Query 017440
Match_columns 371
No_of_seqs 237 out of 1235
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:28:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz0_A Glycerophosphoryl diest 100.0 1.8E-54 6E-59 401.4 25.3 241 48-341 9-250 (252)
2 3qvq_A Phosphodiesterase OLEI0 100.0 6.6E-54 2.3E-58 397.5 29.1 245 46-343 5-251 (252)
3 3ks6_A Glycerophosphoryl diest 100.0 4.7E-53 1.6E-57 391.2 25.0 243 50-344 2-246 (250)
4 2otd_A Glycerophosphodiester p 100.0 3.1E-53 1.1E-57 391.9 23.6 238 49-340 5-245 (247)
5 2oog_A Glycerophosphoryl diest 100.0 3.2E-52 1.1E-56 393.3 26.7 255 48-344 21-283 (287)
6 3l12_A Putative glycerophospho 100.0 1E-51 3.5E-56 394.4 28.4 266 48-343 15-309 (313)
7 2o55_A Putative glycerophospho 100.0 7.6E-52 2.6E-56 385.0 24.9 239 48-342 4-256 (258)
8 3ch0_A Glycerophosphodiester p 100.0 2.8E-51 9.5E-56 384.0 21.8 249 48-336 6-270 (272)
9 3no3_A Glycerophosphodiester p 100.0 7.8E-51 2.7E-55 373.6 24.0 234 48-343 2-237 (238)
10 1zcc_A Glycerophosphodiester p 100.0 2.7E-52 9.2E-57 385.8 13.0 233 51-344 2-237 (248)
11 1o1z_A GDPD, glycerophosphodie 100.0 1.3E-49 4.6E-54 364.5 22.8 219 48-338 10-233 (234)
12 3mz2_A Glycerophosphoryl diest 100.0 8.4E-49 2.9E-53 369.9 27.5 235 48-343 29-279 (292)
13 1ydy_A Glycerophosphoryl diest 100.0 8.1E-49 2.8E-53 380.7 24.7 273 37-339 19-355 (356)
14 1vd6_A Glycerophosphoryl diest 100.0 9.3E-49 3.2E-53 356.8 21.9 216 48-338 5-222 (224)
15 3i10_A Putative glycerophospho 100.0 2E-45 6.8E-50 343.8 21.8 245 48-344 15-276 (278)
16 1xx1_A Smase I, sphingomyelina 100.0 3.2E-38 1.1E-42 297.2 13.8 225 51-343 7-265 (285)
17 3rlg_A Sphingomyelin phosphodi 99.9 2.4E-23 8.2E-28 192.0 19.6 228 48-342 26-281 (302)
18 1djx_A PLC-D1, phosphoinositid 95.8 0.0053 1.8E-07 63.1 4.2 41 73-113 188-228 (624)
19 2zkm_X 1-phosphatidylinositol- 95.5 0.0086 2.9E-07 63.2 4.4 41 73-113 336-378 (799)
20 3qr0_A Phospholipase C-beta (P 95.1 0.013 4.3E-07 61.9 4.1 41 73-113 347-387 (816)
21 3ohm_B 1-phosphatidylinositol- 94.3 0.025 8.7E-07 60.0 4.0 40 74-113 341-382 (885)
22 3h4x_A Phosphatidylinositol-sp 92.9 0.67 2.3E-05 43.0 10.3 37 79-115 45-82 (339)
23 3f4w_A Putative hexulose 6 pho 90.9 1.1 3.8E-05 38.6 9.2 94 227-330 38-134 (211)
24 3kts_A Glycerol uptake operon 89.1 7.5 0.00026 33.3 12.7 143 167-335 37-184 (192)
25 3nav_A Tryptophan synthase alp 87.3 4.1 0.00014 36.9 10.5 107 231-343 86-204 (271)
26 3q58_A N-acetylmannosamine-6-p 87.1 15 0.00051 32.2 15.1 141 173-329 7-155 (229)
27 2p10_A MLL9387 protein; putati 86.4 1.9 6.6E-05 39.2 7.6 97 226-332 75-192 (286)
28 2d73_A Alpha-glucosidase SUSB; 86.3 3.2 0.00011 42.9 10.0 69 263-332 372-471 (738)
29 2rbg_A Putative uncharacterize 85.7 1.4 4.7E-05 34.2 5.3 70 264-334 21-97 (126)
30 3a24_A Alpha-galactosidase; gl 85.1 1.9 6.5E-05 44.0 7.7 71 263-333 310-397 (641)
31 3vnd_A TSA, tryptophan synthas 84.3 4.9 0.00017 36.3 9.4 107 231-342 84-201 (267)
32 4e38_A Keto-hydroxyglutarate-a 84.0 7.6 0.00026 34.3 10.3 116 209-345 50-171 (232)
33 3igs_A N-acetylmannosamine-6-p 83.6 22 0.00076 31.1 14.5 141 173-329 7-155 (232)
34 3kts_A Glycerol uptake operon 83.4 6.2 0.00021 33.8 9.1 54 288-341 42-100 (192)
35 1vkf_A Glycerol uptake operon 83.1 11 0.00037 32.1 10.5 138 169-335 41-182 (188)
36 3qja_A IGPS, indole-3-glycerol 79.7 34 0.0012 30.7 14.4 142 171-331 41-190 (272)
37 3jr2_A Hexulose-6-phosphate sy 78.2 7.3 0.00025 33.7 8.1 92 227-329 44-138 (218)
38 1vhc_A Putative KHG/KDPG aldol 77.5 14 0.00049 32.2 9.8 96 231-346 57-155 (224)
39 3vk5_A MOEO5; TIM barrel, tran 76.0 15 0.00052 33.4 9.5 73 269-342 193-275 (286)
40 2fli_A Ribulose-phosphate 3-ep 75.9 11 0.00039 32.2 8.7 80 263-342 17-108 (220)
41 3lab_A Putative KDPG (2-keto-3 75.7 14 0.00049 32.1 9.1 117 208-345 28-156 (217)
42 3tha_A Tryptophan synthase alp 75.7 4.5 0.00015 36.3 6.0 80 263-342 104-194 (252)
43 3usb_A Inosine-5'-monophosphat 75.4 28 0.00097 34.3 12.4 104 215-332 265-390 (511)
44 1mxs_A KDPG aldolase; 2-keto-3 71.6 37 0.0013 29.5 10.9 72 266-345 89-163 (225)
45 1vkf_A Glycerol uptake operon 70.6 12 0.00042 31.8 7.2 52 289-341 45-101 (188)
46 3bw2_A 2-nitropropane dioxygen 69.9 16 0.00053 34.4 8.7 63 264-331 111-173 (369)
47 3ajx_A 3-hexulose-6-phosphate 69.2 21 0.0007 30.2 8.6 90 228-327 39-131 (207)
48 2isw_A Putative fructose-1,6-b 69.2 41 0.0014 31.1 11.0 135 170-327 3-170 (323)
49 2gjl_A Hypothetical protein PA 69.0 14 0.00048 34.0 8.0 63 263-331 84-146 (328)
50 3gr7_A NADPH dehydrogenase; fl 68.9 67 0.0023 29.7 12.7 111 230-342 198-324 (340)
51 2z6i_A Trans-2-enoyl-ACP reduc 68.5 36 0.0012 31.3 10.7 63 263-331 76-138 (332)
52 1wa3_A 2-keto-3-deoxy-6-phosph 67.1 27 0.00092 29.4 8.9 105 207-331 24-132 (205)
53 7odc_A Protein (ornithine deca 67.1 62 0.0021 30.9 12.4 103 220-340 37-144 (424)
54 3bo9_A Putative nitroalkan dio 67.0 16 0.00054 33.8 7.9 62 264-331 91-152 (326)
55 3n9r_A Fructose-bisphosphate a 66.2 60 0.0021 29.8 11.4 111 205-327 28-172 (307)
56 4e7p_A Response regulator; DNA 66.0 44 0.0015 25.8 11.7 81 264-346 55-141 (150)
57 1twd_A Copper homeostasis prot 65.7 62 0.0021 28.8 11.0 126 218-347 20-169 (256)
58 1rpx_A Protein (ribulose-phosp 65.4 22 0.00074 30.7 8.1 79 263-341 24-116 (230)
59 3kht_A Response regulator; PSI 64.2 39 0.0013 25.8 8.9 51 291-343 68-126 (144)
60 3inp_A D-ribulose-phosphate 3- 63.5 19 0.00064 32.0 7.3 70 226-306 70-140 (246)
61 2yxb_A Coenzyme B12-dependent 63.4 30 0.001 28.4 8.1 80 264-345 58-145 (161)
62 3ctl_A D-allulose-6-phosphate 63.4 19 0.00064 31.6 7.2 80 262-342 13-105 (231)
63 2q5c_A NTRC family transcripti 63.3 49 0.0017 28.0 9.8 95 222-331 53-150 (196)
64 3b0p_A TRNA-dihydrouridine syn 63.3 59 0.002 30.2 11.2 66 265-332 147-227 (350)
65 1wbh_A KHG/KDPG aldolase; lyas 63.3 48 0.0016 28.5 9.8 72 266-345 79-153 (214)
66 3hgj_A Chromate reductase; TIM 61.9 93 0.0032 28.8 12.3 112 230-342 206-335 (349)
67 1xm3_A Thiazole biosynthesis p 61.1 89 0.003 27.7 17.5 42 289-331 166-208 (264)
68 2nva_A Arginine decarboxylase, 60.6 95 0.0032 28.7 12.2 90 233-340 31-123 (372)
69 1wv2_A Thiazole moeity, thiazo 60.5 26 0.00088 31.4 7.5 43 288-331 174-217 (265)
70 4fxs_A Inosine-5'-monophosphat 60.3 45 0.0016 32.7 10.2 99 221-332 245-365 (496)
71 3o63_A Probable thiamine-phosp 60.0 20 0.00067 31.8 6.8 57 269-330 106-162 (243)
72 3ovp_A Ribulose-phosphate 3-ep 59.2 46 0.0016 28.9 9.1 70 226-306 47-118 (228)
73 1yxy_A Putative N-acetylmannos 59.0 85 0.0029 26.8 11.5 41 290-331 176-216 (234)
74 1rvg_A Fructose-1,6-bisphospha 58.2 1.1E+02 0.0038 27.9 11.7 110 205-328 28-171 (305)
75 3fwz_A Inner membrane protein 56.9 67 0.0023 25.0 10.3 116 206-340 18-135 (140)
76 2oo0_A ODC, ornithine decarbox 56.6 1E+02 0.0035 29.8 12.0 103 220-340 47-154 (471)
77 3glc_A Aldolase LSRF; TIM barr 56.2 24 0.00084 32.2 6.9 72 268-340 131-220 (295)
78 1z41_A YQJM, probable NADH-dep 56.2 1.1E+02 0.0038 28.0 11.7 111 230-342 198-324 (338)
79 1h5y_A HISF; histidine biosynt 56.2 30 0.001 29.8 7.4 77 265-342 36-123 (253)
80 1i4n_A Indole-3-glycerol phosp 56.1 25 0.00084 31.4 6.7 138 172-333 30-181 (251)
81 1vhn_A Putative flavin oxidore 55.6 59 0.002 29.6 9.6 103 230-340 115-228 (318)
82 3igs_A N-acetylmannosamine-6-p 55.4 49 0.0017 28.8 8.6 41 289-330 170-210 (232)
83 1f76_A Dihydroorotate dehydrog 54.7 76 0.0026 29.0 10.3 97 231-334 192-322 (336)
84 3eul_A Possible nitrate/nitrit 54.7 71 0.0024 24.6 10.5 54 291-346 78-136 (152)
85 3khj_A Inosine-5-monophosphate 54.3 97 0.0033 29.0 10.9 61 266-329 108-172 (361)
86 1uas_A Alpha-galactosidase; TI 54.1 28 0.00095 32.6 7.2 43 290-332 77-132 (362)
87 1h1y_A D-ribulose-5-phosphate 54.0 28 0.00096 30.1 6.8 89 227-329 50-144 (228)
88 1tqj_A Ribulose-phosphate 3-ep 53.4 8.2 0.00028 33.9 3.1 31 73-106 14-44 (230)
89 1tqj_A Ribulose-phosphate 3-ep 52.9 31 0.0011 30.0 6.9 81 262-342 17-111 (230)
90 1vzw_A Phosphoribosyl isomeras 52.4 73 0.0025 27.4 9.3 74 267-342 37-121 (244)
91 3q58_A N-acetylmannosamine-6-p 52.4 53 0.0018 28.6 8.3 41 289-330 170-210 (229)
92 2ekc_A AQ_1548, tryptophan syn 52.1 45 0.0016 29.6 7.9 70 231-305 83-152 (262)
93 3iwp_A Copper homeostasis prot 52.0 85 0.0029 28.4 9.6 109 219-331 59-187 (287)
94 2yw3_A 4-hydroxy-2-oxoglutarat 51.1 48 0.0017 28.3 7.7 60 266-333 74-133 (207)
95 3o27_A Putative uncharacterize 50.8 13 0.00046 25.8 3.1 46 53-108 13-59 (68)
96 2y88_A Phosphoribosyl isomeras 50.8 79 0.0027 27.1 9.3 76 265-342 34-120 (244)
97 3vzx_A Heptaprenylglyceryl pho 50.7 1.3E+02 0.0043 26.3 10.6 68 272-341 150-224 (228)
98 3tsm_A IGPS, indole-3-glycerol 48.0 44 0.0015 30.1 7.1 139 171-331 44-197 (272)
99 1qwg_A PSL synthase;, (2R)-pho 47.9 82 0.0028 27.9 8.6 69 263-332 86-170 (251)
100 3ffs_A Inosine-5-monophosphate 47.8 34 0.0012 32.7 6.6 61 266-329 147-211 (400)
101 2nli_A Lactate oxidase; flavoe 47.7 1.3E+02 0.0046 28.0 10.8 97 226-336 214-319 (368)
102 2yxx_A Diaminopimelate decarbo 47.5 1.7E+02 0.0059 27.1 11.7 91 232-340 26-121 (386)
103 1vrd_A Inosine-5'-monophosphat 47.3 63 0.0021 31.5 8.8 92 229-333 265-372 (494)
104 1rpx_A Protein (ribulose-phosp 47.2 10 0.00034 33.0 2.6 28 74-104 21-48 (230)
105 1ccw_A Protein (glutamate muta 47.1 70 0.0024 25.2 7.6 68 264-331 43-120 (137)
106 2xn2_A Alpha-galactosidase; hy 46.1 62 0.0021 33.4 8.8 44 263-306 351-415 (732)
107 1yxy_A Putative N-acetylmannos 45.8 1.4E+02 0.0048 25.4 15.3 142 173-327 7-157 (234)
108 3inp_A D-ribulose-phosphate 3- 45.7 59 0.002 28.7 7.5 81 262-342 40-133 (246)
109 3zwt_A Dihydroorotate dehydrog 45.4 1.5E+02 0.005 27.7 10.7 78 264-342 236-345 (367)
110 3r2g_A Inosine 5'-monophosphat 45.4 58 0.002 30.6 7.8 63 265-329 102-168 (361)
111 1ep3_A Dihydroorotate dehydrog 45.2 1.3E+02 0.0045 26.8 10.1 41 291-332 231-272 (311)
112 2v82_A 2-dehydro-3-deoxy-6-pho 45.2 73 0.0025 26.8 7.9 56 267-329 72-127 (212)
113 1yad_A Regulatory protein TENI 45.0 38 0.0013 28.9 6.1 57 269-331 82-138 (221)
114 3tdn_A FLR symmetric alpha-bet 45.0 73 0.0025 27.6 8.1 78 264-342 37-125 (247)
115 2e6f_A Dihydroorotate dehydrog 45.0 97 0.0033 27.9 9.2 50 291-341 233-290 (314)
116 3sgz_A Hydroxyacid oxidase 2; 44.9 2E+02 0.0067 26.8 11.3 96 226-335 202-306 (352)
117 1h1y_A D-ribulose-5-phosphate 44.8 65 0.0022 27.7 7.6 78 263-342 20-112 (228)
118 1ep3_A Dihydroorotate dehydrog 44.7 89 0.0031 27.9 8.9 40 290-329 153-195 (311)
119 1ydn_A Hydroxymethylglutaryl-C 44.2 75 0.0026 28.6 8.2 55 290-344 123-195 (295)
120 1mzh_A Deoxyribose-phosphate a 44.0 1.5E+02 0.0053 25.3 10.7 76 264-340 134-214 (225)
121 3cz5_A Two-component response 43.9 1.1E+02 0.0036 23.5 13.5 79 264-344 40-124 (153)
122 1y0e_A Putative N-acetylmannos 43.9 1.4E+02 0.005 25.0 10.6 40 291-331 165-205 (223)
123 3jte_A Response regulator rece 43.1 1E+02 0.0036 23.1 11.8 52 291-344 66-122 (143)
124 1jub_A Dihydroorotate dehydrog 42.6 95 0.0033 27.9 8.7 50 291-341 230-288 (311)
125 2o0t_A Diaminopimelate decarbo 42.5 1.3E+02 0.0044 29.0 10.1 90 233-340 56-149 (467)
126 1wv2_A Thiazole moeity, thiazo 42.1 30 0.001 31.0 4.9 36 292-329 127-162 (265)
127 3ovp_A Ribulose-phosphate 3-ep 41.9 57 0.0019 28.3 6.7 81 262-342 17-111 (228)
128 3qja_A IGPS, indole-3-glycerol 41.7 1.2E+02 0.0042 27.0 9.1 73 270-343 177-262 (272)
129 2plj_A Lysine/ornithine decarb 41.2 1.1E+02 0.0038 29.0 9.3 49 289-338 108-159 (419)
130 3vnd_A TSA, tryptophan synthas 40.8 13 0.00044 33.6 2.3 49 290-341 195-244 (267)
131 4avf_A Inosine-5'-monophosphat 40.8 62 0.0021 31.6 7.5 90 230-332 258-363 (490)
132 1qop_A Tryptophan synthase alp 40.6 1.2E+02 0.0041 26.7 8.9 71 230-305 82-152 (268)
133 3sgz_A Hydroxyacid oxidase 2; 40.0 1.4E+02 0.0047 27.9 9.4 41 289-331 205-246 (352)
134 1gox_A (S)-2-hydroxy-acid oxid 39.7 2.2E+02 0.0075 26.4 10.9 95 227-335 211-314 (370)
135 1ujp_A Tryptophan synthase alp 39.6 97 0.0033 27.7 8.1 69 231-305 81-149 (271)
136 2p3e_A Diaminopimelate decarbo 39.5 2.4E+02 0.0083 26.3 11.7 89 233-339 48-139 (420)
137 3exr_A RMPD (hexulose-6-phosph 39.1 1.3E+02 0.0043 25.9 8.5 99 226-334 42-145 (221)
138 1thf_D HISF protein; thermophI 39.0 88 0.003 27.0 7.7 76 266-342 34-120 (253)
139 2xij_A Methylmalonyl-COA mutas 39.0 1.9E+02 0.0065 30.0 10.9 90 263-354 643-744 (762)
140 3e8m_A Acylneuraminate cytidyl 38.9 74 0.0025 25.1 6.7 53 290-343 37-92 (164)
141 1qo2_A Molecule: N-((5-phospho 38.5 73 0.0025 27.5 7.0 52 289-342 62-118 (241)
142 4fo4_A Inosine 5'-monophosphat 38.5 79 0.0027 29.7 7.5 34 298-332 209-242 (366)
143 1jcn_A Inosine monophosphate d 38.3 83 0.0028 30.8 8.0 64 264-329 256-323 (514)
144 3lua_A Response regulator rece 38.3 1.2E+02 0.0042 22.6 8.7 53 291-345 68-127 (140)
145 2w6r_A Imidazole glycerol phos 38.2 59 0.002 28.5 6.4 51 289-340 62-121 (266)
146 1pii_A N-(5'phosphoribosyl)ant 37.8 81 0.0028 30.6 7.7 136 172-333 38-187 (452)
147 3l9w_A Glutathione-regulated p 37.8 2.1E+02 0.0072 27.0 10.6 115 205-338 14-130 (413)
148 1f3t_A ODC, ornithine decarbox 37.5 2.1E+02 0.0072 27.0 10.7 50 289-339 91-143 (425)
149 2qr3_A Two-component system re 37.5 1.3E+02 0.0043 22.4 11.8 52 291-344 69-125 (140)
150 3ctl_A D-allulose-6-phosphate 37.4 42 0.0014 29.3 5.1 88 226-328 42-133 (231)
151 3i65_A Dihydroorotate dehydrog 37.3 1.4E+02 0.0047 28.6 9.1 68 263-331 284-375 (415)
152 1p0k_A Isopentenyl-diphosphate 37.3 1.9E+02 0.0065 26.4 10.1 47 289-336 238-286 (349)
153 1ypf_A GMP reductase; GUAC, pu 37.2 1.9E+02 0.0066 26.4 10.0 92 230-334 137-243 (336)
154 3rcm_A TATD family hydrolase; 36.8 2.3E+02 0.0078 25.3 11.1 74 264-341 116-198 (287)
155 1eep_A Inosine 5'-monophosphat 36.3 91 0.0031 29.4 7.8 91 230-333 182-288 (404)
156 2p9j_A Hypothetical protein AQ 36.3 1.1E+02 0.0038 23.9 7.3 51 291-342 43-96 (162)
157 2bdq_A Copper homeostasis prot 35.9 2.2E+02 0.0074 24.7 11.5 125 219-344 21-173 (224)
158 3gt7_A Sensor protein; structu 35.9 1.5E+02 0.0051 22.8 11.2 78 264-343 40-125 (154)
159 4e38_A Keto-hydroxyglutarate-a 35.7 2.2E+02 0.0075 24.7 10.0 108 221-342 16-126 (232)
160 2obb_A Hypothetical protein; s 35.2 47 0.0016 26.6 4.7 19 291-310 31-49 (142)
161 3vab_A Diaminopimelate decarbo 34.9 2.7E+02 0.0093 26.5 11.0 68 265-340 87-157 (443)
162 4fo4_A Inosine 5'-monophosphat 34.8 71 0.0024 30.0 6.6 62 265-329 110-176 (366)
163 3b0p_A TRNA-dihydrouridine syn 34.7 2.7E+02 0.0093 25.5 13.9 25 74-98 68-92 (350)
164 1qop_A Tryptophan synthase alp 34.6 20 0.00068 32.0 2.6 41 290-331 194-235 (268)
165 1geq_A Tryptophan synthase alp 34.5 1E+02 0.0036 26.5 7.4 53 265-317 98-150 (248)
166 3m47_A Orotidine 5'-phosphate 34.5 2.2E+02 0.0076 24.4 9.7 105 227-342 50-171 (228)
167 3l5l_A Xenobiotic reductase A; 34.5 1.1E+02 0.0038 28.4 7.9 112 231-343 213-343 (363)
168 1kbi_A Cytochrome B2, L-LCR; f 34.4 2.5E+02 0.0084 27.5 10.7 96 227-336 329-438 (511)
169 2czd_A Orotidine 5'-phosphate 34.3 52 0.0018 27.9 5.2 102 226-338 36-149 (208)
170 1ka9_F Imidazole glycerol phos 34.3 89 0.003 27.0 6.9 51 291-342 65-121 (252)
171 1jcn_A Inosine monophosphate d 33.9 1.5E+02 0.0051 28.9 9.1 91 230-333 284-390 (514)
172 3btn_A Antizyme inhibitor 1; T 33.8 3.2E+02 0.011 26.0 13.3 104 219-340 36-144 (448)
173 2nzl_A Hydroxyacid oxidase 1; 33.8 2.3E+02 0.0078 26.7 10.0 95 228-336 239-342 (392)
174 3mmz_A Putative HAD family hyd 33.7 88 0.003 25.3 6.4 49 292-342 47-98 (176)
175 2c6q_A GMP reductase 2; TIM ba 33.7 2.9E+02 0.0098 25.5 12.1 92 230-334 149-256 (351)
176 3gl9_A Response regulator; bet 33.5 1.4E+02 0.0048 21.8 11.5 50 291-342 63-119 (122)
177 3n1u_A Hydrolase, HAD superfam 33.2 1.2E+02 0.004 25.0 7.2 50 292-342 54-106 (191)
178 2yfo_A Alpha-galactosidase-suc 33.1 1.3E+02 0.0046 30.8 8.8 16 291-306 396-411 (720)
179 1p4c_A L(+)-mandelate dehydrog 33.0 2.7E+02 0.0091 26.0 10.3 95 227-335 211-312 (380)
180 3hdg_A Uncharacterized protein 32.9 1.5E+02 0.0051 22.0 11.4 52 291-344 68-124 (137)
181 3ij5_A 3-deoxy-D-manno-octulos 32.8 95 0.0032 26.3 6.6 50 292-342 84-136 (211)
182 1ka9_F Imidazole glycerol phos 32.7 1.4E+02 0.0047 25.7 7.9 65 265-330 155-225 (252)
183 1vrd_A Inosine-5'-monophosphat 32.6 1.1E+02 0.0037 29.7 7.8 64 264-329 238-305 (494)
184 3nl6_A Thiamine biosynthetic b 32.6 1.1E+02 0.0036 30.5 7.7 56 269-329 79-137 (540)
185 3lte_A Response regulator; str 32.6 1.5E+02 0.005 21.8 11.6 53 291-345 67-125 (132)
186 1xi3_A Thiamine phosphate pyro 32.6 1.1E+02 0.0039 25.4 7.1 56 269-330 80-135 (215)
187 1szn_A Alpha-galactosidase; (b 32.4 1.4E+02 0.0049 28.3 8.4 40 291-332 81-134 (417)
188 3r2g_A Inosine 5'-monophosphat 32.3 2.3E+02 0.0078 26.4 9.6 90 230-333 129-231 (361)
189 2qgh_A Diaminopimelate decarbo 32.3 2.6E+02 0.0088 26.3 10.3 67 265-339 71-140 (425)
190 2htm_A Thiazole biosynthesis p 31.8 1E+02 0.0034 27.6 6.6 51 289-340 164-224 (268)
191 1y0e_A Putative N-acetylmannos 31.5 2.3E+02 0.0078 23.7 15.7 113 207-331 25-147 (223)
192 3a5v_A Alpha-galactosidase; be 31.5 58 0.002 30.9 5.4 43 290-332 77-131 (397)
193 1eep_A Inosine 5'-monophosphat 31.5 98 0.0034 29.2 7.1 62 266-329 156-221 (404)
194 3kru_A NADH:flavin oxidoreduct 31.3 3.1E+02 0.011 25.2 11.0 101 230-335 197-312 (343)
195 3mn1_A Probable YRBI family ph 31.1 81 0.0028 25.9 5.8 51 291-342 53-106 (189)
196 1to3_A Putative aldolase YIHT; 30.6 1.2E+02 0.0042 27.5 7.3 73 268-341 114-215 (304)
197 1q6o_A Humps, 3-keto-L-gulonat 30.4 1.9E+02 0.0065 24.3 8.2 93 226-329 40-135 (216)
198 3kto_A Response regulator rece 30.4 1.7E+02 0.0057 21.8 8.2 52 291-344 69-125 (136)
199 2qxy_A Response regulator; reg 30.3 1.7E+02 0.0058 21.8 10.2 77 265-344 38-120 (142)
200 3nhm_A Response regulator; pro 30.2 1.6E+02 0.0055 21.6 11.6 78 264-343 36-120 (133)
201 3eod_A Protein HNR; response r 29.8 1.6E+02 0.0056 21.5 10.9 54 290-345 67-126 (130)
202 3cu2_A Ribulose-5-phosphate 3- 29.7 38 0.0013 29.8 3.5 87 227-327 57-152 (237)
203 3n2b_A Diaminopimelate decarbo 29.2 3.8E+02 0.013 25.4 11.1 68 265-340 90-160 (441)
204 3ffs_A Inosine-5-monophosphate 28.9 2.2E+02 0.0076 26.9 9.0 62 269-331 199-276 (400)
205 3f4w_A Putative hexulose 6 pho 28.9 2.5E+02 0.0085 23.2 15.3 123 183-330 53-187 (211)
206 2j66_A BTRK, decarboxylase; bu 28.5 3.4E+02 0.012 25.4 10.4 109 211-339 9-123 (428)
207 1k1e_A Deoxy-D-mannose-octulos 28.5 1.4E+02 0.0047 24.1 6.8 53 289-342 40-95 (180)
208 3hv2_A Response regulator/HD d 28.4 2E+02 0.0067 21.9 13.6 79 264-344 47-132 (153)
209 4fnq_A Alpha-galactosidase AGA 28.3 1.7E+02 0.0059 30.0 8.7 50 257-306 341-411 (729)
210 3ajx_A 3-hexulose-6-phosphate 28.2 1.2E+02 0.0042 25.1 6.6 67 263-329 11-83 (207)
211 2r8e_A 3-deoxy-D-manno-octulos 28.0 1.4E+02 0.0048 24.3 6.8 51 291-342 60-113 (188)
212 4adt_A Pyridoxine biosynthetic 28.0 37 0.0013 31.0 3.2 86 229-331 66-153 (297)
213 1wa3_A 2-keto-3-deoxy-6-phosph 27.8 1.5E+02 0.005 24.6 7.0 64 265-331 25-91 (205)
214 1vzw_A Phosphoribosyl isomeras 27.6 2.3E+02 0.0079 24.1 8.4 67 263-330 147-222 (244)
215 1twi_A Diaminopimelate decarbo 27.6 3.1E+02 0.011 25.7 10.0 49 289-338 91-142 (434)
216 3cg4_A Response regulator rece 27.5 1.4E+02 0.0048 22.2 6.4 50 291-342 68-124 (142)
217 3w01_A Heptaprenylglyceryl pho 27.5 1.5E+02 0.0051 25.9 6.9 66 264-331 144-215 (235)
218 2qsj_A DNA-binding response re 27.5 2E+02 0.0069 21.8 8.4 54 290-345 66-124 (154)
219 4a29_A Engineered retro-aldol 27.5 1.4E+02 0.0049 26.5 6.8 141 168-330 28-180 (258)
220 1pv8_A Delta-aminolevulinic ac 27.3 3E+02 0.01 25.3 9.0 127 206-340 174-328 (330)
221 1thf_D HISF protein; thermophI 26.7 1.9E+02 0.0064 24.8 7.6 66 264-330 153-224 (253)
222 3ipw_A Hydrolase TATD family p 26.3 3.7E+02 0.013 24.5 9.8 54 264-323 156-215 (325)
223 3h5i_A Response regulator/sens 26.3 1.9E+02 0.0064 21.6 6.9 51 291-343 68-122 (140)
224 2nli_A Lactate oxidase; flavoe 25.9 4E+02 0.014 24.7 11.1 41 289-331 217-258 (368)
225 1rd5_A Tryptophan synthase alp 25.8 21 0.00072 31.6 1.1 39 291-330 191-230 (262)
226 2lnd_A De novo designed protei 25.6 1.1E+02 0.0036 22.1 4.5 54 290-345 41-101 (112)
227 2c6q_A GMP reductase 2; TIM ba 25.6 81 0.0028 29.3 5.2 37 291-329 150-188 (351)
228 3to5_A CHEY homolog; alpha(5)b 25.5 2.3E+02 0.008 21.9 10.1 50 291-342 74-130 (134)
229 3sr7_A Isopentenyl-diphosphate 25.5 2E+02 0.0068 26.9 7.9 66 264-331 157-238 (365)
230 1qo2_A Molecule: N-((5-phospho 25.5 2.8E+02 0.0095 23.6 8.5 67 263-330 145-223 (241)
231 3f6c_A Positive transcription 25.2 2E+02 0.0069 21.0 8.8 52 291-344 63-119 (134)
232 4do4_A Alpha-N-acetylgalactosa 25.2 92 0.0032 29.1 5.6 42 290-332 86-141 (400)
233 3n07_A 3-deoxy-D-manno-octulos 25.1 1.7E+02 0.0057 24.3 6.8 50 292-342 60-112 (195)
234 3llv_A Exopolyphosphatase-rela 25.1 2.3E+02 0.0077 21.5 9.8 121 206-344 17-137 (141)
235 3cg0_A Response regulator rece 25.0 2.1E+02 0.0071 21.1 9.0 50 291-342 72-125 (140)
236 3n53_A Response regulator rece 25.0 2.1E+02 0.0073 21.2 8.3 77 265-343 36-120 (140)
237 3khj_A Inosine-5-monophosphate 24.8 3.3E+02 0.011 25.2 9.4 35 296-331 203-237 (361)
238 1h5y_A HISF; histidine biosynt 24.3 2.4E+02 0.0082 23.8 7.9 65 265-330 157-227 (253)
239 3i42_A Response regulator rece 24.3 2.1E+02 0.007 20.8 8.8 52 291-344 64-121 (127)
240 2fli_A Ribulose-phosphate 3-ep 24.2 97 0.0033 26.1 5.1 87 227-327 47-135 (220)
241 2y88_A Phosphoribosyl isomeras 24.1 2.2E+02 0.0075 24.2 7.6 66 264-330 151-225 (244)
242 3ilh_A Two component response 24.1 2.2E+02 0.0076 21.1 12.7 53 291-345 77-139 (146)
243 3l8h_A Putative haloacid dehal 24.0 2.3E+02 0.0078 22.3 7.3 16 291-306 34-49 (179)
244 3h9u_A Adenosylhomocysteinase; 23.9 3.9E+02 0.013 25.6 9.7 69 268-338 60-137 (436)
245 3q94_A Fructose-bisphosphate a 23.9 1.6E+02 0.0055 26.6 6.6 112 205-328 32-177 (288)
246 3lrk_A Alpha-galactosidase 1; 23.8 1.8E+02 0.0063 28.3 7.4 42 290-332 97-151 (479)
247 3ib6_A Uncharacterized protein 23.8 2.8E+02 0.0097 22.2 8.0 38 291-329 41-85 (189)
248 3ve9_A Orotidine-5'-phosphate 23.7 1.1E+02 0.0037 26.3 5.3 103 225-340 34-147 (215)
249 3mm4_A Histidine kinase homolo 23.7 3E+02 0.01 22.5 10.7 52 291-344 136-195 (206)
250 2w6r_A Imidazole glycerol phos 23.7 2.3E+02 0.0078 24.5 7.7 67 264-331 158-230 (266)
251 3hzh_A Chemotaxis response reg 23.5 2.5E+02 0.0085 21.5 11.8 49 291-341 100-153 (157)
252 4f3h_A Fimxeal, putative uncha 23.5 78 0.0027 27.3 4.5 112 205-329 110-240 (250)
253 2z6i_A Trans-2-enoyl-ACP reduc 23.3 4.1E+02 0.014 23.9 9.9 62 269-331 124-192 (332)
254 3ewb_X 2-isopropylmalate synth 23.1 2.1E+02 0.0071 25.7 7.3 52 291-343 125-189 (293)
255 1tv5_A Dhodehase, dihydroorota 23.1 2.5E+02 0.0084 27.0 8.2 68 264-332 313-404 (443)
256 1zfj_A Inosine monophosphate d 23.0 3E+02 0.01 26.4 9.0 92 230-334 262-369 (491)
257 3grc_A Sensor protein, kinase; 22.8 2.3E+02 0.008 20.9 9.3 77 265-343 40-125 (140)
258 3l5a_A NADH/flavin oxidoreduct 22.7 2.6E+02 0.009 26.5 8.3 110 230-341 225-362 (419)
259 3v1h_A 1-phosphatidylinositol 22.7 83 0.0029 28.8 4.5 31 81-111 50-80 (306)
260 1gte_A Dihydropyrimidine dehyd 22.5 7.2E+02 0.024 26.4 12.9 91 231-331 693-817 (1025)
261 2pr7_A Haloacid dehalogenase/e 22.4 1.1E+02 0.0038 22.7 4.8 15 292-306 26-40 (137)
262 3cu2_A Ribulose-5-phosphate 3- 22.1 51 0.0017 28.9 2.9 29 75-106 25-53 (237)
263 3gg7_A Uncharacterized metallo 22.1 3.9E+02 0.013 23.3 12.4 73 264-342 106-186 (254)
264 3fvv_A Uncharacterized protein 22.0 1.5E+02 0.0052 24.4 6.0 39 290-329 98-136 (232)
265 1l6r_A Hypothetical protein TA 21.8 97 0.0033 26.3 4.6 36 290-326 28-63 (227)
266 3nav_A Tryptophan synthase alp 21.7 43 0.0015 30.1 2.3 41 290-331 197-238 (271)
267 3kzp_A LMO0111 protein, putati 21.3 75 0.0026 27.0 3.8 36 290-327 189-224 (235)
268 4hjf_A Ggdef family protein; s 21.3 1.3E+02 0.0043 27.7 5.6 51 290-342 272-328 (340)
269 2qjg_A Putative aldolase MJ040 21.1 3E+02 0.01 23.8 8.0 62 264-329 168-236 (273)
270 2cw6_A Hydroxymethylglutaryl-C 21.0 2.9E+02 0.0099 24.6 7.9 53 291-343 125-195 (298)
271 3a21_A Putative secreted alpha 21.0 1.1E+02 0.0036 30.8 5.3 45 290-334 80-146 (614)
272 1f76_A Dihydroorotate dehydrog 20.9 3.3E+02 0.011 24.6 8.4 39 291-329 192-244 (336)
273 3out_A Glutamate racemase; str 20.9 2.6E+02 0.0088 24.7 7.4 79 169-248 19-100 (268)
274 3o6c_A PNP synthase, pyridoxin 20.8 1.2E+02 0.0042 26.9 5.0 38 290-329 114-151 (260)
275 1viz_A PCRB protein homolog; s 20.8 1.6E+02 0.0053 25.8 5.8 42 288-331 168-211 (240)
276 3cfy_A Putative LUXO repressor 20.7 2.6E+02 0.009 20.7 13.1 77 265-343 38-120 (137)
277 3cnb_A DNA-binding response re 20.7 2.6E+02 0.0088 20.6 13.8 52 291-344 71-129 (143)
278 3ngf_A AP endonuclease, family 20.7 3.9E+02 0.013 22.7 8.9 45 262-306 23-67 (269)
279 1nvm_A HOA, 4-hydroxy-2-oxoval 20.7 2.1E+02 0.0071 26.3 7.0 107 229-344 69-189 (345)
280 3s83_A Ggdef family protein; s 20.7 1.1E+02 0.0037 26.5 4.8 62 268-331 167-238 (259)
281 4avf_A Inosine-5'-monophosphat 20.6 2.9E+02 0.0099 26.8 8.3 60 268-329 234-297 (490)
282 3paj_A Nicotinate-nucleotide p 20.6 4.9E+02 0.017 23.8 11.2 83 230-331 219-304 (320)
283 2gkg_A Response regulator homo 20.3 2.4E+02 0.0083 20.1 10.0 51 291-343 67-123 (127)
No 1
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=1.8e-54 Score=401.36 Aligned_cols=241 Identities=25% Similarity=0.286 Sum_probs=209.6
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT 127 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~ 127 (371)
..+|.+|||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|||. +.|.
T Consensus 9 ~~~p~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~---g~v~ 74 (252)
T 2pz0_A 9 SMKTLVIAHRGDSK-----------NVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGE---GFVK 74 (252)
T ss_dssp --CCEEEEETTTTT-----------TSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSSCC---SBGG
T ss_pred cCCceEEEcCCCCC-----------CCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCCCC---cchh
Confidence 56789999999998 899999999999999999999999999999999999999999999998 9999
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCC-CceEEEEeccCCcccchhHHHHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQ-SVGFNVELKFDDQLVYTEEELTHA 206 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~ 206 (371)
++||+||+++ ++|.|+.+. +.+++||||+|+|+.+++ ++.++||||.+... +. .+
T Consensus 75 ~~t~~eL~~l----~~~~~~~~~--------------~~~~~iPtL~evL~~~~~~~~~l~iEiK~~~~~-~~-----~~ 130 (252)
T 2pz0_A 75 DFTLEEIKKL----DAGIKFGEK--------------FAGERIPTLYEVFELIGDKDFLVNIEIKSGIVL-YP-----GI 130 (252)
T ss_dssp GSCHHHHTTS----CSSTTTCGG--------------GTTCCCCBHHHHHHHHTTSCCEEEEEECCSSCC-CT-----TH
T ss_pred hCcHHHHhhc----CCCCCCCCC--------------CCCCcCCCHHHHHHHhhhcCCeEEEEeCCCCcc-cH-----HH
Confidence 9999999999 466665432 357899999999999974 89999999986431 11 46
Q ss_pred HHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccc
Q 017440 207 LEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI 286 (371)
Q Consensus 207 ~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 286 (371)
++.++++++++++.++++|+||+++.|+.+++..|++++++++..... . ...+++..++.++++++..
T Consensus 131 ~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~--------~---~~~~~~~~~~~~i~~~~~~- 198 (252)
T 2pz0_A 131 EEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLV--------E---PWHMALRMEAYSLHPFYFN- 198 (252)
T ss_dssp HHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCS--------S---THHHHHHTTCSEEEEBGGG-
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccc--------c---HHHHHHHcCCeEEecchhc-
Confidence 788999999999999999999999999999999999999998864311 1 1245677889999887664
Q ss_pred cCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHHh
Q 017440 287 FKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSD 341 (371)
Q Consensus 287 ~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~ 341 (371)
+++++++.+|++|++|++| |+|+++++.+++ ++|||||+||+|..+.+++++
T Consensus 199 -~~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~GvdgIiTD~P~~~~~~l~~ 250 (252)
T 2pz0_A 199 -IIPELVEGCKKNGVKLFPW-TVDRKEDMERMI-KAGVDGIITDDPETLINLVRK 250 (252)
T ss_dssp -CCHHHHHHHHHTTCEECCB-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHC-
T ss_pred -CCHHHHHHHHHCCCEEEEE-CCCCHHHHHHHH-HcCCCEEEcCCHHHHHHHHhh
Confidence 5899999999999999999 999999999986 799999999999999988764
No 2
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=6.6e-54 Score=397.46 Aligned_cols=245 Identities=24% Similarity=0.313 Sum_probs=211.8
Q ss_pred CCCCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccc
Q 017440 46 YKFPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKR 125 (371)
Q Consensus 46 ~~~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~ 125 (371)
+..+.|.+|||||+++ .+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|+|. +.
T Consensus 5 ~~~~~p~iiaHRG~~~-----------~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~---~~ 70 (252)
T 3qvq_A 5 AYSFLPQVIAHRGSSG-----------QAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTDGD---GL 70 (252)
T ss_dssp GGGGCCSEEEETTTTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSSCC---SB
T ss_pred cCCCCCEEEEeCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccCCC---ce
Confidence 4466789999999998 899999999999999999999999999999999999999999999998 99
Q ss_pred ccccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcC-CCceEEEEeccCCcccchhHHHH
Q 017440 126 VTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVD-QSVGFNVELKFDDQLVYTEEELT 204 (371)
Q Consensus 126 i~~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~-~~~~l~iEiK~~~~~~~~~~~~~ 204 (371)
|.++||+||+++ ++|.|+.+. +.+++||||+|+|+.++ .++.++||||..... . .
T Consensus 71 v~~~t~~el~~l----~~~~~~~~~--------------~~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~---~---~ 126 (252)
T 3qvq_A 71 IYKTPLAELKQL----DAGSWKGQE--------------YQQETIPTLLEAIEVISQYGMGLNLELKPCEGL---E---E 126 (252)
T ss_dssp GGGSCHHHHTTS----CSSTTTCGG--------------GTTCCCCBHHHHHHHHHHTTCEEEEEECCCTTC---H---H
T ss_pred eecCcHHHHhcC----CCCCccCcc--------------CCCCcCcCHHHHHHHHhccCcEEEEEecCCCCc---c---H
Confidence 999999999999 567665442 35789999999999997 589999999975431 1 1
Q ss_pred HHHHHHHHHHHHhcCC-CCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccc
Q 017440 205 HALEAILKVVFEHAQG-RPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEV 283 (371)
Q Consensus 205 ~~~~~vl~~l~~~~~~-~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 283 (371)
.+++.+.+++++++.. ++++++||+++.|+.+++..|++++++++.... .. ...+++..++.++++++
T Consensus 127 ~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~--------~~---~~~~~~~~~~~~i~~~~ 195 (252)
T 3qvq_A 127 ETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVSAIP--------SA---WQERLEHLDCAGLHIHQ 195 (252)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECSSCC--------TT---HHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCc--------hh---HHHHHHHcCCeEEecch
Confidence 4567788888888764 689999999999999999999999999986421 11 23456677889998876
Q ss_pred ccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHHhhh
Q 017440 284 RAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSDFI 343 (371)
Q Consensus 284 ~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~~ 343 (371)
.. +++++++.+|++|++|++| |||++++|.+++ ++|||||+||+|..+++++++..
T Consensus 196 ~~--~~~~~v~~~~~~G~~v~~W-Tvn~~~~~~~l~-~~GVdgIiTD~P~~~~~~l~~~~ 251 (252)
T 3qvq_A 196 SF--FDVQQVSDIKAAGYKVLAF-TINDESLALKLY-NQGLDAVFSDYPQKIQSAIDSHI 251 (252)
T ss_dssp GG--CCHHHHHHHHHTTCEEEEE-CCCCHHHHHHHH-HTTCCEEEESSHHHHHHHHHHCC
T ss_pred hh--CCHHHHHHHHHCCCEEEEE-cCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHhc
Confidence 64 5999999999999999999 999999999996 79999999999999999998753
No 3
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=4.7e-53 Score=391.24 Aligned_cols=243 Identities=18% Similarity=0.206 Sum_probs=209.5
Q ss_pred CceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccccc
Q 017440 50 KFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVTDI 129 (371)
Q Consensus 50 ~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~~~ 129 (371)
.|.||||||+++ .+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|+|. +.|.++
T Consensus 2 mp~iiaHRG~~~-----------~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~---g~v~~~ 67 (250)
T 3ks6_A 2 MTRIASHRGGTL-----------EFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDMT---GAIVDM 67 (250)
T ss_dssp CCEEEEETTTHH-----------HHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBSCC---SBGGGS
T ss_pred CceEEECCCCCC-----------CCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccCCC---CeeecC
Confidence 478999999987 899999999999999999999999999999999999999999999998 999999
Q ss_pred CHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcC-CCceEEEEeccCCcc-cchhHHHHHHH
Q 017440 130 TLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVD-QSVGFNVELKFDDQL-VYTEEELTHAL 207 (371)
Q Consensus 130 T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~-~~~~l~iEiK~~~~~-~~~~~~~~~~~ 207 (371)
||+||++++ +|.| .+++||||+|+|+.++ +++.++||||.+... .+. .++
T Consensus 68 t~~el~~l~----~~~~-------------------~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~-----~~~ 119 (250)
T 3ks6_A 68 TLAKVKTAT----IRYG-------------------AGSHPMTLEELCALYVDSHVNFRCEIKPGVDGLPYE-----GFV 119 (250)
T ss_dssp CHHHHHHCC----BTTS-------------------TTCCCEEHHHHHHHHTTCSCEEEEEECCCTTSCCCT-----THH
T ss_pred cHHHHhcCC----CCCC-------------------CCccCcCHHHHHHHHhccCcEEEEEeCCCcccCcch-----HHH
Confidence 999999994 3432 4589999999999997 689999999986321 111 467
Q ss_pred HHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccccc
Q 017440 208 EAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIF 287 (371)
Q Consensus 208 ~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 287 (371)
++++++++++++.++++++||+++.|..+++..|+++++++..... ....+....++++..++..+++++..
T Consensus 120 ~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-- 191 (250)
T 3ks6_A 120 ALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVL------QQLGPGAVIETAIAHSIHEIGVHIDT-- 191 (250)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHH------HHHHHHHHHHHHHHTTCCEEEEEGGG--
T ss_pred HHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccc------cccchhHHHHHHHhcCCCEEecchhh--
Confidence 8999999999999999999999999999999999999987653100 00123345567788899988877654
Q ss_pred CChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHHhhhc
Q 017440 288 KNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSDFIK 344 (371)
Q Consensus 288 ~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~~~ 344 (371)
+++++++.+|++|++|++| |||++++|.+++ ++|||||+||+|+.++++++++..
T Consensus 192 ~~~~~v~~~~~~G~~V~~W-Tvn~~~~~~~l~-~~GVDgIiTD~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 192 ADAGLMAQVQAAGLDFGCW-AAHTPSQITKAL-DLGVKVFTTDRPTLAIALRTEHRM 246 (250)
T ss_dssp CCHHHHHHHHHTTCEEEEE-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEE-eCCCHHHHHHHH-HcCCCEEEcCCHHHHHHHHHHhhc
Confidence 5999999999999999999 999999999986 799999999999999999987643
No 4
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=3.1e-53 Score=391.87 Aligned_cols=238 Identities=19% Similarity=0.251 Sum_probs=204.3
Q ss_pred CCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCccccccccc
Q 017440 49 PKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVTD 128 (371)
Q Consensus 49 ~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~~ 128 (371)
+.|.+|||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|||. +.|.+
T Consensus 5 ~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~~~---g~v~~ 70 (247)
T 2otd_A 5 PYPRIVAHRGGGK-----------LAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNGW---GVAGE 70 (247)
T ss_dssp CCCSEEETTTTTT-----------SSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSSCC---SBGGG
T ss_pred CCCeEEECCCCCC-----------CCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCCCC---ccHhh
Confidence 3478999999998 899999999999999999999999999999999999999999999998 99999
Q ss_pred cCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcC-CCceEEEEeccCCcccchhHHHHHHH
Q 017440 129 ITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVD-QSVGFNVELKFDDQLVYTEEELTHAL 207 (371)
Q Consensus 129 ~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~-~~~~l~iEiK~~~~~~~~~~~~~~~~ 207 (371)
+|++||+++ ++|+|+.+. +.+++||||+|+|+.++ .++.++||+|.+.... ..++
T Consensus 71 ~t~~eL~~l----~~g~~~~~~--------------~~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~------~~~~ 126 (247)
T 2otd_A 71 LNWQDLLRV----DAGSWYSKA--------------FKGEPLPLLSQVAERCREHGMMANIEIKPTTGTG------PLTG 126 (247)
T ss_dssp SCHHHHTTC----CSSTTTCGG--------------GTTCCCCBHHHHHHHHHHTTCEEEEEECCCTTCH------HHHH
T ss_pred CcHHHHhhC----CCCCccCCC--------------CCCCcCCCHHHHHHHHHhcCCEEEEEECCCCCcc------hHHH
Confidence 999999999 567665442 35789999999999997 6899999999865321 1356
Q ss_pred HHHHHHHHHh--cCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc
Q 017440 208 EAILKVVFEH--AQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA 285 (371)
Q Consensus 208 ~~vl~~l~~~--~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 285 (371)
+.++++++++ ++. +++++||+++.+..+++..|++++++++.... ..+ .++++..++.++++++..
T Consensus 127 ~~v~~~l~~~~~~~~-~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~--------~~~---~~~~~~~~~~~i~~~~~~ 194 (247)
T 2otd_A 127 KMVALAARQLWAGMT-PPLLSSFEIDALEAAQQAAPELPRGLLLDEWR--------DDW---RELTARLGCVSIHLNHKL 194 (247)
T ss_dssp HHHHHHHHHHTTTSC-CCEEEESCHHHHHHHHHHCTTSCEEEEESSCC--------TTH---HHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHhcCcC-CEEEEcCCHHHHHHHHHHCCCCCEEEEecCCc--------ccH---HHHHHHcCCeEEecChHh
Confidence 7888888887 445 89999999999999999999999999986421 112 245667788999887664
Q ss_pred ccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 286 IFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 286 ~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
+++++++.+|++|+.|++| |+|+++++.+++ ++|||||+||+|..+.++|+
T Consensus 195 --~~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~GvdgI~TD~p~~~~~~l~ 245 (247)
T 2otd_A 195 --LDKARVMQLKDAGLRILVY-TVNKPQHAAELL-RWGVDCICTDAIDVIGPNFT 245 (247)
T ss_dssp --CCHHHHHHHHHTTCEEEEE-CCCCHHHHHHHH-HHTCSEEEESCTTTSCTTCC
T ss_pred --CCHHHHHHHHHCCCEEEEE-ccCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHh
Confidence 5899999999999999999 999999999986 79999999999998876543
No 5
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=3.2e-52 Score=393.33 Aligned_cols=255 Identities=20% Similarity=0.315 Sum_probs=208.3
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHH-HhCCCCEEEEEEeeecCCeEEEecCCCcccccCCccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAA-ARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRV 126 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A-~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i 126 (371)
..+|.+|||||+++ .+||||++||++| ++.|+|+||+|||+||||++||+||.+++|+|||. +.|
T Consensus 21 ~~~~~iiAHRG~~~-----------~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~---g~v 86 (287)
T 2oog_A 21 NERFTTIAHRGASG-----------YAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGH---GKV 86 (287)
T ss_dssp SCSSEEEETTTTTT-----------TSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSSCC---SBG
T ss_pred CCcceEEecCCCCC-----------CCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCCCC---eeh
Confidence 56789999999998 8999999999999 69999999999999999999999999999999998 999
Q ss_pred cccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCCCceEEEEeccCCcccchhHHHHHH
Q 017440 127 TDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFDDQLVYTEEELTHA 206 (371)
Q Consensus 127 ~~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 206 (371)
.++||+||+++ ++|+|+.+.++... ...+.+++||||+|+|+.+++++.++||||.+... . .+
T Consensus 87 ~d~T~~eL~~l----~~~~~f~~~~p~~~------~~~~~~~~iPtL~evL~~~~~~~~l~IEiK~~~~~--~-----~~ 149 (287)
T 2oog_A 87 EDYTLDELKQL----DAGSWFNKKYPKYA------RASYKNAKVPTLDEILERYGPNANYYIETKSPDVY--P-----GM 149 (287)
T ss_dssp GGSCHHHHTTS----CSSHHHHHHCGGGC------CGGGTTCCCCBHHHHHHHHCTTSCEEEECCCTTTS--T-----TH
T ss_pred hhCcHHHHHhc----CCCcccCccCcccc------ccccCCccCCCHHHHHHhhCcCceEEEEECCCCCc--c-----hH
Confidence 99999999999 56766543222110 01235789999999999998889999999986431 1 35
Q ss_pred HHHHHHHHHHhcC-------CCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceE
Q 017440 207 LEAILKVVFEHAQ-------GRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGI 279 (371)
Q Consensus 207 ~~~vl~~l~~~~~-------~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 279 (371)
+++++++++++++ .++++|+||+++.|..+++..|++++++++...... .. . ...++.. ...+.++
T Consensus 150 ~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~--~~---~-~~~~~~~-~~~~~~v 222 (287)
T 2oog_A 150 EEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQ--QF---N-DQRLKEI-RSYAIGL 222 (287)
T ss_dssp HHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGG--GC---C-HHHHHHH-HTTCSEE
T ss_pred HHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCccc--cc---C-HHHHHHH-hhhheEE
Confidence 6789999999998 889999999999999999999999999988643210 00 1 1112222 2235677
Q ss_pred ecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHHhhhc
Q 017440 280 VSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSDFIK 344 (371)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~~~ 344 (371)
++++.. +++++++.+|++|+.|++| |||++++|.+++ ++||||||||+|+.+.+++.+-..
T Consensus 223 ~~~~~~--~~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~GVdgIiTD~P~~~~~~~~~~~~ 283 (287)
T 2oog_A 223 GPDYTD--LTEQNTHHLKDLGFIVHPY-TVNEKADMLRLN-KYGVDGVFTNFADKYKEVIKEGHH 283 (287)
T ss_dssp EEBGGG--CCHHHHHHHHHTTCEECCB-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHHC---
T ss_pred cccHhh--cCHHHHHHHHHCCCeEEEE-eCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHhcccc
Confidence 776654 5999999999999999999 999999999986 799999999999999999887543
No 6
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=1e-51 Score=394.43 Aligned_cols=266 Identities=20% Similarity=0.241 Sum_probs=212.6
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccc----cCCcc--
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTK----DEGEI-- 121 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~----t~g~~-- 121 (371)
..++.||||||+++ .+||||++||+.|++.|+|+||+|||+||||++||+||.+|+|+ ++|+.
T Consensus 15 ~~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~~G~~~~ 83 (313)
T 3l12_A 15 PSVVRVIGHRGARG-----------VMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDGQGHWLT 83 (313)
T ss_dssp TTBCEEEEETTTTT-----------TSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCTTSCBCC
T ss_pred CCCeEEEEcCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhcccccccCCCcccC
Confidence 45689999999998 89999999999999999999999999999999999999999998 44531
Q ss_pred -ccccccccCHHHHhccCCCCCCCCc-----CCccccccCCCccccccccCCCCccCHHHHHHhcCC----CceEEEEec
Q 017440 122 -IEKRVTDITLAEFLSYGPQNDPENV-----GKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQ----SVGFNVELK 191 (371)
Q Consensus 122 -~~~~i~~~T~~eL~~l~~~~~~g~~-----~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~----~~~l~iEiK 191 (371)
.++.|.++||+||++++ +|.| +.+.|+.. ....+++||||+|+|+.++. ++.++||||
T Consensus 84 ~~~~~v~~~t~~eL~~l~----~~~~~~~~~~~~~~~~~--------~~~~g~~iptL~evl~~~~~~~~~~~~l~IEiK 151 (313)
T 3l12_A 84 GAERQVAEMTYAEIRALD----VGGLDGRTVYGRRFPDQ--------AFLTGIHVPRLGELLDLCAGYGDQAPYLLLELK 151 (313)
T ss_dssp SSCCBGGGSCHHHHHTSB----CSSCCTTSHHHHHSTTS--------CCCSSCCCCBHHHHHHHHHTTGGGCCEEEEEEC
T ss_pred CCCcchhcCcHHHHhhCC----CCCccccccccccCccc--------cccCCCcCCCHHHHHHHHHhcCCCCceEEEEEc
Confidence 13589999999999994 5542 11222210 11256899999999999974 799999999
Q ss_pred cCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccC---------CCC--
Q 017440 192 FDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCT---------DVR-- 260 (371)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~---------~~~-- 260 (371)
.+..........+.++++++++++++++.++++|+||+++.|+.+++..|+++++++......... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
T 3l12_A 152 SDPALMHDHAARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYD 231 (313)
T ss_dssp CCGGGTTCHHHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTT
T ss_pred cCCccccccccHHHHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccccch
Confidence 875321111122367899999999999999999999999999999999999999999865431000 000
Q ss_pred --cccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHH
Q 017440 261 --RSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEA 338 (371)
Q Consensus 261 --~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~ 338 (371)
...+ ...++..++.++++++.. +++++|+.+|++|++|++| |||++++|.+++ ++||||||||+|+.++++
T Consensus 232 ~~~~~l---~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~Gl~V~~W-TVn~~~~~~~l~-~~GVDgIiTD~P~~~~~~ 304 (313)
T 3l12_A 232 RMTESL---PQAVASAGGQLWCPYFLD--VTPELVAEAHDLGLIVLTW-TVNEPEDIRRMA-TTGVDGIVTDYPGRTQRI 304 (313)
T ss_dssp TCCSCH---HHHHHHHTCSEEEEBGGG--CCHHHHHHHHHTTCEEEEB-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHH
T ss_pred hccccH---HHHHHHhCCcEEecchhc--CCHHHHHHHHHCCCEEEEE-cCCCHHHHHHHH-HcCCCEEEeCCHHHHHHH
Confidence 0112 234556678888887654 6999999999999999999 999999999996 799999999999999999
Q ss_pred HHhhh
Q 017440 339 VSDFI 343 (371)
Q Consensus 339 l~~~~ 343 (371)
+++..
T Consensus 305 l~~~g 309 (313)
T 3l12_A 305 LIDMG 309 (313)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 98753
No 7
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=7.6e-52 Score=384.97 Aligned_cols=239 Identities=18% Similarity=0.243 Sum_probs=205.1
Q ss_pred CCCceEEecCCCC--CCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCC---CcccccCCccc
Q 017440 48 FPKFVVMGHRGSG--MNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDN---FIFTKDEGEII 122 (371)
Q Consensus 48 ~~~~~iiAHRG~~--~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~---~L~r~t~g~~~ 122 (371)
..+|.||||||++ + .+||||++||++|++.|+|+||+|||+||||++||+||. +++|+|||.
T Consensus 4 ~~~~~iiaHRG~~~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~-- 70 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEG-----------LAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGT-- 70 (258)
T ss_dssp CCCCEEEEETTTTTST-----------TSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTTT--
T ss_pred ccCceEEECCCCCCCC-----------CCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCCC--
Confidence 3567899999999 6 799999999999999999999999999999999999999 999999998
Q ss_pred cccccccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCC---CceEEEEeccCCcc-cc
Q 017440 123 EKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQ---SVGFNVELKFDDQL-VY 198 (371)
Q Consensus 123 ~~~i~~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~---~~~l~iEiK~~~~~-~~ 198 (371)
+.|.++||+||++++. | .+++||||+|+|+.++. ++.++||+|.+... .+
T Consensus 71 -g~v~~~t~~eL~~l~~----~---------------------~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~ 124 (258)
T 2o55_A 71 -SRIGDLSLEELKRLDV----G---------------------GGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKRKE 124 (258)
T ss_dssp -CBGGGSCHHHHTTCBS----S---------------------SSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSSTT
T ss_pred -eehhhCcHHHHhhcCC----C---------------------CCCccCCHHHHHHHhhhhcCceEEEEEEccCCccccc
Confidence 9999999999999842 2 46899999999999974 79999999986520 11
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEc-CCCCcccCCCCcccHHHHHHHHHhCCCc
Q 017440 199 TEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLT-NGGAQTCTDVRRSSLDEAIKVCLAGGLQ 277 (371)
Q Consensus 199 ~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (371)
. .+++.++++++++++.++++|+||+++.+..++++.|++++++++ ..... +. .+.+..++..++.
T Consensus 125 ~-----~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~---~~-----~~~~~~~~~~~~~ 191 (258)
T 2o55_A 125 S-----GDHQRLLLLVEKYHMQERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQP---TP-----LDFVEQACYGDAN 191 (258)
T ss_dssp S-----SHHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCC---CC-----TTHHHHHHHTTCS
T ss_pred h-----HHHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCC---CH-----HHHHHHHHhcCCe
Confidence 1 467889999999999999999999999999999999999999998 43211 11 1112336678888
Q ss_pred eEecccccccCChHHHHHHHHhCCeEEEeccc----CChHHHHHHHHhcCceEEEeCChHHHHHHHHhh
Q 017440 278 GIVSEVRAIFKNPGAIKKIKEAKLCLVSYGEL----NNVPEVVYMQRFMGIEGVIVDLVSEITEAVSDF 342 (371)
Q Consensus 278 ~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtv----n~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~ 342 (371)
++++++.. +++++++.+|++|+.|++| |+ |+++++.+++ ++|||||+||+|..+.+++++.
T Consensus 192 ~v~~~~~~--~~~~~v~~~~~~G~~v~~w-Tv~~~~n~~~~~~~l~-~~GvdgI~TD~p~~~~~~l~~~ 256 (258)
T 2o55_A 192 GVSMLFHY--LTKEQVCTAHEKGLSVTVW-MPWIFDDSEEDWKKCL-ELQVDLICSNYPFGLMNFLSNI 256 (258)
T ss_dssp EEEEEGGG--CCHHHHHHHHHTTCEEEEE-CCTTCCCCHHHHHHHH-HHTCSEEEESCHHHHHHHHTC-
T ss_pred EEecChhh--cCHHHHHHHHHCCCEEEEe-eCCCCCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHh
Confidence 99887664 5899999999999999999 99 9999999986 7999999999999999988643
No 8
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2.8e-51 Score=384.00 Aligned_cols=249 Identities=18% Similarity=0.233 Sum_probs=205.1
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCccc----ccCCcc--
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFT----KDEGEI-- 121 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r----~t~g~~-- 121 (371)
..++.+|||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++| +|||+.
T Consensus 6 ~~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~ 74 (272)
T 3ch0_A 6 PASFDIQGHRGCRG-----------LLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVT 74 (272)
T ss_dssp CTTCEEEETTTTTT-----------TSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECC
T ss_pred cccccEEecCCCCC-----------CCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCcccc
Confidence 44678999999998 8999999999999999999999999999999999999999998 677752
Q ss_pred ----ccccccccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCC---CceEEEEeccCC
Q 017440 122 ----IEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQ---SVGFNVELKFDD 194 (371)
Q Consensus 122 ----~~~~i~~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~---~~~l~iEiK~~~ 194 (371)
.++.|.++||+||+++ ++|.|+.+.|+... ..+++||||+|+|+.++. ++.++||||.+.
T Consensus 75 ~~~~~~~~v~d~t~~eL~~l----~~~~~~~~~~~~~~---------~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~ 141 (272)
T 3ch0_A 75 EANEKNFNLYAMNYADIKEI----DVGMKTHPRFKSQK---------KVPAVKPLFRELIETAEKLSAKIQYNGEIKSTV 141 (272)
T ss_dssp TTTGGGSBGGGSCHHHHTTS----CCSSSCCTTCTTSC---------CCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCG
T ss_pred cccccCceeecCCHHHHHhc----CCCCccCccCcccc---------cCCCCCcCHHHHHHHHHHhCCCceEEEEECCCc
Confidence 2358999999999999 56777655543211 123489999999999974 799999999875
Q ss_pred cccch-hHHHHHHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHh
Q 017440 195 QLVYT-EEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLA 273 (371)
Q Consensus 195 ~~~~~-~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (371)
..... ....+.++++++++++++++.++++|+||+++.|+.++++.|+++++++.... ..+. ++++.
T Consensus 142 ~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~---------~~~~---~~~~~ 209 (272)
T 3ch0_A 142 EGDNIDHPNIALFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETK---------GTLK---KQLEK 209 (272)
T ss_dssp GGBTTTBCCHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSEEEEEECSS---------CCHH---HHHTT
T ss_pred CcccccCccHHHHHHHHHHHHHHcCCCCcEEEEeCCHHHHHHHHHHCCCCcEEEEecCC---------CCHH---HHHHH
Confidence 31100 00113578899999999999999999999999999999999999999998642 1222 34556
Q ss_pred CCC--ceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHH
Q 017440 274 GGL--QGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEIT 336 (371)
Q Consensus 274 ~~~--~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~ 336 (371)
.++ .++++++.. +++++++.+|++|+.|++| |+|+++++.+++ ++||||||||+|..++
T Consensus 210 ~~~~~~~i~~~~~~--~~~~~v~~~~~~Gl~v~~w-Tvn~~~~~~~l~-~~GvdgIiTD~P~~~~ 270 (272)
T 3ch0_A 210 LSFTPAVYSPDVTL--VSKKDIDAAHKLGMRVIPW-TVNTKEEIETLI-SLGVDGIITDYPDLFF 270 (272)
T ss_dssp SSSCCSEEEEBGGG--CCHHHHHHHHHTTCEECCB-CCCSHHHHHHHH-HHTCSEEEESCGGGGT
T ss_pred cCCCCcEEccchhh--cCHHHHHHHHHcCCEEEEe-ccCCHHHHHHHH-HcCCCEEEeCCHHHHh
Confidence 676 788877654 5999999999999999999 999999999886 7999999999999864
No 9
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=7.8e-51 Score=373.62 Aligned_cols=234 Identities=22% Similarity=0.220 Sum_probs=200.6
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT 127 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~ 127 (371)
.++|.+|||||++++ +.+||||++||+.|++.|+|+||+|||+||||++||+||.+++| +.|.
T Consensus 2 ~~~~~iiaHRG~~~~---------~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~--------~~v~ 64 (238)
T 3no3_A 2 KDNTKVIAHRGYWKT---------EGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG--------KHIQ 64 (238)
T ss_dssp CCCCEEEETTSSCSS---------TTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT--------EEGG
T ss_pred CCCCeEEeCCCCCCC---------CCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC--------CChH
Confidence 356899999999411 17999999999999999999999999999999999999999975 5799
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCC--CceEEEEeccCCcccchhHHHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQ--SVGFNVELKFDDQLVYTEEELTH 205 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~--~~~l~iEiK~~~~~~~~~~~~~~ 205 (371)
++||+||++++. ..+++||||+|+|+.++. ++.++||||.+... .....
T Consensus 65 ~~t~~el~~l~~-------------------------~~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~----~~~~~ 115 (238)
T 3no3_A 65 SCTYDELKDLQL-------------------------SNGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTP----ERNRD 115 (238)
T ss_dssp GSCHHHHTTCBC-------------------------TTSCBCCBHHHHHHHHHHCTTCEEEEEECCCSSH----HHHHH
T ss_pred hCCHHHHhhCCC-------------------------CCCCcCCcHHHHHHHHhhcCCceEEEEeCCCCCc----chhHH
Confidence 999999999842 146899999999999973 69999999987531 11135
Q ss_pred HHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc
Q 017440 206 ALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA 285 (371)
Q Consensus 206 ~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 285 (371)
+++.++++++++++.++++++||+++.|..+++..|+++++++.... .. ..++..++.++++++..
T Consensus 116 ~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~----------~~----~~~~~~~~~~~~~~~~~ 181 (238)
T 3no3_A 116 AARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGEL----------SP----MELKELGFTGLDYHYKV 181 (238)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCS----------CH----HHHHHTTCCEEEEEHHH
T ss_pred HHHHHHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCC----------CH----HHHHHCCCceEeccHHh
Confidence 78899999999999999999999999999999999999999987532 11 23566788888877665
Q ss_pred ccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHHhhh
Q 017440 286 IFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSDFI 343 (371)
Q Consensus 286 ~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~~ 343 (371)
...++++++.+|++|++|++| |||++++|.+++ ++|||||+||+|+.++++++++.
T Consensus 182 ~~~~~~~v~~~~~~G~~v~~W-TVn~~~~~~~l~-~~GVdgIiTD~P~~~~~~l~~r~ 237 (238)
T 3no3_A 182 LQSHPDWVKDCKVLGMTSNVW-TVDDPKLMEEMI-DMGVDFITTDLPEETQKILHSRA 237 (238)
T ss_dssp HHHSTTHHHHHHHTTCEEEEE-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHHHHT
T ss_pred hhCCHHHHHHHHHCCCEEEEE-CCCCHHHHHHHH-HcCCCEEECCCHHHHHHHHHhcc
Confidence 445889999999999999999 999999999996 79999999999999999998763
No 10
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=2.7e-52 Score=385.77 Aligned_cols=233 Identities=16% Similarity=0.141 Sum_probs=203.7
Q ss_pred ceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCccccccccccC
Q 017440 51 FVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVTDIT 130 (371)
Q Consensus 51 ~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~~~T 130 (371)
|.||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|||. +.|.++|
T Consensus 2 ~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~~~---g~v~~~t 67 (248)
T 1zcc_A 2 TKIVSHRGANR-----------FAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGT---GPVGHML 67 (248)
T ss_dssp CEEEETTTTTT-----------TSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSCC---SBSTTSC
T ss_pred CeEEECCCCCC-----------CCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccCCC---cchhhCC
Confidence 57999999998 899999999999999999999999999999999999999999999998 9999999
Q ss_pred HHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCC-CceEEEEeccCCcccchhHHHHHHHHH
Q 017440 131 LAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQ-SVGFNVELKFDDQLVYTEEELTHALEA 209 (371)
Q Consensus 131 ~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~~~~ 209 (371)
++||++++ +|+ +++||||+|+|+.++. ++.++||+|.+....+ .+++.
T Consensus 68 ~~eL~~l~----~g~---------------------~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~------~~~~~ 116 (248)
T 1zcc_A 68 SSEIDTLD----AGG---------------------WFDDRFKGAIVPRLDAYLEHLRGRAGVYIELKY------CDPAK 116 (248)
T ss_dssp HHHHTTSC----SST---------------------TTCGGGTTCCCCBHHHHHHHHTTTCEEEEEEEE------SCHHH
T ss_pred HHHHHhCC----CCC---------------------CCCCCCHHHHHHHHHhcCcEEEEEeCCCCCccc------HHHHH
Confidence 99999984 332 3489999999999985 6899999998643111 14678
Q ss_pred HHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccC-
Q 017440 210 ILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFK- 288 (371)
Q Consensus 210 vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 288 (371)
++++++++++.++++|+||+++.+..+++..|++++++++.... . ...+++..++.++++++.. +
T Consensus 117 v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~---------~---~~~~~~~~~~~~i~~~~~~--~~ 182 (248)
T 1zcc_A 117 VAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAK---------S---PSLVGAVHHASIIEITPAQ--MR 182 (248)
T ss_dssp HHHHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHS---------S---THHHHHTTCCSEEEECHHH--HH
T ss_pred HHHHHHHhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCc---------c---HHHHHHHcCCCEEEecHHH--hC
Confidence 88999999999999999999999999999999999999875321 1 1356677889999887653 5
Q ss_pred ChHHHHHHHHhCCeEEEecccCChHHHHH-HHHhcCceEEEeCChHHHHHHHHhhhc
Q 017440 289 NPGAIKKIKEAKLCLVSYGELNNVPEVVY-MQRFMGIEGVIVDLVSEITEAVSDFIK 344 (371)
Q Consensus 289 ~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~-l~~~~GVdgIiTD~p~~l~~~l~~~~~ 344 (371)
++++++.+|++|+.|++| |+|+++++.+ ++ ++|||||+||+|..+++++++...
T Consensus 183 ~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~~l~-~~GvdgIiTD~p~~~~~~~~~~~~ 237 (248)
T 1zcc_A 183 RPGIIEASRKAGLEIMVY-YGGDDMAVHREIA-TSDVDYINLDRPDLFAAVRSGMAE 237 (248)
T ss_dssp SHHHHHHHHHHTCEEEEE-CCCCCHHHHHHHH-HSSCSEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEE-CCCCHHHHHHHHH-HcCCCEEEECCHHHHHHHHHHhcc
Confidence 899999999999999999 9999999999 75 799999999999999999886544
No 11
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=1.3e-49 Score=364.52 Aligned_cols=219 Identities=23% Similarity=0.305 Sum_probs=187.3
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT 127 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~ 127 (371)
.....||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|||. +.|.
T Consensus 10 ~~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~---g~v~ 75 (234)
T 1o1z_A 10 HHHVIVLGHRGYSA-----------KYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLD---VKIR 75 (234)
T ss_dssp CCCCEEEEETTTTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCEE---EEGG
T ss_pred cceEEEEEcCCCCC-----------CCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCCcC---cCcc
Confidence 45578999999998 899999999999999999999999999999999999999999999997 9999
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCCCceEEEEeccCCcccchhHHHHHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFDDQLVYTEEELTHAL 207 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 207 (371)
++||+||++++ +++||||+|+|+.+++++.++||+|.+. ++
T Consensus 76 d~T~~eL~~l~----------------------------~~~iptL~evL~~~~~~~~l~iEiK~~~-----------~~ 116 (234)
T 1o1z_A 76 DATVSELKELT----------------------------DGKITTLKEVFENVSDDKIINIEIKERE-----------AA 116 (234)
T ss_dssp GSCHHHHHHHT----------------------------TTCCCBHHHHHHHSCTTSEEEEEECCGG-----------GH
T ss_pred cCcHHHHhcCC----------------------------CCCCCCHHHHHHhcccCCeEEEEeCCcc-----------HH
Confidence 99999999982 4789999999999987799999999752 35
Q ss_pred HHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCC---CceEecccc
Q 017440 208 EAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGG---LQGIVSEVR 284 (371)
Q Consensus 208 ~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~ 284 (371)
+++++++++ .++++++||+ ++.+++..|++++++++..... ..+. .++...+ +.++++++.
T Consensus 117 ~~v~~~l~~---~~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~-------~~~~---~~~~~~~~~~~~~i~~~~~ 180 (234)
T 1o1z_A 117 DAVLEISKK---RKNLIFSSFD---LDLLDEKFKGTKYGYLIDEENY-------GSIE---NFVERVEKERPYSLHVPYQ 180 (234)
T ss_dssp HHHHHHHTT---CCSEEEEESC---HHHHHHHCTTSCEEEECCTTTT-------CSHH---HHHHHHHHHCCSEEEEEGG
T ss_pred HHHHHHHhc---cCCEEEEchh---HHHHHhhCCCCcEEEEeccccc-------cCHH---HHHHHcCCCCCCEEEeCHH
Confidence 677788877 6799999999 8999999999999999864211 0122 2233333 378887766
Q ss_pred cccCC--hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHH
Q 017440 285 AIFKN--PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEA 338 (371)
Q Consensus 285 ~~~~~--~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~ 338 (371)
.+-.+ +++++.+|++|++|++| |+|+++++.+++ ++ ||||+||+|+.++++
T Consensus 181 ~~g~~~~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 181 AFELEYAVEVLRSFRKKGIVIFVW-TLNDPEIYRKIR-RE-IDGVITDEVELFVKL 233 (234)
T ss_dssp GGGSHHHHHHHHHHHHTTCEEEEE-SCCCHHHHHHHG-GG-CSEEEESCHHHHHHT
T ss_pred HhcCCccHHHHHHHHHcCCEEEEe-CCCCHHHHHHHH-Hh-CCEEEcCCHHHHhhc
Confidence 43115 89999999999999999 999999999986 78 999999999998865
No 12
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=8.4e-49 Score=369.88 Aligned_cols=235 Identities=17% Similarity=0.189 Sum_probs=196.5
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT 127 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~ 127 (371)
..+|.||||||+++ ..+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|+|. +.|.
T Consensus 29 ~~~~~iiaHRG~~~----------~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~~---g~v~ 95 (292)
T 3mz2_A 29 DRIPLISGHRGGRG----------KGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSNGT---GKVS 95 (292)
T ss_dssp TCCCEEEEGGGCCB----------TTBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBSCC---SCGG
T ss_pred CCCCEEEECCCCCC----------CCCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCCCC---Cchh
Confidence 56799999999974 1589999999999999999999999999999999999999999999997 9999
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCCCceEEEEeccCCcccchhHHHHHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFDDQLVYTEEELTHAL 207 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 207 (371)
++|++||++++. +.++. ...+++||||+|+|+.+++++.++||+|... .
T Consensus 96 ~~t~~el~~l~~----~~~~~---------------~~~~~~iptL~evl~~~~~~~~l~iE~K~~~------------~ 144 (292)
T 3mz2_A 96 DYTWEELQNFRL----KDPEG---------------NITNYRIPTLEEAIRWARGKTILILDKKDVP------------M 144 (292)
T ss_dssp GSCHHHHTTSCB----BCTTC---------------CBCSCCCCBHHHHHHHHTTTCCEEECCSSSC------------H
T ss_pred hCcHHHHhcCCC----CCCCC---------------ccCCcCCCCHHHHHHHhCCCcEEEEEECCCc------------H
Confidence 999999999953 32210 1356899999999999988899999999853 3
Q ss_pred HHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCC------ceEec
Q 017440 208 EAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGL------QGIVS 281 (371)
Q Consensus 208 ~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~ 281 (371)
+.++++++++++.++++++||+++.++.+++..|++++++++.. ... +......++ ..+++
T Consensus 145 ~~v~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~------------~~~-l~~~~~~g~~~~~~~~~~~~ 211 (292)
T 3mz2_A 145 ERTAQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKT------------KEA-VQDYEDNGIPWSHIMAYVGP 211 (292)
T ss_dssp HHHHHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCS------------HHH-HHHHHHTTCCGGGEEEEEES
T ss_pred HHHHHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCC------------HHH-HHHHHHhCCChhheeeeecc
Confidence 57888999999999999999999999999999999999998742 111 122233343 23444
Q ss_pred ccccccCChHHHHHHHHhCCeEEEecccCCh----------HHHHHHHHhcCceEEEeCChHHHHHHHHhhh
Q 017440 282 EVRAIFKNPGAIKKIKEAKLCLVSYGELNNV----------PEVVYMQRFMGIEGVIVDLVSEITEAVSDFI 343 (371)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~----------~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~~ 343 (371)
.+. ..++++|+.+|++|++|++| |+|+. ++|.+++ ++|||||+||+|..+.++|+++.
T Consensus 212 ~~~--~~~~~~V~~ah~~G~~V~vW-Tv~t~d~~~~~~~~~~~~~~L~-~~GVDgIiTD~P~~l~~~L~~~~ 279 (292)
T 3mz2_A 212 KIT--PEVREVIDMLHERGVMCMIS-TAPSDDKLSTPESRAEAYRMII-RQGVDIIESDRPIEVAEAISSLI 279 (292)
T ss_dssp SCC--HHHHHHHHHHHHTTBCEEEE-CTTTGGGSSSHHHHHHHHHHHH-HTTCCEEEESCHHHHHHHHGGGS
T ss_pred ccc--ccCHHHHHHHHHCCCEEEEE-eCCCcchhhhccccHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHhc
Confidence 333 34789999999999999999 99874 4777876 79999999999999999998764
No 13
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=8.1e-49 Score=380.71 Aligned_cols=273 Identities=18% Similarity=0.219 Sum_probs=197.7
Q ss_pred ccccccccCCCCCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccc
Q 017440 37 EDCDETKSGYKFPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTK 116 (371)
Q Consensus 37 ~~~~~~~~~~~~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~ 116 (371)
..|..++.. ..+|.+|||||+++ .+||||++||+.|++.|+|+||+|||+||||++||+||.+|+|+
T Consensus 19 ~~c~~~~~~--~~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rt 85 (356)
T 1ydy_A 19 MGSSAMAAD--SNEKIVIAHRGASG-----------YLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRV 85 (356)
T ss_dssp ------------CCCEEEETTTTTT-----------TSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTT
T ss_pred hhhhhcccc--CCCceEEEeCCCCC-----------CCCcchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCChHHhh
Confidence 455555444 56789999999998 89999999999999999999999999999999999999999999
Q ss_pred cC------------CccccccccccCHHHHhccCCCCCCCCcCCccccccCCCcc---cc--c-cccCCCCccCHHHHHH
Q 017440 117 DE------------GEIIEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRI---FE--W-KVEKDTPLCTLQEAFE 178 (371)
Q Consensus 117 t~------------g~~~~~~i~~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~---~~--~-~~~~~~~iptL~evL~ 178 (371)
|| |. +.|.++||+||+++ ++|.|+.+. +|+. |+ + ....+++||||+|+|+
T Consensus 86 t~~~~~f~~~~~~~g~---~~v~d~T~~eL~~l----~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~iptL~evl~ 153 (356)
T 1ydy_A 86 TDVADRFPDRARKDGR---YYAIDFTLDEIKSL----KFTEGFDIE-----NGKKVQTYPGRFPMGKSDFRVHTFEEEIE 153 (356)
T ss_dssp BSHHHHSTTCCCTTSC---CBGGGSCHHHHHHS----CBCSCEEEE-----TTEEEESSTTSSCTTCSCCCCCBHHHHHH
T ss_pred cCcccccccccccCCC---cchhhCcHHHHHhC----CCCcccccc-----ccccccccccccccccCCCcCCCHHHHHH
Confidence 98 54 78999999999999 456554320 0000 00 0 0124689999999999
Q ss_pred hcC-------CCceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcC---CCCeEEecCCHHHHHHHHHH-----CCCC
Q 017440 179 KVD-------QSVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQ---GRPIMFSSFQPDAALLIRKL-----QSTY 243 (371)
Q Consensus 179 ~~~-------~~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~---~~~v~i~Sf~~~~l~~l~~~-----~p~~ 243 (371)
.++ .++.++||||.+...... ...+++.++++++++++ .++++|+||+++.|+++++. .|++
T Consensus 154 ~~~~~~~~~~~~~~l~iEiK~~~~~~~~---~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~p~~ 230 (356)
T 1ydy_A 154 FVQGLNHSTGKNIGIYPEIKAPWFHHQE---GKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMEL 230 (356)
T ss_dssp HHHHHHHHHSCCCEEEEEECCHHHHHHT---TCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTCCC
T ss_pred HHHHhhhcccCCceEEEeecCccccccc---chhHHHHHHHHHHHcCCCCCCCCEEEEcCCHHHHHHHHhhcccccCCCc
Confidence 996 378999999975311000 01367889999999987 57999999999999999998 7999
Q ss_pred CeEEEcCCCCccc----------CCCCcccH--HHHHHHHHhCCCceEeccccccc---------CChHHHHHHHHhCCe
Q 017440 244 PVFFLTNGGAQTC----------TDVRRSSL--DEAIKVCLAGGLQGIVSEVRAIF---------KNPGAIKKIKEAKLC 302 (371)
Q Consensus 244 ~~~~l~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~v~~~~~~Gl~ 302 (371)
++++++....... ........ ...+... ...+.++++++..+. .++++|+.+|++|++
T Consensus 231 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~ 309 (356)
T 1ydy_A 231 NLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQV-AEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLV 309 (356)
T ss_dssp EEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHH-TTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCE
T ss_pred eEEEEeccCcccccccccccccccccchhhhcchhhHHHH-HhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCE
Confidence 9999875321000 00000000 0111111 224677887765432 348999999999999
Q ss_pred EEEecccCCh---------HHH-HHHHHhcCceEEEeCChHHHHHHH
Q 017440 303 LVSYGELNNV---------PEV-VYMQRFMGIEGVIVDLVSEITEAV 339 (371)
Q Consensus 303 v~~wgtvn~~---------~~~-~~l~~~~GVdgIiTD~p~~l~~~l 339 (371)
|++| |||++ +++ .+++.++||||||||+|+.+.+++
T Consensus 310 V~~W-Tvn~~~l~~~~~d~~~~~~~~l~~~GVDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 310 VHPY-TVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFL 355 (356)
T ss_dssp ECCB-CBCTTSCCTTCSSHHHHHHHHHTTSCCSEEEESCHHHHHHHH
T ss_pred EEEE-EECcccccccccCHHHHHHHHHHHcCCCEEEeCCHHHHHHhh
Confidence 9999 99864 677 443347999999999999998876
No 14
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=9.3e-49 Score=356.76 Aligned_cols=216 Identities=26% Similarity=0.290 Sum_probs=187.5
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT 127 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~ 127 (371)
.++|.+|||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++ . |.|.
T Consensus 5 ~~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~-----~---g~v~ 65 (224)
T 1vd6_A 5 RQRPLRLGHRGAPL-----------KAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP-----L---GPVF 65 (224)
T ss_dssp --CCEEEEETSCTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET-----T---EEGG
T ss_pred CCCceEEECCCCCC-----------CCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC-----C---CChh
Confidence 45689999999998 899999999999999999999999999999999999999997 2 6799
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcC--CCceEEEEeccCCcccchhHHHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVD--QSVGFNVELKFDDQLVYTEEELTH 205 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~--~~~~l~iEiK~~~~~~~~~~~~~~ 205 (371)
++||+||++++ ++||||+|+|+.++ .++.++||+|.+... + ..
T Consensus 66 ~~t~~eL~~l~-----------------------------~~iptL~evl~~~~~~~~~~l~iEiK~~~~~-~-----~~ 110 (224)
T 1vd6_A 66 QVDYADLKAQE-----------------------------PDLPRLEEVLALKEAFPQAVFNVELKSFPGL-G-----EE 110 (224)
T ss_dssp GSCHHHHHHHS-----------------------------TTCCBHHHHHGGGGTCTTCEEEEEECCCTTS-H-----HH
T ss_pred hCCHHHHHhcC-----------------------------CCCCCHHHHHHhhhccCCceEEEEECCCCCc-c-----HH
Confidence 99999999981 68999999999997 579999999986532 1 13
Q ss_pred HHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc
Q 017440 206 ALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA 285 (371)
Q Consensus 206 ~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 285 (371)
+++++++++++ .++++++||+++.+..+++..|++++++++.... ..+++..++.++++++..
T Consensus 111 ~~~~v~~~l~~---~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~--------------~~~~~~~~~~~i~~~~~~ 173 (224)
T 1vd6_A 111 AARRLAALLRG---REGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH--------------SALLPCLGVEAVHPHHAL 173 (224)
T ss_dssp HHHHHHHHTTT---CSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC--------------GGGGGGSCCSEEEEBGGG
T ss_pred HHHHHHHHHhc---CCcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc--------------HHHHHHcCCcEEecCccc
Confidence 56788888876 6789999999999999999999999999886421 123456788899887664
Q ss_pred ccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHH
Q 017440 286 IFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEA 338 (371)
Q Consensus 286 ~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~ 338 (371)
+++++++.+|++|+.|++| |+|+++++.+++ ++|||||+||+|..+.++
T Consensus 174 --~~~~~v~~~~~~G~~v~~w-tvn~~~~~~~l~-~~GvdgI~TD~p~~~~~~ 222 (224)
T 1vd6_A 174 --VTEEAVAGWRKRGLFVVAW-TVNEEGEARRLL-ALGLDGLIGDRPEVLLPL 222 (224)
T ss_dssp --CCHHHHHHHHHTTCEEEEE-CCCCHHHHHHHH-HTTCSEEEESCHHHHTTS
T ss_pred --CCHHHHHHHHHCCCEEEEE-eCCCHHHHHHHH-hcCCCEEEcCCHHHHHHh
Confidence 5899999999999999999 999999999986 799999999999988654
No 15
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2e-45 Score=343.76 Aligned_cols=245 Identities=16% Similarity=0.132 Sum_probs=196.7
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT 127 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~ 127 (371)
..++.||||||+++ .+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|+|. +.|.
T Consensus 15 ~~~~~iiaHRG~~~-----------~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~---g~v~ 80 (278)
T 3i10_A 15 SNKVLVVAHRGNWR-----------SAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTGK---GEIK 80 (278)
T ss_dssp CCSCEEEEETSCTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSCC---SBGG
T ss_pred CCCCEEEECCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCCCC---ceee
Confidence 56789999999998 899999999999999999999999999999999999999999999998 9999
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCCCceEEEEeccCCcccchhHHHHHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFDDQLVYTEEELTHAL 207 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 207 (371)
++||+||++++ +|.++. ...+++||||+|+|+.+++++.++||.+. .++
T Consensus 81 ~~t~~el~~l~----~~~~~~---------------~~~~~~iptL~evl~~~~~~~~~nie~~~------------~~~ 129 (278)
T 3i10_A 81 NWTLADIKKLK----LKDKDG---------------KVTNYVVPTLEEALLTAKGKIMVNLDKAY------------DIF 129 (278)
T ss_dssp GSCHHHHTTSC----BBCTTS---------------CBCSCCCCBHHHHHHHHTTTSEEEEESCG------------GGH
T ss_pred cCcHHHHhcCC----CCCCCc---------------ccCCCCCCCHHHHHHHhcCCeEEEEecCc------------hHH
Confidence 99999999995 443321 13578999999999999888899999431 357
Q ss_pred HHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccc-
Q 017440 208 EAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI- 286 (371)
Q Consensus 208 ~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 286 (371)
++++++++++++.++++++|+ ..++.+++..|+++.++++..... ...........+++...+..++.+.+...
T Consensus 130 ~~v~~~l~~~~~~~~v~i~s~--~~l~~~~~~~p~~~~~~l~~p~i~---~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~ 204 (278)
T 3i10_A 130 DDVYAILEKTETQNQVIMKGG--QPIETVKREFGSYLDKVLYMPVID---LGNKEAEKIITDYLKELRPAAFEIIYSDPK 204 (278)
T ss_dssp HHHHHHHHHHTCGGGEEEEES--SCHHHHHHHHGGGTTTSEEEEEEE---TTSTTHHHHHHHHHHHTCCSEEEEEBCCTT
T ss_pred HHHHHHHHHcCCCCeEEEEEh--HHHHHHHHHCcCCccceEEEeeec---ccccchHHHHHHHHHhcCceEEEEeecCCc
Confidence 889999999999999999994 358899999999887776542110 00112234445666667766655444322
Q ss_pred cCChHHHHHHHHhCCeEEEecc--------------cCChH-HHHHHHHhc-CceEEEeCChHHHHHHHHhhhc
Q 017440 287 FKNPGAIKKIKEAKLCLVSYGE--------------LNNVP-EVVYMQRFM-GIEGVIVDLVSEITEAVSDFIK 344 (371)
Q Consensus 287 ~~~~~~v~~~~~~Gl~v~~wgt--------------vn~~~-~~~~l~~~~-GVdgIiTD~p~~l~~~l~~~~~ 344 (371)
...+++++.+|++|++|++| | ++|+. .|.+++ ++ |||+|+||+|..+.++|++...
T Consensus 205 ~~~~~~v~~~~~~g~~v~~n-Tlw~~~~~g~~d~~a~~d~~~~~~~l~-~~~Gvd~I~TD~P~~l~~yL~~~~~ 276 (278)
T 3i10_A 205 NPLPPKIKQLLFKKSLIWYN-TLWGSLAGNHDDNLALTDPEKSYGYLI-EQLGARILQTDQPAYLLDYLRKKGW 276 (278)
T ss_dssp CSSHHHHHHHHTTTSEEEEE-CSSGGGBTTCCHHHHHHCHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTS
T ss_pred cchHHHHHHHHHCCCEEEEE-ecccccccCccchhhccChHHHHHHHH-hcCCCCEEEeCCHHHHHHHHhhccc
Confidence 23478999999999999999 7 45655 577776 68 9999999999999999987643
No 16
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=100.00 E-value=3.2e-38 Score=297.22 Aligned_cols=225 Identities=10% Similarity=0.073 Sum_probs=171.1
Q ss_pred ceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCC---cccccCCcccccccc
Q 017440 51 FVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNF---IFTKDEGEIIEKRVT 127 (371)
Q Consensus 51 ~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~---L~r~t~g~~~~~~i~ 127 (371)
+.||||| |||++||+.|++.|||+||+|||+ |||++||+||.+ ++|+|+|. +.|.
T Consensus 7 ~~iiaHr------------------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~~---g~v~ 64 (285)
T 1xx1_A 7 IWNLAHM------------------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCIRW---EYFN 64 (285)
T ss_dssp EEEEESC------------------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSCCE---EEHH
T ss_pred cEEEEeh------------------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccCCC---ccHH
Confidence 4899997 699999999999999999999999 999999999999 99999998 9999
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCCCceEEEEeccCCcccchhH--HHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFDDQLVYTEE--ELTH 205 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~~~~--~~~~ 205 (371)
++ ++||++++. ++. |+|++.|+ .++||||.+.... ... ....
T Consensus 65 d~-l~eL~~l~~------~~~----------------------~~~~~~L~------~l~iEiK~~~~~~-~~~~~~~~~ 108 (285)
T 1xx1_A 65 VF-LKTLREYTT------PGN----------------------AKYRDGFI------LFVLDLKTGSLSN-DQVRPAGEN 108 (285)
T ss_dssp HH-HHHHHHHTS------TTC----------------------TTCCTTCC------EEEEEECCTTCCH-HHHHHHHHH
T ss_pred HH-HHHHHHccc------CCC----------------------Cccccccc------EEEEecCCCcccc-cccchhhhh
Confidence 99 999999953 111 22323221 8999999875321 100 0001
Q ss_pred HHHHHHHHHHHhcCC----CC----eEEecCCHHHHHH-HHHH-------CCCCCeEEEcCCCCcccCCCCcccHHHHHH
Q 017440 206 ALEAILKVVFEHAQG----RP----IMFSSFQPDAALL-IRKL-------QSTYPVFFLTNGGAQTCTDVRRSSLDEAIK 269 (371)
Q Consensus 206 ~~~~vl~~l~~~~~~----~~----v~i~Sf~~~~l~~-l~~~-------~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 269 (371)
++++ ++++++.. .+ ++++||++..+.. +++. .|.+++++++.....+ ....+.....
T Consensus 109 ~~~~---ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~----~~~~~~~~~~ 181 (285)
T 1xx1_A 109 VAKE---LLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYLP----SLPTLDATHE 181 (285)
T ss_dssp HHHH---HHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCSS----SCCCHHHHHH
T ss_pred HHHH---HHHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEeccccccc----chhhHHHHHH
Confidence 2223 56666655 67 9999999999999 9999 9999999998643110 0112444455
Q ss_pred HHHhCCCceEeccc----------c-cccCChHHHHHHHHhCC--eEEEecccCChHHHHHHHHhcCceEEEeCChHHHH
Q 017440 270 VCLAGGLQGIVSEV----------R-AIFKNPGAIKKIKEAKL--CLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEIT 336 (371)
Q Consensus 270 ~~~~~~~~~v~~~~----------~-~~~~~~~~v~~~~~~Gl--~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~ 336 (371)
+++..++.+ ++.. . ...+++.+++.+|++|+ +|++| |||++++|.+++ ++||||||||+|+.+.
T Consensus 182 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~W-Tvn~~~~~~~l~-~~GVDgIiTD~P~~~~ 258 (285)
T 1xx1_A 182 AYKKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYW-SVDKVSTTKAAL-DVGVDGIMTNYPNVLI 258 (285)
T ss_dssp HHHHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEE-CCCSHHHHHHHH-HHTCSEEEESCHHHHH
T ss_pred HHHHhCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEe-eCCCHHHHHHHH-hcCCCEEEeCCHHHHH
Confidence 666666655 4310 1 12347889999999999 99999 999999999996 7999999999999999
Q ss_pred HHHHhhh
Q 017440 337 EAVSDFI 343 (371)
Q Consensus 337 ~~l~~~~ 343 (371)
+++++..
T Consensus 259 ~~l~~~~ 265 (285)
T 1xx1_A 259 GVLKESG 265 (285)
T ss_dssp HHHHSTT
T ss_pred HHHhhhc
Confidence 9988653
No 17
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.91 E-value=2.4e-23 Score=192.02 Aligned_cols=228 Identities=14% Similarity=0.119 Sum_probs=151.8
Q ss_pred CCCceEEecCCCCCCccCCchhhhcccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCcccccCCcccccccc
Q 017440 48 FPKFVVMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT 127 (371)
Q Consensus 48 ~~~~~iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L~r~t~g~~~~~~i~ 127 (371)
.+|+.+|||| |||++||+.|++.||++||+||++|+||++|++||.+...+.........+.
T Consensus 26 ~rp~~~i~H~------------------vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~~~~ 87 (302)
T 3rlg_A 26 RRPIWIMGAM------------------VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKKYENFN 87 (302)
T ss_dssp CEEEEEEESC------------------CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCCBHH
T ss_pred CCceEEEeeh------------------hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCCCccHH
Confidence 4566899994 6999999999999999999999999999999999986643211110114566
Q ss_pred ccCHHHHhccCCCCCCCCcCCccccccCCCccccccccCCCCccCHHHHHHhcCCCceEEEEeccCCcccchh-HHHHHH
Q 017440 128 DITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFDDQLVYTE-EELTHA 206 (371)
Q Consensus 128 ~~T~~eL~~l~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~~~-~~~~~~ 206 (371)
+ .+++|++... +|. +.|+ .+=+.+.+|+|.+....... ..-..+
T Consensus 88 ~-~l~~lr~~tt---pg~---~k~~----------------------------~~l~lv~~DlK~~~l~~~~~~~aG~~l 132 (302)
T 3rlg_A 88 D-FLKGLRSATT---PGN---SKYQ----------------------------EKLVLVVFDLKTGSLYDNQANDAGKKL 132 (302)
T ss_dssp H-HHHHHHHHHS---TTS---TTCC----------------------------TTCCEEEEEECGGGSCGGGHHHHHHHH
T ss_pred H-HHHHHHHhcC---CCC---Cccc----------------------------cceEEEEEEcCCCCCCHHHHHHhHHHH
Confidence 6 6778877631 111 1111 02468999999876432221 223356
Q ss_pred HHHHHHHHHHhc---CCCCeEEecCCHHHHHHHHHHC-----CCC-----CeEEEcCCCCcccCCCCcccHHHHHHHHHh
Q 017440 207 LEAILKVVFEHA---QGRPIMFSSFQPDAALLIRKLQ-----STY-----PVFFLTNGGAQTCTDVRRSSLDEAIKVCLA 273 (371)
Q Consensus 207 ~~~vl~~l~~~~---~~~~v~i~Sf~~~~l~~l~~~~-----p~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (371)
++++++.+.+.+ ..-.|++|+|+.+-++.|+... ..+ .+++-+... ..+....+..+.
T Consensus 133 a~kLl~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n---------~dl~~i~~~~~~ 203 (302)
T 3rlg_A 133 AKNLLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGN---------DDIGDVGKAYKK 203 (302)
T ss_dssp HHHHHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSC---------CCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCC---------CCHHHHHHHHHh
Confidence 677777777643 3346899999987666665432 111 233333221 246666677777
Q ss_pred CCCce-------EecccccccCChHHHHHHHHh-----C--CeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHH
Q 017440 274 GGLQG-------IVSEVRAIFKNPGAIKKIKEA-----K--LCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAV 339 (371)
Q Consensus 274 ~~~~~-------v~~~~~~~~~~~~~v~~~~~~-----G--l~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l 339 (371)
.|+.+ |... ++.+...++.+.+. | ++|++| |||++++|++++ ++||||||||+|+.+++++
T Consensus 204 ~Gi~~h~wqsDGItnC---~~r~~~rl~~ai~~RDs~~~~i~~V~vW-TVNd~~~m~~l~-~~GVDGIITD~Pd~l~~~l 278 (302)
T 3rlg_A 204 AGITGHIWQSDGITNC---LPRGLSRVNAAVANRDSANGFINKVYYW-TVDKRSTTRDAL-DAGVDGIMTNYPDVITDVL 278 (302)
T ss_dssp TTCCSCBEEEEECCTT---SCCCSHHHHHHHHHHTSTTCCCSEEEEE-CCCSHHHHHHHH-HTTCSEEEESCHHHHHHHH
T ss_pred cCCcCcEEecCCcccc---eeccHHHHHHHHHhccCCCCceEEEEEE-eCCCHHHHHHHH-HcCCCEEECCCHHHHHHHH
Confidence 77653 3222 12344444444433 4 789999 999999999997 7999999999999999998
Q ss_pred Hhh
Q 017440 340 SDF 342 (371)
Q Consensus 340 ~~~ 342 (371)
++.
T Consensus 279 ~~~ 281 (302)
T 3rlg_A 279 NEA 281 (302)
T ss_dssp TSH
T ss_pred Hhc
Confidence 754
No 18
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=95.84 E-value=0.0053 Score=63.07 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=38.3
Q ss_pred ccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCc
Q 017440 73 SIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI 113 (371)
Q Consensus 73 ~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L 113 (371)
..-+-|.++|..|+..||.+||+|+|=-.||+|||+|..|+
T Consensus 188 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tl 228 (624)
T 1djx_A 188 LTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTF 228 (624)
T ss_dssp SSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSC
T ss_pred ccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCcc
Confidence 45678999999999999999999999999999999999987
No 19
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=95.51 E-value=0.0086 Score=63.19 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=37.7
Q ss_pred ccccchHHHHHHHHhCCCCEEEEEEeeec--CCeEEEecCCCc
Q 017440 73 SIKENTILSFNAAARHPLDFIEFDVQVTR--DGCPVIFHDNFI 113 (371)
Q Consensus 73 ~~PENTl~Af~~A~~~Gad~IE~DV~lTk--DG~lVv~HD~~L 113 (371)
..-+-|.++|..|+..||.+||+|+|=-. ||+|||+|..|+
T Consensus 336 l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tl 378 (799)
T 2zkm_X 336 FSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTM 378 (799)
T ss_dssp SSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSS
T ss_pred ccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCcc
Confidence 45578999999999999999999999887 999999999987
No 20
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=95.12 E-value=0.013 Score=61.86 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=37.8
Q ss_pred ccccchHHHHHHHHhCCCCEEEEEEeeecCCeEEEecCCCc
Q 017440 73 SIKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI 113 (371)
Q Consensus 73 ~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~~L 113 (371)
..-+-|.++|..|+..||.+||+|+|=-.||+|||+|..|+
T Consensus 347 l~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tl 387 (816)
T 3qr0_A 347 LTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTM 387 (816)
T ss_dssp TTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSS
T ss_pred ccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCcc
Confidence 34577889999999999999999999999999999999987
No 21
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=94.33 E-value=0.025 Score=60.01 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=36.2
Q ss_pred cccchHHHHHHHHhCCCCEEEEEEeee--cCCeEEEecCCCc
Q 017440 74 IKENTILSFNAAARHPLDFIEFDVQVT--RDGCPVIFHDNFI 113 (371)
Q Consensus 74 ~PENTl~Af~~A~~~Gad~IE~DV~lT--kDG~lVv~HD~~L 113 (371)
.-+-|.++|..|+..||.+||+|+|=- .||+|||+|..|+
T Consensus 341 ~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~ 382 (885)
T 3ohm_B 341 AGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTM 382 (885)
T ss_dssp EECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSE
T ss_pred cCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCcc
Confidence 456789999999999999999999965 7899999999987
No 22
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=92.86 E-value=0.67 Score=43.03 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=30.7
Q ss_pred HHHHHHHHhCCCCEEEEEEeeec-CCeEEEecCCCccc
Q 017440 79 ILSFNAAARHPLDFIEFDVQVTR-DGCPVIFHDNFIFT 115 (371)
Q Consensus 79 l~Af~~A~~~Gad~IE~DV~lTk-DG~lVv~HD~~L~r 115 (371)
...+..|++.|+.+||+||+-.. .|.+-|+|...+..
T Consensus 45 ~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~ 82 (339)
T 3h4x_A 45 YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGN 82 (339)
T ss_dssp CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSC
T ss_pred cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCcccc
Confidence 35689999999999999999875 55799999877643
No 23
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.86 E-value=1.1 Score=38.60 Aligned_cols=94 Identities=13% Similarity=0.006 Sum_probs=61.0
Q ss_pred cCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCC-hHHHHHHHHhCCeEEE
Q 017440 227 SFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKN-PGAIKKIKEAKLCLVS 305 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~v~~~~~~Gl~v~~ 305 (371)
++..+.++.+|+..++.|+..-... . ......++.+...|++++.++....... .++++.+++.|+++.+
T Consensus 38 ~~g~~~i~~ir~~~~~~~i~~~~~~-----~----~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 38 REGVNAIKAIKEKYPHKEVLADAKI-----M----DGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEE-----C----SCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred hccHHHHHHHHHhCCCCEEEEEEEe-----c----cchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEE
Confidence 4567889999998788887542211 0 1123346778889999988764321001 5688899999999875
Q ss_pred e-cccCCh-HHHHHHHHhcCceEEEeC
Q 017440 306 Y-GELNNV-PEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 306 w-gtvn~~-~~~~~l~~~~GVdgIiTD 330 (371)
- .++.++ +.+.++. +.|+|.|.++
T Consensus 109 ~~~~~~t~~~~~~~~~-~~g~d~i~v~ 134 (211)
T 3f4w_A 109 DMICVDDLPARVRLLE-EAGADMLAVH 134 (211)
T ss_dssp ECTTCSSHHHHHHHHH-HHTCCEEEEE
T ss_pred EecCCCCHHHHHHHHH-HcCCCEEEEc
Confidence 2 134454 3355554 7999999876
No 24
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=89.07 E-value=7.5 Score=33.28 Aligned_cols=143 Identities=12% Similarity=0.105 Sum_probs=92.1
Q ss_pred CCCccCHHHHHHhcC---CCceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHC-CC
Q 017440 167 DTPLCTLQEAFEKVD---QSVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQ-ST 242 (371)
Q Consensus 167 ~~~iptL~evL~~~~---~~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~-p~ 242 (371)
+..|.+|+++.+.++ +.+.+++|+=.. -... + .-++.+.+. .. .-.+.|-....+...++.. ..
T Consensus 37 ~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~G--ls~d-----~---~ai~fL~~~-~~-pdGIIsTk~~~i~~Ak~~gL~t 104 (192)
T 3kts_A 37 ETHVAQLKALVKYAQAGGKKVLLHADLVNG--LKND-----D---YAIDFLCTE-IC-PDGIISTRGNAIMKAKQHKMLA 104 (192)
T ss_dssp SEETTTHHHHHHHHHHTTCEEEEEGGGEET--CCCS-----H---HHHHHHHHT-TC-CSEEEESCHHHHHHHHHTTCEE
T ss_pred cCcHHHHHHHHHHHHHcCCeEEEecCchhc--cCCc-----H---HHHHHHHhC-CC-CCEEEeCcHHHHHHHHHCCCeE
Confidence 457889999999987 233444443221 1111 1 112333332 11 2245566888888887752 23
Q ss_pred CCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHh
Q 017440 243 YPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRF 321 (371)
Q Consensus 243 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~ 321 (371)
++++|+.++ .++...++..+....+.+-.-.. +-|++++++++. +.++.+=|-+++.++....+ +
T Consensus 105 IqR~FliDS----------~al~~~~~~i~~~~PD~iEiLPG---i~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al-~ 170 (192)
T 3kts_A 105 IQRLFMIDS----------SAYNKGVALIQKVQPDCIELLPG---IIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVI-A 170 (192)
T ss_dssp EEEEECCSH----------HHHHHHHHHHHHHCCSEEEEECT---TCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHH-T
T ss_pred EEEEEEEEc----------chHHHHHHHHhhcCCCEEEECCc---hhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHH-H
Confidence 556666653 35677788888877776532211 347888888655 78899999999999999986 7
Q ss_pred cCceEEEeCChHHH
Q 017440 322 MGIEGVIVDLVSEI 335 (371)
Q Consensus 322 ~GVdgIiTD~p~~l 335 (371)
.|+++|.|-.....
T Consensus 171 aGA~aVsTs~~~LW 184 (192)
T 3kts_A 171 SGAIAVTTSNKHLW 184 (192)
T ss_dssp TTEEEEEECCGGGG
T ss_pred cCCeEEEeCCHHHh
Confidence 99999999887653
No 25
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=87.34 E-value=4.1 Score=36.94 Aligned_cols=107 Identities=9% Similarity=0.127 Sum_probs=58.7
Q ss_pred HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEE-Eeccc
Q 017440 231 DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLV-SYGEL 309 (371)
Q Consensus 231 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~-~wgtv 309 (371)
+.++.+|+..+++|+.++.+... +....+++.++.+...|++++...--..--..++++.++++|+.+. .- +.
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~-----v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lv-ap 159 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANL-----VYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIA-PP 159 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHH-----HHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEE-CT
T ss_pred HHHHHHHhcCCCCCEEEEecCcH-----HHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEE-CC
Confidence 45666666667888877653211 1112457778888899999965432111124578899999999844 43 45
Q ss_pred CCh-HHHHHHHHh----------cCceEEEeCChHHHHHHHHhhh
Q 017440 310 NNV-PEVVYMQRF----------MGIEGVIVDLVSEITEAVSDFI 343 (371)
Q Consensus 310 n~~-~~~~~l~~~----------~GVdgIiTD~p~~l~~~l~~~~ 343 (371)
+++ +.+..+... .|+.|.-+..+..+.+++++..
T Consensus 160 ~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr 204 (271)
T 3nav_A 160 TASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQ 204 (271)
T ss_dssp TCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHH
Confidence 544 444444211 4677877777776766666543
No 26
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.15 E-value=15 Score=32.22 Aligned_cols=141 Identities=11% Similarity=0.054 Sum_probs=81.7
Q ss_pred HHHHHHhc--CCCceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcC
Q 017440 173 LQEAFEKV--DQSVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTN 250 (371)
Q Consensus 173 L~evL~~~--~~~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~ 250 (371)
++++.+.+ ++++.+.+.-.... +.... ....++.....+.|... +.+ -+.+.++.+|+.. ++|+.-+..
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~--pl~~~---~~~~~~A~a~~~~Ga~~-i~~--~~~~~i~~ir~~v-~~Pvig~~k 77 (229)
T 3q58_A 7 LARLEQSVHENGGLIVSCQPVPGS--PMDKP---EIVAAMAQAAASAGAVA-VRI--EGIENLRTVRPHL-SVPIIGIIK 77 (229)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTS--TTCSH---HHHHHHHHHHHHTTCSE-EEE--ESHHHHHHHGGGC-CSCEEEECB
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCC--CCCCc---chHHHHHHHHHHCCCcE-EEE--CCHHHHHHHHHhc-CCCEEEEEe
Confidence 55666666 45555555444322 21111 22344455555555432 333 4577888888764 688653332
Q ss_pred CC-C--cccCCCCcccHHHHHHHHHhCCCceEecccccc---cCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCc
Q 017440 251 GG-A--QTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI---FKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGI 324 (371)
Q Consensus 251 ~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GV 324 (371)
.. . ..+-+ ..+++ +..+...|++.|.+..... ....++++.+|+.|+.+.+- +.+.++..++. +.|+
T Consensus 78 ~~~~~~~~~I~---~~~~~-i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~--v~t~eea~~a~-~~Ga 150 (229)
T 3q58_A 78 RDLTGSPVRIT---PYLQD-VDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMAD--CSTVNEGISCH-QKGI 150 (229)
T ss_dssp CCCSSCCCCBS---CSHHH-HHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEE--CSSHHHHHHHH-HTTC
T ss_pred ecCCCCceEeC---ccHHH-HHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEe--cCCHHHHHHHH-hCCC
Confidence 11 0 01111 12333 4456778999887654321 11247899999999998884 77888888875 7999
Q ss_pred eEEEe
Q 017440 325 EGVIV 329 (371)
Q Consensus 325 dgIiT 329 (371)
|.|.+
T Consensus 151 d~Ig~ 155 (229)
T 3q58_A 151 EFIGT 155 (229)
T ss_dssp SEEEC
T ss_pred CEEEe
Confidence 99964
No 27
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=86.43 E-value=1.9 Score=39.22 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=65.8
Q ss_pred ecCCHHHHHHHHHHCC---CCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc-ccC-------------
Q 017440 226 SSFQPDAALLIRKLQS---TYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA-IFK------------- 288 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~------------- 288 (371)
..-|.-+++..++..| ++|+..=++.. |+. ......++..+..|+.|+ .++.. -++
T Consensus 75 gnaN~iv~e~~~evlp~v~~iPV~Agv~~~-----DP~-~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm 147 (286)
T 2p10_A 75 GNANQIVVDMAREVLPVVRHTPVLAGVNGT-----DPF-MVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGM 147 (286)
T ss_dssp EEHHHHHHHHHHHHGGGCSSSCEEEEECTT-----CTT-CCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHhhhccCCCCCEEEEECCc-----CCC-cCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCC
Confidence 3344455555666655 46766544332 111 245566677888999988 55441 011
Q ss_pred ----ChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCCh
Q 017440 289 ----NPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 289 ----~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p 332 (371)
--++|+.+|+.|+...+| ++++++.+.+. ++|+|.|+..-|
T Consensus 148 ~~~~eve~I~~A~~~gL~Ti~~--v~~~eeA~amA-~agpDiI~~h~g 192 (286)
T 2p10_A 148 SYAQEVEMIAEAHKLDLLTTPY--VFSPEDAVAMA-KAGADILVCHMG 192 (286)
T ss_dssp CHHHHHHHHHHHHHTTCEECCE--ECSHHHHHHHH-HHTCSEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCeEEEe--cCCHHHHHHHH-HcCCCEEEECCC
Confidence 136899999999999998 77888888885 799999999888
No 28
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=86.34 E-value=3.2 Score=42.89 Aligned_cols=69 Identities=12% Similarity=0.072 Sum_probs=49.2
Q ss_pred cHHHHHHHHHhCCCceEec---ccccc--c---C--------------ChHHHHHHHHhCCeEEEecccCCh------HH
Q 017440 263 SLDEAIKVCLAGGLQGIVS---EVRAI--F---K--------------NPGAIKKIKEAKLCLVSYGELNNV------PE 314 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~---~~~~~--~---~--------------~~~~v~~~~~~Gl~v~~wgtvn~~------~~ 314 (371)
...+.+.||.+.|+.++.+ +..+- . - -+++++.++++|+.++.| .--.. .+
T Consensus 372 ~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw-~~t~~~~~n~e~~ 450 (738)
T 2d73_A 372 NVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMH-HETSASVRNYERH 450 (738)
T ss_dssp HHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEE-EECTTBHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEE-EcCCCchhhHHHH
Confidence 4577899999999999888 32211 0 0 268999999999999999 32221 22
Q ss_pred HH---HHHHhcCceEEEeCCh
Q 017440 315 VV---YMQRFMGIEGVIVDLV 332 (371)
Q Consensus 315 ~~---~l~~~~GVdgIiTD~p 332 (371)
|. +++.++||.||=+|+.
T Consensus 451 ~d~~f~~~~~~Gv~GVKvdF~ 471 (738)
T 2d73_A 451 MDKAYQFMADNGYNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCcc
Confidence 22 2335799999999999
No 29
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=85.72 E-value=1.4 Score=34.23 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=46.1
Q ss_pred HHHHHHHHHhCCCceEecccccccCChHHHHHHHHh-------CCeEEEecccCChHHHHHHHHhcCceEEEeCChHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA-------KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSE 334 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~-------Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~ 334 (371)
+...+.-++..|..-+..+.-..+.-++++..++++ |+.++.| --++.+.|.+-+.+..+||+++=.-+.
T Consensus 21 fRk~fkD~R~~GskKvviNvis~~~y~e~v~~~REAiLDNIDlG~el~~W-Kp~eVdkm~~k~~q~~~dGl~iYCDde 97 (126)
T 2rbg_A 21 FRKIFLDVRSSGSKKTTINVFTEIQYQELVTLIREALLENIDIGYELFLW-KKNEVDIFLKNLEKSEVDGLLVYCDDE 97 (126)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECSSCHHHHHHHTHHHHHHTTTSEEEEEEE-CGGGHHHHHHHHTTCCCCEEEEEECGG
T ss_pred HHHHHHHHHhcCCceEEEEEecCCcHHHHHHHHHHHHHhccccceEEEEe-CHHHHHHHHHHHHHhCCCceEEEeCCC
Confidence 444566677778765554432222345677777765 8999999 788777765544568999998744333
No 30
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=85.13 E-value=1.9 Score=44.00 Aligned_cols=71 Identities=13% Similarity=0.205 Sum_probs=51.1
Q ss_pred cHHHHHHHHHhCCCceEeccccccc-------------CChHHHHHHHHhCCeEEEecc----cCChHHHHHHHHhcCce
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRAIF-------------KNPGAIKKIKEAKLCLVSYGE----LNNVPEVVYMQRFMGIE 325 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~~~v~~~~~~Gl~v~~wgt----vn~~~~~~~l~~~~GVd 325 (371)
...+.+++|.++|+.++.++..+.. -=+++++.+|++|+.++.|.. -+..++..+.+.++||+
T Consensus 310 ~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~ 389 (641)
T 3a24_A 310 TYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVK 389 (641)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCC
Confidence 4577899999999999887754310 016899999999999999931 12223222333579999
Q ss_pred EEEeCChH
Q 017440 326 GVIVDLVS 333 (371)
Q Consensus 326 gIiTD~p~ 333 (371)
||=+|+.+
T Consensus 390 gvK~Df~~ 397 (641)
T 3a24_A 390 GFKVDFMD 397 (641)
T ss_dssp EEEEECCC
T ss_pred EEEECCCC
Confidence 99999975
No 31
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.31 E-value=4.9 Score=36.33 Aligned_cols=107 Identities=14% Similarity=0.141 Sum_probs=54.3
Q ss_pred HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccC
Q 017440 231 DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELN 310 (371)
Q Consensus 231 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn 310 (371)
+.++.+|+..+++|+.++.+.. .+....+++.++.+...|++++..+.-..--..++++.++++|+....--+.+
T Consensus 84 ~~v~~ir~~~~~~Pivlm~Y~n-----pv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~ 158 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLLLYAN-----LVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPN 158 (267)
T ss_dssp HHHHHHHHHCTTCCEEEEECHH-----HHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTT
T ss_pred HHHHHHHhcCCCCCEEEEecCc-----HHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCC
Confidence 3455555554566766654311 00011356677788888999866542221124578899999999854331444
Q ss_pred Ch-HHHHHHHHh----------cCceEEEeCChHHHHHHHHhh
Q 017440 311 NV-PEVVYMQRF----------MGIEGVIVDLVSEITEAVSDF 342 (371)
Q Consensus 311 ~~-~~~~~l~~~----------~GVdgIiTD~p~~l~~~l~~~ 342 (371)
++ +.+..+... .|+.|..+..+..+.+.+++.
T Consensus 159 t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~v 201 (267)
T 3vnd_A 159 ADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQL 201 (267)
T ss_dssp CCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHH
Confidence 43 344443211 567777766665555555554
No 32
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=84.00 E-value=7.6 Score=34.31 Aligned_cols=116 Identities=20% Similarity=0.190 Sum_probs=73.1
Q ss_pred HHHHHHHHhcCCCCeEEecCC---HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc
Q 017440 209 AILKVVFEHAQGRPIMFSSFQ---PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA 285 (371)
Q Consensus 209 ~vl~~l~~~~~~~~v~i~Sf~---~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 285 (371)
.+.+.+.+-|.. -+-+..-+ .+.++.+++..|+.-++. ++ + -+ .+-.+.+...|+++++.+.
T Consensus 50 ~~a~al~~gGi~-~iEvt~~t~~a~e~I~~l~~~~~~~~iGa----GT-----V--lt-~~~a~~Ai~AGA~fIvsP~-- 114 (232)
T 4e38_A 50 PLGKVLAENGLP-AAEITFRSDAAVEAIRLLRQAQPEMLIGA----GT-----I--LN-GEQALAAKEAGATFVVSPG-- 114 (232)
T ss_dssp HHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTCEEEE----EC-----C--CS-HHHHHHHHHHTCSEEECSS--
T ss_pred HHHHHHHHCCCC-EEEEeCCCCCHHHHHHHHHHhCCCCEEeE----CC-----c--CC-HHHHHHHHHcCCCEEEeCC--
Confidence 344444454543 33443323 345666777666644432 11 0 12 2335667788999998664
Q ss_pred ccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHH---HHHHHhhhcc
Q 017440 286 IFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEI---TEAVSDFIKN 345 (371)
Q Consensus 286 ~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l---~~~l~~~~~~ 345 (371)
.+++.++.++++|+.++.= +.++.++.+.+ ++|+|.|-. +|... .++++....+
T Consensus 115 --~~~~vi~~~~~~gi~~ipG--v~TptEi~~A~-~~Gad~vK~-FPa~~~gG~~~lkal~~p 171 (232)
T 4e38_A 115 --FNPNTVRACQEIGIDIVPG--VNNPSTVEAAL-EMGLTTLKF-FPAEASGGISMVKSLVGP 171 (232)
T ss_dssp --CCHHHHHHHHHHTCEEECE--ECSHHHHHHHH-HTTCCEEEE-CSTTTTTHHHHHHHHHTT
T ss_pred --CCHHHHHHHHHcCCCEEcC--CCCHHHHHHHH-HcCCCEEEE-CcCccccCHHHHHHHHHH
Confidence 3899999999999999773 55788888885 799998887 88433 3566665443
No 33
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=83.60 E-value=22 Score=31.11 Aligned_cols=141 Identities=11% Similarity=0.087 Sum_probs=81.6
Q ss_pred HHHHHHhc--CCCceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcC
Q 017440 173 LQEAFEKV--DQSVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTN 250 (371)
Q Consensus 173 L~evL~~~--~~~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~ 250 (371)
++++++.+ ++++.+.+.-....+ .... ....++.....+.|... +.+ -+.+.++.+|+.. ++|+.-+..
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~p--l~~~---~~~~~~A~a~~~~Ga~~-i~~--~~~~~i~~ir~~v-~~Pvig~~k 77 (232)
T 3igs_A 7 LEQLDKNIAASGGLIVSCQPVPGSP--LDKP---EIVAAMALAAEQAGAVA-VRI--EGIDNLRMTRSLV-SVPIIGIIK 77 (232)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTCT--TCSH---HHHHHHHHHHHHTTCSE-EEE--ESHHHHHHHHTTC-CSCEEEECB
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCCC--CCCc---chHHHHHHHHHHCCCeE-EEE--CCHHHHHHHHHhc-CCCEEEEEe
Confidence 55666666 455555555443222 1111 22344555555655442 333 3578888888764 678642222
Q ss_pred CC---CcccCCCCcccHHHHHHHHHhCCCceEecccccc---cCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCc
Q 017440 251 GG---AQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI---FKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGI 324 (371)
Q Consensus 251 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GV 324 (371)
.. ...+-+ .++++ +..+...|++.|.+..... ....++++.+++.|+.+.+- +.+.+++.++. +.|+
T Consensus 78 ~d~~~~~~~I~---~~~~~-i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~--v~t~eea~~a~-~~Ga 150 (232)
T 3igs_A 78 RDLDESPVRIT---PFLDD-VDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMAD--CSSVDDGLACQ-RLGA 150 (232)
T ss_dssp CCCSSCCCCBS---CSHHH-HHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEE--CCSHHHHHHHH-HTTC
T ss_pred ecCCCcceEeC---ccHHH-HHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEe--CCCHHHHHHHH-hCCC
Confidence 11 001111 12333 4456778999887654321 11247899999999998874 77888888875 7999
Q ss_pred eEEEe
Q 017440 325 EGVIV 329 (371)
Q Consensus 325 dgIiT 329 (371)
|.|.+
T Consensus 151 d~Ig~ 155 (232)
T 3igs_A 151 DIIGT 155 (232)
T ss_dssp SEEEC
T ss_pred CEEEE
Confidence 99964
No 34
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=83.36 E-value=6.2 Score=33.81 Aligned_cols=54 Identities=13% Similarity=0.087 Sum_probs=40.4
Q ss_pred CChHHHHHHHHhCCeEEEe-----cccCChHHHHHHHHhcCceEEEeCChHHHHHHHHh
Q 017440 288 KNPGAIKKIKEAKLCLVSY-----GELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSD 341 (371)
Q Consensus 288 ~~~~~v~~~~~~Gl~v~~w-----gtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~ 341 (371)
.-++.++.+|++|..++++ |--+|...+.++....++|||||=++..+..+.+.
T Consensus 42 ~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~ 100 (192)
T 3kts_A 42 QLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQH 100 (192)
T ss_dssp THHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHC
Confidence 3478999999999999887 21235555556543369999999999998877654
No 35
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=83.11 E-value=11 Score=32.13 Aligned_cols=138 Identities=10% Similarity=0.082 Sum_probs=87.8
Q ss_pred CccCHHHHHHhcC-CCc--eEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHC-CCCC
Q 017440 169 PLCTLQEAFEKVD-QSV--GFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQ-STYP 244 (371)
Q Consensus 169 ~iptL~evL~~~~-~~~--~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~-p~~~ 244 (371)
.+..|+++.+.++ .+. .+++|+=.. -... +. -++.++..+.. .+.|-....+...++.. ..++
T Consensus 41 ~I~~L~~iv~~ik~~gK~vivh~DlI~G--Ls~d-----~~---ai~fL~~~~pd---GIIsTk~~~i~~Akk~GL~tIq 107 (188)
T 1vkf_A 41 DILNLKFHLKILKDRGKTVFVDMDFVNG--LGEG-----EE---AILFVKKAGAD---GIITIKPKNYVVAKKNGIPAVL 107 (188)
T ss_dssp ETTTHHHHHHHHHHTTCEEEEEGGGEET--CCSS-----HH---HHHHHHHHTCS---EEEESCHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCcccc--cCCC-----HH---HHHHHHhcCCC---EEEcCcHHHHHHHHHcCCEEee
Confidence 4677999999986 344 444443321 1101 11 12223344333 45566777887777652 3356
Q ss_pred eEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCc
Q 017440 245 VFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGI 324 (371)
Q Consensus 245 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GV 324 (371)
++|+.++ .++...++.....+.+.+-.-.. .+-|++++.+ .+.++.+=|-++++++... + +.|+
T Consensus 108 R~FliDs----------~al~~~~~~I~~~kPD~iEiLPg--~v~p~~I~~v--~~~PiIaGGlI~t~edv~~-l-~aGA 171 (188)
T 1vkf_A 108 RFFALDS----------KAVERGIEQIETLGVDVVEVLPG--AVAPKVARKI--PGRTVIAAGLVETEEEARE-I-LKHV 171 (188)
T ss_dssp EEECCSH----------HHHHHHHHHHHHHTCSEEEEESG--GGHHHHHTTS--TTSEEEEESCCCSHHHHHH-H-TTTS
T ss_pred EEEEEEe----------HHHhhhhhhccccCCCeEeecCC--CchHHHHHHh--cCCCEEEECCcCCHHHHHH-H-HCCC
Confidence 6776653 24666677777777766432211 1257888888 7889999999999999988 6 6999
Q ss_pred eEEEeCChHHH
Q 017440 325 EGVIVDLVSEI 335 (371)
Q Consensus 325 dgIiTD~p~~l 335 (371)
++|.|-.++..
T Consensus 172 ~aIsTs~~~LW 182 (188)
T 1vkf_A 172 SAISTSSRILW 182 (188)
T ss_dssp SEEEECCHHHH
T ss_pred eEEEeCCHHHh
Confidence 99999988753
No 36
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=79.75 E-value=34 Score=30.73 Aligned_cols=142 Identities=12% Similarity=0.050 Sum_probs=78.6
Q ss_pred cCHHHHHHhcCCCceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEec----C--CHHHHHHHHHHCCCCC
Q 017440 171 CTLQEAFEKVDQSVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSS----F--QPDAALLIRKLQSTYP 244 (371)
Q Consensus 171 ptL~evL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~S----f--~~~~l~~l~~~~p~~~ 244 (371)
..|.++|. .++..+.-|+|..++.... .....-...+.....+.|.. -+-+.. | +.+.++.+++. -++|
T Consensus 41 ~~f~~al~--~~~~~~IaE~K~asPs~g~-i~~~~~p~~~A~~y~~~GA~-~isvltd~~~f~Gs~~~l~~ir~~-v~lP 115 (272)
T 3qja_A 41 LDVMAALR--EPGIGVIAEVKRASPSAGA-LATIADPAKLAQAYQDGGAR-IVSVVTEQRRFQGSLDDLDAVRAS-VSIP 115 (272)
T ss_dssp CCHHHHHT--SSSCEEEEEEC--------------CHHHHHHHHHHTTCS-EEEEECCGGGHHHHHHHHHHHHHH-CSSC
T ss_pred CCHHHHHh--cCCCeEEEEEecCCCCCCc-cCCCCCHHHHHHHHHHcCCC-EEEEecChhhcCCCHHHHHHHHHh-CCCC
Confidence 35777775 2468999999976543110 00000122344444444433 222221 1 35677777775 3677
Q ss_pred eEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccccc--CChHHHHHHHHhCCeEEEecccCChHHHHHHHHhc
Q 017440 245 VFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIF--KNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFM 322 (371)
Q Consensus 245 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~ 322 (371)
+..- + +-.. ..-+..+...|+++|++....+- .-.++++.+++.|+.+.+- +.+.+++.+.. +.
T Consensus 116 vl~k--d-------fiid--~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lve--v~t~ee~~~A~-~~ 181 (272)
T 3qja_A 116 VLRK--D-------FVVQ--PYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVE--VHTEQEADRAL-KA 181 (272)
T ss_dssp EEEE--S-------CCCS--HHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHH-HH
T ss_pred EEEC--c-------cccC--HHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEE--cCCHHHHHHHH-HC
Confidence 7532 1 1001 11256778899999987433210 0135678889999998764 67788887775 68
Q ss_pred CceEEEeCC
Q 017440 323 GIEGVIVDL 331 (371)
Q Consensus 323 GVdgIiTD~ 331 (371)
|+|.|-++.
T Consensus 182 Gad~IGv~~ 190 (272)
T 3qja_A 182 GAKVIGVNA 190 (272)
T ss_dssp TCSEEEEES
T ss_pred CCCEEEECC
Confidence 999987763
No 37
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=78.21 E-value=7.3 Score=33.72 Aligned_cols=92 Identities=14% Similarity=0.020 Sum_probs=58.4
Q ss_pred cCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccC-ChHHHHHHHHhCCeEEE
Q 017440 227 SFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEAKLCLVS 305 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~Gl~v~~ 305 (371)
++-++.++.+|+..++.++.+...- .+ .....++.+...|++++..+...... -.+.++.++++|+.+.+
T Consensus 44 ~~G~~~i~~lr~~~~~~~i~ld~~l-----~d----~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~ 114 (218)
T 3jr2_A 44 AEGMKAVSTLRHNHPNHILVCDMKT-----TD----GGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQI 114 (218)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEE-----CS----CHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred hcCHHHHHHHHHhCCCCcEEEEEee-----cc----cHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccce
Confidence 4567889999998787777653311 11 11234466677899999877543100 13567778999998874
Q ss_pred --ecccCChHHHHHHHHhcCceEEEe
Q 017440 306 --YGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 306 --wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
- .+.+++++.++. +.|+|.+.+
T Consensus 115 d~l-~~~T~~~~~~~~-~~g~d~v~~ 138 (218)
T 3jr2_A 115 EIY-GNWTMQDAKAWV-DLGITQAIY 138 (218)
T ss_dssp ECC-SSCCHHHHHHHH-HTTCCEEEE
T ss_pred eee-ecCCHHHHHHHH-HcCccceee
Confidence 3 244566666664 579998754
No 38
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=77.52 E-value=14 Score=32.21 Aligned_cols=96 Identities=20% Similarity=0.225 Sum_probs=63.4
Q ss_pred HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccC
Q 017440 231 DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELN 310 (371)
Q Consensus 231 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn 310 (371)
+.++.+++..|++-++.=+ . - ..+-.+.+...|+++++... .+++.++.+++.|..+.. | +.
T Consensus 57 ~~i~~l~~~~~~l~vgaGt--v---------l-~~d~~~~A~~aGAd~v~~p~----~d~~v~~~ar~~g~~~i~-G-v~ 118 (224)
T 1vhc_A 57 DAIRLLRANRPDFLIAAGT--V---------L-TAEQVVLAKSSGADFVVTPG----LNPKIVKLCQDLNFPITP-G-VN 118 (224)
T ss_dssp HHHHHHHHHCTTCEEEEES--C---------C-SHHHHHHHHHHTCSEEECSS----CCHHHHHHHHHTTCCEEC-E-EC
T ss_pred HHHHHHHHhCcCcEEeeCc--E---------e-eHHHHHHHHHCCCCEEEECC----CCHHHHHHHHHhCCCEEe-c-cC
Confidence 4455566776654443311 0 0 12345677888999998763 278889999999988766 3 56
Q ss_pred ChHHHHHHHHhcCceEEEeCChHH-H--HHHHHhhhccc
Q 017440 311 NVPEVVYMQRFMGIEGVIVDLVSE-I--TEAVSDFIKNE 346 (371)
Q Consensus 311 ~~~~~~~l~~~~GVdgIiTD~p~~-l--~~~l~~~~~~~ 346 (371)
++.++.+.. +.|+|.|.- +|.. + .++++....+-
T Consensus 119 t~~e~~~A~-~~Gad~vk~-Fpa~~~gG~~~lk~l~~~~ 155 (224)
T 1vhc_A 119 NPMAIEIAL-EMGISAVKF-FPAEASGGVKMIKALLGPY 155 (224)
T ss_dssp SHHHHHHHH-HTTCCEEEE-TTTTTTTHHHHHHHHHTTT
T ss_pred CHHHHHHHH-HCCCCEEEE-eeCccccCHHHHHHHHhhC
Confidence 688887775 799999988 8832 2 45565554443
No 39
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=75.96 E-value=15 Score=33.37 Aligned_cols=73 Identities=16% Similarity=0.107 Sum_probs=51.8
Q ss_pred HHHHhCCCceEecccccccCChHHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEeCC-------hHHHHHH
Q 017440 269 KVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL-------VSEITEA 338 (371)
Q Consensus 269 ~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~-------p~~l~~~ 338 (371)
..+...|...|.++......+.++++.+++. ++.+.+=|-+.+.+++++++ ..|+|+|++.. |+.+.++
T Consensus 193 ~~gad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll-~aGAD~VVVGSAav~d~~Pelv~e~ 271 (286)
T 3vk5_A 193 HVARAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYL-DSGADYVGFAGALEQPDWRSALAEI 271 (286)
T ss_dssp HHHHHTTCSEEEEECSSSCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHH-HTTCSEEEESGGGSSTTHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEECchhhcCCCHHHHHHH
Confidence 3345667777776654444577899999886 47777666799999999886 69999998754 5666666
Q ss_pred HHhh
Q 017440 339 VSDF 342 (371)
Q Consensus 339 l~~~ 342 (371)
.++.
T Consensus 272 a~~~ 275 (286)
T 3vk5_A 272 AGRR 275 (286)
T ss_dssp HC--
T ss_pred HHhC
Confidence 6444
No 40
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=75.90 E-value=11 Score=32.20 Aligned_cols=80 Identities=5% Similarity=0.008 Sum_probs=52.1
Q ss_pred cHHHHHHHHHhCCCceEeccc---c-cccCC--hHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEe-----C
Q 017440 263 SLDEAIKVCLAGGLQGIVSEV---R-AIFKN--PGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIV-----D 330 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~---~-~~~~~--~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT-----D 330 (371)
.+.+.++.+.+.|++.++... . ....+ ++.++.+++. +..+.+...+|+++...+.+.+.|+|+|+. +
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~~ 96 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTR 96 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGCS
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCccc
Confidence 567777888888887755442 1 01112 7889999887 666665545677653224445799999976 6
Q ss_pred ChHHHHHHHHhh
Q 017440 331 LVSEITEAVSDF 342 (371)
Q Consensus 331 ~p~~l~~~l~~~ 342 (371)
.+..+.+.+++.
T Consensus 97 ~~~~~~~~~~~~ 108 (220)
T 2fli_A 97 HIHGALQKIKAA 108 (220)
T ss_dssp CHHHHHHHHHHT
T ss_pred cHHHHHHHHHHc
Confidence 676666666653
No 41
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=75.74 E-value=14 Score=32.15 Aligned_cols=117 Identities=19% Similarity=0.159 Sum_probs=73.3
Q ss_pred HHHHHHHHHhcCCCCeEEecCC---HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccc
Q 017440 208 EAILKVVFEHAQGRPIMFSSFQ---PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVR 284 (371)
Q Consensus 208 ~~vl~~l~~~~~~~~v~i~Sf~---~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 284 (371)
..+.+.+.+-|.. -+-+..-. .+.++.+++..|+.-++. ++- -+.+ -.+.+...|++.++.+.
T Consensus 28 ~~~a~al~~gGi~-~iEvt~~t~~a~~~I~~l~~~~p~~~IGA----GTV-------lt~~-~a~~ai~AGA~fivsP~- 93 (217)
T 3lab_A 28 IPMAKALVAGGVH-LLEVTLRTEAGLAAISAIKKAVPEAIVGA----GTV-------CTAD-DFQKAIDAGAQFIVSPG- 93 (217)
T ss_dssp HHHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTSEEEE----ECC-------CSHH-HHHHHHHHTCSEEEESS-
T ss_pred HHHHHHHHHcCCC-EEEEeCCCccHHHHHHHHHHHCCCCeEee----ccc-------cCHH-HHHHHHHcCCCEEEeCC-
Confidence 3444445555543 33343322 356666677777644433 110 1223 34556778998887653
Q ss_pred cccCChHHHHHHHHhCC------eEEEecccCChHHHHHHHHhcCceEEEeCChHHH---HHHHHhhhcc
Q 017440 285 AIFKNPGAIKKIKEAKL------CLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEI---TEAVSDFIKN 345 (371)
Q Consensus 285 ~~~~~~~~v~~~~~~Gl------~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l---~~~l~~~~~~ 345 (371)
.++++++.++++|+ .++.= +.++.|+.+.+ ++|+|.|-. +|... .++++....+
T Consensus 94 ---~~~evi~~~~~~~v~~~~~~~~~PG--~~TptE~~~A~-~~Gad~vK~-FPa~~~gG~~~lkal~~p 156 (217)
T 3lab_A 94 ---LTPELIEKAKQVKLDGQWQGVFLPG--VATASEVMIAA-QAGITQLKC-FPASAIGGAKLLKAWSGP 156 (217)
T ss_dssp ---CCHHHHHHHHHHHHHCSCCCEEEEE--ECSHHHHHHHH-HTTCCEEEE-TTTTTTTHHHHHHHHHTT
T ss_pred ---CcHHHHHHHHHcCCCccCCCeEeCC--CCCHHHHHHHH-HcCCCEEEE-CccccccCHHHHHHHHhh
Confidence 38999999999999 88873 67888888875 799998866 67543 3666665443
No 42
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=75.71 E-value=4.5 Score=36.27 Aligned_cols=80 Identities=14% Similarity=0.220 Sum_probs=48.4
Q ss_pred cHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCC-hHHHHHHHHh----------cCceEEEeCC
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNN-VPEVVYMQRF----------MGIEGVIVDL 331 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~-~~~~~~l~~~----------~GVdgIiTD~ 331 (371)
.+++..+.|+..|++|+.+..--.--..++.+.++++|+......+.++ .+.++.+... .||.|.-+..
T Consensus 104 G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~ 183 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVE 183 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHH
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCC
Confidence 4677788899999998875532111246788899999998644324554 3445444311 3566655555
Q ss_pred hHHHHHHHHhh
Q 017440 332 VSEITEAVSDF 342 (371)
Q Consensus 332 p~~l~~~l~~~ 342 (371)
+..+.+++++.
T Consensus 184 ~~~~~~~v~~v 194 (252)
T 3tha_A 184 EAILQDKVKEI 194 (252)
T ss_dssp HHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 55555555544
No 43
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=75.37 E-value=28 Score=34.32 Aligned_cols=104 Identities=9% Similarity=0.132 Sum_probs=65.1
Q ss_pred HHhcCCCCeEEecCCH------HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc---
Q 017440 215 FEHAQGRPIMFSSFQP------DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA--- 285 (371)
Q Consensus 215 ~~~~~~~~v~i~Sf~~------~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--- 285 (371)
.+.+ .+.+.+.+-+. +.++++++..|+.++..-.- .+.+. .+.+...|++++.+....
T Consensus 265 veaG-vd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v-----------~t~e~-a~~~~~aGad~i~vg~g~gsi 331 (511)
T 3usb_A 265 VKAS-VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV-----------ATAEA-TKALIEAGANVVKVGIGPGSI 331 (511)
T ss_dssp HHTT-CSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE-----------CSHHH-HHHHHHHTCSEEEECSSCSTT
T ss_pred Hhhc-cceEEecccccchhhhhhHHHHHHHhCCCceEEeeee-----------ccHHH-HHHHHHhCCCEEEECCCCccc
Confidence 3444 33566666554 67888888888777653211 12333 344567788888642110
Q ss_pred --------c-cCCh----HHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCCh
Q 017440 286 --------I-FKNP----GAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 286 --------~-~~~~----~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p 332 (371)
. ..+- +..+.+++.+++|++=|-+.+..++.+++ .+|+|+|+.-.+
T Consensus 332 ~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a~GA~~V~vGs~ 390 (511)
T 3usb_A 332 CTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKAL-AAGAHVVMLGSM 390 (511)
T ss_dssp CCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred cccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHH-HhCchhheecHH
Confidence 0 0011 22333455689999877798999998886 799999998765
No 44
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=71.59 E-value=37 Score=29.55 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=52.6
Q ss_pred HHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHH-H--HHHHHhh
Q 017440 266 EAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSE-I--TEAVSDF 342 (371)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~-l--~~~l~~~ 342 (371)
+-.+.+...|+++++... .+++.++..++.|..+.. | +.++.++.+.. +.|+|.|-. ||.. + .++++..
T Consensus 89 d~~~~A~~aGAd~v~~p~----~d~~v~~~~~~~g~~~i~-G-~~t~~e~~~A~-~~Gad~vk~-FPa~~~~G~~~lk~i 160 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTPG----ITEDILEAGVDSEIPLLP-G-ISTPSEIMMGY-ALGYRRFKL-FPAEISGGVAAIKAF 160 (225)
T ss_dssp HHHHHHHHHTCSSEECSS----CCHHHHHHHHHCSSCEEC-E-ECSHHHHHHHH-TTTCCEEEE-TTHHHHTHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEeCC----CCHHHHHHHHHhCCCEEE-e-eCCHHHHHHHH-HCCCCEEEE-ccCccccCHHHHHHH
Confidence 345677888999998763 378899999999987765 3 55677887775 799999988 9843 2 3556555
Q ss_pred hcc
Q 017440 343 IKN 345 (371)
Q Consensus 343 ~~~ 345 (371)
..+
T Consensus 161 ~~~ 163 (225)
T 1mxs_A 161 GGP 163 (225)
T ss_dssp HTT
T ss_pred Hhh
Confidence 444
No 45
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=70.59 E-value=12 Score=31.80 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=40.8
Q ss_pred ChHHHHHHHHhCCeEEEe-----cccCChHHHHHHHHhcCceEEEeCChHHHHHHHHh
Q 017440 289 NPGAIKKIKEAKLCLVSY-----GELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSD 341 (371)
Q Consensus 289 ~~~~v~~~~~~Gl~v~~w-----gtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~ 341 (371)
-++.++.+|++|+.|+++ |--.|.....++ ...++|||+|=.+..+..+.+.
T Consensus 45 L~~iv~~ik~~gK~vivh~DlI~GLs~d~~ai~fL-~~~~pdGIIsTk~~~i~~Akk~ 101 (188)
T 1vkf_A 45 LKFHLKILKDRGKTVFVDMDFVNGLGEGEEAILFV-KKAGADGIITIKPKNYVVAKKN 101 (188)
T ss_dssp HHHHHHHHHHTTCEEEEEGGGEETCCSSHHHHHHH-HHHTCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCeEEEecCcccccCCCHHHHHHH-HhcCCCEEEcCcHHHHHHHHHc
Confidence 468999999999999988 212355556666 6789999999999999887654
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=69.94 E-value=16 Score=34.41 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=49.0
Q ss_pred HHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.+.++.+...+++.|.++... ..++.++.+++.|+.|++ .+.+.++...+. +.|+|+|+.+-
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~--~~~~~i~~~~~~g~~v~~--~v~t~~~a~~a~-~~GaD~i~v~g 173 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGV--PDREVIARLRRAGTLTLV--TATTPEEARAVE-AAGADAVIAQG 173 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSC--CCHHHHHHHHHTTCEEEE--EESSHHHHHHHH-HTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCCC--CcHHHHHHHHHCCCeEEE--ECCCHHHHHHHH-HcCCCEEEEeC
Confidence 5667788888999988876543 257899999999998765 467788877764 79999998854
No 47
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=69.25 E-value=21 Score=30.20 Aligned_cols=90 Identities=14% Similarity=0.044 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccc-cCChHHHHHHHHhCCeEEEe
Q 017440 228 FQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI-FKNPGAIKKIKEAKLCLVSY 306 (371)
Q Consensus 228 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~~~~Gl~v~~w 306 (371)
+-++.++.+++..|+.|+..-.... |. ....++.+...|+++++++.... ..-.+.++.+++.|..+.+-
T Consensus 39 ~g~~~i~~l~~~~~~~~i~~~l~~~-----di----~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~ 109 (207)
T 3ajx_A 39 EGLSVITAVKKAHPDKIVFADMKTM-----DA----GELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVD 109 (207)
T ss_dssp HCTHHHHHHHHHSTTSEEEEEEEEC-----SC----HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred hCHHHHHHHHHhCCCCeEEEEEEec-----Cc----cHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEE
Confidence 4456788888887777765422110 10 22335667789999987554321 01134667888889987553
Q ss_pred c-ccCChHH-HHHHHHhcCceEE
Q 017440 307 G-ELNNVPE-VVYMQRFMGIEGV 327 (371)
Q Consensus 307 g-tvn~~~~-~~~l~~~~GVdgI 327 (371)
. +.+++.+ +..+ ...|+|.|
T Consensus 110 ~~s~~~p~~~~~~~-~~~g~d~v 131 (207)
T 3ajx_A 110 LIGIEDKATRAQEV-RALGAKFV 131 (207)
T ss_dssp CTTCSSHHHHHHHH-HHTTCSEE
T ss_pred EecCCChHHHHHHH-HHhCCCEE
Confidence 0 2335555 4444 36799988
No 48
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=69.16 E-value=41 Score=31.12 Aligned_cols=135 Identities=13% Similarity=0.312 Sum_probs=77.1
Q ss_pred ccCHHHHHHhcC-CCce-EEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCCH-----------HHHHHH
Q 017440 170 LCTLQEAFEKVD-QSVG-FNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQP-----------DAALLI 236 (371)
Q Consensus 170 iptL~evL~~~~-~~~~-l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~-----------~~l~~l 236 (371)
+.++.|+|+.+. ++.. --+.+= +. ..++++++.-++. ..+++++.... ..+...
T Consensus 3 lv~~~~ll~~A~~~~yAV~AfNv~--n~---------e~~~Ail~AAee~--~sPvIlq~s~g~~~y~g~~~~~~~v~~a 69 (323)
T 2isw_A 3 LCTLRQMLGEARKHKYGVGAFNVN--NM---------EQIQGIMKAVVQL--KSPVILQCSRGALKYSDMIYLKKLCEAA 69 (323)
T ss_dssp BCCHHHHHHHHHHTTCCEEEEECC--SH---------HHHHHHHHHHHHT--TCCEEEEEEHHHHHHTTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCceEEEEeeC--CH---------HHHHHHHHHHHHh--CCCEEEECChhHHHhCCHHHHHHHHHHH
Confidence 456788888875 2211 111111 11 4566777666655 45677775332 122333
Q ss_pred HHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc------ccCChHHHHHHHHhCCeEE----Ee
Q 017440 237 RKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA------IFKNPGAIKKIKEAKLCLV----SY 306 (371)
Q Consensus 237 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~v~~~~~~Gl~v~----~w 306 (371)
.+..+.+|+.+=.+-+. ++ +.+..|...|++++..+.+. ...|.++++.+|+.|+.|= ..
T Consensus 70 a~~~~~VPValHlDHg~---------~~-e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~v 139 (323)
T 2isw_A 70 LEKHPDIPICIHLDHGD---------TL-ESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTL 139 (323)
T ss_dssp HHHCTTSCEEEEEEEEC---------SH-HHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred HHhcCCCcEEEECCCCC---------CH-HHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCc
Confidence 34447789887554321 22 33556777899888877543 2357789999999998772 22
Q ss_pred cc----------cCChHHHHHHHHhcCceEE
Q 017440 307 GE----------LNNVPEVVYMQRFMGIEGV 327 (371)
Q Consensus 307 gt----------vn~~~~~~~l~~~~GVdgI 327 (371)
|- .-++++..++..+.|||.+
T Consensus 140 gg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~L 170 (323)
T 2isw_A 140 GGIEEDVQNTVQLTEPQDAKKFVELTGVDAL 170 (323)
T ss_dssp ----------CCCCCHHHHHHHHHHHCCSEE
T ss_pred cCCccCcccccccCCHHHHHHHHHHHCCCEE
Confidence 21 1246666666656777655
No 49
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=68.97 E-value=14 Score=34.02 Aligned_cols=63 Identities=11% Similarity=0.191 Sum_probs=49.5
Q ss_pred cHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.+.+.++.+...|+++|.++... ..++++.+++.|++++. .+.+.++...+. +.|+|+|+.+-
T Consensus 84 ~~~~~~~~~~~~g~d~V~~~~g~---p~~~~~~l~~~gi~vi~--~v~t~~~a~~~~-~~GaD~i~v~g 146 (328)
T 2gjl_A 84 PYAEYRAAIIEAGIRVVETAGND---PGEHIAEFRRHGVKVIH--KCTAVRHALKAE-RLGVDAVSIDG 146 (328)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESC---CHHHHHHHHHTTCEEEE--EESSHHHHHHHH-HTTCSEEEEEC
T ss_pred cHHHHHHHHHhcCCCEEEEcCCC---cHHHHHHHHHcCCCEEe--eCCCHHHHHHHH-HcCCCEEEEEC
Confidence 35667788888999998877543 47899999999998874 467777777765 79999999854
No 50
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=68.87 E-value=67 Score=29.73 Aligned_cols=111 Identities=11% Similarity=-0.012 Sum_probs=68.0
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccc---------cCChHHHHHHHHh-
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI---------FKNPGAIKKIKEA- 299 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~v~~~~~~- 299 (371)
.++++.+++.. ++|+++-+................+..+.+...|++.+++..... ...-++++.++++
T Consensus 198 ~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~ 276 (340)
T 3gr7_A 198 GEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA 276 (340)
T ss_dssp HHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc
Confidence 35667777766 777776554321000001112345556666778999888752110 1123567777765
Q ss_pred CCeEEEecccCChHHHHHHHHhcC-ceEEEeCC-----hHHHHHHHHhh
Q 017440 300 KLCLVSYGELNNVPEVVYMQRFMG-IEGVIVDL-----VSEITEAVSDF 342 (371)
Q Consensus 300 Gl~v~~wgtvn~~~~~~~l~~~~G-VdgIiTD~-----p~~l~~~l~~~ 342 (371)
++.|.+=|-+++.+++.+++ +.| +|+|.--+ |+...++.+.+
T Consensus 277 ~iPVi~~GgI~s~e~a~~~L-~~G~aD~V~iGR~~lanPdl~~ki~~~l 324 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEIL-QNGRADLVFLGRELLRNPYWPYAAAREL 324 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHH-HTTSCSEEEECHHHHHCTTHHHHHHHHT
T ss_pred CCcEEeeCCCCCHHHHHHHH-HCCCeeEEEecHHHHhCchHHHHHHHHC
Confidence 68888777788999999987 577 99998754 55555655554
No 51
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=68.50 E-value=36 Score=31.33 Aligned_cols=63 Identities=13% Similarity=0.286 Sum_probs=49.1
Q ss_pred cHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.+.+.++.+...|+++|.++... ..++++.+++.|+++.+ .+.+.+++..+. +.|+|+|+.+-
T Consensus 76 ~~~~~~~~a~~~g~d~V~~~~g~---p~~~i~~l~~~g~~v~~--~v~~~~~a~~~~-~~GaD~i~v~g 138 (332)
T 2z6i_A 76 FVEDIVDLVIEEGVKVVTTGAGN---PSKYMERFHEAGIIVIP--VVPSVALAKRME-KIGADAVIAEG 138 (332)
T ss_dssp THHHHHHHHHHTTCSEEEECSSC---GGGTHHHHHHTTCEEEE--EESSHHHHHHHH-HTTCSCEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEECCCC---hHHHHHHHHHcCCeEEE--EeCCHHHHHHHH-HcCCCEEEEEC
Confidence 35667788888999999877643 46789999999998875 467777777764 79999998863
No 52
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=67.12 E-value=27 Score=29.42 Aligned_cols=105 Identities=14% Similarity=0.033 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhcCCCCeEE--ecCC-HHHHHHHHHHCC-CCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecc
Q 017440 207 LEAILKVVFEHAQGRPIMF--SSFQ-PDAALLIRKLQS-TYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSE 282 (371)
Q Consensus 207 ~~~vl~~l~~~~~~~~v~i--~Sf~-~~~l~~l~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 282 (371)
...+++.+.+.+.. -+-+ .+.+ .+.++.+|+..| +..++.-.- .+..+ .+.+...|++++ ..
T Consensus 24 ~~~~~~~~~~~G~~-~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v-----------~~~~~-~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 24 AKEKALAVFEGGVH-LIEITFTVPDADTVIKELSFLKEKGAIIGAGTV-----------TSVEQ-CRKAVESGAEFI-VS 89 (205)
T ss_dssp HHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHTHHHHHTTCEEEEESC-----------CSHHH-HHHHHHHTCSEE-EC
T ss_pred HHHHHHHHHHCCCC-EEEEeCCChhHHHHHHHHHHHCCCCcEEEeccc-----------CCHHH-HHHHHHcCCCEE-Ec
Confidence 34455556665533 1222 1212 345777777655 444443110 12333 355666889888 33
Q ss_pred cccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 283 VRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 283 ~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.. ..+++++.+++.|+.+.+ + +.+..++.+.. ++|+|.|-...
T Consensus 90 ~~---~~~~~~~~~~~~g~~vi~-g-~~t~~e~~~a~-~~Gad~vk~~~ 132 (205)
T 1wa3_A 90 PH---LDEEISQFCKEKGVFYMP-G-VMTPTELVKAM-KLGHTILKLFP 132 (205)
T ss_dssp SS---CCHHHHHHHHHHTCEEEC-E-ECSHHHHHHHH-HTTCCEEEETT
T ss_pred CC---CCHHHHHHHHHcCCcEEC-C-cCCHHHHHHHH-HcCCCEEEEcC
Confidence 22 268899999999999987 3 45677777775 79999887764
No 53
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=67.10 E-value=62 Score=30.90 Aligned_cols=103 Identities=12% Similarity=0.124 Sum_probs=61.1
Q ss_pred CCCeEEecCC--HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHH
Q 017440 220 GRPIMFSSFQ--PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIK 297 (371)
Q Consensus 220 ~~~v~i~Sf~--~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 297 (371)
..++++.+-+ ...++.+++..|++...+-+... .....++.....|+ ++.+ .+..-+..+.
T Consensus 37 ~tP~~v~dl~~l~~n~~~~~~~~~~~~i~yavKAn----------~~~~v~~~l~~~G~-g~dv------aS~~E~~~~~ 99 (424)
T 7odc_A 37 KDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCN----------DSRAIVSTLAAIGT-GFDC------ASKTEIQLVQ 99 (424)
T ss_dssp CCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHHTC-EEEE------CSHHHHHHHH
T ss_pred CCcEEEeeHHHHHHHHHHHHHhCCCCeEEEEeccC----------CcHHHHHHHHHcCC-cEEE------CCHHHHHHHH
Confidence 3456665433 23456666777766555555432 22344555555665 4432 2556677778
Q ss_pred HhCCe---EEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 298 EAKLC---LVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 298 ~~Gl~---v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
++|+. +...|...+.+++..++ +.|+..+..|..+++.++.+
T Consensus 100 ~~G~~~~~Ii~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 144 (424)
T 7odc_A 100 GLGVPAERVIYANPCKQVSQIKYAA-SNGVQMMTFDSEIELMKVAR 144 (424)
T ss_dssp HTTCCGGGEEECCSSCCHHHHHHHH-HTTCCEEEECSHHHHHHHHH
T ss_pred HcCCChhhEEECCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHHH
Confidence 88863 44333345666777765 68888778888888876644
No 54
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=66.99 E-value=16 Score=33.81 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=48.8
Q ss_pred HHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.+.++.+...+++.|.++... .+++++.+++.|++|++ .+.+.+++..+. +.|+|+|+.+.
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~---p~~~~~~l~~~g~~v~~--~v~s~~~a~~a~-~~GaD~i~v~g 152 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGN---PTKYIRELKENGTKVIP--VVASDSLARMVE-RAGADAVIAEG 152 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSC---CHHHHHHHHHTTCEEEE--EESSHHHHHHHH-HTTCSCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEECCCC---cHHHHHHHHHcCCcEEE--EcCCHHHHHHHH-HcCCCEEEEEC
Confidence 4566777778899988876543 57899999999998876 467778877775 79999999865
No 55
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=66.20 E-value=60 Score=29.75 Aligned_cols=111 Identities=15% Similarity=0.234 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHhcCCCCeEEecCCH-------H----HHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHh
Q 017440 205 HALEAILKVVFEHAQGRPIMFSSFQP-------D----AALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLA 273 (371)
Q Consensus 205 ~~~~~vl~~l~~~~~~~~v~i~Sf~~-------~----~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (371)
..++.+++.-++.+ .+++++.... . .+....+..+.+|+.+=.+-+. ++ +.+..|..
T Consensus 28 e~~~avi~AAee~~--sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~---------~~-e~~~~ai~ 95 (307)
T 3n9r_A 28 EMLNAIFEAGNEEN--SPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGT---------TF-ESCEKAVK 95 (307)
T ss_dssp HHHHHHHHHHHHHT--CCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEEC---------SH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCC---------CH-HHHHHHHH
Confidence 45667776666653 5677774321 1 1222333347789887554321 23 33455667
Q ss_pred CCCceEeccccc------ccCChHHHHHHHHhCCeEEEe-ccc----------------CChHHHHHHHHhcCceEE
Q 017440 274 GGLQGIVSEVRA------IFKNPGAIKKIKEAKLCLVSY-GEL----------------NNVPEVVYMQRFMGIEGV 327 (371)
Q Consensus 274 ~~~~~v~~~~~~------~~~~~~~v~~~~~~Gl~v~~w-gtv----------------n~~~~~~~l~~~~GVdgI 327 (371)
.|++++..+.+. +..|.++++.+|+.|+.|=+= |.+ -++++..++..+.|||.+
T Consensus 96 ~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~L 172 (307)
T 3n9r_A 96 AGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYL 172 (307)
T ss_dssp HTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEE
T ss_pred hCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEE
Confidence 799888877543 235778999999999877431 111 256777777656787766
No 56
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=66.01 E-value=44 Score=25.84 Aligned_cols=81 Identities=11% Similarity=0.147 Sum_probs=46.4
Q ss_pred HHHHHHHHHhCCCceEecccccccC-ChHHHHHHHHhC--CeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEAK--LCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEITE 337 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~G--l~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l~~ 337 (371)
..++++.+.....+.+.++....-. .-++++.+++.+ ..+.+. +- .+.+...+++ ..|+++++.- .++.+.+
T Consensus 55 ~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~Kp~~~~~l~~ 132 (150)
T 4e7p_A 55 GQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVV-TTFKRAGYFERAV-KAGVDAYVLKERSIADLMQ 132 (150)
T ss_dssp HHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEE-ESCCCHHHHHHHH-HTTCSEEEETTSCHHHHHH
T ss_pred HHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE-eCCCCHHHHHHHH-HCCCcEEEecCCCHHHHHH
Confidence 3444555544455555544432111 235677777754 667777 44 3444555554 6999998875 4566666
Q ss_pred HHHhhhccc
Q 017440 338 AVSDFIKNE 346 (371)
Q Consensus 338 ~l~~~~~~~ 346 (371)
.++...+..
T Consensus 133 ~i~~~~~~~ 141 (150)
T 4e7p_A 133 TLHTVLEGR 141 (150)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 666665543
No 57
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=65.66 E-value=62 Score=28.82 Aligned_cols=126 Identities=15% Similarity=0.107 Sum_probs=75.2
Q ss_pred cCCCCeEEec--------CCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcc-----cHHHHHHHHHhCCCceEecccc
Q 017440 218 AQGRPIMFSS--------FQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRS-----SLDEAIKVCLAGGLQGIVSEVR 284 (371)
Q Consensus 218 ~~~~~v~i~S--------f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~ 284 (371)
+..+|+-++| .+...++.+++.. ++|+..++.+.. .|+-+. -+.+-+..++..|++|++...-
T Consensus 20 ~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~-~ipv~vMIRPR~---GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~L 95 (256)
T 1twd_A 20 NGADRVELCAAPKEGGLTPSLGVLKSVRQRV-TIPVHPIIRPRG---GDFCYSDGEFAAILEDVRTVRELGFPGLVTGVL 95 (256)
T ss_dssp TTCSEEEECBCGGGTCBCCCHHHHHHHHHHC-CSCEEEBCCSSS---SCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCB
T ss_pred cCCCEEEEcCCcccCCCCCCHHHHHHHHHHc-CCceEEEECCCC---CCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeE
Confidence 4466888876 6778888887664 699988876532 122222 2344567789999999986531
Q ss_pred c--ccCChHHHHHHH--HhCCeEEEec---ccCChHHHHHHHHhcCceEEEeC----ChHHHHHHHHhhhccch
Q 017440 285 A--IFKNPGAIKKIK--EAKLCLVSYG---ELNNVPEVVYMQRFMGIEGVIVD----LVSEITEAVSDFIKNEE 347 (371)
Q Consensus 285 ~--~~~~~~~v~~~~--~~Gl~v~~wg---tvn~~~~~~~l~~~~GVdgIiTD----~p~~l~~~l~~~~~~~~ 347 (371)
. -.++.+.++.+- ..|+.+.... .+.|+.+..+.+.++|++.|.|- ....-.+.|+++...+.
T Consensus 96 t~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~ 169 (256)
T 1twd_A 96 DVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRD 169 (256)
T ss_dssp CTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTSSS
T ss_pred CCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCHHHHHHHHHHHHHhhC
Confidence 1 113444444432 2367765432 13455554444457999999995 34444556666554433
No 58
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=65.40 E-value=22 Score=30.73 Aligned_cols=79 Identities=16% Similarity=0.064 Sum_probs=48.0
Q ss_pred cHHHHHHHHHhCCCceEeccc------ccccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEE-------
Q 017440 263 SLDEAIKVCLAGGLQGIVSEV------RAIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVI------- 328 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~------~~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIi------- 328 (371)
.+.+.++.+...|++.+.+.. ...-..++.++.+++. +..+.+...+|+++...+...+.|+|+|+
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~ 103 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSS 103 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTT
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCcc
Confidence 466677778888888776542 1111246888888877 55544433478766443333579999995
Q ss_pred eCChHHHHHHHHh
Q 017440 329 VDLVSEITEAVSD 341 (371)
Q Consensus 329 TD~p~~l~~~l~~ 341 (371)
++.+..+.+.+++
T Consensus 104 ~~~~~~~~~~~~~ 116 (230)
T 1rpx_A 104 TIHLHRTINQIKS 116 (230)
T ss_dssp CSCHHHHHHHHHH
T ss_pred chhHHHHHHHHHH
Confidence 2344445555544
No 59
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=64.23 E-value=39 Score=25.80 Aligned_cols=51 Identities=8% Similarity=0.053 Sum_probs=32.1
Q ss_pred HHHHHHHH----hCCeEEEeccc-CChHHHHHHHHhcCceEEEeC---ChHHHHHHHHhhh
Q 017440 291 GAIKKIKE----AKLCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD---LVSEITEAVSDFI 343 (371)
Q Consensus 291 ~~v~~~~~----~Gl~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD---~p~~l~~~l~~~~ 343 (371)
++++.+++ .+.++.+. +- .+.+...+++ ..|+++++.- .+..+.+.++...
T Consensus 68 ~~~~~lr~~~~~~~~pii~~-s~~~~~~~~~~~~-~~ga~~~l~Kp~~~~~~l~~~i~~~l 126 (144)
T 3kht_A 68 EVMSAVRKPGANQHTPIVIL-TDNVSDDRAKQCM-AAGASSVVDKSSNNVTDFYGRIYAIF 126 (144)
T ss_dssp HHHHHHHSSSTTTTCCEEEE-ETTCCHHHHHHHH-HTTCSEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccCCCEEEE-eCCCCHHHHHHHH-HcCCCEEEECCCCcHHHHHHHHHHHH
Confidence 56667766 34677777 44 4455555554 6999999875 4556665555543
No 60
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=63.46 E-value=19 Score=32.05 Aligned_cols=70 Identities=19% Similarity=0.078 Sum_probs=49.2
Q ss_pred ecCCHHHHHHHHHHCCCCCeEE-EcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEE
Q 017440 226 SSFQPDAALLIRKLQSTYPVFF-LTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLV 304 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~ 304 (371)
.+|-+..++.+|+..|+.++-. +.-. .....++.+.+.|++++..+.+...--.+.++.++++|+++.
T Consensus 70 it~G~~~v~~lr~~~p~~~ldvHLmv~-----------~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~G 138 (246)
T 3inp_A 70 LTFGPMVLKALRDYGITAGMDVHLMVK-----------PVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAG 138 (246)
T ss_dssp BCCCHHHHHHHHHHTCCSCEEEEEECS-----------SCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEE
T ss_pred hhcCHHHHHHHHHhCCCCeEEEEEeeC-----------CHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEE
Confidence 3788999999999887777643 3211 123345666778999999887653112478999999999987
Q ss_pred Ee
Q 017440 305 SY 306 (371)
Q Consensus 305 ~w 306 (371)
+-
T Consensus 139 va 140 (246)
T 3inp_A 139 LA 140 (246)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 61
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=63.38 E-value=30 Score=28.36 Aligned_cols=80 Identities=16% Similarity=0.271 Sum_probs=45.2
Q ss_pred HHHHHHHHHhCCCceEeccccc---ccCChHHHHHHHHhC---CeEEEecccCChHHHHHHHHhcCceEEEeC-Ch-HHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRA---IFKNPGAIKKIKEAK---LCLVSYGELNNVPEVVYMQRFMGIEGVIVD-LV-SEI 335 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~~~~~G---l~v~~wgtvn~~~~~~~l~~~~GVdgIiTD-~p-~~l 335 (371)
.++.++.+...+++.|.+.... ...-+++++.+++.| .+|++=|.+- ..+...+ +..|+|++++. .+ ..+
T Consensus 58 ~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~-~~~~~~l-~~~G~d~v~~~~~~~~~~ 135 (161)
T 2yxb_A 58 PEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIP-IPDLEPL-RSLGIREIFLPGTSLGEI 135 (161)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCC-HHHHHHH-HHTTCCEEECTTCCHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCc-hhcHHHH-HHCCCcEEECCCCCHHHH
Confidence 4455555666666655543221 011257888899987 4465555332 2334344 57999998874 32 456
Q ss_pred HHHHHhhhcc
Q 017440 336 TEAVSDFIKN 345 (371)
Q Consensus 336 ~~~l~~~~~~ 345 (371)
.+.+.+....
T Consensus 136 ~~~~~~~~~~ 145 (161)
T 2yxb_A 136 IEKVRKLAEE 145 (161)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665544
No 62
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=63.38 E-value=19 Score=31.64 Aligned_cols=80 Identities=8% Similarity=0.022 Sum_probs=53.7
Q ss_pred ccHHHHHHHHHhCCCceEecccc------cccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEE------
Q 017440 262 SSLDEAIKVCLAGGLQGIVSEVR------AIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVI------ 328 (371)
Q Consensus 262 ~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIi------ 328 (371)
..+.+.++.+ ..|++.++.+.- .+...+..++.+++. .+.+-+.--+++++.+.+.+.+.|+|+|+
T Consensus 13 ~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~ 91 (231)
T 3ctl_A 13 LKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETI 91 (231)
T ss_dssp GGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGC
T ss_pred hhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccC
Confidence 3577777888 788887665521 122357899999886 34443332356677655555679999997
Q ss_pred eCChHHHHHHHHhh
Q 017440 329 VDLVSEITEAVSDF 342 (371)
Q Consensus 329 TD~p~~l~~~l~~~ 342 (371)
++.+..+.+.++++
T Consensus 92 ~~~~~~~i~~i~~~ 105 (231)
T 3ctl_A 92 NGQAFRLIDEIRRH 105 (231)
T ss_dssp TTTHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHc
Confidence 77788777777765
No 63
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=63.32 E-value=49 Score=27.99 Aligned_cols=95 Identities=11% Similarity=0.039 Sum_probs=46.4
Q ss_pred CeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC
Q 017440 222 PIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL 301 (371)
Q Consensus 222 ~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl 301 (371)
.++++- -.....+++. .++|+.-+--+. .++-+++..|+..+-..-.+.+......-+.+.. -.|+
T Consensus 53 dVIISR--Ggta~~lr~~-~~iPVV~I~~s~---------~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~--ll~~ 118 (196)
T 2q5c_A 53 DAIISR--GATSDYIKKS-VSIPSISIKVTR---------FDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEA--MLGV 118 (196)
T ss_dssp SEEEEE--HHHHHHHHTT-CSSCEEEECCCH---------HHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHH--HHTC
T ss_pred eEEEEC--ChHHHHHHHh-CCCCEEEEcCCH---------hHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHH--HhCC
Confidence 466653 2334455554 568887765332 2455667777766543222223332122223322 3455
Q ss_pred eEEEecccCChHHHHHH---HHhcCceEEEeCC
Q 017440 302 CLVSYGELNNVPEVVYM---QRFMGIEGVIVDL 331 (371)
Q Consensus 302 ~v~~wgtvn~~~~~~~l---~~~~GVdgIiTD~ 331 (371)
.+..+ ++++.+++... +++.|++.|+-+.
T Consensus 119 ~i~~~-~~~~~~e~~~~i~~l~~~G~~vvVG~~ 150 (196)
T 2q5c_A 119 KIKEF-LFSSEDEITTLISKVKTENIKIVVSGK 150 (196)
T ss_dssp EEEEE-EECSGGGHHHHHHHHHHTTCCEEEECH
T ss_pred ceEEE-EeCCHHHHHHHHHHHHHCCCeEEECCH
Confidence 55555 45555444332 2346777776654
No 64
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=63.27 E-value=59 Score=30.18 Aligned_cols=66 Identities=15% Similarity=0.330 Sum_probs=46.6
Q ss_pred HHHHHHHHhCCCceEecccccc-------------cCChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAI-------------FKNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~-------------~~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
.+..+.+...|++++.++.... ..+-+++..+++. +++|.+-|-+.+.+++.+++ + |+|+|+.
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l-~-GaD~V~i 224 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHL-K-RVDGVML 224 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-T-TSSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHH-h-CCCEEEE
Confidence 3444556677887777654210 0234678888776 68998888899999999987 5 9999987
Q ss_pred CCh
Q 017440 330 DLV 332 (371)
Q Consensus 330 D~p 332 (371)
-++
T Consensus 225 GRa 227 (350)
T 3b0p_A 225 GRA 227 (350)
T ss_dssp CHH
T ss_pred CHH
Confidence 653
No 65
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=63.26 E-value=48 Score=28.54 Aligned_cols=72 Identities=17% Similarity=0.206 Sum_probs=52.3
Q ss_pred HHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHH---HHHHHhh
Q 017440 266 EAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEI---TEAVSDF 342 (371)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l---~~~l~~~ 342 (371)
+-.+.+...|+++++... .+++.++..++.|..+.. | +.++.++.+.. +.|+|.|.- ||... .++++..
T Consensus 79 d~~~~A~~aGAd~v~~p~----~d~~v~~~~~~~g~~~i~-G-~~t~~e~~~A~-~~Gad~v~~-Fpa~~~gG~~~lk~i 150 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPG----LTEPLLKAATEGTIPLIP-G-ISTVSELMLGM-DYGLKEFKF-FPAEANGGVKALQAI 150 (214)
T ss_dssp HHHHHHHHHTCSCEEESS----CCHHHHHHHHHSSSCEEE-E-ESSHHHHHHHH-HTTCCEEEE-TTTTTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEcCC----CCHHHHHHHHHhCCCEEE-e-cCCHHHHHHHH-HCCCCEEEE-ecCccccCHHHHHHH
Confidence 345677888999998763 378899999999988765 3 55688887775 799999987 88321 3555555
Q ss_pred hcc
Q 017440 343 IKN 345 (371)
Q Consensus 343 ~~~ 345 (371)
..+
T Consensus 151 ~~~ 153 (214)
T 1wbh_A 151 AGP 153 (214)
T ss_dssp HTT
T ss_pred hhh
Confidence 443
No 66
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=61.94 E-value=93 Score=28.77 Aligned_cols=112 Identities=9% Similarity=-0.033 Sum_probs=64.7
Q ss_pred HHHHHHHHHHCC-CCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc----------ccCChHHHHHHHH
Q 017440 230 PDAALLIRKLQS-TYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA----------IFKNPGAIKKIKE 298 (371)
Q Consensus 230 ~~~l~~l~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----------~~~~~~~v~~~~~ 298 (371)
.++++.+|+..+ ++|+++-.................+..+.+...|++.+++.... ......+++.+++
T Consensus 206 ~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~ 285 (349)
T 3hgj_A 206 LQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRK 285 (349)
T ss_dssp HHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHH
Confidence 456667776654 67777654432100001111122333444556788888765210 0113356777766
Q ss_pred h-CCeEEEecccCChHHHHHHHHhcC-ceEEEeCC-----hHHHHHHHHhh
Q 017440 299 A-KLCLVSYGELNNVPEVVYMQRFMG-IEGVIVDL-----VSEITEAVSDF 342 (371)
Q Consensus 299 ~-Gl~v~~wgtvn~~~~~~~l~~~~G-VdgIiTD~-----p~~l~~~l~~~ 342 (371)
+ ++.|.+=|-+.+.+++.+++ +.| +|.|.--+ |+...++.+++
T Consensus 286 ~~~iPVi~~Ggi~t~e~a~~~l-~~G~aD~V~iGR~~lanPdl~~k~~~~l 335 (349)
T 3hgj_A 286 RVGLRTGAVGLITTPEQAETLL-QAGSADLVLLGRVLLRDPYFPLRAAKAL 335 (349)
T ss_dssp HHCCEEEECSSCCCHHHHHHHH-HTTSCSEEEESTHHHHCTTHHHHHHHHT
T ss_pred HcCceEEEECCCCCHHHHHHHH-HCCCceEEEecHHHHhCchHHHHHHHHC
Confidence 4 78888777788899998887 577 99998765 44555555444
No 67
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=61.10 E-value=89 Score=27.67 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=31.2
Q ss_pred ChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 289 NPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 289 ~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+++.++.+++. +++|.+=|-+++++++.+++ +.|+|||+.-.
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~-~~GAdgViVGS 208 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAM-ELGADGVLLNT 208 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HTTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEEcH
Confidence 45677777665 47777654588899998885 79999998654
No 68
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=60.64 E-value=95 Score=28.74 Aligned_cols=90 Identities=9% Similarity=0.111 Sum_probs=56.4
Q ss_pred HHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC---eEEEeccc
Q 017440 233 ALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL---CLVSYGEL 309 (371)
Q Consensus 233 l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl---~v~~wgtv 309 (371)
++.+++..|+....+.+... ......+.+...|+ ++.+ .+..-+..++++|+ .+...+..
T Consensus 31 ~~~l~~~~~~~~~~~~vKan----------~~~~v~~~l~~~G~-g~~v------as~~E~~~~~~~G~~~~~I~~~~~~ 93 (372)
T 2nva_A 31 IDQWTILFPRVTPHYAVKCN----------NDEVLLKTMCDKNV-NFDC------ASSSEIKKVIQIGVSPSRIIFAHTM 93 (372)
T ss_dssp HHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHTTC-EEEE------CSHHHHHHHHHHTCCGGGEEECCSC
T ss_pred HHHHHHhCCCCeEEEEeeeC----------CCHHHHHHHHHcCC-cEEE------cCHHHHHHHHHcCCCHHHEEECCCC
Confidence 44566666665555555432 22344555566776 5543 25666777888886 35554344
Q ss_pred CChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 310 NNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 310 n~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
.+++++..++ +.|+..+..|..+.+..+.+
T Consensus 94 k~~~~l~~a~-~~~v~~~~vds~~~l~~l~~ 123 (372)
T 2nva_A 94 KTIDDLIFAK-DQGVDIATFDSSFELDKIHT 123 (372)
T ss_dssp CCHHHHHHHH-HHTCCEEEECSHHHHHHHHH
T ss_pred CCHHHHHHHH-HCCCCEEEeCCHHHHHHHHH
Confidence 5667777775 68887788899888887644
No 69
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=60.46 E-value=26 Score=31.43 Aligned_cols=43 Identities=19% Similarity=0.277 Sum_probs=36.3
Q ss_pred CChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 288 KNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 288 ~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.++++++.+++. +++|.+=|-+.+++++..++ ++|+|||+.+-
T Consensus 174 ~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~Am-eLGAdgVlVgS 217 (265)
T 1wv2_A 174 CNPYNLRIILEEAKVPVLVDAGVGTASDAAIAM-ELGCEAVLMNT 217 (265)
T ss_dssp SCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HHTCSEEEESH
T ss_pred CCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-HcCCCEEEECh
Confidence 378888999887 68888877799999998886 79999998765
No 70
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=60.30 E-value=45 Score=32.70 Aligned_cols=99 Identities=9% Similarity=0.079 Sum_probs=62.6
Q ss_pred CCeEEecCC------HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccc---cc-----
Q 017440 221 RPIMFSSFQ------PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVR---AI----- 286 (371)
Q Consensus 221 ~~v~i~Sf~------~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~----- 286 (371)
+.+.+.+-+ .+.++.+++..|+.++..-.- .+.+. .+.+...|++++.+... ..
T Consensus 245 d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v-----------~t~e~-a~~l~~aGaD~I~Vg~g~Gs~~~tr~~ 312 (496)
T 4fxs_A 245 DVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV-----------ATAEG-ARALIEAGVSAVKVGIGPGSICTTRIV 312 (496)
T ss_dssp SEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEE-----------CSHHH-HHHHHHHTCSEEEECSSCCTTBCHHHH
T ss_pred ceEEeccccccchHHHHHHHHHHHHCCCceEEEccc-----------CcHHH-HHHHHHhCCCEEEECCCCCcCcccccc
Confidence 355555433 267888888888888755110 12333 35566779988875310 00
Q ss_pred ----cCC----hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCCh
Q 017440 287 ----FKN----PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 287 ----~~~----~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p 332 (371)
..+ ++..+.+++.+++|.+=|-+.+..++.+++ .+|+|+|+.=..
T Consensus 313 ~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a~GAd~V~iGs~ 365 (496)
T 4fxs_A 313 TGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI-AAGASCVMVGSM 365 (496)
T ss_dssp HCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred cCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHH-HcCCCeEEecHH
Confidence 001 233444445689999877788999998886 699999997754
No 71
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=60.04 E-value=20 Score=31.77 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=38.8
Q ss_pred HHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 269 KVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 269 ~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
+.+...|+++|++....+ ....++.+...+..+.+ ++.+.+++.+.. ..|+|.|...
T Consensus 106 ~lA~~~gAdGVHLg~~dl--~~~~~r~~~~~~~~iG~--S~ht~~Ea~~A~-~~GaDyI~vg 162 (243)
T 3o63_A 106 DIARAAGADVLHLGQRDL--PVNVARQILAPDTLIGR--STHDPDQVAAAA-AGDADYFCVG 162 (243)
T ss_dssp HHHHHHTCSEEEECTTSS--CHHHHHHHSCTTCEEEE--EECSHHHHHHHH-HSSCSEEEEC
T ss_pred HHHHHhCCCEEEecCCcC--CHHHHHHhhCCCCEEEE--eCCCHHHHHHHh-hCCCCEEEEc
Confidence 456678999999875542 44555555445566655 467788887775 6899999764
No 72
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=59.19 E-value=46 Score=28.92 Aligned_cols=70 Identities=14% Similarity=0.043 Sum_probs=46.3
Q ss_pred ecCCHHHHHHHHHHC-CCCCeEE-EcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeE
Q 017440 226 SSFQPDAALLIRKLQ-STYPVFF-LTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCL 303 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~-p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v 303 (371)
.+|.+..++.+|+.. ++.++-. +.-.. ....++.+...|++++.++.+...--.+.++.++++|.++
T Consensus 47 ~~~G~~~v~~ir~~~~~~~~~dvhLmv~~-----------p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~ 115 (228)
T 3ovp_A 47 ITFGHPVVESLRKQLGQDPFFDMHMMVSK-----------PEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKV 115 (228)
T ss_dssp BCBCHHHHHHHHHHHCSSSCEEEEEECSC-----------GGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEE
T ss_pred cccCHHHHHHHHHhhCCCCcEEEEEEeCC-----------HHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCE
Confidence 368899999999885 7776642 22111 1122345556899999888764211236899999999987
Q ss_pred EEe
Q 017440 304 VSY 306 (371)
Q Consensus 304 ~~w 306 (371)
.+-
T Consensus 116 gva 118 (228)
T 3ovp_A 116 GLA 118 (228)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 73
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=59.02 E-value=85 Score=26.83 Aligned_cols=41 Identities=17% Similarity=0.366 Sum_probs=33.0
Q ss_pred hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 290 PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
-+.++.+++.+++|.+=|-+++.+.+.+++ +.|+|+++.=.
T Consensus 176 ~~~i~~~~~~~ipvia~GGI~s~~~~~~~~-~~Gad~v~vGs 216 (234)
T 1yxy_A 176 VALIEALCKAGIAVIAEGKIHSPEEAKKIN-DLGVAGIVVGG 216 (234)
T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHH-TTCCSEEEECH
T ss_pred HHHHHHHHhCCCCEEEECCCCCHHHHHHHH-HCCCCEEEEch
Confidence 356777776688888877799999998886 68999998654
No 74
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=58.23 E-value=1.1e+02 Score=27.91 Aligned_cols=110 Identities=17% Similarity=0.257 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHhcCCCCeEEecCCHH-----------HHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHh
Q 017440 205 HALEAILKVVFEHAQGRPIMFSSFQPD-----------AALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLA 273 (371)
Q Consensus 205 ~~~~~vl~~l~~~~~~~~v~i~Sf~~~-----------~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (371)
..++.+++.-++. ..+++++..... .+..+.+ ..+|+.+=.+-+. ++ +.+..|..
T Consensus 28 e~~~Ail~AAee~--~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~VPValHlDHg~---------~~-e~~~~ai~ 93 (305)
T 1rvg_A 28 EFLQAVLEAAEEQ--RSPVILALSEGAMKYGGRALTLMAVELAKE--ARVPVAVHLDHGS---------SY-ESVLRALR 93 (305)
T ss_dssp HHHHHHHHHHHHT--TCCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CSSCEEEEEEEEC---------SH-HHHHHHHH
T ss_pred HHHHHHHHHHHHh--CCCEEEECChhHHhhCCHHHHHHHHHHHHh--CCCcEEEECCCCC---------CH-HHHHHHHH
Confidence 4566666666654 456777753321 2222223 6788887554321 23 33455678
Q ss_pred CCCceEeccccc------ccCChHHHHHHHHhCCeEEEe-----cc------------cCChHHHHHHHHhcCceEEE
Q 017440 274 GGLQGIVSEVRA------IFKNPGAIKKIKEAKLCLVSY-----GE------------LNNVPEVVYMQRFMGIEGVI 328 (371)
Q Consensus 274 ~~~~~v~~~~~~------~~~~~~~v~~~~~~Gl~v~~w-----gt------------vn~~~~~~~l~~~~GVdgIi 328 (371)
.|++++..+.+. +..|.+.++.+|+.|+.|=+= |. .-++++..++..+.|||.+-
T Consensus 94 ~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LA 171 (305)
T 1rvg_A 94 AGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLA 171 (305)
T ss_dssp TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEE
T ss_pred cCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEE
Confidence 899988876543 235778999999999876421 10 12466666666567777653
No 75
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=56.92 E-value=67 Score=24.97 Aligned_cols=116 Identities=8% Similarity=0.084 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc
Q 017440 206 ALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA 285 (371)
Q Consensus 206 ~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 285 (371)
+-..+.+.+.+.+ .++++...+++.+..+++ .+++.. ..... -.+.++.+.-.+++.+......
T Consensus 18 ~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~--~g~~~i--~gd~~----------~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 18 VGSLLGEKLLASD--IPLVVIETSRTRVDELRE--RGVRAV--LGNAA----------NEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp HHHHHHHHHHHTT--CCEEEEESCHHHHHHHHH--TTCEEE--ESCTT----------SHHHHHHTTGGGCSEEEECCSC
T ss_pred HHHHHHHHHHHCC--CCEEEEECCHHHHHHHHH--cCCCEE--ECCCC----------CHHHHHhcCcccCCEEEEECCC
Confidence 4556666777665 368888889999888876 344432 22211 1122222212234554433221
Q ss_pred ccCChHHHHHHHHhC--CeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 286 IFKNPGAIKKIKEAK--LCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 286 ~~~~~~~v~~~~~~G--l~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
...+...+..+++.+ .++.+- +++.+....+ +.+|+|.++.=.-.....+.+
T Consensus 82 ~~~n~~~~~~a~~~~~~~~iiar--~~~~~~~~~l-~~~G~d~vi~p~~~~a~~i~~ 135 (140)
T 3fwz_A 82 GYEAGEIVASARAKNPDIEIIAR--AHYDDEVAYI-TERGANQVVMGEREIARTMLE 135 (140)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEE--ESSHHHHHHH-HHTTCSEEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCCeEEEE--ECCHHHHHHH-HHCCCCEEECchHHHHHHHHH
Confidence 111223455667664 555554 6777766666 579999988644344444443
No 76
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=56.61 E-value=1e+02 Score=29.80 Aligned_cols=103 Identities=14% Similarity=0.177 Sum_probs=60.4
Q ss_pred CCCeEEecCC--HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHH
Q 017440 220 GRPIMFSSFQ--PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIK 297 (371)
Q Consensus 220 ~~~v~i~Sf~--~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 297 (371)
...+++.+.+ ...++.+++..|+....+.+... .....++.+...| .++.+ .+..-+..++
T Consensus 47 ~tP~~viDl~~l~~n~~~l~~~~~~~~i~yavKAn----------~~~~v~~~l~~~G-~g~dv------aS~~E~~~~~ 109 (471)
T 2oo0_A 47 KDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCN----------DSKAIVKTLAATG-TGFDC------ASKTEIQLVQ 109 (471)
T ss_dssp CCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHHT-CEEEE------CSHHHHHHHH
T ss_pred CCcEEEEEHHHHHHHHHHHHHhCCCCeEEEEEeeC----------CCHHHHHHHHHcC-CcEEE------eCHHHHHHHH
Confidence 3456554322 22344566666655555544432 2234445555556 44432 2566677888
Q ss_pred HhCC--eEEEe-cccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 298 EAKL--CLVSY-GELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 298 ~~Gl--~v~~w-gtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
++|. ...+| |...+.+++..++ +.|+..+..|..+++..+.+
T Consensus 110 ~aG~~~~~iv~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 154 (471)
T 2oo0_A 110 SLGVPPERIIYANPCKQVSQIKYAA-NNGVQMMTFDSEVELMKVAR 154 (471)
T ss_dssp HTTCCGGGEEECCSSCCHHHHHHHH-HTTCCEEEECSHHHHHHHHH
T ss_pred HcCCChhhEEEeCCCCCHHHHHHHH-HCCCCEEEECCHHHHHHHHH
Confidence 8887 34555 1234667777765 68888788999988887654
No 77
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=56.21 E-value=24 Score=32.18 Aligned_cols=72 Identities=7% Similarity=-0.077 Sum_probs=46.4
Q ss_pred HHHHHhCCCceEeccccccc--------CChHHHHHHHHhCCeEEEecccC------ChHHHH---HHHHhcCceEEEeC
Q 017440 268 IKVCLAGGLQGIVSEVRAIF--------KNPGAIKKIKEAKLCLVSYGELN------NVPEVV---YMQRFMGIEGVIVD 330 (371)
Q Consensus 268 ~~~~~~~~~~~v~~~~~~~~--------~~~~~v~~~~~~Gl~v~~wgtvn------~~~~~~---~l~~~~GVdgIiTD 330 (371)
++.+.+.|++.|.+..+.-- .-.++++.+++.|+++++| +.. +++... ++..++|+|.|-|.
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie-~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAV-TGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEE-ECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEE-CCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 34566789888776533210 0125778889999999998 544 433222 33346999999999
Q ss_pred Ch-HHHHHHHH
Q 017440 331 LV-SEITEAVS 340 (371)
Q Consensus 331 ~p-~~l~~~l~ 340 (371)
++ +.+.++..
T Consensus 210 ~t~e~~~~vv~ 220 (295)
T 3glc_A 210 YVEKGFERIVA 220 (295)
T ss_dssp CCTTTHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 98 45555554
No 78
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=56.19 E-value=1.1e+02 Score=28.05 Aligned_cols=111 Identities=12% Similarity=0.036 Sum_probs=65.2
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccc---------cCChHHHHHHHHh-
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI---------FKNPGAIKKIKEA- 299 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~v~~~~~~- 299 (371)
.++++.+++.. ++|+++-.................+..+.+...|++++++..... ....++++.+++.
T Consensus 198 ~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 276 (338)
T 1z41_A 198 REIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA 276 (338)
T ss_dssp HHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC
Confidence 45667777766 678776554321000001111223344555677888887643210 0123566667664
Q ss_pred CCeEEEecccCChHHHHHHHHhcC-ceEEEeCC-----hHHHHHHHHhh
Q 017440 300 KLCLVSYGELNNVPEVVYMQRFMG-IEGVIVDL-----VSEITEAVSDF 342 (371)
Q Consensus 300 Gl~v~~wgtvn~~~~~~~l~~~~G-VdgIiTD~-----p~~l~~~l~~~ 342 (371)
++.|.+=|-+.+.+++.+++ +.| +|+|..=+ |+...++.+.+
T Consensus 277 ~iPVi~~Ggi~s~~~a~~~l-~~G~aD~V~iGR~~i~nPdl~~ki~~~~ 324 (338)
T 1z41_A 277 DMATGAVGMITDGSMAEEIL-QNGRADLIFIGRELLRDPFFARTAAKQL 324 (338)
T ss_dssp CCEEEECSSCCSHHHHHHHH-HTTSCSEEEECHHHHHCTTHHHHHHHHT
T ss_pred CCCEEEECCCCCHHHHHHHH-HcCCceEEeecHHHHhCchHHHHHHcCC
Confidence 78888877788999999987 577 99997644 55555555544
No 79
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=56.17 E-value=30 Score=29.82 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=47.7
Q ss_pred HHHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC-----ChH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD-----LVS 333 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD-----~p~ 333 (371)
.+.++.+...|++.+++.... .....+.++.+++. ++++.+-+.+++.+++..++ +.|+|+|... .|.
T Consensus 36 ~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~-~~Gad~V~i~~~~~~~~~ 114 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLF-RAGADKVSVNTAAVRNPQ 114 (253)
T ss_dssp HHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHCTH
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEEChHHhhCcH
Confidence 344455556666655543110 00123566666655 68888777899998887775 6899999954 355
Q ss_pred HHHHHHHhh
Q 017440 334 EITEAVSDF 342 (371)
Q Consensus 334 ~l~~~l~~~ 342 (371)
.+.++.+.+
T Consensus 115 ~~~~~~~~~ 123 (253)
T 1h5y_A 115 LVALLAREF 123 (253)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 566665553
No 80
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=56.07 E-value=25 Score=31.35 Aligned_cols=138 Identities=12% Similarity=0.113 Sum_probs=82.8
Q ss_pred CHHHHHHhcCCCceEEEEeccCCcccch---hHHHHHHHHHHHHHHHHhcCCCCeEE------ecCCHHHHHHHHHHCCC
Q 017440 172 TLQEAFEKVDQSVGFNVELKFDDQLVYT---EEELTHALEAILKVVFEHAQGRPIMF------SSFQPDAALLIRKLQST 242 (371)
Q Consensus 172 tL~evL~~~~~~~~l~iEiK~~~~~~~~---~~~~~~~~~~vl~~l~~~~~~~~v~i------~Sf~~~~l~~l~~~~p~ 242 (371)
.|.++|..- +...+..|+|..++.... ... ...+....++. ..-+-+ ..-+.+.|..+++.. +
T Consensus 30 ~f~~al~~~-~~~~vIaE~K~aSPSkG~i~~~~~----~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v-~ 101 (251)
T 1i4n_A 30 RFLEVLSGK-ERVKIIAEFKKASPSAGDINADAS----LEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLT-C 101 (251)
T ss_dssp HHHHHHCCS-SSCEEEEEECSBCSSSCBSCTTCC----HHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTC-C
T ss_pred CHHHHHhhC-CCceEEEeecCCCCCCCccCCCCC----HHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhC-C
Confidence 366666521 348899999965432110 001 12233333333 221212 112567788888753 6
Q ss_pred CCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCC----hHHHHHHHHhCCeEEEecccCChHHHHHH
Q 017440 243 YPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKN----PGAIKKIKEAKLCLVSYGELNNVPEVVYM 318 (371)
Q Consensus 243 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l 318 (371)
+|+.. .. +-...+ + +..+...|++++.+....+ + .++++.+|+.|+.+.+= +++.+++.+.
T Consensus 102 lPvLr--KD-------fi~~~~-q-i~ea~~~GAD~ilLi~a~l--~~~~l~~l~~~a~~lGl~~lvE--v~~~eE~~~A 166 (251)
T 1i4n_A 102 RPILA--KD-------FYIDTV-Q-VKLASSVGADAILIIARIL--TAEQIKEIYEAAEELGMDSLVE--VHSREDLEKV 166 (251)
T ss_dssp SCEEE--EC-------CCCSTH-H-HHHHHHTTCSEEEEEGGGS--CHHHHHHHHHHHHTTTCEEEEE--ECSHHHHHHH
T ss_pred CCEEE--ee-------CCCCHH-H-HHHHHHcCCCEEEEecccC--CHHHHHHHHHHHHHcCCeEEEE--eCCHHHHHHH
Confidence 77652 11 101223 2 3448889999988776542 3 46888899999999995 7788888888
Q ss_pred HHhc-CceEEEeCChH
Q 017440 319 QRFM-GIEGVIVDLVS 333 (371)
Q Consensus 319 ~~~~-GVdgIiTD~p~ 333 (371)
. .+ |+|.|-+|...
T Consensus 167 ~-~l~g~~iIGinnr~ 181 (251)
T 1i4n_A 167 F-SVIRPKIIGINTRD 181 (251)
T ss_dssp H-TTCCCSEEEEECBC
T ss_pred H-hcCCCCEEEEeCcc
Confidence 6 79 99999777754
No 81
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=55.56 E-value=59 Score=29.62 Aligned_cols=103 Identities=13% Similarity=0.111 Sum_probs=63.7
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccc------cCChHHHHHHHHhCCeE
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI------FKNPGAIKKIKEAKLCL 303 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~v~~~~~~Gl~v 303 (371)
.+.++.+++..+ +|+..-+..+. .+ ....+..+.+.+.|+++++++.... ..+-+.+..+++ +++|
T Consensus 115 ~eiv~~v~~~~~-~pv~vKir~G~---~~---~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~-~ipV 186 (318)
T 1vhn_A 115 RYIVRELRKSVS-GKFSVKTRLGW---EK---NEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-RIPT 186 (318)
T ss_dssp HHHHHHHHHHCS-SEEEEEEESCS---SS---CCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC-SSCE
T ss_pred HHHHHHHHHhhC-CCEEEEecCCC---Ch---HHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc-CCeE
Confidence 455566665543 56655433221 11 1222556667788888887653211 112245666666 8899
Q ss_pred EEecccCChHHHHHHHHhcCceEEEeCCh-----HHHHHHHH
Q 017440 304 VSYGELNNVPEVVYMQRFMGIEGVIVDLV-----SEITEAVS 340 (371)
Q Consensus 304 ~~wgtvn~~~~~~~l~~~~GVdgIiTD~p-----~~l~~~l~ 340 (371)
.+-|-+.+.+++.+++...|+|+|+.-++ ..+.++..
T Consensus 187 i~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 187 FVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp EEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHH
Confidence 88888899999999874479999998875 44455544
No 82
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=55.39 E-value=49 Score=28.81 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=34.1
Q ss_pred ChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 289 NPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 289 ~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
+.++++.+.+.+++|.+-|-+++.+++.+++ ++|+||++.=
T Consensus 170 ~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~-~~GadgV~VG 210 (232)
T 3igs_A 170 DLPLVKALHDAGCRVIAEGRYNSPALAAEAI-RYGAWAVTVG 210 (232)
T ss_dssp CHHHHHHHHHTTCCEEEESCCCSHHHHHHHH-HTTCSEEEEC
T ss_pred CHHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HcCCCEEEEe
Confidence 4577888887789999888899999998886 7999999753
No 83
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=54.69 E-value=76 Score=29.03 Aligned_cols=97 Identities=12% Similarity=0.150 Sum_probs=60.0
Q ss_pred HHHHHHHHHC--------CCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccc----------------
Q 017440 231 DAALLIRKLQ--------STYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAI---------------- 286 (371)
Q Consensus 231 ~~l~~l~~~~--------p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------------- 286 (371)
+.++.+++.. +++|+..-.... .......+..+.+.+.|+++|.+.....
T Consensus 192 ~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~------~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg 265 (336)
T 1f76_A 192 DLLTAIKNKQNDLQAMHHKYVPIAVKIAPD------LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGG 265 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEECCSC------CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSE
T ss_pred HHHHHHHHHHHhhhhcccccCceEEEecCC------CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCC
Confidence 5666666654 367776644321 1001234445667778888887542110
Q ss_pred cC-------ChHHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEeCChHH
Q 017440 287 FK-------NPGAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSE 334 (371)
Q Consensus 287 ~~-------~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~ 334 (371)
+. .-+.++.++++ ++.|.+=|-+.+.+++.+++ ..|+|+|..=++-.
T Consensus 266 ~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l-~~GAd~V~igr~~l 322 (336)
T 1f76_A 266 LSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKI-AAGASLVQIYSGFI 322 (336)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHH
T ss_pred cCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH-HCCCCEEEeeHHHH
Confidence 00 11456667664 68888877899999999987 58999997655433
No 84
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=54.69 E-value=71 Score=24.57 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=33.6
Q ss_pred HHHHHHHHhC--CeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhccc
Q 017440 291 GAIKKIKEAK--LCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIKNE 346 (371)
Q Consensus 291 ~~v~~~~~~G--l~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~~~ 346 (371)
++++.+++.+ .+|.+. +- .+.+...+++ ..|+++++.- .+..+.+.++...+..
T Consensus 78 ~~~~~l~~~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~l~Kp~~~~~l~~~i~~~~~~~ 136 (152)
T 3eul_A 78 QVAAAVRSYELPTRVLLI-SAHDEPAIVYQAL-QQGAAGFLLKDSTRTEIVKAVLDCAKGR 136 (152)
T ss_dssp HHHHHHHHTTCSCEEEEE-ESCCCHHHHHHHH-HTTCSEEEETTCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCCeEEEE-EccCCHHHHHHHH-HcCCCEEEecCCCHHHHHHHHHHHHcCC
Confidence 5666666654 567766 44 3444455554 6999999875 3466666666655443
No 85
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=54.32 E-value=97 Score=28.95 Aligned_cols=61 Identities=18% Similarity=0.202 Sum_probs=42.7
Q ss_pred HHHHHHHhCCCceEecccccccCC---hHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 266 EAIKVCLAGGLQGIVSEVRAIFKN---PGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~~~~~~---~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
+.++.+...|++.++++...- .. .+.++.+++. +++|.+- .+.+.+++..+. +.|+|+|..
T Consensus 108 e~a~~l~eaGad~I~ld~a~G-~~~~~~~~i~~i~~~~~~~Vivg-~v~t~e~A~~l~-~aGaD~I~V 172 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVLDSAHG-HSLNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELI-ENGADGIKV 172 (361)
T ss_dssp HHHHHHHHTTCSEEEECCSCC-SBHHHHHHHHHHHHHCCCEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHcCcCeEEEeCCCC-CcHHHHHHHHHHHHhcCCcEEEc-cCCCHHHHHHHH-HcCcCEEEE
Confidence 345556677888887653321 11 2466777776 8888875 688888888875 799999986
No 86
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=54.12 E-value=28 Score=32.58 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=30.8
Q ss_pred hHHHHHHHHhCCeEEEeccc-----C--------ChHHHHHHHHhcCceEEEeCCh
Q 017440 290 PGAIKKIKEAKLCLVSYGEL-----N--------NVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtv-----n--------~~~~~~~l~~~~GVdgIiTD~p 332 (371)
+.+++++|++|+++..|... . ..+...+.+.++|||+|=.|+.
T Consensus 77 ~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 77 KALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECcc
Confidence 36899999999999988311 1 1233344456899999999984
No 87
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=54.04 E-value=28 Score=30.10 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=52.2
Q ss_pred cCCHHHHHHHHHHCCCCCeE--EEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCC-hHHHHHHHHhCCeE
Q 017440 227 SFQPDAALLIRKLQSTYPVF--FLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKN-PGAIKKIKEAKLCL 303 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~v~~~~~~Gl~v 303 (371)
++..+.++.+++.. +.+.. +.+... .+.++.+...|++++.++....... .+.++.+++.|+.+
T Consensus 50 ~~~~~~~~~lr~~~-~~~~~v~lmv~d~------------~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~i 116 (228)
T 1h1y_A 50 TIGAPVIQSLRKHT-KAYLDCHLMVTNP------------SDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRP 116 (228)
T ss_dssp CBCHHHHHHHHTTC-CSEEEEEEESSCG------------GGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEE
T ss_pred hhCHHHHHHHHhhc-CCcEEEEEEecCH------------HHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCE
Confidence 66778888888765 33332 444221 1124455568999997765543234 56799999999988
Q ss_pred EEecccCChH-HHHHHHHhc--CceEEEe
Q 017440 304 VSYGELNNVP-EVVYMQRFM--GIEGVIV 329 (371)
Q Consensus 304 ~~wgtvn~~~-~~~~l~~~~--GVdgIiT 329 (371)
++-...+++. .+..+. .. ++|.|..
T Consensus 117 gv~~~p~t~~e~~~~~~-~~~~~~d~vl~ 144 (228)
T 1h1y_A 117 GVSLRPGTPVEEVFPLV-EAENPVELVLV 144 (228)
T ss_dssp EEEECTTSCGGGGHHHH-HSSSCCSEEEE
T ss_pred EEEEeCCCCHHHHHHHH-hcCCCCCEEEE
Confidence 7531123333 333443 34 8888865
No 88
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=53.40 E-value=8.2 Score=33.86 Aligned_cols=31 Identities=26% Similarity=0.161 Sum_probs=26.0
Q ss_pred ccccchHHHHHHHHhCCCCEEEEEEeeecCCeEE
Q 017440 73 SIKENTILSFNAAARHPLDFIEFDVQVTRDGCPV 106 (371)
Q Consensus 73 ~~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lV 106 (371)
.-.+|.....+.+.+.|+|++++|+ +||..|
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi---~DG~fv 44 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDV---MDGRFV 44 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEE---EBSSSS
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEE---EecCCC
Confidence 3478999999999999999999999 466544
No 89
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=52.91 E-value=31 Score=30.00 Aligned_cols=81 Identities=17% Similarity=0.075 Sum_probs=51.1
Q ss_pred ccHHHHHHHHHhCCCceEecccc------cccCChHHHHHHHHhC-CeEEEecccCChHHHHHHHHhcCceEE-------
Q 017440 262 SSLDEAIKVCLAGGLQGIVSEVR------AIFKNPGAIKKIKEAK-LCLVSYGELNNVPEVVYMQRFMGIEGV------- 327 (371)
Q Consensus 262 ~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~v~~~~~~G-l~v~~wgtvn~~~~~~~l~~~~GVdgI------- 327 (371)
..+.+.++.+...|++.+++..- .+-..++.++.+++.- +.+.+.--++|++.+.+.+.+.|+|||
T Consensus 17 ~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~ 96 (230)
T 1tqj_A 17 SRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHN 96 (230)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTT
T ss_pred hHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcccc
Confidence 35677788888888888766531 1122458889888763 444433245777655555557999999
Q ss_pred EeCChHHHHHHHHhh
Q 017440 328 IVDLVSEITEAVSDF 342 (371)
Q Consensus 328 iTD~p~~l~~~l~~~ 342 (371)
.+|.+....+.+++.
T Consensus 97 ~~~~~~~~~~~i~~~ 111 (230)
T 1tqj_A 97 ASPHLHRTLCQIREL 111 (230)
T ss_dssp TCTTHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHc
Confidence 335566666665544
No 90
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=52.41 E-value=73 Score=27.43 Aligned_cols=74 Identities=9% Similarity=0.025 Sum_probs=46.4
Q ss_pred HHHHHHhCCCceEecccc-----cccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC-----ChHHH
Q 017440 267 AIKVCLAGGLQGIVSEVR-----AIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD-----LVSEI 335 (371)
Q Consensus 267 ~~~~~~~~~~~~v~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD-----~p~~l 335 (371)
..+.+...|++.+++... ..... +.++.+++. ++++.+-|-+++++++..++ +.|+|+|... +|..+
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l-~~Gad~V~lg~~~l~~p~~~ 114 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAAL-ATGCTRVNLGTAALETPEWV 114 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHHCHHHH
T ss_pred HHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHH-HcCCCEEEECchHhhCHHHH
Confidence 334445566666654321 01122 567777654 78888777788888887775 6899998864 45566
Q ss_pred HHHHHhh
Q 017440 336 TEAVSDF 342 (371)
Q Consensus 336 ~~~l~~~ 342 (371)
.++++.+
T Consensus 115 ~~~~~~~ 121 (244)
T 1vzw_A 115 AKVIAEH 121 (244)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6666653
No 91
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=52.39 E-value=53 Score=28.57 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=33.9
Q ss_pred ChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 289 NPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 289 ~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
+-++++.+.+.+++|.+-|-+++++++.+++ ++|+|||+.=
T Consensus 170 ~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~-~~GadgV~VG 210 (229)
T 3q58_A 170 DLAMVTQLSHAGCRVIAEGRYNTPALAANAI-EHGAWAVTVG 210 (229)
T ss_dssp CHHHHHHHHTTTCCEEEESSCCSHHHHHHHH-HTTCSEEEEC
T ss_pred CHHHHHHHHHcCCCEEEECCCCCHHHHHHHH-HcCCCEEEEc
Confidence 4467888877789999888899999999986 6999999854
No 92
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=52.10 E-value=45 Score=29.57 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=41.5
Q ss_pred HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEE
Q 017440 231 DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVS 305 (371)
Q Consensus 231 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~ 305 (371)
+.++.+++..|++|+.++.... ......+...++.+...|++++....-..--...+++.++++|+.+..
T Consensus 83 ~~v~~ir~~~~~~Pi~~m~y~n-----~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~ 152 (262)
T 2ekc_A 83 ELSETLRKEFPDIPFLLMTYYN-----PIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVP 152 (262)
T ss_dssp HHHHHHHHHCTTSCEEEECCHH-----HHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHhhcCCCCEEEEecCc-----HHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEE
Confidence 4566777776678887753210 001113456677788899998876522111123577888999988543
No 93
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=51.96 E-value=85 Score=28.43 Aligned_cols=109 Identities=14% Similarity=0.109 Sum_probs=63.9
Q ss_pred CCCCeEEecC--------CHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcc-----cHHHHHHHHHhCCCceEeccc--
Q 017440 219 QGRPIMFSSF--------QPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRS-----SLDEAIKVCLAGGLQGIVSEV-- 283 (371)
Q Consensus 219 ~~~~v~i~Sf--------~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~-- 283 (371)
-.+|+-+.+- +...++.+++.. ++|+..++.+.. .++-++ -+.+-+..+++.|+++|+...
T Consensus 59 GAdRIELc~~l~~GGlTPS~g~i~~a~~~~-~ipV~vMIRPRg---GdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~ 134 (287)
T 3iwp_A 59 GADRIELCSGLSEGGTTPSMGVLQVVKQSV-QIPVFVMIRPRG---GDFLYSDREIEVMKADIRLAKLYGADGLVFGALT 134 (287)
T ss_dssp TCSEEEECBCGGGTCBCCCHHHHHHHHTTC-CSCEEEECCSSS---SCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBC
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHhc-CCCeEEEEecCC---CCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeC
Confidence 3568888764 778888888754 699988886542 122222 234457778899999999764
Q ss_pred ccccCChHHHHHH-HHh-CCeEEEecc---cCChHHHHHHHHhcCceEEEeCC
Q 017440 284 RAIFKNPGAIKKI-KEA-KLCLVSYGE---LNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 284 ~~~~~~~~~v~~~-~~~-Gl~v~~wgt---vn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
..-.++.+..+.+ ..+ ++.+....- +.|+.+..+.+.++|+|.|.|--
T Consensus 135 ~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG 187 (287)
T 3iwp_A 135 EDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSG 187 (287)
T ss_dssp TTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECT
T ss_pred CCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCC
Confidence 1111333333332 222 455544411 22344443434478999999853
No 94
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=51.05 E-value=48 Score=28.27 Aligned_cols=60 Identities=12% Similarity=0.046 Sum_probs=46.3
Q ss_pred HHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChH
Q 017440 266 EAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVS 333 (371)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~ 333 (371)
+-.+.+...|+++++... .+.+.++.+++.|..+..- +.++.++.+.. +.|+|.|.- +|.
T Consensus 74 d~~~~A~~~GAd~v~~~~----~d~~v~~~~~~~g~~~i~G--~~t~~e~~~A~-~~Gad~v~~-fpa 133 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG----LLEEVAALAQARGVPYLPG--VLTPTEVERAL-ALGLSALKF-FPA 133 (207)
T ss_dssp HHHHHHHHHTCSEEEESS----CCHHHHHHHHHHTCCEEEE--ECSHHHHHHHH-HTTCCEEEE-TTT
T ss_pred HHHHHHHHcCCCEEEcCC----CCHHHHHHHHHhCCCEEec--CCCHHHHHHHH-HCCCCEEEE-ecC
Confidence 445777888999998663 2688999999999887653 55678887775 699999977 874
No 95
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=50.82 E-value=13 Score=25.76 Aligned_cols=46 Identities=13% Similarity=0.049 Sum_probs=29.1
Q ss_pred EEecCCCCCCccCCchhhhcccccchHHHHHHHHhCC-CCEEEEEEeeecCCeEEEe
Q 017440 53 VMGHRGSGMNMLQSSDQRMKSIKENTILSFNAAARHP-LDFIEFDVQVTRDGCPVIF 108 (371)
Q Consensus 53 iiAHRG~~~~~~~~~~~~~~~~PENTl~Af~~A~~~G-ad~IE~DV~lTkDG~lVv~ 108 (371)
..+|+|+.+.. .|-=|=-+.+..|+..- -|-+|+-|- ++||++|++
T Consensus 13 p~~~kgg~g~e---------tyYInIPaeI~kaLgIk~gD~fel~ve-~kdgeIvLc 59 (68)
T 3o27_A 13 PRAYKGGSGHT---------TFYLLIPKDIAEALDIKPDDTFILNME-QKDGDIVLS 59 (68)
T ss_dssp CEEC-----CC---------CEEEEECHHHHHHTTCCTTCCEEEEEE-EETTEEEEE
T ss_pred eeeeeCCCCce---------EEEEeCcHHHHHHhCCCCCCEEEEEEe-cCCCeEEEE
Confidence 35899998532 45556667888887642 578888887 899988775
No 96
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=50.80 E-value=79 Score=27.14 Aligned_cols=76 Identities=9% Similarity=-0.046 Sum_probs=49.4
Q ss_pred HHHHHHHHhCCCceEecccc-----cccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC-----ChH
Q 017440 265 DEAIKVCLAGGLQGIVSEVR-----AIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD-----LVS 333 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD-----~p~ 333 (371)
.+..+.+...|++.+++... ..... ..++.+++. ++++.+-|-+++++++..++ +.|+|+|+.. +|.
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l-~~Gad~V~lg~~~l~~p~ 111 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAAL-ATGCARVNVGTAALENPQ 111 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHHCHH
T ss_pred HHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HcCCCEEEECchHhhChH
Confidence 33444555667776665421 01112 667777665 78888877788888888876 6999999875 455
Q ss_pred HHHHHHHhh
Q 017440 334 EITEAVSDF 342 (371)
Q Consensus 334 ~l~~~l~~~ 342 (371)
.+.++++.+
T Consensus 112 ~~~~~~~~~ 120 (244)
T 2y88_A 112 WCARVIGEH 120 (244)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 666666654
No 97
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=50.72 E-value=1.3e+02 Score=26.27 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=47.5
Q ss_pred HhCCCceEecccccccCChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEeCC-----hHHHHHHHHh
Q 017440 272 LAGGLQGIVSEVRAIFKNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL-----VSEITEAVSD 341 (371)
Q Consensus 272 ~~~~~~~v~~~~~~~~~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~-----p~~l~~~l~~ 341 (371)
+..+...|.+.+.....+.++++++++. ++++.+=|-+.+++++++++ .|+|+|+... |+.+.+.++.
T Consensus 150 ~~~g~~~VYld~sG~~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~--~gAD~VVVGSa~v~~p~~~~~~v~a 224 (228)
T 3vzx_A 150 ELLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA--EHADVIVVGNAVYEDFDRALKTVAA 224 (228)
T ss_dssp HHTTCSEEEEECTTSCCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH--TTCSEEEECTHHHHCHHHHHHHHHH
T ss_pred HHcCCCEEEecCCCCcCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH--hCCCEEEEChHHhcCHHHHHHHHHH
Confidence 3445666655553333478999999987 47877655699999998885 5999998754 5555555543
No 98
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=47.99 E-value=44 Score=30.05 Aligned_cols=139 Identities=10% Similarity=-0.023 Sum_probs=85.9
Q ss_pred cCHHHHHHhc--CCCceEEEEeccCCcccc---hhHHHHHHHHHHHHHHHHhcCCCCeEEe------cCCHHHHHHHHHH
Q 017440 171 CTLQEAFEKV--DQSVGFNVELKFDDQLVY---TEEELTHALEAILKVVFEHAQGRPIMFS------SFQPDAALLIRKL 239 (371)
Q Consensus 171 ptL~evL~~~--~~~~~l~iEiK~~~~~~~---~~~~~~~~~~~vl~~l~~~~~~~~v~i~------Sf~~~~l~~l~~~ 239 (371)
..|.++|..- .++..+.-|+|..++... .... ...+.....+.|.. -+-+. .-+.+.+..+++.
T Consensus 44 ~~f~~al~~~~~~~~~~vIaE~KraSPSkG~i~~~~d----p~~~A~~y~~~GA~-~IsVltd~~~f~Gs~~~L~~ir~~ 118 (272)
T 3tsm_A 44 RGFLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFD----PPALAKAYEEGGAA-CLSVLTDTPSFQGAPEFLTAARQA 118 (272)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEECSEETTTEESCSSCC----HHHHHHHHHHTTCS-EEEEECCSTTTCCCHHHHHHHHHT
T ss_pred CCHHHHHhhccccCCceEEEEeccCCCCCCccCCCCC----HHHHHHHHHHCCCC-EEEEeccccccCCCHHHHHHHHHh
Confidence 4588888654 246899999997543210 0001 12344445555533 22221 0267788888765
Q ss_pred CCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCCh----HHHHHHHHhCCeEEEecccCChHHH
Q 017440 240 QSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNP----GAIKKIKEAKLCLVSYGELNNVPEV 315 (371)
Q Consensus 240 ~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~v~~~~~~Gl~v~~wgtvn~~~~~ 315 (371)
. ++|+..- .. .. ..+ -+..+...|+++|.+....+ ++ ++++.+++.|+.+.+= +++.+++
T Consensus 119 v-~lPVl~K--df---i~----d~~--qi~ea~~~GAD~VlLi~a~L--~~~~l~~l~~~a~~lGl~~lve--vh~~eEl 182 (272)
T 3tsm_A 119 C-SLPALRK--DF---LF----DPY--QVYEARSWGADCILIIMASV--DDDLAKELEDTAFALGMDALIE--VHDEAEM 182 (272)
T ss_dssp S-SSCEEEE--SC---CC----STH--HHHHHHHTTCSEEEEETTTS--CHHHHHHHHHHHHHTTCEEEEE--ECSHHHH
T ss_pred c-CCCEEEC--Cc---cC----CHH--HHHHHHHcCCCEEEEccccc--CHHHHHHHHHHHHHcCCeEEEE--eCCHHHH
Confidence 3 5777421 11 01 111 24567889999988765532 43 5778889999999885 7788888
Q ss_pred HHHHHhcCceEEEeCC
Q 017440 316 VYMQRFMGIEGVIVDL 331 (371)
Q Consensus 316 ~~l~~~~GVdgIiTD~ 331 (371)
.+.+ .+|+|.|-+|.
T Consensus 183 ~~A~-~~ga~iIGinn 197 (272)
T 3tsm_A 183 ERAL-KLSSRLLGVNN 197 (272)
T ss_dssp HHHT-TSCCSEEEEEC
T ss_pred HHHH-hcCCCEEEECC
Confidence 8875 79999887773
No 99
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=47.95 E-value=82 Score=27.94 Aligned_cols=69 Identities=17% Similarity=0.233 Sum_probs=47.6
Q ss_pred cHHHHHHHHHhCCCceEecccccccCCh----HHHHHHHHhCCeEEEe-c-------ccCChHHHH----HHHHhcCceE
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRAIFKNP----GAIKKIKEAKLCLVSY-G-------ELNNVPEVV----YMQRFMGIEG 326 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~v~~~~~~Gl~v~~w-g-------tvn~~~~~~----~l~~~~GVdg 326 (371)
.+.+.++.|+.+|++.|-++...+-++. ++|+.+++.|++|..= | ..-++.++. +.+ +.|++.
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~L-eAGA~~ 164 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDL-DAGADY 164 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHH-HHTCSE
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHH-HCCCcE
Confidence 4788899999999998876654433333 5899999999999763 1 011233332 233 589999
Q ss_pred EEeCCh
Q 017440 327 VIVDLV 332 (371)
Q Consensus 327 IiTD~p 332 (371)
||.+--
T Consensus 165 ViiEar 170 (251)
T 1qwg_A 165 VIIEGR 170 (251)
T ss_dssp EEECCT
T ss_pred EEEeee
Confidence 999875
No 100
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=47.82 E-value=34 Score=32.67 Aligned_cols=61 Identities=18% Similarity=0.202 Sum_probs=43.5
Q ss_pred HHHHHHHhCCCceEecccccccCC---hHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 266 EAIKVCLAGGLQGIVSEVRAIFKN---PGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~~~~~~---~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
+.++.+...|++.|.++...- .. .+.++.++++ +++|.+- ++.+.+++..+. +.|+|+|+.
T Consensus 147 e~~~~lveaGvdvIvldta~G-~~~~~~e~I~~ik~~~~i~Vi~g-~V~t~e~A~~a~-~aGAD~I~v 211 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHG-HSLNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELI-ENGADGIKV 211 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCC-SBHHHHHHHHHHHTTCCCEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCC-CcccHHHHHHHHHhcCCCeEEEe-ecCCHHHHHHHH-HcCCCEEEE
Confidence 335556667888887543221 12 4677888887 8888875 688888888885 799999988
No 101
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=47.71 E-value=1.3e+02 Score=27.98 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=66.1
Q ss_pred ecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccc------cccCChHHHHHHHHh
Q 017440 226 SSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVR------AIFKNPGAIKKIKEA 299 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~v~~~~~~ 299 (371)
.++.++.++.+++.. +.|+..-.- .+.+ ..+.+...|+++|.+... ....+-+.+.+++++
T Consensus 214 ~~~~~~~i~~lr~~~-~~PvivK~v-----------~~~e-~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~ 280 (368)
T 2nli_A 214 QKISPRDIEEIAGHS-GLPVFVKGI-----------QHPE-DADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAER 280 (368)
T ss_dssp SBCCHHHHHHHHHHS-SSCEEEEEE-----------CSHH-HHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHc-CCCEEEEcC-----------CCHH-HHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHH
Confidence 357888999999875 467654210 1223 345667889998887421 111233555666543
Q ss_pred ---CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHH
Q 017440 300 ---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEIT 336 (371)
Q Consensus 300 ---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~ 336 (371)
.+.|++=|-+.+..++.+++ .+|+|+|..-+|-...
T Consensus 281 v~~~ipVia~GGI~~g~D~~kal-alGAd~V~iGr~~l~~ 319 (368)
T 2nli_A 281 VNKRVPIVFDSGVRRGEHVAKAL-ASGADVVALGRPVLFG 319 (368)
T ss_dssp HTTSSCEEECSSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred hCCCCeEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHHH
Confidence 58888888899999999987 6999999999886554
No 102
>2yxx_A Diaminopimelate decarboxylase; TM1517, TIM beta/alpha barrel fold, lyase, structural genomi NPPSFA; HET: PLP; 1.70A {Thermotoga maritima}
Probab=47.54 E-value=1.7e+02 Score=27.06 Aligned_cols=91 Identities=15% Similarity=0.102 Sum_probs=56.0
Q ss_pred HHHHHHHHCCCC--CeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC--e-EEEe
Q 017440 232 AALLIRKLQSTY--PVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL--C-LVSY 306 (371)
Q Consensus 232 ~l~~l~~~~p~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl--~-v~~w 306 (371)
.++.+++..+.. .+.+.+... ......+.....|+ ++.+ .+..-+..++++|. . |..+
T Consensus 26 N~~~l~~~~~~~~~~i~~avKAn----------~~~~v~~~l~~~G~-g~~v------as~~E~~~~~~~G~~~~~Il~~ 88 (386)
T 2yxx_A 26 RSRLVKEVFEGVNLLPTFAVKAN----------NNPVLLKILREEGF-GMDV------VTKGELLAAKLAGVPSHTVVWN 88 (386)
T ss_dssp HHHHHHHHTTTSCEEEEEEGGGC----------CCHHHHHHHHHTTC-EEEE------CSHHHHHHHHHTTCCGGGEEEC
T ss_pred HHHHHHHhhccCCceEEEEEeeC----------CCHHHHHHHHHcCC-eEEE------cCHHHHHHHHHcCCChhhEEEe
Confidence 345566666543 444444332 22344555566776 5543 25666777888887 4 7766
Q ss_pred cccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 307 GELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 307 gtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
+...+++++..++ +.|+..+..|..+.+..+.+
T Consensus 89 ~~~k~~~~l~~a~-~~~v~~~~vds~~el~~l~~ 121 (386)
T 2yxx_A 89 GNGKSRDQMEHFL-REDVRIVNVDSFEEMEIWRE 121 (386)
T ss_dssp CSCCCHHHHHHHH-HTTCCEEEECCHHHHHHHHH
T ss_pred CCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHHH
Confidence 4445677777775 68886688888888876644
No 103
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=47.29 E-value=63 Score=31.46 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc------------ccCChHHHHHH
Q 017440 229 QPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA------------IFKNPGAIKKI 296 (371)
Q Consensus 229 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------~~~~~~~v~~~ 296 (371)
.++.++.+++..|++|+..-. . .+.+++ +.+...|+++|.+.... -..+...+..+
T Consensus 265 ~~e~i~~i~~~~p~~pvi~g~--~---------~t~e~a-~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v 332 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVAGN--V---------ATPEGT-EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMEC 332 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEEEE--E---------CSHHHH-HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEeCC--c---------CCHHHH-HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHH
Confidence 467788889888888875411 0 133443 55567899988763210 00122233333
Q ss_pred H----HhCCeEEEecccCChHHHHHHHHhcCceEEEeCChH
Q 017440 297 K----EAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVS 333 (371)
Q Consensus 297 ~----~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~ 333 (371)
. +.+++|.+-|-+.+..++.+++ .+|+|+|..=++-
T Consensus 333 ~~~~~~~~ipvia~GGI~~~~di~kal-a~GAd~V~iGr~~ 372 (494)
T 1vrd_A 333 SEVARKYDVPIIADGGIRYSGDIVKAL-AAGAESVMVGSIF 372 (494)
T ss_dssp HHHHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESHHH
T ss_pred HHHHhhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECHHH
Confidence 3 2479999988899999999987 7999999976654
No 104
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=47.17 E-value=10 Score=32.97 Aligned_cols=28 Identities=25% Similarity=0.179 Sum_probs=24.4
Q ss_pred cccchHHHHHHHHhCCCCEEEEEEeeecCCe
Q 017440 74 IKENTILSFNAAARHPLDFIEFDVQVTRDGC 104 (371)
Q Consensus 74 ~PENTl~Af~~A~~~Gad~IE~DV~lTkDG~ 104 (371)
.++++.+..+.+.+.|+|+||+|+ +||.
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~---~dg~ 48 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDV---MDGR 48 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEE---EBSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEee---ccCC
Confidence 478999999999999999999999 5554
No 105
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=47.08 E-value=70 Score=25.19 Aligned_cols=68 Identities=22% Similarity=0.158 Sum_probs=35.9
Q ss_pred HHHHHHHHHhCCCceEeccccc---ccCChHHHHHHHHhCC---eEEEecc-cC---ChHHHHHHHHhcCceEEEeCC
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRA---IFKNPGAIKKIKEAKL---CLVSYGE-LN---NVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~~~~~Gl---~v~~wgt-vn---~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.++.++.+...+++.+.+.... ...-+++++.++++|. +|++=|. +. +.++....+++.|+|+++.+-
T Consensus 43 ~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g 120 (137)
T 1ccw_A 43 QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPG 120 (137)
T ss_dssp HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTT
T ss_pred HHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCC
Confidence 3444555555555554443211 0012467888888875 4555443 22 122223334679999999764
No 106
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=46.10 E-value=62 Score=33.44 Aligned_cols=44 Identities=18% Similarity=0.130 Sum_probs=29.4
Q ss_pred cHHHHHHHHHhCCCceEecccccc-------------------cCC--hHHHHHHHHhCCeEEEe
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRAI-------------------FKN--PGAIKKIKEAKLCLVSY 306 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~~-------------------~~~--~~~v~~~~~~Gl~v~~w 306 (371)
.+.+.++.+++.|+..++++..+. +.+ ..+++++|++|+++.+|
T Consensus 351 ~v~~~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~GlW 415 (732)
T 2xn2_A 351 KLKTIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLW 415 (732)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEEcCcccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEEEEE
Confidence 455566666777777776652110 111 46899999999999999
No 107
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=45.76 E-value=1.4e+02 Score=25.39 Aligned_cols=142 Identities=13% Similarity=0.087 Sum_probs=79.8
Q ss_pred HHHHHHhcCCCceEEEEeccCCcccchhHHHHH--HHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcC
Q 017440 173 LQEAFEKVDQSVGFNVELKFDDQLVYTEEELTH--ALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTN 250 (371)
Q Consensus 173 L~evL~~~~~~~~l~iEiK~~~~~~~~~~~~~~--~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~ 250 (371)
..++++.++.++.+.+-.....+... . . ...++++.+.+.|.. -+.+. +++.++.+++.. ++|+.-+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~----~~~~~~~~a~~~~~~G~~-~i~~~--~~~~i~~i~~~~-~~p~i~~~~ 77 (234)
T 1yxy_A 7 KEKLMEQLKGGIIVSCQALPGEPLYS-E----TGGIMPLMAKAAQEAGAV-GIRAN--SVRDIKEIQAIT-DLPIIGIIK 77 (234)
T ss_dssp HHHHHHHHTTSCEEECCCCTTSTTCC-T----TCCSHHHHHHHHHHHTCS-EEEEE--SHHHHHHHHTTC-CSCEEEECB
T ss_pred HHHHHHHHhCCEEEEeeCCCCCCCcC-C----ccchHHHHHHHHHHCCCc-EeecC--CHHHHHHHHHhC-CCCEEeeEc
Confidence 45777777656666666555321110 1 1 234455555666644 23332 477888888764 577732221
Q ss_pred CCCcccCCCCcccHHHHHHHHHhCCCceEeccccccc-----CChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcC
Q 017440 251 GGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIF-----KNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMG 323 (371)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~G 323 (371)
.... ...+......+.++.+...|++.+.++..... ...+.++.+++. +..+.+ .+.+.++...+. +.|
T Consensus 78 ~~~~-~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~--~~~t~~ea~~a~-~~G 153 (234)
T 1yxy_A 78 KDYP-PQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA--DISTFDEGLVAH-QAG 153 (234)
T ss_dssp CCCT-TSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE--ECSSHHHHHHHH-HTT
T ss_pred CCCC-ccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEE--eCCCHHHHHHHH-HcC
Confidence 1100 00000011223456677889998887654321 114789999998 777665 366777777765 799
Q ss_pred ceEE
Q 017440 324 IEGV 327 (371)
Q Consensus 324 VdgI 327 (371)
+|.|
T Consensus 154 ad~i 157 (234)
T 1yxy_A 154 IDFV 157 (234)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 9988
No 108
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=45.72 E-value=59 Score=28.72 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=55.6
Q ss_pred ccHHHHHHHHHhCCCceEecccc------cccCChHHHHHHHHhC--CeEEEecccCChHHHHHHHHhcCceEEEe----
Q 017440 262 SSLDEAIKVCLAGGLQGIVSEVR------AIFKNPGAIKKIKEAK--LCLVSYGELNNVPEVVYMQRFMGIEGVIV---- 329 (371)
Q Consensus 262 ~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~v~~~~~~G--l~v~~wgtvn~~~~~~~l~~~~GVdgIiT---- 329 (371)
..+.+.++.+...|++.++.+.- .+...+..++.+++.. +.+-+.-.+++++.+.+.+.+.|+|+|+.
T Consensus 40 ~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea 119 (246)
T 3inp_A 40 ARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEA 119 (246)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGG
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEcccc
Confidence 35778888888889887776531 1234678999999886 55555434777777666556799998864
Q ss_pred -CChHHHHHHHHhh
Q 017440 330 -DLVSEITEAVSDF 342 (371)
Q Consensus 330 -D~p~~l~~~l~~~ 342 (371)
+.+....+.+++.
T Consensus 120 ~~~~~~~i~~ir~~ 133 (246)
T 3inp_A 120 SEHIDRSLQLIKSF 133 (246)
T ss_dssp CSCHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHc
Confidence 4555666666654
No 109
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=45.39 E-value=1.5e+02 Score=27.74 Aligned_cols=78 Identities=9% Similarity=0.129 Sum_probs=52.3
Q ss_pred HHHHHHHHHhCCCceEeccccccc--------------------C---ChHHHHHHHHh---CCeEEEecccCChHHHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIF--------------------K---NPGAIKKIKEA---KLCLVSYGELNNVPEVVY 317 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~--------------------~---~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~ 317 (371)
+.+..+.+...|++++.+.-...- + .-+.+..++++ .+.|..-|-+.+.+++.+
T Consensus 236 ~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~ 315 (367)
T 3zwt_A 236 KEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALE 315 (367)
T ss_dssp HHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHH
Confidence 445566667788888876522100 0 11567777776 588888878999999999
Q ss_pred HHHhcCceEEEe------CChHHHHHHHHhh
Q 017440 318 MQRFMGIEGVIV------DLVSEITEAVSDF 342 (371)
Q Consensus 318 l~~~~GVdgIiT------D~p~~l~~~l~~~ 342 (371)
++ ..|+|+|+. +.|..+.++.+..
T Consensus 316 ~l-~~GAd~V~vgra~l~~gP~~~~~i~~~l 345 (367)
T 3zwt_A 316 KI-RAGASLVQLYTALTFWGPPVVGKVKREL 345 (367)
T ss_dssp HH-HHTCSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HH-HcCCCEEEECHHHHhcCcHHHHHHHHHH
Confidence 87 589999984 4455555554443
No 110
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=45.36 E-value=58 Score=30.55 Aligned_cols=63 Identities=10% Similarity=0.139 Sum_probs=44.7
Q ss_pred HHHHHHHHhCCCceEeccccccc--CChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIF--KNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
.+.++.+.+.|++.|.++...-. .-.+.+++++++ ++.|.+= ++.+.+++..+. +.|+|+|..
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G-~V~T~e~A~~a~-~aGaD~I~V 168 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAG-NVATYAGADYLA-SCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEc-CcCCHHHHHHHH-HcCCCEEEE
Confidence 44566677778888776532210 012578889987 7888885 688888888885 799999985
No 111
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=45.21 E-value=1.3e+02 Score=26.81 Aligned_cols=41 Identities=20% Similarity=0.370 Sum_probs=31.5
Q ss_pred HHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCCh
Q 017440 291 GAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 291 ~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p 332 (371)
+.++.+++. +++|.+-|-+.+.+++.+++ ..|+|+|+.-++
T Consensus 231 ~~i~~i~~~~~ipvia~GGI~~~~d~~~~l-~~GAd~V~vg~~ 272 (311)
T 1ep3_A 231 KLIHQVAQDVDIPIIGMGGVANAQDVLEMY-MAGASAVAVGTA 272 (311)
T ss_dssp HHHHHHHTTCSSCEEECSSCCSHHHHHHHH-HHTCSEEEECTH
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECHH
Confidence 566666665 67888777788999998886 589999976543
No 112
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=45.20 E-value=73 Score=26.80 Aligned_cols=56 Identities=13% Similarity=0.080 Sum_probs=42.5
Q ss_pred HHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 267 AIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 267 ~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
.++.+...|+++++... .++++++.+++.|..+.+- +.+..++.... ..|+|.|..
T Consensus 72 ~i~~a~~~Gad~V~~~~----~~~~~~~~~~~~g~~~~~g--~~t~~e~~~a~-~~G~d~v~v 127 (212)
T 2v82_A 72 QVDALARMGCQLIVTPN----IHSEVIRRAVGYGMTVCPG--CATATEAFTAL-EAGAQALKI 127 (212)
T ss_dssp HHHHHHHTTCCEEECSS----CCHHHHHHHHHTTCEEECE--ECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHcCCCEEEeCC----CCHHHHHHHHHcCCCEEee--cCCHHHHHHHH-HCCCCEEEE
Confidence 35677888999998543 2578899999999886542 56777777664 699999986
No 113
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=45.02 E-value=38 Score=28.89 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=39.8
Q ss_pred HHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 269 KVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 269 ~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.+...|+++++++... ...+.++.+.. |+.+.+ ++++.++..... ..|+|.|..+.
T Consensus 82 ~~a~~~gad~v~l~~~~--~~~~~~~~~~~-~~~ig~--sv~t~~~~~~a~-~~gaD~i~~~~ 138 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGS--FSPKQIRARFP-HLHIGR--SVHSLEEAVQAE-KEDADYVLFGH 138 (221)
T ss_dssp HHHHTTTCCEEEECTTS--CCHHHHHHHCT-TCEEEE--EECSHHHHHHHH-HTTCSEEEEEC
T ss_pred HHHHHcCCCEEEeCCCc--cCHHHHHHHCC-CCEEEE--EcCCHHHHHHHH-hCCCCEEEECC
Confidence 45677899999887543 24555655553 776654 577888877775 69999998865
No 114
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=44.96 E-value=73 Score=27.60 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=47.7
Q ss_pred HHHHHHHHHhCCCceEecccc-----cccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC-----h
Q 017440 264 LDEAIKVCLAGGLQGIVSEVR-----AIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL-----V 332 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~-----p 332 (371)
..+..+.+...|++.+++... ....+.++++.++++ +++|.+=|-+++.+++..++ +.|+|+|+... |
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l-~~Gad~V~ig~~~l~dp 115 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LRGADKVSINTAAVENP 115 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HTTCSEECCSHHHHHCT
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH-HcCCCeeehhhHHhhCh
Confidence 344445555667666653211 011234677776654 67777666788888888886 68999988654 5
Q ss_pred HHHHHHHHhh
Q 017440 333 SEITEAVSDF 342 (371)
Q Consensus 333 ~~l~~~l~~~ 342 (371)
..+.++.+.+
T Consensus 116 ~~~~~~~~~~ 125 (247)
T 3tdn_A 116 SLITQIAQTF 125 (247)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5566665544
No 115
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=44.95 E-value=97 Score=27.90 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=36.9
Q ss_pred HHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEeC------ChHHHHHHHHh
Q 017440 291 GAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD------LVSEITEAVSD 341 (371)
Q Consensus 291 ~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD------~p~~l~~~l~~ 341 (371)
+.++.++++ +++|.+=|-+.+.+++.+++ ..|+|+|..= .|..+.++.+.
T Consensus 233 ~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l-~~GAd~V~ig~~~l~~~p~~~~~i~~~ 290 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGCGGVYSGEDAFLHI-LAGASMVQVGTALQEEGPGIFTRLEDE 290 (314)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HHTCSSEEECHHHHHHCTTHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEECCCCCHHHHHHHH-HcCCCEEEEchhhHhcCcHHHHHHHHH
Confidence 567777765 68888877899999999987 6899999764 45555555443
No 116
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=44.87 E-value=2e+02 Score=26.81 Aligned_cols=96 Identities=15% Similarity=0.222 Sum_probs=64.5
Q ss_pred ecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc------ccCChHHHHHHHHh
Q 017440 226 SSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA------IFKNPGAIKKIKEA 299 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~v~~~~~~ 299 (371)
.+++++.++.+++.. +.|+..-.- .+.+. .+.+...|+++|.+.... ...+-+.+.++.++
T Consensus 202 ~~~~w~~i~~lr~~~-~~PvivK~v-----------~~~e~-A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~a 268 (352)
T 3sgz_A 202 ASFCWNDLSLLQSIT-RLPIILKGI-----------LTKED-AELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAA 268 (352)
T ss_dssp TTCCHHHHHHHHHHC-CSCEEEEEE-----------CSHHH-HHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhc-CCCEEEEec-----------CcHHH-HHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHH
Confidence 357889999999875 567654221 12333 456778899998764211 11122445444332
Q ss_pred ---CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHH
Q 017440 300 ---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEI 335 (371)
Q Consensus 300 ---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l 335 (371)
.++|++=|-+.+..++.+++ .+|+|+|..-+|-..
T Consensus 269 v~~~ipVia~GGI~~g~Dv~kaL-alGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 269 VKGKIEVYMDGGVRTGTDVLKAL-ALGARCIFLGRPILW 306 (352)
T ss_dssp HTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHH
T ss_pred hCCCCeEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHH
Confidence 58888888899999998887 699999999988664
No 117
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=44.78 E-value=65 Score=27.67 Aligned_cols=78 Identities=10% Similarity=0.090 Sum_probs=47.6
Q ss_pred cHHHHHHHHHhCCCceEecccc------cccCChHHHHHHHHhC-Ce--EEEecccCChHHHHHHHHhcCceEE-----E
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVR------AIFKNPGAIKKIKEAK-LC--LVSYGELNNVPEVVYMQRFMGIEGV-----I 328 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~v~~~~~~G-l~--v~~wgtvn~~~~~~~l~~~~GVdgI-----i 328 (371)
.+.+.++.+...|++.+++..- .....++.++.+++.- .. |+.. +|+++.......+.|+|+| .
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lm--v~d~~~~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLM--VTNPSDYVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEE--SSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEE--ecCHHHHHHHHHHcCCCEEEECCCC
Confidence 5667778888888887765521 1123468888888753 33 3454 5776554444446899999 4
Q ss_pred eCCh-HHHHHHHHhh
Q 017440 329 VDLV-SEITEAVSDF 342 (371)
Q Consensus 329 TD~p-~~l~~~l~~~ 342 (371)
++.+ ....+.+++.
T Consensus 98 ~~~~~~~~~~~i~~~ 112 (228)
T 1h1y_A 98 SRDNWQELIQSIKAK 112 (228)
T ss_dssp CTTTHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHc
Confidence 4555 5555555443
No 118
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=44.69 E-value=89 Score=27.95 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=26.0
Q ss_pred hHHHHHHHHh-CCeEEEe--cccCChHHHHHHHHhcCceEEEe
Q 017440 290 PGAIKKIKEA-KLCLVSY--GELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 290 ~~~v~~~~~~-Gl~v~~w--gtvn~~~~~~~l~~~~GVdgIiT 329 (371)
.+.++.+++. ++.|.+= ..+.+..++.+.+.+.|+|+|+.
T Consensus 153 ~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 153 AALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 4677888887 8877652 02345555444445799999986
No 119
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=44.22 E-value=75 Score=28.55 Aligned_cols=55 Identities=11% Similarity=0.123 Sum_probs=34.7
Q ss_pred hHHHHHHHHhCCeEEEe-cc--------cCChHHHHHHHH---hcCceEEEe------CChHHHHHHHHhhhc
Q 017440 290 PGAIKKIKEAKLCLVSY-GE--------LNNVPEVVYMQR---FMGIEGVIV------DLVSEITEAVSDFIK 344 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~w-gt--------vn~~~~~~~l~~---~~GVdgIiT------D~p~~l~~~l~~~~~ 344 (371)
.+.++.++++|+.|.++ ++ -.+++...++.. +.|+|.|.- =.|....++++...+
T Consensus 123 ~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 123 SPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLA 195 (295)
T ss_dssp HHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHH
Confidence 45688899999988521 01 124555555443 689988742 258888777776644
No 120
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=44.01 E-value=1.5e+02 Score=25.34 Aligned_cols=76 Identities=14% Similarity=0.231 Sum_probs=55.0
Q ss_pred HHHHHHHHHhCCCceEeccccc--ccCChHHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRA--IFKNPGAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEA 338 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~ 338 (371)
+..+.+.+...|+++|..+... --.+.+.++.+++. .++|.+-|-+.+.+++.+++ ..|+|.|=+-....+.+-
T Consensus 134 ~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l-~aGA~~iG~s~~~~i~~~ 212 (225)
T 1mzh_A 134 IKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMI-EAGADRIGTSSGISIAEE 212 (225)
T ss_dssp HHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHH-HhCchHHHHccHHHHHHH
Confidence 4556667778899998765421 11256778888775 58998888899999999987 699998888877665544
Q ss_pred HH
Q 017440 339 VS 340 (371)
Q Consensus 339 l~ 340 (371)
++
T Consensus 213 ~~ 214 (225)
T 1mzh_A 213 FL 214 (225)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 121
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=43.95 E-value=1.1e+02 Score=23.50 Aligned_cols=79 Identities=11% Similarity=0.117 Sum_probs=45.9
Q ss_pred HHHHHHHHHhCCCceEecccccccC-ChHHHHHHHHh--CCeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEA--KLCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEITE 337 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~--Gl~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l~~ 337 (371)
..++++.+.....+.+.++....-. .-++++.+++. +..+.+. +- .+.+....++ ..|++++++- .+..+.+
T Consensus 40 ~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~L~~ 117 (153)
T 3cz5_A 40 AGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIF-TMHQGSAFALKAF-EAGASGYVTKSSDPAELVQ 117 (153)
T ss_dssp HHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEE-ESCCSHHHHHHHH-HTTCSEEEETTSCTTHHHH
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEE-ECCCCHHHHHHHH-HCCCcEEEecCCCHHHHHH
Confidence 4455555555555655555432111 13567777775 4667776 44 3444455554 6999998876 3566777
Q ss_pred HHHhhhc
Q 017440 338 AVSDFIK 344 (371)
Q Consensus 338 ~l~~~~~ 344 (371)
.++....
T Consensus 118 ~i~~~~~ 124 (153)
T 3cz5_A 118 AIEAILA 124 (153)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 7666544
No 122
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=43.87 E-value=1.4e+02 Score=25.01 Aligned_cols=40 Identities=10% Similarity=0.110 Sum_probs=30.4
Q ss_pred HHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 291 GAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 291 ~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.++++++. +++|.+=|-+.+.+.+.+++ +.|+|+++.=.
T Consensus 165 ~~~~~~~~~~~ipvia~GGI~~~~~~~~~~-~~Gad~v~vG~ 205 (223)
T 1y0e_A 165 QFLKDVLQSVDAKVIAEGNVITPDMYKRVM-DLGVHCSVVGG 205 (223)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHHHhhCCCCEEEecCCCCHHHHHHHH-HcCCCEEEECh
Confidence 355565554 78888877788889998886 68999998753
No 123
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=43.08 E-value=1e+02 Score=23.13 Aligned_cols=52 Identities=10% Similarity=0.216 Sum_probs=31.8
Q ss_pred HHHHHHHHh--CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhc
Q 017440 291 GAIKKIKEA--KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~~--Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~ 344 (371)
++++.+++. ..++.+. +-. +.+...+++ ..|++++++- .+..+.+.++...+
T Consensus 66 ~~~~~l~~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 66 DILREIKKITPHMAVIIL-TGHGDLDNAILAM-KEGAFEYLRKPVTAQDLSIAINNAIN 122 (143)
T ss_dssp HHHHHHHHHCTTCEEEEE-ECTTCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEE-ECCCCHHHHHHHH-HhCcceeEeCCCCHHHHHHHHHHHHH
Confidence 466666665 4677777 443 444455554 6999998875 34555555555443
No 124
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=42.64 E-value=95 Score=27.92 Aligned_cols=50 Identities=4% Similarity=0.127 Sum_probs=36.5
Q ss_pred HHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEeC------ChHHHHHHHHh
Q 017440 291 GAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD------LVSEITEAVSD 341 (371)
Q Consensus 291 ~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD------~p~~l~~~l~~ 341 (371)
+.++.++++ .++|.+=|-+.+.+++.+++ ..|+|+|+.= .|..+.++.+.
T Consensus 230 ~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l-~~GAd~V~vg~~~l~~~p~~~~~i~~~ 288 (311)
T 1jub_A 230 ANVRAFYTRLKPEIQIIGTGGIETGQDAFEHL-LCGATMLQIGTALHKEGPAIFDRIIKE 288 (311)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEECCCCCHHHHHHHH-HcCCCEEEEchHHHhcCcHHHHHHHHH
Confidence 466777665 58888777899999999987 6899999764 45555555443
No 125
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=42.54 E-value=1.3e+02 Score=28.97 Aligned_cols=90 Identities=17% Similarity=0.120 Sum_probs=56.4
Q ss_pred HHHHHHHC-CCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC---eEEEecc
Q 017440 233 ALLIRKLQ-STYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL---CLVSYGE 308 (371)
Q Consensus 233 l~~l~~~~-p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl---~v~~wgt 308 (371)
++.+++.. ++..+.+.+... .....++.....|+ ++.+ .+..-+..+.++|+ .+...|.
T Consensus 56 ~~~l~~~~~~~~~i~~avKan----------~~~~v~~~l~~~G~-g~~v------as~~E~~~~~~~G~~~~~I~~~g~ 118 (467)
T 2o0t_A 56 CRETAAAFGSGANVHYAAKAF----------LCSEVARWISEEGL-CLDV------CTGGELAVALHASFPPERITLHGN 118 (467)
T ss_dssp HHHHHHHTSSGGGBEEEGGGC----------CCHHHHHHHHHHTC-EEEE------CSHHHHHHHHHTTCCGGGEEECCT
T ss_pred HHHHHHhcCCCcEEEEEeccC----------CCHHHHHHHHHcCC-eEEE------eCHHHHHHHHHcCCCcccEEEeCC
Confidence 34445544 445555555432 22344455556676 5432 25667788888887 3666644
Q ss_pred cCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 309 LNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 309 vn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
..+.+++..++ +.|++.+..|..+.+.++-+
T Consensus 119 ~k~~~~i~~a~-~~gv~~i~vds~~el~~l~~ 149 (467)
T 2o0t_A 119 NKSVSELTAAV-KAGVGHIVVDSMTEIERLDA 149 (467)
T ss_dssp TCCHHHHHHHH-HHTCSEEEECSHHHHHHHHH
T ss_pred CCCHHHHHHHH-HCCCCEEEECCHHHHHHHHH
Confidence 45667787775 68998899999998887643
No 126
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=42.11 E-value=30 Score=30.96 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=28.5
Q ss_pred HHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 292 AIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 292 ~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
..+.+.+.|+.|+.| +.+|+...+++. ++|++.|+.
T Consensus 127 aa~~L~~~Gf~Vlpy-~~dd~~~akrl~-~~G~~aVmP 162 (265)
T 1wv2_A 127 AAEQLVKDGFDVMVY-TSDDPIIARQLA-EIGCIAVMP 162 (265)
T ss_dssp HHHHHHTTTCEEEEE-ECSCHHHHHHHH-HSCCSEEEE
T ss_pred HHHHHHHCCCEEEEE-eCCCHHHHHHHH-HhCCCEEEe
Confidence 445555559999999 899988888875 799998876
No 127
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=41.88 E-value=57 Score=28.35 Aligned_cols=81 Identities=9% Similarity=0.039 Sum_probs=52.0
Q ss_pred ccHHHHHHHHHhCCCceEecccc------cccCChHHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEe---
Q 017440 262 SSLDEAIKVCLAGGLQGIVSEVR------AIFKNPGAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIV--- 329 (371)
Q Consensus 262 ~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT--- 329 (371)
..+.+.++.+...|++.++.+.- .+...+..++.+++. .+.+-+.--+++++.+.+.+.+.|+|+|+.
T Consensus 17 ~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~E 96 (228)
T 3ovp_A 17 ANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE 96 (228)
T ss_dssp GGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGG
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccC
Confidence 35778888888889888776421 123468899999988 344433223677766555555799998875
Q ss_pred --CChHHHHHHHHhh
Q 017440 330 --DLVSEITEAVSDF 342 (371)
Q Consensus 330 --D~p~~l~~~l~~~ 342 (371)
+.+....+.+++.
T Consensus 97 a~~~~~~~i~~i~~~ 111 (228)
T 3ovp_A 97 ATENPGALIKDIREN 111 (228)
T ss_dssp GCSCHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHc
Confidence 3444555555554
No 128
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=41.73 E-value=1.2e+02 Score=26.99 Aligned_cols=73 Identities=11% Similarity=0.105 Sum_probs=45.6
Q ss_pred HHHhCCCceEeccccc---ccCChHHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEe-------CChHHHH
Q 017440 270 VCLAGGLQGIVSEVRA---IFKNPGAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIV-------DLVSEIT 336 (371)
Q Consensus 270 ~~~~~~~~~v~~~~~~---~~~~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT-------D~p~~l~ 336 (371)
.+...|++.+.+.... .-.+.+.+..+.+. ++.+.+=|-++++++..++. ..|+||++. ++|....
T Consensus 177 ~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~-~~GadgvlVGsal~~a~dp~~~~ 255 (272)
T 3qja_A 177 RALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYA-GAGADAVLVGEGLVTSGDPRAAV 255 (272)
T ss_dssp HHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHH-HTTCSEEEECHHHHTCSCHHHHH
T ss_pred HHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHhCCCCHHHHH
Confidence 3445566655544221 11233445555443 67777665689999998885 799999987 6777766
Q ss_pred HHHHhhh
Q 017440 337 EAVSDFI 343 (371)
Q Consensus 337 ~~l~~~~ 343 (371)
+.+.+..
T Consensus 256 ~~l~~~~ 262 (272)
T 3qja_A 256 ADLVTAG 262 (272)
T ss_dssp HHHHTTT
T ss_pred HHHHhhh
Confidence 5555443
No 129
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus} PDB: 2plk_A*
Probab=41.23 E-value=1.1e+02 Score=28.96 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=24.2
Q ss_pred ChHHHHHHHHhCC---eEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHH
Q 017440 289 NPGAIKKIKEAKL---CLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEA 338 (371)
Q Consensus 289 ~~~~v~~~~~~Gl---~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~ 338 (371)
+..-+..++++|+ .+...+...+++++..++ +.|+..+..|..+.+..+
T Consensus 108 s~~E~~~~r~~G~~~~~Il~~g~~k~~~~l~~a~-~~~v~~~~vds~~el~~l 159 (419)
T 2plj_A 108 TTGEVELVASEGVPADLTIHTHPIKRDADIRDAL-AYGCNVFVVDNLNELEKF 159 (419)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHH-HHTCCEEEECSHHHHHTT
T ss_pred CHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHH
Confidence 3444555555664 243332233445555543 456555566666555543
No 130
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=40.85 E-value=13 Score=33.55 Aligned_cols=49 Identities=10% Similarity=0.031 Sum_probs=33.1
Q ss_pred hHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHHh
Q 017440 290 PGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSD 341 (371)
Q Consensus 290 ~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~ 341 (371)
.++++++++. .++|.+=+-++++++..+.+ ..|+||++.=. .+.+.+.+
T Consensus 195 ~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~-~~gADgvVVGS--aiv~~i~~ 244 (267)
T 3vnd_A 195 ENILTQLAEFNAPPPLLGFGIAEPEQVRAAI-KAGAAGAISGS--AVVKIIEA 244 (267)
T ss_dssp HHHHHHHHTTTCCCEEECSSCCSHHHHHHHH-HTTCSEEEECH--HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECH--HHHHHHHH
Confidence 4677777776 46666544588888887564 68999999874 33444443
No 131
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=40.77 E-value=62 Score=31.65 Aligned_cols=90 Identities=8% Similarity=0.098 Sum_probs=57.3
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc-----------c-cCC----hHHH
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA-----------I-FKN----PGAI 293 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----------~-~~~----~~~v 293 (371)
.+.++.+++..|++|+..-.- .+.+. .+.+...|++++.+.+.. . ..+ .+..
T Consensus 258 ~~~v~~i~~~~p~~~Vi~g~v-----------~t~e~-a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~ 325 (490)
T 4avf_A 258 IERVRWVKQTFPDVQVIGGNI-----------ATAEA-AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVA 325 (490)
T ss_dssp HHHHHHHHHHCTTSEEEEEEE-----------CSHHH-HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCceEEEeee-----------CcHHH-HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHH
Confidence 367888888888877654210 12333 455677899988752100 0 011 1233
Q ss_pred HHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCCh
Q 017440 294 KKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 294 ~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p 332 (371)
+.+++.+++|.+=|-+.+..++.+++ .+|+|+|+.-..
T Consensus 326 ~~~~~~~iPVIa~GGI~~~~di~kal-~~GAd~V~vGs~ 363 (490)
T 4avf_A 326 AALEGTGVPLIADGGIRFSGDLAKAM-VAGAYCVMMGSM 363 (490)
T ss_dssp HHHTTTTCCEEEESCCCSHHHHHHHH-HHTCSEEEECTT
T ss_pred HHhccCCCcEEEeCCCCCHHHHHHHH-HcCCCeeeecHH
Confidence 33334589999887788899998886 689999987654
No 132
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=40.60 E-value=1.2e+02 Score=26.74 Aligned_cols=71 Identities=13% Similarity=0.141 Sum_probs=39.7
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEE
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVS 305 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~ 305 (371)
.+.++.+|+..+++|+.++.... ..........++.+...|++++..+....--..++++.++++|+.+..
T Consensus 82 ~~~v~~ir~~~~~~Pv~lm~y~n-----~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 82 FEMLAIIREKHPTIPIGLLMYAN-----LVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIF 152 (268)
T ss_dssp HHHHHHHHHHCSSSCEEEEECHH-----HHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHhcCCCCCEEEEEccc-----HHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEE
Confidence 34566666654566765543110 000113455666677778887765532221235678888888887544
No 133
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=39.95 E-value=1.4e+02 Score=27.88 Aligned_cols=41 Identities=7% Similarity=0.115 Sum_probs=31.5
Q ss_pred ChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 289 NPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 289 ~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+-+.++++++. +++|.+= .+.+.+++..+. +.|+|+|+...
T Consensus 205 ~w~~i~~lr~~~~~PvivK-~v~~~e~A~~a~-~~GaD~I~vsn 246 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILK-GILTKEDAELAM-KHNVQGIVVSN 246 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEE-EECSHHHHHHHH-HTTCSEEEECC
T ss_pred CHHHHHHHHHhcCCCEEEE-ecCcHHHHHHHH-HcCCCEEEEeC
Confidence 44678888877 7888776 467778877775 79999998754
No 134
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=39.67 E-value=2.2e+02 Score=26.44 Aligned_cols=95 Identities=13% Similarity=0.222 Sum_probs=63.3
Q ss_pred cCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc------ccCChHHHHHHHHh-
Q 017440 227 SFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA------IFKNPGAIKKIKEA- 299 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~v~~~~~~- 299 (371)
.++++.++.+++.. +.|+..-.. .+.+ ..+.+...|+++|.+.... ...+-+.+..+++.
T Consensus 211 ~~~~~~i~~l~~~~-~~pv~vK~~-----------~~~e-~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~ 277 (370)
T 1gox_A 211 SLSWKDVAWLQTIT-SLPILVKGV-----------ITAE-DARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAA 277 (370)
T ss_dssp TCCHHHHHHHHHHC-CSCEEEECC-----------CSHH-HHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHh-CCCEEEEec-----------CCHH-HHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHh
Confidence 46778888888875 567664111 1222 3456778899988763211 11223456666663
Q ss_pred --CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHH
Q 017440 300 --KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEI 335 (371)
Q Consensus 300 --Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l 335 (371)
.+.|++=|-+.+..++.+++ .+|+|+|..=+|-..
T Consensus 278 ~~~ipvia~GGI~~~~D~~k~l-~~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 278 QGRIPVFLDGGVRRGTDVFKAL-ALGAAGVFIGRPVVF 314 (370)
T ss_dssp TTSSCEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHH-HcCCCEEeecHHHHH
Confidence 57888877799999998887 699999999987654
No 135
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=39.60 E-value=97 Score=27.66 Aligned_cols=69 Identities=19% Similarity=0.227 Sum_probs=43.3
Q ss_pred HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEE
Q 017440 231 DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVS 305 (371)
Q Consensus 231 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~ 305 (371)
+.++.+|+. +++|++++.+.. .+........++.+...|++|+....-..--..++++.++++|+....
T Consensus 81 ~~v~~ir~~-~~~Pii~m~y~n-----~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 81 ELVREVRAL-TEKPLFLMTYLN-----PVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp HHHHHHHHH-CCSCEEEECCHH-----HHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHhc-CCCCEEEEecCc-----HHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEE
Confidence 567788877 788988864211 011123456677788889997665422111246788999999987443
No 136
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=39.49 E-value=2.4e+02 Score=26.33 Aligned_cols=89 Identities=16% Similarity=0.000 Sum_probs=51.2
Q ss_pred HHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC---eEEEeccc
Q 017440 233 ALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL---CLVSYGEL 309 (371)
Q Consensus 233 l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl---~v~~wgtv 309 (371)
++.+++..++..+.+.+... ......+.+...|+ ++.. .+..-+..++++|. .+...+..
T Consensus 48 ~~~l~~~~~~~~l~~vvKan----------~~~~v~~~l~~~G~-~~~v------as~~E~~~~~~~G~~~~~Il~~g~~ 110 (420)
T 2p3e_A 48 FEAYRKAFPDALICYAVKAN----------FNPHLVKLLGELGA-GADI------VSGGELYLAKKAGIPPERIVYAGVG 110 (420)
T ss_dssp HHHHHHHSTTSEEEEEGGGC----------CCHHHHHHHHHTTC-EEEE------SSHHHHHHHHHTTCCGGGEEECSSC
T ss_pred HHHHHHhCCcCeEEEEEecC----------CCHHHHHHHHHcCC-eEEE------eCHHHHHHHHHcCCChhHEEEeCCC
Confidence 34455656655555544332 22334455556666 5442 24556667777787 35555333
Q ss_pred CChHHHHHHHHhcCceEEEeCChHHHHHHH
Q 017440 310 NNVPEVVYMQRFMGIEGVIVDLVSEITEAV 339 (371)
Q Consensus 310 n~~~~~~~l~~~~GVdgIiTD~p~~l~~~l 339 (371)
..++++..++ +.|+..+..|.++.+..+-
T Consensus 111 ~~~~~l~~a~-~~~i~~~~vds~~~l~~l~ 139 (420)
T 2p3e_A 111 KTEKELTDAV-DSEILMFNVESRQELDVLN 139 (420)
T ss_dssp CCHHHHHHHH-HTTCSEEEECCHHHHHHHH
T ss_pred CCHHHHHHHH-HcCCCEEEeCCHHHHHHHH
Confidence 4566676665 5787767788887777653
No 137
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=39.11 E-value=1.3e+02 Score=25.86 Aligned_cols=99 Identities=13% Similarity=-0.025 Sum_probs=56.8
Q ss_pred ecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccccc-CChHHHHHHHHhC---C
Q 017440 226 SSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIF-KNPGAIKKIKEAK---L 301 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~~~G---l 301 (371)
.+|-+..++.+++..|+.++++-..- .|. .....+.+...|++.+.++...-. .-.+.++.+++.| .
T Consensus 42 ~~~G~~~v~~l~~~~p~~~iflDlKl-----~Di----p~t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~ 112 (221)
T 3exr_A 42 LQVGSELVEVLRSLFPDKIIVADTKC-----ADA----GGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKG 112 (221)
T ss_dssp HHHCTHHHHHHHHHCTTSEEEEEEEE-----CSC----HHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTC
T ss_pred HhcCHHHHHHHHHhCCCCcEEEEEEe-----ecc----HHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcc
Confidence 46778889999998888777653211 122 111223356789999877654210 0123556667777 5
Q ss_pred eEEEec-ccCChHHHHHHHHhcCceEEEeCChHH
Q 017440 302 CLVSYG-ELNNVPEVVYMQRFMGIEGVIVDLVSE 334 (371)
Q Consensus 302 ~v~~wg-tvn~~~~~~~l~~~~GVdgIiTD~p~~ 334 (371)
.+.+-- |.-+.+.+..++ ..|++-++......
T Consensus 113 ~~~Vt~lts~~~~~~~~~~-~~~~~~~v~~~a~~ 145 (221)
T 3exr_A 113 EIQVELYGDWTYDQAQQWL-DAGISQAIYHQSRD 145 (221)
T ss_dssp EEEEECCSSCCHHHHHHHH-HTTCCEEEEECCHH
T ss_pred eEEEEEcCCCCHHHHHHHH-cCCHHHHHHHHHHh
Confidence 555530 222455555554 57888777755443
No 138
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=39.01 E-value=88 Score=26.99 Aligned_cols=76 Identities=17% Similarity=0.145 Sum_probs=46.5
Q ss_pred HHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC-----hHH
Q 017440 266 EAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL-----VSE 334 (371)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~-----p~~ 334 (371)
+..+.+...|++.+++.... .....+.++.+++. ++++.+-|-+++++++..++ +.|+|+|+... |..
T Consensus 34 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~-~~Gad~V~lg~~~l~~p~~ 112 (253)
T 1thf_D 34 ELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELI-LRGADKVSINTAAVENPSL 112 (253)
T ss_dssp HHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHHCTHH
T ss_pred HHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH-HcCCCEEEEChHHHhChHH
Confidence 33344455666655433110 00123455666654 68888877788888888886 68999998754 555
Q ss_pred HHHHHHhh
Q 017440 335 ITEAVSDF 342 (371)
Q Consensus 335 l~~~l~~~ 342 (371)
+.++++.+
T Consensus 113 ~~~~~~~~ 120 (253)
T 1thf_D 113 ITQIAQTF 120 (253)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66666554
No 139
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=38.96 E-value=1.9e+02 Score=29.99 Aligned_cols=90 Identities=10% Similarity=0.154 Sum_probs=49.8
Q ss_pred cHHHHHHHHHhCCCceEeccccc---ccCChHHHHHHHHhCC---eEEEecccCChHHHHHHHHhcCceEEEe---CChH
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRA---IFKNPGAIKKIKEAKL---CLVSYGELNNVPEVVYMQRFMGIEGVIV---DLVS 333 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~~~~~Gl---~v~~wgtvn~~~~~~~l~~~~GVdgIiT---D~p~ 333 (371)
+.++.++.+...+++.|.+..-. ...-+++++.++++|+ .|++=|.+-. .+...+ ++.|+|+++. |-.+
T Consensus 643 ~~eeiv~aA~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG~~P~-~d~~~l-~~~GaD~~f~pgtd~~e 720 (762)
T 2xij_A 643 TPREVAQQAVDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPP-QDYEFL-FEVGVSNVFGPGTRIPK 720 (762)
T ss_dssp CHHHHHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCG-GGHHHH-HHHTCCEEECTTCCHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCc-ccHHHH-HhCCCCEEeCCCCCHHH
Confidence 46778888889998877765321 1123678999999997 5555542211 223334 4789999998 5554
Q ss_pred HHHHHHH---hhhccchhhhhhhh
Q 017440 334 EITEAVS---DFIKNEEEIKEEIV 354 (371)
Q Consensus 334 ~l~~~l~---~~~~~~~~~~~~~~ 354 (371)
.+..+++ +....+..+..|-+
T Consensus 721 ~~~~i~~~l~~~~~~~~~~~~~~~ 744 (762)
T 2xij_A 721 AAVQVLDDIEKCLEKKQQSVAENL 744 (762)
T ss_dssp HHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhh
Confidence 4443333 33344555555544
No 140
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=38.85 E-value=74 Score=25.09 Aligned_cols=53 Identities=9% Similarity=-0.016 Sum_probs=38.8
Q ss_pred hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe---CChHHHHHHHHhhh
Q 017440 290 PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV---DLVSEITEAVSDFI 343 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT---D~p~~l~~~l~~~~ 343 (371)
...++.++++|+++.+- |-+........+..+|++.++. +.|..+..+++++.
T Consensus 37 ~~~l~~l~~~g~~~~i~-T~~~~~~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~~ 92 (164)
T 3e8m_A 37 SAGIFWAHNKGIPVGIL-TGEKTEIVRRRAEKLKVDYLFQGVVDKLSAAEELCNELG 92 (164)
T ss_dssp HHHHHHHHHTTCCEEEE-CSSCCHHHHHHHHHTTCSEEECSCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEEE-eCCChHHHHHHHHHcCCCEeecccCChHHHHHHHHHHcC
Confidence 34689999999999888 7666666666666789887776 35666677776653
No 141
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=38.50 E-value=73 Score=27.46 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=36.8
Q ss_pred ChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC-----ChHHHHHHHHhh
Q 017440 289 NPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD-----LVSEITEAVSDF 342 (371)
Q Consensus 289 ~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD-----~p~~l~~~l~~~ 342 (371)
+.+.++.+++.++++.+-|-+++.+++..++ +.|+|+|+.. +|+.+.++ +.+
T Consensus 62 ~~~~i~~i~~~~ipvi~~Ggi~~~~~~~~~~-~~Gad~V~lg~~~l~~p~~~~~~-~~~ 118 (241)
T 1qo2_A 62 NLPVLEKLSEFAEHIQIGGGIRSLDYAEKLR-KLGYRRQIVSSKVLEDPSFLKSL-REI 118 (241)
T ss_dssp THHHHHHGGGGGGGEEEESSCCSHHHHHHHH-HTTCCEEEECHHHHHCTTHHHHH-HTT
T ss_pred hHHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HCCCCEEEECchHhhChHHHHHH-HHc
Confidence 3455666553478888877788888888876 6899999884 45556666 554
No 142
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=38.48 E-value=79 Score=29.66 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=27.9
Q ss_pred HhCCeEEEecccCChHHHHHHHHhcCceEEEeCCh
Q 017440 298 EAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 298 ~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p 332 (371)
+.+++|.+-|-+.+..++.+++ .+|+|+|+.-..
T Consensus 209 ~~~iPVIA~GGI~~~~di~kal-a~GAd~V~vGs~ 242 (366)
T 4fo4_A 209 EYGIPVIADGGIRFSGDISKAI-AAGASCVMVGSM 242 (366)
T ss_dssp GGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred hcCCeEEEeCCCCCHHHHHHHH-HcCCCEEEEChH
Confidence 4589999987788888888886 699999986543
No 143
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=38.32 E-value=83 Score=30.80 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=46.3
Q ss_pred HHHHHHHHHhCCCceEeccccccc--CChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIF--KNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
..+.++.+...|++.+.++...-. ...+.++.+++. ++.|.+- ++.+.+++..+. +.|+|+|..
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~-~v~t~~~a~~l~-~aGad~I~v 323 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGG-NVVTAAQAKNLI-DAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHH-HHTCSEEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEec-ccchHHHHHHHH-HcCCCEEEE
Confidence 344455667789999887543210 123779999999 8999876 688888888875 799999966
No 144
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=38.27 E-value=1.2e+02 Score=22.62 Aligned_cols=53 Identities=11% Similarity=0.082 Sum_probs=35.0
Q ss_pred HHHHHHHH----hCCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhcc
Q 017440 291 GAIKKIKE----AKLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIKN 345 (371)
Q Consensus 291 ~~v~~~~~----~Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~~ 345 (371)
++++.+++ .+.+|.+. |-. +.+...+++ ..|++++++- .+..+.+.++...+.
T Consensus 68 ~~~~~l~~~~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 68 EVLSAIRNNSRTANTPVIIA-TKSDNPGYRHAAL-KFKVSDYILKPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp HHHHHHHHSGGGTTCCEEEE-ESCCCHHHHHHHH-HSCCSEEEESSCCTTHHHHHHHHHHCC
T ss_pred HHHHHHHhCcccCCCCEEEE-eCCCCHHHHHHHH-HcCCCEEEECCCCHHHHHHHHHHHHHh
Confidence 56677776 35677777 443 445555554 6999999875 567777777765543
No 145
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=38.17 E-value=59 Score=28.48 Aligned_cols=51 Identities=12% Similarity=0.238 Sum_probs=36.4
Q ss_pred ChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC--------ChHHHHHHHH
Q 017440 289 NPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD--------LVSEITEAVS 340 (371)
Q Consensus 289 ~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD--------~p~~l~~~l~ 340 (371)
+.+.++.+.+. ++++.+-|-+++.+++..++ +.|+|+++.. .|..+.++++
T Consensus 62 ~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~-~~Gad~v~lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 62 DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADKALAASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CHHHHHHHGGGCCSCEEEESCCCSTHHHHHHH-HHTCSEEECCCCC------CHHHHHHCC
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCcHhhhhHHHHhCCCCHHHHHHHHH
Confidence 35667777654 78888776788888888886 6899999875 4555666543
No 146
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=37.85 E-value=81 Score=30.56 Aligned_cols=136 Identities=9% Similarity=0.040 Sum_probs=84.0
Q ss_pred CHHHHHHhcCCCceEEEEeccCCcccc--hhHHHHHHHHHHHHHHHHhcCCCCeEEec--------CCHHHHHHHHHHCC
Q 017440 172 TLQEAFEKVDQSVGFNVELKFDDQLVY--TEEELTHALEAILKVVFEHAQGRPIMFSS--------FQPDAALLIRKLQS 241 (371)
Q Consensus 172 tL~evL~~~~~~~~l~iEiK~~~~~~~--~~~~~~~~~~~vl~~l~~~~~~~~v~i~S--------f~~~~l~~l~~~~p 241 (371)
.|.++|.. ++..+.-|+|..++... ... .-...+....++. . ..++. -+.+.|..+|+..
T Consensus 38 ~f~~al~~--~~~~vIaEvKraSPSkG~i~~~---~~~~~iA~~y~~~--A--~~IsvLTd~~~F~gs~~dL~~vr~~v- 107 (452)
T 1pii_A 38 HFYDALQG--ARTAFILECKKASPSKGVIRDD---FDPARIAAIYKHY--A--SAISVLTDEKYFQGSFNFLPIVSQIA- 107 (452)
T ss_dssp CHHHHHCS--SSCEEEEEECSEETTTEESCSS---CCHHHHHHHHTTT--C--SEEEEECCSTTTCCCTTHHHHHHHHC-
T ss_pred CHHHHHhc--CCCceEEEecCCCCCCCccCCC---CCHHHHHHHHHhh--C--cEEEEEecccccCCCHHHHHHHHHhc-
Confidence 57777752 46899999996433210 000 0012233333222 2 22332 2456788888865
Q ss_pred CCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCC----hHHHHHHHHhCCeEEEecccCChHHHHH
Q 017440 242 TYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKN----PGAIKKIKEAKLCLVSYGELNNVPEVVY 317 (371)
Q Consensus 242 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~v~~~~~~Gl~v~~wgtvn~~~~~~~ 317 (371)
++|+. ... +-...+ + +..++..|++.|.+....+ + .++++.+|+.|+.+.+= +++.+++.+
T Consensus 108 ~lPvL--rKD-------FI~d~~-Q-i~ea~~~GAD~ILLi~a~l--~~~~l~~l~~~a~~lgm~~LvE--vh~~eE~~~ 172 (452)
T 1pii_A 108 PQPIL--CKD-------FIIDPY-Q-IYLARYYQADACLLMLSVL--DDDQYRQLAAVAHSLEMGVLTE--VSNEEEQER 172 (452)
T ss_dssp CSCEE--EES-------CCCSHH-H-HHHHHHTTCSEEEEETTTC--CHHHHHHHHHHHHHTTCEEEEE--ECSHHHHHH
T ss_pred CCCeE--EEe-------ccCCHH-H-HHHHHHcCCCEEEEEcccC--CHHHHHHHHHHHHHcCCeEEEE--eCCHHHHHH
Confidence 67774 221 111122 2 3448899999988776542 3 36888899999999995 888999988
Q ss_pred HHHhcCceEEEeCChH
Q 017440 318 MQRFMGIEGVIVDLVS 333 (371)
Q Consensus 318 l~~~~GVdgIiTD~p~ 333 (371)
.+ ++|++.|-+|...
T Consensus 173 A~-~lga~iIGinnr~ 187 (452)
T 1pii_A 173 AI-ALGAKVVGINNRD 187 (452)
T ss_dssp HH-HTTCSEEEEESEE
T ss_pred HH-HCCCCEEEEeCCC
Confidence 86 6999999887643
No 147
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=37.75 E-value=2.1e+02 Score=27.04 Aligned_cols=115 Identities=12% Similarity=0.154 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccc
Q 017440 205 HALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVR 284 (371)
Q Consensus 205 ~~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 284 (371)
.+-..+.+.+.+.+ .+|++.-.|++.+..+++. ++++.+ ...+ -.+.++.+.-.+++.+.....
T Consensus 14 r~G~~va~~L~~~g--~~vvvId~d~~~v~~~~~~--g~~vi~--GDat----------~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 14 RFGQITGRLLLSSG--VKMVVLDHDPDHIETLRKF--GMKVFY--GDAT----------RMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp HHHHHHHHHHHHTT--CCEEEEECCHHHHHHHHHT--TCCCEE--SCTT----------CHHHHHHTTTTTCSEEEECCS
T ss_pred HHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHhC--CCeEEE--cCCC----------CHHHHHhcCCCccCEEEECCC
Confidence 34566777777765 4688888999999888763 454433 1111 122223222223555554333
Q ss_pred cccCChHHHHHHHHhCC--eEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHH
Q 017440 285 AIFKNPGAIKKIKEAKL--CLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEA 338 (371)
Q Consensus 285 ~~~~~~~~v~~~~~~Gl--~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~ 338 (371)
....+...+..+++.+- .|++- +++......+ ..+|+|-|+.-.-....++
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiar--a~~~~~~~~L-~~~Gad~Vi~~~~~~a~~l 130 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIAR--ARDVDHYIRL-RQAGVEKPERETFEGALKT 130 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEE--ESSHHHHHHH-HHTTCSSCEETTHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEE--ECCHHHHHHH-HHCCCCEEECccHHHHHHH
Confidence 22234457778888875 45554 6677777666 4799999997766555544
No 148
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=37.55 E-value=2.1e+02 Score=26.98 Aligned_cols=50 Identities=14% Similarity=0.326 Sum_probs=27.4
Q ss_pred ChHHHHHHHHhCC--eEEEec-ccCChHHHHHHHHhcCceEEEeCChHHHHHHH
Q 017440 289 NPGAIKKIKEAKL--CLVSYG-ELNNVPEVVYMQRFMGIEGVIVDLVSEITEAV 339 (371)
Q Consensus 289 ~~~~v~~~~~~Gl--~v~~wg-tvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l 339 (371)
+..-+..++++|. ...+|+ ...+.+++..++ +.|+..+..|..+.+..+.
T Consensus 91 s~~E~~~~~~~G~~~~~iv~~g~~k~~~~l~~a~-~~gv~~~~vds~~el~~l~ 143 (425)
T 1f3t_A 91 SNTEIQRVRGIGVPPEKIIYANPCKQISHIRYAR-DSGVDVMTFDCVDELEKVA 143 (425)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHH-HTTCCEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHH
Confidence 4455566666665 234441 223455555554 5666556667776666553
No 149
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=37.49 E-value=1.3e+02 Score=22.44 Aligned_cols=52 Identities=15% Similarity=0.104 Sum_probs=32.0
Q ss_pred HHHHHHHHh--CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhc
Q 017440 291 GAIKKIKEA--KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~~--Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~ 344 (371)
++++.+++. +.++.+. +-. +.+.....+ ..|++++++- .+..+.+.++...+
T Consensus 69 ~~~~~l~~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~l~~~~~ 125 (140)
T 2qr3_A 69 FWLHEIKRQYRDLPVVLF-TAYADIDLAVRGI-KEGASDFVVKPWDNQKLLETLLNAAS 125 (140)
T ss_dssp HHHHHHHHHCTTCCEEEE-EEGGGHHHHHHHH-HTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCcCCCEEEE-ECCCCHHHHHHHH-HcCchheeeCCCCHHHHHHHHHHHHH
Confidence 566777765 4677777 443 334445554 6999998875 35566666655443
No 150
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=37.39 E-value=42 Score=29.30 Aligned_cols=88 Identities=14% Similarity=0.077 Sum_probs=52.8
Q ss_pred ecCCHHHHHHHHHHCCCCCeE--EEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc-ccCChHHHHHHHHhCCe
Q 017440 226 SSFQPDAALLIRKLQSTYPVF--FLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA-IFKNPGAIKKIKEAKLC 302 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~~~~Gl~ 302 (371)
.+|-+..++.+|+.. +.++- +.+.. ....++.+.+.|++++..+++. ..--.+.++.++++|.+
T Consensus 42 ~t~G~~~v~~lr~~~-~~~~dvhLmv~d------------p~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k 108 (231)
T 3ctl_A 42 LTLSPFFVSQVKKLA-TKPLDCHLMVTR------------PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMK 108 (231)
T ss_dssp CCBCHHHHHHHHTTC-CSCEEEEEESSC------------GGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCE
T ss_pred chhcHHHHHHHHhcc-CCcEEEEEEecC------------HHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCe
Confidence 367888888888763 44432 22221 1112355667799999888765 32235789999999999
Q ss_pred EEEecccCChHH-HHHHHHhcCceEEE
Q 017440 303 LVSYGELNNVPE-VVYMQRFMGIEGVI 328 (371)
Q Consensus 303 v~~wgtvn~~~~-~~~l~~~~GVdgIi 328 (371)
+.+--...++.+ +.+++ -++|.|.
T Consensus 109 ~gv~lnp~tp~~~~~~~l--~~~D~Vl 133 (231)
T 3ctl_A 109 VGLILNPETPVEAMKYYI--HKADKIT 133 (231)
T ss_dssp EEEEECTTCCGGGGTTTG--GGCSEEE
T ss_pred EEEEEECCCcHHHHHHHH--hcCCEEE
Confidence 876412334433 33332 4788774
No 151
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=37.34 E-value=1.4e+02 Score=28.58 Aligned_cols=68 Identities=10% Similarity=0.058 Sum_probs=47.8
Q ss_pred cHHHHHHHHHhCCCceEeccccccc---------------------CChHHHHHHHHh---CCeEEEecccCChHHHHHH
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRAIF---------------------KNPGAIKKIKEA---KLCLVSYGELNNVPEVVYM 318 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~~~---------------------~~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l 318 (371)
.+.+..+.+.+.|+++|.+.-.... ..-+.+..++++ .+.|..=|-|.+.+++.++
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~ 363 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK 363 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHH
Confidence 3556667777889998876532110 011567777775 3788887789999999998
Q ss_pred HHhcCceEEEeCC
Q 017440 319 QRFMGIEGVIVDL 331 (371)
Q Consensus 319 ~~~~GVdgIiTD~ 331 (371)
+ ..|+|+|..=+
T Consensus 364 l-~aGAd~VqIgr 375 (415)
T 3i65_A 364 I-EAGASVCQLYS 375 (415)
T ss_dssp H-HHTEEEEEESH
T ss_pred H-HcCCCEEEEcH
Confidence 7 59999998544
No 152
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=37.29 E-value=1.9e+02 Score=26.45 Aligned_cols=47 Identities=11% Similarity=0.107 Sum_probs=35.7
Q ss_pred ChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHH
Q 017440 289 NPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEIT 336 (371)
Q Consensus 289 ~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~ 336 (371)
+.+.+..+++. ++.|.+=|-+.+.+++.+++ .+|+|+|+.=.|-...
T Consensus 238 ~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l-~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 238 TAASLAEIRSEFPASTMIASGGLQDALDVAKAI-ALGASCTGMAGHFLKA 286 (349)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHHHH
Confidence 34556666664 68888877799999999986 6999999988865443
No 153
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=37.17 E-value=1.9e+02 Score=26.38 Aligned_cols=92 Identities=12% Similarity=0.068 Sum_probs=57.5
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccc--cccc----------C--ChHHHHH
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEV--RAIF----------K--NPGAIKK 295 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~----------~--~~~~v~~ 295 (371)
++.++.+++..+..++..- .. .+.+ ..+.+...|+++|.+.. .... . +...+.+
T Consensus 137 ~~~i~~lr~~~~~~~vi~G--~v---------~s~e-~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~ 204 (336)
T 1ypf_A 137 INMIQHIKKHLPESFVIAG--NV---------GTPE-AVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRW 204 (336)
T ss_dssp HHHHHHHHHHCTTSEEEEE--EE---------CSHH-HHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEC--Cc---------CCHH-HHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHH
Confidence 4567777776655444321 00 1223 34556677888877621 0000 0 2345555
Q ss_pred HHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCChHH
Q 017440 296 IKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSE 334 (371)
Q Consensus 296 ~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~ 334 (371)
+.++ +++|++-|-+.+..++.+++ .+|+|+|+.-++-.
T Consensus 205 v~~~~~ipVIa~GGI~~g~Dv~kal-alGAdaV~iGr~~l 243 (336)
T 1ypf_A 205 CAKAASKPIIADGGIRTNGDVAKSI-RFGATMVMIGSLFA 243 (336)
T ss_dssp HHHTCSSCEEEESCCCSTHHHHHHH-HTTCSEEEESGGGT
T ss_pred HHHHcCCcEEEeCCCCCHHHHHHHH-HcCCCEEEeChhhh
Confidence 5554 78898877788999998887 69999999988876
No 154
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=36.84 E-value=2.3e+02 Score=25.28 Aligned_cols=74 Identities=14% Similarity=0.071 Sum_probs=34.6
Q ss_pred HHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC---eEEEecccCChHHHHHHHHhcC----ceEEEeC--ChHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL---CLVSYGELNNVPEVVYMQRFMG----IEGVIVD--LVSE 334 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl---~v~~wgtvn~~~~~~~l~~~~G----VdgIiTD--~p~~ 334 (371)
+...++.|+..+...+ ++... ...++++.+++.+. .+...+.-.+.+++.+++ ++| +.|.+|. +...
T Consensus 116 F~~ql~lA~e~~lPv~-iH~r~--a~~~~l~il~~~~~~~~~~V~H~fsG~~e~a~~~l-~~G~yis~~g~i~~~k~~~~ 191 (287)
T 3rcm_A 116 LEAQLTLAAQLRLPVF-LHERD--ASERLLAILKDYRDHLTGAVVHCFTGEREALFAYL-DLDLHIGITGWICDERRGTH 191 (287)
T ss_dssp HHHHHHHHHHHTCCEE-EEEES--CHHHHHHHHHTTGGGCSCEEECSCCCCHHHHHHHH-HTTCEEEECGGGGCTTTCGG
T ss_pred HHHHHHHHHHhCCCEE-EEcCC--cHHHHHHHHHHcCCCCCeEEEEeCCCCHHHHHHHH-HCCcEEEECchhccccCHHH
Confidence 4455666766664322 22222 24556666665542 222221123455666664 455 3343442 3455
Q ss_pred HHHHHHh
Q 017440 335 ITEAVSD 341 (371)
Q Consensus 335 l~~~l~~ 341 (371)
++++++.
T Consensus 192 l~~~v~~ 198 (287)
T 3rcm_A 192 LHPLVGN 198 (287)
T ss_dssp GHHHHTT
T ss_pred HHHHHHh
Confidence 5555554
No 155
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=36.34 E-value=91 Score=29.41 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=56.7
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccc-----------c-cccCChHHHHHHH
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEV-----------R-AIFKNPGAIKKIK 297 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----------~-~~~~~~~~v~~~~ 297 (371)
.+.++.+++..|++|+..-. . .+.+ ..+.+...|+++|.+.. . .-......+..++
T Consensus 182 ~e~i~~ir~~~~~~pviv~~--v---------~~~~-~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~ 249 (404)
T 1eep_A 182 IELIKKIKTKYPNLDLIAGN--I---------VTKE-AALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVY 249 (404)
T ss_dssp HHHHHHHHHHCTTCEEEEEE--E---------CSHH-HHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEEcC--C---------CcHH-HHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHH
Confidence 45667777877777776410 0 1233 34556678898887611 0 0001123344444
Q ss_pred H----hCCeEEEecccCChHHHHHHHHhcCceEEEeCChH
Q 017440 298 E----AKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVS 333 (371)
Q Consensus 298 ~----~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~ 333 (371)
+ .+++|++-|-+.+..++.+++ .+|+|+|..-++-
T Consensus 250 ~~~~~~~ipVia~GGI~~~~d~~~al-a~GAd~V~iG~~~ 288 (404)
T 1eep_A 250 EACNNTNICIIADGGIRFSGDVVKAI-AAGADSVMIGNLF 288 (404)
T ss_dssp HHHTTSSCEEEEESCCCSHHHHHHHH-HHTCSEEEECHHH
T ss_pred HHHhhcCceEEEECCCCCHHHHHHHH-HcCCCHHhhCHHH
Confidence 3 478888877799999998887 6999999886554
No 156
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=36.25 E-value=1.1e+02 Score=23.92 Aligned_cols=51 Identities=10% Similarity=0.158 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC---ChHHHHHHHHhh
Q 017440 291 GAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD---LVSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD---~p~~l~~~l~~~ 342 (371)
+.++.++++|+++.+- |-+........+..+|++.++.. .|..+..+++++
T Consensus 43 ~~l~~l~~~g~~~~i~-T~~~~~~~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~ 96 (162)
T 2p9j_A 43 IGIKLLQKMGITLAVI-SGRDSAPLITRLKELGVEEIYTGSYKKLEIYEKIKEKY 96 (162)
T ss_dssp HHHHHHHTTTCEEEEE-ESCCCHHHHHHHHHTTCCEEEECC--CHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEE-eCCCcHHHHHHHHHcCCHhhccCCCCCHHHHHHHHHHc
Confidence 5667777777777666 55555555555455666655532 344444454443
No 157
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=35.89 E-value=2.2e+02 Score=24.72 Aligned_cols=125 Identities=10% Similarity=0.049 Sum_probs=70.4
Q ss_pred CCCCeEEec--------CCHHHHHHHH---HHCCCCCeEEEcCCCCc--ccCCCCcccHHHHHHHHHhCCCceEeccccc
Q 017440 219 QGRPIMFSS--------FQPDAALLIR---KLQSTYPVFFLTNGGAQ--TCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA 285 (371)
Q Consensus 219 ~~~~v~i~S--------f~~~~l~~l~---~~~p~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 285 (371)
-.+|+-++| .+...++.++ +. -++|+..+..+... .|.+....-+.+-++.++..|++|++.-.-.
T Consensus 21 GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~~-~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt 99 (224)
T 2bdq_A 21 IISRVELCDNLAVGGTTPSYGVIKEANQYLHE-KGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILT 99 (224)
T ss_dssp TCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHH-TTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBC
T ss_pred CCCEEEEcCCcccCCcCCCHHHHHHHHHhhhh-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeEC
Confidence 355777665 5677777776 44 36899888765321 1221111123445677899999999864311
Q ss_pred --ccCChHHHHHHH--HhCCeEEEec---cc--CChHHHHHHHHhcCceEEEeC----C--hHHHHHHHHhhhc
Q 017440 286 --IFKNPGAIKKIK--EAKLCLVSYG---EL--NNVPEVVYMQRFMGIEGVIVD----L--VSEITEAVSDFIK 344 (371)
Q Consensus 286 --~~~~~~~v~~~~--~~Gl~v~~wg---tv--n~~~~~~~l~~~~GVdgIiTD----~--p~~l~~~l~~~~~ 344 (371)
-.++.+.++.+- ..|+.+.... .+ .|+.+..+.+.++|++.|.|- . ...-.+.|+++.+
T Consensus 100 ~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~ 173 (224)
T 2bdq_A 100 SNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVE 173 (224)
T ss_dssp TTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHH
Confidence 113444444332 2367765432 13 455554444458999999995 3 4444555555543
No 158
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.86 E-value=1.5e+02 Score=22.80 Aligned_cols=78 Identities=14% Similarity=0.090 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCceEecccccccC-ChHHHHHHHHh----CCeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEA----KLCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEI 335 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~----Gl~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l 335 (371)
..++++.+.....+.+.++....-. .-++++.+++. ..++.+. +- .+.+....++ ..|++++++- .+..+
T Consensus 40 ~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~-s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l 117 (154)
T 3gt7_A 40 GREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILL-TILSDPRDVVRSL-ECGADDFITKPCKDVVL 117 (154)
T ss_dssp HHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEE-ECCCSHHHHHHHH-HHCCSEEEESSCCHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEE-ECCCChHHHHHHH-HCCCCEEEeCCCCHHHH
Confidence 3444444444445555444332111 13567777764 4667777 44 3444555554 6899998875 34555
Q ss_pred HHHHHhhh
Q 017440 336 TEAVSDFI 343 (371)
Q Consensus 336 ~~~l~~~~ 343 (371)
.+.++...
T Consensus 118 ~~~i~~~l 125 (154)
T 3gt7_A 118 ASHVKRLL 125 (154)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 159
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=35.73 E-value=2.2e+02 Score=24.74 Aligned_cols=108 Identities=15% Similarity=0.115 Sum_probs=54.1
Q ss_pred CCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHh-
Q 017440 221 RPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA- 299 (371)
Q Consensus 221 ~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~- 299 (371)
+.++|++.-...+..+++. ++.-++.... . .......+.+...|+..+-+.++.. -..+.++.+++.
T Consensus 16 ~~~~~~~~m~~~~~~l~~~----~vv~Vir~~~-----~--~~a~~~a~al~~gGi~~iEvt~~t~-~a~e~I~~l~~~~ 83 (232)
T 4e38_A 16 ENLYFQSMMSTINNQLKAL----KVIPVIAIDN-----A--EDIIPLGKVLAENGLPAAEITFRSD-AAVEAIRLLRQAQ 83 (232)
T ss_dssp ----CCCCHHHHHHHHHHH----CEEEEECCSS-----G--GGHHHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHhC----CEEEEEEcCC-----H--HHHHHHHHHHHHCCCCEEEEeCCCC-CHHHHHHHHHHhC
Confidence 3566666544555555542 3433333211 0 1233334445556777665443321 123466666664
Q ss_pred -CCeEEEecccCChHHHHHHHHhcCceEEEeCCh-HHHHHHHHhh
Q 017440 300 -KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV-SEITEAVSDF 342 (371)
Q Consensus 300 -Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p-~~l~~~l~~~ 342 (371)
++.+.+= ||-+.++++..+ +.|++.|++-.- ..+.++.+++
T Consensus 84 ~~~~iGaG-TVlt~~~a~~Ai-~AGA~fIvsP~~~~~vi~~~~~~ 126 (232)
T 4e38_A 84 PEMLIGAG-TILNGEQALAAK-EAGATFVVSPGFNPNTVRACQEI 126 (232)
T ss_dssp TTCEEEEE-CCCSHHHHHHHH-HHTCSEEECSSCCHHHHHHHHHH
T ss_pred CCCEEeEC-CcCCHHHHHHHH-HcCCCEEEeCCCCHHHHHHHHHc
Confidence 4555554 787777777765 688888876432 2334444444
No 160
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=35.18 E-value=47 Score=26.64 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=9.2
Q ss_pred HHHHHHHHhCCeEEEecccC
Q 017440 291 GAIKKIKEAKLCLVSYGELN 310 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wgtvn 310 (371)
+.++.++++|..+..+ |-.
T Consensus 31 ~al~~l~~~G~~iii~-TgR 49 (142)
T 2obb_A 31 ETLKLLQQEKHRLILW-SVR 49 (142)
T ss_dssp HHHHHHHHTTCEEEEC-CSC
T ss_pred HHHHHHHHCCCEEEEE-eCC
Confidence 3444444555555555 444
No 161
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=34.95 E-value=2.7e+02 Score=26.49 Aligned_cols=68 Identities=16% Similarity=0.159 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCe--EEEe-cccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLC--LVSY-GELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~--v~~w-gtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
...++.....|+ ++.+ .+..-+..+.++|+. ..+| |...+.+++..++ +.|+..+..|..+++..+.+
T Consensus 87 ~~v~~~l~~~G~-g~dv------aS~~E~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 157 (443)
T 3vab_A 87 QAVLTALAKLGA-GADT------VSQGEIRRALAAGIPANRIVFSGVGKTPREMDFAL-EAGIYCFNVESEPELEILSA 157 (443)
T ss_dssp HHHHHHHHHTTC-EEEE------SSHHHHHHHHHTTCCGGGEEEECTTCCHHHHHHHH-HHTCSEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHcCC-cEEE------eCHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHH-HCCCCEEEECCHHHHHHHHH
Confidence 344555666676 4432 256667778888873 2333 2345677777775 68888788899888876643
No 162
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=34.83 E-value=71 Score=30.00 Aligned_cols=62 Identities=15% Similarity=0.231 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCCceEecccccccCCh---HHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFKNP---GAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~~~---~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
.+.++.+...|++.|+++...- ..+ +.+++++++ ++.|.+- ++.+.+++.++. +.|+|+|..
T Consensus 110 ~~~~~~lieaGvd~I~idta~G-~~~~~~~~I~~ik~~~p~v~Vi~G-~v~t~e~A~~a~-~aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHG-HSEGVLQRIRETRAAYPHLEIIGG-NVATAEGARALI-EAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT-TSHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHH-HHTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCC-CCHHHHHHHHHHHHhcCCCceEee-eeCCHHHHHHHH-HcCCCEEEE
Confidence 3445666778898887643211 122 456778887 7787775 788888888885 799999987
No 163
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=34.68 E-value=2.7e+02 Score=25.53 Aligned_cols=25 Identities=8% Similarity=0.002 Sum_probs=20.2
Q ss_pred cccchHHHHHHHHhCCCCEEEEEEe
Q 017440 74 IKENTILSFNAAARHPLDFIEFDVQ 98 (371)
Q Consensus 74 ~PENTl~Af~~A~~~Gad~IE~DV~ 98 (371)
.||....|-+.+.+.|+|+||+-.-
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~g 92 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLG 92 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCc
Confidence 4777888888888999999976653
No 164
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.60 E-value=20 Score=32.05 Aligned_cols=41 Identities=20% Similarity=0.082 Sum_probs=30.6
Q ss_pred hHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 290 PGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 290 ~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.+.++.+++. +++|.+=|-+++++...+++ ..|+|+++.=.
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~-~agAD~vVVGS 235 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAV-RAGAAGAISGS 235 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHH-HcCCCEEEECh
Confidence 4678888876 46666554588888888864 58999998754
No 165
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=34.53 E-value=1e+02 Score=26.50 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVY 317 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~ 317 (371)
.+.++.+...|+++++++.....-..++++.+++.|..+..--...++.+..+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~ 150 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLK 150 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHH
Confidence 45667778889999887642211123677888999988654313444444433
No 166
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=34.52 E-value=2.2e+02 Score=24.43 Aligned_cols=105 Identities=10% Similarity=0.057 Sum_probs=58.4
Q ss_pred cCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCCh----HHHHHHHHhCCe
Q 017440 227 SFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNP----GAIKKIKEAKLC 302 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~v~~~~~~Gl~ 302 (371)
+|-+..++.+++. ++.++.+-.. ..|.. +....+++.+...|++.+.++... .. ..++.+++.|..
T Consensus 50 ~~G~~~v~~l~~~-~g~~v~lD~K-----l~Dip-nTv~~~~~~~~~~gad~vtvh~~~---G~~~l~~~~~~~~~~g~~ 119 (228)
T 3m47_A 50 SEGMDIIAEFRKR-FGCRIIADFK-----VADIP-ETNEKICRATFKAGADAIIVHGFP---GADSVRACLNVAEEMGRE 119 (228)
T ss_dssp HHCTHHHHHHHHH-HCCEEEEEEE-----ECSCH-HHHHHHHHHHHHTTCSEEEEESTT---CHHHHHHHHHHHHHHTCE
T ss_pred hcCHHHHHHHHhc-CCCeEEEEEe-----ecccH-hHHHHHHHHHHhCCCCEEEEeccC---CHHHHHHHHHHHHhcCCC
Confidence 4566777788774 2444443221 11221 223445566667899988876542 23 355666777877
Q ss_pred EEEeccc-CChH----------HHHHHHHhcCceEEEeCC--hHHHHHHHHhh
Q 017440 303 LVSYGEL-NNVP----------EVVYMQRFMGIEGVIVDL--VSEITEAVSDF 342 (371)
Q Consensus 303 v~~wgtv-n~~~----------~~~~l~~~~GVdgIiTD~--p~~l~~~l~~~ 342 (371)
|.+= |- .++. ...++..+.|++|+++-. |+.+.++.+..
T Consensus 120 v~vL-t~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~~~e~~~ir~~~ 171 (228)
T 3m47_A 120 VFLL-TEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREII 171 (228)
T ss_dssp EEEE-CCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSCHHHHHHHHHHH
T ss_pred eEEE-EeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhc
Confidence 7653 21 1111 122333468999999874 77776665543
No 167
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=34.46 E-value=1.1e+02 Score=28.42 Aligned_cols=112 Identities=13% Similarity=-0.025 Sum_probs=62.0
Q ss_pred HHHHHHHHHCC-CCCeEEEcCCCCcccCC-CCcccHHHHHHHHHhCCCceEecccccc----------cCChHHHHHHHH
Q 017440 231 DAALLIRKLQS-TYPVFFLTNGGAQTCTD-VRRSSLDEAIKVCLAGGLQGIVSEVRAI----------FKNPGAIKKIKE 298 (371)
Q Consensus 231 ~~l~~l~~~~p-~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~~~v~~~~~ 298 (371)
++++.+|+..+ ++|+++-+......... .......+..+.+...|++.+++..... .....+++.+++
T Consensus 213 eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~ 292 (363)
T 3l5l_A 213 ETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRR 292 (363)
T ss_dssp HHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHH
Confidence 45566665543 56776644321100000 0001122334455667888887653110 012345666665
Q ss_pred h-CCeEEEecccCChHHHHHHHHhcC-ceEEEeCC-----hHHHHHHHHhhh
Q 017440 299 A-KLCLVSYGELNNVPEVVYMQRFMG-IEGVIVDL-----VSEITEAVSDFI 343 (371)
Q Consensus 299 ~-Gl~v~~wgtvn~~~~~~~l~~~~G-VdgIiTD~-----p~~l~~~l~~~~ 343 (371)
+ ++.|.+=|-+++.+++.+++ +.| +|.|.--+ |+...++.+++.
T Consensus 293 ~~~iPVi~~GgI~s~e~a~~~l-~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 293 EAKLPVTSAWGFGTPQLAEAAL-QANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp HHTCCEEECSSTTSHHHHHHHH-HTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred HcCCcEEEeCCCCCHHHHHHHH-HCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 4 68888777788899998887 577 99997543 555666655543
No 168
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=34.37 E-value=2.5e+02 Score=27.54 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=62.7
Q ss_pred cCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccc--c-c---cCChHHHHHHHHh-
Q 017440 227 SFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVR--A-I---FKNPGAIKKIKEA- 299 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~-~---~~~~~~v~~~~~~- 299 (371)
++.++.++.+++.. ++|+..-.. .+.+. ...+...|+++|.+... . + ..+-+.+..++++
T Consensus 329 ~~~~~~i~~lr~~~-~~PvivKgv-----------~~~e~-A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v 395 (511)
T 1kbi_A 329 SLTWKDIEELKKKT-KLPIVIKGV-----------QRTED-VIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPIL 395 (511)
T ss_dssp TCCHHHHHHHHHHC-SSCEEEEEE-----------CSHHH-HHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHh-CCcEEEEeC-----------CCHHH-HHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHH
Confidence 36688899998875 577765311 12233 45677889999887321 1 0 0011233333332
Q ss_pred -------CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHH
Q 017440 300 -------KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEIT 336 (371)
Q Consensus 300 -------Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~ 336 (371)
++.|++=|-+.+..++.+++ .+|+|+|..=+|-...
T Consensus 396 ~~~~~~~~ipVia~GGI~~g~Dv~kaL-alGAdaV~iGr~~l~~ 438 (511)
T 1kbi_A 396 EQRNLKDKLEVFVDGGVRRGTDVLKAL-CLGAKGVGLGRPFLYA 438 (511)
T ss_dssp HTTTCBTTBEEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHH
T ss_pred HhhccCCCcEEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHHH
Confidence 57888888899999999987 6999999999886653
No 169
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=34.31 E-value=52 Score=27.87 Aligned_cols=102 Identities=10% Similarity=0.031 Sum_probs=57.7
Q ss_pred ecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHh-CCeEE
Q 017440 226 SSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA-KLCLV 304 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~-Gl~v~ 304 (371)
.+|-+..++.+|+.. +.++.+-.. ..|.. ++....++.+...|++.+.++... ....++.+++. |+.+.
T Consensus 36 ~~~G~~~i~~lr~~~-~~~v~~D~k-----l~DI~-~t~~~~v~~~~~~Gad~vtvh~~~---g~~~i~~~~~~~gv~vl 105 (208)
T 2czd_A 36 LGSGVDIIRRLKEET-GVEIIADLK-----LADIP-NTNRLIARKVFGAGADYVIVHTFV---GRDSVMAVKELGEIIMV 105 (208)
T ss_dssp HHHCTTHHHHHHHHH-CCEEEEEEE-----ECSCH-HHHHHHHHHHHHTTCSEEEEESTT---CHHHHHHHHTTSEEEEE
T ss_pred HhhCHHHHHHHHHcC-CCEEEEEee-----eCchH-HHHHHHHHHHHhcCCCEEEEeccC---CHHHHHHHHHhCCcEEE
Confidence 456666777888763 334433221 11211 223445566667899988877653 56779999988 55556
Q ss_pred EecccCCh---------HHHHHHHHhcCceEEEeCC--hHHHHHH
Q 017440 305 SYGELNNV---------PEVVYMQRFMGIEGVIVDL--VSEITEA 338 (371)
Q Consensus 305 ~wgtvn~~---------~~~~~l~~~~GVdgIiTD~--p~~l~~~ 338 (371)
+- |-+.. +....+..+.|++|+..-. ++.+.++
T Consensus 106 ~~-t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~l 149 (208)
T 2czd_A 106 VE-MSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPERIGYI 149 (208)
T ss_dssp CC-CCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSSTHHHHHH
T ss_pred Ee-cCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHH
Confidence 55 43321 1112233468999987543 3455443
No 170
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=34.28 E-value=89 Score=26.97 Aligned_cols=51 Identities=18% Similarity=0.260 Sum_probs=35.5
Q ss_pred HHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC-----hHHHHHHHHhh
Q 017440 291 GAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL-----VSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~-----p~~l~~~l~~~ 342 (371)
+.++.+++. ++++.+-|-+++.+++..++ ..|+|+|+... |+.+.++++.+
T Consensus 65 ~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~-~~Gad~V~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 65 DVVARVAERVFIPLTVGGGVRSLEDARKLL-LSGADKVSVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEECCcCCHHHHHHHH-HcCCCEEEEChHHHhCcHHHHHHHHHc
Confidence 345666554 67887766788888888886 68999998765 44466665544
No 171
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=33.87 E-value=1.5e+02 Score=28.94 Aligned_cols=91 Identities=13% Similarity=0.129 Sum_probs=58.5
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccc--ccc-----c--C---Ch---HHHH
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEV--RAI-----F--K---NP---GAIK 294 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~-----~--~---~~---~~v~ 294 (371)
.+.++.+++..|++|+..-.- .+... .+.+...|++++.+.. ... . . .. ..+.
T Consensus 284 ~~~i~~i~~~~~~~pvi~~~v-----------~t~~~-a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~ 351 (514)
T 1jcn_A 284 IAMVHYIKQKYPHLQVIGGNV-----------VTAAQ-AKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVA 351 (514)
T ss_dssp HHHHHHHHHHCTTCEEEEEEE-----------CSHHH-HHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEeccc-----------chHHH-HHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHH
Confidence 477888999888888764110 12333 3455677888885521 000 0 0 11 3344
Q ss_pred HHHH-hCCeEEEecccCChHHHHHHHHhcCceEEEeCChH
Q 017440 295 KIKE-AKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVS 333 (371)
Q Consensus 295 ~~~~-~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~ 333 (371)
.+.+ .+++|++-|-+.+..++.+++ .+|+|+|..=++-
T Consensus 352 ~~~~~~~ipVia~GGI~~~~di~kal-a~GAd~V~iG~~~ 390 (514)
T 1jcn_A 352 EYARRFGVPIIADGGIQTVGHVVKAL-ALGASTVMMGSLL 390 (514)
T ss_dssp HHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTT
T ss_pred HHHhhCCCCEEEECCCCCHHHHHHHH-HcCCCeeeECHHH
Confidence 4433 489999888899999998987 6999999987754
No 172
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=33.85 E-value=3.2e+02 Score=26.00 Aligned_cols=104 Identities=11% Similarity=0.169 Sum_probs=61.2
Q ss_pred CCCCeEEecCC--HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHH
Q 017440 219 QGRPIMFSSFQ--PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKI 296 (371)
Q Consensus 219 ~~~~v~i~Sf~--~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 296 (371)
...++++.+.+ ...++.+++..|+....+.+... .....++.+...|. ++.+ .+..-+..+
T Consensus 36 ~~tP~~vid~~~l~~n~~~~~~~~~~~~i~yavKAn----------~~~~v~~~l~~~G~-g~~v------aS~~E~~~~ 98 (448)
T 3btn_A 36 GKNAFFVGDLGKIVKKHSQWQTVVAQIKPFYTVKCN----------STPAVLEILAALGT-GFAC------SSKNEMALV 98 (448)
T ss_dssp SCCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHHTC-EEEE------SSHHHHHHH
T ss_pred CCCCEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeC----------CCHHHHHHHHHcCC-cEEE------eCHHHHHHH
Confidence 34456664433 23345566666655555544432 22344455555663 4432 256677788
Q ss_pred HHhCC--eEEEec-ccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 297 KEAKL--CLVSYG-ELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 297 ~~~Gl--~v~~wg-tvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
+++|+ ...+|. ...+.+++..++ +.|+..+..|..+++..+-+
T Consensus 99 ~~aG~~~~~iv~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 144 (448)
T 3btn_A 99 QELGVSPENIIFTSPCKQVSQIKYAA-KVGVNIMTCDNEIELKKIAR 144 (448)
T ss_dssp HHTTCCGGGEEECCSSCCHHHHHHHH-HHTCCEEEECSHHHHHHHHH
T ss_pred HHcCCChhhEEEcCCCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHH
Confidence 88887 344451 334677777765 68888788999988887643
No 173
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=33.76 E-value=2.3e+02 Score=26.68 Aligned_cols=95 Identities=18% Similarity=0.206 Sum_probs=61.9
Q ss_pred CCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc------ccCChHHHHHHHHh--
Q 017440 228 FQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA------IFKNPGAIKKIKEA-- 299 (371)
Q Consensus 228 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~v~~~~~~-- 299 (371)
+.++.++.+++.. +.|+..-.. .+.+. .+.+...|+++|.+.... -..+-+.+.+++++
T Consensus 239 ~~~~~i~~lr~~~-~~PvivKgv-----------~~~e~-A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~ 305 (392)
T 2nzl_A 239 ISWEDIKWLRRLT-SLPIVAKGI-----------LRGDD-AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVE 305 (392)
T ss_dssp CCHHHHHHHC--C-CSCEEEEEE-----------CCHHH-HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh-CCCEEEEec-----------CCHHH-HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcC
Confidence 5677888887765 466654210 12233 456678899998874211 11123455555543
Q ss_pred -CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHH
Q 017440 300 -KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEIT 336 (371)
Q Consensus 300 -Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~ 336 (371)
.++|++=|-+.+..++.+++ .+|+|+|..-+|-...
T Consensus 306 ~~ipVia~GGI~~g~Dv~kal-alGAd~V~iGr~~l~~ 342 (392)
T 2nzl_A 306 GKVEVFLDGGVRKGTDVLKAL-ALGAKAVFVGRPIVWG 342 (392)
T ss_dssp TSSEEEECSSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHH-HhCCCeeEECHHHHHH
Confidence 48898888899999999987 6999999999986654
No 174
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=33.72 E-value=88 Score=25.33 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=32.9
Q ss_pred HHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe---CChHHHHHHHHhh
Q 017440 292 AIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV---DLVSEITEAVSDF 342 (371)
Q Consensus 292 ~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT---D~p~~l~~~l~~~ 342 (371)
.++.++++|+++.+- |-+.......++..+|++ ++. +.|..+.++++++
T Consensus 47 ~l~~L~~~g~~~~i~-T~~~~~~~~~~~~~lgi~-~~~~~~~k~~~l~~~~~~~ 98 (176)
T 3mmz_A 47 GIAALRKSGLTMLIL-STEQNPVVAARARKLKIP-VLHGIDRKDLALKQWCEEQ 98 (176)
T ss_dssp HHHHHHHTTCEEEEE-ESSCCHHHHHHHHHHTCC-EEESCSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEE-ECcChHHHHHHHHHcCCe-eEeCCCChHHHHHHHHHHc
Confidence 588888888888877 666666666666667887 554 3445555555554
No 175
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=33.70 E-value=2.9e+02 Score=25.48 Aligned_cols=92 Identities=11% Similarity=-0.013 Sum_probs=58.1
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc------------ccCC----hHHH
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA------------IFKN----PGAI 293 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------~~~~----~~~v 293 (371)
++.++.+++..|++|++.-. . .+.++ .+.+...|+++|.+.... ...+ ++..
T Consensus 149 ~~~i~~lr~~~~~~~vi~g~--v---------~t~e~-A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~ 216 (351)
T 2c6q_A 149 VEFVKDVRKRFPQHTIMAGN--V---------VTGEM-VEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECA 216 (351)
T ss_dssp HHHHHHHHHHCTTSEEEEEE--E---------CSHHH-HHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEe--C---------CCHHH-HHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHH
Confidence 34677777777777765311 0 12333 345677899988543210 0001 2333
Q ss_pred HHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHH
Q 017440 294 KKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSE 334 (371)
Q Consensus 294 ~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~ 334 (371)
+.+.+.++.|++=|-+.+..++.+.+ .+|+|+|..-.+-.
T Consensus 217 ~~~~~~~ipvIa~GGI~~g~di~kAl-alGA~~V~vG~~fl 256 (351)
T 2c6q_A 217 DAAHGLKGHIISDGGCSCPGDVAKAF-GAGADFVMLGGMLA 256 (351)
T ss_dssp HHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTT
T ss_pred HHHhhcCCcEEEeCCCCCHHHHHHHH-HcCCCceeccHHHh
Confidence 44445589998877789999998887 79999998887754
No 176
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=33.46 E-value=1.4e+02 Score=21.83 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=29.6
Q ss_pred HHHHHHHHh----CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhh
Q 017440 291 GAIKKIKEA----KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~~----Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~ 342 (371)
++++.+++. +.++.+. |-. +.+...+.+ ..|++++++- .++.+.+.+++.
T Consensus 63 ~~~~~l~~~~~~~~~pii~~-s~~~~~~~~~~~~-~~Ga~~~l~KP~~~~~L~~~i~~~ 119 (122)
T 3gl9_A 63 TVLKKLQEKEEWKRIPVIVL-TAKGGEEDESLAL-SLGARKVMRKPFSPSQFIEEVKHL 119 (122)
T ss_dssp HHHHHHHTSTTTTTSCEEEE-ESCCSHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcccccCCCEEEE-ecCCchHHHHHHH-hcChhhhccCCCCHHHHHHHHHHH
Confidence 456666553 4667776 544 444445554 6999998875 345555555443
No 177
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=33.22 E-value=1.2e+02 Score=24.98 Aligned_cols=50 Identities=12% Similarity=0.009 Sum_probs=33.9
Q ss_pred HHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC---ChHHHHHHHHhh
Q 017440 292 AIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD---LVSEITEAVSDF 342 (371)
Q Consensus 292 ~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD---~p~~l~~~l~~~ 342 (371)
.++.++++|+++.+- |-+........+..+|++.++.. .|..+..+++++
T Consensus 54 ~l~~L~~~g~~~~iv-Tn~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~ 106 (191)
T 3n1u_A 54 GLKLLMAAGIQVAII-TTAQNAVVDHRMEQLGITHYYKGQVDKRSAYQHLKKTL 106 (191)
T ss_dssp HHHHHHHTTCEEEEE-CSCCSHHHHHHHHHHTCCEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEE-eCcChHHHHHHHHHcCCccceeCCCChHHHHHHHHHHh
Confidence 377888888888877 66665666666556787776654 366666666654
No 178
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=33.06 E-value=1.3e+02 Score=30.84 Aligned_cols=16 Identities=13% Similarity=0.248 Sum_probs=14.1
Q ss_pred HHHHHHHHhCCeEEEe
Q 017440 291 GAIKKIKEAKLCLVSY 306 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~w 306 (371)
.+++++|++|+++.+|
T Consensus 396 ~lvd~ih~~Glk~GlW 411 (720)
T 2yfo_A 396 ELITRVHEQGMKFGIW 411 (720)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 4789999999999988
No 179
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=32.97 E-value=2.7e+02 Score=26.01 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=63.0
Q ss_pred cCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccc--cc----ccCChHHHHHHHH-h
Q 017440 227 SFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEV--RA----IFKNPGAIKKIKE-A 299 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~----~~~~~~~v~~~~~-~ 299 (371)
.++++.++.+++.. ++|+..-. . .+.+ ..+.+...|+++|.+.. .. ...+-+.+.++++ .
T Consensus 211 ~~~~~~i~~i~~~~-~~Pv~vkg--v---------~t~e-~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~ 277 (380)
T 1p4c_A 211 SFNWEALRWLRDLW-PHKLLVKG--L---------LSAE-DADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT 277 (380)
T ss_dssp TCCHHHHHHHHHHC-CSEEEEEE--E---------CCHH-HHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH
T ss_pred cccHHHHHHHHHhc-CCCEEEEe--c---------CcHH-HHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc
Confidence 46788899888876 45655321 0 1233 34556778999887631 11 1123345566555 4
Q ss_pred CCeEEEecccCChHHHHHHHHhcCceEEEeCChHHH
Q 017440 300 KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEI 335 (371)
Q Consensus 300 Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l 335 (371)
+.+|++-|-+.+..++.+++ .+|+|+|+.-++-..
T Consensus 278 ~~pVia~GGI~~~~dv~kal-~~GAdaV~iGr~~l~ 312 (380)
T 1p4c_A 278 GKPVLIDSGFRRGSDIVKAL-ALGAEAVLLGRATLY 312 (380)
T ss_dssp CSCEEECSSCCSHHHHHHHH-HTTCSCEEESHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHH-HhCCcHhhehHHHHH
Confidence 67899888899999998887 699999999887543
No 180
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=32.95 E-value=1.5e+02 Score=21.97 Aligned_cols=52 Identities=12% Similarity=0.167 Sum_probs=33.0
Q ss_pred HHHHHHHHhC--CeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhc
Q 017440 291 GAIKKIKEAK--LCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~~G--l~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~ 344 (371)
++++.+++.+ ..+.+. +-. +.+...+.+ ..|++++++- .+..+.+.+++..+
T Consensus 68 ~~~~~l~~~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 68 EMLDRIKAGGAKPYVIVI-SAFSEMKYFIKAI-ELGVHLFLPKPIEPGRLMETLEDFRH 124 (137)
T ss_dssp HHHHHHHHTTCCCEEEEC-CCCCCHHHHHHHH-HHCCSEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEE-ecCcChHHHHHHH-hCCcceeEcCCCCHHHHHHHHHHHHH
Confidence 5677777664 667777 444 444455554 6899998875 45666666665543
No 181
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=32.84 E-value=95 Score=26.29 Aligned_cols=50 Identities=10% Similarity=0.088 Sum_probs=37.2
Q ss_pred HHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe---CChHHHHHHHHhh
Q 017440 292 AIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV---DLVSEITEAVSDF 342 (371)
Q Consensus 292 ~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT---D~p~~l~~~l~~~ 342 (371)
.++.++++|+++.+- |-+........+..+|++.++. +.|..+.++++++
T Consensus 84 ~L~~L~~~G~~l~I~-T~~~~~~~~~~l~~lgi~~~f~~~k~K~~~l~~~~~~l 136 (211)
T 3ij5_A 84 GIRCLITSDIDVAII-TGRRAKLLEDRANTLGITHLYQGQSDKLVAYHELLATL 136 (211)
T ss_dssp HHHHHHHTTCEEEEE-CSSCCHHHHHHHHHHTCCEEECSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEE-eCCCHHHHHHHHHHcCCchhhcccCChHHHHHHHHHHc
Confidence 788999999999888 7777777777766788887765 4466666666654
No 182
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=32.74 E-value=1.4e+02 Score=25.69 Aligned_cols=65 Identities=12% Similarity=0.019 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 265 DEAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
.+..+.+...|+..+...... .-.+.+.++.+++. +++|.+-|-+++.+++.+++ +.|+||++.=
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~-~~Gadgv~vg 225 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAF-QAGAEAALAA 225 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH-HCCCHHHHHH
Confidence 344555666777766543111 11245678787765 68888877799989998886 6999999863
No 183
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=32.62 E-value=1.1e+02 Score=29.67 Aligned_cols=64 Identities=17% Similarity=0.144 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCceEeccccccc--CChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIF--KNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
..+.+..+...|++.+.++...-. ...+.++.+++. ++.|.+- .+.+.+++..+. +.|+|+|..
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g-~~~t~e~a~~l~-~~G~d~I~v 305 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG-NVATPEGTEALI-KAGADAVKV 305 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC-CcCCHHHHHHHH-HcCCCEEEE
Confidence 445566677888888876543211 134678888888 7887654 567788887775 799999986
No 184
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=32.57 E-value=1.1e+02 Score=30.46 Aligned_cols=56 Identities=21% Similarity=0.214 Sum_probs=39.6
Q ss_pred HHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcC---ceEEEe
Q 017440 269 KVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMG---IEGVIV 329 (371)
Q Consensus 269 ~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~G---VdgIiT 329 (371)
+.+...+++|||+..... ....++.+...+..+.+ ++++.+++.+.. +.| +|.|..
T Consensus 79 dlA~~~gAdGVHLgq~dl--~~~~ar~~lg~~~iiG~--S~ht~eea~~A~-~~G~~~aDYv~~ 137 (540)
T 3nl6_A 79 DVAMAIGADGIHVGQDDM--PIPMIRKLVGPDMVIGW--SVGFPEEVDELS-KMGPDMVDYIGV 137 (540)
T ss_dssp HHHHHTTCSEEEECTTSS--CHHHHHHHHCTTSEEEE--EECSHHHHHHHH-HTCC--CCEEEE
T ss_pred HHHHHcCCCEEEEChhhc--CHHHHHHHhCCCCEEEE--ECCCHHHHHHHH-HcCCCCCCEEEE
Confidence 456778999999876543 44555555555666665 467888887775 689 999986
No 185
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=32.56 E-value=1.5e+02 Score=21.78 Aligned_cols=53 Identities=8% Similarity=0.145 Sum_probs=32.3
Q ss_pred HHHHHHHHhC----CeEEEecccCChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhcc
Q 017440 291 GAIKKIKEAK----LCLVSYGELNNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIKN 345 (371)
Q Consensus 291 ~~v~~~~~~G----l~v~~wgtvn~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~~ 345 (371)
++++.+++.+ ..+.+. +-.+.+...+.+ ..|+++++.- .+..+.+.+++....
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 67 DVIRSLRQNKVANQPKILVV-SGLDKAKLQQAV-TEGADDYLEKPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp HHHHHHHTTTCSSCCEEEEE-CCSCSHHHHHHH-HHTCCEEECSSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcCccCCCeEEEE-eCCChHHHHHHH-HhChHHHhhCCCCHHHHHHHHHHHcCC
Confidence 5667777654 445555 454555555664 6899998875 356666666665543
No 186
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=32.55 E-value=1.1e+02 Score=25.37 Aligned_cols=56 Identities=16% Similarity=0.127 Sum_probs=34.5
Q ss_pred HHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 269 KVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 269 ~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
+.+...|++++++.... ...+.++.++ .++.+.+ ++.+..++.... ..|+|.|..+
T Consensus 80 ~~a~~~gad~v~l~~~~--~~~~~~~~~~-~~~~~~v--~~~t~~e~~~~~-~~g~d~i~~~ 135 (215)
T 1xi3_A 80 DVALAVDADGVQLGPED--MPIEVAKEIA-PNLIIGA--SVYSLEEALEAE-KKGADYLGAG 135 (215)
T ss_dssp HHHHHHTCSEEEECTTS--CCHHHHHHHC-TTSEEEE--EESSHHHHHHHH-HHTCSEEEEE
T ss_pred HHHHHcCCCEEEECCcc--CCHHHHHHhC-CCCEEEE--ecCCHHHHHHHH-hcCCCEEEEc
Confidence 44566788888765332 2344555554 4554443 356677766654 6899999864
No 187
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=32.40 E-value=1.4e+02 Score=28.32 Aligned_cols=40 Identities=20% Similarity=0.112 Sum_probs=29.5
Q ss_pred HHHHHHHHhCCeEEEecccCC-------------h-HHHHHHHHhcCceEEEeCCh
Q 017440 291 GAIKKIKEAKLCLVSYGELNN-------------V-PEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wgtvn~-------------~-~~~~~l~~~~GVdgIiTD~p 332 (371)
.+++++|++|+++..| .-.. . .++ +.+.++|||+|=.|+.
T Consensus 81 ~l~~~i~~~Glk~Giw-~~~g~~~c~~~Pgs~~~~~~d~-~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 81 GLAKKVHALGLKLGIY-STAGTATCAGYPASLGYEDVDA-ADFADWGVDYLKYDNC 134 (417)
T ss_dssp HHHHHHHHTTCEEEEE-EESSSBCTTSCBCCTTCHHHHH-HHHHHTTCCEEEEECC
T ss_pred HHHHHHHHcCCEEEEE-eCCCCchhccCcchHhHHHHHH-HHHHHcCCCEEEECCC
Confidence 6899999999999998 4221 1 123 3345799999999886
No 188
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=32.34 E-value=2.3e+02 Score=26.43 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=54.4
Q ss_pred HHHHHHHHHHCCCCCeEE-EcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc--cc--------CCh--HHHHHH
Q 017440 230 PDAALLIRKLQSTYPVFF-LTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA--IF--------KNP--GAIKKI 296 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~--------~~~--~~v~~~ 296 (371)
++.++.+|+..|++++.. .. .+.+. ...+...|+++|.+.... .. -.| ..+.++
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~V------------~T~e~-A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~ 195 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGNV------------ATYAG-ADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDC 195 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE------------CSHHH-HHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEcCc------------CCHHH-HHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHH
Confidence 356778888777777664 11 12333 344567788887753110 00 012 233333
Q ss_pred HHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChH
Q 017440 297 KEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVS 333 (371)
Q Consensus 297 ~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~ 333 (371)
.+.-.+|.+=|-+.+..++.+++ .+|+|+|+.=++-
T Consensus 196 ~~~~~PVIAdGGI~~~~di~kAL-a~GAd~V~iGr~f 231 (361)
T 3r2g_A 196 SRADRSIVADGGIKTSGDIVKAL-AFGADFVMIGGML 231 (361)
T ss_dssp TTSSSEEEEESCCCSHHHHHHHH-HTTCSEEEESGGG
T ss_pred HHhCCCEEEECCCCCHHHHHHHH-HcCCCEEEEChHH
Confidence 33323787766788999998887 6999999877653
No 189
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=32.31 E-value=2.6e+02 Score=26.31 Aligned_cols=67 Identities=12% Similarity=0.026 Sum_probs=45.4
Q ss_pred HHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC--eEEEec-ccCChHHHHHHHHhcCceEEEeCChHHHHHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL--CLVSYG-ELNNVPEVVYMQRFMGIEGVIVDLVSEITEAV 339 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl--~v~~wg-tvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l 339 (371)
...++.+...|+ ++.+ .+..-+..++++|+ ..++|. .....+++.+++ +.|++.+..|..+.+.++-
T Consensus 71 ~~v~~~l~~~G~-g~~v------as~~E~~~~~~~G~~~~~i~~~g~~k~~~~i~~a~-~~gv~~i~vds~~el~~l~ 140 (425)
T 2qgh_A 71 LSILSLLAHLES-GADC------VSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQAL-KLNILFLNVESFMELKTIE 140 (425)
T ss_dssp HHHHHHHHHTTC-EEEE------SSHHHHHHHHHTTCCGGGEEECCTTCCHHHHHHHH-HTTCSEEEECSHHHHHHHH
T ss_pred HHHHHHHHHcCC-eEEE------eCHHHHHHHHHcCCChhHEEEcCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHH
Confidence 344555566776 5542 26677888888897 345561 234667787775 6899888999998877664
No 190
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=31.77 E-value=1e+02 Score=27.64 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=39.6
Q ss_pred ChHHHHHHHH-h-C-CeEEEecccCChHHHHHHHHhcCceEEEeCC-------hHHHHHHHH
Q 017440 289 NPGAIKKIKE-A-K-LCLVSYGELNNVPEVVYMQRFMGIEGVIVDL-------VSEITEAVS 340 (371)
Q Consensus 289 ~~~~v~~~~~-~-G-l~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~-------p~~l~~~l~ 340 (371)
++.+++.+.+ . + ++|.+=|-+.+++++..++ ++|+|||..+. |..+.+.+.
T Consensus 164 ~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Am-eLGAdgVlVgSAI~~a~dP~~ma~af~ 224 (268)
T 2htm_A 164 TRALLELFAREKASLPPVVVDAGLGLPSHAAEVM-ELGLDAVLVNTAIAEAQDPPAMAEAFR 224 (268)
T ss_dssp THHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHH-HTTCCEEEESHHHHTSSSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHH-HcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 6888899988 3 4 7888777799999998886 79999998876 665544443
No 191
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=31.55 E-value=2.3e+02 Score=23.69 Aligned_cols=113 Identities=11% Similarity=0.160 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCC---CcccCCCCcccHHHHHHHHHhCCCceEeccc
Q 017440 207 LEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGG---AQTCTDVRRSSLDEAIKVCLAGGLQGIVSEV 283 (371)
Q Consensus 207 ~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 283 (371)
..++.+.+.+.|.. -+.+ -+++.++.+++.. +.|+.-..... ...+.. .+ .+.++.+...|++.+++..
T Consensus 25 ~~~~a~~~~~~Ga~-~i~~--~~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~---~~-~~~i~~~~~~Gad~v~l~~ 96 (223)
T 1y0e_A 25 MSKMALAAYEGGAV-GIRA--NTKEDILAIKETV-DLPVIGIVKRDYDHSDVFIT---AT-SKEVDELIESQCEVIALDA 96 (223)
T ss_dssp HHHHHHHHHHHTCS-EEEE--ESHHHHHHHHHHC-CSCEEEECBCCCTTCCCCBS---CS-HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHCCCe-eecc--CCHHHHHHHHHhc-CCCEEeeeccCCCccccccC---Cc-HHHHHHHHhCCCCEEEEee
Confidence 34455555565543 2333 3678888888875 67763222110 000100 12 2334556678898887665
Q ss_pred ccccCC-----hHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 284 RAIFKN-----PGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 284 ~~~~~~-----~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
... .+ .++++.+++. |+.+.+ .+.+.++..++. +.|+|.|.+..
T Consensus 97 ~~~-~~p~~~~~~~i~~~~~~~~~~~v~~--~~~t~~e~~~~~-~~G~d~i~~~~ 147 (223)
T 1y0e_A 97 TLQ-QRPKETLDELVSYIRTHAPNVEIMA--DIATVEEAKNAA-RLGFDYIGTTL 147 (223)
T ss_dssp SCS-CCSSSCHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHH-HTTCSEEECTT
T ss_pred ecc-cCcccCHHHHHHHHHHhCCCceEEe--cCCCHHHHHHHH-HcCCCEEEeCC
Confidence 432 12 4789999999 888865 467777877764 79999998643
No 192
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=31.51 E-value=58 Score=30.87 Aligned_cols=43 Identities=14% Similarity=-0.027 Sum_probs=29.5
Q ss_pred hHHHHHHHHhCCeEEEeccc------------CChHHHHHHHHhcCceEEEeCCh
Q 017440 290 PGAIKKIKEAKLCLVSYGEL------------NNVPEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtv------------n~~~~~~~l~~~~GVdgIiTD~p 332 (371)
+.+++++|++|+++..|... +-.....+.+.++|||+|=.|+.
T Consensus 77 ~~l~~~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~ 131 (397)
T 3a5v_A 77 KPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTWAKWGIDYLKYDNC 131 (397)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHHTCCEEEEECT
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccCCCHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 46789999999999888311 11222223445899999999984
No 193
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=31.50 E-value=98 Score=29.19 Aligned_cols=62 Identities=18% Similarity=0.147 Sum_probs=42.3
Q ss_pred HHHHHHHhCCCceEecccccc--cCChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 266 EAIKVCLAGGLQGIVSEVRAI--FKNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~~~--~~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
+.++.+...|++.+.++...- ....+.++.+++. +++|.+- .+.+.+++..+. +.|+|+|+.
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~-~v~~~~~a~~a~-~~Gad~I~v 221 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG-NIVTKEAALDLI-SVGADCLKV 221 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHH-TTTCSEEEE
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc-CCCcHHHHHHHH-hcCCCEEEE
Confidence 334455667888876532211 0123567888888 8999875 677888887775 799999988
No 194
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=31.33 E-value=3.1e+02 Score=25.17 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=57.3
Q ss_pred HHHHHHHHHHCC-CCCeEEEcCCCCcccCCCCcccHHHHHHHHH---hCCCceEecccccc---------cCChHHHHHH
Q 017440 230 PDAALLIRKLQS-TYPVFFLTNGGAQTCTDVRRSSLDEAIKVCL---AGGLQGIVSEVRAI---------FKNPGAIKKI 296 (371)
Q Consensus 230 ~~~l~~l~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~---------~~~~~~v~~~ 296 (371)
.++++.+++..+ ++|+++-+.... +.+- ..+..+.+++++ .. ++.+++..... -....+++.+
T Consensus 197 ~eiv~aVr~avg~d~pv~vRls~~~--~~~~-g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~i 272 (343)
T 3kru_A 197 IEVIDEVRKNWPENKPIFVRVSADD--YMEG-GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETI 272 (343)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCC--SSTT-SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHhcCCccCCeEEEeechh--hhcc-CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHH
Confidence 456666666654 567766443311 0000 012344444443 44 67666531110 0123566666
Q ss_pred HHh-CCeEEEecccCChHHHHHHHHhcC-ceEEEeCChHHH
Q 017440 297 KEA-KLCLVSYGELNNVPEVVYMQRFMG-IEGVIVDLVSEI 335 (371)
Q Consensus 297 ~~~-Gl~v~~wgtvn~~~~~~~l~~~~G-VdgIiTD~p~~l 335 (371)
+++ ++.|.+-|-+++++++.+++ +.| +|+|.-=++-..
T Consensus 273 r~~~~iPVi~~Ggi~t~e~Ae~~l-~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 273 KKRCNIKTSAVGLITTQELAEEIL-SNERADLVALGRELLR 312 (343)
T ss_dssp HHHHTCEEEEESSCCCHHHHHHHH-HTTSCSEEEESHHHHH
T ss_pred HHhcCcccceeeeeeHHHHHHHHH-hchhhHHHHHHHHHhc
Confidence 665 78888877788999999987 466 999987765443
No 195
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=31.07 E-value=81 Score=25.90 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC---ChHHHHHHHHhh
Q 017440 291 GAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD---LVSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD---~p~~l~~~l~~~ 342 (371)
..++.++++|+++.+- |-+........+..+|++.++.. .|..+..+++++
T Consensus 53 ~~l~~L~~~g~~~~i~-T~~~~~~~~~~~~~lgl~~~f~~~~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 53 QGIKMLIASGVTTAII-SGRKTAIVERRAKSLGIEHLFQGREDKLVVLDKLLAEL 106 (189)
T ss_dssp HHHHHHHHTTCEEEEE-CSSCCHHHHHHHHHHTCSEEECSCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEE-ECcChHHHHHHHHHcCCHHHhcCcCChHHHHHHHHHHc
Confidence 3788889999988888 77776666666667888777654 455555555544
No 196
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=30.61 E-value=1.2e+02 Score=27.46 Aligned_cols=73 Identities=10% Similarity=-0.080 Sum_probs=45.1
Q ss_pred HHHHHhCCCceEecccccc---------cCChHHHHHHHHhCCeEEEeccc---------CCh----HHHHHHHHhcCce
Q 017440 268 IKVCLAGGLQGIVSEVRAI---------FKNPGAIKKIKEAKLCLVSYGEL---------NNV----PEVVYMQRFMGIE 325 (371)
Q Consensus 268 ~~~~~~~~~~~v~~~~~~~---------~~~~~~v~~~~~~Gl~v~~wgtv---------n~~----~~~~~l~~~~GVd 325 (371)
++.+.+.|++++.+....- ..-.++++.+++.|+.+.+| .. .++ .+..+...++|+|
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~-~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD 192 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIE-PVVRPPRCGDKFDREQAIIDAAKELGDSGAD 192 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEE-EEECCCSSCSCCCHHHHHHHHHHHHTTSSCS
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEE-EECCCCccccCCChhHHHHHHHHHHHHcCCC
Confidence 4556778988876322111 01135678889999999888 43 112 2212223469999
Q ss_pred EEEeCCh-------HHHHHHHHh
Q 017440 326 GVIVDLV-------SEITEAVSD 341 (371)
Q Consensus 326 gIiTD~p-------~~l~~~l~~ 341 (371)
.|-+..| +.+.++++.
T Consensus 193 ~iKv~~~~~~~g~~~~~~~vv~~ 215 (304)
T 1to3_A 193 LYKVEMPLYGKGARSDLLTASQR 215 (304)
T ss_dssp EEEECCGGGGCSCHHHHHHHHHH
T ss_pred EEEeCCCcCCCCCHHHHHHHHHh
Confidence 9989887 666666665
No 197
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=30.41 E-value=1.9e+02 Score=24.33 Aligned_cols=93 Identities=15% Similarity=0.009 Sum_probs=52.1
Q ss_pred ecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccC-ChHHHHHHHHhCCeEE
Q 017440 226 SSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEAKLCLV 304 (371)
Q Consensus 226 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~Gl~v~ 304 (371)
.+|-+..++.+++..|+.++.+-..- .|. .....+.+...|++.+.++...-.- -...++.+++.|..++
T Consensus 40 ~~~G~~~i~~l~~~~p~~~v~lD~kl-----~di----p~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~ 110 (216)
T 1q6o_A 40 VGEGVRAVRDLKALYPHKIVLADAKI-----ADA----GKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQ 110 (216)
T ss_dssp HHHCTHHHHHHHHHCTTSEEEEEEEE-----CSC----HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHhCHHHHHHHHHhCCCCeEEEEEEe-----ccc----HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCce
Confidence 46677789999998777776543321 111 1222345667899988877543100 1356677888898875
Q ss_pred Ee-c-ccCChHHHHHHHHhcCceEEEe
Q 017440 305 SY-G-ELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 305 ~w-g-tvn~~~~~~~l~~~~GVdgIiT 329 (371)
+- - .++ ......+ ...|++-++.
T Consensus 111 ~~ll~~~t-~~~~~~l-~~~~~~~~vl 135 (216)
T 1q6o_A 111 IELTGYWT-WEQAQQW-RDAGIGQVVY 135 (216)
T ss_dssp EEECSCCC-HHHHHHH-HHTTCCEEEE
T ss_pred eeeeeCCC-hhhHHHH-HhcCcHHHHH
Confidence 31 0 122 2333344 2456555554
No 198
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=30.40 E-value=1.7e+02 Score=21.78 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=33.4
Q ss_pred HHHHHHHHhC--CeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhc
Q 017440 291 GAIKKIKEAK--LCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~~G--l~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~ 344 (371)
++++.+++.+ .++.+. |- .+.+...+.+ ..|++++++- .+..+.+.+++...
T Consensus 69 ~~~~~l~~~~~~~~ii~~-s~~~~~~~~~~~~-~~ga~~~l~KP~~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 69 ELLETLVKRGFHLPTIVM-ASSSDIPTAVRAM-RASAADFIEKPFIEHVLVHDVQQIIN 125 (136)
T ss_dssp HHHHHHHHTTCCCCEEEE-ESSCCHHHHHHHH-HTTCSEEEESSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCEEEE-EcCCCHHHHHHHH-HcChHHheeCCCCHHHHHHHHHHHHh
Confidence 5777777764 667766 44 3444555564 6999999885 45666666655443
No 199
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=30.33 E-value=1.7e+02 Score=21.81 Aligned_cols=77 Identities=14% Similarity=0.123 Sum_probs=41.6
Q ss_pred HHHHHHHHhCCCceEeccccccc-CChHHHHHHHHh--CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIF-KNPGAIKKIKEA--KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEA 338 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~~~--Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~ 338 (371)
.++++.+.....+.+.++. ..- -.-++++.+++. +.++.+. +-. +.+.....+ ..|++++++- .+..+.+.
T Consensus 38 ~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~l-s~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~ 114 (142)
T 2qxy_A 38 QEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVL-SAYVDKDLIINSV-KAGAVDYILKPFRLDYLLER 114 (142)
T ss_dssp HHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEE-ESCCCHHHHHHHH-HHTCSCEEESSCCHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEE-ECCCCHHHHHHHH-HCCcceeEeCCCCHHHHHHH
Confidence 4444444444444444443 110 012456666665 4677777 443 444455554 6899988875 35666666
Q ss_pred HHhhhc
Q 017440 339 VSDFIK 344 (371)
Q Consensus 339 l~~~~~ 344 (371)
++....
T Consensus 115 i~~~~~ 120 (142)
T 2qxy_A 115 VKKIIS 120 (142)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665544
No 200
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=30.24 E-value=1.6e+02 Score=21.56 Aligned_cols=78 Identities=6% Similarity=-0.060 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCceEecccccccC-ChHHHHHHHHh----CCeEEEecccCChHHHHHHHHhcCceEEEeC--ChHHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEA----KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD--LVSEIT 336 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~----Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD--~p~~l~ 336 (371)
..++++.+.....+.+.++....-. .-++++.+++. +.++.+. +-....+....+ ..|++++++- .+..+.
T Consensus 36 ~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~-s~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~ 113 (133)
T 3nhm_A 36 GASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFV-SGYAPRTEGPAD-QPVPDAYLVKPVKPPVLI 113 (133)
T ss_dssp HHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEE-ESCCC-----TT-SCCCSEEEESSCCHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEE-eCCCcHhHHHHh-hcCCceEEeccCCHHHHH
Confidence 4455555555556655555432111 23577778775 5677777 554433334443 6899998875 345555
Q ss_pred HHHHhhh
Q 017440 337 EAVSDFI 343 (371)
Q Consensus 337 ~~l~~~~ 343 (371)
+.++...
T Consensus 114 ~~i~~~l 120 (133)
T 3nhm_A 114 AQLHALL 120 (133)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 201
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=29.83 E-value=1.6e+02 Score=21.48 Aligned_cols=54 Identities=13% Similarity=0.221 Sum_probs=32.7
Q ss_pred hHHHHHHHHhC--CeEEEecccC-ChHHHHHHHHhcCceEEEeC---ChHHHHHHHHhhhcc
Q 017440 290 PGAIKKIKEAK--LCLVSYGELN-NVPEVVYMQRFMGIEGVIVD---LVSEITEAVSDFIKN 345 (371)
Q Consensus 290 ~~~v~~~~~~G--l~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD---~p~~l~~~l~~~~~~ 345 (371)
-++++.+++.+ .++.+. |-. +.+...+.+ ..|++++++- .++.+.+.++.....
T Consensus 67 ~~~~~~l~~~~~~~~ii~~-t~~~~~~~~~~~~-~~g~~~~l~KP~~~~~~l~~~i~~~l~~ 126 (130)
T 3eod_A 67 LKLLEHIRNRGDQTPVLVI-SATENMADIAKAL-RLGVEDVLLKPVKDLNRLREMVFACLYP 126 (130)
T ss_dssp HHHHHHHHHTTCCCCEEEE-ECCCCHHHHHHHH-HHCCSEEEESCC---CHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCCCCCEEEE-EcCCCHHHHHHHH-HcCCCEEEeCCCCcHHHHHHHHHHHhch
Confidence 35677777764 567776 443 444445554 6899998875 346667666665543
No 202
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=29.68 E-value=38 Score=29.77 Aligned_cols=87 Identities=8% Similarity=-0.031 Sum_probs=50.8
Q ss_pred cCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHh-------
Q 017440 227 SFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA------- 299 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~------- 299 (371)
+|-+..++.+|+..+. .+-++.. .....++.+.+.|++++.++.....-..+.++.+++.
T Consensus 57 t~G~~~v~~lr~~~~~-DvhLMv~------------~p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~ 123 (237)
T 3cu2_A 57 TVGAIGIKYFPTHCFK-DVHLMVR------------NQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQ 123 (237)
T ss_dssp CBCTHHHHTSCTTSEE-EEEEECS------------CHHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTE
T ss_pred hhhHHHHHHHhhhCCC-CeEEEEE------------CHHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccc
Confidence 5667777777765442 2222222 2345567778899999776655422234688888889
Q ss_pred --CCeEEEecccCChHHHHHHHHhcCceEE
Q 017440 300 --KLCLVSYGELNNVPEVVYMQRFMGIEGV 327 (371)
Q Consensus 300 --Gl~v~~wgtvn~~~~~~~l~~~~GVdgI 327 (371)
|.++.+--...++.+..+-+ .-++|.|
T Consensus 124 ~~g~~~gv~l~p~Tp~~~l~~~-l~~~D~v 152 (237)
T 3cu2_A 124 VYPVLIGACLCPETPISELEPY-LDQIDVI 152 (237)
T ss_dssp EEECEEEEEECTTSCGGGGTTT-TTTCSEE
T ss_pred cCCceEEEEEeCCChHHHHHHH-hhcCcee
Confidence 88887651223443332221 2478877
No 203
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=29.16 E-value=3.8e+02 Score=25.44 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCe--EEEe-cccCChHHHHHHHHhcCceEEEeCChHHHHHHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLC--LVSY-GELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVS 340 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~--v~~w-gtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~ 340 (371)
...++.....|+ ++.+ .+..-+..+.++|+. ..+| |...+++++..++ +.|+..+..|..+++..+.+
T Consensus 90 ~~v~~~l~~~G~-g~dv------aS~~E~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 160 (441)
T 3n2b_A 90 LGVLNTLARLGS-GFDI------VSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRAL-QLKIKCFNVESEPELQRLNK 160 (441)
T ss_dssp HHHHHHHHHTTC-EEEE------SSHHHHHHHHHTTCCGGGEEECCTTCCHHHHHHHH-HTTCSEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHcCC-cEEE------eCHHHHHHHHHcCCCcccEEEcCCCCCHHHHHHHH-HCCCCEEEEcCHHHHHHHHH
Confidence 334455556665 4432 255566677778862 2344 1234566676665 57887777888887776543
No 204
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=28.88 E-value=2.2e+02 Score=26.93 Aligned_cols=62 Identities=16% Similarity=0.242 Sum_probs=40.1
Q ss_pred HHHHhCCCceEecccc-------c----c-cCChHHHHHHH----HhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 269 KVCLAGGLQGIVSEVR-------A----I-FKNPGAIKKIK----EAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 269 ~~~~~~~~~~v~~~~~-------~----~-~~~~~~v~~~~----~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.+...|+++|.+... . . ..+-..+..+. +.+++|++-|-+.+..++.+++ .+|+|+|+.-.
T Consensus 199 ~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kal-alGAd~V~vGt 276 (400)
T 3ffs_A 199 KELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL-AVGASSVMIGS 276 (400)
T ss_dssp HHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH-TTTCSEEEECG
T ss_pred HHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHH-HcCCCEEEECh
Confidence 4456778888776311 0 0 01112334443 3588999987788999998886 79999998543
No 205
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=28.85 E-value=2.5e+02 Score=23.23 Aligned_cols=123 Identities=11% Similarity=0.056 Sum_probs=69.7
Q ss_pred CceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCC-----HHHHHHHHHHCCCCCeEEEcCCCCcccC
Q 017440 183 SVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQ-----PDAALLIRKLQSTYPVFFLTNGGAQTCT 257 (371)
Q Consensus 183 ~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~-----~~~l~~l~~~~p~~~~~~l~~~~~~~~~ 257 (371)
+..+.+++|..+.. +.+++...+.|.. .+++.... .+.++.+++. +.+.+.-....
T Consensus 53 ~~~i~~~~~~~~~~-----------~~~~~~~~~~Gad-~v~v~~~~~~~~~~~~~~~~~~~--g~~~~v~~~~~----- 113 (211)
T 3f4w_A 53 HKEVLADAKIMDGG-----------HFESQLLFDAGAD-YVTVLGVTDVLTIQSCIRAAKEA--GKQVVVDMICV----- 113 (211)
T ss_dssp TSEEEEEEEECSCH-----------HHHHHHHHHTTCS-EEEEETTSCHHHHHHHHHHHHHH--TCEEEEECTTC-----
T ss_pred CCEEEEEEEeccch-----------HHHHHHHHhcCCC-EEEEeCCCChhHHHHHHHHHHHc--CCeEEEEecCC-----
Confidence 67788999986431 1223444555644 56666654 2344444443 34444311111
Q ss_pred CCCcccHHHHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 258 DVRRSSLDEAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
.+..+.++.+...|++.+.+.... .....+.++.+++. ++.+.+=|-++ .+...+++ +.|+|+++.=
T Consensus 114 ----~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~-~~Gad~vvvG 187 (211)
T 3f4w_A 114 ----DDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYA-LLGPDVVIVG 187 (211)
T ss_dssp ----SSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHH-TTCCSEEEEC
T ss_pred ----CCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHH-HcCCCEEEEC
Confidence 123333455666777776543210 01245788888886 57776655576 67777775 7999999864
No 206
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=28.55 E-value=3.4e+02 Score=25.40 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=63.4
Q ss_pred HHHHHHhcCCCCeEEecCC--HHHHHHHHHHCC-CCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccccc
Q 017440 211 LKVVFEHAQGRPIMFSSFQ--PDAALLIRKLQS-TYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIF 287 (371)
Q Consensus 211 l~~l~~~~~~~~v~i~Sf~--~~~l~~l~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 287 (371)
.++.++++ .++++.+-+ ...++.+++..+ ++.+.+.+... .....++.....|. ++.+
T Consensus 9 ~~l~~~~~--tP~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan----------~~~~v~~~l~~~G~-g~~v------ 69 (428)
T 2j66_A 9 TALTKRFE--TPFYLYDGDFIEAHYRQLRSRTNPAIQFYLSLKAN----------NNIHLAKLFRQWGL-GVEV------ 69 (428)
T ss_dssp HHHHHHSC--SSEEEEEHHHHHHHHHHHHHTSCTTEEEEEEGGGC----------CCHHHHHHHHHTTC-EEEE------
T ss_pred HHHHHhhC--CCEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeeeC----------CCHHHHHHHHHcCC-eEEE------
Confidence 33445554 345553322 233445555555 44444444332 22344555556663 4432
Q ss_pred CChHHHHHHHHhCC---eEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHH
Q 017440 288 KNPGAIKKIKEAKL---CLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAV 339 (371)
Q Consensus 288 ~~~~~v~~~~~~Gl---~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l 339 (371)
.+..-+..++++|+ .++..|...+.+++..++ +.|+..+..|....+.++-
T Consensus 70 as~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~-~~~v~~~~vds~~el~~l~ 123 (428)
T 2j66_A 70 ASAGELALARHAGFSAENIIFSGPGKKRSELEIAV-QSGIYCIIAESVEELFYIE 123 (428)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCSCCCHHHHHHHH-HHTCSEEEECSHHHHHHHH
T ss_pred eCHHHHHHHHHcCCCcCeEEEeCCCCCHHHHHHHH-HCCCCEEEECCHHHHHHHH
Confidence 25667888889997 367664445667787775 6888779999998877654
No 207
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=28.51 E-value=1.4e+02 Score=24.07 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=31.8
Q ss_pred ChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC---ChHHHHHHHHhh
Q 017440 289 NPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD---LVSEITEAVSDF 342 (371)
Q Consensus 289 ~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD---~p~~l~~~l~~~ 342 (371)
+.+.++.++++|+++.+- |-+........+..+|++.++.. .|..+.++++++
T Consensus 40 ~~~~l~~L~~~G~~~~i~-Tg~~~~~~~~~~~~lgl~~~~~~~k~k~~~~~~~~~~~ 95 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVL-SGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQA 95 (180)
T ss_dssp HHHHHHHHHHTTCEEEEE-ESCCCHHHHHHHHHHTCCEEEESCSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCeEEEE-eCCCcHHHHHHHHHcCCceeecCCCCcHHHHHHHHHHc
Confidence 345777777788777777 65555555555556777766532 344444455443
No 208
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=28.41 E-value=2e+02 Score=21.92 Aligned_cols=79 Identities=10% Similarity=0.092 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCceEecccccccC-ChHHHHHHHHh--CCeEEEecccC-ChHHHHHHHHhcC-ceEEEeC--ChHHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEA--KLCLVSYGELN-NVPEVVYMQRFMG-IEGVIVD--LVSEIT 336 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~--Gl~v~~wgtvn-~~~~~~~l~~~~G-VdgIiTD--~p~~l~ 336 (371)
..++++.+.....+.+.++....-. .-++++.+++. ...+.+. |-. +.+...+.+ ..| ++++++- .+..+.
T Consensus 47 ~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~~l~KP~~~~~l~ 124 (153)
T 3hv2_A 47 ATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILL-TGDPDLKLIAKAI-NEGEIYRYLSKPWDDQELL 124 (153)
T ss_dssp HHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEE-CCCCCHHHHHHHH-HTTCCSEEECSSCCHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEE-ECCCCHHHHHHHH-hCCCcceEEeCCCCHHHHH
Confidence 3444444444445544444332111 13566777765 4677777 544 444455554 688 9988876 345555
Q ss_pred HHHHhhhc
Q 017440 337 EAVSDFIK 344 (371)
Q Consensus 337 ~~l~~~~~ 344 (371)
..++...+
T Consensus 125 ~~i~~~l~ 132 (153)
T 3hv2_A 125 LALRQALE 132 (153)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554443
No 209
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=28.30 E-value=1.7e+02 Score=30.04 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=34.0
Q ss_pred CCCCcccHHHHHHHHHhCCCceEecccccc-------------cCC--------hHHHHHHHHhCCeEEEe
Q 017440 257 TDVRRSSLDEAIKVCLAGGLQGIVSEVRAI-------------FKN--------PGAIKKIKEAKLCLVSY 306 (371)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~--------~~~v~~~~~~Gl~v~~w 306 (371)
.++....+.+.++.++.+|+..++++..+. ..+ +.+++.+|++|++...|
T Consensus 341 ~d~~e~~i~~~ad~aa~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~vh~~GmkfGLW 411 (729)
T 4fnq_A 341 FDFNEEKLVNIAKTEAELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQVNELGMQFGLW 411 (729)
T ss_dssp TCCCHHHHHHHHHHHHHHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHHHHhcCccEEEEcceeecCCCCCcccCCcEEEChhhcCccHHHHHHHHHHCCCEEEEE
Confidence 344434556666777788888777664321 111 36999999999999999
No 210
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=28.22 E-value=1.2e+02 Score=25.11 Aligned_cols=67 Identities=13% Similarity=-0.012 Sum_probs=37.1
Q ss_pred cHHHHHHHHHhCC--CceEeccccc-ccCChHHHHHHHHh--CCeEEEecccCC-hHHHHHHHHhcCceEEEe
Q 017440 263 SLDEAIKVCLAGG--LQGIVSEVRA-IFKNPGAIKKIKEA--KLCLVSYGELNN-VPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 263 ~~~~~~~~~~~~~--~~~v~~~~~~-~~~~~~~v~~~~~~--Gl~v~~wgtvn~-~~~~~~l~~~~GVdgIiT 329 (371)
++++.++.++..+ ++.+.+.... ....+..++.+++. +..+.+---+.| ++.+.+...+.|+|+|+.
T Consensus 11 ~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~v 83 (207)
T 3ajx_A 11 STEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTV 83 (207)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEE
Confidence 4556666655443 3555443321 11246788888887 777664112334 455334344789999874
No 211
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=27.98 E-value=1.4e+02 Score=24.26 Aligned_cols=51 Identities=8% Similarity=0.025 Sum_probs=34.2
Q ss_pred HHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe---CChHHHHHHHHhh
Q 017440 291 GAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV---DLVSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT---D~p~~l~~~l~~~ 342 (371)
..++.++++|+++++- |-+........+..+|++.++. +.|..+.++++++
T Consensus 60 ~~l~~L~~~g~~v~iv-T~~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~ 113 (188)
T 2r8e_A 60 YGIRCALTSDIEVAII-TGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKL 113 (188)
T ss_dssp HHHHHHHTTTCEEEEE-CSSCCHHHHHHHHHHTCCEEECSCSCSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEE-eCCChHHHHHHHHHcCCceeecCCCCCHHHHHHHHHHc
Confidence 3688888888888877 6666666666655678777665 3455666666554
No 212
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=27.98 E-value=37 Score=31.01 Aligned_cols=86 Identities=13% Similarity=0.025 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHh--CCeEEEe
Q 017440 229 QPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA--KLCLVSY 306 (371)
Q Consensus 229 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~--Gl~v~~w 306 (371)
+++.++.+++.. .+|+...... ..+. ..+.+...|++.|.. ......+++++.++++ |+.+.+
T Consensus 66 ~~~~i~~i~~~v-~iPvl~k~~i----------~~id-e~qil~aaGAD~Id~--s~~~~~~~li~~i~~~~~g~~vvv- 130 (297)
T 4adt_A 66 DPLKIEEIRKCI-SINVLAKVRI----------GHFV-EAQILEELKVDMLDE--SEVLTMADEYNHINKHKFKTPFVC- 130 (297)
T ss_dssp CHHHHHHHHTTC-CSEEEEEEET----------TCHH-HHHHHHHTTCSEEEE--ETTSCCSCSSCCCCGGGCSSCEEE-
T ss_pred CHHHHHHHHHhc-CCCEEEeccC----------CcHH-HHHHHHHcCCCEEEc--CCCCCHHHHHHHHHhcCCCCeEEE-
Confidence 678888888764 6787654321 1222 234455789998832 1112345778888884 566655
Q ss_pred cccCChHHHHHHHHhcCceEEEeCC
Q 017440 307 GELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 307 gtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.+.+.++..+.+ ..|+|.|.++.
T Consensus 131 -~v~~~~Ea~~a~-~~Gad~I~v~g 153 (297)
T 4adt_A 131 -GCTNLGEALRRI-SEGASMIRTKG 153 (297)
T ss_dssp -EESSHHHHHHHH-HHTCSEEEECC
T ss_pred -EeCCHHHHHHHH-hCCCCEEEECC
Confidence 477888887775 68999999983
No 213
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=27.83 E-value=1.5e+02 Score=24.61 Aligned_cols=64 Identities=14% Similarity=0.071 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCCceEecccccccCChHHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.+..+.+...|++.+....... ...+.++.+++. ++.+.+- ++.+.++..... +.|+|.|+...
T Consensus 25 ~~~~~~~~~~G~~~iev~~~~~-~~~~~i~~ir~~~~~~~~ig~~-~v~~~~~~~~a~-~~Gad~iv~~~ 91 (205)
T 1wa3_A 25 KEKALAVFEGGVHLIEITFTVP-DADTVIKELSFLKEKGAIIGAG-TVTSVEQCRKAV-ESGAEFIVSPH 91 (205)
T ss_dssp HHHHHHHHHTTCCEEEEETTST-THHHHHHHTHHHHHTTCEEEEE-SCCSHHHHHHHH-HHTCSEEECSS
T ss_pred HHHHHHHHHCCCCEEEEeCCCh-hHHHHHHHHHHHCCCCcEEEec-ccCCHHHHHHHH-HcCCCEEEcCC
Confidence 3344555667787776544321 113457777765 4667776 777888887775 68999996543
No 214
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=27.63 E-value=2.3e+02 Score=24.09 Aligned_cols=67 Identities=21% Similarity=0.199 Sum_probs=45.3
Q ss_pred cHHHHHHHHHhCCCceEecccc-----cccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhc---CceEEEeC
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVR-----AIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFM---GIEGVIVD 330 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~---GVdgIiTD 330 (371)
+..+..+.+...|++.+.+... ..-.+.+.++.+.+. +++|.+-|-+++.+++.+++ +. |+||++.=
T Consensus 147 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~-~~~~~Gadgv~vG 222 (244)
T 1vzw_A 147 DLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIA-GLVPAGVEGAIVG 222 (244)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHH-TTGGGTEEEEEEC
T ss_pred CHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-hhccCCCceeeee
Confidence 3445556666778775543311 011355677777765 68898888899989998886 67 99999864
No 215
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=27.61 E-value=3.1e+02 Score=25.71 Aligned_cols=49 Identities=20% Similarity=0.191 Sum_probs=29.5
Q ss_pred ChHHHHHHHHhCC---eEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHH
Q 017440 289 NPGAIKKIKEAKL---CLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEA 338 (371)
Q Consensus 289 ~~~~v~~~~~~Gl---~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~ 338 (371)
+..-+..++++|+ .++.+|.....+++..++ +.|+..+..|..+.+.++
T Consensus 91 s~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~-~~~i~~~~vds~~el~~l 142 (434)
T 1twi_A 91 SGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGI-EANIRAFNVDSISELILI 142 (434)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHH-HTTCSEEEECSHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcEEEECCCCCHHHHHHHH-HCCCCEEEECCHHHHHHH
Confidence 4455666667775 355554334556666654 577756777777776554
No 216
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=27.55 E-value=1.4e+02 Score=22.23 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=28.7
Q ss_pred HHHHHHHH--h--CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhh
Q 017440 291 GAIKKIKE--A--KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~--~--Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~ 342 (371)
++++.+++ . ...|.+. +-. +.+.....+ ..|++++++- .+..+.+.++..
T Consensus 68 ~~~~~l~~~~~~~~~pii~~-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~ 124 (142)
T 3cg4_A 68 DTIRAILDNSLEQGIAIVML-TAKNAPDAKMIGL-QEYVVDYITKPFDNEDLIEKTTFF 124 (142)
T ss_dssp HHHHHHHHTTCCTTEEEEEE-ECTTCCCCSSTTG-GGGEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCCEEEE-ECCCCHHHHHHHH-hcCccEEEeCCCCHHHHHHHHHHH
Confidence 56777776 2 3566666 433 233333443 6899998876 245555555544
No 217
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=27.51 E-value=1.5e+02 Score=25.94 Aligned_cols=66 Identities=14% Similarity=0.093 Sum_probs=44.7
Q ss_pred HHHHHHHHH----hCCCceEecccccccCChHHHHHHHHhC--CeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 264 LDEAIKVCL----AGGLQGIVSEVRAIFKNPGAIKKIKEAK--LCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 264 ~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~~~~~~G--l~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.+.+..++. -++...+.+.+.....++++++++++.. +++.+=|-+.++++++++. . |+|+|++-.
T Consensus 144 ~e~iaa~A~~a~~~~g~~~vY~e~sG~~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~-~-gAD~VVVGS 215 (235)
T 3w01_A 144 TEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMA-A-IADTIIVGD 215 (235)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHH-T-TSSEEEECT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCcCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHH-c-CCCEEEECC
Confidence 455555543 2355555544433345789999999874 6766544699999998875 4 999998754
No 218
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=27.49 E-value=2e+02 Score=21.77 Aligned_cols=54 Identities=13% Similarity=0.068 Sum_probs=31.0
Q ss_pred hHHHHHHHHh--CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhcc
Q 017440 290 PGAIKKIKEA--KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIKN 345 (371)
Q Consensus 290 ~~~v~~~~~~--Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~~ 345 (371)
-++++.+++. +.++.+. +-. +.+.....+ ..|++++++- .+..+.+.++...+.
T Consensus 66 ~~~~~~l~~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 66 IDGLVRLKRFDPSNAVALI-SGETDHELIRAAL-EAGADGFIPKSADPQVLIHAVSLILEG 124 (154)
T ss_dssp HHHHHHHHHHCTTSEEEEC------CHHHHHHH-HTTCCBBCCTTSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCeEEEE-eCCCCHHHHHHHH-HccCCEEEeCCCCHHHHHHHHHHHHcC
Confidence 3566777665 4677776 443 334445554 6999988775 345666666655443
No 219
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=27.46 E-value=1.4e+02 Score=26.48 Aligned_cols=141 Identities=10% Similarity=0.063 Sum_probs=83.5
Q ss_pred CCccCHHHHHHhcC--CCceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCC------CCeEEecCCHHHHHHHHHH
Q 017440 168 TPLCTLQEAFEKVD--QSVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQG------RPIMFSSFQPDAALLIRKL 239 (371)
Q Consensus 168 ~~iptL~evL~~~~--~~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~------~~v~i~Sf~~~~l~~l~~~ 239 (371)
.++..|.+.+.... +...+.-|+|..++....-. . . ...+.+.. +.|.. +.-+|+. +.+.|..+++.
T Consensus 28 ~p~~~~~~~l~~~~~~~~~~iIAEiKraSPSkg~i~-~-d-p~~iA~~~-~~GA~aiSVLTd~~~F~G-s~~~L~~vr~~ 102 (258)
T 4a29_A 28 RPIISLNERILEFNKRNITAIIAVYERKSPSGLDVE-R-D-PIEYAKFM-ERYAVGLSITTEEKYFNG-SYETLRKIASS 102 (258)
T ss_dssp SCCCCHHHHHHHHHHTTCCCEEEEECSBCTTSCBCC-C-C-HHHHHHHH-TTTCSEEEEECCSTTTCC-CHHHHHHHHTT
T ss_pred CCccCHHHHHHHHhhCCCcEEEEEEecCCCCCCCcc-C-C-HHHHHHHH-hCCCeEEEEeCCCCCCCC-CHHHHHHHHHh
Confidence 35667888887654 57889999997554311100 0 0 11222322 23321 2222221 45677777764
Q ss_pred CCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCC----hHHHHHHHHhCCeEEEecccCChHHH
Q 017440 240 QSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKN----PGAIKKIKEAKLCLVSYGELNNVPEV 315 (371)
Q Consensus 240 ~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~v~~~~~~Gl~v~~wgtvn~~~~~ 315 (371)
. ++|+. ..+ +-...+ -+..++..|++.|.+-...+ + .++++.+++.|+.+.+= |.+.+++
T Consensus 103 v-~lPvL--rKD-------Fiid~y--QI~eAr~~GADaILLI~a~L--~~~~l~~l~~~A~~lGl~~LvE--Vh~~~El 166 (258)
T 4a29_A 103 V-SIPIL--MSD-------FIVKES--QIDDAYNLGADTVLLIVKIL--TERELESLLEYARSYGMEPLIL--INDENDL 166 (258)
T ss_dssp C-SSCEE--EES-------CCCSHH--HHHHHHHHTCSEEEEEGGGS--CHHHHHHHHHHHHHTTCCCEEE--ESSHHHH
T ss_pred c-CCCEe--ecc-------ccccHH--HHHHHHHcCCCeeehHHhhc--CHHHHHHHHHHHHHHhHHHHHh--cchHHHH
Confidence 3 56653 221 111112 24567788999887544432 3 36889999999999885 7888999
Q ss_pred HHHHHhcCceEEEeC
Q 017440 316 VYMQRFMGIEGVIVD 330 (371)
Q Consensus 316 ~~l~~~~GVdgIiTD 330 (371)
.+.+ ..|++-|=.|
T Consensus 167 ~rAl-~~~a~iIGIN 180 (258)
T 4a29_A 167 DIAL-RIGARFIGIM 180 (258)
T ss_dssp HHHH-HTTCSEEEEC
T ss_pred HHHh-cCCCcEEEEe
Confidence 8886 6899877555
No 220
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=27.33 E-value=3e+02 Score=25.27 Aligned_cols=127 Identities=14% Similarity=0.176 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHhcCCCCeEEecCCH----HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHH---HhCCCce
Q 017440 206 ALEAILKVVFEHAQGRPIMFSSFQP----DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVC---LAGGLQG 278 (371)
Q Consensus 206 ~~~~vl~~l~~~~~~~~v~i~Sf~~----~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 278 (371)
-+.++-+.|.+.|..+++-|-|+.. ..---+|......|.. ........|+ ....+++..+ ..-|++.
T Consensus 174 rV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~---GDRktYQmdp--aN~~EAlre~~~Di~EGAD~ 248 (330)
T 1pv8_A 174 RVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAF---GDRRCYQLPP--GARGLALRAVDRDVREGADM 248 (330)
T ss_dssp HHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC----------------CCT--TCHHHHHHHHHHHHHTTCSB
T ss_pred HHHHHHHHHHhCCCcCCceEeehhHHHhHhhhhHHHHHHhcCCCC---CCccccCCCC--CCHHHHHHHHHhhHHhCCce
Confidence 3556666677788887788877662 2222333332222211 1111111121 2233333332 2457776
Q ss_pred EecccccccCChHHHHHHHHh--CCeEEEecccCChHHHH-----------------H--HHHhcCceEEEeCChHHHHH
Q 017440 279 IVSEVRAIFKNPGAIKKIKEA--KLCLVSYGELNNVPEVV-----------------Y--MQRFMGIEGVIVDLVSEITE 337 (371)
Q Consensus 279 v~~~~~~~~~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~-----------------~--l~~~~GVdgIiTD~p~~l~~ 337 (371)
+.+-... .--+.++++++. ++++.+| -|..+-.|. . .+++.|+|+|+|=+...+.+
T Consensus 249 vMVKPal--~YLDIi~~vk~~~p~~P~aaY-qVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~a~ 325 (330)
T 1pv8_A 249 LMVKPGM--PYLDIVREVKDKHPDLPLAVY-HVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLLQ 325 (330)
T ss_dssp EEEESCG--GGHHHHHHHHHHSTTSCEEEE-ECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHHH
T ss_pred EEEecCc--cHHHHHHHHHHhcCCCCeEEE-EcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeeecHHHHHH
Confidence 6543221 123788888875 5899998 554222221 1 13568999999999999888
Q ss_pred HHH
Q 017440 338 AVS 340 (371)
Q Consensus 338 ~l~ 340 (371)
+|+
T Consensus 326 ~L~ 328 (330)
T 1pv8_A 326 WLK 328 (330)
T ss_dssp HTT
T ss_pred Hhc
Confidence 774
No 221
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=26.65 E-value=1.9e+02 Score=24.81 Aligned_cols=66 Identities=11% Similarity=0.119 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
..+..+.+...|+..+...... .-.+.+.++.+++. +++|.+-|-+++.+++.+++ +.|+||++.=
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~-~~Gadgv~vG 224 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAA 224 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HTTCSEEEES
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCChHHHHH
Confidence 3444566667787766543110 11245677777654 68888877799989998886 6999999864
No 222
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=26.35 E-value=3.7e+02 Score=24.52 Aligned_cols=54 Identities=11% Similarity=-0.089 Sum_probs=31.1
Q ss_pred HHHHHHHHHh-CCCceEecccccccCChHHHHHHHHhCC---e--EEEecccCChHHHHHHHHhcC
Q 017440 264 LDEAIKVCLA-GGLQGIVSEVRAIFKNPGAIKKIKEAKL---C--LVSYGELNNVPEVVYMQRFMG 323 (371)
Q Consensus 264 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~~~~Gl---~--v~~wgtvn~~~~~~~l~~~~G 323 (371)
+...+++|+. .+...+ ++... ...++++.+++.+. . +++| -.+.+++.+++ ++|
T Consensus 156 F~~ql~lA~e~~~lPvi-iH~r~--A~~d~l~iL~~~~~~~~~gViH~F--sGs~e~a~~~l-~lG 215 (325)
T 3ipw_A 156 YRTLSILHQKYPYLPFF-FHCRK--SWSDLCQLNKELGYNGCKGVVHCF--DGTEEEMNQIL-NEG 215 (325)
T ss_dssp HHHTHHHHHHCTTCCEE-EEEES--CHHHHHHHHHHTTCTTSCEEECSC--CCCHHHHHHHH-HTT
T ss_pred HHHHHHHHHHhhCCeEE-EEeCc--hHHHHHHHHHhcCCCCCcEEEEEC--CCCHHHHHHHH-hcC
Confidence 4556777888 776532 23332 24677888887652 2 3333 34566777775 565
No 223
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=26.26 E-value=1.9e+02 Score=21.62 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=28.5
Q ss_pred HHHHHHHHh-CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhh
Q 017440 291 GAIKKIKEA-KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFI 343 (371)
Q Consensus 291 ~~v~~~~~~-Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~ 343 (371)
++++.+++. ..++.+. |-. +.+...+++ ..|+++++.- .+..+.+.++...
T Consensus 68 ~~~~~l~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~~~l 122 (140)
T 3h5i_A 68 QTALAIQQISELPVVFL-TAHTEPAVVEKIR-SVTAYGYVMKSATEQVLITIVEMAL 122 (140)
T ss_dssp HHHHHHHHHCCCCEEEE-ESSSSCCCCGGGG-GSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEE-ECCCCHHHHHHHH-hCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 455555543 5667666 433 333333443 6899998875 3455555555443
No 224
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=25.89 E-value=4e+02 Score=24.66 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=31.0
Q ss_pred ChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 289 NPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 289 ~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+-+.++.+++. +++|.+= .+.+.+++..+. +.|+|+|+...
T Consensus 217 ~~~~i~~lr~~~~~PvivK-~v~~~e~a~~a~-~~Gad~I~vs~ 258 (368)
T 2nli_A 217 SPRDIEEIAGHSGLPVFVK-GIQHPEDADMAI-KRGASGIWVSN 258 (368)
T ss_dssp CHHHHHHHHHHSSSCEEEE-EECSHHHHHHHH-HTTCSEEEECC
T ss_pred hHHHHHHHHHHcCCCEEEE-cCCCHHHHHHHH-HcCCCEEEEcC
Confidence 45678888885 6788776 367778887775 79999998754
No 225
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=25.84 E-value=21 Score=31.61 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=28.7
Q ss_pred HHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 291 GAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 291 ~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
+.++.+++. +++|.+=|-+++.+.+.++. ..|+|+|+.=
T Consensus 191 ~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~-~~GAdgvvVG 230 (262)
T 1rd5_A 191 SLIQEVKKVTNKPVAVGFGISKPEHVKQIA-QWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEEC
T ss_pred HHHHHHHhhcCCeEEEECCcCCHHHHHHHH-HcCCCEEEEC
Confidence 466777665 57777655688888888875 6899998854
No 226
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.65 E-value=1.1e+02 Score=22.10 Aligned_cols=54 Identities=26% Similarity=0.353 Sum_probs=33.3
Q ss_pred hHHHHHHHHhCCeEEEecccC-----ChHHHHHHHHhcCc--eEEEeCChHHHHHHHHhhhcc
Q 017440 290 PGAIKKIKEAKLCLVSYGELN-----NVPEVVYMQRFMGI--EGVIVDLVSEITEAVSDFIKN 345 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn-----~~~~~~~l~~~~GV--dgIiTD~p~~l~~~l~~~~~~ 345 (371)
.+.++.++..|.++.++ +| |..++..-.+.-|| |-+-+-.|+++.+-+++..+-
T Consensus 41 rdiiksmkdngkplvvf--vngasqndvnefqneakkegvsydvlkstdpeeltqrvreflkt 101 (112)
T 2lnd_A 41 RDIIKSMKDNGKPLVVF--VNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKT 101 (112)
T ss_dssp HHHHHHHTTCCSCEEEE--ECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEE--ecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHHh
Confidence 35677778888887766 33 33333322233554 566777888887777776543
No 227
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=25.61 E-value=81 Score=29.33 Aligned_cols=37 Identities=11% Similarity=0.134 Sum_probs=29.3
Q ss_pred HHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 291 GAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 291 ~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
+.+++++++ ++.|.+- ++-+.+++..+. +.|+|+|..
T Consensus 150 ~~i~~lr~~~~~~~vi~g-~v~t~e~A~~a~-~aGaD~I~v 188 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAG-NVVTGEMVEELI-LSGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTSEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHhcCCCeEEEE-eCCCHHHHHHHH-HhCCCEEEE
Confidence 467778777 7888775 788888888875 799999944
No 228
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=25.52 E-value=2.3e+02 Score=21.87 Aligned_cols=50 Identities=16% Similarity=0.319 Sum_probs=30.2
Q ss_pred HHHHHHHH----hCCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhh
Q 017440 291 GAIKKIKE----AKLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~----~Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~ 342 (371)
++++.+++ ..++|..- |.. +.+...+.+ +.|++++++= .+..+.+.+++.
T Consensus 74 el~~~ir~~~~~~~ipvI~l-Ta~~~~~~~~~~~-~~Ga~~yl~KP~~~~~L~~~i~~~ 130 (134)
T 3to5_A 74 DLLKNIRADEELKHLPVLMI-TAEAKREQIIEAA-QAGVNGYIVKPFTAATLKEKLDKI 130 (134)
T ss_dssp HHHHHHHHSTTTTTCCEEEE-ESSCCHHHHHHHH-HTTCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEEE-ECCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHHH
Confidence 45555554 34677777 554 445555664 6999999986 345555555443
No 229
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=25.50 E-value=2e+02 Score=26.88 Aligned_cols=66 Identities=8% Similarity=0.036 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCceEecccccc--------cCCh----HHHHHHHHh-CCeEEEeccc---CChHHHHHHHHhcCceEE
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAI--------FKNP----GAIKKIKEA-KLCLVSYGEL---NNVPEVVYMQRFMGIEGV 327 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~--------~~~~----~~v~~~~~~-Gl~v~~wgtv---n~~~~~~~l~~~~GVdgI 327 (371)
.+++.+.+...+++.+.++.+.. -.+- +.++++++. +++|.+= .+ .+.+++..+. +.|+|+|
T Consensus 157 ~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK-~vg~g~s~e~A~~l~-~aGad~I 234 (365)
T 3sr7_A 157 YQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILK-EVGFGMDVKTIQTAI-DLGVKTV 234 (365)
T ss_dssp HHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEE-ECSSCCCHHHHHHHH-HHTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEE-ECCCCCCHHHHHHHH-HcCCCEE
Confidence 44455555566766655443321 0111 467777776 6788776 35 6777777775 7999999
Q ss_pred EeCC
Q 017440 328 IVDL 331 (371)
Q Consensus 328 iTD~ 331 (371)
+...
T Consensus 235 ~V~g 238 (365)
T 3sr7_A 235 DISG 238 (365)
T ss_dssp ECCC
T ss_pred EEeC
Confidence 8754
No 230
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=25.47 E-value=2.8e+02 Score=23.58 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=45.5
Q ss_pred cHHHHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhc-----C-ceEEEeC
Q 017440 263 SLDEAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFM-----G-IEGVIVD 330 (371)
Q Consensus 263 ~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~-----G-VdgIiTD 330 (371)
+..+..+.+...|+..+...... .-.+-+.++.+++. +++|.+-|-+.+.+++.+++ +. | +||++.=
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~-~~~~~~~G~adgv~vg 223 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQ-KVHTETNGLLKGVIVG 223 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHH-HHHHHTTTSEEEEEEC
T ss_pred CHHHHHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHH-hcccccCCeEeEEEee
Confidence 34454555667787765543210 11245677777665 78998887899999998886 56 9 9999864
No 231
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=25.20 E-value=2e+02 Score=21.01 Aligned_cols=52 Identities=8% Similarity=0.057 Sum_probs=30.6
Q ss_pred HHHHHHHHhC--CeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhc
Q 017440 291 GAIKKIKEAK--LCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~~G--l~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~ 344 (371)
++++.+++.+ .++.+. |-. +.+...+.+ ..|++++++- .++.+.+.++...+
T Consensus 63 ~~~~~l~~~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 63 QVLETLRKRQYSGIIIIV-SAKNDHFYGKHCA-DAGANGFVSKKEGMNNIIAAIEAAKN 119 (134)
T ss_dssp HHHHHHHHTTCCSEEEEE-ECC---CTHHHHH-HTTCSEEEEGGGCTHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCeEEEE-eCCCChHHHHHHH-HhCCCEEEeCCCCHHHHHHHHHHHHC
Confidence 4566666654 566666 443 333444554 6999998875 45666666665543
No 232
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=25.19 E-value=92 Score=29.08 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=29.3
Q ss_pred hHHHHHHHHhCCeEEEecc-------------cCCh-HHHHHHHHhcCceEEEeCCh
Q 017440 290 PGAIKKIKEAKLCLVSYGE-------------LNNV-PEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgt-------------vn~~-~~~~~l~~~~GVdgIiTD~p 332 (371)
+.+++.+|++|++...|.. .+-. .+++.+ .++|||+|=.|+.
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~~~-a~wGvdylK~D~~ 141 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTF-AEWKVDMLKLDGC 141 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBCBCGGGHHHHHHHH-HHTTCCEEEEECT
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCchhHhHHHHHHHHH-HHhCCceEeeccC
Confidence 4689999999999988821 1111 233344 5799999999874
No 233
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=25.09 E-value=1.7e+02 Score=24.29 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=34.8
Q ss_pred HHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeC---ChHHHHHHHHhh
Q 017440 292 AIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVD---LVSEITEAVSDF 342 (371)
Q Consensus 292 ~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD---~p~~l~~~l~~~ 342 (371)
.++.++++|+++.+- |-+........+..+|++.++.. .|..+..+++++
T Consensus 60 ~l~~L~~~G~~~~iv-T~~~~~~~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~ 112 (195)
T 3n07_A 60 GVKALMNAGIEIAII-TGRRSQIVENRMKALGISLIYQGQDDKVQAYYDICQKL 112 (195)
T ss_dssp HHHHHHHTTCEEEEE-CSSCCHHHHHHHHHTTCCEEECSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEE-ECcCHHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHHHh
Confidence 488888889888888 77666666666667888876553 345555555554
No 234
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=25.05 E-value=2.3e+02 Score=21.52 Aligned_cols=121 Identities=7% Similarity=0.010 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhcCCCCeEEecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc
Q 017440 206 ALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA 285 (371)
Q Consensus 206 ~~~~vl~~l~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 285 (371)
+-..+.+.+.+.+ .+|++...+++.+..++.. .+... ..... . .+.++.+...+++.+......
T Consensus 17 iG~~la~~L~~~g--~~V~~id~~~~~~~~~~~~--~~~~~--~gd~~---------~-~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 17 AGVGLVRELTAAG--KKVLAVDKSKEKIELLEDE--GFDAV--IADPT---------D-ESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp HHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHT--TCEEE--ECCTT---------C-HHHHHHSCCTTCSEEEECCSC
T ss_pred HHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHC--CCcEE--ECCCC---------C-HHHHHhCCcccCCEEEEecCC
Confidence 3455666666655 3688888899888877753 33222 21111 1 111222111235555433221
Q ss_pred ccCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHHHHHHHHhhhc
Q 017440 286 IFKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSEITEAVSDFIK 344 (371)
Q Consensus 286 ~~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~~~ 344 (371)
...+......+++.| ...++..+++......+ ...|+|.++.-.-.....+.+....
T Consensus 81 ~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l-~~~G~~~vi~p~~~~~~~l~~~i~~ 137 (141)
T 3llv_A 81 DEFNLKILKALRSVS-DVYAIVRVSSPKKKEEF-EEAGANLVVLVADAVKQAFMDKIKK 137 (141)
T ss_dssp HHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHH-HHTTCSEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CceEEEEEcChhHHHHH-HHcCCCEEECHHHHHHHHHHHHHhC
Confidence 112334667778887 43333246666666555 5799998887555555554444333
No 235
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.04 E-value=2.1e+02 Score=21.09 Aligned_cols=50 Identities=6% Similarity=0.082 Sum_probs=29.3
Q ss_pred HHHHHHHHh-CCeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhh
Q 017440 291 GAIKKIKEA-KLCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDF 342 (371)
Q Consensus 291 ~~v~~~~~~-Gl~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~ 342 (371)
++++.+++. +.++.+. +- .+.......+ ..|++++++- .+..+.+.++..
T Consensus 72 ~~~~~l~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~ 125 (140)
T 3cg0_A 72 ETAARLAAGCNLPIIFI-TSSQDVETFQRAK-RVNPFGYLAKPVAADTLHRSIEMA 125 (140)
T ss_dssp HHHHHHHHHSCCCEEEE-ECCCCHHHHHHHH-TTCCSEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEE-ecCCCHHHHHHHH-hcCCCEEEeCCCCHHHHHHHHHHH
Confidence 345555543 6777777 44 3444455554 6999998875 345555555543
No 236
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=24.99 E-value=2.1e+02 Score=21.19 Aligned_cols=77 Identities=12% Similarity=0.114 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCCceEeccccccc-CChHHHHHHHHh----CCeEEEecccCC-hHHHHHHHHhcCceEEEeC--ChHHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIF-KNPGAIKKIKEA----KLCLVSYGELNN-VPEVVYMQRFMGIEGVIVD--LVSEIT 336 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~~~----Gl~v~~wgtvn~-~~~~~~l~~~~GVdgIiTD--~p~~l~ 336 (371)
.++++.+.....+.+.++....- -.-++++.+++. +.++.+. +-.. .+...+.+ ..|+++++.- .+..+.
T Consensus 36 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~ 113 (140)
T 3n53_A 36 KEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILL-FSSEHKEAIVNGL-HSGADDYLTKPFNRNDLL 113 (140)
T ss_dssp HHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEE-ECC----CTTTTT-TCCCSEEEESSCCHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEE-ecCCCHHHHHHHH-hcCCCeeeeCCCCHHHHH
Confidence 34444444444444444332110 112466667664 4667776 4433 33333443 6899998875 345555
Q ss_pred HHHHhhh
Q 017440 337 EAVSDFI 343 (371)
Q Consensus 337 ~~l~~~~ 343 (371)
+.++...
T Consensus 114 ~~i~~~~ 120 (140)
T 3n53_A 114 SRIEIHL 120 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 237
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=24.82 E-value=3.3e+02 Score=25.16 Aligned_cols=35 Identities=9% Similarity=0.161 Sum_probs=27.7
Q ss_pred HHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 296 IKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 296 ~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+++.+++|.+=|-+.+..++.+++ .+|+|+|+.=.
T Consensus 203 ~~~~~iPVIA~GGI~~~~di~kal-a~GAd~V~vGs 237 (361)
T 3khj_A 203 ASKFGIPIIADGGIRYSGDIGKAL-AVGASSVMIGS 237 (361)
T ss_dssp HHHHTCCEEEESCCCSHHHHHHHH-HHTCSEEEEST
T ss_pred HhhcCCeEEEECCCCCHHHHHHHH-HcCCCEEEECh
Confidence 345689999887788888888886 68999998543
No 238
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=24.26 E-value=2.4e+02 Score=23.77 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=42.0
Q ss_pred HHHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeC
Q 017440 265 DEAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD 330 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD 330 (371)
.+.++.+...|++.+...... .-.+.+.++.+++. ++++.+=|-+++.+++.+++ +.|+|+++.=
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~-~~Ga~~v~vg 227 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIASGGAGRVEHFYEAA-AAGADAVLAA 227 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEES
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHH-HcCCcHHHHH
Confidence 344555666777766543111 01244677777665 57777766788888888886 6999999853
No 239
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=24.25 E-value=2.1e+02 Score=20.77 Aligned_cols=52 Identities=4% Similarity=-0.050 Sum_probs=28.1
Q ss_pred HHHHHHHHh----CCeEEEecccCChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhc
Q 017440 291 GAIKKIKEA----KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~~----Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~ 344 (371)
++++.+++. ...+.+. |-....+....+ ..|++++++- .+..+.+.++...+
T Consensus 64 ~~~~~l~~~~~~~~~~ii~~-s~~~~~~~~~~~-~~g~~~~l~KP~~~~~L~~~i~~~~~ 121 (127)
T 3i42_A 64 ALVKQLRALPMEKTSKFVAV-SGFAKNDLGKEA-CELFDFYLEKPIDIASLEPILQSIEG 121 (127)
T ss_dssp HHHHHHHHSCCSSCCEEEEE-ECC-CTTCCHHH-HHHCSEEEESSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHhhhccCCCCEEEE-ECCcchhHHHHH-HHhhHHheeCCCCHHHHHHHHHHhhc
Confidence 566677765 3566666 443222223443 5788887764 34555555554443
No 240
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=24.20 E-value=97 Score=26.06 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=46.1
Q ss_pred cCCHHHHHHHHHHCCCCCeE--EEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEE
Q 017440 227 SFQPDAALLIRKLQSTYPVF--FLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLV 304 (371)
Q Consensus 227 Sf~~~~l~~l~~~~p~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~ 304 (371)
++..+.++.+++.. +.++. +.+.. ..+.++.+...|++++.++....-...+.++.+++.|..+.
T Consensus 47 ~~g~~~i~~i~~~~-~~~~~v~l~v~d------------~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~ 113 (220)
T 2fli_A 47 SFGADVVASMRKHS-KLVFDCHLMVVD------------PERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAG 113 (220)
T ss_dssp CBCHHHHHHHHTTC-CSEEEEEEESSS------------GGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEE
T ss_pred ccCHHHHHHHHHhC-CCCEEEEEeecC------------HHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEE
Confidence 45577777777654 33332 22221 11123666778999997765432123467788888898865
Q ss_pred EecccCChHHHHHHHHhcCceEE
Q 017440 305 SYGELNNVPEVVYMQRFMGIEGV 327 (371)
Q Consensus 305 ~wgtvn~~~~~~~l~~~~GVdgI 327 (371)
+=....++.+..+.+ ..++|.|
T Consensus 114 ~~~~~~t~~e~~~~~-~~~~d~v 135 (220)
T 2fli_A 114 VVINPGTPATALEPL-LDLVDQV 135 (220)
T ss_dssp EEECTTSCGGGGGGG-TTTCSEE
T ss_pred EEEcCCCCHHHHHHH-HhhCCEE
Confidence 531112333222221 2457766
No 241
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=24.11 E-value=2.2e+02 Score=24.18 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCceEeccccc-----ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhc---CceEEEeC
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRA-----IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFM---GIEGVIVD 330 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~---GVdgIiTD 330 (371)
..+..+.+...|++.+.+.... .-.+.+.++.+.+. +++|.+-|-+++.+++.+++ +. |+|+++.=
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~-~~~~~Gad~v~vG 225 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIA-TLTHRGVEGAIVG 225 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHH-TTGGGTEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHH-hhccCCCCEEEEc
Confidence 3455566667777765543211 11245677777654 67888887899989998886 67 99999864
No 242
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=24.06 E-value=2.2e+02 Score=21.06 Aligned_cols=53 Identities=6% Similarity=0.051 Sum_probs=34.4
Q ss_pred HHHHHHHH------hCCeEEEeccc-CChHHHHHHHHhcC-ceEEEeC--ChHHHHHHHHhhhcc
Q 017440 291 GAIKKIKE------AKLCLVSYGEL-NNVPEVVYMQRFMG-IEGVIVD--LVSEITEAVSDFIKN 345 (371)
Q Consensus 291 ~~v~~~~~------~Gl~v~~wgtv-n~~~~~~~l~~~~G-VdgIiTD--~p~~l~~~l~~~~~~ 345 (371)
++++.+++ ....+.+. +- .+.....+.+ ..| ++++++- .+..+.+.+++....
T Consensus 77 ~~~~~l~~~~~~~~~~~~ii~~-t~~~~~~~~~~~~-~~g~~~~~l~KP~~~~~L~~~i~~~~~~ 139 (146)
T 3ilh_A 77 ELIDLFKQHFQPMKNKSIVCLL-SSSLDPRDQAKAE-ASDWVDYYVSKPLTANALNNLYNKVLNE 139 (146)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEE-CSSCCHHHHHHHH-HCSSCCEEECSSCCHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhhhccCCCeEEEE-eCCCChHHHHHHH-hcCCcceeeeCCCCHHHHHHHHHHHHHh
Confidence 56777776 34677777 44 4445555554 688 9998885 356777777766554
No 243
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=24.04 E-value=2.3e+02 Score=22.32 Aligned_cols=16 Identities=25% Similarity=0.312 Sum_probs=9.4
Q ss_pred HHHHHHHHhCCeEEEe
Q 017440 291 GAIKKIKEAKLCLVSY 306 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~w 306 (371)
++++.++++|+++.+-
T Consensus 34 ~~l~~L~~~g~~~~i~ 49 (179)
T 3l8h_A 34 QAIARLTQADWTVVLA 49 (179)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 4556666666665555
No 244
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=23.94 E-value=3.9e+02 Score=25.56 Aligned_cols=69 Identities=10% Similarity=0.003 Sum_probs=43.7
Q ss_pred HHHHHhCCCceEecccccccCC-hHHHHHHHHhCCeEEEecccCChHHHHHHHHh--------cCceEEEeCChHHHHHH
Q 017440 268 IKVCLAGGLQGIVSEVRAIFKN-PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRF--------MGIEGVIVDLVSEITEA 338 (371)
Q Consensus 268 ~~~~~~~~~~~v~~~~~~~~~~-~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~--------~GVdgIiTD~p~~l~~~ 338 (371)
++.....|+.......+. +.| ......+.+.|+.|++| --.+.+++.+++.. .+.+.|+-|--+...-+
T Consensus 60 ~~tL~~~GA~v~~~~~n~-~stqd~~aaal~~~gi~v~a~-~ge~~~ey~~~~~~~l~~~~~~~~p~~ilDdGgdl~~~~ 137 (436)
T 3h9u_A 60 IETLVELGAEVRWASCNI-FSTQDHAAAAIAKRGIPVFAW-KGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYV 137 (436)
T ss_dssp HHHHHHTTCEEEEECSST-TTCCHHHHHHHHHTTCCEEEC-TTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHH
T ss_pred HHHHHHcCCEEEEecCCC-CCCcHHHHHHHHhcCCeEEEe-CCCCHHHHHHHHHHHHHhcccCCCCceEeccccHHHHHH
Confidence 344567787765444333 334 45666678899999999 67777887766532 35776665555554433
No 245
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=23.89 E-value=1.6e+02 Score=26.60 Aligned_cols=112 Identities=14% Similarity=0.251 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhcCCCCeEEecC--------CHHHH-HHHH---H-HCCCCCeEEEcCCCCcccCCCCcccHHHHHHHH
Q 017440 205 HALEAILKVVFEHAQGRPIMFSSF--------QPDAA-LLIR---K-LQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVC 271 (371)
Q Consensus 205 ~~~~~vl~~l~~~~~~~~v~i~Sf--------~~~~l-~~l~---~-~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 271 (371)
..++.+++.-++. ..+++++.. ..+.+ ..++ + ....+|+++=.+-+. +++ .+..|
T Consensus 32 e~~~avi~AAee~--~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~---------~~e-~i~~a 99 (288)
T 3q94_A 32 EWTQAILAAAEEE--KSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGS---------SFE-KCKEA 99 (288)
T ss_dssp HHHHHHHHHHHHT--TCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEEC---------SHH-HHHHH
T ss_pred HHHHHHHHHHHHh--CCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCC---------CHH-HHHHH
Confidence 4566676666655 356777632 11222 1122 1 256788887554321 233 34556
Q ss_pred HhCCCceEeccccc------ccCChHHHHHHHHhCCeEEE-----ecc----------cCChHHHHHHHHhcCceEEE
Q 017440 272 LAGGLQGIVSEVRA------IFKNPGAIKKIKEAKLCLVS-----YGE----------LNNVPEVVYMQRFMGIEGVI 328 (371)
Q Consensus 272 ~~~~~~~v~~~~~~------~~~~~~~v~~~~~~Gl~v~~-----wgt----------vn~~~~~~~l~~~~GVdgIi 328 (371)
...|++++..+.+. +..|.++++.+|+.|+.|=+ -|. .-++++..++..+.|||.+-
T Consensus 100 i~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LA 177 (288)
T 3q94_A 100 IDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLA 177 (288)
T ss_dssp HHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEE
T ss_pred HHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEE
Confidence 67799888876543 23467899999999987642 111 12577887776668888663
No 246
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=23.82 E-value=1.8e+02 Score=28.28 Aligned_cols=42 Identities=5% Similarity=0.033 Sum_probs=29.8
Q ss_pred hHHHHHHHHhCCeEEEeccc------------CCh-HHHHHHHHhcCceEEEeCCh
Q 017440 290 PGAIKKIKEAKLCLVSYGEL------------NNV-PEVVYMQRFMGIEGVIVDLV 332 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtv------------n~~-~~~~~l~~~~GVdgIiTD~p 332 (371)
+.+++.+|++|+++..|... +.. .+++. +.++|||.|=-|..
T Consensus 97 k~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~-fa~WGVDylK~D~c 151 (479)
T 3lrk_A 97 GHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQF-FANNRVDYLKYDNC 151 (479)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHH-HHHTTCCEEEEECT
T ss_pred HHHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHH-HHHhCCcEEEEccC
Confidence 56899999999999998311 112 23334 45799999988863
No 247
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=23.76 E-value=2.8e+02 Score=22.20 Aligned_cols=38 Identities=11% Similarity=0.108 Sum_probs=20.9
Q ss_pred HHHHHHHHhCCeEEEecccCCh---HHHHHHHHhcCc----eEEEe
Q 017440 291 GAIKKIKEAKLCLVSYGELNNV---PEVVYMQRFMGI----EGVIV 329 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wgtvn~~---~~~~~l~~~~GV----dgIiT 329 (371)
++++.++++|+++++- |=+.. ..+...+..+|+ |.|++
T Consensus 41 ~~L~~L~~~g~~~~i~-Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~ 85 (189)
T 3ib6_A 41 ETLEKVKQLGFKQAIL-SNTATSDTEVIKRVLTNFGIIDYFDFIYA 85 (189)
T ss_dssp HHHHHHHHTTCEEEEE-ECCSSCCHHHHHHHHHHTTCGGGEEEEEE
T ss_pred HHHHHHHHCCCEEEEE-ECCCccchHHHHHHHHhcCchhheEEEEE
Confidence 5667777777777666 43322 344444444553 45554
No 248
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=23.74 E-value=1.1e+02 Score=26.35 Aligned_cols=103 Identities=9% Similarity=0.050 Sum_probs=56.1
Q ss_pred EecCCHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCC-hHHHHHHHHhCCeE
Q 017440 225 FSSFQPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKN-PGAIKKIKEAKLCL 303 (371)
Q Consensus 225 i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~v~~~~~~Gl~v 303 (371)
|.++-++.++.+++.. ++++++-.. ..|.. ++...+.+.+..+ ++.+.++... . ++.++.+ +.|..|
T Consensus 34 ~~~~G~~~v~~L~~~~-g~~VflDlK-----~~DIp-nTv~~a~~~~~~~-ad~vTvh~~~---G~~~~~~~~-~~~~~v 101 (215)
T 3ve9_A 34 LLNLGKEKVKELVGLV-DGIKILDLK-----LADID-NTMILIVDELKDI-TNSFIAHAFV---GVEGSLASL-SQRVDL 101 (215)
T ss_dssp HHHHCHHHHHHHHTTC-CSEEEEEEE-----ECSCH-HHHHHHHHHHTTT-CSEEEEEGGG---CTTTTHHHH-HHHSEE
T ss_pred HHhhCHHHHHHHHHhc-CCcEEEEec-----ccCch-hHHHHHHHHHHHh-hheEEEeCCC---CcHHHHHhH-hcCCCE
Confidence 4456777777877632 555554322 12321 2333344555566 8887765432 3 4455555 445556
Q ss_pred EEecccCCh--------HHHHHHHHhcCceEEEeCC--hHHHHHHHH
Q 017440 304 VSYGELNNV--------PEVVYMQRFMGIEGVIVDL--VSEITEAVS 340 (371)
Q Consensus 304 ~~wgtvn~~--------~~~~~l~~~~GVdgIiTD~--p~~l~~~l~ 340 (371)
.+- |-.+. ....++.+++|+||++.-- |+.+..+.+
T Consensus 102 ~vL-ts~s~~~~~~~~v~~~a~~a~~~G~~GvV~sat~~~e~~~ir~ 147 (215)
T 3ve9_A 102 FLV-LSMSHPGWNDAFYPYLREVARRVNPKGFVAPATRPSMISRVKG 147 (215)
T ss_dssp EEE-CCCSSTTCCGGGHHHHHHHHHHHCCSEEECCTTSHHHHHHHHH
T ss_pred EEE-EecCCcchHHHHHHHHHHHHHHcCCCceeeCCCCHHHHHHHHH
Confidence 655 33222 2233344568999999864 777765543
No 249
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=23.67 E-value=3e+02 Score=22.46 Aligned_cols=52 Identities=8% Similarity=0.192 Sum_probs=33.7
Q ss_pred HHHHHHHH------hCCeEEEecccC--ChHHHHHHHHhcCceEEEeCChHHHHHHHHhhhc
Q 017440 291 GAIKKIKE------AKLCLVSYGELN--NVPEVVYMQRFMGIEGVIVDLVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~------~Gl~v~~wgtvn--~~~~~~~l~~~~GVdgIiTD~p~~l~~~l~~~~~ 344 (371)
++++.+++ ..++|.+. |-. +.+...+.+ ..|++++++--...+.+.++....
T Consensus 136 el~~~lr~~~~~~~~~~piI~l-s~~~~~~~~~~~~~-~~Ga~~~l~KP~~~L~~~i~~~l~ 195 (206)
T 3mm4_A 136 EATREIRKVEKSYGVRTPIIAV-SGHDPGSEEARETI-QAGMDAFLDKSLNQLANVIREIES 195 (206)
T ss_dssp HHHHHHHHHHHTTTCCCCEEEE-ESSCCCHHHHHHHH-HHTCSEEEETTCTTHHHHHHHHC-
T ss_pred HHHHHHHhhhhhcCCCCcEEEE-ECCCCcHHHHHHHH-hCCCCEEEcCcHHHHHHHHHHHHh
Confidence 45666665 35677777 554 445555564 699999998865667777766544
No 250
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=23.67 E-value=2.3e+02 Score=24.50 Aligned_cols=67 Identities=10% Similarity=0.106 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCCCceEecccc-----cccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 264 LDEAIKVCLAGGLQGIVSEVR-----AIFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
..+..+.+...|+..+.+... ..-.+.++++.+.+. +++|.+-|-+.+.+++.+++ ..|+||++.=.
T Consensus 158 ~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~-~~Gadgv~vgs 230 (266)
T 2w6r_A 158 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAAS 230 (266)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HHTCSEEEEST
T ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH-HcCCHHHHccH
Confidence 344456666778776664211 011245677777765 68888877799989998886 68999998764
No 251
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=23.52 E-value=2.5e+02 Score=21.47 Aligned_cols=49 Identities=14% Similarity=0.096 Sum_probs=28.6
Q ss_pred HHHHHHHHhC--CeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHHHHHHHh
Q 017440 291 GAIKKIKEAK--LCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSD 341 (371)
Q Consensus 291 ~~v~~~~~~G--l~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~ 341 (371)
++++.+++.+ ..|.+. +- .+.+...+++ ..|+++++.- .+..+.+.+++
T Consensus 100 ~~~~~lr~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~~ 153 (157)
T 3hzh_A 100 TCLSNIMEFDKNARVIMI-SALGKEQLVKDCL-IKGAKTFIVKPLDRAKVLQRVMS 153 (157)
T ss_dssp HHHHHHHHHCTTCCEEEE-ESCCCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCcEEEE-eccCcHHHHHHHH-HcCCCEEEeCCCCHHHHHHHHHH
Confidence 3455555543 567776 44 3455555554 6899988875 24555555544
No 252
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=23.48 E-value=78 Score=27.32 Aligned_cols=112 Identities=7% Similarity=-0.027 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHhcCC-CCeEEecCCH-------HHHHHHHHHC-CCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCC
Q 017440 205 HALEAILKVVFEHAQG-RPIMFSSFQP-------DAALLIRKLQ-STYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGG 275 (371)
Q Consensus 205 ~~~~~vl~~l~~~~~~-~~v~i~Sf~~-------~~l~~l~~~~-p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
.+.+.+.+.+++++.. .++++.--.. .....++.+. -++.+++--.+. -...+.......
T Consensus 110 ~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDdfG~-----------g~s~l~~L~~l~ 178 (250)
T 4f3h_A 110 QMIDTIREQLAVYGVPGERLWLQTPESKVFTHLRNAQQFLASVSAMGCKVGLEQFGS-----------GLDSFQLLAHFQ 178 (250)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEHHHHHHSHHHHHHHHHHHHTTTCEEEEEEETS-----------STHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCcceEEEEEechhhhcCHHHHHHHHHHHHHCCCEEEEeCCCC-----------CchHHHHHhhCC
Confidence 4567777777777753 4555543221 1222222221 245554422111 012234455666
Q ss_pred CceEecccccc---c-------CChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 276 LQGIVSEVRAI---F-------KNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 276 ~~~v~~~~~~~---~-------~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
++.|-.+.... . +-..++..+|+.|++|.+=| |.+.++...+ +++|||.+.-
T Consensus 179 ~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeG-VEt~~~~~~l-~~~G~~~~QG 240 (250)
T 4f3h_A 179 PAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAEF-VADAQSMSSF-FTAGVDYVQG 240 (250)
T ss_dssp CSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECC-CCCHHHHHHH-HHHTCSEECS
T ss_pred CCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEec-cCCHHHHHHH-HHcCCCEEee
Confidence 67666552211 0 11357788999999999995 9999988777 5899997753
No 253
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=23.26 E-value=4.1e+02 Score=23.93 Aligned_cols=62 Identities=15% Similarity=0.174 Sum_probs=38.2
Q ss_pred HHHHhCCCceEecccc----c--ccCChHHHHHHHHh-CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 269 KVCLAGGLQGIVSEVR----A--IFKNPGAIKKIKEA-KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 269 ~~~~~~~~~~v~~~~~----~--~~~~~~~v~~~~~~-Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.+...|++++.+... . ...+-.+++.+++. +++|++-|-+++.+.+.+++ .+|+|||..-.
T Consensus 124 ~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al-~~GAdgV~vGs 192 (332)
T 2z6i_A 124 KRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGF-MLGAEAVQVGT 192 (332)
T ss_dssp HHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEecH
Confidence 3445567766655311 0 01123556666543 67888777788888887876 58999987643
No 254
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=23.09 E-value=2.1e+02 Score=25.70 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCeEEEeccc----CChHHHHH---HHHhcCceEE-EeC-----ChHHHHHHHHhhh
Q 017440 291 GAIKKIKEAKLCLVSYGEL----NNVPEVVY---MQRFMGIEGV-IVD-----LVSEITEAVSDFI 343 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wgtv----n~~~~~~~---l~~~~GVdgI-iTD-----~p~~l~~~l~~~~ 343 (371)
+.++.+++.|+.|... .. -+++...+ .+.++|++.| +.| .|..+.++++...
T Consensus 125 ~~v~~a~~~g~~v~~~-~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~ 189 (293)
T 3ewb_X 125 HHISYARQKFDVVQFS-PEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLR 189 (293)
T ss_dssp HHHHHHHTTCSCEEEE-EETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEE-eccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHH
Confidence 5677788888877643 22 23333222 2236888876 344 4777776665543
No 255
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=23.07 E-value=2.5e+02 Score=27.02 Aligned_cols=68 Identities=10% Similarity=0.057 Sum_probs=48.3
Q ss_pred HHHHHHHHHhCCCceEeccccccc---C------------------ChHHHHHHHHh---CCeEEEecccCChHHHHHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIF---K------------------NPGAIKKIKEA---KLCLVSYGELNNVPEVVYMQ 319 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~---~------------------~~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~ 319 (371)
+.+..+.+.+.|+++|.+...... . .-+++..++++ .++|..=|-+.+.+++.+++
T Consensus 313 ~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l 392 (443)
T 1tv5_A 313 KKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI 392 (443)
T ss_dssp HHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHH
Confidence 445566777889999876543210 0 12567777776 68888777899999999987
Q ss_pred HhcCceEEEeCCh
Q 017440 320 RFMGIEGVIVDLV 332 (371)
Q Consensus 320 ~~~GVdgIiTD~p 332 (371)
..|+|+|..=++
T Consensus 393 -~aGAd~Vqigra 404 (443)
T 1tv5_A 393 -EAGASVCQLYSC 404 (443)
T ss_dssp -HTTEEEEEESHH
T ss_pred -HcCCCEEEEcHH
Confidence 699999976544
No 256
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=23.04 E-value=3e+02 Score=26.39 Aligned_cols=92 Identities=11% Similarity=0.076 Sum_probs=57.6
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccc------------cccCChH----HH
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVR------------AIFKNPG----AI 293 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------------~~~~~~~----~v 293 (371)
.+.+..+++..|.+|+. .... .+. +....+...|++++.+... +-..+.. ..
T Consensus 262 ~~~i~~l~~~~p~~pvi--~G~v---------~t~-~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~ 329 (491)
T 1zfj_A 262 LRKIAEIRAHFPNRTLI--AGNI---------ATA-EGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAA 329 (491)
T ss_dssp HHHHHHHHHHCSSSCEE--EEEE---------CSH-HHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcEe--CCCc---------cCH-HHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHH
Confidence 34677777777777775 2111 122 3334566789988854310 0001122 33
Q ss_pred HHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCChHH
Q 017440 294 KKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLVSE 334 (371)
Q Consensus 294 ~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p~~ 334 (371)
..+++.++.|.+=|-+.+..++.+++ .+|+|+++.-.+-.
T Consensus 330 ~~~~~~~ipvia~GGi~~~~di~kal-~~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 330 AVAREYGKTIIADGGIKYSGDIVKAL-AAGGNAVMLGSMFA 369 (491)
T ss_dssp HHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTT
T ss_pred HHHhhcCCCEEeeCCCCCHHHHHHHH-HcCCcceeeCHHhh
Confidence 33344689998877789999999987 79999999977654
No 257
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=22.79 E-value=2.3e+02 Score=20.88 Aligned_cols=77 Identities=8% Similarity=0.064 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCCceEecccccccC-ChHHHHHHHH----hCCeEEEecccCChHH-HH-HHHHhcCceEEEeC--ChHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKE----AKLCLVSYGELNNVPE-VV-YMQRFMGIEGVIVD--LVSEI 335 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~----~Gl~v~~wgtvn~~~~-~~-~l~~~~GVdgIiTD--~p~~l 335 (371)
.++++.+.....+.+.++....-. .-++++.+++ ...++.+. +-....+ .. .. ...|+++++.- .+..+
T Consensus 40 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~-s~~~~~~~~~~~~-~~~g~~~~l~kP~~~~~l 117 (140)
T 3grc_A 40 AQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVV-SANAREGELEFNS-QPLAVSTWLEKPIDENLL 117 (140)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEE-CTTHHHHHHHHCC-TTTCCCEEECSSCCHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEE-ecCCChHHHHHHh-hhcCCCEEEeCCCCHHHH
Confidence 344444444444444444322111 1356666665 35778877 5443332 22 33 36899998875 34555
Q ss_pred HHHHHhhh
Q 017440 336 TEAVSDFI 343 (371)
Q Consensus 336 ~~~l~~~~ 343 (371)
.+.++...
T Consensus 118 ~~~i~~~l 125 (140)
T 3grc_A 118 ILSLHRAI 125 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 258
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=22.73 E-value=2.6e+02 Score=26.51 Aligned_cols=110 Identities=7% Similarity=0.057 Sum_probs=62.8
Q ss_pred HHHHHHHHHHC-----CCCCeEEEcCCCCcccC--CCCcccHHHHHHHHHh-CCCceEecccccc------------cCC
Q 017440 230 PDAALLIRKLQ-----STYPVFFLTNGGAQTCT--DVRRSSLDEAIKVCLA-GGLQGIVSEVRAI------------FKN 289 (371)
Q Consensus 230 ~~~l~~l~~~~-----p~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~------------~~~ 289 (371)
.++++.+++.. +++|+++-+........ ........+.++.+.. .|++.+++..... ...
T Consensus 225 ~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~ 304 (419)
T 3l5a_A 225 LEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFG 304 (419)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTT
T ss_pred HHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcccc
Confidence 35566666553 56788775543211000 0111122334444556 7888887654211 012
Q ss_pred hHHHHHHHHh---CCeEEEecccCChHHHHHHHHhcCceEEEeCCh-----HHHHHHHHh
Q 017440 290 PGAIKKIKEA---KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDLV-----SEITEAVSD 341 (371)
Q Consensus 290 ~~~v~~~~~~---Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~p-----~~l~~~l~~ 341 (371)
..+++.++++ .+.|.+=|-+++++++.+++. . +|.|.-=++ +...++...
T Consensus 305 ~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~-~-aDlVaiGR~~IanPdlv~ki~~G 362 (419)
T 3l5a_A 305 RPVNQIVYEHLAGRIPLIASGGINSPESALDALQ-H-ADMVGMSSPFVTEPDFVHKLAEQ 362 (419)
T ss_dssp SBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGG-G-CSEEEESTHHHHCTTHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHH-h-CCcHHHHHHHHHCcHHHHHHHcC
Confidence 2467777764 478887777889999999874 5 999977664 444444443
No 259
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*
Probab=22.70 E-value=83 Score=28.75 Aligned_cols=31 Identities=10% Similarity=0.247 Sum_probs=27.3
Q ss_pred HHHHHHhCCCCEEEEEEeeecCCeEEEecCC
Q 017440 81 SFNAAARHPLDFIEFDVQVTRDGCPVIFHDN 111 (371)
Q Consensus 81 Af~~A~~~Gad~IE~DV~lTkDG~lVv~HD~ 111 (371)
.+..-++.|+.+++++|+..+|+.+.++|..
T Consensus 50 si~~QL~~GVR~lDlRv~~~~~~~l~~~Hg~ 80 (306)
T 3v1h_A 50 DYLTQMKSGVRFFDIRGRASADNMISVHHGM 80 (306)
T ss_dssp CHHHHHHTTCCEEEEEEEEEETTEEEEEETT
T ss_pred CHHHHHHhCcceEEEEeeecCCCcEEEEccC
Confidence 3677788999999999999999999999974
No 260
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=22.48 E-value=7.2e+02 Score=26.40 Aligned_cols=91 Identities=14% Similarity=0.222 Sum_probs=59.0
Q ss_pred HHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecc----------------------cccc--
Q 017440 231 DAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSE----------------------VRAI-- 286 (371)
Q Consensus 231 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----------------------~~~~-- 286 (371)
+.++.+++.. ++|+..-..... ..+.+..+.+...|++++.+. ....
T Consensus 693 ~iv~~v~~~~-~~Pv~vK~~~~~--------~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~g 763 (1025)
T 1gte_A 693 NICRWVRQAV-QIPFFAKLTPNV--------TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYG 763 (1025)
T ss_dssp HHHHHHHHHC-SSCEEEEECSCS--------SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCE
T ss_pred HHHHHHHHhh-CCceEEEeCCCh--------HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCC
Confidence 3566666654 577766443211 235566677778899888761 1000
Q ss_pred -cCC-------hHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 287 -FKN-------PGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 287 -~~~-------~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.. -+++..++++ ++.|..=|-+.+.+++.+++ ..|+|+|+.=+
T Consensus 764 g~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l-~~Ga~~v~vg~ 817 (1025)
T 1gte_A 764 GVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFL-HSGASVLQVCS 817 (1025)
T ss_dssp EEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHH-HTTCSEEEESH
T ss_pred CCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHH-HcCCCEEEEee
Confidence 001 1467777766 68888887899999999987 59999998743
No 261
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=22.44 E-value=1.1e+02 Score=22.69 Aligned_cols=15 Identities=13% Similarity=0.071 Sum_probs=7.3
Q ss_pred HHHHHHHhCCeEEEe
Q 017440 292 AIKKIKEAKLCLVSY 306 (371)
Q Consensus 292 ~v~~~~~~Gl~v~~w 306 (371)
+++.++++|+++.+.
T Consensus 26 ~l~~L~~~G~~~~i~ 40 (137)
T 2pr7_A 26 LLAAAKKNGVGTVIL 40 (137)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHCCCEEEEE
Confidence 444445555554444
No 262
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=22.15 E-value=51 Score=28.93 Aligned_cols=29 Identities=14% Similarity=0.173 Sum_probs=23.4
Q ss_pred ccchHHHHHHHHhCCCCEEEEEEeeecCCeEE
Q 017440 75 KENTILSFNAAARHPLDFIEFDVQVTRDGCPV 106 (371)
Q Consensus 75 PENTl~Af~~A~~~Gad~IE~DV~lTkDG~lV 106 (371)
+-|-..+.+.+.+.|+|++++||. ||++|
T Consensus 25 ~~~l~~~i~~~~~~gad~lhvDvm---DG~fv 53 (237)
T 3cu2_A 25 WLQLNEEVTTLLENQINVLHFDIA---DGQFS 53 (237)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEE---BSSSS
T ss_pred cccHHHHHHHHHHcCCCEEEEEEe---cCccc
Confidence 346667788889999999999995 77765
No 263
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=22.13 E-value=3.9e+02 Score=23.25 Aligned_cols=73 Identities=12% Similarity=0.171 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCC----eEEEecccCChHHHHHHHHhcC----ceEEEeCChHHH
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKL----CLVSYGELNNVPEVVYMQRFMG----IEGVIVDLVSEI 335 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl----~v~~wgtvn~~~~~~~l~~~~G----VdgIiTD~p~~l 335 (371)
+...++.|+..+...++++... ...++++.+++.+. -+++| -.+.+++.+++ ++| +.|.+| +...+
T Consensus 106 F~~ql~lA~e~~lPviSiH~r~--a~~~~~~il~~~~~~~~~v~H~f--sG~~e~a~~~l-~~G~yis~~g~~~-~~~~~ 179 (254)
T 3gg7_A 106 FQHILRRCEDHGGRILSIHSRR--AESEVLNCLEANPRSGTPILHWY--SGSVTELRRAI-SLGCWFSVGPTMV-RTQKG 179 (254)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHHHCGGGEEEEEETC--CSCHHHHHHHH-HTTCEEEECHHHH-TSHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCC--cHHHHHHHHHHcCCCCcEEEEeC--CCCHHHHHHHH-cCCcEEEECcccC-chHHH
Confidence 4556777888887654334332 24567777776532 22333 33556666665 555 555555 55566
Q ss_pred HHHHHhh
Q 017440 336 TEAVSDF 342 (371)
Q Consensus 336 ~~~l~~~ 342 (371)
+++++..
T Consensus 180 ~~~v~~i 186 (254)
T 3gg7_A 180 AALIRSM 186 (254)
T ss_dssp HHHHHHS
T ss_pred HHHHHHc
Confidence 6666654
No 264
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=22.03 E-value=1.5e+02 Score=24.39 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=28.4
Q ss_pred hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 290 PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
.++++.++++|+++.+- |-........++..+|++.++.
T Consensus 98 ~~~l~~l~~~g~~~~iv-S~~~~~~~~~~~~~~g~~~~~~ 136 (232)
T 3fvv_A 98 VDVVRGHLAAGDLCALV-TATNSFVTAPIARAFGVQHLIA 136 (232)
T ss_dssp HHHHHHHHHTTCEEEEE-ESSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHHcCCCEEEE
Confidence 36788899999998887 6665555566666788875553
No 265
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=21.82 E-value=97 Score=26.33 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=27.9
Q ss_pred hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceE
Q 017440 290 PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEG 326 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdg 326 (371)
.+.++.++++|..+..- |-+....+..++..+|+++
T Consensus 28 ~~~l~~l~~~g~~~~i~-TGr~~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 28 IESIRSAEKKGLTVSLL-SGNVIPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHTTCEEEEE-CSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHCCCEEEEE-CCCCcHHHHHHHHHhCCCC
Confidence 45778888899999888 8888877777666677764
No 266
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=21.66 E-value=43 Score=30.09 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=29.8
Q ss_pred hHHHHHHHHhC-CeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 290 PGAIKKIKEAK-LCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 290 ~~~v~~~~~~G-l~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.++++.+++.. ++|.+=+-++++++..+.+ ..|+||++.=.
T Consensus 197 ~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~-~~gADgvIVGS 238 (271)
T 3nav_A 197 HALLERLQQFDAPPALLGFGISEPAQVKQAI-EAGAAGAISGS 238 (271)
T ss_dssp HHHHHHHHHTTCCCEEECSSCCSHHHHHHHH-HTTCSEEEESH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEECH
Confidence 35778888764 6776533588999887554 68999999753
No 267
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=21.35 E-value=75 Score=27.01 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=29.3
Q ss_pred hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEE
Q 017440 290 PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGV 327 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgI 327 (371)
..++..+|+.|++|.+=| |.+.++...+ +++|+|.+
T Consensus 189 ~~i~~~a~~lg~~viaeG-VEt~~~~~~l-~~~G~~~~ 224 (235)
T 3kzp_A 189 KAWANFAQKNKLDFVVEG-IETKETMTLL-ESHGVSIF 224 (235)
T ss_dssp HHHHHHHHHTTCEEEEEE-ECSTHHHHHH-HHTTCCSC
T ss_pred HHHHHHHHHcCCEEEEEE-ecCHHHHHHH-HHcCCCEe
Confidence 356778899999999995 9998888777 58998754
No 268
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=21.30 E-value=1.3e+02 Score=27.68 Aligned_cols=51 Identities=14% Similarity=0.049 Sum_probs=38.9
Q ss_pred hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC---h---HHHHHHHHhh
Q 017440 290 PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL---V---SEITEAVSDF 342 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~---p---~~l~~~l~~~ 342 (371)
..++..+|+.|+.|.+=| |.+.+++..+ +++|||.+.=-+ | +.+.++|++.
T Consensus 272 ~~ii~la~~lg~~vvAEG-VEt~~q~~~L-~~lG~d~~QGy~~~~P~~~~~~~~~l~~~ 328 (340)
T 4hjf_A 272 RSVVKLGQDLDLEVVAEG-VENAEMAHAL-QSLGCDYGQGFGYAPALSPQEAEVYLNEA 328 (340)
T ss_dssp HHHHHHHHHHTCEEEEEC-CCSHHHHHHH-HHTTCCEEESTTTCCSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEe-CCcHHHHHHH-HHcCCCEeecCccccCCCHHHHHHHHHhc
Confidence 357788899999999995 9998888777 589999886654 3 4555566543
No 269
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=21.09 E-value=3e+02 Score=23.82 Aligned_cols=62 Identities=15% Similarity=0.130 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCceEecccccccCChHHHHHHHH-hCCeEEEecccCC--hHH----HHHHHHhcCceEEEe
Q 017440 264 LDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKE-AKLCLVSYGELNN--VPE----VVYMQRFMGIEGVIV 329 (371)
Q Consensus 264 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~-~Gl~v~~wgtvn~--~~~----~~~l~~~~GVdgIiT 329 (371)
+.++.+.+...|++.+.+.+. .+.+.++.+.+ .+++|.+-|-++. .++ +..++ ..|++||..
T Consensus 168 ~~~~a~~a~~~Gad~i~~~~~---~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~-~~Ga~gv~v 236 (273)
T 2qjg_A 168 VAHAARLGAELGADIVKTSYT---GDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAM-EAGAAGVAV 236 (273)
T ss_dssp HHHHHHHHHHTTCSEEEECCC---SSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHH-HHTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH-HcCCcEEEe
Confidence 344557788899998877642 36777877775 4688888876773 455 33443 589999964
No 270
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=21.04 E-value=2.9e+02 Score=24.62 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=31.9
Q ss_pred HHHHHHHHhCCeEEEec--cc-------CChHHHHHH---HHhcCceEE-EeC-----ChHHHHHHHHhhh
Q 017440 291 GAIKKIKEAKLCLVSYG--EL-------NNVPEVVYM---QRFMGIEGV-IVD-----LVSEITEAVSDFI 343 (371)
Q Consensus 291 ~~v~~~~~~Gl~v~~wg--tv-------n~~~~~~~l---~~~~GVdgI-iTD-----~p~~l~~~l~~~~ 343 (371)
+.++.++++|+.|.++- ++ .+++...++ +.++|+|.| +.| .|..+.++++...
T Consensus 125 ~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~ 195 (298)
T 2cw6_A 125 AILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 195 (298)
T ss_dssp HHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHH
Confidence 46889999999886430 11 134433332 346899987 333 4777776666543
No 271
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=21.00 E-value=1.1e+02 Score=30.85 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=30.0
Q ss_pred hHHHHHHHHhCCeEEEecccCC----------------------hHHHHHHHHhcCceEEEeCChHH
Q 017440 290 PGAIKKIKEAKLCLVSYGELNN----------------------VPEVVYMQRFMGIEGVIVDLVSE 334 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~----------------------~~~~~~l~~~~GVdgIiTD~p~~ 334 (371)
+.+++.+|++|+++..|...-. .+...+.+.++|||+|=.|+...
T Consensus 80 ~~l~~~i~~~Glk~gi~~~~~~~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~~~ 146 (614)
T 3a21_A 80 SAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWCGG 146 (614)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSSCHHHHSCSSSCCCTTCSCTTCHHHHHHHHHHHTCSEEEEECHHH
T ss_pred HHHHHHHHHCCCeeEEEecCCCccccccCCCCCCCCCchhhHHHHHHHHHHHHHcCCcEEEecccCC
Confidence 4688889999999888831110 12222334579999999999643
No 272
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=20.93 E-value=3.3e+02 Score=24.58 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=21.7
Q ss_pred HHHHHHHHh----------CCeEEEec----ccCChHHHHHHHHhcCceEEEe
Q 017440 291 GAIKKIKEA----------KLCLVSYG----ELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 291 ~~v~~~~~~----------Gl~v~~wg----tvn~~~~~~~l~~~~GVdgIiT 329 (371)
+.++.+++. +++|.+=- +.++..++.+.+.+.|||+|+.
T Consensus 192 ~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~v 244 (336)
T 1f76_A 192 DLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIA 244 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 466666654 56766521 2112233334445799999973
No 273
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=20.91 E-value=2.6e+02 Score=24.71 Aligned_cols=79 Identities=8% Similarity=0.096 Sum_probs=50.7
Q ss_pred CccCHHHHHHhcCC-CceEEEEeccCCcccchhHHHHHHHHHHHHHHHHhcCCCCeEEecCCHH--HHHHHHHHCCCCCe
Q 017440 169 PLCTLQEAFEKVDQ-SVGFNVELKFDDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPD--AALLIRKLQSTYPV 245 (371)
Q Consensus 169 ~iptL~evL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~~~~vl~~l~~~~~~~~v~i~Sf~~~--~l~~l~~~~p~~~~ 245 (371)
.+..++++++.++. ++...-|-+..+......+.+..+..+.++.+.+.+.. -+++.++... ++..+++..|++|+
T Consensus 19 GLtv~~~i~~~lp~~~~iy~~D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~~-~iVIACNTa~~~al~~lr~~~~~iPv 97 (268)
T 3out_A 19 GLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVK-AIIIACNTISAIAKDIVQEIAKAIPV 97 (268)
T ss_dssp THHHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHHHHHTTSCE
T ss_pred hHHHHHHHHHHCCCCcEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-EEEEeCCChHHHHHHHHHHhcCCCCE
Confidence 45568999999984 66677776554433333445556666667777776543 3455554443 56888888777887
Q ss_pred EEE
Q 017440 246 FFL 248 (371)
Q Consensus 246 ~~l 248 (371)
.-+
T Consensus 98 igi 100 (268)
T 3out_A 98 IDV 100 (268)
T ss_dssp EEH
T ss_pred Eec
Confidence 653
No 274
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=20.85 E-value=1.2e+02 Score=26.88 Aligned_cols=38 Identities=8% Similarity=0.170 Sum_probs=28.1
Q ss_pred hHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 290 PGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 290 ~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
...++.++++|++|..+ .--+.+++... .+.|+|.|--
T Consensus 114 ~~~i~~L~~~GIrVSLF-IDpd~~qi~aA-~~~GAd~IEL 151 (260)
T 3o6c_A 114 KQSIEKLQNANIEVSLF-INPSLEDIEKS-KILKAQFIEL 151 (260)
T ss_dssp HHHHHHHHHTTCEEEEE-ECSCHHHHHHH-HHTTCSEEEE
T ss_pred HHHHHHHHHCCCEEEEE-eCCCHHHHHHH-HHhCCCEEEE
Confidence 56889999999999998 33345555555 5799998765
No 275
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=20.85 E-value=1.6e+02 Score=25.84 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=34.0
Q ss_pred CChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 288 KNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 288 ~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
.+.++++++++. ++++.+=|-+++++++++++ + |+|+|+...
T Consensus 168 ~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~-~-gAd~VIVGS 211 (240)
T 1viz_A 168 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-E-HADVIVVGN 211 (240)
T ss_dssp CCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHH-T-TCSEEEECT
T ss_pred ChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHH-h-CCCEEEECh
Confidence 467899999887 57776655699999999985 5 999998766
No 276
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.75 E-value=2.6e+02 Score=20.71 Aligned_cols=77 Identities=13% Similarity=0.109 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCceEecccccccC-ChHHHHHHHHh--CCeEEEecccC-ChHHHHHHHHhcCceEEEeC--ChHHHHHH
Q 017440 265 DEAIKVCLAGGLQGIVSEVRAIFK-NPGAIKKIKEA--KLCLVSYGELN-NVPEVVYMQRFMGIEGVIVD--LVSEITEA 338 (371)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~~~--Gl~v~~wgtvn-~~~~~~~l~~~~GVdgIiTD--~p~~l~~~ 338 (371)
.++++.+.....+.+.++....-. .-++++.+++. ...+.+. |.. +.+.....+ ..|++++++- .+..+...
T Consensus 38 ~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~l-s~~~~~~~~~~~~-~~ga~~~l~KP~~~~~L~~~ 115 (137)
T 3cfy_A 38 RDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIA-TAHGSVDLAVNLI-QKGAEDFLEKPINADRLKTS 115 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEE-ESSCCHHHHHHHH-HTTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE-EecCcHHHHHHHH-HCCccEEEeCCCCHHHHHHH
Confidence 344444444444544444332111 13567777765 3567666 444 444455554 6899998875 35566666
Q ss_pred HHhhh
Q 017440 339 VSDFI 343 (371)
Q Consensus 339 l~~~~ 343 (371)
++...
T Consensus 116 i~~~~ 120 (137)
T 3cfy_A 116 VALHL 120 (137)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 277
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=20.72 E-value=2.6e+02 Score=20.57 Aligned_cols=52 Identities=12% Similarity=0.191 Sum_probs=32.2
Q ss_pred HHHHHHHH----hCCeEEEeccc-CChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhhc
Q 017440 291 GAIKKIKE----AKLCLVSYGEL-NNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFIK 344 (371)
Q Consensus 291 ~~v~~~~~----~Gl~v~~wgtv-n~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~~ 344 (371)
++++.+++ .+..+.+. +- .+.....+.+ ..|++++++- .+..+.+.++...+
T Consensus 71 ~~~~~l~~~~~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~~~~ 129 (143)
T 3cnb_A 71 SICHRIKSTPATANIIVIAM-TGALTDDNVSRIV-ALGAETCFGKPLNFTLLEKTIKQLVE 129 (143)
T ss_dssp HHHHHHHTSTTTTTSEEEEE-ESSCCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCccccCCcEEEE-eCCCCHHHHHHHH-hcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 56677766 34677777 44 3444445554 6999999875 34566666655443
No 278
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=20.71 E-value=3.9e+02 Score=22.72 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=33.4
Q ss_pred ccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHhCCeEEEe
Q 017440 262 SSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEAKLCLVSY 306 (371)
Q Consensus 262 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~Gl~v~~w 306 (371)
.++.+.++.++..|+++|-+......--.++.+.+.+.|+.+.+.
T Consensus 23 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~ 67 (269)
T 3ngf_A 23 VPFLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVLF 67 (269)
T ss_dssp SCHHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEEE
Confidence 468899999999999998765432212346777889999998753
No 279
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=20.67 E-value=2.1e+02 Score=26.30 Aligned_cols=107 Identities=10% Similarity=0.053 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEeccccc--ccCChHHHHHHHHhCCeEEEe
Q 017440 229 QPDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRA--IFKNPGAIKKIKEAKLCLVSY 306 (371)
Q Consensus 229 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~v~~~~~~Gl~v~~w 306 (371)
+++.++.+++..|+.++..+..... ...+.++.+...|++++.+.... .-.-.+.++.++++|+.+...
T Consensus 69 ~~e~l~~i~~~~~~~~i~~l~~p~~---------~~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 69 DLEYIEAVAGEISHAQIATLLLPGI---------GSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHHHHHHHHTTCSSSEEEEEECBTT---------BCHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhhCCCCEEEEEecCCc---------ccHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 3566667766667777766532110 11344566667788876654211 112357889999999988665
Q ss_pred c---ccCChHHHHHH---HHhcCceEEE-eC-----ChHHHHHHHHhhhc
Q 017440 307 G---ELNNVPEVVYM---QRFMGIEGVI-VD-----LVSEITEAVSDFIK 344 (371)
Q Consensus 307 g---tvn~~~~~~~l---~~~~GVdgIi-TD-----~p~~l~~~l~~~~~ 344 (371)
. +-.+++.+.++ ..+.|++.|. .| .|..+.++++...+
T Consensus 140 ~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~ 189 (345)
T 1nvm_A 140 LMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKA 189 (345)
T ss_dssp EESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHH
Confidence 1 11233433332 2357888763 22 37777777665543
No 280
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=20.65 E-value=1.1e+02 Score=26.48 Aligned_cols=62 Identities=10% Similarity=-0.047 Sum_probs=42.7
Q ss_pred HHHHHhCCCceEecccccc----------cCChHHHHHHHHhCCeEEEecccCChHHHHHHHHhcCceEEEeCC
Q 017440 268 IKVCLAGGLQGIVSEVRAI----------FKNPGAIKKIKEAKLCLVSYGELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 268 ~~~~~~~~~~~v~~~~~~~----------~~~~~~v~~~~~~Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
+.......++.|-.+.... .+-..++..+|+.|++|.+=| |.+.++...+ +++|||.+.-.+
T Consensus 167 l~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG-VEt~~~~~~l-~~lG~~~~QG~~ 238 (259)
T 3s83_A 167 LSYLTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG-VENAEMAHAL-QSLGCDYGQGFG 238 (259)
T ss_dssp HHHHHHSCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC-CCSHHHHHHH-HHHTCCEECBTT
T ss_pred HHHHHhCCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe-CCCHHHHHHH-HhcCCCEeecCc
Confidence 3455566666665553211 012357788899999999995 9998888777 589999876554
No 281
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=20.60 E-value=2.9e+02 Score=26.77 Aligned_cols=60 Identities=12% Similarity=0.171 Sum_probs=42.6
Q ss_pred HHHHHhCCCceEeccccccc--CChHHHHHHHHh--CCeEEEecccCChHHHHHHHHhcCceEEEe
Q 017440 268 IKVCLAGGLQGIVSEVRAIF--KNPGAIKKIKEA--KLCLVSYGELNNVPEVVYMQRFMGIEGVIV 329 (371)
Q Consensus 268 ~~~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~--Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiT 329 (371)
++.+...|++.+.++..... ...+.+++++++ ++.|.+- ++.+.+++..+. +.|+|+|..
T Consensus 234 a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g-~v~t~e~a~~l~-~aGaD~I~v 297 (490)
T 4avf_A 234 VAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGG-NIATAEAAKALA-EAGADAVKV 297 (490)
T ss_dssp HHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEe-eeCcHHHHHHHH-HcCCCEEEE
Confidence 44445668888876543210 113688888887 6788886 788888888885 799999985
No 282
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=20.59 E-value=4.9e+02 Score=23.76 Aligned_cols=83 Identities=16% Similarity=0.174 Sum_probs=53.1
Q ss_pred HHHHHHHHHHCCCCCeEEEcCCCCcccCCCCcccHHHHHHHHHhCCCceEecccccccCChHHHHHHHHh---CCeEEEe
Q 017440 230 PDAALLIRKLQSTYPVFFLTNGGAQTCTDVRRSSLDEAIKVCLAGGLQGIVSEVRAIFKNPGAIKKIKEA---KLCLVSY 306 (371)
Q Consensus 230 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~---Gl~v~~w 306 (371)
.++++.+++..|..++...++ ++.++. .+...|+++|-++. .+++.++.+.+. ..++.+-
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVd------------tldea~-eAl~aGaD~I~LDn----~~~~~l~~av~~l~~~v~ieaS 281 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETE------------TLAELE-EAISAGADIIMLDN----FSLEMMREAVKINAGRAALENS 281 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEES------------SHHHHH-HHHHTTCSEEEEES----CCHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEC------------CHHHHH-HHHHcCCCEEEECC----CCHHHHHHHHHHhCCCCeEEEE
Confidence 356777888888776666553 344433 34457888887653 256555555442 4777887
Q ss_pred cccCChHHHHHHHHhcCceEEEeCC
Q 017440 307 GELNNVPEVVYMQRFMGIEGVIVDL 331 (371)
Q Consensus 307 gtvn~~~~~~~l~~~~GVdgIiTD~ 331 (371)
|-+| .+.+..+. +.|||+|.+-.
T Consensus 282 GGIt-~~~I~~~a-~tGVD~isvGa 304 (320)
T 3paj_A 282 GNIT-LDNLKECA-ETGVDYISVGA 304 (320)
T ss_dssp SSCC-HHHHHHHH-TTTCSEEECTH
T ss_pred CCCC-HHHHHHHH-HcCCCEEEECc
Confidence 6565 45566664 79999987643
No 283
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.25 E-value=2.4e+02 Score=20.08 Aligned_cols=51 Identities=10% Similarity=-0.020 Sum_probs=29.4
Q ss_pred HHHHHHHHh----CCeEEEecccCChHHHHHHHHhcCceEEEeC--ChHHHHHHHHhhh
Q 017440 291 GAIKKIKEA----KLCLVSYGELNNVPEVVYMQRFMGIEGVIVD--LVSEITEAVSDFI 343 (371)
Q Consensus 291 ~~v~~~~~~----Gl~v~~wgtvn~~~~~~~l~~~~GVdgIiTD--~p~~l~~~l~~~~ 343 (371)
++++.+++. ..++.+. .-.+.......+ ..|++++++- .+..+.+.++...
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~~ 123 (127)
T 2gkg_A 67 LICGKLKKDDDLKNVPIVII-GNPDGFAQHRKL-KAHADEYVAKPVDADQLVERAGALI 123 (127)
T ss_dssp HHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHS-TTCCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCccccCCCEEEE-ecCCchhHHHHH-HhCcchheeCCCCHHHHHHHHHHHH
Confidence 456666654 4555554 344445555553 6899988875 3455555555443
Done!