEecC
Q 017439 219 VPGGLL-LLLTPT 230 (371)
Q Consensus 219 ~pGG~l-vl~~~g 230 (371)
+|||++ ++.+..
T Consensus 268 kpgG~~~~~~~~~ 280 (373)
T 2qm3_A 268 KGPRCAGYFGITR 280 (373)
T ss_dssp CSTTCEEEEEECT
T ss_pred ccCCeEEEEEEec
Confidence 999965 665544
No 250
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=91.86 E-value=0.28 Score=44.78 Aligned_cols=19 Identities=11% Similarity=0.050 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||||..++.+.
T Consensus 16 g~~VlDIGtGsG~l~i~la 34 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELV 34 (225)
T ss_dssp TEEEEEETCSTTHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHH
Confidence 4799999999999999887
No 251
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=91.73 E-value=0.21 Score=43.35 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=43.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCC--cceeeecc
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLS--KKYFATGV 140 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~--~~~f~~gv 140 (371)
...+|+|+|||+|..++.+. . . .+ . +++..|.-..--...=+.+... +--+..+.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~--------~-~----------~~---~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 105 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGAL--------L-L----------GA---K-EVICVEVDKEAVDVLIENLGEFKGKFKVFIGD 105 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H-T----------TC---S-EEEEEESCHHHHHHHHHHTGGGTTSEEEEESC
T ss_pred CcCEEEEeeCCCCHHHHHHH--------H-c----------CC---C-EEEEEECCHHHHHHHHHHHHHcCCCEEEEECc
Confidence 34689999999999888766 2 1 00 1 4666665433222222222111 12233333
Q ss_pred CCCcccccCCCCceeEEEecCCccccCC
Q 017439 141 PGSFHGRLFPESSLHVAHTSNALPWLSK 168 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~alHWLS~ 168 (371)
+.. +| +++|+++++-.+|+.++
T Consensus 106 ---~~~--~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 106 ---VSE--FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp ---GGG--CC-CCCSEEEECCCCSSSST
T ss_pred ---hHH--cC-CCCCEEEEcCCCccccC
Confidence 222 23 48999999999888653
No 252
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=91.59 E-value=0.62 Score=47.91 Aligned_cols=143 Identities=13% Similarity=0.198 Sum_probs=70.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcC--CC-Ccceeeecc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSV--PL-SKKYFATGV 140 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l--~~-~~~~f~~gv 140 (371)
..+|+|.+||+|..-+.+...+.+.-........ .. .- .++++..|+-..-....-..+ .. ..+ +-.-.
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~--~~--~~---~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~-i~i~~ 316 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNAS--EQ--KK---QISVYGQESNPTTWKLAAMNMVIRGIDFN-FGKKN 316 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHH--HH--GG---GEEEEECCCCHHHHHHHHHHHHHTTCCCB-CCSSS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchH--HH--hh---hceEEEEeCCHHHHHHHHHHHHHhCCCcc-cceec
Confidence 3599999999998777766554432221000000 00 00 357888777554432221111 10 111 11122
Q ss_pred CCCcccccCCCCceeEEEecCCc---cccCCCCccccCCCCCCcCCCc---eeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 141 PGSFHGRLFPESSLHVAHTSNAL---PWLSKIPKEITNSNSPAWNRGH---ILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 141 pgSFy~rLfP~~Svd~~~Ss~al---HWLS~vP~~l~d~~~~~~nkg~---i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
+-+|....++...+|+|+++=-+ .|-.. .+... +-|.-|. .... .++.- ..|+ .|+..-
T Consensus 317 gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~---~~~~d--~r~~~g~~~~~~~~-~~~~~--------~~~~-~Fl~~~ 381 (544)
T 3khk_A 317 ADSFLDDQHPDLRADFVMTNPPFNMKDWWHE---KLADD--PRWTINTNGEKRIL-TPPTG--------NANF-AWMLHM 381 (544)
T ss_dssp CCTTTSCSCTTCCEEEEEECCCSSCCSCCCG---GGTTC--GGGEECCC--CEEC-CCCTT--------CTHH-HHHHHH
T ss_pred cchhcCcccccccccEEEECCCcCCccccch---hhhhh--hhhhcCcccccccc-cCCCc--------chhH-HHHHHH
Confidence 33555666778999999997332 36321 11110 0000000 0000 00000 1122 489999
Q ss_pred HhhcccCceEEEEec
Q 017439 215 AQELVPGGLLLLLTP 229 (371)
Q Consensus 215 a~EL~pGG~lvl~~~ 229 (371)
.+-|+|||+++++++
T Consensus 382 l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 382 LYHLAPTGSMALLLA 396 (544)
T ss_dssp HHTEEEEEEEEEEEE
T ss_pred HHHhccCceEEEEec
Confidence 999999999999985
No 253
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=91.56 E-value=0.28 Score=47.98 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHhhcccCceEEEEecC
Q 017439 205 NDIESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 205 ~D~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
+++..++..-.+-|+|||.+++....
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 56667888888999999999988743
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=91.12 E-value=0.61 Score=46.34 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=18.7
Q ss_pred HHHHHHHhhcccCceEEEEecC
Q 017439 209 SFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
.||+.-.+-|+|||+++++++.
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHhccCCEEEEEECC
Confidence 5788888899999999999853
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=90.83 E-value=0.099 Score=47.81 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHHH
Confidence 346899999999999998874
No 256
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=90.73 E-value=0.22 Score=47.71 Aligned_cols=18 Identities=17% Similarity=0.235 Sum_probs=16.0
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|..|+. .
T Consensus 196 ~~~VLDlg~G~G~~~l~-a 213 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-C 213 (336)
T ss_dssp TCEEEETTCTTSHHHHH-T
T ss_pred CCEEEEccCccCHHHHh-c
Confidence 46899999999999987 6
No 257
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=90.47 E-value=1.4 Score=41.58 Aligned_cols=19 Identities=37% Similarity=0.604 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|||||.|..|..++
T Consensus 91 ~~~VLDLGaAPGGWsQvAa 109 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAA 109 (282)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHH
Confidence 4589999999999998776
No 258
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=90.40 E-value=0.59 Score=45.34 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=16.3
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|+|||+|..++.+.
T Consensus 218 ~~~vLD~gCGsG~~~i~~a 236 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELA 236 (373)
T ss_dssp SCCEEETTCTTCHHHHHHH
T ss_pred CCEEEEccCcCcHHHHHHH
Confidence 3679999999999888776
No 259
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=90.07 E-value=1.8 Score=46.69 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=20.8
Q ss_pred HHHHHHHHHhhcccCceEEEEecC
Q 017439 207 IESFLNARAQELVPGGLLLLLTPT 230 (371)
Q Consensus 207 ~~~FL~~Ra~EL~pGG~lvl~~~g 230 (371)
...|+..-.+-|+|||+++++++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 556899989999999999999964
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=89.50 E-value=0.43 Score=44.68 Aligned_cols=47 Identities=13% Similarity=0.194 Sum_probs=31.7
Q ss_pred EEeeecCCCCcccHHHHH------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhh
Q 017439 66 KIADLGCSTGPNTFIAMQ------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNT 124 (371)
Q Consensus 66 ~IaDlGCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~ 124 (371)
+|+|+|||+|..|..+.. ..++.+++ ++. .. .++++..|.-.-||..
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~-~~~--------~~---~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEE-TLS--------GL---PVRLVFQDALLYPWEE 107 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTT--------TS---SEEEEESCGGGSCGGG
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHH-hcC--------CC---CEEEEECChhhCChhh
Confidence 999999999999999886 33444444 332 11 4677777776666543
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=89.46 E-value=0.32 Score=47.67 Aligned_cols=21 Identities=14% Similarity=0.018 Sum_probs=18.2
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
+++-+|+|+|||+|..+..++
T Consensus 187 p~pkrVL~IGgG~G~~arell 207 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIV 207 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHH
Confidence 467899999999999887766
No 262
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=89.43 E-value=1.3 Score=43.92 Aligned_cols=20 Identities=25% Similarity=0.291 Sum_probs=17.5
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+..
T Consensus 287 ~~~VLDlgcG~G~~~~~la~ 306 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLAT 306 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHT
T ss_pred CCEEEECCCCCCHHHHHHHh
Confidence 46899999999999998873
No 263
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=89.30 E-value=1.5 Score=44.95 Aligned_cols=130 Identities=13% Similarity=0.240 Sum_probs=67.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhc-----CCCCcceee
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKS-----VPLSKKYFA 137 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~-----l~~~~~~f~ 137 (371)
...+|+|.+||+|...+.+... ... .+ ..+++..|+-..-..-.-.. +.....-+.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~---------l~~-------~~---~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~ 281 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRY---------SRQ-------PQ---TVVYFGQELNTSTYNLARMNMILHGVPIENQFLH 281 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHH---------CSC-------TT---TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCEEeecccchhHHHHHHHHH---------HHh-------cc---CceEEEEECcHHHHHHHHHHHHHcCCCcCccceE
Confidence 4679999999999987776632 111 11 34677776654433222111 110111111
Q ss_pred eccCCCccc--ccCCCCceeEEEec--CCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 138 TGVPGSFHG--RLFPESSLHVAHTS--NALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 138 ~gvpgSFy~--rLfP~~Svd~~~Ss--~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
.| -+|.. ..++...+|+|+++ +...|-.. .....+.....| |.+. ..+ ..|+ .|+..
T Consensus 282 ~g--DtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d~rf~~~--G~~~-~~s------------~~~~-~Fl~~ 342 (542)
T 3lkd_A 282 NA--DTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDDPRFSPF--GKLA-PKS------------KADF-AFLLH 342 (542)
T ss_dssp ES--CTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGSTTTGGG--SSCC-CTT------------CCHH-HHHHH
T ss_pred ec--ceecccccccccccccEEEecCCcCCccccc-hhhhhhhhhhhh--hhcC-CCc------------hhhH-HHHHH
Confidence 11 23333 23567899999998 55566211 111112111001 1000 011 1223 48888
Q ss_pred HHhhcc-cCceEEEEecC
Q 017439 214 RAQELV-PGGLLLLLTPT 230 (371)
Q Consensus 214 Ra~EL~-pGG~lvl~~~g 230 (371)
-.+-|+ |||+++++++.
T Consensus 343 ~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 343 GYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHHTBCTTTCEEEEEEET
T ss_pred HHHHhCCCceeEEEEecc
Confidence 889999 99999999864
No 264
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=87.89 E-value=6.2 Score=37.49 Aligned_cols=21 Identities=33% Similarity=0.570 Sum_probs=18.4
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
....+++|||||.|..|..++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~ 100 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAA 100 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHH
T ss_pred CCCCEEEEcCCCCCHHHHHHH
Confidence 346899999999999998877
No 265
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=87.16 E-value=0.97 Score=41.60 Aligned_cols=51 Identities=12% Similarity=0.199 Sum_probs=31.4
Q ss_pred ceEEeeecCCCCcccHHHHH-------------HHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhh
Q 017439 64 TFKIADLGCSTGPNTFIAMQ-------------NIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLF 126 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~-------------~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF 126 (371)
.-+|+|+|||+|..|. +-. ..++.+++ ++.. .+ .+++...|.-.-||..+|
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~-~~~~-------~~---~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQT-HPFL-------GP---KLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHT-CTTT-------GG---GEEEECSCGGGCCHHHHH
T ss_pred cCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHH-Hhcc-------CC---ceEEEECchhhCCHHHhh
Confidence 4589999999999999 421 11122222 1110 23 577888888777776664
No 266
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=84.58 E-value=0.7 Score=45.24 Aligned_cols=18 Identities=17% Similarity=-0.033 Sum_probs=16.7
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
.+|+|+|||+|.-++.+.
T Consensus 49 ~~VLDl~aGtG~~~l~~a 66 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFA 66 (378)
T ss_dssp SEEEESSCTTSHHHHHHH
T ss_pred CEEEECCCchhHHHHHHH
Confidence 689999999999999887
No 267
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=83.66 E-value=2.3 Score=41.84 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=31.2
Q ss_pred CCCCCchHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHH
Q 017439 20 GDGPHSYAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 20 G~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
|.....|+-+...-+.....+...+ ... .....+|+|++||+|..++.+.+
T Consensus 22 ~~~~~Ffn~~~~~nR~l~~~~~~~~---~~~----------~~~g~~VLDlfaGtG~~sl~aa~ 72 (392)
T 3axs_A 22 SDMPVFYNPRMRVNRDLAVLGLEYL---CKK----------LGRPVKVADPLSASGIRAIRFLL 72 (392)
T ss_dssp TTCCSSCCGGGHHHHHHHHHHHHHH---HHH----------HCSCEEEEESSCTTSHHHHHHHH
T ss_pred CCCCEEEcCCcHHHHHHHHHHHHHH---hhc----------cCCCCEEEECCCcccHHHHHHHH
Confidence 3456778666665554433322221 110 01247999999999999998873
No 268
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=83.59 E-value=0.79 Score=42.05 Aligned_cols=21 Identities=24% Similarity=0.329 Sum_probs=18.0
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+.+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~ 51 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQ 51 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTT
T ss_pred CcCEEEEEcCchHHHHHHHHH
Confidence 346899999999999998874
No 269
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=83.35 E-value=5.9 Score=37.43 Aligned_cols=19 Identities=16% Similarity=0.078 Sum_probs=17.2
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
.-+|+|+|||+|.-|+.+.
T Consensus 103 g~~VLDlcaG~G~kt~~la 121 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLA 121 (309)
T ss_dssp TCEEEESSCTTCHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHH
Confidence 4699999999999999877
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=83.08 E-value=2.4 Score=43.43 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=18.3
Q ss_pred HHHHHHHhhcccCceEEEEec
Q 017439 209 SFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 209 ~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
.|+..-.+-|+|||+++++++
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEec
Confidence 478888889999999999985
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=82.87 E-value=1.2 Score=41.81 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=18.8
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQN 84 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ 84 (371)
..-+|+|+|||+|..|..+...
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~ 63 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIAR 63 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHh
Confidence 3468999999999999998853
No 272
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=81.91 E-value=1.2 Score=40.27 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=18.3
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
..-+|+|+|||+|..|..+..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~ 49 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAK 49 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHH
Confidence 457999999999999998873
No 273
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=79.14 E-value=6.7 Score=38.33 Aligned_cols=21 Identities=19% Similarity=0.165 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...+|+|.|||+|...+.+..
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH
Confidence 346899999999988877664
No 274
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=79.01 E-value=5.6 Score=38.84 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
...|+|.+||+|...+.+..
T Consensus 195 ~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHH
Confidence 46899999999988877664
No 275
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=75.65 E-value=13 Score=36.04 Aligned_cols=22 Identities=18% Similarity=0.140 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAMQN 84 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ 84 (371)
...+|+|.|||+|...+.+...
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHH
Confidence 3478999999999988877643
No 276
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=75.23 E-value=3.9 Score=38.13 Aligned_cols=27 Identities=26% Similarity=0.544 Sum_probs=20.7
Q ss_pred HHhhHHHHHHHHHhhcccCceEEEEec
Q 017439 203 FKNDIESFLNARAQELVPGGLLLLLTP 229 (371)
Q Consensus 203 ~~~D~~~FL~~Ra~EL~pGG~lvl~~~ 229 (371)
+-.++..+++.-.+-|+|||.+++...
T Consensus 72 ~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 72 FLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 344556677777788999999999875
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=73.83 E-value=1.6 Score=40.40 Aligned_cols=24 Identities=29% Similarity=0.383 Sum_probs=20.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNI 85 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~i 85 (371)
.+.++|+|+|||+|.|++.++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 467999999999999999988544
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=72.99 E-value=4 Score=43.35 Aligned_cols=46 Identities=28% Similarity=0.288 Sum_probs=29.1
Q ss_pred hHHhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCceEEeeecCCCCcccHHHHHHH
Q 017439 26 YAKNSIYQEAIVNGSKGMIAAGIRKTLDLKSLRLDTSSTFKIADLGCSTGPNTFIAMQNI 85 (371)
Q Consensus 26 Y~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~Ns~~~~~~i 85 (371)
..+...+|+++..+.+++.. . ..+...|+|+|||+|+.+...+.+.
T Consensus 386 ~vRy~~Y~~AI~~al~d~~~---------~-----~~~~~VVldVGaGtGpLs~~al~A~ 431 (745)
T 3ua3_A 386 QIKYDVYGEAVVGALKDLGA---------D-----GRKTVVIYLLGGGRGPIGTKILKSE 431 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---------T-----CCSEEEEEEESCTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhhc---------c-----cCCCcEEEEECCCCCHHHHHHHHHH
Confidence 34556666665554444321 0 1346899999999999987665443
No 279
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=70.15 E-value=2.4 Score=40.12 Aligned_cols=20 Identities=15% Similarity=0.120 Sum_probs=17.8
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+++
T Consensus 27 g~~vLD~g~G~G~~s~~la~ 46 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILE 46 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHH
Confidence 46999999999999998884
No 280
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=64.03 E-value=4.7 Score=39.91 Aligned_cols=20 Identities=25% Similarity=0.257 Sum_probs=17.1
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+..
T Consensus 94 g~~VLDLgcG~G~~al~LA~ 113 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMS 113 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHT
T ss_pred CCEEEEeCCCchHHHHHHHh
Confidence 36899999999999987664
No 281
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=61.84 E-value=2.4 Score=39.07 Aligned_cols=20 Identities=15% Similarity=0.257 Sum_probs=17.3
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|+|||+|..|+.+..
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~ 103 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLAS 103 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHH
T ss_pred cCeEEEeeCccCHHHHHHHH
Confidence 35899999999999998773
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=56.56 E-value=24 Score=34.45 Aligned_cols=72 Identities=13% Similarity=0.011 Sum_probs=44.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcceeeeccCC
Q 017439 63 STFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKKYFATGVPG 142 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~~f~~gvpg 142 (371)
.-.+++|||||.|.-|-.++ + + ...|+--|.-.-|-. + .. .++-.|. -+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~--------~-r---------------g~~V~aVD~~~l~~~-l-~~--~~~V~~~---~~ 259 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLV--------K-R---------------NMWVYSVDNGPMAQS-L-MD--TGQVTWL---RE 259 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H-T---------------TCEEEEECSSCCCHH-H-HT--TTCEEEE---CS
T ss_pred CCCEEEEeCcCCCHHHHHHH--------H-C---------------CCEEEEEEhhhcChh-h-cc--CCCeEEE---eC
Confidence 35899999999999998776 2 1 125778885433311 1 11 1122333 33
Q ss_pred CcccccCCCCceeEEEecCCccc
Q 017439 143 SFHGRLFPESSLHVAHTSNALPW 165 (371)
Q Consensus 143 SFy~rLfP~~Svd~~~Ss~alHW 165 (371)
..+....+.+.+|+++|=.+.+|
T Consensus 260 d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 260 DGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp CTTTCCCCSSCEEEEEECCSSCH
T ss_pred ccccccCCCCCcCEEEEcCCCCh
Confidence 45555566778999999776654
No 283
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=56.45 E-value=8 Score=37.12 Aligned_cols=19 Identities=16% Similarity=0.298 Sum_probs=16.4
Q ss_pred eEEeeecCCCCcccHHHHH
Q 017439 65 FKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~ 83 (371)
-+|+|+|||+|..|+.+..
T Consensus 215 ~~vLDl~cG~G~~~l~la~ 233 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALAR 233 (369)
T ss_dssp SEEEEESCTTSHHHHHHGG
T ss_pred CEEEEccCCCCHHHHHHHh
Confidence 5799999999999997654
No 284
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=55.09 E-value=5.9 Score=33.94 Aligned_cols=19 Identities=5% Similarity=-0.024 Sum_probs=16.2
Q ss_pred ceEEeeecCCCCc-ccHHHH
Q 017439 64 TFKIADLGCSTGP-NTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~-Ns~~~~ 82 (371)
..+|+|+|||.|. |+..+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La 55 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIR 55 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHH
T ss_pred CCcEEEEccCCChHHHHHHH
Confidence 4799999999995 887766
No 285
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=54.30 E-value=36 Score=32.56 Aligned_cols=66 Identities=9% Similarity=0.150 Sum_probs=39.1
Q ss_pred CCCceEEeeecC------CCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCchhhhhhcCCCCcc
Q 017439 61 TSSTFKIADLGC------STGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNNDFNTLFKSVPLSKK 134 (371)
Q Consensus 61 ~~~~~~IaDlGC------s~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~NDFn~lF~~l~~~~~ 134 (371)
-+...+|+|||+ |.|. . .+++ +...+ -.|+-+||- |+.+ ...
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS---~-------VLr~--~~p~g-----------~~VVavDL~--~~~s-------da~ 154 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT---A-------VLRQ--WLPTG-----------TLLVDSDLN--DFVS-------DAD 154 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH---H-------HHHH--HSCTT-----------CEEEEEESS--CCBC-------SSS
T ss_pred ecCCCEEEeCCCCCCCCCCCcH---H-------HHHH--hCCCC-----------cEEEEeeCc--cccc-------CCC
Confidence 466799999995 7777 1 2222 32110 145666653 3222 123
Q ss_pred eeeeccCCCcccccCCCCceeEEEecCC
Q 017439 135 YFATGVPGSFHGRLFPESSLHVAHTSNA 162 (371)
Q Consensus 135 ~f~~gvpgSFy~rLfP~~Svd~~~Ss~a 162 (371)
+|+-|. +..+.....+|+|+|=.|
T Consensus 155 ~~IqGD----~~~~~~~~k~DLVISDMA 178 (344)
T 3r24_A 155 STLIGD----CATVHTANKWDLIISDMY 178 (344)
T ss_dssp EEEESC----GGGEEESSCEEEEEECCC
T ss_pred eEEEcc----ccccccCCCCCEEEecCC
Confidence 667776 445666788999998765
No 286
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=53.28 E-value=8 Score=36.90 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=26.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcCc
Q 017439 64 TFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNND 121 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~ND 121 (371)
..+|+|||||.|..|..+. . + .. .-.|+.-|+-.++
T Consensus 95 ~~~VlDLGaapGGwsq~~~--------~-~----------~g---v~~V~avdvG~~~ 130 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMA--------T-Q----------KR---VQEVRGYTKGGPG 130 (321)
T ss_dssp CEEEEEETCTTCHHHHHHT--------T-C----------TT---EEEEEEECCCSTT
T ss_pred CCEEEEeCCCCCcHHHHHH--------h-h----------cC---CCEEEEEEcCCCC
Confidence 3499999999999998655 2 1 11 2268888888884
No 287
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=52.68 E-value=5.3 Score=39.52 Aligned_cols=18 Identities=22% Similarity=0.132 Sum_probs=16.4
Q ss_pred eEEeeecCCCCcccHHHH
Q 017439 65 FKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~ 82 (371)
-+|+|+|||+|..|+.+.
T Consensus 292 ~~VLDlgcG~G~~sl~la 309 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLA 309 (425)
T ss_dssp SEEEEETCTTTHHHHHHH
T ss_pred CEEEEeeccchHHHHHHH
Confidence 589999999999999876
No 288
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=48.80 E-value=14 Score=34.17 Aligned_cols=19 Identities=26% Similarity=0.594 Sum_probs=16.5
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~ 82 (371)
..+|+|||||.|..|..+.
T Consensus 79 g~~VvDLGaapGGWSq~~a 97 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCA 97 (267)
T ss_dssp CEEEEEESCTTSHHHHHHH
T ss_pred CCEEEEcCCCCCcHHHHHH
Confidence 3599999999999998666
No 289
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=44.19 E-value=14 Score=35.20 Aligned_cols=24 Identities=25% Similarity=0.491 Sum_probs=20.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNI 85 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~i 85 (371)
...++|+|+|=|+|-|++..+...
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~ 118 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHL 118 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCccHHHHHHHHHH
Confidence 467999999999999998877443
No 290
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=42.21 E-value=16 Score=33.75 Aligned_cols=20 Identities=20% Similarity=0.077 Sum_probs=17.0
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017439 64 TFKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 64 ~~~IaDlGCs~G~Ns~~~~~ 83 (371)
.-+|+|++||+|..++.+..
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~ 255 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAAR 255 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHH
Confidence 35899999999999888774
No 291
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=38.76 E-value=9.2 Score=35.21 Aligned_cols=19 Identities=16% Similarity=0.331 Sum_probs=17.5
Q ss_pred eEEeeecCCCCcccHHHHH
Q 017439 65 FKIADLGCSTGPNTFIAMQ 83 (371)
Q Consensus 65 ~~IaDlGCs~G~Ns~~~~~ 83 (371)
-+|+|+|||.|.-|+.+.+
T Consensus 90 ~~VLDl~~G~G~dal~lA~ 108 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLAS 108 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHH
Confidence 6899999999999998884
No 292
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=33.80 E-value=1.3e+02 Score=28.08 Aligned_cols=109 Identities=10% Similarity=0.125 Sum_probs=61.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHhhhhcccCCCCCCCCCcceeEEEecCCCcC--chhhh-hhc-----CCCCc
Q 017439 62 SSTFKIADLGCSTGPNTFIAMQNIIEAIELIKYQDDCECEHDNPSGLEFQVFFNDHSNN--DFNTL-FKS-----VPLSK 133 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~~~~~p~~~ei~v~~nDlp~N--DFn~l-F~~-----l~~~~ 133 (371)
+++-+|+=+|-|.|.....++ ++. | .-+|...|+-.. +...- |.. +.+.+
T Consensus 82 p~pk~VLIiGgGdG~~~revl----------k~~---------~---v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpR 139 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVT----------RHK---------N---VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPR 139 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHH----------TCT---------T---CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTT
T ss_pred CCCCeEEEECCCchHHHHHHH----------HcC---------C---cceEEEEcCCHHHHHHHHhcCccccccccCCCc
Confidence 567899999999999887776 221 1 112333333221 11111 111 11233
Q ss_pred ceeeeccCCCcccccCCCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHH
Q 017439 134 KYFATGVPGSFHGRLFPESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNA 213 (371)
Q Consensus 134 ~~f~~gvpgSFy~rLfP~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~ 213 (371)
--...+.+..|-.+ .++++|+|+.=..=.+ ..+..+ +.+ .|++.
T Consensus 140 v~v~~~Dg~~~l~~--~~~~yDvIi~D~~dp~--~~~~~L-------~t~-------------------------eFy~~ 183 (294)
T 3o4f_A 140 FKLVIDDGVNFVNQ--TSQTFDVIISDCTDPI--GPGESL-------FTS-------------------------AFYEG 183 (294)
T ss_dssp EEEEESCTTTTTSC--SSCCEEEEEESCCCCC--CTTCCS-------SCC-------------------------HHHHH
T ss_pred EEEEechHHHHHhh--ccccCCEEEEeCCCcC--CCchhh-------cCH-------------------------HHHHH
Confidence 34566777777754 5678999987543221 011111 111 27888
Q ss_pred HHhhcccCceEEEEe
Q 017439 214 RAQELVPGGLLLLLT 228 (371)
Q Consensus 214 Ra~EL~pGG~lvl~~ 228 (371)
-.+-|+|||.|+...
T Consensus 184 ~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 184 CKRCLNPGGIFVAQN 198 (294)
T ss_dssp HHHTEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEec
Confidence 889999999999875
No 293
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=31.28 E-value=23 Score=36.77 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=21.3
Q ss_pred CCCceEEeeecCCCCcccHHHHHH
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQN 84 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~ 84 (371)
..+.++|+|+|.|+|-|.+.+++.
T Consensus 56 ~~~~~~i~e~gfG~G~n~l~~~~~ 79 (689)
T 3pvc_A 56 PQQSCIFAETGFGTGLNFLTLWRD 79 (689)
T ss_dssp CSSEEEEEEECCTTSHHHHHHHHH
T ss_pred CCCceEEEEecCchHHHHHHHHHH
Confidence 356899999999999999999865
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=28.19 E-value=89 Score=30.46 Aligned_cols=65 Identities=11% Similarity=-0.019 Sum_probs=38.7
Q ss_pred eeeccCCCcccccC-CCCceeEEEecCCccccCCCCccccCCCCCCcCCCceeecCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017439 136 FATGVPGSFHGRLF-PESSLHVAHTSNALPWLSKIPKEITNSNSPAWNRGHILCSGFEKEVAEAYSAQFKNDIESFLNAR 214 (371)
Q Consensus 136 f~~gvpgSFy~rLf-P~~Svd~~~Ss~alHWLS~vP~~l~d~~~~~~nkg~i~~~~~~~~~~~ay~~Q~~~D~~~FL~~R 214 (371)
...+.+..|-++.- ..+.+|+|+.=..-.+.+..|..... .-|. ..|++.-
T Consensus 266 vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~---------------------~Lft-------~eFy~~~ 317 (381)
T 3c6k_A 266 VLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDST---------------------WEFL-------RLILDLS 317 (381)
T ss_dssp EEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CH---------------------HHHH-------HHHHHHH
T ss_pred eehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcch---------------------HHHH-------HHHHHHH
Confidence 44566666665544 34578999876555554444432111 1122 3478888
Q ss_pred HhhcccCceEEEEe
Q 017439 215 AQELVPGGLLLLLT 228 (371)
Q Consensus 215 a~EL~pGG~lvl~~ 228 (371)
.+-|+|||.|+...
T Consensus 318 ~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 318 MKVLKQDGKYFTQG 331 (381)
T ss_dssp HHTEEEEEEEEEEE
T ss_pred HHhcCCCCEEEEec
Confidence 88999999998764
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=27.77 E-value=25 Score=32.75 Aligned_cols=21 Identities=33% Similarity=0.591 Sum_probs=17.8
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017439 62 SSTFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 62 ~~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..-.+|+|||||-|.=|..+.
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa 92 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAA 92 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHT
T ss_pred CCCCEEEEcCCCCCHHHHHHh
Confidence 346899999999999887766
No 296
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=27.01 E-value=42 Score=29.65 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhc
Q 017439 245 NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKR 288 (371)
Q Consensus 245 ~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~ 288 (371)
+|+-+-+-++.|+.+|.|+++..+. -.+..+++|+.+.+++
T Consensus 158 fw~~l~~~l~~~~~~Gfi~~~~~~~---i~~~d~~~e~~~~l~~ 198 (199)
T 3qua_A 158 HYDGLLTWLRGLVPTGYVSQRAMDS---LVVVDNVEAALEACAP 198 (199)
T ss_dssp TTHHHHHHHHHTTTTTSSCHHHHHT---SEEESSHHHHHHHHSC
T ss_pred cchHHHHHHHHHHHCCCCCHHHCCe---EEEeCCHHHHHHHHhc
Confidence 5888888889999999999987664 4568899999888875
No 297
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=24.71 E-value=79 Score=28.18 Aligned_cols=41 Identities=17% Similarity=0.117 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhc
Q 017439 245 NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKR 288 (371)
Q Consensus 245 ~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~ 288 (371)
+|+-+-+-+..|+++|.|+++..+.+ .+..+++|+.+.+++
T Consensus 172 ~w~~l~~~l~~~~~~Gfi~~~~~~~~---~~~~~~~e~~~~l~~ 212 (217)
T 1wek_A 172 YWEGLVRWLAFLRDQKAVGPEDLQLF---RLTDEPEEVVQALKA 212 (217)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTGGGGS---EEESCHHHHHHHHHC
T ss_pred cchhHHHHHHHHHHCCCCCHHHcCeE---EEeCCHHHHHHHHHH
Confidence 67777777799999999999887644 678999999888875
No 298
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=24.04 E-value=58 Score=29.03 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhc
Q 017439 245 NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKR 288 (371)
Q Consensus 245 ~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~ 288 (371)
+|+-|.+-++.|+.+|.|+++..+. -.+..+++|+.+.+++
T Consensus 150 ~w~~l~~~l~~~~~~Gfi~~~~~~~---~~~~d~~ee~~~~l~~ 190 (215)
T 2a33_A 150 YYNSLLSFIDKAVEEGFISPTAREI---IVSAPTAKELVKKLEE 190 (215)
T ss_dssp TTHHHHHHHHHHHHHTSSCHHHHTT---EEEESSHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHcCCCCHHHCCe---EEEeCCHHHHHHHHHH
Confidence 5787888889999999999988764 4678999999999975
No 299
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=23.68 E-value=34 Score=27.65 Aligned_cols=26 Identities=23% Similarity=0.452 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHhhHHHHHHHHHhh
Q 017439 192 EKEVAEAYSAQFKNDIESFLNARAQE 217 (371)
Q Consensus 192 ~~~~~~ay~~Q~~~D~~~FL~~Ra~E 217 (371)
|..+...|.+||++||-..|+.|..+
T Consensus 12 ~~k~i~~fS~eF~~~Fl~lLr~~~g~ 37 (111)
T 2v1n_A 12 PQQFMDYFSEEFRNDFLELLRRRFGT 37 (111)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44567899999999999999998754
No 300
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=23.47 E-value=38 Score=34.91 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=21.7
Q ss_pred CCCceEEeeecCCCCcccHHHHHHH
Q 017439 61 TSSTFKIADLGCSTGPNTFIAMQNI 85 (371)
Q Consensus 61 ~~~~~~IaDlGCs~G~Ns~~~~~~i 85 (371)
..+.++|+|+|-|+|-|.+..++..
T Consensus 64 ~~~~~~i~e~gfG~Gln~l~~~~~~ 88 (676)
T 3ps9_A 64 PHPLFVVAESGFGTGLNFLTLWQAF 88 (676)
T ss_dssp SSSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCceEEEEeCCchHHHHHHHHHHH
Confidence 3567999999999999999998653
No 301
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=22.52 E-value=37 Score=26.09 Aligned_cols=43 Identities=12% Similarity=0.171 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHcCCCchh----hhcccCcccccCCHHHHHHHhhc
Q 017439 246 FDYLGSCLYDLANMGLIAEE----KVDSFNVPMYYPFLGELMGHIKR 288 (371)
Q Consensus 246 ~~~l~~al~~mv~eGli~~e----~~d~fn~P~Y~ps~eE~~~~i~~ 288 (371)
-..+..+|..|.++|+|... .-....+..|..+.+++...++.
T Consensus 47 ~~tV~~~L~~L~~~GlV~~~~~~~~~~g~~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 47 VNDVRKKLNLLEEQGFVSYRKTRDKDSGWFIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEC---CCCCEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHHHCCCEEEEecccCCCceEEEEeecCHHHHHHHHHH
Confidence 35789999999999999876 33444445557788887776653
No 302
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=21.18 E-value=1.1e+02 Score=37.22 Aligned_cols=20 Identities=10% Similarity=0.046 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017439 63 STFKIADLGCSTGPNTFIAM 82 (371)
Q Consensus 63 ~~~~IaDlGCs~G~Ns~~~~ 82 (371)
..++|+++|.++|..|..++
T Consensus 1240 ~~~~ilEigagtg~~t~~il 1259 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIP 1259 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHH
T ss_pred CCceEEEECCCccHHHHHHH
Confidence 46899999999999887665
No 303
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=21.16 E-value=66 Score=27.97 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHcCCCchhhhcccCcccccCCHHHHHHHhhc
Q 017439 245 NFDYLGSCLYDLANMGLIAEEKVDSFNVPMYYPFLGELMGHIKR 288 (371)
Q Consensus 245 ~~~~l~~al~~mv~eGli~~e~~d~fn~P~Y~ps~eE~~~~i~~ 288 (371)
+|+-+-+-++.|+++|.|+++.++. -.+..+++|+.+.+++
T Consensus 138 ~~~~l~~~l~~~~~~Gfi~~~~~~~---~~~~~~~~e~~~~l~~ 178 (191)
T 1t35_A 138 YFEPMMKMVKYSIQEGFSNESHLKL---IHSSSRPDELIEQMQN 178 (191)
T ss_dssp TTHHHHHHHHHHHHTTSSCTTHHHH---EEEESSHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHCCCCCHHHcCe---EEEeCCHHHHHHHHHH
Confidence 5787777779999999999988764 4668999999998875
Done!