BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017445
(371 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 163/274 (59%), Gaps = 11/274 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 90
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 91 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 148
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 206
Query: 267 SIGLALFECGTGEFPYAASEGPV---NLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKD 323
S+GL+L E G +P + G + L+ I+ +P P FS EF FV+ CL K+
Sbjct: 207 SMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 266
Query: 324 AEARPTADQLLSHPFITKYEHAKVDLAAFVRSVF 357
R QL+ H FI + + +VD A ++ S
Sbjct: 267 PAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTI 300
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 163/280 (58%), Gaps = 17/280 (6%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 72 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 267 SIGLALFECGTGEFPYAA------SEGPV---NLMLQILEDPSPSPSRQNFSPEFCSFVD 317
S+GL+L E G +P S P+ L+ I+ +P P FS EF FV+
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 247
Query: 318 DCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVF 357
CL K+ R QL+ H FI + + +VD A ++ S
Sbjct: 248 KCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTI 287
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 158/271 (58%), Gaps = 9/271 (3%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 74
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 75 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 132
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L + M FVGT +YMSPER++ YS +DIW
Sbjct: 133 DVKPSNILVNSRGEIKLCDFGVSGQLIDE--MANEFVGTRSYMSPERLQGTHYSVQSDIW 190
Query: 267 SIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEA 326
S+GL+L E G +P L+ I+ +P P FS EF FV+ CL K+
Sbjct: 191 SMGLSLVEMAVGRYPRPPM-AIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAE 249
Query: 327 RPTADQLLSHPFITKYEHAKVDLAAFVRSVF 357
R QL+ H FI + + +VD A ++ S
Sbjct: 250 RADLKQLMVHAFIKRSDAEEVDFAGWLCSTI 280
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 163/312 (52%), Gaps = 53/312 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ I+A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 81
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ K IPE IL + +L+GL+YL ++HR
Sbjct: 82 AFY--SDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 139
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YM+PER++ YS +DIW
Sbjct: 140 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMAPERLQGTHYSVQSDIW 197
Query: 267 SIGLALFECGTGEFPYAASEG---------PV---------------------------- 289
S+GL+L E G +P + PV
Sbjct: 198 SMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMD 257
Query: 290 --------NLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
L+ I+ +P P F+P+F FV+ CL K+ R L +H FI +
Sbjct: 258 SRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNHTFIKR 317
Query: 342 YEHAKVDLAAFV 353
E +VD A ++
Sbjct: 318 SEVEEVDFAGWL 329
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 49/312 (15%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK-RNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ K RNQ++ E++ L E CN +V F+G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 133
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 134 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 191
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 192 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 249
Query: 267 SIGLALFECGTGEFP-------------------------------------YAASEGP- 288
S+GL+L E G +P Y P
Sbjct: 250 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 309
Query: 289 ---VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHA 345
L+ I+ +P P FS EF FV+ CL K+ R QL+ H FI + +
Sbjct: 310 MAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 369
Query: 346 KVDLAAFVRSVF 357
+VD A ++ S
Sbjct: 370 EVDFAGWLCSTI 381
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 49/312 (15%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 72 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 267 SIGLALFECGTGEFP-------------------------------------YAASEGP- 288
S+GL+L E G +P Y P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 289 ---VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHA 345
L+ I+ +P P FS EF FV+ CL K+ R QL+ H FI + +
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
Query: 346 KVDLAAFVRSVF 357
+VD A ++ S
Sbjct: 308 EVDFAGWLCSTI 319
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 49/312 (15%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 72 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 267 SIGLALFECGTGEFP-------------------------------------YAASEGP- 288
S+GL+L E G +P Y P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 289 ---VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHA 345
L+ I+ +P P FS EF FV+ CL K+ R QL+ H FI + +
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
Query: 346 KVDLAAFVRSVF 357
+VD A ++ S
Sbjct: 308 EVDFAGWLCSTI 319
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 49/312 (15%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 72 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 267 SIGLALFECGTGEFP-------------------------------------YAASEGP- 288
S+GL+L E G +P Y P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 289 ---VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHA 345
L+ I+ +P P FS EF FV+ CL K+ R QL+ H FI + +
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
Query: 346 KVDLAAFVRSVF 357
+VD A ++ S
Sbjct: 308 EVDFAGWLCSTI 319
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 158/292 (54%), Gaps = 11/292 (3%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTL 132
+ + + ++ +G GA VV++ H+P+ +I+A+K+I +++ +LL ++
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGG---SLADILRMQKSIPEPILSSMFKK 189
V F+GA + G + I +E MD ++ ++IPE IL +
Sbjct: 104 MRTVDCPFTVTFYGALFR--EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 161
Query: 190 LLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYM 249
+++ L +LH ++HRD+KP+N+L+N G+ K+ DFGIS L +S+A G YM
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID-AGCKPYM 220
Query: 250 SPERIRNE----SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+PERI E YS +DIWS+G+ + E FPY + P + Q++E+PSP
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA 280
Query: 306 QNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVF 357
FS EF F CLKK+++ RPT +L+ HPF T +E D+A+FV+ +
Sbjct: 281 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLIL 332
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 49/312 (15%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 72 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 267 SIGLALFECGTGEFP-------------------------------------YAASEGP- 288
S+GL+L E G +P Y P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 289 ---VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHA 345
L+ I+ +P P FS EF FV+ CL K+ R QL+ H FI + +
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
Query: 346 KVDLAAFVRSVF 357
+VD A ++ S
Sbjct: 308 EVDFAGWLCSTI 319
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 161/312 (51%), Gaps = 49/312 (15%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEG-LVEFHG 146
+G+G VV + H P+ ++A K I++ + RNQ++ E++ L E CN +V F+G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE--CNSPYIVGFYG 98
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AFY G+ISI +E+MDGGSL +L+ IPE IL + +++GL+YL ++HR
Sbjct: 99 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 156
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
D+KP+N+LVN +G K+ DFG+S L +S M +FVGT +YMSPER++ YS +DIW
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIW 214
Query: 267 SIGLALFECGTGEFPYAASEGP-------------------------------------- 288
S+GL+L E G +P +
Sbjct: 215 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP 274
Query: 289 ---VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHA 345
L+ I+ +P P FS EF FV+ CL K+ R QL+ H FI + +
Sbjct: 275 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 334
Query: 346 KVDLAAFVRSVF 357
+VD A ++ S
Sbjct: 335 EVDFAGWLCSTI 346
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 152/277 (54%), Gaps = 11/277 (3%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VV++ H+P+ +I+A+K+I +++ +LL ++ V F+GA
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 148 FYMPDSGQISIALEYMDGG---SLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
+ G + I +E MD ++ ++IPE IL + +++ L +LH ++
Sbjct: 75 LFR--EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE----SYS 260
HRD+KP+N+L+N G+ K+ DFGIS L + +A G YM+PERI E YS
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPERINPELNQKGYS 191
Query: 261 YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCL 320
+DIWS+G+ + E FPY + P + Q++E+PSP FS EF F CL
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL 251
Query: 321 KKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVF 357
KK+++ RPT +L+ HPF T +E D+A+FV+ +
Sbjct: 252 KKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLIL 288
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 161/302 (53%), Gaps = 19/302 (6%)
Query: 73 EKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKI--NIFEKEKRNQLLTEIR 130
E+ + + +++ G IG GA V + VH P+ +I+A+K+I + EKE++ QLL ++
Sbjct: 14 EQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK-QLLMDLD 72
Query: 131 TLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-----MQKSIPEPILSS 185
+ + +V+F+GA + G I +E M S + + IPE IL
Sbjct: 73 VVMRSSDCPYIVQFYGALFR--EGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGK 129
Query: 186 MFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT 245
+ ++ L++L ++HRDIKP+N+L++ G K+ DFGIS L +SIA G
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD-AGC 188
Query: 246 VTYMSPERI----RNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSP 301
YM+PERI + Y +D+WS+G+ L+E TG FPY + + Q+++ P
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP 248
Query: 302 SPS---RQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFD 358
S + FSP F +FV+ CL KD RP +LL HPFI YE V++A +V + D
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILD 308
Query: 359 PM 360
M
Sbjct: 309 QM 310
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 161/293 (54%), Gaps = 14/293 (4%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIF-EKEKRNQLLTEIRTL 132
+ Y+ +++ G +GSG V + T +IA+K++ KE+ ++L ++ +
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV 77
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKL 190
++ +V+ G F + + IA+E M G+ A+ L RMQ IPE IL M +
Sbjct: 78 LKSHDCPYIVQCFGTFIT--NTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAI 133
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMS 250
++ L YL ++HRD+KP+N+L++ +G+ K+ DFGIS L + A + G YM+
Sbjct: 134 VKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS-AGCAAYMA 192
Query: 251 PERI-----RNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL-EDPSPSPS 304
PERI Y AD+WS+G++L E TG+FPY + ++ ++L E+P P
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 305 RQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVF 357
FS +F SFV DCL KD RP ++LL H FI +YE +VD+A++ + V
Sbjct: 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVM 305
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 150/292 (51%), Gaps = 11/292 (3%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTL 132
+ + + ++ +G GA VV++ H+P+ +I A+K+I +++ +LL ++
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGG---SLADILRMQKSIPEPILSSMFKK 189
V F+GA + G + I E D ++ ++IPE IL +
Sbjct: 87 XRTVDCPFTVTFYGALFR--EGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVS 144
Query: 190 LLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYM 249
+++ L +LH ++HRD+KP+N+L+N G+ K DFGIS L + +A G Y
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AGCKPYX 203
Query: 250 SPERIRNE----SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+PERI E YS +DIWS+G+ E FPY + P + Q++E+PSP
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA 263
Query: 306 QNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVF 357
FS EF F CLKK+++ RPT +L HPF T +E D+A+FV+ +
Sbjct: 264 DKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGTDVASFVKLIL 315
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 153/259 (59%), Gaps = 13/259 (5%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLV 142
+ +G G+ V +A+H T +I+A+K++ + + +++ EI + C++P +V
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSP---HVV 87
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYLHGVR 201
+++G+++ + + I +EY GS++DI+R++ K++ E ++++ + L+GL YLH +R
Sbjct: 88 KYYGSYF--KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
+HRDIK N+L+N +G K+ DFG++ L + +A +GT +M+PE I+ Y+
Sbjct: 146 K-IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSR-QNFSPEFCSFVDDCL 320
ADIWS+G+ E G+ PYA P+ + I +P P+ + + +S F FV CL
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIH-PMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCL 263
Query: 321 KKDAEARPTADQLLSHPFI 339
K E R TA QLL HPF+
Sbjct: 264 VKSPEQRATATQLLQHPFV 282
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 154/279 (55%), Gaps = 16/279 (5%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN---QLLTEIRTLCEAPCNEGLVEFH 145
IG G+ V + + T ++A+K I++ E E Q + + C++P + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY---ITRYF 83
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G++ S ++ I +EY+ GGS D+L+ + E ++++ +++L+GL YLH R +H
Sbjct: 84 GSYL--KSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERK-IH 139
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK AN+L++ +G K+ DFG++ L ++ FVGT +M+PE I+ +Y + ADI
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G+ E GE P + P+ ++ I ++ P+ Q+ P F FV+ CL KD
Sbjct: 200 WSLGITAIELAKGE-PPNSDLHPMRVLFLIPKNSPPTLEGQHSKP-FKEFVEACLNKDPR 257
Query: 326 ARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMK 364
RPTA +LL H FIT+Y +F+ + D +R K
Sbjct: 258 FRPTAKELLKHKFITRYTKK----TSFLTELIDRYKRWK 292
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 152/277 (54%), Gaps = 12/277 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLT-EIRTLCEAPCNEGLVEFHGA 147
IG G+ V + + T +++A+K I++ E E + + EI L + C+ V +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ--CDSSYVTKYYG 88
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
Y+ S ++ I +EY+ GGS D+LR E +++M K++L+GL YLH + +HRD
Sbjct: 89 SYLKGS-KLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKK-IHRD 145
Query: 208 IKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWS 267
IK AN+L++ +G K+ DFG++ L ++ TFVGT +M+PE I+ +Y ADIWS
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWS 205
Query: 268 IGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR 327
+G+ E GE P + P+ ++ I ++ P+ +F+ F F+D CL KD R
Sbjct: 206 LGITAIELAKGE-PPNSDMHPMRVLFLIPKNNPPTLV-GDFTKSFKEFIDACLNKDPSFR 263
Query: 328 PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMK 364
PTA +LL H FI K +++ + D +R K
Sbjct: 264 PTAKELLKHKFIVKNSKK----TSYLTELIDRFKRWK 296
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 149/265 (56%), Gaps = 16/265 (6%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLV 142
I G +G GA V +A + T + A K I +E+ + EI L C+ P +V
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY---IV 79
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSL-ADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
+ GA+Y G++ I +E+ GG++ A +L + + + EP + + +++L+ L++LH R
Sbjct: 80 KLLGAYY--HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES--- 258
++HRD+K N+L+ L+G ++ DFG+SA ++ +F+GT +M+PE + E+
Sbjct: 138 -IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 259 --YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE-DPSPSPSRQNFSPEFCSF 315
Y Y ADIWS+G+ L E E P+ P+ ++L+I + DP + +S EF F
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFRDF 255
Query: 316 VDDCLKKDAEARPTADQLLSHPFIT 340
+ L K+ E RP+A QLL HPF++
Sbjct: 256 LKIALDKNPETRPSAAQLLEHPFVS 280
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 149/265 (56%), Gaps = 16/265 (6%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLV 142
I G +G GA V +A + T + A K I +E+ + EI L C+ P +V
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY---IV 71
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSL-ADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
+ GA+Y G++ I +E+ GG++ A +L + + + EP + + +++L+ L++LH R
Sbjct: 72 KLLGAYY--HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 129
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES--- 258
++HRD+K N+L+ L+G ++ DFG+SA ++ +F+GT +M+PE + E+
Sbjct: 130 -IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 259 --YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE-DPSPSPSRQNFSPEFCSF 315
Y Y ADIWS+G+ L E E P+ P+ ++L+I + DP + +S EF F
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFRDF 247
Query: 316 VDDCLKKDAEARPTADQLLSHPFIT 340
+ L K+ E RP+A QLL HPF++
Sbjct: 248 LKIALDKNPETRPSAAQLLEHPFVS 272
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGL 141
I G +G GA V +A + T + A K I+ +E+ + EI L C+ P +
Sbjct: 40 EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NI 96
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSL-ADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
V+ AFY ++ + I +E+ GG++ A +L +++ + E + + K+ L L+YLH
Sbjct: 97 VKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-----R 255
+ ++HRD+K N+L L G K+ DFG+SA +I +F+GT +M+PE + +
Sbjct: 155 K-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS---PSRQNFSPEF 312
+ Y Y AD+WS+G+ L E E P+ P+ ++L+I + P+ PSR +S F
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSR--WSSNF 270
Query: 313 CSFVDDCLKKDAEARPTADQLLSHPFIT 340
F+ CL+K+ +AR T QLL HPF+T
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 146/268 (54%), Gaps = 20/268 (7%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGL 141
I G +G GA V +A + T + A K I+ +E+ + EI L C+ P +
Sbjct: 40 EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NI 96
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSL-ADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
V+ AFY ++ + I +E+ GG++ A +L +++ + E + + K+ L L+YLH
Sbjct: 97 VKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-----R 255
+ ++HRD+K N+L L G K+ DFG+SA I +F+GT +M+PE + +
Sbjct: 155 K-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS---PSRQNFSPEF 312
+ Y Y AD+WS+G+ L E E P+ P+ ++L+I + P+ PSR +S F
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSR--WSSNF 270
Query: 313 CSFVDDCLKKDAEARPTADQLLSHPFIT 340
F+ CL+K+ +AR T QLL HPF+T
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 144/255 (56%), Gaps = 7/255 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG GAS V A+ + T + +A++++N+ ++ K+ ++ EI + E N +V +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYL 83
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +EY+ GGSL D++ + + E ++++ ++ LQ L +LH ++H
Sbjct: 84 DSYLVGD--ELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHS-NQVIH 139
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK N+L+ + G K+TDFG A + + +T VGT +M+PE + ++Y DI
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ E GE PY +E P+ + I + +P + + S F F++ CL D
Sbjct: 200 WSLGIMAIEMIEGEPPY-LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDV 258
Query: 325 EARPTADQLLSHPFI 339
E R +A +LL H F+
Sbjct: 259 EKRGSAKELLQHQFL 273
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 145/262 (55%), Gaps = 14/262 (5%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
+G+G V + H+ T ++ A+K +++ E+ ++ EI L + + + ++GAF
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 149 YMPD----SGQISIALEYMDGGSLADILRMQK--SIPEPILSSMFKKLLQGLSYLHGVRH 202
+ Q+ + +E+ GS+ D+++ K ++ E ++ + +++L+GLS+LH +
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK- 149
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR-----NE 257
++HRDIK N+L+ K+ DFG+SA L+ ++ TF+GT +M+PE I +
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 209
Query: 258 SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
+Y + +D+WS+G+ E G P P+ + I +P+P + +S +F SF++
Sbjct: 210 TYDFKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKWSKKFQSFIE 268
Query: 318 DCLKKDAEARPTADQLLSHPFI 339
CL K+ RP +QL+ HPFI
Sbjct: 269 SCLVKNHSQRPATEQLMKHPFI 290
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 145/268 (54%), Gaps = 20/268 (7%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGL 141
I G +G GA V +A + T + A K I+ +E+ + EI L C+ P +
Sbjct: 40 EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NI 96
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSL-ADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
V+ AFY ++ + I +E+ GG++ A +L +++ + E + + K+ L L+YLH
Sbjct: 97 VKLLDAFYYENN--LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-----R 255
+ ++HRD+K N+L L G K+ DFG+SA I F+GT +M+PE + +
Sbjct: 155 K-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS---PSRQNFSPEF 312
+ Y Y AD+WS+G+ L E E P+ P+ ++L+I + P+ PSR +S F
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSR--WSSNF 270
Query: 313 CSFVDDCLKKDAEARPTADQLLSHPFIT 340
F+ CL+K+ +AR T QLL HPF+T
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 32/279 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFE-KEKRNQLLTEIRTL--CEAPCNEGLVEF 144
IGSGA++VVQ A P +A+K+IN+ + + ++LL EI+ + C P +V +
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHP---NIVSY 78
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRM------QKS--IPEPILSSMFKKLLQGLSY 196
+ +F + D ++ + ++ + GGS+ DI++ KS + E ++++ +++L+GL Y
Sbjct: 79 YTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMC-----ATFVGTVTYMSP 251
LH +HRD+K N+L+ G +I DFG+SA L + TFVGT +M+P
Sbjct: 137 LHK-NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 252 ERIRN-ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSR----- 305
E + Y + ADIWS G+ E TG PY LML + DP PS
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-PSLETGVQDK 254
Query: 306 ---QNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
+ + F + CL+KD E RPTA +LL H F K
Sbjct: 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 32/279 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFE-KEKRNQLLTEIRTL--CEAPCNEGLVEF 144
IGSGA++VVQ A P +A+K+IN+ + + ++LL EI+ + C P +V +
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHP---NIVSY 73
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRM------QKS--IPEPILSSMFKKLLQGLSY 196
+ +F + D ++ + ++ + GGS+ DI++ KS + E ++++ +++L+GL Y
Sbjct: 74 YTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMC-----ATFVGTVTYMSP 251
LH +HRD+K N+L+ G +I DFG+SA L + TFVGT +M+P
Sbjct: 132 LHK-NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 252 ERIRN-ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSR----- 305
E + Y + ADIWS G+ E TG PY LML + DP PS
Sbjct: 191 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-PSLETGVQDK 249
Query: 306 ---QNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
+ + F + CL+KD E RPTA +LL H F K
Sbjct: 250 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 144/255 (56%), Gaps = 7/255 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG GAS V A+ + T + +A++++N+ ++ K+ ++ EI + E N +V +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYL 83
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +EY+ GGSL D++ + + E ++++ ++ LQ L +LH ++H
Sbjct: 84 DSYLVGD--ELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHS-NQVIH 139
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK N+L+ + G K+TDFG A + + + VGT +M+PE + ++Y DI
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ E GE PY +E P+ + I + +P + + S F F++ CL+ D
Sbjct: 200 WSLGIMAIEMIEGEPPY-LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDV 258
Query: 325 EARPTADQLLSHPFI 339
E R +A +LL H F+
Sbjct: 259 EKRGSAKELLQHQFL 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 158/279 (56%), Gaps = 16/279 (5%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN---QLLTEIRTLCEAPCNEGLVEFH 145
IG G+ V + + T +++A+K I++ E E Q + + C++P + +++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY---VTKYY 71
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G+ Y+ D+ ++ I +EY+ GGS D+L + E ++++ +++L+GL YLH + +H
Sbjct: 72 GS-YLKDT-KLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKK-IH 127
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK AN+L++ G K+ DFG++ L ++ TFVGT +M+PE I+ +Y ADI
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G+ E GE P++ P+ ++ I ++ +P N+S FV+ CL K+
Sbjct: 188 WSLGITAIELARGEPPHSELH-PMKVLFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 326 ARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMK 364
RPTA +LL H FI + +AK +++ + D +R K
Sbjct: 246 FRPTAKELLKHKFILR--NAKK--TSYLTELIDRYKRWK 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 145/255 (56%), Gaps = 7/255 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG GAS V A+ + T + +A++++N+ ++ K+ ++ EI + E N +V +
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYL 84
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +EY+ GGSL D++ + + E ++++ ++ LQ L +LH ++H
Sbjct: 85 DSYLVGD--ELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHS-NQVIH 140
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
R+IK N+L+ + G K+TDFG A + + +T VGT +M+PE + ++Y DI
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ E GE PY +E P+ + I + +P + + S F F++ CL+ D
Sbjct: 201 WSLGIMAIEMIEGEPPY-LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDV 259
Query: 325 EARPTADQLLSHPFI 339
E R +A +L+ H F+
Sbjct: 260 EKRGSAKELIQHQFL 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 143/255 (56%), Gaps = 7/255 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG GAS V A+ + T + +A++++N+ ++ K+ ++ EI + E N +V +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYL 83
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +EY+ GGSL D++ + + E ++++ ++ LQ L +LH ++H
Sbjct: 84 DSYLVGD--ELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHS-NQVIH 139
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK N+L+ + G K+TDFG A + + + VGT +M+PE + ++Y DI
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ E GE PY +E P+ + I + +P + + S F F++ CL D
Sbjct: 200 WSLGIMAIEMIEGEPPY-LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDV 258
Query: 325 EARPTADQLLSHPFI 339
E R +A +LL H F+
Sbjct: 259 EKRGSAKELLQHQFL 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 147/256 (57%), Gaps = 12/256 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN---QLLTEIRTLCEAPCNEGLVEFH 145
IG G+ V + + T +++A+K I++ E E Q + + C++P + +++
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY---VTKYY 91
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G+ Y+ D+ ++ I +EY+ GGS D+L + E ++++ +++L+GL YLH + +H
Sbjct: 92 GS-YLKDT-KLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKK-IH 147
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK AN+L++ G K+ DFG++ L ++ TFVGT +M+PE I+ +Y ADI
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 207
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G+ E GE P++ P+ ++ I ++ +P N+S FV+ CL K+
Sbjct: 208 WSLGITAIELARGEPPHSELH-PMKVLFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPS 265
Query: 326 ARPTADQLLSHPFITK 341
RPTA +LL H FI +
Sbjct: 266 FRPTAKELLKHKFILR 281
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 144/255 (56%), Gaps = 7/255 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG GAS V A+ + T + +A++++N+ ++ K+ ++ EI + E N +V +
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYL 84
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +EY+ GGSL D++ + + E ++++ ++ LQ L +LH ++H
Sbjct: 85 DSYLVGD--ELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHS-NQVIH 140
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK N+L+ + G K+TDFG A + + + VGT +M+PE + ++Y DI
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ E GE PY +E P+ + I + +P + + S F F++ CL+ D
Sbjct: 201 WSLGIMAIEMIEGEPPY-LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDV 259
Query: 325 EARPTADQLLSHPFI 339
E R +A +L+ H F+
Sbjct: 260 EKRGSAKELIQHQFL 274
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 146/257 (56%), Gaps = 7/257 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+ IG G++ +V A + R +A+K +++ ++++R L E+ + + + +VE +
Sbjct: 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-HFNVVEMY 108
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + + ++ + +E++ GG+L DI+ Q + E ++++ + +LQ L+YLH + ++H
Sbjct: 109 KSYLVGE--ELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHA-QGVIH 164
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ L GR K++DFG A + + VGT +M+PE I Y+ DI
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY S+ PV M ++ + P P + SP F++ L +D
Sbjct: 225 WSLGIMVIEMVDGEPPY-FSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDP 283
Query: 325 EARPTADQLLSHPFITK 341
+ R TA +LL HPF+ +
Sbjct: 284 QERATAQELLDHPFLLQ 300
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 157/279 (56%), Gaps = 16/279 (5%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN---QLLTEIRTLCEAPCNEGLVEFH 145
IG G+ V + + T +++A+K I++ E E Q + + C++P + +++
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY---VTKYY 86
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G+ Y+ D+ ++ I +EY+ GGS D+L + E ++++ +++L+GL YLH + +H
Sbjct: 87 GS-YLKDT-KLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKK-IH 142
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK AN+L++ G K+ DFG++ L ++ FVGT +M+PE I+ +Y ADI
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 202
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G+ E GE P++ P+ ++ I ++ +P N+S FV+ CL K+
Sbjct: 203 WSLGITAIELARGEPPHSELH-PMKVLFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPS 260
Query: 326 ARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMK 364
RPTA +LL H FI + +AK +++ + D +R K
Sbjct: 261 FRPTAKELLKHKFILR--NAKK--TSYLTELIDRYKRWK 295
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 157/279 (56%), Gaps = 16/279 (5%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN---QLLTEIRTLCEAPCNEGLVEFH 145
IG G+ V + + T +++A+K I++ E E Q + + C++P + +++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY---VTKYY 71
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G+ Y+ D+ ++ I +EY+ GGS D+L + E ++++ +++L+GL YLH + +H
Sbjct: 72 GS-YLKDT-KLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKK-IH 127
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK AN+L++ G K+ DFG++ L ++ FVGT +M+PE I+ +Y ADI
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G+ E GE P++ P+ ++ I ++ +P N+S FV+ CL K+
Sbjct: 188 WSLGITAIELARGEPPHSELH-PMKVLFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 326 ARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMK 364
RPTA +LL H FI + +AK +++ + D +R K
Sbjct: 246 FRPTAKELLKHKFILR--NAKK--TSYLTELIDRYKRWK 280
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 143/257 (55%), Gaps = 7/257 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG G++ +V A + +++A+KK+++ ++++R L E+ + + +E +VE +
Sbjct: 29 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMY 87
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +E+++GG+L DI+ + E I +++ +LQ LS LH + ++H
Sbjct: 88 NSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLHA-QGVIH 143
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ GR K++DFG A + + VGT +M+PE I Y DI
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY +E P+ M I ++ P + SP F+D L +D
Sbjct: 204 WSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 262
Query: 325 EARPTADQLLSHPFITK 341
R TA +LL HPF+ K
Sbjct: 263 AQRATAAELLKHPFLAK 279
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 143/257 (55%), Gaps = 7/257 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG G++ +V A + +++A+KK+++ ++++R L E+ + + +E +VE +
Sbjct: 25 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMY 83
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +E+++GG+L DI+ + E I +++ +LQ LS LH + ++H
Sbjct: 84 NSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLHA-QGVIH 139
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ GR K++DFG A + + VGT +M+PE I Y DI
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY +E P+ M I ++ P + SP F+D L +D
Sbjct: 200 WSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 258
Query: 325 EARPTADQLLSHPFITK 341
R TA +LL HPF+ K
Sbjct: 259 AQRATAAELLKHPFLAK 275
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 143/257 (55%), Gaps = 7/257 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG G++ +V A + +++A+KK+++ ++++R L E+ + + +E +VE +
Sbjct: 36 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMY 94
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +E+++GG+L DI+ + E I +++ +LQ LS LH + ++H
Sbjct: 95 NSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLHA-QGVIH 150
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ GR K++DFG A + + VGT +M+PE I Y DI
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY +E P+ M I ++ P + SP F+D L +D
Sbjct: 211 WSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 269
Query: 325 EARPTADQLLSHPFITK 341
R TA +LL HPF+ K
Sbjct: 270 AQRATAAELLKHPFLAK 286
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 143/257 (55%), Gaps = 7/257 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG G++ +V A + +++A+KK+++ ++++R L E+ + + +E +VE +
Sbjct: 34 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMY 92
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +E+++GG+L DI+ + E I +++ +LQ LS LH + ++H
Sbjct: 93 NSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLHA-QGVIH 148
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ GR K++DFG A + + VGT +M+PE I Y DI
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 208
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY +E P+ M I ++ P + SP F+D L +D
Sbjct: 209 WSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 267
Query: 325 EARPTADQLLSHPFITK 341
R TA +LL HPF+ K
Sbjct: 268 AQRATAAELLKHPFLAK 284
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 143/257 (55%), Gaps = 7/257 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG G++ +V A + +++A+KK+++ ++++R L E+ + + +E +VE +
Sbjct: 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMY 137
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +E+++GG+L DI+ + E I +++ +LQ LS LH + ++H
Sbjct: 138 NSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLHA-QGVIH 193
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ GR K++DFG A + + VGT +M+PE I Y DI
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 253
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY +E P+ M I ++ P + SP F+D L +D
Sbjct: 254 WSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 312
Query: 325 EARPTADQLLSHPFITK 341
R TA +LL HPF+ K
Sbjct: 313 AQRATAAELLKHPFLAK 329
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 143/257 (55%), Gaps = 7/257 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG G++ +V A + +++A+KK+++ ++++R L E+ + + +E +VE +
Sbjct: 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMY 214
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +E+++GG+L DI+ + E ++++ +LQ LS LH + ++H
Sbjct: 215 NSYLVGD--ELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHA-QGVIH 270
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ GR K++DFG A + + VGT +M+PE I Y DI
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS-PSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY +E P+ M I ++ P + SP F+D L +D
Sbjct: 331 WSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 389
Query: 325 EARPTADQLLSHPFITK 341
R TA +LL HPF+ K
Sbjct: 390 AQRATAAELLKHPFLAK 406
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 142/268 (52%), Gaps = 23/268 (8%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLV 142
I G +G V +A + T + A K I+ +E+ + EI L C+ P +V
Sbjct: 16 IIGELGDFGK--VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NIV 70
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSL-ADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
+ AFY + I +E+ GG++ A +L +++ + E + + K+ L L+YLH +
Sbjct: 71 KLLDAFYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISA-GLENSIAMCATFVGTVTYMSPERI-----R 255
++HRD+K N+L L G K+ DFG+SA I +F+GT +M+PE + +
Sbjct: 129 -IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS---PSRQNFSPEF 312
+ Y Y AD+WS+G+ L E E P+ P+ ++L+I + P+ PSR +S F
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSR--WSSNF 244
Query: 313 CSFVDDCLKKDAEARPTADQLLSHPFIT 340
F+ CL+K+ +AR T QLL HPF+T
Sbjct: 245 KDFLKKCLEKNVDARWTTSQLLQHPFVT 272
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 139/255 (54%), Gaps = 7/255 (2%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
F IG G++ +V A T + +A+KK+++ ++++R L E+ + ++ +V+ +
Sbjct: 50 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEV-VIMRDYHHDNVVDMY 108
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
++ + D ++ + +E+++GG+L DI+ + E I +++ +L+ LSYLH + ++H
Sbjct: 109 SSYLVGD--ELWVVMEFLEGGALTDIVTHTRMNEEQI-ATVCLSVLRALSYLHN-QGVIH 164
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIK ++L+ GR K++DFG A + + VGT +M+PE I Y DI
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILED-PSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS+G+ + E GE PY +E P+ M +I + P S F+D L ++
Sbjct: 225 WSLGIMVIEMIDGEPPY-FNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREP 283
Query: 325 EARPTADQLLSHPFI 339
R TA +LL HPF+
Sbjct: 284 SQRATAQELLGHPFL 298
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 14/254 (5%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFE---KEKRNQLLTEIRTLCEAPCNEG 140
RI IG G S V RA + +ALKK+ IF+ + R + EI L + +
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPN 93
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILR----MQKSIPEPILSSMFKKLLQGLSY 196
+++++ +F + +++I LE D G L+ +++ ++ IPE + F +L L +
Sbjct: 94 VIKYYASFI--EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
+H R ++HRDIKPAN+ + G K+ D G+ + + VGT YMSPERI
Sbjct: 152 MHS-RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
Query: 257 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE--DPSPSPSRQNFSPEFCS 314
Y++ +DIWS+G L+E + P+ + + + + +E D P PS ++S E
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS-DHYSEELRQ 269
Query: 315 FVDDCLKKDAEARP 328
V+ C+ D E RP
Sbjct: 270 LVNMCINPDPEKRP 283
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 138/280 (49%), Gaps = 16/280 (5%)
Query: 68 ESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLL 126
ESD E Y + R+ +G G +V + IA+K+I E++ R +Q L
Sbjct: 11 ESDLLEYDYEYDENGDRV--VLGKGTYGIVYAGRDLSNQVRIAIKEIP--ERDSRYSQPL 66
Query: 127 TEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIP----EPI 182
E L + ++ +V++ G+F ++G I I +E + GGSL+ +LR K P E
Sbjct: 67 HEEIALHKHLKHKNIVQYLGSF--SENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQT 123
Query: 183 LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN-LKGRPKITDFGISAGLENSIAMCAT 241
+ K++L+GL YLH +VHRDIK N+L+N G KI+DFG S L T
Sbjct: 124 IGFYTKQILEGLKYLHD-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182
Query: 242 FVGTVTYMSPERIRN--ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP 299
F GT+ YM+PE I Y ADIWS+G + E TG+ P+ P M ++
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 300 SPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
++ S E +F+ C + D + R A+ LL F+
Sbjct: 243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEG 140
E ++F +G GA SVV+R + IPT + A K IN + R+ Q L +C +
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+V H + + + G + + + GG L + + ++ E S +++L+ +++ H +
Sbjct: 65 IVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH-L 121
Query: 201 RHLVHRDIKPANLLVNLKGR---PKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
+VHRD+KP NLL+ K + K+ DFG++ ++ F GT Y+SPE +R +
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 258 SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS--PSPSRQNFSPEFCSF 315
Y P D+W+ G+ L+ G +P E L QI PSP +PE
Sbjct: 182 PYGKPVDMWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 240
Query: 316 VDDCLKKDAEARPTADQLLSHPFITK 341
++ L + R TA + L HP+I +
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQ 266
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEG 140
E ++F +G GA SVV+R + IPT + A K IN + R+ Q L +C +
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+V H + + + G + + + GG L + + ++ E S +++L+ +++ H +
Sbjct: 65 IVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH-L 121
Query: 201 RHLVHRDIKPANLLVNLKGR---PKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
+VHRD+KP NLL+ K + K+ DFG++ ++ F GT Y+SPE +R +
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 258 SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS--PSPSRQNFSPEFCSF 315
Y P D+W+ G+ L+ G +P E L QI PSP +PE
Sbjct: 182 PYGKPVDMWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 240
Query: 316 VDDCLKKDAEARPTADQLLSHPFITK 341
++ L + R TA + L HP+I +
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQ 266
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 130/260 (50%), Gaps = 14/260 (5%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHG 146
+G G +V + IA+K+I E++ R +Q L E L + ++ +V++ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIP--ERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIP----EPILSSMFKKLLQGLSYLHGVRH 202
+F ++G I I +E + GGSL+ +LR K P E + K++L+GL YLH
Sbjct: 73 SF--SENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHD-NQ 128
Query: 203 LVHRDIKPANLLVN-LKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN--ESY 259
+VHRDIK N+L+N G KI+DFG S L TF GT+ YM+PE I Y
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDC 319
ADIWS+G + E TG+ P+ P M ++ ++ S E +F+ C
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKC 248
Query: 320 LKKDAEARPTADQLLSHPFI 339
+ D + R A+ LL F+
Sbjct: 249 FEPDPDKRACANDLLVDEFL 268
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA SVV+R VH T A K IN + R+ Q L +C + +V H +
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
+ + + + + GG L + + ++ E S +++L+ ++Y H +VHR+
Sbjct: 73 --IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-NGIVHRN 129
Query: 208 IKPANLLVNLKGR---PKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
+KP NLL+ K + K+ DFG++ + +S A F GT Y+SPE ++ + YS P D
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVD 188
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP--SPSPSRQNFSPEFCSFVDDCLKK 322
IW+ G+ L+ G +P E L QI PSP +PE S +D L
Sbjct: 189 IWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 247
Query: 323 DAEARPTADQLLSHPFITKYE 343
+ + R TADQ L P+I E
Sbjct: 248 NPKKRITADQALKVPWICNRE 268
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA SVV+R VH T A K IN + R+ Q L +C + +V H +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
+ + + + + GG L + + ++ E S +++L+ ++Y H +VHR+
Sbjct: 74 --IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-NGIVHRN 130
Query: 208 IKPANLLVNLKGR---PKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
+KP NLL+ K + K+ DFG++ + +S A F GT Y+SPE ++ + YS P D
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVD 189
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP--SPSPSRQNFSPEFCSFVDDCLKK 322
IW+ G+ L+ G +P E L QI PSP +PE S +D L
Sbjct: 190 IWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 248
Query: 323 DAEARPTADQLLSHPFITKYE 343
+ + R TADQ L P+I E
Sbjct: 249 NPKKRITADQALKVPWICNRE 269
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 25/284 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEK---EKRNQLLTEIRTLCEAPCNEGLVEFH 145
IG G+ V A + ++A+KK++ K EK ++ E+R L + + +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL-QKLRHPNTIQYR 120
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLV 204
G + + + +EY GS +D+L + K + E ++++ LQGL+YLH +++
Sbjct: 121 GCYLREHTAWL--VMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS-HNMI 176
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI---RNESYSY 261
HRD+K N+L++ G K+ DFG SA + +A FVGT +M+PE I Y
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFG-SASI---MAPANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D+WS+G+ E + P + ++ + I ++ SP+ ++S F +FVD CL+
Sbjct: 233 KVDVWSLGITCIELAERK-PPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ 291
Query: 322 KDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMKD 365
K + RPT++ LL H F+ + V + D +QR KD
Sbjct: 292 KIPQDRPTSEVLLKHRFVLRERPPTV--------IMDLIQRTKD 327
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA SVV+R VH T A K IN + R+ Q L +C + +V H +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
+ + + + + GG L + + ++ E S +++L+ ++Y H +VHR+
Sbjct: 74 --IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-NGIVHRN 130
Query: 208 IKPANLLVNLKGR---PKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
+KP NLL+ K + K+ DFG++ + +S A F GT Y+SPE ++ + YS P D
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVD 189
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP--SPSPSRQNFSPEFCSFVDDCLKK 322
IW+ G+ L+ G +P E L QI PSP +PE S +D L
Sbjct: 190 IWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 248
Query: 323 DAEARPTADQLLSHPFITKYE 343
+ + R TADQ L P+I E
Sbjct: 249 NPKKRITADQALKVPWICNRE 269
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 25/284 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEK---EKRNQLLTEIRTLCEAPCNEGLVEFH 145
IG G+ V A + ++A+KK++ K EK ++ E+R L + + +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL-QKLRHPNTIQYR 81
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLV 204
G + + + +EY GS +D+L + K + E ++++ LQGL+YLH +++
Sbjct: 82 GCYLREHTAWL--VMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS-HNMI 137
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI---RNESYSY 261
HRD+K N+L++ G K+ DFG SA + +A FVGT +M+PE I Y
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFG-SASI---MAPANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D+WS+G+ E + P + ++ + I ++ SP+ ++S F +FVD CL+
Sbjct: 194 KVDVWSLGITCIELAERK-PPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ 252
Query: 322 KDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMKD 365
K + RPT++ LL H F+ + V + D +QR KD
Sbjct: 253 KIPQDRPTSEVLLKHRFVLRERPPTV--------IMDLIQRTKD 288
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 10/266 (3%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEG 140
E +++ IG GA SVV+R V + T A K IN + R+ Q L +C +
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+V H + + + G + + + GG L + + ++ E S +++L+ + + H +
Sbjct: 65 IVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 201 RHLVHRDIKPANLLVNLKGR---PKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
+VHRD+KP NLL+ K + K+ DFG++ ++ F GT Y+SPE +R E
Sbjct: 123 G-VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 258 SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS--PSPSRQNFSPEFCSF 315
+Y P DIW+ G+ L+ G +P E L QI PSP +PE +
Sbjct: 182 AYGKPVDIWACGVILYILLVG-YPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 240
Query: 316 VDDCLKKDAEARPTADQLLSHPFITK 341
++ L + R TA + L HP++ +
Sbjct: 241 INQMLTINPAKRITAHEALKHPWVCQ 266
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA SVV+R VH T A K IN + R+ Q L +C + +V H +
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
+ + + + + GG L + + ++ E S +++L+ ++Y H +VHR+
Sbjct: 97 --IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-NGIVHRN 153
Query: 208 IKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
+KP NLL+ K + K+ DFG++ + +S A F GT Y+SPE ++ + YS P D
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVD 212
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP--SPSPSRQNFSPEFCSFVDDCLKK 322
IW+ G+ L+ G +P E L QI PSP +PE S +D L
Sbjct: 213 IWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 271
Query: 323 DAEARPTADQLLSHPFITKYE 343
+ + R TADQ L P+I E
Sbjct: 272 NPKKRITADQALKVPWICNRE 292
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 10/266 (3%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEG 140
+ ++F +G GA SVV+R V + A K IN + R+ Q L +C +
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 91
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+V H + + + G + + + GG L + + ++ E S ++L+ ++++H
Sbjct: 92 IVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ- 148
Query: 201 RHLVHRDIKPANLLVNLKGR---PKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
+VHRD+KP NLL+ K + K+ DFG++ ++ F GT Y+SPE +R +
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 258 SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS--PSPSRQNFSPEFCSF 315
Y P DIW+ G+ L+ G +P E L QI PSP +PE +
Sbjct: 209 PYGKPVDIWACGVILYILLVG-YPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 316 VDDCLKKDAEARPTADQLLSHPFITK 341
++ L + R TADQ L HP++ +
Sbjct: 268 INQMLTINPAKRITADQALKHPWVCQ 293
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCNEGLV 142
++F +G GA SVV+R V + + A K IN + R+ Q L +C + +V
Sbjct: 25 QLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIV 84
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
H + + + G + + + GG L + + ++ E S +++L+ + + H +
Sbjct: 85 RLHDS--ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG- 141
Query: 203 LVHRDIKPANLLV--NLKGRP-KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
+VHRD+KP NLL+ LKG K+ DFG++ +E F GT Y+SPE +R + Y
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS--PSPSRQNFSPEFCSFVD 317
P D+W+ G+ L+ G +P E L QI PSP +PE ++
Sbjct: 202 GKPVDLWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 318 DCLKKDAEARPTADQLLSHPFIT 340
L + R TA + L HP+I+
Sbjct: 261 KMLTINPSKRITAAEALKHPWIS 283
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 10/239 (4%)
Query: 107 RIIALKKINI--FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMD 164
R +K+INI ++R + E+ L + +V++ +F ++G + I ++Y +
Sbjct: 50 RQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIVQYRESF--EENGSLYIVMDYCE 106
Query: 165 GGSLADILRMQKSI--PEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPK 222
GG L + QK + E + F ++ L ++H R ++HRDIK N+ + G +
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTVQ 165
Query: 223 ITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPY 282
+ DFGI+ L +++ + +GT Y+SPE N+ Y+ +DIW++G L+E T + +
Sbjct: 166 LGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF 225
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
A NL+L+I+ P P ++S + S V K++ RP+ + +L FI K
Sbjct: 226 EAGSMK-NLVLKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
I +EY+DG +L DI+ + + + Q L++ H ++HRD+KPAN+L++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANILISA 151
Query: 218 KGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
K+ DFGI+ + NS+ A +GT Y+SPE+ R +S +D++S+G L+E
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 275 CGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSR-QNFSPEFCSFVDDCLKKDAEAR 327
TGE P+ + PV++ Q + EDP P +R + S + + V L K+ E R
Sbjct: 212 VLTGEPPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
I +EY+DG +L DI+ + + + Q L++ H ++HRD+KPAN++++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISA 151
Query: 218 KGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
K+ DFGI+ + NS+ A +GT Y+SPE+ R +S +D++S+G L+E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 275 CGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSR-QNFSPEFCSFVDDCLKKDAEAR 327
TGE P+ + PV++ Q + EDP P +R + S + + V L K+ E R
Sbjct: 212 VLTGEPPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
I +EY+DG +L DI+ + + + Q L++ H ++HRD+KPAN++++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISA 151
Query: 218 KGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
K+ DFGI+ + NS+ A +GT Y+SPE+ R +S +D++S+G L+E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 275 CGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSR-QNFSPEFCSFVDDCLKKDAEAR 327
TGE P+ + PV++ Q + EDP P +R + S + + V L K+ E R
Sbjct: 212 VLTGEPPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
I +EY+DG +L DI+ + + + Q L++ H ++HRD+KPAN++++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISA 151
Query: 218 KGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
K+ DFGI+ + NS+ A +GT Y+SPE+ R +S +D++S+G L+E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 275 CGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSR-QNFSPEFCSFVDDCLKKDAEAR 327
TGE P+ + PV++ Q + EDP P +R + S + + V L K+ E R
Sbjct: 212 VLTGEPPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
I +EY+DG +L DI+ + + + Q L++ H ++HRD+KPAN++++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISA 168
Query: 218 KGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
K+ DFGI+ + NS+ A +GT Y+SPE+ R +S +D++S+G L+E
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 228
Query: 275 CGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSR-QNFSPEFCSFVDDCLKKDAEAR 327
TGE P+ + PV++ Q + EDP P +R + S + + V L K+ E R
Sbjct: 229 VLTGEPPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-QLLTEIRTLCEAPCN 138
+ E ++F +G GA SVV+R V + + A IN + R+ Q L +C +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLH 198
+V H + + + G + + + GG L + + ++ E S +++L+ + + H
Sbjct: 70 PNIVRLHDS--ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 199 GVRHLVHRDIKPANLLV--NLKGRP-KITDFGISAGLENSIAMCATFVGTVTYMSPERIR 255
+ +VHR++KP NLL+ LKG K+ DFG++ +E F GT Y+SPE +R
Sbjct: 128 QMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS--PSPSRQNFSPEFC 313
+ Y P D+W+ G+ L+ G +P E L QI PSP +PE
Sbjct: 187 KDPYGKPVDLWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 314 SFVDDCLKKDAEARPTADQLLSHPFIT 340
++ L + R TA + L HP+I+
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
+ +G GA+ VQ AV+ T +A+K +++ + + + + + +E +V+F
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 145 HGAFYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
+G G I + LEY GG L D + +PEP F +L+ G+ YLHG+ +
Sbjct: 70 YGHRR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GI 125
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYS 260
HRDIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 261 YPADIWSIGLALFECGTGEFPY 282
P D+WS G+ L GE P+
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPW 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 26/276 (9%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ--LLTEIRTLCEAPC 137
+ + + IG GA VQ H + ++ A+K ++ FE KR+ E R +
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+ +V+ AF D + + +EYM GG L +++ +PE +++ L +
Sbjct: 134 SPWVVQLFCAF--QDDKYLYMVMEYMPGGDLVNLMS-NYDVPEKWAKFYTAEVVLALDAI 190
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTYMSPERIRN 256
H + L+HRD+KP N+L++ G K+ DFG + E + C T VGT Y+SPE +++
Sbjct: 191 HSM-GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 257 ES----YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL---------EDPSPSP 303
+ Y D WS+G+ LFE G+ P+ A + V +I+ ED S
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA-DSLVGTYSKIMDHKNSLCFPEDAEISK 308
Query: 304 SRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
+N C+F+ D ++ R +++ HPF
Sbjct: 309 HAKNL---ICAFLTD--REVRLGRNGVEEIKQHPFF 339
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 12 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 72 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 188 DVWSCGIVLTAMLAGELPW 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + + +E +V+F+G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G + V+ A HI T ++A+K I +K L I+T EA N
Sbjct: 17 TIGTGGFAKVKLACHILTGEMVAIK---IMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 148 FYMPDSG-QISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+++ ++ +I + LEY GG L D + Q + E +F++++ ++Y+H + HR
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS-QGYAHR 132
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESY-SYPAD 264
D+KP NLL + + K+ DFG+ A + N T G++ Y +PE I+ +SY AD
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEAD 192
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
+WS+G+ L+ G P+ + + L +I+ P + SP + L+ D
Sbjct: 193 VWSMGILLYVLMCGFLPF-DDDNVMALYKKIMRGKYDVP--KWLSPSSILLLQQMLQVDP 249
Query: 325 EARPTADQLLSHPFITK 341
+ R + LL+HP+I +
Sbjct: 250 KKRISMKNLLNHPWIMQ 266
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA VQ AV+ T +A+K +++ + + + + +E +V+F+G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 148 FYMPDSGQIS-IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
G I + LEY GG L D + +PEP F +L+ G+ YLHG+ + HR
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERI-RNESYSYPA 263
DIKP NLL++ + KI+DFG++ N + GT+ Y++PE + R E ++ P
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L GE P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ--LLTEIRTLCE 134
R + + + IG GA VQ H T ++ A+K ++ FE KR+ E R +
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 135 APCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ +V+ AF D + + +EYM GG L +++ +PE +++ L
Sbjct: 125 FANSPWVVQLFYAF--QDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLAL 181
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTYMSPER 253
+H + +HRD+KP N+L++ G K+ DFG + + + C T VGT Y+SPE
Sbjct: 182 DAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 254 IRNES----YSYPADIWSIGLALFECGTGEFPYAAS 285
++++ Y D WS+G+ L+E G+ P+ A
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ--LLTEIRTLCE 134
R + + + IG GA VQ H T ++ A+K ++ FE KR+ E R +
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 135 APCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ +V+ AF D + + +EYM GG L +++ +PE +++ L
Sbjct: 130 FANSPWVVQLFYAF--QDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLAL 186
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTYMSPER 253
+H + +HRD+KP N+L++ G K+ DFG + + + C T VGT Y+SPE
Sbjct: 187 DAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 254 IRNES----YSYPADIWSIGLALFECGTGEFPYAA 284
++++ Y D WS+G+ L+E G+ P+ A
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ--LLTEIRTLCE 134
R + + + IG GA VQ H T ++ A+K ++ FE KR+ E R +
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 135 APCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ +V+ AF D + + +EYM GG L +++ +PE +++ L
Sbjct: 130 FANSPWVVQLFYAF--QDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLAL 186
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTYMSPER 253
+H + +HRD+KP N+L++ G K+ DFG + + + C T VGT Y+SPE
Sbjct: 187 DAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 254 IRNES----YSYPADIWSIGLALFECGTGEFPYAAS 285
++++ Y D WS+G+ L+E G+ P+ A
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 7/175 (4%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
I +EY+DG +L DI+ + + + Q L++ H ++HRD+KPAN++++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISA 151
Query: 218 KGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
K+ DFGI+ + NS+ A +GT Y+SPE+ R +S +D++S+G L+E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 275 CGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSR-QNFSPEFCSFVDDCLKKDAEAR 327
TGE P+ + P ++ Q + EDP P +R + S + + V L K+ E R
Sbjct: 212 VLTGEPPFTG-DSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 18/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
E+ + +G GA VV +A + +A+K+I + +R + E+R L + +
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIE--SESERKAFIVELRQLSRVN-HPNI 64
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ---GLSYLH 198
V+ +GA P + + +EY +GGSL ++L + +P + LQ G++YLH
Sbjct: 65 VKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 199 GV--RHLVHRDIKPANLLVNLKGRP-KITDFGISAGLENSIAMCATFVGTVTYMSPERIR 255
+ + L+HRD+KP NLL+ G KI DFG + ++ + G+ +M+PE
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT---NNKGSAAWMAPEVFE 177
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSF 315
+YS D++S G+ L+E T P+ GP ++ + + + P +N S
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 237
Query: 316 VDDCLKKDAEARPTADQLL 334
+ C KD RP+ ++++
Sbjct: 238 MTRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 18/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
E+ + +G GA VV +A + +A+K+I + +R + E+R L + +
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIE--SESERKAFIVELRQLSRVN-HPNI 63
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ---GLSYLH 198
V+ +GA P + + +EY +GGSL ++L + +P + LQ G++YLH
Sbjct: 64 VKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 199 GV--RHLVHRDIKPANLLVNLKGRP-KITDFGISAGLENSIAMCATFVGTVTYMSPERIR 255
+ + L+HRD+KP NLL+ G KI DFG + ++ + G+ +M+PE
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT---NNKGSAAWMAPEVFE 176
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSF 315
+YS D++S G+ L+E T P+ GP ++ + + + P +N S
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 236
Query: 316 VDDCLKKDAEARPTADQLL 334
+ C KD RP+ ++++
Sbjct: 237 MTRCWSKDPSQRPSMEEIV 255
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 88 AIGSGASSVVQRAVHIPTH-----RIIALKKINIFEKEKRNQLL---TEIRTL--CEAPC 137
+GSGA V+ A T RII+ +K I + + L TEI L PC
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+++ F D+ I LE M+GG L D + K + E F ++L + YL
Sbjct: 202 ---IIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 255
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPE-- 252
H ++HRD+KP N+L++ + KITDFG S L ++ T GT TY++PE
Sbjct: 256 HE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 313
Query: 253 -RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
+ Y+ D WS+G+ LF C +G P++ V+L QI + + NF PE
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKYNFIPE 367
Query: 312 FCSFVD----DCLKK----DAEARPTADQLLSHPFI 339
+ V D +KK D +AR T ++ L HP++
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFH 145
IG G SSVV+R VH T A+K + + + + L E+R T E +
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 146 GAFYMPDSGQIS----IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
+ DS + S + + M G L D L + ++ E S+ + LL+ +S+LH
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA-N 219
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR------ 255
++VHRD+KP N+L++ + +++DFG S LE + GT Y++PE ++
Sbjct: 220 NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL-RELCGTPGYLAPEILKCSMDET 278
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS---PSPSRQNFSPEF 312
+ Y D+W+ G+ LF G P+ LML+++ + SP + S
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMIMEGQYQFSSPEWDDRSSTV 336
Query: 313 CSFVDDCLKKDAEARPTADQLLSHPFITK 341
+ L+ D EAR TA+Q L HPF +
Sbjct: 337 KDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 88 AIGSGASSVVQRAVHIPTH-----RIIALKKINIFEKEKRNQLL---TEIRTL--CEAPC 137
+GSGA V+ A T RII+ +K I + + L TEI L PC
Sbjct: 156 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+++ F D+ I LE M+GG L D + K + E F ++L + YL
Sbjct: 216 ---IIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 269
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPE-- 252
H ++HRD+KP N+L++ + KITDFG S L ++ T GT TY++PE
Sbjct: 270 HE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 327
Query: 253 -RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
+ Y+ D WS+G+ LF C +G P++ V+L QI + + NF PE
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKYNFIPE 381
Query: 312 FCSFVD----DCLKK----DAEARPTADQLLSHPFI 339
+ V D +KK D +AR T ++ L HP++
Sbjct: 382 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 7/225 (3%)
Query: 116 IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ 175
+ + +R ++ EI ++ + ++ +V FHG F D+ + + LE SL ++ + +
Sbjct: 55 LLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRR 111
Query: 176 KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
K++ EP ++++ G YLH R ++HRD+K NL +N KI DFG++ +E
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 236 IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
T GT Y++PE + + +S+ D+WSIG ++ G+ P+ S L+I
Sbjct: 171 GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRI 229
Query: 296 LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFIT 340
++ P N P S + L+ D ARPT ++LL+ F T
Sbjct: 230 KKNEYSIPKHIN--PVAASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 7/225 (3%)
Query: 116 IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ 175
+ + +R ++ EI ++ + ++ +V FHG F D+ + + LE SL ++ + +
Sbjct: 55 LLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRR 111
Query: 176 KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
K++ EP ++++ G YLH R ++HRD+K NL +N KI DFG++ +E
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 170
Query: 236 IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
T GT Y++PE + + +S+ D+WSIG ++ G+ P+ S L+I
Sbjct: 171 GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRI 229
Query: 296 LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFIT 340
++ P N P S + L+ D ARPT ++LL+ F T
Sbjct: 230 KKNEYSIPKHIN--PVAASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKIN--------IFEKEKRNQLLTEIRTL--CEAPC 137
+GSGA V+ A T + +A+K I+ E + + TEI L PC
Sbjct: 16 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+++ F D+ I LE M+GG L D + K + E F ++L + YL
Sbjct: 76 ---IIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 129
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPE-- 252
H ++HRD+KP N+L++ + KITDFG S L ++ T GT TY++PE
Sbjct: 130 HE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 187
Query: 253 -RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
+ Y+ D WS+G+ LF C +G P++ V+L QI + + NF PE
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKYNFIPE 241
Query: 312 FCSFVD----DCLKK----DAEARPTADQLLSHPFI 339
+ V D +KK D +AR T ++ L HP++
Sbjct: 242 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 117/225 (52%), Gaps = 7/225 (3%)
Query: 116 IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ 175
+ + +R ++ EI ++ + ++ +V FHG F D+ + + LE SL ++ + +
Sbjct: 59 LLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFFE--DNDFVFVVLELCRRRSLLELHKRR 115
Query: 176 KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
K++ EP ++++ G YLH R ++HRD+K NL +N KI DFG++ +E
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 174
Query: 236 IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
T GT Y++PE + + +S+ D+WSIG ++ G+ P+ S L+I
Sbjct: 175 GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRI 233
Query: 296 LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFIT 340
++ P ++ +P S + L+ D ARPT ++LL+ F T
Sbjct: 234 KKNEYSIP--KHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 276
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKIN--------IFEKEKRNQLLTEIRTL--CEAPC 137
+GSGA V+ A T + +A+K I+ E + + TEI L PC
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+++ F D+ I LE M+GG L D + K + E F ++L + YL
Sbjct: 77 ---IIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPE-- 252
H ++HRD+KP N+L++ + KITDFG S L ++ T GT TY++PE
Sbjct: 131 HE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 188
Query: 253 -RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
+ Y+ D WS+G+ LF C +G P++ V+L QI + + NF PE
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKYNFIPE 242
Query: 312 FCSFVD----DCLKK----DAEARPTADQLLSHPFI 339
+ V D +KK D +AR T ++ L HP++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKIN--------IFEKEKRNQLLTEIRTL--CEAPC 137
+GSGA V+ A T + +A+K I+ E + + TEI L PC
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+++ F D+ I LE M+GG L D + K + E F ++L + YL
Sbjct: 77 ---IIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPE-- 252
H ++HRD+KP N+L++ + KITDFG S L ++ T GT TY++PE
Sbjct: 131 HE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 188
Query: 253 -RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
+ Y+ D WS+G+ LF C +G P++ V+L QI + + NF PE
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKYNFIPE 242
Query: 312 FCSFVD----DCLKK----DAEARPTADQLLSHPFI 339
+ V D +KK D +AR T ++ L HP++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKIN--------IFEKEKRNQLLTEIRTL--CEAPC 137
+GSGA V+ A T + +A+K I+ E + + TEI L PC
Sbjct: 23 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+++ F D+ I LE M+GG L D + K + E F ++L + YL
Sbjct: 83 ---IIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 136
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPE-- 252
H ++HRD+KP N+L++ + KITDFG S L ++ T GT TY++PE
Sbjct: 137 HE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 194
Query: 253 -RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
+ Y+ D WS+G+ LF C +G P++ V+L QI + + NF PE
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKYNFIPE 248
Query: 312 FCSFVD----DCLKK----DAEARPTADQLLSHPFI 339
+ V D +KK D +AR T ++ L HP++
Sbjct: 249 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKIN--------IFEKEKRNQLLTEIRTL--CEAPC 137
+GSGA V+ A T + +A+K I+ E + + TEI L PC
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+++ F D+ I LE M+GG L D + K + E F ++L + YL
Sbjct: 77 ---IIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPE-- 252
H ++HRD+KP N+L++ + KITDFG S L ++ T GT TY++PE
Sbjct: 131 HE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYLAPEVL 188
Query: 253 -RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
+ Y+ D WS+G+ LF C +G P++ V+L QI + + NF PE
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------TSGKYNFIPE 242
Query: 312 FCSFVD----DCLKK----DAEARPTADQLLSHPFI 339
+ V D +KK D +AR T ++ L HP++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 23/268 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
IG G+ SV +R +H T+ A+K I +K KR+ EI L + ++ +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVK---IIDKSKRDPT-EEIEILLRYGQHPNIITLKDVY 85
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDI 208
D + + E M GG L D + QK E S++ + + + YLH + +VHRD+
Sbjct: 86 --DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA-QGVVHRDL 142
Query: 209 KPANLL-VNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
KP+N+L V+ G P +I DFG + L + T T +++PE + + Y D
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACD 202
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK-- 322
IWS+G+ L+ TG P+A GP + +IL + + S + + V D K
Sbjct: 203 IWSLGVLLYTMLTGYTPFA--NGPDDTPEEIL--ARIGSGKFSLSGGYWNSVSDTAKDLV 258
Query: 323 ------DAEARPTADQLLSHPFITKYEH 344
D R TA +L HP+I ++
Sbjct: 259 SKMLHVDPHQRLTAALVLRHPWIVHWDQ 286
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-L 141
+++ G G +V++ + + A+K + + R+++ T++ A N +
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFV 92
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ H AF G++ + L+++ GG L L + E + +L GL +LH +
Sbjct: 93 VKLHYAFQT--EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLG 150
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
+++RD+KP N+L++ +G K+TDFG+S + +F GTV YM+PE + + +S+
Sbjct: 151 -IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
AD WS G+ +FE TG P+ + + L IL+ P Q S E S + K
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQGKDRKETMTL-ILKAKLGMP--QFLSTEAQSLLRALFK 266
Query: 322 KDAEAR 327
++ R
Sbjct: 267 RNPANR 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 7/225 (3%)
Query: 116 IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ 175
+ + +R ++ EI ++ + ++ +V FHG F D+ + + LE SL ++ + +
Sbjct: 53 LLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRR 109
Query: 176 KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
K++ EP ++++ G YLH R ++HRD+K NL +N KI DFG++ +E
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168
Query: 236 IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
GT Y++PE + + +S+ D+WSIG ++ G+ P+ S L+I
Sbjct: 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRI 227
Query: 296 LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFIT 340
++ P N P S + L+ D ARPT ++LL+ F T
Sbjct: 228 KKNEYSIPKHIN--PVAASLIQKMLQTDPTARPTINELLNDEFFT 270
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 122/261 (46%), Gaps = 20/261 (7%)
Query: 89 IGSGASSVVQRAVHIPTH--RIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEF 144
+GSGA V TH R I + + ++LL E+ L + P L +F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
D + +E GG L D + + E + + K++L G++YLH ++V
Sbjct: 105 -----FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK-HNIV 158
Query: 205 HRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
HRD+KP NLL+ K + KI DFG+SA EN M +GT Y++PE +R + Y
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-LGTAYYIAPEVLR-KKYDE 216
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS---PSPSRQNFSPEFCSFVDD 318
D+WSIG+ LF G P+ +L+ +E SP +N S +
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQE--ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ 274
Query: 319 CLKKDAEARPTADQLLSHPFI 339
L+ D++ R +A Q L HP+I
Sbjct: 275 MLQFDSQRRISAQQALEHPWI 295
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 15/262 (5%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG G+ S +R VH T+ A+K + +K KR+ EI L + ++
Sbjct: 34 TIGVGSYSECKRCVHKATNMEYAVK---VIDKSKRDPS-EEIEILLRYGQHPNIITLKDV 89
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
+ D + + E M GG L D + QK E S + + + + YLH + +VHRD
Sbjct: 90 Y--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS-QGVVHRD 146
Query: 208 IKPANLL-VNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+KP+N+L V+ G P +I DFG + L + T T +++PE ++ + Y
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGC 206
Query: 264 DIWSIGLALFECGTGEFPYA--ASEGPVNLMLQILEDP-SPSPSRQNFSPEFCS-FVDDC 319
DIWS+G+ L+ G P+A S+ P ++ +I + S N E V
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKM 266
Query: 320 LKKDAEARPTADQLLSHPFITK 341
L D R TA Q+L HP++T+
Sbjct: 267 LHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 116 IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ 175
+ + +R ++ EI ++ + ++ +V FHG F D+ + + LE SL ++ + +
Sbjct: 77 LLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRR 133
Query: 176 KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
K++ EP ++++ G YLH R ++HRD+K NL +N KI DFG++ +E
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 192
Query: 236 IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
GT Y++PE + + +S+ D+WSIG ++ G+ P+ S L+I
Sbjct: 193 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRI 251
Query: 296 LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFIT 340
++ P ++ +P S + L+ D ARPT ++LL+ F T
Sbjct: 252 KKNEYSIP--KHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 294
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 15/262 (5%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG G+ S +R VH T+ A+K + +K KR+ EI L + ++
Sbjct: 34 TIGVGSYSECKRCVHKATNMEYAVK---VIDKSKRDPS-EEIEILLRYGQHPNIITLKDV 89
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
+ D + + E M GG L D + QK E S + + + + YLH + +VHRD
Sbjct: 90 Y--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS-QGVVHRD 146
Query: 208 IKPANLL-VNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+KP+N+L V+ G P +I DFG + L + T T +++PE ++ + Y
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGC 206
Query: 264 DIWSIGLALFECGTGEFPYA--ASEGPVNLMLQILEDP-SPSPSRQNFSPEFCS-FVDDC 319
DIWS+G+ L+ G P+A S+ P ++ +I + S N E V
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKM 266
Query: 320 LKKDAEARPTADQLLSHPFITK 341
L D R TA Q+L HP++T+
Sbjct: 267 LHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 116 IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ 175
+ + +R ++ EI ++ + ++ +V FHG F D+ + + LE SL ++ + +
Sbjct: 79 LLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFFE--DNDFVFVVLELCRRRSLLELHKRR 135
Query: 176 KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
K++ EP ++++ G YLH R ++HRD+K NL +N KI DFG++ +E
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194
Query: 236 IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
GT Y++PE + + +S+ D+WSIG ++ G+ P+ S L+I
Sbjct: 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRI 253
Query: 296 LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFIT 340
++ P ++ +P S + L+ D ARPT ++LL+ F T
Sbjct: 254 KKNEYSIP--KHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 296
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 17/272 (6%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAP 136
+ + + IG+G+ Q+ +I+ K+++ + E EK+ L++E+ L E
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ-MLVSEVNLLRELK 63
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL----RMQKSIPEPILSSMFKKLLQ 192
+ +V ++ + + I +EY +GG LA ++ + ++ + E + + +L
Sbjct: 64 -HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 193 GLSYLH----GVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
L H G ++HRD+KPAN+ ++ K K+ DFG++ L + + TFVGT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP-SPSPSRQN 307
MSPE++ SY+ +DIWS+G L+E P+ A L +I E P R
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYR-- 239
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
+S E + L RP+ +++L +P I
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 23/268 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
IG G+ SV +R +H T+ A+K I +K KR+ EI L + ++ +
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVK---IIDKSKRDPT-EEIEILLRYGQHPNIITLKDVY 85
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDI 208
D + + E GG L D + QK E S++ + + + YLH + +VHRD+
Sbjct: 86 --DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA-QGVVHRDL 142
Query: 209 KPANLL-VNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
KP+N+L V+ G P +I DFG + L + T T +++PE + + Y D
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACD 202
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK-- 322
IWS+G+ L+ TG P+A GP + +IL + + S + + V D K
Sbjct: 203 IWSLGVLLYTXLTGYTPFA--NGPDDTPEEIL--ARIGSGKFSLSGGYWNSVSDTAKDLV 258
Query: 323 ------DAEARPTADQLLSHPFITKYEH 344
D R TA +L HP+I ++
Sbjct: 259 SKXLHVDPHQRLTAALVLRHPWIVHWDQ 286
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G + + T + A K K + + ++ ++ TEI + ++ N +V FH
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPHVVGFH 108
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G F D + + LE SL ++ + +K++ EP ++ +QG+ YLH R ++H
Sbjct: 109 GFFE--DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIH 165
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RD+K NL +N KI DFG++ +E T GT Y++PE + + +S+ DI
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G L+ G+ P+ S ++I ++ P ++ +P + + L D
Sbjct: 226 WSLGCILYTLLVGKPPFETS-CLKETYIRIKKNEYSVP--RHINPVASALIRRMLHADPT 282
Query: 326 ARPTADQLLSHPFIT 340
RP+ +LL+ F T
Sbjct: 283 LRPSVAELLTDEFFT 297
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 131/272 (48%), Gaps = 24/272 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-----FEKEKRNQL----LTEIRTLCEAPCNE 139
+G G SSVV+R +H PT + A+K I++ F E+ +L L E+ L + +
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHG 199
+++ + + + + M G L D L + ++ E + + LL+ + LH
Sbjct: 85 NIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR---- 255
+ ++VHRD+KP N+L++ K+TDFG S L+ + + GT +Y++PE I
Sbjct: 143 L-NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-RSVCGTPSYLAPEIIECSMN 200
Query: 256 --NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS---PSPSRQNFSP 310
+ Y D+WS G+ ++ G P+ + LML+++ + SP ++S
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
V L + R TA++ L+HPF +Y
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 17/272 (6%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAP 136
+ + + IG+G+ Q+ +I+ K+++ + E EK+ L++E+ L E
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ-MLVSEVNLLRELK 63
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL----RMQKSIPEPILSSMFKKLLQ 192
+ +V ++ + + I +EY +GG LA ++ + ++ + E + + +L
Sbjct: 64 -HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 193 GLSYLH----GVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
L H G ++HRD+KPAN+ ++ K K+ DFG++ L + + FVGT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP-SPSPSRQN 307
MSPE++ SY+ +DIWS+G L+E P+ A L +I E P R
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYR-- 239
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
+S E + L RP+ +++L +P I
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 24/272 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-----FEKEKRNQL----LTEIRTLCEAPCNE 139
+G G SSVV+R +H PT + A+K I++ F E+ +L L E+ L + +
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHG 199
+++ + + + + M G L D L + ++ E + + LL+ + LH
Sbjct: 85 NIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR---- 255
+ ++VHRD+KP N+L++ K+TDFG S L+ + GT +Y++PE I
Sbjct: 143 L-NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-REVCGTPSYLAPEIIECSMN 200
Query: 256 --NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS---PSPSRQNFSP 310
+ Y D+WS G+ ++ G P+ + LML+++ + SP ++S
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
V L + R TA++ L+HPF +Y
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 24/272 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-----FEKEKRNQL----LTEIRTLCEAPCNE 139
+G G SSVV+R +H PT + A+K I++ F E+ +L L E+ L + +
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHG 199
+++ + + + + M G L D L + ++ E + + LL+ + LH
Sbjct: 72 NIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR---- 255
+ ++VHRD+KP N+L++ K+TDFG S L+ + GT +Y++PE I
Sbjct: 130 L-NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-REVCGTPSYLAPEIIECSMN 187
Query: 256 --NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS---PSPSRQNFSP 310
+ Y D+WS G+ ++ G P+ + LML+++ + SP ++S
Sbjct: 188 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMIMSGNYQFGSPEWDDYSD 245
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
V L + R TA++ L+HPF +Y
Sbjct: 246 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 277
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 66 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y
Sbjct: 121 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDY 177
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 228
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWIT 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 66 ADESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---R 122
+ + + K + A + I +G G V A + I+ALK + + EK
Sbjct: 10 SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 69
Query: 123 NQLL--TEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPE 180
+QL EI++ P ++ +G F+ D+ ++ + LEY G++ L+ E
Sbjct: 70 HQLRREVEIQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDE 124
Query: 181 PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA 240
++ +L LSY H R ++HRDIKP NLL+ G KI DFG S +S
Sbjct: 125 QRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRT 181
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS 300
T GT+ Y+ PE I + D+WS+G+ +E G+ P+ A+ ++
Sbjct: 182 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETY 232
Query: 301 PSPSRQNFS-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
SR F+ P+F + + LK + RP ++L HP+IT
Sbjct: 233 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 278
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 76 YRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRNQLLTEIRTL 132
+R +E +G G V T R A LKK I K++ LTE R L
Sbjct: 146 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 205
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ 192
+ + L +F D ++ +EY +GG L L ++ E +++
Sbjct: 206 -QNSRHPFLTALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 262
Query: 193 GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGI-SAGLENSIAMCATFVGTVTYMSP 251
L YLH +++V+RD+K NL+++ G KITDFG+ G+++ M TF GT Y++P
Sbjct: 263 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-KTFCGTPEYLAP 321
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
E + + Y D W +G+ ++E G P+ + L ++E+ + PE
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPE 378
Query: 312 FCSFVDDCLKKDAEAR-----PTADQLLSHPFI 339
S + LKKD + R A +++ H F
Sbjct: 379 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 18/267 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEI----RTLCEAPCNEGLVE 143
IG GA SVV+R ++ T + A+K +++ + L TE ++C + +VE
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLA-DILRMQKS---IPEPILSSMFKKLLQGLSYLHG 199
+ G + + E+MDG L +I++ + E + S +++L+ L Y H
Sbjct: 91 LLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 200 VRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
+++HRD+KP N+L+ K K+ DFG++ L S + VGT +M+PE ++
Sbjct: 149 -NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 257 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ--NFSPEFCS 314
E Y P D+W G+ LF +G P+ ++ L I++ RQ + S
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKD 265
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
V L D R T + L+HP++ +
Sbjct: 266 LVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 76 YRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRNQLLTEIRTL 132
+R +E +G G V T R A LKK I K++ LTE R L
Sbjct: 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 202
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ 192
+ + L +F D ++ +EY +GG L L ++ E +++
Sbjct: 203 -QNSRHPFLTALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 259
Query: 193 GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGI-SAGLENSIAMCATFVGTVTYMSP 251
L YLH +++V+RD+K NL+++ G KITDFG+ G+++ M TF GT Y++P
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-KTFCGTPEYLAP 318
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPE 311
E + + Y D W +G+ ++E G P+ + L ++E+ + PE
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPE 375
Query: 312 FCSFVDDCLKKDAEAR-----PTADQLLSHPFI 339
S + LKKD + R A +++ H F
Sbjct: 376 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 10/255 (3%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G + + T + A K K + + ++ ++ TEI + ++ N +V FH
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPHVVGFH 92
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G F D + + LE SL ++ + +K++ EP ++ +QG+ YLH R ++H
Sbjct: 93 GFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIH 149
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RD+K NL +N KI DFG++ +E GT Y++PE + + +S+ DI
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDI 209
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G L+ G+ P+ S ++I ++ P ++ +P + + L D
Sbjct: 210 WSLGCILYTLLVGKPPFETS-CLKETYIRIKKNEYSVP--RHINPVASALIRRMLHADPT 266
Query: 326 ARPTADQLLSHPFIT 340
RP+ +LL+ F T
Sbjct: 267 LRPSVAELLTDEFFT 281
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 94
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 95 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 151
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 260 SYPADIWSIGLALFECGTGEFPY-AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A +EG + + LE P + F P+ V+
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLVEK 267
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 268 LLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 66 ADESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---R 122
+ + + K + A + I +G G V A + I+ALK + + EK
Sbjct: 19 SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 78
Query: 123 NQLL--TEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPE 180
+QL EI++ P ++ +G F+ D+ ++ + LEY G++ L+ E
Sbjct: 79 HQLRREVEIQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDE 133
Query: 181 PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA 240
++ +L LSY H R ++HRDIKP NLL+ G KI DFG S +S
Sbjct: 134 QRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRT 190
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS 300
T GT+ Y+ PE I + D+WS+G+ +E G+ P+ A+ ++
Sbjct: 191 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETY 241
Query: 301 PSPSRQNFS-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
SR F+ P+F + + LK + RP ++L HP+IT
Sbjct: 242 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 287
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 14/259 (5%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAP 136
+ + +I +G G S V A + +A+K I I +EK L +
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETL----KRFEREV 62
Query: 137 CNEGLVEFHGAFYMPDSGQ----ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ 192
N + M D + + +EY++G +L++ + + + ++L
Sbjct: 63 HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILD 122
Query: 193 GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTYMSP 251
G+ + H +R +VHRDIKP N+L++ KI DFGI+ L E S+ +GTV Y SP
Sbjct: 123 GIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPS---RQNF 308
E+ + E+ DI+SIG+ L+E GE P+ E V++ ++ ++D P+ + R++
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG-ETAVSIAIKHIQDSVPNVTTDVRKDI 240
Query: 309 SPEFCSFVDDCLKKDAEAR 327
+ + +KD R
Sbjct: 241 PQSLSNVILRATEKDKANR 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 64 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y
Sbjct: 119 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDY 175
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 226
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G + L+ E ++
Sbjct: 66 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y
Sbjct: 121 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDY 177
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 228
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 18/257 (7%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
++ I IG+G+ V RA + + + F E+ N+ L E+ + + + +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREV-AIMKRLRHPNI 96
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILR---MQKSIPEPILSSMFKKLLQGLSYLH 198
V F GA P + +SI EY+ GSL +L ++ + E SM + +G++YLH
Sbjct: 97 VLFMGAVTQPPN--LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 199 GVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
+VHRD+K NLLV+ K K+ DFG+S + GT +M+PE +R+E
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 258 SYSYPADIWSIGLALFECGTGEFPY-----AASEGPVNLMLQILEDPSPSPSRQNFSPEF 312
+ +D++S G+ L+E T + P+ A V + LE P +N +P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP------RNLNPQV 268
Query: 313 CSFVDDCLKKDAEARPT 329
+ ++ C + RP+
Sbjct: 269 AAIIEGCWTNEPWKRPS 285
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ DS ++ + LEY G++ L+ E ++ +L
Sbjct: 64 HLRHP---NILRLYGYFH--DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H + ++HRDIKP NLL+ G KI DFG S +S A GT+ Y+ P
Sbjct: 119 NALSYCHS-KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLDYLPP 175
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ +D SR F+ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQDTYKRISRVEFTFP 226
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 122/258 (47%), Gaps = 14/258 (5%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLL-TEIRTLCEAPCNEGLVEFHGA 147
+G GA+S+V R T + ALK + +K +++ TEI L + +++
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALK---VLKKTVDKKIVRTEIGVLLRL-SHPNIIKLKEI 116
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
F P +IS+ LE + GG L D + + E + K++L+ ++YLH +VHRD
Sbjct: 117 FETPT--EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE-NGIVHRD 173
Query: 208 IKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
+KP NLL KI DFG+S +E+ + M T GT Y +PE +R +Y D
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM-KTVCGTPGYCAPEILRGCAYGPEVD 232
Query: 265 IWSIGLALFECGTGEFPYAASEGPVNLMLQIL--EDPSPSPSRQNFSPEFCSFVDDCLKK 322
+WS+G+ + G P+ G + +IL E SP S V +
Sbjct: 233 MWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVL 292
Query: 323 DAEARPTADQLLSHPFIT 340
D + R T Q L HP++T
Sbjct: 293 DPKKRLTTFQALQHPWVT 310
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 10/255 (3%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G + + T + A K K + + ++ ++ TEI + ++ N +V FH
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPHVVGFH 108
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G F D + + LE SL ++ + +K++ EP ++ +QG+ YLH R ++H
Sbjct: 109 GFFE--DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIH 165
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RD+K NL +N KI DFG++ +E GT Y++PE + + +S+ DI
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G L+ G+ P+ S ++I ++ P ++ +P + + L D
Sbjct: 226 WSLGCILYTLLVGKPPFETS-CLKETYIRIKKNEYSVP--RHINPVASALIRRMLHADPT 282
Query: 326 ARPTADQLLSHPFIT 340
RP+ +LL+ F T
Sbjct: 283 LRPSVAELLTDEFFT 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 12/271 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEI-RTLCEAPCNEGL 141
+++ G G +V++ ++ A+K + + R+++ T++ R + + +
Sbjct: 30 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 89
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ H AF G++ + L+++ GG L L + E + +L L +LH +
Sbjct: 90 VKLHYAF--QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL- 146
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
+++RD+KP N+L++ +G K+TDFG+S + +F GTV YM+PE + ++
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 206
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
AD WS G+ +FE TG P+ + M IL+ P Q SPE S + K
Sbjct: 207 SADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMILKAKLGMP--QFLSPEAQSLLRMLFK 263
Query: 322 KDAEARPTA-----DQLLSHPFITKYEHAKV 347
++ R A +++ H F + + K+
Sbjct: 264 RNPANRLGAGPDGVEEIKRHSFFSTIDWNKL 294
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 94
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 95 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 151
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 260 SYPADIWSIGLALFECGTGEFPY-AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A +EG + + LE P + F P+ V+
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLVEK 267
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 268 LLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 12/271 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEI-RTLCEAPCNEGL 141
+++ G G +V++ ++ A+K + + R+++ T++ R + + +
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ H AF G++ + L+++ GG L L + E + +L L +LH +
Sbjct: 89 VKLHYAF--QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL- 145
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
+++RD+KP N+L++ +G K+TDFG+S + +F GTV YM+PE + ++
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
AD WS G+ +FE TG P+ + M IL+ P Q SPE S + K
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMILKAKLGMP--QFLSPEAQSLLRMLFK 262
Query: 322 KDAEARPTA-----DQLLSHPFITKYEHAKV 347
++ R A +++ H F + + K+
Sbjct: 263 RNPANRLGAGPDGVEEIKRHSFFSTIDWNKL 293
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 64 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y
Sbjct: 119 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDY 175
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 226
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 10/255 (3%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G + + T + A K K + + ++ ++ TEI + ++ N +V FH
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPHVVGFH 108
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
G F D + + LE SL ++ + +K++ EP ++ +QG+ YLH R ++H
Sbjct: 109 GFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIH 165
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RD+K NL +N KI DFG++ +E GT Y++PE + + +S+ DI
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 266 WSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
WS+G L+ G+ P+ S ++I ++ P ++ +P + + L D
Sbjct: 226 WSLGCILYTLLVGKPPFETS-CLKETYIRIKKNEYSVP--RHINPVASALIRRMLHADPT 282
Query: 326 ARPTADQLLSHPFIT 340
RP+ +LL+ F T
Sbjct: 283 LRPSVAELLTDEFFT 297
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 66 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y
Sbjct: 121 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDY 177
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 228
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 28/281 (9%)
Query: 71 HSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL- 126
H K + A + I +G G V A + I+ALK + + EK +QL
Sbjct: 3 HMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 127 -TEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSS 185
EI++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 63 EVEIQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 117
Query: 186 MFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT 245
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S GT
Sbjct: 118 YITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGT 174
Query: 246 VTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+ Y+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISR 225
Query: 306 QNFS-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
F+ P+F + + LK + RP ++L HP+IT
Sbjct: 226 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 12/271 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEI-RTLCEAPCNEGL 141
+++ G G +V++ ++ A+K + + R+++ T++ R + + +
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ H AF G++ + L+++ GG L L + E + +L L +LH +
Sbjct: 89 VKLHYAFQT--EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL- 145
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
+++RD+KP N+L++ +G K+TDFG+S + +F GTV YM+PE + ++
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
AD WS G+ +FE TG P+ + M IL+ P Q SPE S + K
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMILKAKLGMP--QFLSPEAQSLLRMLFK 262
Query: 322 KDAEARPTA-----DQLLSHPFITKYEHAKV 347
++ R A +++ H F + + K+
Sbjct: 263 RNPANRLGAGPDGVEEIKRHSFFSTIDWNKL 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 18/257 (7%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
++ I IG+G+ V RA + + + F E+ N+ L E+ + + + +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREV-AIMKRLRHPNI 96
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILR---MQKSIPEPILSSMFKKLLQGLSYLH 198
V F GA P + +SI EY+ GSL +L ++ + E SM + +G++YLH
Sbjct: 97 VLFMGAVTQPPN--LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 199 GVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
+VHR++K NLLV+ K K+ DFG+S ++ + GT +M+PE +R+E
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 258 SYSYPADIWSIGLALFECGTGEFPY-----AASEGPVNLMLQILEDPSPSPSRQNFSPEF 312
+ +D++S G+ L+E T + P+ A V + LE P +N +P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP------RNLNPQV 268
Query: 313 CSFVDDCLKKDAEARPT 329
+ ++ C + RP+
Sbjct: 269 AAIIEGCWTNEPWKRPS 285
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 63 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 117
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y+ P
Sbjct: 118 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPP 174
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ ++ SR F+ P
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFP 225
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 62 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y
Sbjct: 117 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSCHAPSS--RRTTLSGTLDY 173
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 224
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 62 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y
Sbjct: 117 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRDTLCGTLDY 173
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 224
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 68 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 122
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y+ P
Sbjct: 123 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPP 179
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ ++ SR F+ P
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFP 230
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 231 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 265
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 141/288 (48%), Gaps = 20/288 (6%)
Query: 65 LADESDHSEKTYRCASHEMR-IFG---AIGSGASSVVQRAVHIPTHRIIALKKI-NIFEK 119
+A E+ S +++ + +++ IF +G+GA S V A T ++ A+K I K
Sbjct: 2 MARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALK 61
Query: 120 EKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIP 179
K + + EI L + +E +V + P+ + + ++ + GG L D + +
Sbjct: 62 GKESSIENEIAVLRKIK-HENIVALEDIYESPN--HLYLVMQLVSGGELFDRIVEKGFYT 118
Query: 180 EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV---NLKGRPKITDFGISAGLENSI 236
E S++ +++L + YLH + +VHRD+KP NLL + + + I+DFG+S +E
Sbjct: 119 EKDASTLIRQVLDAVYYLHRM-GIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKG 176
Query: 237 AMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA--LFECGTGEFPYAASEGPVNLMLQ 294
+ +T GT Y++PE + + YS D WSIG+ + CG +P E L Q
Sbjct: 177 DVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG---YPPFYDENDSKLFEQ 233
Query: 295 IL--EDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFIT 340
IL E SP + S F+ + ++KD R T +Q HP+I
Sbjct: 234 ILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 10/212 (4%)
Query: 77 RCASHEMRIFGAIGSGASSVVQ--RAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCE 134
+ + + +I +G+G+ V R+ H + + + K I + K+ + + R +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 135 APCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ ++ G F D+ QI + ++Y++GG L +LR + P P+ ++ L
Sbjct: 62 IVTHPFIIRMWGTF--QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 119
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN-SIAMCATFVGTVTYMSPER 253
YLH + +++RD+KP N+L++ G KITDFG + + + + +C GT Y++PE
Sbjct: 120 EYLHS-KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC----GTPDYIAPEV 174
Query: 254 IRNESYSYPADIWSIGLALFECGTGEFPYAAS 285
+ + Y+ D WS G+ ++E G P+ S
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 64 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y+ P
Sbjct: 119 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPP 175
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ ++ SR F+ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFP 226
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 17/272 (6%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAP 136
+ + + IG+G+ Q+ +I+ K+++ + E EK+ L++E+ L E
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ-MLVSEVNLLRELK 63
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL----RMQKSIPEPILSSMFKKLLQ 192
+ +V ++ + + I +EY +GG LA ++ + ++ + E + + +L
Sbjct: 64 -HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 193 GLSYLH----GVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
L H G ++HRD+KPAN+ ++ K K+ DFG++ L + FVGT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDP-SPSPSRQN 307
MSPE++ SY+ +DIWS+G L+E P+ A L +I E P R
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYR-- 239
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
+S E + L RP+ +++L +P I
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
IG+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EYM GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G K+ DFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 94
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 95 VKLY--FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 151
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A +FVGT Y+SPE + +S
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
S +D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFP--EKFFPKARDLVEK 267
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 268 LLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
IG+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EYM GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G K+ DFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKE-KRNQLLTEIRTLCEAPCNEGLVEFHG 146
+G+GA S V A T +++A+K I E K + EI L + + +V
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ G + + ++ + GG L D + + E S + ++L + YLH + +VHR
Sbjct: 84 IY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL-GIVHR 140
Query: 207 DIKPANLL---VNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
D+KP NLL ++ + I+DFG+S +E+ ++ +T GT Y++PE + + YS
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 264 DIWSIGLA--LFECGTGEFPYAASEGPVNLMLQIL--EDPSPSPSRQNFSPEFCSFVDDC 319
D WSIG+ + CG +P E L QIL E SP + S F+
Sbjct: 200 DCWSIGVIAYILLCG---YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 320 LKKDAEARPTADQLLSHPFIT 340
++KD E R T +Q L HP+I
Sbjct: 257 MEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKE-KRNQLLTEIRTLCEAPCNEGLVEFHG 146
+G+GA S V A T +++A+K I E K + EI L + + +V
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ G + + ++ + GG L D + + E S + ++L + YLH + +VHR
Sbjct: 84 IY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG-IVHR 140
Query: 207 DIKPANLL---VNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
D+KP NLL ++ + I+DFG+S +E+ ++ +T GT Y++PE + + YS
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 264 DIWSIGLA--LFECGTGEFPYAASEGPVNLMLQIL--EDPSPSPSRQNFSPEFCSFVDDC 319
D WSIG+ + CG +P E L QIL E SP + S F+
Sbjct: 200 DCWSIGVIAYILLCG---YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 320 LKKDAEARPTADQLLSHPFIT 340
++KD E R T +Q L HP+I
Sbjct: 257 MEKDPEKRFTCEQALQHPWIA 277
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 67 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H R ++HRDIKP NLL+ G KI DFG S +S A GT+ Y+ P
Sbjct: 122 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLDYLPP 178
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ ++ SR F+ P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFP 229
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 64 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H R ++HRDIKP NLL+ G KI DFG S +S A GT+ Y+ P
Sbjct: 119 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLDYLPP 175
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ ++ SR F+ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFP 226
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKE-KRNQLLTEIRTLCEAPCNEGLVEFHG 146
+G+GA S V A T +++A+K I E K + EI L + + +V
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ G + + ++ + GG L D + + E S + ++L + YLH + +VHR
Sbjct: 84 IY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG-IVHR 140
Query: 207 DIKPANLL---VNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
D+KP NLL ++ + I+DFG+S +E+ ++ +T GT Y++PE + + YS
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 264 DIWSIGLA--LFECGTGEFPYAASEGPVNLMLQIL--EDPSPSPSRQNFSPEFCSFVDDC 319
D WSIG+ + CG +P E L QIL E SP + S F+
Sbjct: 200 DCWSIGVIAYILLCG---YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 320 LKKDAEARPTADQLLSHPFIT 340
++KD E R T +Q L HP+I
Sbjct: 257 MEKDPEKRFTCEQALQHPWIA 277
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKE-KRNQLLTEIRTLCEAPCNEGLVEFHG 146
+G+GA S V A T +++A+K I E K + EI L + + +V
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ G + + ++ + GG L D + + E S + ++L + YLH + +VHR
Sbjct: 84 IY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG-IVHR 140
Query: 207 DIKPANLL---VNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
D+KP NLL ++ + I+DFG+S +E+ ++ +T GT Y++PE + + YS
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 264 DIWSIGLA--LFECGTGEFPYAASEGPVNLMLQIL--EDPSPSPSRQNFSPEFCSFVDDC 319
D WSIG+ + CG +P E L QIL E SP + S F+
Sbjct: 200 DCWSIGVIAYILLCG---YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 320 LKKDAEARPTADQLLSHPFIT 340
++KD E R T +Q L HP+I
Sbjct: 257 MEKDPEKRFTCEQALQHPWIA 277
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A I+ALK + + EK +QL EI++
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 61 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 115
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H R ++HRDIKP NLL+ G KI DFG S +S T GT+ Y+ P
Sbjct: 116 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPP 172
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ ++ SR F+ P
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFP 223
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 224 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 258
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 63 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI +FG S +S T GT+ Y
Sbjct: 118 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS--RRTTLCGTLDY 174
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 225
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 64 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI +FG S +S T GT+ Y
Sbjct: 119 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS--RRTTLCGTLDY 175
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 226
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 16/272 (5%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRNQLLTEIRTLC 133
R +E +G G V T R A LKK I K++ LTE R L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL- 62
Query: 134 EAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG 193
+ + L +F D ++ +EY +GG L L ++ E +++
Sbjct: 63 QNSRHPFLTALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 120
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGI-SAGLENSIAMCATFVGTVTYMSPE 252
L YLH +++V+RD+K NL+++ G KITDFG+ G+++ M F GT Y++PE
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-KXFCGTPEYLAPE 179
Query: 253 RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEF 312
+ + Y D W +G+ ++E G P+ + L ++E+ + PE
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEA 236
Query: 313 CSFVDDCLKKDAEAR-----PTADQLLSHPFI 339
S + LKKD + R A +++ H F
Sbjct: 237 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 81 HEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPC 137
+ + IG G+ + V T RI A++ + + + E + + TE +A
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+ LV H F ++ +EY++GG L ++ Q+ +PE ++ L+YL
Sbjct: 112 HPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
H R +++RD+K N+L++ +G K+TD+G+ +TF GT Y++PE +R E
Sbjct: 170 HE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 258 SYSYPADIWSIGLALFECGTGEFPY---AASEGP 288
Y + D W++G+ +FE G P+ +S+ P
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 16/272 (5%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRNQLLTEIRTLC 133
R +E +G G V T R A LKK I K++ LTE R L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL- 63
Query: 134 EAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG 193
+ + L +F D ++ +EY +GG L L ++ E +++
Sbjct: 64 QNSRHPFLTALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 121
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGI-SAGLENSIAMCATFVGTVTYMSPE 252
L YLH +++V+RD+K NL+++ G KITDFG+ G+++ M F GT Y++PE
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-KXFCGTPEYLAPE 180
Query: 253 RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEF 312
+ + Y D W +G+ ++E G P+ + L ++E+ + PE
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEA 237
Query: 313 CSFVDDCLKKDAEAR-----PTADQLLSHPFI 339
S + LKKD + R A +++ H F
Sbjct: 238 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G + L+ E ++
Sbjct: 66 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S GT+ Y
Sbjct: 121 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRXXLXGTLDY 177
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 228
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 64 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTV 246
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S +C GT+
Sbjct: 119 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTL 173
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ 306
Y+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRV 224
Query: 307 NFS-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
F+ P+F + + LK + RP ++L HP+IT
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 141/304 (46%), Gaps = 42/304 (13%)
Query: 79 ASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
+S + + +G+G + V + ++ T +ALK++ + +E +L + +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL--RMQKSIPEPILSSMFK----KLLQ 192
E +V + + + ++++ E+MD L + R + P + ++ K +LLQ
Sbjct: 63 ENIVRLYDVIHTEN--KLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 193 GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPE 252
GL++ H + ++HRD+KP NLL+N +G+ K+ DFG++ + ++ V T+ Y +P+
Sbjct: 120 GLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 253 RIR-NESYSYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSPS--PS--- 304
+ + +YS DIWS G L E TG+ FP E + L+ I+ P+ S PS
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 305 ----------------RQNFSPE--------FCSFVDDCLKKDAEARPTADQLLSHPFIT 340
RQ P F+ L+ + + R +A Q L HP+
Sbjct: 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
Query: 341 KYEH 344
+Y H
Sbjct: 299 EYYH 302
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 91
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 92 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 148
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A +FVGT Y+SPE + +S
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 264
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 265 LLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 90
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 91 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 147
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
L++RD+KP NLL++ +G ++TDFG + ++ T GT Y++PE I ++ Y+
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKA 204
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 261
Query: 323 DAEAR 327
D R
Sbjct: 262 DLTKR 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 61 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S GT+ Y
Sbjct: 116 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDY 172
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 223
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 16/272 (5%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRNQLLTEIRTLC 133
R +E +G G V T R A LKK I K++ LTE R L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL- 64
Query: 134 EAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG 193
+ + L +F D ++ +EY +GG L L ++ E +++
Sbjct: 65 QNSRHPFLTALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 122
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGI-SAGLENSIAMCATFVGTVTYMSPE 252
L YLH +++V+RD+K NL+++ G KITDFG+ G+++ M F GT Y++PE
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-KXFCGTPEYLAPE 181
Query: 253 RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEF 312
+ + Y D W +G+ ++E G P+ + L ++E+ + PE
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLGPEA 238
Query: 313 CSFVDDCLKKDAEAR-----PTADQLLSHPFI 339
S + LKKD + R A +++ H F
Sbjct: 239 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 63 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTV 246
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S +C GT+
Sbjct: 118 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTL 172
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ 306
Y+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRV 223
Query: 307 NFS-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
F+ P+F + + LK + RP ++L HP+IT
Sbjct: 224 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 263
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
L++RD+KP NLL++ +G ++TDFG + ++ T GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 323 DAEAR 327
D R
Sbjct: 277 DLTKR 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 9/214 (4%)
Query: 81 HEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPC 137
+ + IG G+ + V T RI A+K + + + E + + TE +A
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+ LV H F ++ +EY++GG L ++ Q+ +PE ++ L+YL
Sbjct: 80 HPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
H R +++RD+K N+L++ +G K+TD+G+ + F GT Y++PE +R E
Sbjct: 138 HE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 258 SYSYPADIWSIGLALFECGTGEFPY---AASEGP 288
Y + D W++G+ +FE G P+ +S+ P
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TE 128
K + A + I +G G V A + I+ALK + + EK +QL E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
I++ P ++ +G F+ D+ ++ + LEY G++ L+ E ++
Sbjct: 62 IQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
+L LSY H R ++HRDIKP NLL+ G KI DFG S +S GT+ Y
Sbjct: 117 ELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDY 173
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+ PE I + D+WS+G+ +E G+ P+ A+ ++ SR F
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEF 224
Query: 309 S-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+ P+F + + LK + RP ++L HP+IT
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 9/214 (4%)
Query: 81 HEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPC 137
+ + IG G+ + V T RI A+K + + + E + + TE +A
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+ LV H F ++ +EY++GG L ++ Q+ +PE ++ L+YL
Sbjct: 69 HPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
H R +++RD+K N+L++ +G K+TD+G+ + F GT Y++PE +R E
Sbjct: 127 HE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 258 SYSYPADIWSIGLALFECGTGEFPY---AASEGP 288
Y + D W++G+ +FE G P+ +S+ P
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 155 QISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLH--GVRHLVHRDIKPAN 212
+ + +E+ GG L +L K IP IL + ++ +G++YLH + ++HRD+K +N
Sbjct: 80 NLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 213 LLVNLKGRP--------KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
+L+ K KITDFG++ + M A G +M+PE IR +S +D
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA--GAYAWMAPEVIRASMFSKGSD 196
Query: 265 IWSIGLALFECGTGEFPYAASEG---PVNLMLQILEDPSPSPSRQNFSPE-FCSFVDDCL 320
+WS G+ L+E TGE P+ +G + + L P PS PE F ++DC
Sbjct: 197 VWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST-----CPEPFAKLMEDCW 251
Query: 321 KKDAEARPTADQLLSH 336
D +RP+ +L
Sbjct: 252 NPDPHSRPSFTNILDQ 267
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 9/214 (4%)
Query: 81 HEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPC 137
+ + IG G+ + V T RI A+K + + + E + + TE +A
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+ LV H F ++ +EY++GG L ++ Q+ +PE ++ L+YL
Sbjct: 65 HPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
H R +++RD+K N+L++ +G K+TD+G+ + F GT Y++PE +R E
Sbjct: 123 HE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 258 SYSYPADIWSIGLALFECGTGEFPY---AASEGP 288
Y + D W++G+ +FE G P+ +S+ P
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 91
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 92 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 148
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 264
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 265 LLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 28/286 (9%)
Query: 66 ADESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---R 122
+ + + K + A + I +G G V A + I+ALK + + EK
Sbjct: 19 SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 78
Query: 123 NQLL--TEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPE 180
+QL EI++ P ++ +G F+ D+ ++ + LEY G++ L+ E
Sbjct: 79 HQLRREVEIQSHLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDE 133
Query: 181 PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA 240
++ +L LSY H R ++HRDIKP NLL+ G KI DFG S +S
Sbjct: 134 QRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRD 190
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPS 300
GT+ Y+ PE I + D+WS+G+ +E G+ P+ A+ ++
Sbjct: 191 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETY 241
Query: 301 PSPSRQNFS-PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
SR F+ P+F + + LK + RP ++L HP+IT
Sbjct: 242 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 287
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 64 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTVTYM 249
LSY H R ++HRDIKP NLL+ G KI DFG S +S +C GT+ Y+
Sbjct: 119 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYL 173
Query: 250 SPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS 309
PE I + D+WS+G+ +E G+ P+ A+ ++ SR F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFT 224
Query: 310 -PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
P+F + + LK + RP ++L HP+IT
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 25/300 (8%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRNQLLTEIRTLCEAPCNE 139
+R+ G G G V++ T +I A LKK I K R + E +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHG 199
+V+ AF G++ + LEY+ GG L L + E ++ L +LH
Sbjct: 82 FIVDLIYAFQT--GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
+ +++RD+KP N+++N +G K+TDFG+ + + TF GT+ YM+PE + +
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDC 319
+ D WS+G +++ TG P+ E + +IL+ + N P D
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTG-ENRKKTIDKILK------CKLNLPPYLTQEARDL 251
Query: 320 LKK----DAEAR-----PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMKDLADVS 370
LKK +A +R A ++ +HPF ++ LA V F P+ ++ DVS
Sbjct: 252 LKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEEL-LARKVEPPFKPL--LQSEEDVS 308
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 95
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 96 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 152
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A +FVGT Y+SPE + +S
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFP--EKFFPKARDLVEK 268
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 269 LLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 64 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTVTYM 249
LSY H R ++HRDIKP NLL+ G KI DFG S +S +C GT+ Y+
Sbjct: 119 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYL 173
Query: 250 SPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS 309
PE I + D+WS+G+ +E G+ P+ A+ ++ SR F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFT 224
Query: 310 -PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
P+F + + LK + RP ++L HP+IT
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 76
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 77 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 133
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 249
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 250 LLVLDATKRLGCEEMEGYGPLKAHPFF 276
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 28/275 (10%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 64 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSP 251
LSY H R ++HRDIKP NLL+ G KI DFG S +S GT+ Y+ P
Sbjct: 119 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPP 175
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-P 310
E I + D+WS+G+ +E G+ P+ A+ ++ SR F+ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTFP 226
Query: 311 EFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
+F + + LK + RP ++L HP+IT
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 92
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 93 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 149
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 265
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 266 LLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 64 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTVTYM 249
LSY H R ++HRDIKP NLL+ G KI DFG S +S +C GT+ Y+
Sbjct: 119 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDYL 173
Query: 250 SPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS 309
PE I + D+WS+G+ +E G+ P+ A+ ++ SR F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFT 224
Query: 310 -PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
P+F + + LK + RP ++L HP+IT
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 94
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 95 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 151
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 267
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 268 LLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 92
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 93 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 149
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 265
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 266 LLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
IG+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G K+ DFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 70
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 71 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 127
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFP--EKFFPKARDLVEK 243
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 244 LLVLDATKRLGCEEMEGYGPLKAHPFF 270
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 92
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 93 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 149
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 265
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 266 LLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 69
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 70 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 126
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFP--EKFFPKARDLVEK 242
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 243 LLVLDATKRLGCEEMEGYGPLKAHPFF 269
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 94
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 95 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 151
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 267
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 268 LLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 151 PDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKP 210
P+ + + E ++ G + ++ + K + E F+ L++G+ YLH + ++HRDIKP
Sbjct: 108 PNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLH-YQKIIHRDIKP 165
Query: 211 ANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA---DIWS 267
+NLLV G KI DFG+S + S A+ + VGT +M+PE + + D+W+
Sbjct: 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWA 225
Query: 268 IGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR 327
+G+ L+ G+ P+ E + L +I P + + + + + L K+ E+R
Sbjct: 226 MGVTLYCFVFGQCPF-MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESR 284
Query: 328 PTADQLLSHPFITK 341
++ HP++T+
Sbjct: 285 IVVPEIKLHPWVTR 298
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 94
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 95 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 151
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 267
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 268 LLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 95
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 96 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 152
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 268
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 269 LLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NL+++ +G K+TDFG++ ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 71
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 72 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 128
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFP--EKFFPKARDLVEK 244
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 245 LLVLDATKRLGCEEMEGYGPLKAHPFF 271
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 122 RNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP 181
R ++ E+ L + + ++ H + + + + LE + GG L D L ++S+ E
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLENSIA 237
+S K++L G++YLH + + H D+KP N+++ K P K+ DFG++ +E+ +
Sbjct: 116 EATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE 297
F GT +++PE + E AD+WSIG+ + +G P+ L
Sbjct: 175 FKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ 227
Query: 298 DPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARPTADQLLSHPFIT 340
+ + +F EF S F+ L K+ R T + L HP+IT
Sbjct: 228 -ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 122 RNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP 181
R ++ E+ L + + ++ H + + + + LE + GG L D L ++S+ E
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLENSIA 237
+S K++L G++YLH + + H D+KP N+++ K P K+ DFG++ +E+ +
Sbjct: 116 EATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE 297
F GT +++PE + E AD+WSIG+ + +G P+ L
Sbjct: 175 FKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ 227
Query: 298 DPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARPTADQLLSHPFIT 340
+ + +F EF S F+ L K+ R T + L HP+IT
Sbjct: 228 -ANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 35/272 (12%)
Query: 89 IGSGASSVV----------QRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAP 136
+GSGA V +RA+ I +KK ++ LL E+ L + P
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKI-------IKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L EF D + +E GG L D + +++ E + + K++L G +Y
Sbjct: 82 NIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPER 253
LH ++VHRD+KP NLL+ K R KI DFG+SA E M +GT Y++PE
Sbjct: 137 LHK-HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-KERLGTAYYIAPEV 194
Query: 254 IRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS---PSRQNFSP 310
+R + Y D+WS G+ L+ G P+ +L+ +E S P S
Sbjct: 195 LRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTD--QEILKRVEKGKFSFDPPDWTQVSD 251
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
E V L + R +A++ L+HP+I K+
Sbjct: 252 EAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 283
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 122 RNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP 181
R ++ E+ L + + ++ H + + + + LE + GG L D L ++S+ E
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLENSIA 237
+S K++L G++YLH + + H D+KP N+++ K P K+ DFG++ +E+ +
Sbjct: 116 EATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE 297
F GT +++PE + E AD+WSIG+ + +G P+ L
Sbjct: 175 FKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ 227
Query: 298 DPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARPTADQLLSHPFIT 340
+ + +F EF S F+ L K+ R T + L HP+IT
Sbjct: 228 -ANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 122 RNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP 181
R ++ E+ L + + ++ H + + + + LE + GG L D L ++S+ E
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLENSIA 237
+S K++L G++YLH + + H D+KP N+++ K P K+ DFG++ +E+ +
Sbjct: 116 EATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE 297
F GT +++PE + E AD+WSIG+ + +G P+ L
Sbjct: 175 FKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ 227
Query: 298 DPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARPTADQLLSHPFIT 340
+ + +F EF S F+ L K+ R T + L HP+IT
Sbjct: 228 -ANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 150 MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIK 209
+ DS I E GG L D + +K E + + K++ G++Y+H ++VHRD+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK-HNIVHRDLK 148
Query: 210 PANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
P N+L+ K + KI DFG+S + + M +GT Y++PE +R +Y D+W
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRG-TYDEKCDVW 206
Query: 267 SIGLALFECGTGEFP-YAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
S G+ L+ +G P Y +E + ++ + P + S + + L
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 326 ARPTADQLLSHPFITKY 342
R TA Q L HP+I KY
Sbjct: 267 LRITATQCLEHPWIQKY 283
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 99
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 100 VKLY--FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 156
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 272
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 273 LLVLDATKRLGCEEMEGYGPLKAHPFF 299
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 35/272 (12%)
Query: 89 IGSGASSVV----------QRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAP 136
+GSGA V +RA+ I +KK ++ LL E+ L + P
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKI-------IKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L EF D + +E GG L D + +++ E + + K++L G +Y
Sbjct: 65 NIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 119
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPER 253
LH ++VHRD+KP NLL+ K R KI DFG+SA E M +GT Y++PE
Sbjct: 120 LHK-HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-KERLGTAYYIAPEV 177
Query: 254 IRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS---PSRQNFSP 310
+R + Y D+WS G+ L+ G P+ +L+ +E S P S
Sbjct: 178 LRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQE--ILKRVEKGKFSFDPPDWTQVSD 234
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
E V L + R +A++ L+HP+I K+
Sbjct: 235 EAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 266
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 122 RNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP 181
R ++ E+ L + + ++ H + + + + LE + GG L D L ++S+ E
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLENSIA 237
+S K++L G++YLH + + H D+KP N+++ K P K+ DFG++ +E+ +
Sbjct: 116 EATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE 297
F GT +++PE + E AD+WSIG+ + +G P+ L
Sbjct: 175 FKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------ 227
Query: 298 DPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARPTADQLLSHPFIT 340
+ + +F EF S F+ L K+ R T + L HP+IT
Sbjct: 228 -ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 77 RCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRT 131
+ A + I +G G V A + I+ALK + + EK +QL EI++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLL 191
P ++ +G F+ D+ ++ + LEY G++ L+ E ++ +L
Sbjct: 67 HLRHP---NILRLYGYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA--MCATFVGTVTYM 249
LSY H R ++HRDIKP NLL+ G KI DFG S +S +C GT+ Y+
Sbjct: 122 NALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYL 176
Query: 250 SPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS 309
PE I + D+WS+G+ +E G+ P+ A+ ++ SR F+
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFT 227
Query: 310 -PEFCS-----FVDDCLKKDAEARPTADQLLSHPFIT 340
P+F + + LK + RP ++L HP+IT
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 19/264 (7%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
I +GSGA VV R V T R+ K IN + + EI + + + L+
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINL 113
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHL 203
H AF D ++ + LE++ GG L D + + + E + + ++ +GL ++H +
Sbjct: 114 HDAF--EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-HSI 170
Query: 204 VHRDIKPANLLVNLK--GRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
VH DIKP N++ K KI DFG++ L N + T + +PE + E +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKL-NPDEIVKVTTATAEFAAPEIVDREPVGF 229
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLM------LQILEDPSPSPSRQNFSPEFCSF 315
D+W+IG+ + +G P+A + L + ED S SPE F
Sbjct: 230 YTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS-----VSPEAKDF 284
Query: 316 VDDCLKKDAEARPTADQLLSHPFI 339
+ + L+K+ R T L HP++
Sbjct: 285 IKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 150 MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIK 209
+ DS I E GG L D + +K E + + K++ G++Y+H ++VHRD+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK-HNIVHRDLK 148
Query: 210 PANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
P N+L+ K + KI DFG+S + + M +GT Y++PE +R +Y D+W
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRG-TYDEKCDVW 206
Query: 267 SIGLALFECGTGEFP-YAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
S G+ L+ +G P Y +E + ++ + P + S + + L
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 326 ARPTADQLLSHPFITKY 342
R TA Q L HP+I KY
Sbjct: 267 LRITATQCLEHPWIQKY 283
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 72
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 73 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 129
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFP--EKFFPKARDLVEK 245
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 246 LLVLDATKRLGCEEMEGYGPLKAHPFF 272
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 9/201 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
+G G+ S+ ++ VH +++ A+K I+ + + +T ++ LCE N +V+ H F
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALK-LCEGHPN--IVKLHEVF 75
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDI 208
+ D + +E ++GG L + ++ +K E S + +KL+ +S++H V +VHRD+
Sbjct: 76 H--DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDL 132
Query: 209 KPANLLV---NLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
KP NLL N KI DFG + T T+ Y +PE + Y D+
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDL 192
Query: 266 WSIGLALFECGTGEFPYAASE 286
WS+G+ L+ +G+ P+ + +
Sbjct: 193 WSLGVILYTMLSGQVPFQSHD 213
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NL+++ +G K+TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NL+++ +G K+TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 12/262 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+++ G G +V+ + + L+K I K++ +TE R L + + L
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLT 71
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
AF D ++ +EY +GG L L ++ E +++ L YLH R
Sbjct: 72 ALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD 128
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+V+RDIK NL+++ G KITDFG+ + A TF GT Y++PE + + Y
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 188
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W +G+ ++E G P+ + L ++E+ + SPE S + LKK
Sbjct: 189 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKK 245
Query: 323 DAEAR-----PTADQLLSHPFI 339
D + R A +++ H F
Sbjct: 246 DPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 12/262 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+++ G G +V+ + + L+K I K++ +TE R L + + L
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLT 68
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
AF D ++ +EY +GG L L ++ E +++ L YLH R
Sbjct: 69 ALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD 125
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+V+RDIK NL+++ G KITDFG+ + A TF GT Y++PE + + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W +G+ ++E G P+ + L ++E+ + SPE S + LKK
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKK 242
Query: 323 DAEAR-----PTADQLLSHPFI 339
D + R A +++ H F
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 28/262 (10%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRTLCEAPCNEGLVE 143
+G G V A + I+ALK + + EK +QL EI++ P ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP---NILR 76
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
+G F+ D+ ++ + LEY G++ L+ E ++ +L LSY H R +
Sbjct: 77 LYGYFH--DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR-V 133
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRDIKP NLL+ G KI DFG S +S T GT+ Y+ PE I +
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 264 DIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-PEFCS-----FVD 317
D+WS+G+ +E G P+ A ++ SR F+ P+F + +
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEA---------HTYQETYRRISRVEFTFPDFVTEGARDLIS 242
Query: 318 DCLKKDAEARPTADQLLSHPFI 339
LK +A R T ++L HP+I
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWI 264
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 12/262 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+++ G G +V+ + + L+K I K++ +TE R L + + L
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLT 68
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
AF D ++ +EY +GG L L ++ E +++ L YLH R
Sbjct: 69 ALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD 125
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+V+RDIK NL+++ G KITDFG+ + A TF GT Y++PE + + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W +G+ ++E G P+ + L ++E+ + SPE S + LKK
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKK 242
Query: 323 DAEAR-----PTADQLLSHPFI 339
D + R A +++ H F
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 81 HEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG 140
H +++ G G + + + + L+K I +K++ +++E L + +
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
LV H +F D ++ L+Y++GG L L+ ++ EP ++ L YLH +
Sbjct: 101 LVGLHFSFQTAD--KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYS 260
++V+RD+KP N+L++ +G +TDFG+ + +TF GT Y++PE + + Y
Sbjct: 159 -NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 261 YPADIWSIGLALFECGTGEFPY 282
D W +G L+E G P+
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + LEY GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G K+ DFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ---LLTEIR 130
K + + I IG GA V T RI A+K +N +E KR + E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 131 TLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKK 189
L C + + H AF D + + ++Y GG L +L + + +PE + +
Sbjct: 127 VLVNGDC-QWITALHYAF--QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 183
Query: 190 LLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTY 248
++ + +H + H VHRDIKP N+L+++ G ++ DFG + ++ + VGT Y
Sbjct: 184 MVLAIDSIHQL-HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 249 MSPERIRNE-----SYSYPADIWSIGLALFECGTGEFPYAA 284
+SPE ++ Y D WS+G+ ++E GE P+ A
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 150 MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIK 209
+ DS I E GG L D + +K E + + K++ G++Y+H ++VHRD+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK-HNIVHRDLK 148
Query: 210 PANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
P N+L+ K + KI DFG+S + + M +GT Y++PE +R +Y D+W
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRG-TYDEKCDVW 206
Query: 267 SIGLALFECGTGEFP-YAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
S G+ L+ +G P Y +E + ++ + P + S + + L
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 326 ARPTADQLLSHPFITKY 342
R TA Q L HP+I KY
Sbjct: 267 LRITATQCLEHPWIQKY 283
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEYSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S V A + T R A+K K +I KE + +T R + +
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 97
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 98 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 154
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P+ F P+ V+
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPA--AFFPKARDLVEK 270
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 271 LLVLDATKRLGCEEMEGYGPLKAHPFF 297
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ---LLTEIR 130
K + + I IG GA V T RI A+K +N +E KR + E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 131 TLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKK 189
L C + + H AF D + + ++Y GG L +L + + +PE + +
Sbjct: 143 VLVNGDC-QWITALHYAF--QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 199
Query: 190 LLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTY 248
++ + +H + H VHRDIKP N+L+++ G ++ DFG + ++ + VGT Y
Sbjct: 200 MVLAIDSIHQL-HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 249 MSPERIRNES-----YSYPADIWSIGLALFECGTGEFPYAA 284
+SPE ++ Y D WS+G+ ++E GE P+ A
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 299
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHG 199
++ H + + + + LE + GG L D L ++S+ E +S K++L G++YLH
Sbjct: 76 NIITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH- 132
Query: 200 VRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIR 255
+ + H D+KP N+++ K P K+ DFG++ +E+ + F GT +++PE +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIVN 191
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS- 314
E AD+WSIG+ + +G P+ L + + +F EF S
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-------ANITAVSYDFDEEFFSQ 244
Query: 315 -------FVDDCLKKDAEARPTADQLLSHPFIT 340
F+ L K+ R T + L HP+IT
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 126 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 182
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
L++RD+KP NLL++ +G ++TDFG + ++ + T GT Y++PE I ++ Y+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA---TWTLCGTPEYLAPEIILSKGYNKA 239
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 296
Query: 323 DAEAR 327
D R
Sbjct: 297 DLTKR 301
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEYSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEYSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF--- 144
+G+G+ V H+ T A+K I +K+K +L TL E + V F
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQA-VNFPFL 104
Query: 145 -HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F D+ + + +EY GG + LR EP +++ YLH + L
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-DL 163
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSYP 262
++RD+KP NL+++ +G K+TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKA 219
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 323 DAEAR 327
D R
Sbjct: 277 DLTKR 281
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 21/267 (7%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
FG I G G+ S A + T R A+K K +I KE + +T R + +
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFF 92
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
V+ + F D ++ L Y G L +R S E +++ L YLHG +
Sbjct: 93 VKLY--FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG-K 149
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESY 259
++HRD+KP N+L+N +ITDFG + L E+ A FVGT Y+SPE + +S
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQ-ILEDPSPSPSRQNFSPEFCSFVDD 318
+D+W++G +++ G P+ A G L+ Q I++ P + F P+ V+
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEK--FFPKARDLVEK 265
Query: 319 CLKKDAEARPTADQ------LLSHPFI 339
L DA R ++ L +HPF
Sbjct: 266 LLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF--- 144
+G+G+ V H+ T A+K I +K+K +L TL E + V F
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQA-VNFPFL 104
Query: 145 -HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F D+ + + +EY GG + LR EP +++ YLH + L
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-DL 163
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSYP 262
++RD+KP NL+++ +G K+TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKA 219
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 323 DAEAR 327
D R
Sbjct: 277 DLTKR 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NL+++ +G ++TDFG++ ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF--- 144
+G+G+ V H+ T A+K I +K+K +L TL E + V F
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQA-VNFPFL 104
Query: 145 -HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F D+ + + +EY GG + LR EP +++ YLH + L
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-DL 163
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSYP 262
++RD+KP NL+++ +G K+TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKA 219
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 323 DAEAR 327
D R
Sbjct: 277 DLTKR 281
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 28/262 (10%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK---RNQLL--TEIRTLCEAPCNEGLVE 143
+G G V A + I+ALK + + EK +QL EI++ P ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP---NILR 76
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
+G F+ D+ ++ + LEY G++ L+ E ++ +L LSY H R +
Sbjct: 77 LYGYFH--DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR-V 133
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRDIKP NLL+ G KI DFG S +S T GT+ Y+ PE I +
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSS--RRDTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 264 DIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-PEFCS-----FVD 317
D+WS+G+ +E G P+ A ++ SR F+ P+F + +
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEA---------HTYQETYRRISRVEFTFPDFVTEGARDLIS 242
Query: 318 DCLKKDAEARPTADQLLSHPFI 339
LK +A R T ++L HP+I
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWI 264
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 35/284 (12%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK--RNQLLTEIRTLCEAPCNEGLVE 143
G IG G+ VV + + T +I+A+KK E + + L EIR L + + LV
Sbjct: 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNLVN 66
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F ++ + EY D L ++ R Q+ +PE ++ S+ + LQ +++ H +
Sbjct: 67 LLEVFRR--KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK-HNC 123
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES-YSYP 262
+HRD+KP N+L+ K+ DFG + L V T Y SPE + ++ Y P
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP 183
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSPS----------------PS 304
D+W+IG E +G +P + + L+ + L D P P
Sbjct: 184 VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243
Query: 305 RQNFSPEFCSF----------VDDCLKKDAEARPTADQLLSHPF 338
++ P F + CL D R T +QLL HP+
Sbjct: 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 25/300 (8%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRNQLLTEIRTLCEAPCNE 139
+R+ G G G V++ T +I A LKK I K R + E +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHG 199
+V+ AF G++ + LEY+ GG L L + E ++ L +LH
Sbjct: 82 FIVDLIYAFQT--GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ 139
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
+ +++RD+KP N+++N +G K+TDFG+ + + F GT+ YM+PE + +
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDC 319
+ D WS+G +++ TG P+ E + +IL+ + N P D
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTG-ENRKKTIDKILK------CKLNLPPYLTQEARDL 251
Query: 320 LKK----DAEAR-----PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMKDLADVS 370
LKK +A +R A ++ +HPF ++ LA V F P+ ++ DVS
Sbjct: 252 LKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEEL-LARKVEPPFKPL--LQSEEDVS 308
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ--LLTEIRT 131
K R + I IG GA V ++ A+K +N +E KR + E R
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKL 190
+ ++ + H AF D + + ++Y GG L +L + + +PE + ++
Sbjct: 127 VLVNGDSKWITTLHYAF--QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL-ENSIAMCATFVGTVTYM 249
+ + +H + H VHRDIKP N+L+++ G ++ DFG L E+ + VGT Y+
Sbjct: 185 VIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 250 SPERIR-----NESYSYPADIWSIGLALFECGTGEFPYAA 284
SPE ++ Y D WS+G+ ++E GE P+ A
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 98 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 154
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 210
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 267
Query: 322 KDAEAR 327
D R
Sbjct: 268 VDLTKR 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A E P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADE-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 69 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 126 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 182
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 238
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 295
Query: 322 KDAEAR 327
D R
Sbjct: 296 VDLTKR 301
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 98 KLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 154
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 210
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 267
Query: 322 KDAEAR 327
D R
Sbjct: 268 VDLTKR 273
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H+ T A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NL+++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H T A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NL+++ +G K+TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
L++RD+KP NLL++ +G ++TDFG + ++ A GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA---GTPEYLAPEIILSKGYNKA 218
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 323 DAEAR 327
D R
Sbjct: 276 DLTKR 280
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 12/262 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+++ G G +V+ + + L+K I K++ +TE R L + + L
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLT 68
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
AF D ++ +EY +GG L L ++ E +++ L YLH R
Sbjct: 69 ALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD 125
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+V+RDIK NL+++ G KITDFG+ + A F GT Y++PE + + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W +G+ ++E G P+ + L ++E+ + SPE S + LKK
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKK 242
Query: 323 DAEAR-----PTADQLLSHPFI 339
D + R A +++ H F
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 12/262 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+++ G G +V+ + + L+K I K++ +TE R L + + L
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLT 68
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
AF D ++ +EY +GG L L ++ E +++ L YLH R
Sbjct: 69 ALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD 125
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+V+RDIK NL+++ G KITDFG+ + A F GT Y++PE + + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W +G+ ++E G P+ + L ++E+ + SPE S + LKK
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKK 242
Query: 323 DAEAR-----PTADQLLSHPFI 339
D + R A +++ H F
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 12/262 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+++ G G +V+ + + L+K I K++ +TE R L + + L
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLT 73
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
AF D ++ +EY +GG L L ++ E +++ L YLH R
Sbjct: 74 ALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD 130
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+V+RDIK NL+++ G KITDFG+ + A F GT Y++PE + + Y
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W +G+ ++E G P+ + L ++E+ + SPE S + LKK
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKK 247
Query: 323 DAEAR-----PTADQLLSHPFI 339
D + R A +++ H F
Sbjct: 248 DPKQRLGGGPSDAKEVMEHRFF 269
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
+G GA + VQ AV + + A+K I R+++ E+ TL + N+ ++E
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL--IE 78
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDI 208
+ D + + E + GGS+ ++ QK E S + + + L +LH + + HRD+
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH-TKGIAHRDL 137
Query: 209 KPANLLVNL--KGRP-KITDFGISAG--LENSIA-----MCATFVGTVTYMSPERI---- 254
KP N+L K P KI DF + +G L NS T G+ YM+PE +
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 255 -RNESYSYPADIWSIGLALFECGTGEFPYAASEGP-------------VNLMLQILEDPS 300
+ Y D+WS+G+ L+ +G P+ G N + + +++
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 301 ---PSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
P + S E + L +DA+ R +A Q+L HP++
Sbjct: 258 YEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 12/262 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+++ G G +V+ + + L+K I K++ +TE R L + + L
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL-QNTRHPFLT 68
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
AF D ++ +EY +GG L L ++ E +++ L YLH R
Sbjct: 69 ALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD 125
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+V+RDIK NL+++ G KITDFG+ + A F GT Y++PE + + Y
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W +G+ ++E G P+ + L ++E+ + SPE S + LKK
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKK 242
Query: 323 DAEAR-----PTADQLLSHPFI 339
D + R A +++ H F
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 150/323 (46%), Gaps = 27/323 (8%)
Query: 66 ADESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKR 122
A+ + H+EK +++ G G +V++ T ++ A LKK I +K K
Sbjct: 42 ANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKT 101
Query: 123 NQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP 181
+ TE + L + LV H AF ++ + L+Y++GG L L ++ E
Sbjct: 102 TEHTRTERQVLEHIRQSPFLVTLHYAFQT--ETKLHLILDYINGGELFTHLSQRERFTEH 159
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAG-LENSIAMCA 240
+ +++ L +LH + +++RDIK N+L++ G +TDFG+S + +
Sbjct: 160 EVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 218
Query: 241 TFVGTVTYMSPERIR--NESYSYPADIWSIGLALFECGTGEFPYAASEGPVN----LMLQ 294
F GT+ YM+P+ +R + + D WS+G+ ++E TG P+ +G N + +
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV-DGEKNSQAEISRR 277
Query: 295 ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR-----PTADQLLSHPFITKYEHAKVDL 349
IL+ P P Q S + L KD + R AD++ H F K DL
Sbjct: 278 ILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD--DL 333
Query: 350 AA-FVRSVFDPMQRMKDLADVST 371
AA V + F P+ ++D DVS
Sbjct: 334 AAKKVPAPFKPV--IRDELDVSN 354
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 43 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 99
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 100 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 156
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 212
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 213 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 269
Query: 322 KDAEAR 327
D R
Sbjct: 270 VDLTKR 275
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 49 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 106 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 162
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 218
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 275
Query: 322 KDAEAR 327
D R
Sbjct: 276 VDLTKR 281
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGLS+ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLSFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 152 DSGQISIALEYMDGGSLAD-ILRMQ---KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
D + I +E +GG L + I+ Q K++ E ++ + K+++ L+Y H +H+VH+D
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS-QHVVHKD 149
Query: 208 IKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+KP N+L P KI DFG+ A L S GT YM+PE + + ++
Sbjct: 150 LKPENILFQ-DTSPHSPIKIIDFGL-AELFKSDEHSTNAAGTALYMAPEVFKRD-VTFKC 206
Query: 264 DIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKD 323
DIWS G+ ++ TG P+ + ++P+ + + +P+ + L KD
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKD 266
Query: 324 AEARPTADQLLSHPFITK 341
E RP+A Q+L H + +
Sbjct: 267 PERRPSAAQVLHHEWFKQ 284
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 35 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 91
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 92 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 148
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 204
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 205 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 261
Query: 322 KDAEAR 327
D R
Sbjct: 262 VDLTKR 267
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 126 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-D 182
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 238
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 295
Query: 322 KDAEAR 327
D R
Sbjct: 296 VDLTKR 301
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKK----INIFEKEKRNQLLTEIRTLCEAPC-NEGLVE 143
+G G VV + + +A+KK ++I +E + Q EI+ + A C +E LVE
Sbjct: 39 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVM--AKCQHENLVE 94
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG----LSYLHG 199
G + D + + YM GSL D L P P+ M K+ QG +++LH
Sbjct: 95 LLG--FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGINFLHE 151
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNE 257
H +HRDIK AN+L++ KI+DFG++ E M + VGT YM+PE +R E
Sbjct: 152 NHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE 210
Query: 258 SYSYPADIWSIGLALFECGTG 278
+ +DI+S G+ L E TG
Sbjct: 211 -ITPKSDIYSFGVVLLEIITG 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 17/245 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
L++RD+KP NLL++ +G ++TDFG + ++ GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWXLXGTPEYLAPEIILSKGYNKA 218
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 323 DAEAR 327
D R
Sbjct: 276 DLTKR 280
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + MD D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 72 VIHTENKLYLVFEFLSMDLKDFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 190 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 250 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + MD D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 129 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+GSGA S V T ++ ALK I + + L EI L + +E +V
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK-HENIVTLEDI 74
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
+ + + ++ + GG L D + + E S + +++L + YLH +VHRD
Sbjct: 75 Y--ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE-NGIVHRD 131
Query: 208 IKPANLLV---NLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPAD 264
+KP NLL + ITDFG+S +N I +T GT Y++PE + + YS D
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKMEQNGIM--STACGTPGYVAPEVLAQKPYSKAVD 189
Query: 265 IWSIGLA--LFECGTGEFPYAASEGPVNLMLQILED--PSPSPSRQNFSPEFCSFVDDCL 320
WSIG+ + CG +P E L +I E SP + S F+ L
Sbjct: 190 CWSIGVITYILLCG---YPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 321 KKDAEARPTADQLLSHPFI 339
+KD R T ++ LSHP+I
Sbjct: 247 EKDPNERYTCEKALSHPWI 265
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKK----INIFEKEKRNQLLTEIRTLCEAPC-NEGLVE 143
+G G VV + + +A+KK ++I +E + Q EI+ + A C +E LVE
Sbjct: 39 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVM--AKCQHENLVE 94
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG----LSYLHG 199
G + D + + YM GSL D L P P+ M K+ QG +++LH
Sbjct: 95 LLG--FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGINFLHE 151
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNE 257
H +HRDIK AN+L++ KI+DFG++ E M VGT YM+PE +R E
Sbjct: 152 NHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE 210
Query: 258 SYSYPADIWSIGLALFECGTG 278
+ +DI+S G+ L E TG
Sbjct: 211 -ITPKSDIYSFGVVLLEIITG 230
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + MD D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 130
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 131 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 19/242 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KD 323
D
Sbjct: 275 VD 276
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D + D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 130
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 126
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + MD D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 73 VIHTENKLYLVFEFLSMDLKDFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 130
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ +++ G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYQMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKK----INIFEKEKRNQLLTEIRTLCEAPC-NEGLVE 143
+G G VV + + +A+KK ++I +E + Q EI+ + A C +E LVE
Sbjct: 33 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVM--AKCQHENLVE 88
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG----LSYLHG 199
G + D + + YM GSL D L P P+ M K+ QG +++LH
Sbjct: 89 LLG--FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGINFLHE 145
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNE 257
H +HRDIK AN+L++ KI+DFG++ E M VGT YM+PE +R E
Sbjct: 146 NHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE 204
Query: 258 SYSYPADIWSIGLALFECGTG 278
+ +DI+S G+ L E TG
Sbjct: 205 -ITPKSDIYSFGVVLLEIITG 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 19/271 (7%)
Query: 76 YRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEK--EKRNQLLTEIRTLC 133
+ + E+ + IGSG+ V + H +A+K + + + E+ E+ L
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 134 EAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQ 192
+ + ++ F G YM ++I ++ +G SL L +Q++ + L + ++ Q
Sbjct: 88 KTR-HVNILLFMG--YMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 193 GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMS 250
G+ YLH ++++HRD+K N+ ++ KI DFG++ + G+V +M+
Sbjct: 144 GMDYLHA-KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 251 PERIR---NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI---LEDPSPSPS 304
PE IR N +S+ +D++S G+ L+E TGE PY+ ++ + P S
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKL 262
Query: 305 RQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
+N V DC+KK E RP Q+LS
Sbjct: 263 YKNCPKAMKRLVADCVKKVKEERPLFPQILS 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 126
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 131/267 (49%), Gaps = 20/267 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-----LLTEIRTLCEAPCNEGLVE 143
+G G +VV++ + T + A K +K +R Q +L EI L A ++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAK---FLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
H + ++ +I + LEY GG + + + + + E + + K++L+G+ YLH
Sbjct: 94 LHEVY--ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ-N 150
Query: 202 HLVHRDIKPANLLVNL---KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES 258
++VH D+KP N+L++ G KI DFG+S + ++ + +GT Y++PE + +
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL-REIMGTPEYLAPEILNYDP 209
Query: 259 YSYPADIWSIGLALFECGTGEFPYAASEGPVNLM--LQILEDPSPSPSRQNFSPEFCSFV 316
+ D+W+IG+ + T P+ + + Q+ D S + + S F+
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS-EETFSSVSQLATDFI 268
Query: 317 DDCLKKDAEARPTADQLLSHPFITKYE 343
L K+ E RPTA+ LSH ++ +++
Sbjct: 269 QSLLVKNPEKRPTAEICLSHSWLQQWD 295
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 18/267 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEI----RTLCEAPCNEGLVE 143
IG G SVV+R ++ T + A+K +++ + L TE ++C + +VE
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLA-DILRMQKS---IPEPILSSMFKKLLQGLSYLHG 199
+ G + + E+MDG L +I++ + E + S +++L+ L Y H
Sbjct: 93 LLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 200 VRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
+++HRD+KP +L+ K K+ FG++ L S + VGT +M+PE ++
Sbjct: 151 -NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 209
Query: 257 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ--NFSPEFCS 314
E Y P D+W G+ LF +G P+ ++ L I++ RQ + S
Sbjct: 210 EPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKD 267
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
V L D R T + L+HP++ +
Sbjct: 268 LVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NL+++ +G ++TDFG + ++ + +C GT Y++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIIISKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 18/267 (6%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEI----RTLCEAPCNEGLVE 143
IG G SVV+R ++ T + A+K +++ + L TE ++C + +VE
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLA-DILRMQKS---IPEPILSSMFKKLLQGLSYLHG 199
+ G + + E+MDG L +I++ + E + S +++L+ L Y H
Sbjct: 91 LLETY--SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 200 VRHLVHRDIKPANLLVNLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
+++HRD+KP +L+ K K+ FG++ L S + VGT +M+PE ++
Sbjct: 149 -NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 257 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ--NFSPEFCS 314
E Y P D+W G+ LF +G P+ ++ L I++ RQ + S
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKD 265
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
V L D R T + L+HP++ +
Sbjct: 266 LVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 126
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 129 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 128
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 188
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 189 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 249 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 190 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 250 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 126
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKDFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 134
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 194
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 195 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 254
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 255 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 130
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 131
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 191
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 192 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 251
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 252 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 134
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDI 194
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 195 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 254
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 255 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 130
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 191 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 251 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 190 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 250 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 14/226 (6%)
Query: 156 ISIALEYMDGGSLA-DILRM-QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
+ + L M+GG L I M Q PE ++ GL LH R +V+RD+KP N+
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENI 317
Query: 214 LVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALF 273
L++ G +I+D G++ + + VGTV YM+PE ++NE Y++ D W++G L+
Sbjct: 318 LLDDHGHIRISDLGLAVHVPEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376
Query: 274 ECGTGEFPYAASEGPVNL-MLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR----- 327
E G+ P+ + + ++ L P + FSP+ S L KD R
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRG 436
Query: 328 PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQR---MKDLADVS 370
+A ++ HP K ++ A + F P + KD+ D+
Sbjct: 437 GSAREVKEHPLFKKLNFKRLG-AGMLEPPFKPDPQAIYCKDVLDIE 481
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 129
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 130 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 190 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 250 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D + D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 126
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 156 ISIALEYMDGGSLA-DILRM-QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
+ + L M+GG L I M Q PE ++ GL LH R +V+RD+KP N+
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENI 317
Query: 214 LVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALF 273
L++ G +I+D G++ + + VGTV YM+PE ++NE Y++ D W++G L+
Sbjct: 318 LLDDHGHIRISDLGLAVHVPEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376
Query: 274 ECGTGEFPYAASEGPVNL-MLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR----- 327
E G+ P+ + + ++ L P + FSP+ S L KD R
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRG 436
Query: 328 PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQR---MKDLADV 369
+A ++ HP K ++ A + F P + KD+ D+
Sbjct: 437 GSAREVKEHPLFKKLNFKRLG-AGMLEPPFKPDPQAIYCKDVLDI 480
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 131
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDI 191
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 192 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 251
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 252 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 138/317 (43%), Gaps = 48/317 (15%)
Query: 73 EKTYRC-ASHEMRIFGAIGSGASSVVQRAVHIPTH-RIIALKKINIFEKEKRNQLLTEIR 130
EK C A + IG GA V +A + R +ALK++ + E+ L+ IR
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIR 60
Query: 131 TLC--------EAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP- 181
+ E P L + ++++ E++D D+ +PEP
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPG 116
Query: 182 ----ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA 237
+ M +LL+GL +LH R +VHRD+KP N+LV G+ K+ DFG++ +A
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL- 296
+ + V T+ Y +PE + SY+ P D+WS+G E + P V+ + +IL
Sbjct: 176 LTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-PLFRGSSDVDQLGKILD 233
Query: 297 ------EDPSP---SPSRQNFSP-------EFCSFVDD--------CLKKDAEARPTADQ 332
E+ P + RQ F +F + +D+ CL + R +A
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 293
Query: 333 LLSHPFITKYEHAKVDL 349
LSHP+ E K +L
Sbjct: 294 ALSHPYFQDLERCKENL 310
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)
Query: 124 QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADI----LRMQKS-- 177
Q++T+I+ C EG++ + ++ I EYM+ S+ + K+
Sbjct: 95 QIITDIKNEYCLTC-EGII--------TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 178 --IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
IP ++ + K +L SY+H +++ HRD+KP+N+L++ GR K++DFG S + +
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 236 IAMCATFVGTVTYMSPERIRNESYSY---PADIWSIGLALFECGTGEFPYAASEGPVNLM 292
+ GT +M PE NES SY DIWS+G+ L+ P++ V L
Sbjct: 206 KIKGSR--GTYEFMPPEFFSNES-SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262
Query: 293 LQI-----------------LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
I L + + S S E F+ L+K+ R T++ L
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322
Query: 336 HPFITKYEHAKVDLAAFVRSVFDPMQRM 363
H ++ + DL F + ++ +++
Sbjct: 323 HEWLA--DTNIEDLREFSKELYKKRKKL 348
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 75 TYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLC 133
T C EM+ +G+G V R +H T +A+K+ + R + EI+ +
Sbjct: 10 TQTCGPWEMK--ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM- 66
Query: 134 EAPCNEGLVEFHGAFYMPDSGQIS-------IALEYMDGGSLADILRMQKS---IPEPIL 183
N V A +PD Q +A+EY +GG L L ++ + E +
Sbjct: 67 -KKLNHPNVV--SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 184 SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP-----KITDFGISAGLENSIAM 238
++ + L YLH R ++HRD+KP N++ L+ P KI D G + L+ +
Sbjct: 124 RTLLSDISSALRYLHENR-IIHRDLKPENIV--LQPGPQRLIHKIIDLGYAKELDQG-EL 179
Query: 239 CATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVN 290
C FVGT+ Y++PE + + Y+ D WS G FEC TG P+ + PV
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 75 TYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLC 133
T C EM+ +G+G V R +H T +A+K+ + R + EI+ +
Sbjct: 11 TQTCGPWEMK--ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM- 67
Query: 134 EAPCNEGLVEFHGAFYMPDSGQIS-------IALEYMDGGSLADILRMQKS---IPEPIL 183
N V A +PD Q +A+EY +GG L L ++ + E +
Sbjct: 68 -KKLNHPNVV--SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 124
Query: 184 SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP-----KITDFGISAGLENSIAM 238
++ + L YLH R ++HRD+KP N++ L+ P KI D G + L+ +
Sbjct: 125 RTLLSDISSALRYLHENR-IIHRDLKPENIV--LQPGPQRLIHKIIDLGYAKELDQG-EL 180
Query: 239 CATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVN 290
C FVGT+ Y++PE + + Y+ D WS G FEC TG P+ + PV
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T R +A+K I +K + N +L E+R + P
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E S F++++ + Y
Sbjct: 72 NIVKLFEV-----IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 126
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H R +VHRD+K NLL++ KI DFG S TF G+ Y +PE +
Sbjct: 127 CHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDTFCGSPPYAAPELFQG 184
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 185 KKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT Y++P I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPAIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 136/314 (43%), Gaps = 48/314 (15%)
Query: 73 EKTYRC-ASHEMRIFGAIGSGASSVVQRAVHIPTH-RIIALKKINIFEKEKRNQLLTEIR 130
EK C A + IG GA V +A + R +ALK++ + E+ L+ IR
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIR 60
Query: 131 TLC--------EAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP- 181
+ E P L + ++++ E++D D+ +PEP
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPG 116
Query: 182 ----ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA 237
+ M +LL+GL +LH R +VHRD+KP N+LV G+ K+ DFG++ +A
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL- 296
+ + V T+ Y +PE + SY+ P D+WS+G E + P V+ + +IL
Sbjct: 176 LTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-PLFRGSSDVDQLGKILD 233
Query: 297 ------EDPSP---SPSRQNFSP-------EFCSFVDD--------CLKKDAEARPTADQ 332
E+ P + RQ F +F + +D+ CL + R +A
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 293
Query: 333 LLSHPFITKYEHAK 346
LSHP+ E K
Sbjct: 294 ALSHPYFQDLERCK 307
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 42/284 (14%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++ALKKI + + E T IR +L + + +V+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKS-----IPEPILSSMFKKLLQGLSYLHGVR 201
+ ++ + E++D D+ + + IP P++ S +LLQGL++ H R
Sbjct: 73 VIHT--ENKLYLVFEHVD----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYS 260
++HRD+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------P 301
DIWS+G E T FP + + + + L P P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 302 SPSRQNFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+RQ+FS + S + L D R +A L+HPF
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 121/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++AL KI + + E T IR +L + + +V+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 127
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 188 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 248 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 121/279 (43%), Gaps = 32/279 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + T ++AL KI + + E T IR +L + + +V+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ + + + D D + IP P++ S +LLQGL++ H R ++HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHR-VLHR 126
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESYSYPADI 265
D+KP NLL+N +G K+ DFG++ + V T+ Y +PE + + YS DI
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 266 WSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS-----------------PSPSRQ 306
WS+G E T FP + + + + L P P +RQ
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 307 NFSP-------EFCSFVDDCLKKDAEARPTADQLLSHPF 338
+FS + S + L D R +A L+HPF
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 19/246 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-----LV 142
+G+G+ V H + A+K I +K+K +L TL E + LV
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ +F D+ + + +EY+ GG + LR EP +++ YLH +
Sbjct: 105 KLEFSF--KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-D 161
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSY 261
L++RD+KP NLL++ +G ++TDFG + ++ + +C GT ++PE I ++ Y+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEALAPEIILSKGYNK 217
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
D W++G+ ++E G P+ A + P+ + +I+ PS +FS + + + L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ 274
Query: 322 KDAEAR 327
D R
Sbjct: 275 VDLTKR 280
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 15/295 (5%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+R+ G G + + + + LKK I + + +TE R L A + L
Sbjct: 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ F PD ++ +E+++GG L ++ + E +++ L +LH +
Sbjct: 88 QLFCCFQTPD--RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD-KG 144
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGI-SAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
+++RD+K N+L++ +G K+ DFG+ G+ N + ATF GT Y++PE ++ Y
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT-TATFCGTPDYIAPEILQEMLYGP 203
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPS--RQNFSPEFCSFV--D 317
D W++G+ L+E G P+ A E +L IL D P+ ++ + SF+ +
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEA-ENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKN 262
Query: 318 DCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQ-RMKDLADVST 371
++ + + +L HPF + + A+++ R + P + R+K DVS
Sbjct: 263 PTMRLGSLTQGGEHAILRHPFFKEIDWAQLNH----RQIEPPFRPRIKSREDVSN 313
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 30/234 (12%)
Query: 118 EKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKS 177
E E+ +L EIR + ++ H F + + + LE + GG L D L ++S
Sbjct: 54 EIEREVNILREIR-------HPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKES 104
Query: 178 IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLE 233
+ E + K++L G+ YLH R + H D+KP N+++ K P K+ DFGI+ +E
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
Query: 234 NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLML 293
F GT +++PE + E AD+WSIG+ + +G P+ L
Sbjct: 164 AGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL-- 220
Query: 294 QILEDPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARPTADQLLSHPFI 339
+ S +F E+ S F+ L KD + R T Q L H +I
Sbjct: 221 -----TNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 76
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 77 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 132
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFV 316
S+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 251
Query: 317 DDCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 252 AECLKKKRDERPLFPQILA 270
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
+G G V + T +A K I + + ++ EI + + + L++ + AF
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HANLIQLYDAF 155
Query: 149 YMPDSGQISIALEYMDGGSLAD-ILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
I + +EY+DGG L D I+ ++ E K++ +G+ ++H + +++H D
Sbjct: 156 --ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM-YILHLD 212
Query: 208 IKPANLL-VNLKGRP-KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
+KP N+L VN + KI DFG++ + + F GT +++PE + + S+P D+
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSFPTDM 271
Query: 266 WSIGLALFECGTGEFPYAASEGP--VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKD 323
WS+G+ + +G P+ +N +L D Q+ S E F+ L K+
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE-DEEFQDISEEAKEFISKLLIKE 330
Query: 324 AEARPTADQLLSHPFITKYE-HAKV 347
R +A + L HP+++ ++ H+++
Sbjct: 331 KSWRISASEALKHPWLSDHKLHSRL 355
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T R +A+K I +K + N +L E+R + P
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E S F++++ + Y
Sbjct: 75 NIVKLFEV-----IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 129
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H R +VHRD+K NLL++ KI DFG S + A F G Y +PE +
Sbjct: 130 CHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA-FCGAPPYAAPELFQG 187
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 73
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 74 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 129
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFV 316
S+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 248
Query: 317 DDCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 249 AECLKKKRDERPLFPQILA 267
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 76
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 77 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 132
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFV 316
S+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 251
Query: 317 DDCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 252 AECLKKKRDERPLFPQILA 270
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 31/300 (10%)
Query: 67 DESDHSEKTYRCASHEMRIFG---AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN 123
D+ S C S + RI+ IGSG SS V + ++ +I A+K +N+ +E N
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADN 95
Query: 124 QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIP 179
Q L R E L + +I+ YM + G+ L L+ +KSI
Sbjct: 96 QTLDSYRN--EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSID 153
Query: 180 EPILSSMFKKLLQGLSYLHGVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLE--NSI 236
S +K +L+ + +H +H +VH D+KPAN L+ + G K+ DFGI+ ++ +
Sbjct: 154 PWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTS 210
Query: 237 AMCATFVGTVTYMSPERIRNESYS-----------YPADIWSIGLALFECGTGEFPYAAS 285
+ + VGTV YM PE I++ S S +D+WS+G L+ G+ P+
Sbjct: 211 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
Query: 286 EGPVNLMLQILEDPSPSPSRQNF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
++ + I+ DP+ + + + CLK+D + R + +LL+HP++ H
Sbjct: 271 INQISKLHAII-DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 98
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 99 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 154
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFV 316
S+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 273
Query: 317 DDCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 274 AECLKKKRDERPLFPQILA 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 99
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 100 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 155
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFV 316
S+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 274
Query: 317 DDCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 275 AECLKKKRDERPLFPQILA 293
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 72 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 127
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFV 316
S+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 246
Query: 317 DDCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 247 AECLKKKRDERPLFPQILA 265
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 72 YSTAP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 127
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFV 316
S+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 246
Query: 317 DDCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 247 AECLKKKRDERPLFPQILA 265
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 31/300 (10%)
Query: 67 DESDHSEKTYRCASHEMRIFG---AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN 123
D+ S C S + RI+ IGSG SS V + ++ +I A+K +N+ +E N
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADN 95
Query: 124 QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIP 179
Q L R E L + +I+ YM + G+ L L+ +KSI
Sbjct: 96 QTLDSYRN--EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSID 153
Query: 180 EPILSSMFKKLLQGLSYLHGVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLE--NSI 236
S +K +L+ + +H +H +VH D+KPAN L+ + G K+ DFGI+ ++ +
Sbjct: 154 PWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTS 210
Query: 237 AMCATFVGTVTYMSPERIRNESYS-----------YPADIWSIGLALFECGTGEFPYAAS 285
+ + VGTV YM PE I++ S S +D+WS+G L+ G+ P+
Sbjct: 211 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
Query: 286 EGPVNLMLQILEDPSPSPSRQNF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
++ + I+ DP+ + + + CLK+D + R + +LL+HP++ H
Sbjct: 271 INQISKLHAII-DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 73 EKTYRC-ASHEMRIFGAIGSGASSVVQRAVHIPTH-RIIALKKINIFEKEKRNQLLTEIR 130
EK C A + IG GA V +A + R +ALK++ + E+ L+ IR
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIR 60
Query: 131 TLC--------EAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP- 181
+ E P L + ++++ E++D D+ +PEP
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPG 116
Query: 182 ----ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA 237
+ M +LL+GL +LH R +VHRD+KP N+LV G+ K+ DFG++ +A
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ + V T+ Y +PE + SY+ P D+WS+G E
Sbjct: 176 LTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDG 165
+ + K + +K + LL E++ L + P L EF D G + E G
Sbjct: 79 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYTG 133
Query: 166 GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP---K 222
G L D + +K E + + +++L G++Y+H + +VHRD+KP NLL+ K + +
Sbjct: 134 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 192
Query: 223 ITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPY 282
I DFG+S E S M +GT Y++PE + + +Y D+WS G+ L+ +G P+
Sbjct: 193 IIDFGLSTHFEASKKMKDK-IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 250
Query: 283 -AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
A+E + ++ + P + S + L R +A L H +I
Sbjct: 251 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
Query: 342 Y--EHAKVDLAAFVRSVFDPMQ 361
Y E VD+ + ++ + Q
Sbjct: 311 YTKEQISVDVPSLDNAILNIRQ 332
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDG 165
+ + K + +K + LL E++ L + P L EF D G + E G
Sbjct: 80 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYTG 134
Query: 166 GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP---K 222
G L D + +K E + + +++L G++Y+H + +VHRD+KP NLL+ K + +
Sbjct: 135 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 193
Query: 223 ITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPY 282
I DFG+S E S M +GT Y++PE + + +Y D+WS G+ L+ +G P+
Sbjct: 194 IIDFGLSTHFEASKKMKDK-IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 251
Query: 283 -AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
A+E + ++ + P + S + L R +A L H +I
Sbjct: 252 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
Query: 342 Y--EHAKVDLAAFVRSVFDPMQ 361
Y E VD+ + ++ + Q
Sbjct: 312 YTKEQISVDVPSLDNAILNIRQ 333
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV-HRDIKPANLL 214
I + +EY+ GG L D + + E +F+++L G+ Y H RH+V HRD+KP N+L
Sbjct: 91 IFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH--RHMVVHRDLKPENVL 148
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP-ADIWSIGLALF 273
++ KI DFG+S + + + + G+ Y +PE I Y+ P DIWS G+ L+
Sbjct: 149 LDAHMNAKIADFGLSNMMSDGEFLRXS-CGSPNYAAPEVISGRLYAGPEVDIWSSGVILY 207
Query: 274 ECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQL 333
G P+ P L +I + +P Q +P S + L+ D R T +
Sbjct: 208 ALLCGTLPFDDDHVP-TLFKKICDGIFYTP--QYLNPSVISLLKHMLQVDPMKRATIKDI 264
Query: 334 LSHPFITK 341
H + +
Sbjct: 265 REHEWFKQ 272
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 99
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 100 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 155
Query: 206 RDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERIRNES---YS 260
RD+K N+ ++ KI DFG++ + G++ +M+PE IR + YS
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 261 YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFVD 317
+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 275
Query: 318 DCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 276 ECLKKKRDERPLFPQILA 293
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDG 165
+ + K + +K + LL E++ L + P L EF D G + E G
Sbjct: 56 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYTG 110
Query: 166 GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP---K 222
G L D + +K E + + +++L G++Y+H + +VHRD+KP NLL+ K + +
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 169
Query: 223 ITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPY 282
I DFG+S E S M +GT Y++PE + + +Y D+WS G+ L+ +G P+
Sbjct: 170 IIDFGLSTHFEASKKMKDK-IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 227
Query: 283 -AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
A+E + ++ + P + S + L R +A L H +I
Sbjct: 228 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287
Query: 342 Y--EHAKVDLAAFVRSVFDPMQ 361
Y E VD+ + ++ + Q
Sbjct: 288 YTKEQISVDVPSLDNAILNIRQ 309
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 75
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L ++ E L + ++ +G+ YLH + ++H
Sbjct: 76 YSTKP---QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA-KSIIH 131
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF---VGTVTYMSPERIRNES---Y 259
RD+K N+ ++ KI DFG+ A +++ + F G++ +M+PE IR + Y
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGL-ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE-------DPSPSPSRQNFSPEF 312
S+ +D+++ G+ L+E TG+ PY+ +N QI+E P S R N
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 313 CSFVDDCLKKDAEARPTADQLLS 335
+ +CLKK + RP+ ++L+
Sbjct: 247 KRLMAECLKKKRDERPSFPRILA 269
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 91
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 92 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 147
Query: 206 RDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERIRNES---YS 260
RD+K N+ ++ KI DFG++ + G++ +M+PE IR + YS
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 261 YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFVD 317
+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 208 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 267
Query: 318 DCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 268 ECLKKKRDERPLFPQILA 285
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T + +A+K I +K + N +L E+R + P
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E + F++++ + Y
Sbjct: 74 NIVKLFEV-----IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H + +VHRD+K NLL++ KI DFG S + TF G+ Y +PE +
Sbjct: 129 CHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQG 186
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T + +A+K I +K + N +L E+R + P
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E + F++++ + Y
Sbjct: 74 NIVKLFEV-----IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H + +VHRD+K NLL++ KI DFG S + TF G+ Y +PE +
Sbjct: 129 CHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQG 186
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPCN 138
+ ++ +G G+ + V RA I T +A+K I+ +++ ++ E++ C+ +
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-H 70
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYL 197
++E + Y DS + + LE G + L+ + K E +++ G+ YL
Sbjct: 71 PSILELYN--YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
H ++HRD+ +NLL+ KI DFG++ L+ T GT Y+SPE
Sbjct: 129 HS-HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 258 SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
++ +D+WS+G + G P+ L +L D PS S E +
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD-YEMPSF--LSIEAKDLIH 244
Query: 318 DCLKKDAEARPTADQLLSHPFITK 341
L+++ R + +L HPF+++
Sbjct: 245 QLLRRNPADRLSLSSVLDHPFMSR 268
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 31/289 (10%)
Query: 78 CASHEMRIFG---AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCE 134
C S + RI+ IGSG SS V + ++ +I A+K +N+ +E NQ L R E
Sbjct: 3 CISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADNQTLDSYRN--E 57
Query: 135 APCNEGLVEFHGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIPEPILSSMFKKL 190
L + +I+ YM + G+ L L+ +KSI S +K +
Sbjct: 58 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM 117
Query: 191 LQGLSYLHGVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVT 247
L+ + +H +H +VH D+KPAN L+ + G K+ DFGI+ ++ + + + VGTV
Sbjct: 118 LEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174
Query: 248 YMSPERIRNESYS-----------YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL 296
YM PE I++ S S +D+WS+G L+ G+ P+ ++ + I+
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234
Query: 297 EDPSPSPSRQNF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
DP+ + + + CLK+D + R + +LL+HP++ H
Sbjct: 235 -DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 282
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 42/275 (15%)
Query: 89 IGSGASSVVQR-----------AVHIPTHRIIALKK-INIFEKEKRNQLLTEIRTLCEAP 136
+GSG ++V++ A I R+ + ++ ++ E E+ +L EIR
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR------ 87
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
+ ++ H F + + + LE + GG L D L ++S+ E + K++L G+ Y
Sbjct: 88 -HPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPE 252
LH R + H D+KP N+++ K P K+ DFGI+ +E F GT +++PE
Sbjct: 145 LHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTPEFVAPE 202
Query: 253 RIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEF 312
+ E AD+WSIG+ + +G P+ L + S +F E+
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL-------TNISAVNYDFDEEY 255
Query: 313 CS--------FVDDCLKKDAEARPTADQLLSHPFI 339
S F+ L KD + R Q L H +I
Sbjct: 256 FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 71
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L + ++ E I L + ++ QG+ YLH + ++H
Sbjct: 72 YSTKP---QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA-KSIIH 127
Query: 206 RDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERIRNES---YS 260
RD+K N+ ++ KI DFG++ + G++ +M+PE IR + YS
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 261 YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---DPSPSPSRQNFSPEFCSFVD 317
+ +D+++ G+ L+E TG+ PY+ ++ + P S R N +
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 247
Query: 318 DCLKKDAEARPTADQLLS 335
+CLKK + RP Q+L+
Sbjct: 248 ECLKKKRDERPLFPQILA 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A H+ T R +A+K I +K + N +L E+R + P
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVAVK---IIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E + F++++ + Y
Sbjct: 75 NIVKLFEV-----IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H +++VHRD+K NLL++ KI DFG S + TF G+ Y +PE +
Sbjct: 130 CHQ-KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL-DTFCGSPPYAAPELFQG 187
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 21/258 (8%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRII--ALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLV 142
FG + SG + +P+ + I A+K + + + +++R L E + + + ++
Sbjct: 29 FGEVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNII 80
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVR 201
G + S + I EYM+ GSL LR + I L M + + G+ YL +
Sbjct: 81 RLEGV--VTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRNES 258
+ VHRD+ N+L+N K++DFG+S LE+ T G + + SPE I
Sbjct: 139 Y-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 259 YSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
++ +D+WS G+ L+E + GE PY E +++ +++ P + +
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLML 255
Query: 318 DCLKKDAEARPTADQLLS 335
DC +KD RP +Q++S
Sbjct: 256 DCWQKDRNNRPKFEQIVS 273
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 31/289 (10%)
Query: 78 CASHEMRIFG---AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCE 134
C S + RI+ IGSG SS V + ++ +I A+K +N+ +E NQ L R E
Sbjct: 2 CISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADNQTLDSYRN--E 56
Query: 135 APCNEGLVEFHGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIPEPILSSMFKKL 190
L + +I+ YM + G+ L L+ +KSI S +K +
Sbjct: 57 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM 116
Query: 191 LQGLSYLHGVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVT 247
L+ + +H +H +VH D+KPAN L+ + G K+ DFGI+ ++ + + + VGTV
Sbjct: 117 LEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 173
Query: 248 YMSPERIRNESYS-----------YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL 296
YM PE I++ S S +D+WS+G L+ G+ P+ ++ + I+
Sbjct: 174 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 233
Query: 297 EDPSPSPSRQNF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
DP+ + + + CLK+D + R + +LL+HP++ H
Sbjct: 234 -DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 281
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 77 RCASHEMRIFG---AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLC 133
C S + RI+ IGSG SS V + ++ +I A+K +N+ +E NQ L R
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADNQTLDSYRN-- 59
Query: 134 EAPCNEGLVEFHGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIPEPILSSMFKK 189
E L + +I+ YM + G+ L L+ +KSI S +K
Sbjct: 60 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 119
Query: 190 LLQGLSYLHGVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTV 246
+L+ + +H +H +VH D+KPAN L+ + G K+ DFGI+ ++ + + + VGTV
Sbjct: 120 MLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 247 TYMSPERIRNESYS-----------YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
YM PE I++ S S +D+WS+G L+ G+ P+ ++ + I
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 296 LEDPSPSPSRQNF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
+ DP+ + + + CLK+D + R + +LL+HP++ H
Sbjct: 237 I-DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 285
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + A FV T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 130
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 189
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 190 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 249
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 250 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 300
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 30/234 (12%)
Query: 118 EKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKS 177
E E+ +L EIR + ++ H F + + + LE + GG L D L ++S
Sbjct: 61 EIEREVNILREIR-------HPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKES 111
Query: 178 IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP----KITDFGISAGLE 233
+ E + K++L G+ YLH R + H D+KP N+++ K P K+ DFGI+ +E
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 234 NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLML 293
F GT +++PE + E AD+WSIG+ + +G P+ L
Sbjct: 171 AGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL-- 227
Query: 294 QILEDPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARPTADQLLSHPFI 339
+ S +F E+ S F+ L KD + R Q L H +I
Sbjct: 228 -----TNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE M+ L D + + ++ E + S F ++L+ + + H
Sbjct: 76 IRLLDWFERPDS--FVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 134 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 190
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 241
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 242 CLALRPSDRPTFEEIQNHPWM 262
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + A FV T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T + +A+K I +K + N +L E+R + P
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E + F++++ + Y
Sbjct: 67 NIVKLFEV-----IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H + +VHRD+K NLL++ KI DFG S + TF G+ Y +PE +
Sbjct: 122 CHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQG 179
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 142
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + A FV T Y +PE + N Y+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFVATRWYRAPEIMLNWMHYNQT 199
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 259
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 120
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 121 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 179
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 180 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 239
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 240 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 290
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 27/262 (10%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 87
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L ++ E L + ++ +G+ YLH + ++H
Sbjct: 88 YSTKP---QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA-KSIIH 143
Query: 206 RDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERIRNES---YS 260
RD+K N+ ++ KI DFG++ + G++ +M+PE IR + YS
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 261 YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE-------DPSPSPSRQNFSPEFC 313
+ +D+++ G+ L+E TG+ PY+ +N QI+E P S R N
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 314 SFVDDCLKKDAEARPTADQLLS 335
+ +CLKK + RP+ ++L+
Sbjct: 260 RLMAECLKKKRDERPSFPRILA 281
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
I AIG G+ V T ++ A+K +N + +RN++ + L E
Sbjct: 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV 78
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
+ + D + + ++ + GG L L+ E + +L+ L YL R ++
Sbjct: 79 NLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR-II 137
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI---RNESYSY 261
HRD+KP N+L++ G ITDF I+A L + T GT YM+PE + YS+
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI-TTMAGTKPYMAPEMFSSRKGAGYSF 196
Query: 262 PADIWSIGLALFECGTGEFPY 282
D WS+G+ +E G PY
Sbjct: 197 AVDWWSLGVTAYELLRGRRPY 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 66/312 (21%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKI----NIFEKEKRNQLLTEIRTLCEAPC 137
E I IG+GA VV A T + +A+KKI ++ KR L E++ L
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT--LRELKILKHFK- 111
Query: 138 NEGLVEF---------HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
++ ++ +G F + + L+ M+ L I+ + + +
Sbjct: 112 HDNIIAIKDILRPTVPYGEF-----KSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLY 165
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA----MCATFVG 244
+LL+GL Y+H + ++HRD+KP+NLLVN KI DFG++ GL S A +V
Sbjct: 166 QLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 245 TVTYMSPERIRN-ESYSYPADIWSIGLALFECGTGE-------FPYAASEGPVNLMLQIL 296
T Y +PE + + Y+ D+WS+G C GE FP + L++ +L
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVG-----CIFGEMLARRQLFPGKNYVHQLQLIMMVL 279
Query: 297 EDPSPS-----------------PSRQNFSPEFC---------SFVDDCLKKDAEARPTA 330
PSP+ P RQ E S + L+ + AR +A
Sbjct: 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA 339
Query: 331 DQLLSHPFITKY 342
L HPF+ KY
Sbjct: 340 AAALRHPFLAKY 351
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 19/231 (8%)
Query: 156 ISIALEYMDGGSLA-DILRMQKSIP---EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPA 211
+ + + M+GG + I + + P EP +++ GL +LH R++++RD+KP
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPE 318
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+L++ G +I+D G++ L+ + GT +M+PE + E Y + D +++G+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 272 LFECGTGEFPYAASEGPV---NLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR- 327
L+E P+ A V L ++LE P + FSP F + L+KD E R
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRL 436
Query: 328 ----PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRM---KDLADVST 371
+ D L +HP +++ A + F P R K++ DV
Sbjct: 437 GFRDGSCDGLRTHPLFRDISWRQLE-AGMLTPPFVPDSRTVYAKNIQDVGA 486
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 19/231 (8%)
Query: 156 ISIALEYMDGGSLA-DILRMQKSIP---EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPA 211
+ + + M+GG + I + + P EP +++ GL +LH R++++RD+KP
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPE 318
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+L++ G +I+D G++ L+ + GT +M+PE + E Y + D +++G+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 272 LFECGTGEFPYAASEGPV---NLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR- 327
L+E P+ A V L ++LE P + FSP F + L+KD E R
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRL 436
Query: 328 ----PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRM---KDLADVST 371
+ D L +HP +++ A + F P R K++ DV
Sbjct: 437 GFRDGSCDGLRTHPLFRDISWRQLE-AGMLTPPFVPDSRTVYAKNIQDVGA 486
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM-GFVHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 35/283 (12%)
Query: 77 RCASHEMR---IFGAIGSGASSVVQRAVHIPTHRIIALKKI-NIFEKEKRNQ-LLTEIRT 131
R H +R + +G GA +V +++ T ++A+KKI + F+ Q EI
Sbjct: 2 RVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMI 61
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSS-MFKKL 190
L E +E +V + + + +YM+ A I + +I EP+ + +L
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI---RANILEPVHKQYVVYQL 118
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN----------SIA--- 237
++ + YLH L+HRD+KP+N+L+N + K+ DFG+S N SI
Sbjct: 119 IKVIKYLHS-GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 238 --------MCATFVGTVTYMSPERIRNES-YSYPADIWSIGLALFE--CGTGEFPYAASE 286
+ +V T Y +PE + + Y+ D+WS+G L E CG FP +++
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237
Query: 287 GPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
+ ++ +++ PS SP F + + LK+ E R +
Sbjct: 238 NQLERIIGVIDFPSNEDVESIQSP-FAKTMIESLKEKVEIRQS 279
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 19/231 (8%)
Query: 156 ISIALEYMDGGSLA-DILRMQKSIP---EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPA 211
+ + + M+GG + I + + P EP +++ GL +LH R++++RD+KP
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPE 318
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+L++ G +I+D G++ L+ + GT +M+PE + E Y + D +++G+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 272 LFECGTGEFPYAASEGPV---NLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR- 327
L+E P+ A V L ++LE P + FSP F + L+KD E R
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRL 436
Query: 328 ----PTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRM---KDLADVST 371
+ D L +HP +++ A + F P R K++ DV
Sbjct: 437 GFRDGSCDGLRTHPLFRDISWRQLE-AGMLTPPFVPDSRTVYAKNIQDVGA 486
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T + +A++ I +K + N +L E+R + P
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVR---IIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E + F++++ + Y
Sbjct: 74 NIVKLFEV-----IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H + +VHRD+K NLL++ KI DFG S + TF G+ Y +PE +
Sbjct: 129 CHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTFCGSPPYAAPELFQG 186
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 28/279 (10%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
I IGSG SS V + ++ +I A+K +N+ +E NQ L R E L +
Sbjct: 32 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADNQTLDSYRN--EIAYLNKLQQH 86
Query: 145 HGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+I+ YM + G+ L L+ +KSI S +K +L+ + +H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH-- 144
Query: 201 RH-LVHRDIKPANLLVNLKGRPKITDFGISAGLE--NSIAMCATFVGTVTYMSPERIRNE 257
+H +VH D+KPAN L+ + G K+ DFGI+ ++ + + + VGTV YM PE I++
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 258 SYS-----------YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ 306
S S +D+WS+G L+ G+ P+ ++ + I+ DP+
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-DPNHEIEFP 262
Query: 307 NF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
+ + + CLK+D + R + +LL+HP++ H
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 27/262 (10%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIF--EKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG+ V + H +A+K +N+ ++ E+ L + + ++ F G
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMG 87
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVH 205
P Q++I ++ +G SL L ++ E L + ++ +G+ YLH + ++H
Sbjct: 88 YSTAP---QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA-KSIIH 143
Query: 206 RDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERIRNES---YS 260
RD+K N+ ++ KI DFG++ + G++ +M+PE IR + YS
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 261 YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE-------DPSPSPSRQNFSPEFC 313
+ +D+++ G+ L+E TG+ PY+ +N QI+E P S R N
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 314 SFVDDCLKKDAEARPTADQLLS 335
+ +CLKK + RP+ ++L+
Sbjct: 260 RLMAECLKKKRDERPSFPRILA 281
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 140
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 199 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 330 ADQLLS 335
D L S
Sbjct: 257 FDYLRS 262
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 141
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 199
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 200 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 257
Query: 330 ADQLLS 335
D L S
Sbjct: 258 FDYLRS 263
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T + +A+K I +K + N +L E+R + P
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E + F++++ + Y
Sbjct: 74 NIVKLFEV-----IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H + +VHRD+K NLL++ KI DFG S + A F G Y +PE +
Sbjct: 129 CHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA-FCGAPPYAAPELFQG 186
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 156 ISIALEYMDGGSLA-DILRMQKSIP---EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPA 211
+ + + M+GG + I + + P EP +++ GL +LH R++++RD+KP
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPE 318
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+L++ G +I+D G++ L+ + GT +M+PE + E Y + D +++G+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 272 LFECGTGEFPYAASEGPV---NLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR- 327
L+E P+ A V L ++LE P + FSP F + L+KD E R
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRL 436
Query: 328 ----PTADQLLSHPFI 339
+ D L +HP
Sbjct: 437 GFRDGSCDGLRTHPLF 452
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 140/300 (46%), Gaps = 31/300 (10%)
Query: 67 DESDHSEKTYRCASHEMRIFG---AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN 123
D+ S C S + RI+ IGSG SS V + ++ +I A+K +N+ +E N
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADN 95
Query: 124 QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIP 179
Q L R E L + +I+ YM + G+ L L+ +KSI
Sbjct: 96 QTLDSYRN--EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSID 153
Query: 180 EPILSSMFKKLLQGLSYLHGVRH-LVHRDIKPANLLVNLKGRPKITDFGISAGLE--NSI 236
S +K +L+ + +H +H +VH D+KPAN L+ + G K+ DFGI+ ++ +
Sbjct: 154 PWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTS 210
Query: 237 AMCATFVGTVTYMSPERIRNESYS-----------YPADIWSIGLALFECGTGEFPYAAS 285
+ + VG V YM PE I++ S S +D+WS+G L+ G+ P+
Sbjct: 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
Query: 286 EGPVNLMLQILEDPSPSPSRQNF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
++ + I+ DP+ + + + CLK+D + R + +LL+HP++ H
Sbjct: 271 INQISKLHAII-DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 140
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 199 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 330 ADQLLS 335
D L S
Sbjct: 257 FDYLRS 262
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 142
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 200
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 201 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 258
Query: 330 ADQLLS 335
D L S
Sbjct: 259 FDYLRS 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 135
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 136 LVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 193
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 194 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 251
Query: 330 ADQLLS 335
D L S
Sbjct: 252 FDYLRS 257
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 140 GLVEFHGAFYMPDSGQISIAL--EYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+V F+ ++ G+ I L E G+L L+ K +L S +++L+GL +L
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 198 HG-VRHLVHRDIKPANLLVN-LKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR 255
H ++HRD+K N+ + G KI D G++ S A +GT + +PE
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV--IGTPEFXAPEXY- 202
Query: 256 NESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSF 315
E Y D+++ G E T E+PY+ + + ++ P+ + PE
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
Query: 316 VDDCLKKDAEARPTADQLLSHPF 338
++ C++++ + R + LL+H F
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAF 285
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 140
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 199 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 330 ADQLLS 335
D L S
Sbjct: 257 FDYLRS 262
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 28/279 (10%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
I IGSG SS V + ++ +I A+K +N+ +E NQ L R E L +
Sbjct: 32 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNL--EEADNQTLDSYRN--EIAYLNKLQQH 86
Query: 145 HGAFYMPDSGQISIALEYM--DGGS--LADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+I+ YM + G+ L L+ +KSI S +K +L+ + +H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH-- 144
Query: 201 RH-LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA--TFVGTVTYMSPERIRNE 257
+H +VH D+KPAN L+ + G K+ DFGI+ ++ + VGTV YM PE I++
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 258 SYS-----------YPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ 306
S S +D+WS+G L+ G+ P+ ++ + I+ DP+
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-DPNHEIEFP 262
Query: 307 NF-SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEH 344
+ + + CLK+D + R + +LL+HP++ H
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 140
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 199 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 330 ADQLLS 335
D L S
Sbjct: 257 FDYLRS 262
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 148
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 149 LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 206
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 207 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 264
Query: 330 ADQLLS 335
D L S
Sbjct: 265 FDYLRS 270
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G++ LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 149
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 150 LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 207
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 208 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 265
Query: 330 ADQLLS 335
D L S
Sbjct: 266 FDYLRS 271
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 146
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 205 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
Query: 330 ADQLLS 335
D L S
Sbjct: 263 FDYLRS 268
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 146 LVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 204 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 261
Query: 330 ADQLLS 335
D L S
Sbjct: 262 FDYLRS 267
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 66/312 (21%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKI----NIFEKEKRNQLLTEIRTLCEAPC 137
E I IG+GA VV A T + +A+KKI ++ KR L E++ L
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT--LRELKILKHFK- 112
Query: 138 NEGLVEF---------HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
++ ++ +G F + + L+ M+ L I+ + + +
Sbjct: 113 HDNIIAIKDILRPTVPYGEF-----KSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLY 166
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA----MCATFVG 244
+LL+GL Y+H + ++HRD+KP+NLLVN KI DFG++ GL S A +V
Sbjct: 167 QLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 245 TVTYMSPERIRN-ESYSYPADIWSIGLALFECGTGE-------FPYAASEGPVNLMLQIL 296
T Y +PE + + Y+ D+WS+G C GE FP + L++ +L
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVG-----CIFGEMLARRQLFPGKNYVHQLQLIMMVL 280
Query: 297 EDPSPS-----------------PSRQNFSPEFC---------SFVDDCLKKDAEARPTA 330
PSP+ P RQ E S + L+ + AR +A
Sbjct: 281 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA 340
Query: 331 DQLLSHPFITKY 342
L HPF+ KY
Sbjct: 341 AAALRHPFLAKY 352
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 146
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 205 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
Query: 330 ADQLLS 335
D L S
Sbjct: 263 FDYLRS 268
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN------IFEKEKRNQLLT 127
KTY +H +GSGA V A+ + +A+KK++ IF K +LL
Sbjct: 42 KTYVSPTH-------VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 94
Query: 128 EIRTLCEAPCNEGLVE-FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSM 186
E GL++ F A + + + + +M L I+ M+ S E + +
Sbjct: 95 LKHMQHENVI--GLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFS--EEKIQYL 149
Query: 187 FKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV 246
++L+GL Y+H +VHRD+KP NL VN KI DFG++ ++ A +V T
Sbjct: 150 VYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTR 205
Query: 247 TYMSPERIRNE-SYSYPADIWSIGLALFECGTGEFPYAASEG-------------PVNLM 292
Y +PE I + Y+ DIWS+G + E TG+ + + P
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 265
Query: 293 LQILEDPS--------PSPSRQNF-------SPEFCSFVDDCLKKDAEARPTADQLLSHP 337
+Q L D + P R++F SP+ ++ L+ D + R TA Q L+HP
Sbjct: 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325
Query: 338 FITKY 342
F +
Sbjct: 326 FFEPF 330
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDG 165
+ + K + +K + LL E++ L + P L EF D G + E G
Sbjct: 62 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYTG 116
Query: 166 GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP---K 222
G L D + +K E + + +++L G++Y+H + +VHRD+KP NLL+ K + +
Sbjct: 117 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 175
Query: 223 ITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPY 282
I DFG+S E S M +GT Y++PE + + +Y D+WS G+ L+ +G P+
Sbjct: 176 IIDFGLSTHFEASKKMKDK-IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 233
Query: 283 -AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
A+E + ++ + P + S + L R +A L H +I
Sbjct: 234 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
Query: 342 Y 342
Y
Sbjct: 294 Y 294
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HRD++ AN+
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANI 150
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 151 LVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 209 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 266
Query: 330 ADQLLS 335
D L S
Sbjct: 267 FDYLRS 272
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I EYM+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEYMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+ LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 38/289 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 109
Query: 148 FYMPDSGQIS--IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
P Q+ + ++ G L +L+ Q + I +++ +L+GL Y+H +++H
Sbjct: 110 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVLH 167
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYSY 261
RD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 262 PADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------- 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 287
Query: 301 PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 288 PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 336
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I E+M GSL D L+ + +P+ L ++ +G++++ R+ +HRD++ AN+
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANI 315
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I S++ +D+WS G+
Sbjct: 316 LVSASLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGSFTIKSDVWSFGI 373
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P +++ LE P +N E + + C K E RPT
Sbjct: 374 LLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431
Query: 330 ADQLLS 335
+ + S
Sbjct: 432 FEYIQS 437
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I E+M GSL D L+ + +P+ L ++ +G++++ R+ +HRD++ AN+
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANI 142
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I S++ +D+WS G+
Sbjct: 143 LVSASLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGSFTIKSDVWSFGI 200
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P +++ LE P +N E + + C K E RPT
Sbjct: 201 LLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 258
Query: 330 ADQLLS 335
+ + S
Sbjct: 259 FEYIQS 264
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 16/262 (6%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDG 165
+ + K + +K + LL E++ L + P L EF D G + E G
Sbjct: 56 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEF-----FEDKGYFYLVGEVYTG 110
Query: 166 GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP---K 222
G L D + +K E + + +++L G++Y H + +VHRD+KP NLL+ K + +
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK-IVHRDLKPENLLLESKSKDANIR 169
Query: 223 ITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPY 282
I DFG+S E S +GT Y++PE + + +Y D+WS G+ L+ +G P+
Sbjct: 170 IIDFGLSTHFEAS-KKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 227
Query: 283 -AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
A+E + ++ + P + S + L R +A L H +I
Sbjct: 228 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287
Query: 342 Y--EHAKVDLAAFVRSVFDPMQ 361
Y E VD+ + ++ + Q
Sbjct: 288 YTKEQISVDVPSLDNAILNIRQ 309
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 34/284 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK--RNQLLTEIRTLCEAPCNEGLVEFHG 146
IG G V +A + TH I+ALK++ + + ++ + L EI L E ++ +V H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ ++++ E+ D + I+ S +LL+GL + H R+++HR
Sbjct: 69 VLH--SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-RNVLHR 125
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES-YSYPADI 265
D+KP NLL+N G K+ DFG++ + + V T+ Y P+ + YS D+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 266 WSIGLALFECGTGE---FPYAASEGPVNLMLQILEDPS--------------PSP----- 303
WS G E FP + + + ++L P+ P P
Sbjct: 186 WSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245
Query: 304 -SRQNFSPEFCS----FVDDCLKKDAEARPTADQLLSHPFITKY 342
S N P+ + + + LK + R +A++ L HP+ + +
Sbjct: 246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 14/261 (5%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IG G+ V+ AV T A KKI + E ++ EI + ++ + ++ +
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM-KSLDHPNIIRLYE 90
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
F D+ I + +E GG L + + ++ E + + K +L ++Y H + ++ HR
Sbjct: 91 TF--EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL-NVAHR 147
Query: 207 DIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
D+KP N L L P K+ DFG++A + M T VGT Y+SP+ + Y
Sbjct: 148 DLKPENFLF-LTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLEG-LYGPE 204
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ--NFSPEFCSFVDDCL 320
D WS G+ ++ G P++A +ML+I E P + N SP+ S + L
Sbjct: 205 CDEWSAGVMMYVLLCGYPPFSAPTD-XEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 263
Query: 321 KKDAEARPTADQLLSHPFITK 341
K + R T+ Q L H + K
Sbjct: 264 TKSPKQRITSLQALEHEWFEK 284
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTE 128
KT + +GSGA V + + + IA+KK++ I ++ + L
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 129 IRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK 188
++ + L F A + + + + M G L +I++ QK + + + +
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIY 161
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTY 248
++L+GL Y+H ++HRD+KP+NL VN KI DFG++ ++ + +V T Y
Sbjct: 162 QILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWY 217
Query: 249 MSPERIRNE-SYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE---------- 297
+PE + N Y+ DIWS+G + E TG + ++ +N + QI+
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDH-INQLQQIMRLTGTPPASVI 276
Query: 298 ------------DPSPSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPF 338
+ P ++NF+ F ++ L D + R TA + L+HP+
Sbjct: 277 SRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPY 336
Query: 339 ITKY 342
++Y
Sbjct: 337 FSQY 340
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 14/261 (5%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IG G+ V+ AV T A KKI + E ++ EI + ++ + ++ +
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM-KSLDHPNIIRLYE 73
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
F D+ I + +E GG L + + ++ E + + K +L ++Y H + ++ HR
Sbjct: 74 TF--EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL-NVAHR 130
Query: 207 DIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
D+KP N L L P K+ DFG++A + M T VGT Y+SP+ + Y
Sbjct: 131 DLKPENFLF-LTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLEG-LYGPE 187
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQ--NFSPEFCSFVDDCL 320
D WS G+ ++ G P++A +ML+I E P + N SP+ S + L
Sbjct: 188 CDEWSAGVMMYVLLCGYPPFSAPTD-XEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 246
Query: 321 KKDAEARPTADQLLSHPFITK 341
K + R T+ Q L H + K
Sbjct: 247 TKSPKQRITSLQALEHEWFEK 267
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L+ +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G+ + E G FP N +++ L PSP P+ + + P++
Sbjct: 207 DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 156 ISIALEYMDGGSLADILRMQK--SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ + + P L ++ +G++Y+ ++ +HRD++ AN+
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANV 141
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I ++ +D+WS G+
Sbjct: 142 LVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIKSDVWSFGI 199
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
L+E T G+ PY G N ++ L P +N E + C K+ AE RP
Sbjct: 200 LLYEIVTYGKIPYP---GRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERP 256
Query: 329 TADQLLS 335
T D L S
Sbjct: 257 TFDYLQS 263
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 39 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 96
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 97 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 152
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 153 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 210
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 211 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 270
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 271 LIRNLLKTEPTQRMTITEFMNHPWIMQ 297
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 40/291 (13%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEG 140
+GSGA V A T +A+KK++ I ++ + L ++ +
Sbjct: 37 LAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
L F A + + + + M G L +I++ QK + + + + ++L+GL Y+H
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA 154
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SY 259
++HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y
Sbjct: 155 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHY 210
Query: 260 SYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF-- 308
+ DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 211 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 270
Query: 309 -----------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 271 SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIR--TLCEAP 136
R+ IG G + V+ A HI T + +A+K I +K + N +L E+R + P
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + EY GG + D L E + F++++ + Y
Sbjct: 74 NIVKLFEV-----IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY 128
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H + +VHRD+K NLL++ KI DFG S + A F G Y +PE +
Sbjct: 129 CHQ-KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA-FCGAPPYAAPELFQG 186
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
IGSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 151
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 208
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSAD-I 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 209
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 269
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 30 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 87
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 88 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 143
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 144 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 201
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 202 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 261
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 262 LIRNLLKTEPTQRMTITEFMNHPWIMQ 288
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 82
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 83 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 138
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 139 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 196
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 256
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 257 LIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 82
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 83 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 138
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 139 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 196
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 256
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 257 LIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAP 136
R+ IG G + V+ A HI T + +A++ I +K + N +L E+R + P
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVR---IIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSY 196
L E + + + +EY GG + D L + E + F++++ + Y
Sbjct: 74 NIVKLFEV-----IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
H + +VHRD+K NLL++ KI DFG S + F G+ Y +PE +
Sbjct: 129 CHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DEFCGSPPYAAPELFQG 186
Query: 257 ESYSYP-ADIWSIGLALFECGTGEFPY 282
+ Y P D+WS+G+ L+ +G P+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 126
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 127 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 182
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 183 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 240
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 300
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 301 LIRNLLKTEPTQRMTITEFMNHPWIMQ 327
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 23 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 80
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 81 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 136
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 137 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 194
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 254
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 255 LIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 75 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 132
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 133 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 188
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 189 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 246
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 247 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 306
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 307 LIRNLLKTEPTQRMTITEFMNHPWIMQ 333
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 29 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 86
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 87 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 142
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 143 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 200
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 201 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 260
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 261 LIRNLLKTEPTQRMTITEFMNHPWIMQ 287
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 38/266 (14%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
IGSG V +A H + +K++ + EK + E++ L + + +V ++G +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVK-YNNEKAER---EVKALAKLD-HVNIVHYNGCW 73
Query: 149 ----YMPDSGQ----------ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQ 192
Y P++ + I +E+ D G+L + R + + + + +F+++ +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 193 GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPE 252
G+ Y+H + L++RD+KP+N+ + + KI DFG+ L+N + GT+ YMSPE
Sbjct: 134 GVDYIHS-KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS-KGTLRYMSPE 191
Query: 253 RIRNESYSYPADIWSIGLALFE----CGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNF 308
+I ++ Y D++++GL L E C T + S+ +L I+ D F
Sbjct: 192 QISSQDYGKEVDLYALGLILAELLHVCDTA---FETSKFFTDLRDGIISDI--------F 240
Query: 309 SPEFCSFVDDCLKKDAEARPTADQLL 334
+ + + L K E RP ++L
Sbjct: 241 DKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 209
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 269
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 24 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 81
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 82 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 137
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 138 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 195
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 196 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 255
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 256 LIRNLLKTEPTQRMTITEFMNHPWIMQ 282
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ I I L M ++ +G++++ R+ +HR+++ AN+
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-RNYIHRNLRAANI 136
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I +++ +D+WS G+
Sbjct: 137 LVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGI 194
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY P ++Q LE N E + C K+ E RPT
Sbjct: 195 LLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 252
Query: 330 ADQLLS 335
D L S
Sbjct: 253 FDYLRS 258
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 31 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 88
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 89 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 144
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 145 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 202
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 203 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 262
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 263 LIRNLLKTEPTQRMTITEFMNHPWIMQ 289
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 148
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 205
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH + + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPAFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 27/268 (10%)
Query: 83 MRIFGAIGSGA-SSVVQRAVHIPTHRIIALK----KINIFEKEKRNQLLTEIRTLCEAPC 137
++I IG+G V + +P R +A+ K+ EK++R+ LCEA
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD-------FLCEASI 97
Query: 138 -----NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLL 191
+ +V G + + I +E+M+ G+L LR I L M + +
Sbjct: 98 MGQFDHPNVVHLEGV--VTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIA 155
Query: 192 QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTY 248
G+ YL + + VHRD+ N+LVN K++DFG+S +E+ T G V +
Sbjct: 156 AGMRYLADMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 249 MSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQN 307
+PE I+ ++ +D+WS G+ ++E + GE PY +++ +E+ P+ +
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVIKAIEEGYRLPAPMD 272
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ DC +K+ RP +Q++
Sbjct: 273 CPAGLHQLMLDCWQKERAERPKFEQIVG 300
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 142
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 199
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 259
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
I +G+GA VV R T A K + + + + EI+T+ + LV
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMS-VLRHPTLVNL 113
Query: 145 HGAFYMPDSGQISIALEYMDGGSLAD-ILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
H AF D ++ + E+M GG L + + + E +++ +GL ++H +
Sbjct: 114 HDAF--EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE-NNY 170
Query: 204 VHRDIKPANLLVNLK--GRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
VH D+KP N++ K K+ DFG++A L+ ++ T GT + +PE + Y
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGY 229
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLM-LQILEDPSPSPSRQNFSPEFCSFVDDCL 320
D+WS+G+ + +G P+ L ++ + + S + F+ L
Sbjct: 230 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLL 289
Query: 321 KKDAEARPTADQLLSHPFIT 340
D R T Q L HP++T
Sbjct: 290 LADPNTRMTIHQALEHPWLT 309
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 166
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 223
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 283
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 109 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 165
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 222
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 282
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 283 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L+ +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G+ + E G FP N +++ L PSP P+ + + P++
Sbjct: 207 DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 52/302 (17%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN------IFEKEKRNQLLT 127
KTY +H +GSGA V A+ + +A+KK++ IF K +LL
Sbjct: 24 KTYVSPTH-------VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 76
Query: 128 EIRTLCEAPCNEGLVE-FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSM 186
E GL++ F A + + + + +M L I+ ++ S E + +
Sbjct: 77 LKHMQHENVI--GLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFS--EEKIQYL 131
Query: 187 FKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV 246
++L+GL Y+H +VHRD+KP NL VN KI DFG++ ++ A +V T
Sbjct: 132 VYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTR 187
Query: 247 TYMSPERIRNE-SYSYPADIWSIGLALFECGTGEFPYAASEG-------------PVNLM 292
Y +PE I + Y+ DIWS+G + E TG+ + + P
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247
Query: 293 LQILEDPS--------PSPSRQNF-------SPEFCSFVDDCLKKDAEARPTADQLLSHP 337
+Q L D + P R++F SP+ ++ L+ D + R TA Q L+HP
Sbjct: 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307
Query: 338 FI 339
F
Sbjct: 308 FF 309
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 88 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 146
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 147 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 205
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 206 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 258
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 259 PKKRMTIQDSLQHPWI 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 88 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 146
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 147 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 205
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 206 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 258
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 259 PKKRMTIQDSLQHPWI 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH + + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
+ + LE + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIML 147
Query: 216 ---NL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
N+ K R KI DFG++ ++ F GT +++PE + E AD+WSIG+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKD 323
+ +G P+ L + S F E+ S F+ L KD
Sbjct: 207 TYILLSGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 324 AEARPTADQLLSHPFI 339
+ R T L HP+I
Sbjct: 260 PKKRMTIQDSLQHPWI 275
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 157
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 214
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 274
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 158 IALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E+ D G+L + R + + + + +F+++ +G+ Y+H + L+HRD+KP+N+ +
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS-KKLIHRDLKPSNIFL 169
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE- 274
+ KI DFG+ L+N + GT+ YMSPE+I ++ Y D++++GL L E
Sbjct: 170 VDTKQVKIGDFGLVTSLKNDGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
Query: 275 ---CGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTAD 331
C T + S+ +L I+ D F + + + L K E RP
Sbjct: 229 LHVCDTA---FETSKFFTDLRDGIISDI--------FDKKEKTLLQKLLSKKPEDRPNTS 277
Query: 332 QLL 334
++L
Sbjct: 278 EIL 280
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 151
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 208
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 21/258 (8%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRII--ALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLV 142
FG + SG + +P+ + I A+K + + + +++R L E + + + ++
Sbjct: 29 FGEVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNII 80
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVR 201
G + S + I E M+ GSL LR + I L M + + G+ YL +
Sbjct: 81 RLEGV--VTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 202 HLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRNES 258
+ VHRD+ N+L+N K++DFG+S LE+ T G + + SPE I
Sbjct: 139 Y-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 259 YSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
++ +D+WS G+ L+E + GE PY E +++ +++ P + +
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYW--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLML 255
Query: 318 DCLKKDAEARPTADQLLS 335
DC +KD RP +Q++S
Sbjct: 256 DCWQKDRNNRPKFEQIVS 273
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNAMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 77 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 135 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 191
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 242
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 243 CLALRPSDRPTFEEIQNHPWM 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I E M+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEXMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 76 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 134 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 190
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 241
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 242 CLALRPSDRPTFEEIQNHPWM 262
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 157
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 214
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 274
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
I +G+GA VV R T A K + + + + EI+T+ + LV
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMS-VLRHPTLVNL 219
Query: 145 HGAFYMPDSGQISIALEYMDGGSLAD-ILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
H AF D ++ + E+M GG L + + + E +++ +GL ++H +
Sbjct: 220 HDAF--EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE-NNY 276
Query: 204 VHRDIKPANLLVNLK--GRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
VH D+KP N++ K K+ DFG++A L+ ++ T GT + +PE + Y
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGY 335
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLM-LQILEDPSPSPSRQNFSPEFCSFVDDCL 320
D+WS+G+ + +G P+ L ++ + + S + F+ L
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLL 395
Query: 321 KKDAEARPTADQLLSHPFIT 340
D R T Q L HP++T
Sbjct: 396 LADPNTRMTIHQALEHPWLT 415
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLH 198
G++ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 73 GVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 199 GVRHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR
Sbjct: 131 NC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYH 187
Query: 258 SY-SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
Y A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLI 238
Query: 317 DDCLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 239 RWCLALRPSDRPTFEEIQNHPWM 261
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLH 198
G++ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 117 GVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 199 GVRHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR
Sbjct: 175 NC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYH 231
Query: 258 SY-SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
Y A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLI 282
Query: 317 DDCLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 283 RWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 20/263 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEK--EKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG V + ++ ++A+K I EK E + + R+L + +V F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR----HPNIVRFKE 81
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
P ++I +EY GG L + + E F++L+ G+SY H ++ + HR
Sbjct: 82 VILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ-VCHR 138
Query: 207 DIKPANLLVNLKGRP--KITDFGISAGLENSI--AMCATFVGTVTYMSPERIRNESYS-Y 261
D+K N L++ P KI DFG S ++S+ + + VGT Y++PE + + Y
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYS---KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNL---MLQILEDPSPSPSRQNFSPEFCSFVDD 318
AD+WS G+ L+ G +P+ E P N + +IL P + SPE +
Sbjct: 196 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 255
Query: 319 CLKKDAEARPTADQLLSHPFITK 341
D R + ++ +H + K
Sbjct: 256 IFVADPAKRISIPEIRNHEWFLK 278
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 92 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 150 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 206
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 257
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 258 CLALRPSDRPTFEEIQNHPWM 278
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 77 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 135 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 191
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 242
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 243 CLALRPSDRPTFEEIQNHPWM 263
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 72 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 130 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 186
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSSECQHLIRW 237
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 238 CLALRPSDRPTFEEIQNHPWM 258
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 158
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 215
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 275
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 158
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 215
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 275
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 158
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 215
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 275
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 34/284 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK--RNQLLTEIRTLCEAPCNEGLVEFHG 146
IG G V +A + TH I+ALK++ + + ++ + L EI L E ++ +V H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHD 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
+ ++++ E+ D + I+ S +LL+GL + H R+++HR
Sbjct: 69 VLH--SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-RNVLHR 125
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES-YSYPADI 265
D+KP NLL+N G K+ +FG++ + + V T+ Y P+ + YS D+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 266 WSIGLALFE---CGTGEFPYAASEGPVNLMLQILEDPS--------------PSP----- 303
WS G E G FP + + + ++L P+ P P
Sbjct: 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT 245
Query: 304 -SRQNFSPEFCS----FVDDCLKKDAEARPTADQLLSHPFITKY 342
S N P+ + + + LK + R +A++ L HP+ + +
Sbjct: 246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 111 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 168
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 169 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 225
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 276
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 277 CLALRPSDRPTFEEIQNHPWM 297
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 153
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 210
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L A +E ++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-AFRHENIIGINDI 91
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 92 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 148
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLS 268
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 269 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSAD-I 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 209
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 269
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 186 MFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLK-GRPKITDFGISAGLENSIAMCATFVG 244
F +++ + + H R +VHRDIK N+L++L+ G K+ DFG A L + F G
Sbjct: 144 FFGQVVAAIQHCHS-RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY--TDFDG 200
Query: 245 TVTYMSPERI-RNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSP 303
T Y PE I R++ ++ PA +WS+G+ L++ G+ P+ + +ILE P
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEAELHFP 253
Query: 304 SRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
+ + SP+ C+ + CL +RP+ +++L P++
Sbjct: 254 A--HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 50/295 (16%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKI------NIFEKEKRNQLLTEIRTLCEAPC 137
R +GSGA V AV T +A+KK+ +F K +L L +
Sbjct: 28 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL-----RLLKHMR 82
Query: 138 NEGLVEFHGAFY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG 193
+E ++ F + D + + +M G L +++ +K + E + + ++L+G
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK-LGEDRIQFLVYQMLKG 140
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPER 253
L Y+H ++HRD+KP NL VN KI DFG++ ++ + V T Y +PE
Sbjct: 141 LRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM---XGXVVTRWYRAPEV 196
Query: 254 IRNE-SYSYPADIWSIGLALFECGTGEFPYAASEG--------------PVNLMLQILED 298
I N Y+ DIWS+G + E TG+ + S+ P + ++ D
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD 256
Query: 299 PS-------PSPSRQNF-------SPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
+ P +++F SP + ++ L DAE R TA + L+HP+
Sbjct: 257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 91 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 149 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 205
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 256
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 257 CLALRPSDRPTFEEIQNHPWM 277
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLH 198
G++ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 70 GVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 199 GVRHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR
Sbjct: 128 NC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYH 184
Query: 258 SY-SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
Y A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLI 235
Query: 317 DDCLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 236 RWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 151
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 208
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 151
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 208
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 268
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 105 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 163 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 219
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSSECQHLIRW 270
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 271 CLALRPSDRPTFEEIQNHPWM 291
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 89 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 145
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 202
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 203 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 262
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 263 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 143
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 200
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 260
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 261 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 92 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 150 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 206
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSXECQHLIRW 257
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 258 CLALRPSDRPTFEEIQNHPWM 278
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 148
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 205
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 77 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 135 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 191
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 242
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 243 CLALRPSDRPTFEEIQNHPWM 263
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 169
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 226
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 286
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 287 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 148
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 205
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLH 198
G++ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 102 GVIRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 199 GVRHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE 257
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR
Sbjct: 160 NC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYH 216
Query: 258 SY-SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
Y A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLI 267
Query: 317 DDCLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 268 RWCLALRPSDRPTFEEIQNHPWM 290
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 209
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 269
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 169
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---XGYVATRWYRAPEIMLNWMHYNQT 226
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 286
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 287 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 105 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 163 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 219
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSSECQHLIRW 270
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 271 CLALRPSDRPTFEEIQNHPWM 291
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 24/265 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN----IFEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
IGSG V + T ++A+K I I E +R + R+L + +V F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQRE--IINHRSLR----HPNIVRF 81
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P ++I +EY GG L + + E F++LL G+SY H ++ +
Sbjct: 82 KEVILTP--THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ-IC 138
Query: 205 HRDIKPANLLVNLKGRP--KITDFGISAGLENSI--AMCATFVGTVTYMSPERIRNESYS 260
HRD+K N L++ P KI DFG S ++S+ + + VGT Y++PE + + Y
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYS---KSSVLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 261 YP-ADIWSIGLALFECGTGEFPYAASEGPVNL---MLQILEDPSPSPSRQNFSPEFCSFV 316
AD+WS G+ L+ G +P+ E P + + +IL P SPE C +
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI 255
Query: 317 DDCLKKDAEARPTADQLLSHPFITK 341
D R + ++ +H + K
Sbjct: 256 SRIFVADPATRISIPEIKTHSWFLK 280
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 119 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 177 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 233
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSSECQHLIRW 284
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 285 CLALRPSDRPTFEEIQNHPWM 305
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKSQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG+ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 109 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 165
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 222
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 282
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 283 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 104 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 162 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 218
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSSECQHLIRW 269
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 270 CLALRPSDRPTFEEIQNHPWM 290
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 91 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 149 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 205
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSXECQHLIRW 256
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 257 CLALRPSDRPTFEEIQNHPWM 277
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 148
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 205
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 265
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 99 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 156
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 157 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 213
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSXECQHLIRW 264
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 265 CLALRPSDRPTFEEIQNHPWM 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 105 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 163 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 219
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSXECQHLIRW 270
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 271 CLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 104 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 162 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 218
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSXECQHLIRW 269
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 270 CLALRPSDRPTFEEIQNHPWM 290
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 166
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 223
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 283
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 143
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 200
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 260
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 261 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 142
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 199
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 259
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 88 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 144
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 201
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 202 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 261
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 262 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 104 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 162 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 218
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSSECQHLIRW 269
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 270 CLALRPSDRPTFEEIQNHPWM 290
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 72 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNX 129
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 130 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 186
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSXECQHLIRW 237
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 238 CLALRPSDRPTFEEIQNHPWM 258
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 36/280 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + ALKKI + EKE T IR ++ + + +V+ +
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRL-EKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK-KLLQGLSYLHGVRHLVH 205
+ ++ + E++D L +L + + E + + F +LL G++Y H R ++H
Sbjct: 68 VIHT--KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD-RRVLH 123
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR-NESYSYPAD 264
RD+KP NLL+N +G KI DFG++ + V T+ Y +P+ + ++ YS D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 265 IWSIGLALFEC--GTGEFPYAASEGPVNLMLQIL------------EDPSPSPSRQNFSP 310
IWS+G E GT FP + + + +IL E P P+ + P
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243
Query: 311 ----EFCSFVDDC--------LKKDAEARPTADQLLSHPF 338
F +D+ LK D R TA Q L H +
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 92 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 150 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 206
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSXECQHLIRW 257
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 258 CLALRPXDRPTFEEIQNHPWM 278
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 105 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 163 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 219
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFF---------RQRVSXECQHLIRW 270
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 271 CLALRPSDRPTFEEIQNHPWM 291
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 119 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 177 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 233
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSXECQHLIRW 284
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 285 CLALRPSDRPTFEEIQNHPWM 305
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 24/272 (8%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN--------IFEKEKRNQLLTEIRT 131
S + +GSGA V AV ++ + +K I E K ++ EI
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALE-YMDGGSLADILRMQKSIPEPILSSMFKKL 190
L + +++ F + G + +E + G L + + EP+ S +F++L
Sbjct: 83 LSRVE-HANIIKVLDIF--ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMS 250
+ + YL ++ ++HRDIK N+++ K+ DFG +A LE + TF GT+ Y +
Sbjct: 140 VSAVGYLR-LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCA 197
Query: 251 PERIRNESYSYPA-DIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFS 309
PE + Y P ++WS+G+ L+ E P+ E V + S
Sbjct: 198 PEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIH---------PPYLVS 248
Query: 310 PEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
E S V L+ E R T ++L++ P++T+
Sbjct: 249 KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L+ +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L PSP P+ + + P++
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I E+M GSL D L+ + +P+ L ++ +G++++ R+ +HRD++ AN+
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANI 309
Query: 214 LVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALF 273
LV+ KI DFG++ + A F + + +PE I S++ +D+WS G+ L
Sbjct: 310 LVSASLVCKIADFGLA-------RVGAKF--PIKWTAPEAINFGSFTIKSDVWSFGILLM 360
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E T G PY P +++ LE P +N E + + C K E RPT +
Sbjct: 361 EIVTYGRIPYPGMSNPE--VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 418
Query: 333 LLS 335
+ S
Sbjct: 419 IQS 421
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNE-------GL 141
+GSG V + + + +A+K + +L R E + G+
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 142 VEFHGAFYMPDSGQISIALEYMDG-GSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ F PDS + LE + L D + + ++ E + S F ++L+ + + H
Sbjct: 124 IRLLDWFERPDS--FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 181
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
++HRDIK N+L++L +G K+ DFG A L++++ F GT Y PE IR Y
Sbjct: 182 -GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRY 238
Query: 260 -SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
A +WS+G+ L++ G+ P+ E + + RQ S E +
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------RQRVSXECQHLIRW 289
Query: 319 CLKKDAEARPTADQLLSHPFI 339
CL RPT +++ +HP++
Sbjct: 290 CLALRPSDRPTFEEIQNHPWM 310
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 18/262 (6%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEK--EKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IG+G V + + ++A+K I EK E + + R+L + +V F
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLR----HPNIVRFKE 82
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
P ++I +EY GG L + + E F++L+ G+SY H ++ + HR
Sbjct: 83 VILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ-VAHR 139
Query: 207 DIKPANLLVNLKGRP--KITDFGIS-AGLENSIAMCATFVGTVTYMSPERIRNESYS-YP 262
D+K N L++ P KI DFG S A + +S A VGT Y++PE + + Y
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA--VGTPAYIAPEVLLKKEYDGKV 197
Query: 263 ADIWSIGLALFECGTGEFPYAASEGPVNL---MLQILEDPSPSPSRQNFSPEFCSFVDDC 319
AD+WS G+ L+ G +P+ E P N + +IL P + SPE +
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRI 257
Query: 320 LKKDAEARPTADQLLSHPFITK 341
D R + ++ +H + K
Sbjct: 258 FVADPAKRISIPEIRNHEWFLK 279
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 15/257 (5%)
Query: 88 AIGSGA-SSVVQRAVHIPTHR--IIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVE 143
IG+G V + +P R +A+K + + + +++R L E + + + ++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIH 87
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRH 202
G + S + I EYM+ GSL L+ I L M + + G+ YL + +
Sbjct: 88 LEGV--VTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG---TVTYMSPERIRNESY 259
VHRD+ N+L+N K++DFG+S LE+ T G + + +PE I +
Sbjct: 146 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 260 SYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD 318
+ +D+WS G+ ++E + GE PY E +++ +E+ PS + + D
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYW--EMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLD 262
Query: 319 CLKKDAEARPTADQLLS 335
C +K+ +RP D++++
Sbjct: 263 CWQKERNSRPKFDEIVN 279
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKIN--IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G+ V+ A H T + +ALK I+ + +K + + + + + +++ +
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLY 75
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH-LV 204
P I + +EY GG L D + +K + E F++++ + Y H RH +V
Sbjct: 76 DVITTPTD--IVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH--RHKIV 130
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP-A 263
HRD+KP NLL++ KI DFG+S + + T G+ Y +PE I + Y+ P
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 264 DIWSIGLALFECGTGEFPY 282
D+WS G+ L+ G P+
Sbjct: 190 DVWSCGIVLYVMLVGRLPF 208
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L A +E ++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-AFRHENIIGINDI 91
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 92 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 148
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 268
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 269 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AF+ PD ++S L+ M+GG L L E + +++ GL ++H R +V+R
Sbjct: 259 AFHTPD--KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN-RFVVYR 315
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-RNESYSYPADI 265
D+KPAN+L++ G +I+D G++ + VGT YM+PE + + +Y AD
Sbjct: 316 DLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADW 373
Query: 266 WSIGLALFECGTGEFPY----AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
+S+G LF+ G P+ + ++ M + P +FSPE S ++ L+
Sbjct: 374 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQ 429
Query: 322 KDAEAR 327
+D R
Sbjct: 430 RDVNRR 435
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 21/267 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 23 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 80
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 81 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 136
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T Y++PE + E Y
Sbjct: 137 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTEPCY-TPYYVAPEVLGPEKY 194
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 254
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 255 LIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AF+ PD ++S L+ M+GG L L E + +++ GL ++H R +V+R
Sbjct: 260 AFHTPD--KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN-RFVVYR 316
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-RNESYSYPADI 265
D+KPAN+L++ G +I+D G++ + VGT YM+PE + + +Y AD
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADW 374
Query: 266 WSIGLALFECGTGEFPY----AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
+S+G LF+ G P+ + ++ M + P +FSPE S ++ L+
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQ 430
Query: 322 KDAEAR 327
+D R
Sbjct: 431 RDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AF+ PD ++S L+ M+GG L L E + +++ GL ++H R +V+R
Sbjct: 260 AFHTPD--KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN-RFVVYR 316
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-RNESYSYPADI 265
D+KPAN+L++ G +I+D G++ + VGT YM+PE + + +Y AD
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADW 374
Query: 266 WSIGLALFECGTGEFPY----AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
+S+G LF+ G P+ + ++ M + P +FSPE S ++ L+
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQ 430
Query: 322 KDAEAR 327
+D R
Sbjct: 431 RDVNRR 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
AF+ PD ++S L+ M+GG L L E + +++ GL ++H R +V+R
Sbjct: 260 AFHTPD--KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN-RFVVYR 316
Query: 207 DIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-RNESYSYPADI 265
D+KPAN+L++ G +I+D G++ + VGT YM+PE + + +Y AD
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYDSSADW 374
Query: 266 WSIGLALFECGTGEFPY----AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
+S+G LF+ G P+ + ++ M + P +FSPE S ++ L+
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQ 430
Query: 322 KDAEAR 327
+D R
Sbjct: 431 RDVNRR 436
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 20/263 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN--QLLTEIRTLCEAPCNEGLVEFHG 146
IGSG V + ++ ++A+K I EK N + + R+L + +V F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLR----HPNIVRFKE 82
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
P ++I +EY GG L + + E F++L+ G+SY H ++ + HR
Sbjct: 83 VILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ-VCHR 139
Query: 207 DIKPANLLVNLKGRP--KITDFGISAGLENSI--AMCATFVGTVTYMSPERIRNESYS-Y 261
D+K N L++ P KI DFG S ++S+ + + VGT Y++PE + + Y
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYS---KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNL---MLQILEDPSPSPSRQNFSPEFCSFVDD 318
AD+WS G+ L+ G +P+ E P N + +IL P + SPE +
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 319 CLKKDAEARPTADQLLSHPFITK 341
D R + ++ +H + K
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLK 279
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 126/280 (45%), Gaps = 36/280 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + ALKKI + EKE T IR ++ + + +V+ +
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRL-EKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK-KLLQGLSYLHGVRHLVH 205
+ ++ + E++D L +L + + E + + F +LL G++Y H R ++H
Sbjct: 68 VIHT--KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD-RRVLH 123
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR-NESYSYPAD 264
RD+KP NLL+N +G KI DFG++ + + T+ Y +P+ + ++ YS D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 265 IWSIGLALFEC--GTGEFPYAASEGPVNLMLQIL------------EDPSPSPSRQNFSP 310
IWS+G E GT FP + + + +IL E P P+ + P
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243
Query: 311 ----EFCSFVDDC--------LKKDAEARPTADQLLSHPF 338
F +D+ LK D R TA Q L H +
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 143/320 (44%), Gaps = 46/320 (14%)
Query: 89 IGSGASSVVQRAV-HIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNE--GLVEF 144
IG GA +V A H+ R+ A+KKI+ FE + Q L EI+ L G+ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRV-AIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
A + + I + M+ L +L+ Q+ + I +++ +L+GL Y+H +++
Sbjct: 110 LRASTLEAMRDVYIVQDLMET-DLYKLLKSQQLSNDHICYFLYQ-ILRGLKYIHSA-NVL 166
Query: 205 HRDIKPANLLVNLKGRPKITDFG---ISAGLENSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG I+ + V T Y +PE + N + Y+
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQS 286
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY-----EHAKV 347
PS ++ ++ F +D L + R T ++ L+HP++ +Y E
Sbjct: 287 LPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAE 346
Query: 348 DLAAFVRSVFD-PMQRMKDL 366
+ F + D P +R+K+L
Sbjct: 347 EPFTFAMELDDLPKERLKEL 366
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 109 IALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + + + +++R L E + + + ++ G + S + I E M+ GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGV--VTKSKPVMIVTEXMENGS 132
Query: 168 LADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDF 226
L LR + I L M + + G+ YL + VHRD+ N+L+N K++DF
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM-GAVHRDLAARNILINSNLVCKVSDF 191
Query: 227 GISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
G+S LE+ T G + + SPE I ++ +D+WS G+ L+E + GE PY
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
E +++ +++ P + + DC +KD RP +Q++S
Sbjct: 252 W--EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 153
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ + + +V T Y +PE + N Y+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADEM---TGYVATRWYRAPEIMLNWMHYNQT 210
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR-HENIIGINDI 93
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 150
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L+ +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L PSP P+ + + P++
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 153
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ + + +V T Y +PE + N Y+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADEM---TGYVATRWYRAPEIMLNWMHYNQT 210
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI D+G++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 32/274 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKE-KRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G VV A + A+K+I + +E R +++ E++ L + + G+V + A
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE-HPGIVRYFNA 71
Query: 148 FYMPDSGQ----------ISIALEYMDGGSLADILRMQKSIPE---PILSSMFKKLLQGL 194
+ ++ + + I ++ +L D + + +I E + +F ++ + +
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN------------SIAMCATF 242
+LH + L+HRD+KP+N+ + K+ DFG+ ++ + A
Sbjct: 132 EFLHS-KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 243 VGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPS 302
VGT YMSPE+I SYS+ DI+S+GL LFE +P++ V + + P
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDVRNLKFPP 247
Query: 303 PSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSH 336
Q + E+ V D L RP A ++ +
Sbjct: 248 LFTQKYPCEYV-MVQDMLSPSPMERPEAINIIEN 280
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 153
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ + + +V T Y +PE + N Y+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADEM---TGYVATRWYRAPEIMLNWMHYNQT 210
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 270
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 22/223 (9%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
+G G + V + T ++ALK+I + +E T IR +L + + +V H
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 147 AFYMPDSGQISIALEYMDGG------SLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+ S +++ EY+D +I+ M + +LL+GL+Y H
Sbjct: 68 IIHTEKS--LTLVFEYLDKDLKQYLDDCGNIINMHN------VKLFLFQLLRGLAYCHRQ 119
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES-Y 259
+ ++HRD+KP NLL+N +G K+ DFG++ V T+ Y P+ + + Y
Sbjct: 120 K-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 260 SYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS 300
S D+W +G +E TG FP + E ++ + +IL P+
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDI 89
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 146
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLS 266
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 89
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 146
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 266
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 166
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + V T Y +PE + N Y+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---XGXVATRWYRAPEIMLNWMHYNQT 223
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 283
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 89
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 146
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLS 266
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV-HRDIKPANLLVN 216
+ +EY+ GG L D + + E +F+++L + Y H RH+V HRD+KP N+L++
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH--RHMVVHRDLKPENVLLD 145
Query: 217 LKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP-ADIWSIGLALFEC 275
KI DFG+S + + T G+ Y +PE I Y+ P DIWS G+ L+
Sbjct: 146 AHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
Query: 276 GTGEFPYAASEGP 288
G P+ P
Sbjct: 205 LCGTLPFDDEHVP 217
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L+ +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L PSP P+ + + P++
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
IG G VV +A + ALKKI + EKE T IR ++ + + +V+ +
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRL-EKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK-KLLQGLSYLHGVRHLVH 205
+ ++ + E++D L +L + + E + + F +LL G++Y H R ++H
Sbjct: 68 VIHT--KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD-RRVLH 123
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR-NESYSYPAD 264
RD+KP NLL+N +G KI DFG++ + V T+ Y +P+ + ++ YS D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 265 IWSIGLALFECGTGE--FPYAASEGPVNLMLQIL------------EDPSPSPSRQNFSP 310
IWS+G E G FP + + + +IL E P P+ + P
Sbjct: 184 IWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243
Query: 311 ----EFCSFVDDC--------LKKDAEARPTADQLLSHPF 338
F +D+ LK D R TA Q L H +
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 91
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 92 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 148
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 268
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 269 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 318
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 150 MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIK 209
D + E+ +GG L + + + E +++ K++L G+ YLH ++VHRDIK
Sbjct: 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK-HNIVHRDIK 173
Query: 210 PANLLVNLKG---RPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
P N+L+ K KI DFG+S+ + +GT Y++PE ++ + Y+ D+W
Sbjct: 174 PENILLENKNSLLNIKIVDFGLSSFFSKDYKL-RDRLGTAYYIAPEVLK-KKYNEKCDVW 231
Query: 267 SIGLALF--ECGTGEFPYAASEGPVNLMLQILEDPS--PSPSRQNFSPEFCSFVDDCLKK 322
S G+ ++ CG +P + +++ ++ + +N S E + L
Sbjct: 232 SCGVIMYILLCG---YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTY 288
Query: 323 DAEARPTADQLLSHPFITKY 342
D R TA++ L+ +I KY
Sbjct: 289 DYNKRCTAEEALNSRWIKKY 308
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 161 EYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV---NL 217
E + GG L D L ++S+ E + K++L G+ YLH ++ + H D+KP N+++ N+
Sbjct: 94 ELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNV 152
Query: 218 -KGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECG 276
K R KI DFG++ ++ F GT +++PE + E AD+WSIG+ +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 277 TGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS--------FVDDCLKKDAEARP 328
+G P+ L + S F E+ S F+ L KD + R
Sbjct: 212 SGASPFLGDTKQETL-------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 329 TADQLLSHPFI 339
T L HP+I
Sbjct: 265 TIQDSLQHPWI 275
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 93
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 150
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 97
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 98 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 154
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 215 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 274
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 275 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 324
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 89
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 146
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 266
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 89
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 146
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 266
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 267 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ K + + + + ++L+GL Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCAK-LTDDHVQFLIYQILRGLKYIHSA-DI 142
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + +V T Y +PE + N Y+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 199
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLA 259
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 109
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 110 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 166
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 286
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 287 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 336
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 156 ISIALEYMDGGSLADILRMQK--SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I E+M GSL D L+ + + P L ++ +G++Y+ ++ +HRD++ AN+
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANV 140
Query: 214 LVNLKGRPKITDFGISAGLENSIAMC---ATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV+ KI DFG++ +E++ A F + + +PE I ++ +++WS G+
Sbjct: 141 LVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIKSNVWSFGI 198
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
L+E T G+ PY G N ++ L P +N E + C K+ AE RP
Sbjct: 199 LLYEIVTYGKIPYP---GRTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERP 255
Query: 329 TADQLLS 335
T D L S
Sbjct: 256 TFDYLQS 262
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DFG++ ++ + V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGXVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 94
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 95 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 151
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 271
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 272 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 321
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 95
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 96 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 152
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 213 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 272
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 273 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 322
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 86
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 87 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 143
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 204 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 263
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 264 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 313
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 93
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 150
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 87
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 88 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 144
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 264
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 265 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 314
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 75
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 73
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 76
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 69
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 101
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 93
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMET-DLYKLLKCQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 150
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 70
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 77
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 68
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 74
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 70
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 70
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I +EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +KD
Sbjct: 204 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKDP 256
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 257 EERPTFEYL 265
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 21/266 (7%)
Query: 83 MRIFGAIGSGA-SSVVQRAVHIPTHR--IIALKKINI-FEKEKRNQLLTEIRTLCEAPCN 138
++I IG+G V + +P R +A+K + + +++R L+E + + +
Sbjct: 35 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-H 93
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
++ G + S + I E+M+ GSL LR I L M + + G+ YL
Sbjct: 94 PNVIHLEGV--VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 151
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA---MCATFVGT--VTYMSPE 252
+ + VHRD+ N+LVN K++DFG+S LE+ + + G + + +PE
Sbjct: 152 ADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPY--AASEGPVNLMLQILEDPSPSPSRQNFS 309
I+ ++ +D+WS G+ ++E + GE PY ++ +N + Q P P +
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP----MDCP 266
Query: 310 PEFCSFVDDCLKKDAEARPTADQLLS 335
+ DC +KD RP Q+++
Sbjct: 267 SALHQLMLDCWQKDRNHRPKFGQIVN 292
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I +EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILED-------PSPSPSRQNFSPEFCSFVDDCLKK 322
L E T G PY G VN ++L+ P P ++ C C +K
Sbjct: 204 LLTELTTKGRVPYP---GMVN--REVLDQVERGYRMPCPPECPESLHDLMCQ----CWRK 254
Query: 323 DAEARPTADQL 333
D E RPT + L
Sbjct: 255 DPEERPTFEYL 265
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L+ +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L PSP P+ + + P++
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 88
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI DF ++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 88
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A++KI+ FE + Q L EI+ L +E ++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 93
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 150
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 37/299 (12%)
Query: 72 SEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEK--RNQLLTEI 129
+E Y + + G +G G+ +V + + T RI+A+KK + +K + + EI
Sbjct: 16 TENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREI 75
Query: 130 RTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKK 189
+ L + +E LV + + E++D L D+ + ++ +
Sbjct: 76 KLLKQLR-HENLVNLLEV--CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 190 LLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYM 249
++ G+ + H +++HRDIKP N+LV+ G K+ DFG + L + V T Y
Sbjct: 133 IINGIGFCHS-HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
Query: 250 SPERIRNE-SYSYPADIWSIGLALFECGTGE--FPYAA---------------------- 284
+PE + + Y D+W+IG + E GE FP +
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL 251
Query: 285 -SEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDD----CLKKDAEARPTADQLLSHPF 338
++ PV +++ E P + + P+ V D CL D + RP +LL H F
Sbjct: 252 FNKNPVFAGVRLPEIKEREPLERRY-PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALK---KINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G V A +H I+ALK K I ++ +QL EI + ++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-HHPNILRLY 89
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVH 205
FY D +I + LEY G L L+ + E +++ ++L L Y HG + ++H
Sbjct: 90 NYFY--DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG-KKVIH 146
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
RDIKP NLL+ LKG KI DFG S + T GT+ Y+ PE I ++ D+
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWSVHAPS--LRRKTMCGTLDYLPPEMIEGRMHNEKVDL 204
Query: 266 WSIGLALFECGTGEFPYAAS---EGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKK 322
W IG+ +E G P+ ++ E ++ L+ P+ P+ + L+
Sbjct: 205 WCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQ------DLISKLLRH 258
Query: 323 DAEARPTADQLLSHPFI 339
+ R Q+ +HP++
Sbjct: 259 NPSERLPLAQVSAHPWV 275
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 154 GQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
GQ+ + ++G LA LR Q + P ++ +++ HRD+KP N+
Sbjct: 107 GQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQI-GSALDAAHAAGATHRDVKPENI 165
Query: 214 LVNLKGRPKITDFGI-SAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
LV+ + DFGI SA + + VGT+ Y +PER +Y ADI+++ L
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVL 225
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR 327
+EC TG PY + V P PS R F + + K+ E R
Sbjct: 226 YECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIARGXAKNPEDR 280
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI FG++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L PSP P+ + + P++
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 20/263 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEK--EKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG V + ++ ++A+K I EK E + + R+L + +V F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR----HPNIVRFKE 82
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
P ++I +EY GG L + + E F++L+ G+SY H ++ + HR
Sbjct: 83 VILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ-VCHR 139
Query: 207 DIKPANLLVNLKGRP--KITDFGISAGLENSI--AMCATFVGTVTYMSPERIRNESYS-Y 261
D+K N L++ P KI FG S ++S+ + + VGT Y++PE + + Y
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYS---KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNL---MLQILEDPSPSPSRQNFSPEFCSFVDD 318
AD+WS G+ L+ G +P+ E P N + +IL P + SPE +
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 319 CLKKDAEARPTADQLLSHPFITK 341
D R + ++ +H + K
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLK 279
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 34/283 (12%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA + VQ +++ T + A+K I R+++ E+ L + + ++E
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
F D + + E M GGS+ + ++ E S + + + L +LH + + HRD
Sbjct: 80 FEEED--RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN-KGIAHRD 136
Query: 208 IKPANLLV---NLKGRPKITDFGISAGLE-------NSIAMCATFVGTVTYMSPERIRNE 257
+KP N+L N KI DFG+ +G++ S T G+ YM+PE +
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 258 S-----YSYPADIWSIGLALFECGTGEFPYAASEGP-------------VNLMLQILEDP 299
S Y D+WS+G+ L+ +G P+ G N++ + +++
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 300 SPSPSRQNFSPEFCS---FVDDCLKKDAEARPTADQLLSHPFI 339
++++ C+ + L +DA+ R +A Q+L HP++
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 90 GSGASSVVQRAVHIPTHRIIALKK----INIFEKEKRNQLLTEIRTLCEAPC-NEGLVEF 144
G G VV + + +A+KK ++I +E + Q EI+ A C +E LVE
Sbjct: 31 GEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKV--XAKCQHENLVEL 86
Query: 145 HGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQG----LSYLHGV 200
G + D + + Y GSL D L P P+ K+ QG +++LH
Sbjct: 87 LG--FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-PLSWHXRCKIAQGAANGINFLHEN 143
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNES 258
H +HRDIK AN+L++ KI+DFG++ E + VGT Y +PE +R E
Sbjct: 144 HH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE- 201
Query: 259 YSYPADIWSIGLALFECGTG 278
+ +DI+S G+ L E TG
Sbjct: 202 ITPKSDIYSFGVVLLEIITG 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 79 ASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
A+H++R+ G G+ V R T A+KK+ + E + +L+ C +
Sbjct: 95 ATHQLRL----GRGSFGEVHRMEDKQTGFQCAVKKVRL-EVFRAEELMA-----CAGLTS 144
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLH 198
+V +GA + ++I +E ++GGSL +++ Q +PE + L+GL YLH
Sbjct: 145 PRIVPLYGAVR--EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLH 202
Query: 199 GVRHLVHRDIKPANLLVNLKG-RPKITDFGISA-----GLENSIAMCATFVGTVTYMSPE 252
R ++H D+K N+L++ G + DFG + GL S+ GT T+M+PE
Sbjct: 203 S-RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPE 261
Query: 253 RIRNESYSYPADIWSIGLALFECGTGEFPYAA-SEGPVNLMLQILEDPSP----SPSRQN 307
+ S D+WS + G P+ GP L L+I +P P PS
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP--LCLKIASEPPPVREIPPS--- 316
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQL 333
+P + + L+K+ R +A +L
Sbjct: 317 CAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 89 IGSGASS-VVQRAVHIPTHR--IIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
IGSG S V + +P R +A+K + + + +R L+E + + + ++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD-HPNIIRL 115
Query: 145 HGAFYMPDSGQIS-IALEYMDGGSLADILRM---QKSIPEPILSSMFKKLLQGLSYLHGV 200
G G+++ I EYM+ GSL LR Q +I + L M + + G+ YL +
Sbjct: 116 EGVV---TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ--LVGMLRGVGAGMRYLSDL 170
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRNE 257
+ VHRD+ N+LV+ K++DFG+S LE+ T G + + +PE I
Sbjct: 171 GY-VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 258 SYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
++S +D+WS G+ ++E GE PY ++ +E+ P+ +
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVEEGYRLPAPMGCPHALHQLM 287
Query: 317 DDCLKKDAEARPTADQLLS 335
DC KD RP Q++S
Sbjct: 288 LDCWHKDRAQRPRFSQIVS 306
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI D G++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 6/223 (2%)
Query: 67 DESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIA---LKKINIFEKEKRN 123
D S R + +G G+ V A T + A LKK + + +
Sbjct: 5 DRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVE 64
Query: 124 QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPIL 183
+ E R L L + H F D ++ +EY++GG L ++ EP
Sbjct: 65 CTMVEKRVLALLDKPPFLTQLHSCFQTVD--RLYFVMEYVNGGDLMYHIQQVGKFKEPQA 122
Query: 184 SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFV 243
++ GL +LH R +++RD+K N++++ +G KI DFG+ F
Sbjct: 123 VFYAAEISIGLFFLHK-RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC 181
Query: 244 GTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASE 286
GT Y++PE I + Y D W+ G+ L+E G+ P+ +
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 224
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 30/287 (10%)
Query: 74 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQL--LTEIRT 131
K R + I IG GA S V T ++ A+K +N ++ KR ++ E R
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 132 LCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKL 190
+ + + H AF D + + +EY GG L +L + + IP + ++
Sbjct: 114 VLVNGDRRWITQLHFAF--QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEI 171
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYM 249
+ + +H + + VHRDIKP N+L++ G ++ DFG L + VGT Y+
Sbjct: 172 VMAIDSVHRLGY-VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYL 230
Query: 250 SPERIRNESYSY-------PADIWSIGLALFECGTGEFPY-----AASEGPV-----NLM 292
SPE ++ D W++G+ +E G+ P+ A + G + +L
Sbjct: 231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS 290
Query: 293 LQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
L ++++ P +R C + R A +HPF
Sbjct: 291 LPLVDEGVPEEARDFIQRLLCP------PETRLGRGGAGDFRTHPFF 331
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ +++ P L M ++ G++Y+ + + +HRD++ AN+
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHRDLRSANI 136
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV KI DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 137 LVGNGLICKIADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L E T G PY +L+ +E P Q+ + C KKD E RPT
Sbjct: 195 LLTELVTKGRVPYPGMNN--REVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPT 252
Query: 330 ADQLLSHPFITKY 342
+ L S F+ Y
Sbjct: 253 FEYLQS--FLEDY 263
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +KD
Sbjct: 204 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKDP 256
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 257 EERPTFEYL 265
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI D G++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 87
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 88 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 144
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + +V T Y +PE + N + Y+
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL P
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLS 264
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 265 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 314
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 87 IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +KD
Sbjct: 204 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKDP 256
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 257 EERPTFEYL 265
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +KD
Sbjct: 204 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKDP 256
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 257 EERPTFEYL 265
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 78 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 136
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 137 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +KD
Sbjct: 195 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKDP 247
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 248 EERPTFEYL 256
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 29/266 (10%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFH 145
+G G + H T ++ +K++ F++E + L E++ + E P +++F
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHP---NVLKFI 73
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
G Y +++ EY+ GG+L I++ M P S K + G++YLH + +++
Sbjct: 74 GVLY--KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM-NII 130
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA--------------TFVGTVTYMS 250
HRD+ N LV + DFG++ + + T VG +M+
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 251 PERIRNESYSYPADIWSIGLALFEC---GTGEFPYAASEGPVNLMLQILEDPSPSPSRQN 307
PE I SY D++S G+ L E + Y L ++ D P N
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPP---N 247
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQL 333
P F C D E RP+ +L
Sbjct: 248 CPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 76 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 134
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 135 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 192
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILED-------PSPSPSRQNFSPEFCSFVDDCLKK 322
L E T G PY G VN ++L+ P P ++ C C +K
Sbjct: 193 LLTELTTKGRVPYP---GMVN--REVLDQVERGYRMPCPPECPESLHDLMCQ----CWRK 243
Query: 323 DAEARPTADQL 333
D E RPT + L
Sbjct: 244 DPEERPTFEYL 254
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+K++ +++ EI+ L +A +
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHS 67
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKLLQGLSYL 197
+ +V++ G Y P ++ + +EY+ G L D L R + + L ++ +G+ YL
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G R VHRD+ N+LV + KI DFG++ L ++ + + + +PE +
Sbjct: 128 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+ +S +D+WS G+ L+E T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 149
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M FV T Y +PE I Y
Sbjct: 150 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-VPFVVTRYYRAPEVILGMGYKENV 208
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L P P P+ + + P++
Sbjct: 209 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 268
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 269 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 326
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A T +A+KK++ I ++ + L ++ + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + + + + M G L +I++ QK + + + + ++L+GL Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-DI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+NL VN KI D G++ ++ + +V T Y +PE + N Y+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLARHTDDEM---TGYVATRWYRAPEIMLNWMHYNQT 203
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP-------SPSRQNF----- 308
DIWS+G + E TG FP + L+L+++ P S S +N+
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT 263
Query: 309 --------------SPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
+P ++ L D++ R TA Q L+H + +Y
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDI 208
Y D +I + LE+ G L L+ E ++ ++L L Y H R ++HRDI
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE-RKVIHRDI 140
Query: 209 KPANLLVNLKGRPKITDFG--ISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
KP NLL+ KG KI DFG + A MC GT+ Y+ PE I +++ D+W
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLW 196
Query: 267 SIGLALFECGTGEFPY 282
G+ +E G P+
Sbjct: 197 CAGVLCYEFLVGMPPF 212
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 89 IGSGASS-VVQRAVHIPTHR--IIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEF 144
IGSG S V + +P R +A+K + + + +R L+E + + + ++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD-HPNIIRL 115
Query: 145 HGAFYMPDSGQIS-IALEYMDGGSLADILRM---QKSIPEPILSSMFKKLLQGLSYLHGV 200
G G+++ I EYM+ GSL LR Q +I + L M + + G+ YL +
Sbjct: 116 EGVV---TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ--LVGMLRGVGAGMRYLSDL 170
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRNE 257
+ VHRD+ N+LV+ K++DFG+S LE+ T G + + +PE I
Sbjct: 171 GY-VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 258 SYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
++S +D+WS G+ ++E GE PY ++ +E+ P+ +
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVEEGYRLPAPMGCPHALHQLM 287
Query: 317 DDCLKKDAEARPTADQLLS 335
DC KD RP Q++S
Sbjct: 288 LDCWHKDRAQRPRFSQIVS 306
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDI 208
Y D +I + LE+ G L L+ E ++ ++L L Y H R ++HRDI
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE-RKVIHRDI 140
Query: 209 KPANLLVNLKGRPKITDFG--ISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
KP NLL+ KG KI DFG + A MC GT+ Y+ PE I +++ D+W
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLW 196
Query: 267 SIGLALFECGTGEFPY 282
G+ +E G P+
Sbjct: 197 CAGVLCYEFLVGMPPF 212
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 254 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 312
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG+ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 313 LVGENLVCKVADFGLGRLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +KD
Sbjct: 371 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKDP 423
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 424 EERPTFEYL 432
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV-HRDIKPANLLVN 216
+ +EY+ GG L D + + E +F+++L + Y H RH+V HRD+KP N+L++
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH--RHMVVHRDLKPENVLLD 145
Query: 217 LKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP-ADIWSIGLALFEC 275
KI DFG+S + + G+ Y +PE I Y+ P DIWS G+ L+
Sbjct: 146 AHMNAKIADFGLSNMMSDG-EFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
Query: 276 GTGEFPYAASEGP 288
G P+ P
Sbjct: 205 LCGTLPFDDEHVP 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDI 208
Y D +I + LE+ G L L+ E ++ ++L L Y H R ++HRDI
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE-RKVIHRDI 141
Query: 209 KPANLLVNLKGRPKITDFG--ISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
KP NLL+ KG KI DFG + A MC GT+ Y+ PE I +++ D+W
Sbjct: 142 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLW 197
Query: 267 SIGLALFECGTGEFPY 282
G+ +E G P+
Sbjct: 198 CAGVLCYEFLVGMPPF 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 20/263 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEK--EKRNQLLTEIRTLCEAPCNEGLVEFHG 146
IGSG V + ++ ++A+K I EK E + + R+L + +V F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR----HPNIVRFKE 82
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHR 206
P ++I +EY GG L + + E F++L+ G+SY H ++ + HR
Sbjct: 83 VILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ-VCHR 139
Query: 207 DIKPANLLVNLKGRP--KITDFGISAGLENSI--AMCATFVGTVTYMSPERIRNESYS-Y 261
D+K N L++ P KI FG S ++S+ + VGT Y++PE + + Y
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYS---KSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGK 196
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNL---MLQILEDPSPSPSRQNFSPEFCSFVDD 318
AD+WS G+ L+ G +P+ E P N + +IL P + SPE +
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 319 CLKKDAEARPTADQLLSHPFITK 341
D R + ++ +H + K
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLK 279
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 73
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ + I L ++ +G+ YL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I +EYM G L D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 87 IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILED-------PSPSPSRQNFSPEFCSFVDDCLKK 322
L E T G PY G VN ++L+ P P ++ C C +K
Sbjct: 204 LLTELTTKGRVPYP---GMVN--REVLDQVERGYRMPCPPECPESLHDLMCQ----CWRK 254
Query: 323 DAEARPTADQL 333
D E RPT + L
Sbjct: 255 DPEERPTFEYL 265
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 93
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 150
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + V T Y +PE + N + Y+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGA 147
IG GA +V A +A+KKI+ FE + Q L EI+ L +E ++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HENIIGINDI 94
Query: 148 FYMPDSGQ---ISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLV 204
P Q + I + M+ L +L+ Q + I +++ +L+GL Y+H +++
Sbjct: 95 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSA-NVL 151
Query: 205 HRDIKPANLLVNLKGRPKITDFGISAGLE---NSIAMCATFVGTVTYMSPERIRN-ESYS 260
HRD+KP+NLL+N KI DFG++ + + V T Y +PE + N + Y+
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 261 YPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------------ 300
DIWS+G L E + FP +N +L IL PS
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 271
Query: 301 -PSPSRQNFSPEF-------CSFVDDCLKKDAEARPTADQLLSHPFITKY 342
P ++ ++ F +D L + R +Q L+HP++ +Y
Sbjct: 272 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV-TRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFE--CGTGEFPYAASEGPVNLMLQILEDPSPS------PSRQNF---SPEF 312
DIWS+G + E C FP N +++ L P P+ P+ +N+ P++
Sbjct: 207 DIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 71
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +EY+ GSL D L+ K + I L ++ +G+ YL
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HR++ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPCNEG 140
+I +G G+ V+ A H T + +ALK IN + + + + ++ EI L +
Sbjct: 17 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPH 75
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+++ + D +I + +EY G L D + + + E F++++ + Y H
Sbjct: 76 IIKLYDVIKSKD--EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH-- 130
Query: 201 RH-LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
RH +VHRD+KP NLL++ KI DFG+S + + T G+ Y +PE I + Y
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLY 189
Query: 260 SYP-ADIWSIGLALFECGTGEFPYAASEGPV 289
+ P D+WS G+ L+ P+ PV
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDESIPV 220
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+K++ +++ EI+ L +A +
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHS 70
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKLLQGLSYL 197
+ +V++ G Y P + + +EY+ G L D L R + + L ++ +G+ YL
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G R VHRD+ N+LV + KI DFG++ L ++ + + + +PE +
Sbjct: 131 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+ +S +D+WS G+ L+E T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPCNEG 140
+I +G G+ V+ A H T + +ALK IN + + + + ++ EI L +
Sbjct: 7 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPH 65
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+++ + D +I + +EY G L D + + + E F++++ + Y H
Sbjct: 66 IIKLYDVIKSKD--EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH-- 120
Query: 201 RH-LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
RH +VHRD+KP NLL++ KI DFG+S + + T G+ Y +PE I + Y
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLY 179
Query: 260 SYP-ADIWSIGLALFECGTGEFPYAASEGPV 289
+ P D+WS G+ L+ P+ PV
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDDESIPV 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPCNEG 140
+I +G G+ V+ A H T + +ALK IN + + + + ++ EI L +
Sbjct: 16 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPH 74
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+++ + D +I + +EY G L D + + + E F++++ + Y H
Sbjct: 75 IIKLYDVIKSKD--EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH-- 129
Query: 201 RH-LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
RH +VHRD+KP NLL++ KI DFG+S + + T G+ Y +PE I + Y
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLY 188
Query: 260 SYP-ADIWSIGLALFECGTGEFPYAASEGPV 289
+ P D+WS G+ L+ P+ PV
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPV 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 58/312 (18%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPC-- 137
S + ++ +G GA VV A H PT I+A+KKI F+K L +RTL E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP-----LFALRTLREIKILK 64
Query: 138 ---NEGLVEFHGAFYMPDS----GQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKL 190
+E ++ PDS ++ I E M L ++ Q + I +++ L
Sbjct: 65 HFKHENIITIFN-IQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTL 122
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA----------MCA 240
+ + LHG +++HRD+KP+NLL+N K+ DFG++ ++ S A
Sbjct: 123 -RAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 241 TFVGTVTYMSPE-RIRNESYSYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILE 297
FV T Y +PE + + YS D+WS G L E FP + L+ I+
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 298 DP----------SP--------------SPSRQNF---SPEFCSFVDDCLKKDAEARPTA 330
P SP +P + F +P+ + L D R TA
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 331 DQLLSHPFITKY 342
+ L HP++ Y
Sbjct: 301 KEALEHPYLQTY 312
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+K++ +++ EI+ L +A +
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHS 71
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKLLQGLSYL 197
+ +V++ G Y P + + +EY+ G L D L R + + L ++ +G+ YL
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G R VHRD+ N+LV + KI DFG++ L ++ + + + +PE +
Sbjct: 132 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+ +S +D+WS G+ L+E T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKIN---IFEKEKRNQLLTEIRTLCEAPCNEG 140
+I +G G+ V+ A H T + +ALK IN + + + + ++ EI L +
Sbjct: 11 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPH 69
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
+++ + D +I + +EY G L D + + + E F++++ + Y H
Sbjct: 70 IIKLYDVIKSKD--EIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH-- 124
Query: 201 RH-LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
RH +VHRD+KP NLL++ KI DFG+S + + T G+ Y +PE I + Y
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLY 183
Query: 260 SYP-ADIWSIGLALFECGTGEFPYAASEGPV 289
+ P D+WS G+ L+ P+ PV
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDDESIPV 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+K++ +++ EI+ L +A +
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHS 83
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKLLQGLSYL 197
+ +V++ G Y P + + +EY+ G L D L R + + L ++ +G+ YL
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G R VHRD+ N+LV + KI DFG++ L ++ + + + +PE +
Sbjct: 144 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+ +S +D+WS G+ L+E T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + +EY G+L + LR ++ +PE ++
Sbjct: 103 IINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV KI DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + +EY G+L + LR ++ +PE ++
Sbjct: 103 IINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV KI DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + +EY G+L + LR ++ +PE ++
Sbjct: 103 IIHLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV KI DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 21/297 (7%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 126
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 127 LY---AGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI-NI 182
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + ++ T T Y++PE + E Y
Sbjct: 183 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSL-TTPCYTPYYVAPEVLGPEKY 240
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D WS+G+ + G P+ ++ G ++ + P+P S E
Sbjct: 241 DKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKX 300
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMKDLADVST 371
+ + LK + R T + +HP+I + R + + +R +D+ + T
Sbjct: 301 LIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLKEDKERWEDVKEEXT 357
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 119 KEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-- 176
+E + L++E+ + ++ ++ GA G + + +EY G+L + LR ++
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 177 ---------SIPEPILS-----SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPK 222
+PE ++ S +L +G+ YL + +HRD+ N+LV K
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMK 197
Query: 223 ITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GE 279
I DFG++ + N T G V +M+PE + + Y++ +D+WS G+ ++E T G
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 280 FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
PY PV + ++L++ N + E + DC RPT QL+
Sbjct: 258 SPYPGI--PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 148
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 207
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L P P P+ + + P++
Sbjct: 208 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 267
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 268 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L P P P+ + + P++
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 29/266 (10%)
Query: 79 ASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
A+H++R+ G G+ V R T A+KK+ + E + +L+ C +
Sbjct: 76 ATHQLRL----GRGSFGEVHRMEDKQTGFQCAVKKVRL-EVFRAEELMA-----CAGLTS 125
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLH 198
+V +GA + ++I +E ++GGSL +++ Q +PE + L+GL YLH
Sbjct: 126 PRIVPLYGAVR--EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLH 183
Query: 199 GVRHLVHRDIKPANLLVNLKG-RPKITDFGISA-----GLENSIAMCATFVGTVTYMSPE 252
R ++H D+K N+L++ G + DFG + GL + GT T+M+PE
Sbjct: 184 S-RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 253 RIRNESYSYPADIWSIGLALFECGTGEFPYAA-SEGPVNLMLQILEDPSP----SPSRQN 307
+ S D+WS + G P+ GP L L+I +P P PS
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP--LCLKIASEPPPVREIPPS--- 297
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQL 333
+P + + L+K+ R +A +L
Sbjct: 298 CAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + +EY G+L + LR ++ +PE ++
Sbjct: 103 IITLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV KI DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + +EY G+L + LR ++ +PE ++
Sbjct: 103 IINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV KI DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ M K + P L M ++ G++Y+ + + VHRD+ AN+
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLAAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILED-------PSPSPSRQNFSPEFCSFVDDCLKK 322
L E T G PY G VN ++L+ P P ++ C C +K
Sbjct: 204 LLTELTTKGRVPYP---GMVN--REVLDQVERGYRMPCPPECPESLHDLMCQ----CWRK 254
Query: 323 DAEARPTADQL 333
D E RPT + L
Sbjct: 255 DPEERPTFEYL 265
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 154 GQISIALEYMDGGSLADILRMQK-----------SIPEPILS-----SMFKKLLQGLSYL 197
G + + +EY G+L + LR ++ +PE ++ S +L +G+ YL
Sbjct: 106 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 165
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIR 255
+ +HRD+ N+LV KI DFG++ + N T G V +M+PE +
Sbjct: 166 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 224
Query: 256 NESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS 314
+ Y++ +D+WS G+ ++E T G PY PV + ++L++ N + E
Sbjct: 225 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHRMDKPANCTNELYM 282
Query: 315 FVDDCLKKDAEARPTADQLLS 335
+ DC RPT QL+
Sbjct: 283 MMRDCWHAVPSQRPTFKQLVE 303
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 17/228 (7%)
Query: 117 FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK 176
+ + +R + L+E + + + ++ G + +S + I E+M+ G+L LR+
Sbjct: 54 YTERQRREFLSEASIMGQFE-HPNIIRLEGV--VTNSMPVMILTEFMENGALDSFLRLND 110
Query: 177 SIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
I L M + + G+ YL + + VHRD+ N+LVN K++DFG+S LE +
Sbjct: 111 GQFTVIQLVGMLRGIASGMRYLAEMSY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 169
Query: 236 IA---MCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY--AASEG 287
+ ++ G + + +PE I ++ +D WS G+ ++E + GE PY +++
Sbjct: 170 SSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
Query: 288 PVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
+N + Q P P + + DC +KD ARP Q++S
Sbjct: 230 VINAIEQDYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVS 273
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 154 GQISIALEYMDGGSLADILRMQK-----------SIPEPILS-----SMFKKLLQGLSYL 197
G + + +EY G+L + LR ++ +PE ++ S +L +G+ YL
Sbjct: 101 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 160
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIR 255
+ +HRD+ N+LV KI DFG++ + N T G V +M+PE +
Sbjct: 161 -ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 219
Query: 256 NESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS 314
+ Y++ +D+WS G+ ++E T G PY PV + ++L++ N + E
Sbjct: 220 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHRMDKPANCTNELYM 277
Query: 315 FVDDCLKKDAEARPTADQLLS 335
+ DC RPT QL+
Sbjct: 278 MMRDCWHAVPSQRPTFKQLVE 298
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 154 GQISIALEYMDGGSLADILRMQK-----------SIPEPILS-----SMFKKLLQGLSYL 197
G + + +EY G+L + LR ++ +PE ++ S +L +G+ YL
Sbjct: 103 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 162
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIR 255
+ +HRD+ N+LV KI DFG++ + N T G V +M+PE +
Sbjct: 163 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 221
Query: 256 NESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS 314
+ Y++ +D+WS G+ ++E T G PY PV + ++L++ N + E
Sbjct: 222 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHRMDKPANCTNELYM 279
Query: 315 FVDDCLKKDAEARPTADQLL 334
+ DC RPT QL+
Sbjct: 280 MMRDCWHAVPSQRPTFKQLV 299
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM G L D L+ M K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 87 IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 145
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +KD
Sbjct: 204 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKDP 256
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 257 EERPTFEYL 265
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
+G G VV +A RI+ALK+I + + E T IR +L + + +V
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRL-DAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLVH 205
+ +++ E+M+ L +L K+ + + + +LL+G+++ H R ++H
Sbjct: 87 VIHSERC--LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILH 142
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR-NESYSYPAD 264
RD+KP NLL+N G K+ DFG++ + V T+ Y +P+ + ++ YS D
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 265 IWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSPS--PSRQNFS----------- 309
IWSIG E TG+ FP + + + IL P+P P Q
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE 262
Query: 310 --------PEFCS----FVDDCLKKDAEARPTADQLLSHPF 338
P FC + + L D R +A ++HP+
Sbjct: 263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 21/266 (7%)
Query: 83 MRIFGAIGSGA-SSVVQRAVHIPTHR--IIALKKINI-FEKEKRNQLLTEIRTLCEAPCN 138
++I IG+G V + +P R +A+K + + +++R L+E + + +
Sbjct: 9 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-H 67
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
++ G + S + I E+M+ GSL LR I L M + + G+ YL
Sbjct: 68 PNVIHLEGV--VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA---MCATFVGT--VTYMSPE 252
+ + VHR + N+LVN K++DFG+S LE+ + + G + + +PE
Sbjct: 126 ADMNY-VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPY--AASEGPVNLMLQILEDPSPSPSRQNFS 309
I+ ++ +D+WS G+ ++E + GE PY ++ +N + Q P P +
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP----MDCP 240
Query: 310 PEFCSFVDDCLKKDAEARPTADQLLS 335
+ DC +KD RP Q+++
Sbjct: 241 SALHQLMLDCWQKDRNHRPKFGQIVN 266
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + +EY G+L + LR ++ +PE ++
Sbjct: 103 IINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV +I DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 83 MRIFGAIGSGASSVVQRAVHIP----THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCN 138
++ +G G V+ + P T ++A+KK+ +E EI L ++ +
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-KSLQH 73
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
+ +V++ G Y + + +E++ GSL + L+ K + I L ++ +G+ YL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
G + +HRD+ N+LV + R KI DFG++ L + + + + +PE +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 255 RNESYSYPADIWSIGLALFECGT 277
+S +D+WS G+ L+E T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVEFHG 146
+G G VV +A RI+ALK+I + + E T IR +L + + +V
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRL-DAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLVH 205
+ +++ E+M+ L +L K+ + + + +LL+G+++ H R ++H
Sbjct: 87 VIHSERC--LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILH 142
Query: 206 RDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIR-NESYSYPAD 264
RD+KP NLL+N G K+ DFG++ + V T+ Y +P+ + ++ YS D
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 265 IWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSPS--PSRQNFS----------- 309
IWSIG E TG+ FP + + + IL P+P P Q
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE 262
Query: 310 --------PEFCS----FVDDCLKKDAEARPTADQLLSHPF 338
P FC + + L D R +A ++HP+
Sbjct: 263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 154 GQISIALEYMDGGSLADILRMQK-----------SIPEPILS-----SMFKKLLQGLSYL 197
G + + +EY G+L + LR ++ +PE ++ S +L +G+ YL
Sbjct: 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 219
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIR 255
+ +HRD+ N+LV KI DFG++ + N T G V +M+PE +
Sbjct: 220 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 278
Query: 256 NESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS 314
+ Y++ +D+WS G+ ++E T G PY PV + ++L++ N + E
Sbjct: 279 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHRMDKPANCTNELYM 336
Query: 315 FVDDCLKKDAEARPTADQLL 334
+ DC RPT QL+
Sbjct: 337 MMRDCWHAVPSQRPTFKQLV 356
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLH 198
LV+ G + + G + I EYM GSL D LR + + L + + + YL
Sbjct: 248 LVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 199 GVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES 258
G + VHRD+ N+LV+ K++DFG++ + + + T V + +PE +R +
Sbjct: 307 G-NNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKK 362
Query: 259 YSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
+S +D+WS G+ L+E + G PY P+ ++ +E + P +
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDAPDGCPPAVYDVMK 420
Query: 318 DCLKKDAEARPTADQL 333
+C DA RPT QL
Sbjct: 421 NCWHLDAATRPTFLQL 436
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 131/312 (41%), Gaps = 58/312 (18%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPC-- 137
S + ++ +G GA VV A H PT I+A+KKI F+K L +RTL E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP-----LFALRTLREIKILK 64
Query: 138 ---NEGLVEFHGAFYMPDS----GQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKL 190
+E ++ PDS ++ I E M L ++ Q + I +++ L
Sbjct: 65 HFKHENIITIFN-IQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTL 122
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA----------MCA 240
+ + LHG +++HRD+KP+NLL+N K+ DFG++ ++ S A
Sbjct: 123 -RAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 241 TFVGTVTYMSPE-RIRNESYSYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILE 297
+V T Y +PE + + YS D+WS G L E FP + L+ I+
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 298 DP----------SP--------------SPSRQNF---SPEFCSFVDDCLKKDAEARPTA 330
P SP +P + F +P+ + L D R TA
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 331 DQLLSHPFITKY 342
+ L HP++ Y
Sbjct: 301 KEALEHPYLQTY 312
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 17/228 (7%)
Query: 117 FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK 176
+ + +R + L+E + + + ++ G + +S + I E+M+ G+L LR+
Sbjct: 56 YTERQRREFLSEASIMGQFE-HPNIIRLEGV--VTNSMPVMILTEFMENGALDSFLRLND 112
Query: 177 SIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS 235
I L M + + G+ YL + + VHRD+ N+LVN K++DFG+S LE +
Sbjct: 113 GQFTVIQLVGMLRGIASGMRYLAEMSY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 171
Query: 236 IA---MCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY--AASEG 287
+ ++ G + + +PE I ++ +D WS G+ ++E + GE PY +++
Sbjct: 172 SSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 231
Query: 288 PVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
+N + Q P P + + DC +KD ARP Q++S
Sbjct: 232 VINAIEQDYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVS 275
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 77 NPHVCRLLGICL---TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 134 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 250
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 78 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 251
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 77 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 134 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 250
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 79 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 252
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 76 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 249
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 141
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 200
Query: 264 DIWSIGLALFE--CGTGEFPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
D+WS+G + E C FP N +++ L P P P+ + + P++
Sbjct: 201 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 260
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 261 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 318
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 153 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 211
Query: 264 DIWSIGLALFE--CGTGEFPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
D+WS+G + E C FP N +++ L P P P+ + + P++
Sbjct: 212 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 271
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 272 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 329
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 114/237 (48%), Gaps = 33/237 (13%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G GA V +A + R A+KKI E EK + +L+E+ L + ++ +V ++
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEV-MLLASLNHQYVVRYY 68
Query: 146 GAFY-----------MPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQG 193
A+ + + I +EY + G+L D++ + + +F+++L+
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAM--------------C 239
LSY+H + ++HRD+KP N+ ++ KI DFG++ + S+ +
Sbjct: 129 LSYIHS-QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 240 ATFVGTVTYMSPERIRNES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
+ +GT Y++ E + Y+ D++S+G+ FE +P++ VN++ ++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL 241
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 80 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 137 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 253
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 254 MIMVKCWMIDADSRPKFRELI 274
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 34/283 (12%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G GA + VQ +++ T + A+K I R+++ E+ L + + ++E
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 148 FYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRD 207
F D + + E M GGS+ + ++ E S + + + L +LH + + HRD
Sbjct: 80 FEEED--RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN-KGIAHRD 136
Query: 208 IKPANLLV---NLKGRPKITDFGISAGLE-------NSIAMCATFVGTVTYMSPERIRNE 257
+KP N+L N KI DF + +G++ S T G+ YM+PE +
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 258 S-----YSYPADIWSIGLALFECGTGEFPYAASEGP-------------VNLMLQILEDP 299
S Y D+WS+G+ L+ +G P+ G N++ + +++
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 300 SPSPSRQNFSPEFCS---FVDDCLKKDAEARPTADQLLSHPFI 339
++++ C+ + L +DA+ R +A Q+L HP++
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK-------RNQLLTEIRTLCEAPCNEGL 141
IG GA V +A + +ALK + + E+ R L E P L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSS-----MFKKLLQGLSY 196
++ ++++ E++D D+ P P L + + ++ L+GL +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
LH +VHRD+KP N+LV G K+ DFG++ +A+ A V T+ Y +PE +
Sbjct: 128 LHA-NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-APVVVTLWYRAPEVLLQ 185
Query: 257 ESYSYPADIWSIGLALFE--------CGTGE 279
+Y+ P D+WS+G E CG E
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I EYM+ GSL LR I L M + + G+ YL + + VHRD+ N+L
Sbjct: 90 VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY-VHRDLAARNIL 148
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLA 271
VN K++DFG+S LE+ T G + + +PE I ++ +D+WS G+
Sbjct: 149 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 208
Query: 272 LFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTA 330
++E + GE PY +++ +E+ P + + DC +K+ RP
Sbjct: 209 MWEVMSYGERPYWDMSN--QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 266
Query: 331 DQLLS 335
Q+++
Sbjct: 267 GQIVN 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 83 MRIFGAIGSGA-SSVVQRAVHIPTHR--IIALKKINI-FEKEKRNQLLTEIRTLCEAPCN 138
++I IG G V + +P R +A+K + + ++R L+E + + +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-H 68
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYL 197
++ G + + I EYM+ GSL LR I L M + + G+ YL
Sbjct: 69 PNIIHLEGV--VTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERI 254
+ + VHRD+ N+LVN K++DFG+S LE+ T G + + +PE I
Sbjct: 127 SDMSY-VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
++ +D+WS G+ ++E + GE PY +++ +E+ P +
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVIKAIEEGYRLPPPMDCPIALH 243
Query: 314 SFVDDCLKKDAEARPTADQLLS 335
+ DC +K+ RP Q+++
Sbjct: 244 QLMLDCWQKERSDRPKFGQIVN 265
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV-TRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G FP N +++ L P P P+ + + P++
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 158 IALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E M+GG L + R ++ E + + + + + +LH ++ HRD+KP NLL
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLY 161
Query: 216 NLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K + K+TDFG + E + T T Y++PE + E Y D+WS+G+ +
Sbjct: 162 TSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
Query: 273 FECGTGEFPYAASEGP-----VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR 327
+ G P+ ++ G + +++ + P+P S + + LK D R
Sbjct: 220 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 279
Query: 328 PTADQLLSHPFITK 341
T Q ++HP+I +
Sbjct: 280 LTITQFMNHPWINQ 293
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 23/198 (11%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY-VHRDLRAANI 142
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 143 LVGENLVCKVADFGLARLIEDNEWTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +K+
Sbjct: 201 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKEP 253
Query: 325 EARPTADQLLSHPFITKY 342
E RPT + L F+ Y
Sbjct: 254 EERPTFEYL--QAFLEDY 269
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 158 IALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E M+GG L + R ++ E + + + + + +LH ++ HRD+KP NLL
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLY 142
Query: 216 NLKGRP---KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K + K+TDFG + E + T T Y++PE + E Y D+WS+G+ +
Sbjct: 143 TSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
Query: 273 FECGTGEFPYAASEGP-----VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEAR 327
+ G P+ ++ G + +++ + P+P S + + LK D R
Sbjct: 201 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 260
Query: 328 PTADQLLSHPFITK 341
T Q ++HP+I +
Sbjct: 261 LTITQFMNHPWINQ 274
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM+ GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 84 IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY-VHRDLRAANI 142
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 143 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +K+
Sbjct: 201 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKEP 253
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 254 EERPTFEYL 262
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 311
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +K+
Sbjct: 370 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMC----QCWRKEP 422
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 423 EERPTFEYL 431
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 79 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 252
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 253 MIMRKCWMIDADSRPKFRELI 273
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 311
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +K+
Sbjct: 370 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMC----QCWRKEP 422
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 423 EERPTFEYL 431
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 76 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 249
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 250 MIMRKCWMIDADSRPKFRELI 270
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 77 IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 135
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 136 LVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 193
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +K+
Sbjct: 194 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMCQ----CWRKEP 246
Query: 325 EARPTADQLLSHPFITKY 342
E RPT + L F+ Y
Sbjct: 247 EERPTFEYL--QAFLEDY 262
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 207 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 252
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 253 QPTVRNYVENRP 264
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 207 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 252
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 253 QPTVRNYVENRP 264
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 86 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 143 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 259
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 260 MIMRKCWMIDADSRPKFRELI 280
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDA-NLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA-GI 140
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 199
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 200 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 245
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 246 QPTVRNYVENRP 257
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+E ++++ G + + + +EY+ GSL D L + SI L +++ +G++YL
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYL 150
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
H +H +HRD+ N+L++ KI DFG++ + + V + +PE +
Sbjct: 151 HA-QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 255 RNESYSYPADIWSIGLALFE----CGTGEFP---------YAASEGPVNLMLQILEDPSP 301
+ + Y +D+WS G+ L+E C + + P A + V + ++LE
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
P E + +C + +A RPT + L+
Sbjct: 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 89 IGSGASSVVQRAVHIPTHR---IIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G+ V A T++ I ALKK + + + E R L A + L
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMF--KKLLQGLSYLHGVRHL 203
F ++ + +EY++GG L + +Q + + F +++ GL +LH + +
Sbjct: 86 CTFQTKEN--LFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHS-KGI 140
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCAT--FVGTVTYMSPERIRNESYSY 261
V+RD+K N+L++ G KI DFG+ EN + T F GT Y++PE + + Y++
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQKYNH 198
Query: 262 PADIWSIGLALFECGTGEFPYAASE 286
D WS G+ L+E G+ P+ +
Sbjct: 199 SVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + + Y G+L + LR ++ +PE ++
Sbjct: 103 IINLLGA--CTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV KI DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK-------RNQLLTEIRTLCEAPCNEGL 141
IG GA V +A + +ALK + + E+ R L E P L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSS-----MFKKLLQGLSY 196
++ ++++ E++D D+ P P L + + ++ L+GL +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
LH +VHRD+KP N+LV G K+ DFG++ +A+ V T+ Y +PE +
Sbjct: 128 LHA-NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRAPEVLLQ 185
Query: 257 ESYSYPADIWSIGLALFE--------CGTGE 279
+Y+ P D+WS+G E CG E
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 89 IGSGASSVVQRAVHIPTHR---IIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G G+ V A T++ I ALKK + + + E R L A + L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 146 GAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMF--KKLLQGLSYLHGVRHL 203
F ++ + +EY++GG L + +Q + + F +++ GL +LH + +
Sbjct: 85 CTFQTKEN--LFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHS-KGI 139
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCAT--FVGTVTYMSPERIRNESYSY 261
V+RD+K N+L++ G KI DFG+ EN + T F GT Y++PE + + Y++
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQKYNH 197
Query: 262 PADIWSIGLALFECGTGEFPYAASE 286
D WS G+ L+E G+ P+ +
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 78 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 251
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 101 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 158 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 274
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 275 MIMVKCWMIDADSRPKFRELI 295
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 79 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 252
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 78 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG + G E + +M+ E I
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 251
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 252 MIMRKCWMIDADSRPKFRELI 272
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 79 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 252
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 73 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 130 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 246
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 247 MIMVKCWMIDADSRPKFRELI 267
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 23/173 (13%)
Query: 120 EKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIP 179
+K QLL +R ++ +++ Y + ++ + +EY + + M S+P
Sbjct: 54 KKEIQLLRRLR-------HKNVIQLVDVLYNEEKQKMYMVMEY----CVCGMQEMLDSVP 102
Query: 180 E---PILSS--MFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN 234
E P+ + F +L+ GL YLH + +VH+DIKP NLL+ G KI+ G++ L
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLHS-QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161
Query: 235 SIA--MCATFVGTVTYMSPERIRN--ESYS-YPADIWSIGLALFECGTGEFPY 282
A C T G+ + PE I N +++S + DIWS G+ L+ TG +P+
Sbjct: 162 FAADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 76 NPHVCRLLGICL---TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 249
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 70 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 127 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 243
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 244 MIMVKCWMIDADSRPKFRELI 264
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 76 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 249
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 80 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 138
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 139 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 196
Query: 271 ALFECGT-GEFPYAASEGPVNLMLQILED-------PSPSPSRQNFSPEFCSFVDDCLKK 322
L E T G PY G VN ++L+ P P ++ C C +K
Sbjct: 197 LLTELTTKGRVPYP---GMVN--REVLDQVERGYRMPCPPECPESLHDLMCQ----CWRK 247
Query: 323 DAEARPTADQL 333
+ E RPT + L
Sbjct: 248 EPEERPTFEYL 258
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 82 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 139 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 255
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 256 MIMVKCWMIDADSRPKFRELI 276
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLXQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP-YVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 207 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 252
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 253 QPTVRNYVENRP 264
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 83 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 256
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 32/274 (11%)
Query: 89 IGSGA--SSVVQRAVHIPTHR-----IIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEG 140
+G GA V+ AV I + +A+K + EK + L++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILS----- 184
++ GA G + + + Y G+L + LR ++ +PE ++
Sbjct: 103 IINLLGA--CTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 185 SMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVG 244
S +L +G+ YL + +HRD+ N+LV KI DFG++ + N T G
Sbjct: 161 SCTYQLARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 245 T--VTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSP 301
V +M+PE + + Y++ +D+WS G+ ++E T G PY PV + ++L++
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHR 277
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N + E + DC RPT QL+
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 178 IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA 237
+P + + ++ L+GL +LH +VHRD+KP N+LV G K+ DFG++ +A
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE--------CGTGE 279
+ V T+ Y +PE + +Y+ P D+WS+G E CG E
Sbjct: 176 LTPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 224
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 16/225 (7%)
Query: 76 YRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEA 135
YR H M +G G+ V R T A+KK+ + E C
Sbjct: 69 YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAG 122
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLS 195
+ +V +GA + ++I +E ++GGSL +++ +PE + L+GL
Sbjct: 123 LSSPRIVPLYGAVR--EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE 180
Query: 196 YLHGVRHLVHRDIKPANLLVNLKG-RPKITDFGISA-----GLENSIAMCATFVGTVTYM 249
YLH R ++H D+K N+L++ G R + DFG + GL S+ GT T+M
Sbjct: 181 YLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 239
Query: 250 SPERIRNESYSYPADIWSIGLALFECGTGEFPYAAS-EGPVNLML 293
+PE + + DIWS + G P+ GP+ L +
Sbjct: 240 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI 284
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 21/247 (8%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 185
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 244
Query: 264 DIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLK 321
DIWS+G + E + FP N +++ L P PEF + ++
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKLQPTVR 295
Query: 322 KDAEARP 328
E RP
Sbjct: 296 NYVENRP 302
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLH 198
LV+ G + + G + I EYM GSL D LR + + L + + + YL
Sbjct: 61 LVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 199 GVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES 258
G + VHRD+ N+LV+ K++DFG++ + + + T V + +PE +R +
Sbjct: 120 G-NNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKK 175
Query: 259 YSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
+S +D+WS G+ L+E + G PY P+ ++ +E + P +
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 233
Query: 318 DCLKKDAEARPTADQL 333
+C DA RP+ QL
Sbjct: 234 NCWHLDAAMRPSFLQL 249
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 207 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 252
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 253 QPTVRNYVENRP 264
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK-------RNQLLTEIRTLCEAPCNEGL 141
IG GA V +A + +ALK + + E+ R L E P L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP-----ILSSMFKKLLQGLSY 196
++ ++++ E++D D+ P P + + ++ L+GL +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN 256
LH +VHRD+KP N+LV G K+ DFG++ +A+ V T+ Y +PE +
Sbjct: 128 LHA-NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-TLWYRAPEVLLQ 185
Query: 257 ESYSYPADIWSIGLALFE--------CGTGE 279
+Y+ P D+WS+G E CG E
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 16/225 (7%)
Query: 76 YRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEA 135
YR H M +G G+ V R T A+KK+ + E C
Sbjct: 53 YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAG 106
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLS 195
+ +V +GA + ++I +E ++GGSL +++ +PE + L+GL
Sbjct: 107 LSSPRIVPLYGAVR--EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE 164
Query: 196 YLHGVRHLVHRDIKPANLLVNLKG-RPKITDFGISA-----GLENSIAMCATFVGTVTYM 249
YLH R ++H D+K N+L++ G R + DFG + GL S+ GT T+M
Sbjct: 165 YLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 223
Query: 250 SPERIRNESYSYPADIWSIGLALFECGTGEFPYAAS-EGPVNLML 293
+PE + + DIWS + G P+ GP+ L +
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 156 ISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I EYM+ GSL LR I L M + + G+ YL + VHRD+ N+L
Sbjct: 105 VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM-SAVHRDLAARNIL 163
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVG---TVTYMSPERIRNESYSYPADIWSIGLA 271
VN K++DFG+S LE+ T G + + +PE I ++ +D+WS G+
Sbjct: 164 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 223
Query: 272 LFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTA 330
++E + GE PY +++ +E+ P + + DC +K+ RP
Sbjct: 224 MWEVMSYGERPYWDMSN--QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 281
Query: 331 DQLLS 335
Q+++
Sbjct: 282 GQIVN 286
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
I EYM+ G+L LR + + L M + + G+ YL + + VHRD+ N+LVN
Sbjct: 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY-VHRDLAARNILVN 181
Query: 217 LKGRPKITDFGISAGLENSIAMCATFVG---TVTYMSPERIRNESYSYPADIWSIGLALF 273
K++DFG+S LE+ T G + + +PE I ++ +D+WS G+ ++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMW 241
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E T GE PY E + +++ + D P+ + + C +++ RP
Sbjct: 242 EVMTYGERPYW--ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD 299
Query: 333 LLS 335
++S
Sbjct: 300 IVS 302
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 253 IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 311
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +K+
Sbjct: 370 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMC----QCWRKEP 422
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 423 EERPTFEYL 431
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLH 198
LV+ G + + G + I EYM GSL D LR + + L + + + YL
Sbjct: 76 LVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 199 GVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES 258
G + VHRD+ N+LV+ K++DFG++ + + + T V + +PE +R +
Sbjct: 135 G-NNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKK 190
Query: 259 YSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
+S +D+WS G+ L+E + G PY P+ ++ +E + P +
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 248
Query: 318 DCLKKDAEARPTADQL 333
+C DA RP+ QL
Sbjct: 249 NCWHLDAAMRPSFLQL 264
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 156 ISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I I EYM GSL D L+ + K + P L M ++ G++Y+ + + VHRD++ AN+
Sbjct: 336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANI 394
Query: 214 LVNLKGRPKITDFGISAGLEN---SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
LV K+ DFG++ +E+ + A F + + +PE ++ +D+WS G+
Sbjct: 395 LVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 271 ALFECGT-GEFPYAASEGPVNL-MLQILED----PSPSPSRQNFSPEFCSFVDDCLKKDA 324
L E T G PY G VN +L +E P P ++ C C +K+
Sbjct: 453 LLTELTTKGRVPYP---GMVNREVLDQVERGYRMPCPPECPESLHDLMC----QCWRKEP 505
Query: 325 EARPTADQL 333
E RPT + L
Sbjct: 506 EERPTFEYL 514
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 19/238 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEK-----RNQLLTEIRTLCEA--PCNEGL 141
+G G + V +A T++I+A+KKI + + + L EI+ L E P GL
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI-LSSMFKKLLQGLSYLHGV 200
++ G IS+ ++M+ L I++ + P + + LQGL YLH
Sbjct: 78 LDAFG-----HKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ- 130
Query: 201 RHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRN-ESY 259
++HRD+KP NLL++ G K+ DFG++ + V T Y +PE + Y
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
D+W++G L E P+ + ++ + +I E +P+ + + P+ CS D
Sbjct: 191 GVGVDMWAVGCILAEL-LLRVPFLPGDSDLDQLTRIFETLG-TPTEEQW-PDMCSLPD 245
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 58/312 (18%)
Query: 80 SHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPC-- 137
S + ++ +G GA VV A H PT I+A+KKI F+K L +RTL E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP-----LFALRTLREIKILK 64
Query: 138 ---NEGLVEFHGAFYMPDS----GQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKL 190
+E ++ PDS ++ I E M L ++ Q + I +++ L
Sbjct: 65 HFKHENIITIFN-IQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTL 122
Query: 191 LQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIA----------MCA 240
+ + LHG +++HRD+KP+NLL+N K+ DFG++ ++ S A
Sbjct: 123 -RAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 241 TFVGTVTYMSPE-RIRNESYSYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILE 297
V T Y +PE + + YS D+WS G L E FP + L+ I+
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 298 DP----------SP--------------SPSRQNF---SPEFCSFVDDCLKKDAEARPTA 330
P SP +P + F +P+ + L D R TA
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 331 DQLLSHPFITKY 342
+ L HP++ Y
Sbjct: 301 KEALEHPYLQTY 312
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 76 YRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEA 135
YR H M +G G+ V R T A+KK+ + E C
Sbjct: 67 YREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAG 120
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLS 195
+ +V +GA + + ++I +E ++GGSL +++ +PE + L+GL
Sbjct: 121 LSSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE 178
Query: 196 YLHGVRHLVHRDIKPANLLVNLKG-RPKITDFGISA-----GLENSIAMCATFVGTVTYM 249
YLH R ++H D+K N+L++ G R + DFG + GL S+ GT T+M
Sbjct: 179 YLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 237
Query: 250 SPERIRNESYSYPADIWSIGLALFECGTGEFPYAAS-EGPVNLML 293
+PE + + DIWS + G P+ GP+ L +
Sbjct: 238 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI 282
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 148
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 207
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 208 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 253
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 254 QPTVRNYVENRP 265
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 78 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG + G E + +M+ E I
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 251
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 146
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 147 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 205
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 206 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 251
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 252 QPTVRNYVENRP 263
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 207 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 252
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 253 QPTVRNYVENRP 264
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLH 198
LV+ G + + G + I EYM GSL D LR + + L + + + YL
Sbjct: 67 LVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 199 GVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNES 258
G + VHRD+ N+LV+ K++DFG++ + + + T V + +PE +R +
Sbjct: 126 G-NNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREAA 181
Query: 259 YSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVD 317
+S +D+WS G+ L+E + G PY P+ ++ +E + P +
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 239
Query: 318 DCLKKDAEARPTADQL 333
+C DA RP+ QL
Sbjct: 240 NCWHLDAAMRPSFLQL 255
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 185
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 244
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 245 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 290
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 291 QPTVRNYVENRP 302
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 140
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 199
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 200 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 245
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 246 QPTVRNYVENRP 257
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 80 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG + G E + +M+ E I
Sbjct: 137 LED-RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 253
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 254 MIMVKCWMIDADSRPKFRELI 274
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 141
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 200
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 201 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 246
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 247 QPTVRNYVENRP 258
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 207 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 252
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 253 QPTVRNYVENRP 264
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 141
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 200
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 201 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 246
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 247 QPTVRNYVENRP 258
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 148
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M +V T Y +PE I Y
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPYVVTRYYRAPEVILGMGYKENV 207
Query: 264 DIWSIGLALFECGTGE-------FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFV 316
DIWS+G C GE FP N +++ L P PEF +
Sbjct: 208 DIWSVG-----CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP---------CPEFMKKL 253
Query: 317 DDCLKKDAEARP 328
++ E RP
Sbjct: 254 QPTVRNYVENRP 265
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSI-PEPILSSMFKKLLQGLSYLHG 199
LV+ +G + I + E+M+ G L+D LR Q+ + L M + +G++YL
Sbjct: 64 LVQLYGVCL--EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRN 256
++HRD+ N LV K++DFG++ + + +T GT V + SPE
Sbjct: 122 A-SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSF 178
Query: 257 ESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS- 314
YS +D+WS G+ ++E G+ PY +++ED S + + P S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--ISTGFRLYKPRLAST 231
Query: 315 ----FVDDCLKKDAEARPTADQLL 334
++ C K+ E RP +LL
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A R +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + I +E MD +L +++M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ S M V T Y +PE I Y
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV-TRYYRAPEVILGMGYKENV 206
Query: 264 DIWSIGLALFE--CGTGEFPYAASEGPVNLMLQILEDPSP------SPSRQNF---SPEF 312
D+WS+G + E C FP N +++ L P P P+ + + P++
Sbjct: 207 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 266
Query: 313 CSF------------------------VDDCLKK----DAEARPTADQLLSHPFITKY 342
+ D L K DA R + D+ L HP+I +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 129/313 (41%), Gaps = 64/313 (20%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRN-----QLLTEIRTL--CEAPCNE 139
GAIG G+ VV+ A+ T I A+K +N + + N ++ TE+R + P
Sbjct: 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 140 GLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM------------------------- 174
L E + D I + +E GG L D L +
Sbjct: 92 RLYEVY-----EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 175 QKSIP---------------EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL--VNL 217
+++I E ++S++ +++ L YLH + + HRDIKP N L N
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN-QGICHRDIKPENFLFSTNK 205
Query: 218 KGRPKITDFGISA---GLEN-SIAMCATFVGTVTYMSPERIR--NESYSYPADIWSIGLA 271
K+ DFG+S L N T GT +++PE + NESY D WS G+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 272 LFECGTGEFPYAASEGPVNLMLQILEDP--SPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L G P+ + + Q+L +P+ SP + + L ++ + R
Sbjct: 266 LHLLLMGAVPFPGV-NDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD 324
Query: 330 ADQLLSHPFITKY 342
A + L HP+I+++
Sbjct: 325 AMRALQHPWISQF 337
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIP---THRI-IALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E++ +GSGA V + + +P T +I +A+K +N K N + + +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
+ LV G P I + + M G L + + K +I +L + ++ +G+ Y
Sbjct: 76 HPHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ LE G + +M+ E I
Sbjct: 133 LEE-RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+++ +D+WS G+ ++E T G PY P + +LE P + +
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI--PTREIPDLLEKGERLPQPPICTIDVY 249
Query: 314 SFVDDCLKKDAEARPTADQL 333
+ C DA++RP +L
Sbjct: 250 MVMVKCWMIDADSRPKFKEL 269
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+ + G G + +R + + LKK + + + + E R L L
Sbjct: 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ H F D ++ +EY++GG L ++ EP ++ GL +L +
Sbjct: 85 QLHSCFQTMD--RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS-KG 141
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+++RD+K N++++ +G KI DFG+ F GT Y++PE I + Y
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 263 ADIWSIGLALFECGTGEFPYAASE 286
D W+ G+ L+E G+ P+ +
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 177 SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSI 236
S+PE + + L L++LH + LVH D+KPAN+ + +GR K+ DFG+ L +
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHS-QGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL-GTA 210
Query: 237 AMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTG-EFPYAASEGPVNLMLQI 295
G YM+PE ++ SY AD++S+GL + E E P+ EG Q+
Sbjct: 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-EG----WQQL 264
Query: 296 LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITK 341
+ P S E S + L+ D + R TA+ LL+ P + +
Sbjct: 265 RQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 78 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG + G E + +M+ E I
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 251
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 252 MIMRKCWMIDADSRPKFRELI 272
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + + SGA V + + IP + A+K++ K N+ + + + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + ++ M G L D +R K +I L + ++ +G++Y
Sbjct: 83 NPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 256
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSI-PEPILSSMFKKLLQGLSYLHG 199
LV+ +G + I + E+M+ G L+D LR Q+ + L M + +G++YL
Sbjct: 62 LVQLYGV--CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRN 256
++HRD+ N LV K++DFG++ + + +T GT V + SPE
Sbjct: 120 A-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSF 176
Query: 257 ESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS- 314
YS +D+WS G+ ++E G+ PY +++ED S + + P S
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--ISTGFRLYKPRLAST 229
Query: 315 ----FVDDCLKKDAEARPTADQLL 334
++ C K+ E RP +LL
Sbjct: 230 HVYQIMNHCWKERPEDRPAFSRLL 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 83 MRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLV 142
+ + G G + +R + + LKK + + + + E R L L
Sbjct: 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 143 EFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+ H F D ++ +EY++GG L ++ EP ++ GL +L +
Sbjct: 406 QLHSCFQTMD--RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS-KG 462
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYP 262
+++RD+K N++++ +G KI DFG+ F GT Y++PE I + Y
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 263 ADIWSIGLALFECGTGEFPYAASE 286
D W+ G+ L+E G+ P+ +
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGED 546
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSI-PEPILSSMFKKLLQGLSYLHG 199
LV+ +G + I + E+M+ G L+D LR Q+ + L M + +G++YL
Sbjct: 64 LVQLYGV--CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRN 256
++HRD+ N LV K++DFG++ + + +T GT V + SPE
Sbjct: 122 A-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSF 178
Query: 257 ESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS- 314
YS +D+WS G+ ++E G+ PY +++ED S + + P S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--ISTGFRLYKPRLAST 231
Query: 315 ----FVDDCLKKDAEARPTADQLL 334
++ C K+ E RP +LL
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 141/325 (43%), Gaps = 82/325 (25%)
Query: 85 IFGAIGSGASSV--VQRAVHIPTHRIIALKKINIFEKEKRNQLLT------EIRTLCEAP 136
+ IG G + V A + PT + +++IN+ + N+++T + L P
Sbjct: 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL--EACSNEMVTFLQGELHVSKLFNHP 86
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGL 194
+V + F + ++ + +M GS D++ + E ++ + + +L+ L
Sbjct: 87 ---NIVPYRATFIADN--ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA-------------T 241
Y+H + + VHR +K +++L+++ G+ ++ GL ++++M +
Sbjct: 142 DYIHHMGY-VHRSVKASHILISVDGKVYLS------GLRSNLSMISHGQRQRVVHDFPKY 194
Query: 242 FVGTVTYMSPERIRN--ESYSYPADIWSIGLALFECGTGEFPYA---ASE-------GPV 289
V + ++SPE ++ + Y +DI+S+G+ E G P+ A++ G V
Sbjct: 195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV 254
Query: 290 NLMLQI--------------------LED------PSPS-------PSRQNFSPEFCSFV 316
+L L D P PS P + FSP F FV
Sbjct: 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFV 314
Query: 317 DDCLKKDAEARPTADQLLSHPFITK 341
+ CL+++ +ARP+A LL+H F +
Sbjct: 315 EQCLQRNPDARPSASTLLNHSFFKQ 339
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 14/260 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIP---THRI-IALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E++ +GSGA V + + +P T +I +A+K +N K N + + +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
+ LV G P I + + M G L + + K +I +L + ++ +G+ Y
Sbjct: 99 HPHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ LE G + +M+ E I
Sbjct: 156 LEE-RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+++ +D+WS G+ ++E T G PY P + +LE P + +
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI--PTREIPDLLEKGERLPQPPICTIDVY 272
Query: 314 SFVDDCLKKDAEARPTADQL 333
+ C DA++RP +L
Sbjct: 273 MVMVKCWMIDADSRPKFKEL 292
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 141/325 (43%), Gaps = 82/325 (25%)
Query: 85 IFGAIGSGASSV--VQRAVHIPTHRIIALKKINIFEKEKRNQLLT------EIRTLCEAP 136
+ IG G + V A + PT + +++IN+ + N+++T + L P
Sbjct: 13 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL--EACSNEMVTFLQGELHVSKLFNHP 70
Query: 137 CNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGL 194
+V + F + ++ + +M GS D++ + E ++ + + +L+ L
Sbjct: 71 ---NIVPYRATFIADN--ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 125
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCAT------------- 241
Y+H + + VHR +K +++L+++ G+ + +GL ++++M +
Sbjct: 126 DYIHHMGY-VHRSVKASHILISVDGKVYL------SGLRSNLSMISHGQRQRVVHDFPKY 178
Query: 242 FVGTVTYMSPERIRN--ESYSYPADIWSIGLALFECGTGEFPYA---ASE-------GPV 289
V + ++SPE ++ + Y +DI+S+G+ E G P+ A++ G V
Sbjct: 179 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV 238
Query: 290 NLMLQI--------------------LED------PSPS-------PSRQNFSPEFCSFV 316
+L L D P PS P + FSP F FV
Sbjct: 239 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFV 298
Query: 317 DDCLKKDAEARPTADQLLSHPFITK 341
+ CL+++ +ARP+A LL+H F +
Sbjct: 299 EQCLQRNPDARPSASTLLNHSFFKQ 323
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A + +A+KK++ + + + L ++ L L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + D ++ + M G L +I++ Q ++ + + + +LL+GL Y+H +
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHSA-GI 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+N+ VN +I DFG++ + + +V T Y +PE + N Y+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEEM---TGYVATRWYRAPEIMLNWMHYNQT 209
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP 301
DIWS+G + E G+ FP + + +++++ PSP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 250
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSI-PEPILSSMFKKLLQGLSYLHG 199
LV+ +G + I + E+M+ G L+D LR Q+ + L M + +G++YL
Sbjct: 84 LVQLYGVCL--EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 141
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRN 256
++HRD+ N LV K++DFG++ + + +T GT V + SPE
Sbjct: 142 A-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSF 198
Query: 257 ESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS- 314
YS +D+WS G+ ++E G+ PY +++ED S + + P S
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--ISTGFRLYKPRLAST 251
Query: 315 ----FVDDCLKKDAEARPTADQLL 334
++ C K+ E RP +LL
Sbjct: 252 HVYQIMNHCWKERPEDRPAFSRLL 275
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 113/237 (47%), Gaps = 33/237 (13%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G GA V +A + R A+KKI E EK + +L+E+ L + ++ +V ++
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEV-MLLASLNHQYVVRYY 68
Query: 146 GAFY-----------MPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQG 193
A+ + + I +EY + +L D++ + + +F+++L+
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAM--------------C 239
LSY+H + ++HRD+KP N+ ++ KI DFG++ + S+ +
Sbjct: 129 LSYIHS-QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 240 ATFVGTVTYMSPERIRNES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
+ +GT Y++ E + Y+ D++S+G+ FE +P++ VN++ ++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL 241
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A + +A+KK++ + + + L ++ L L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + D ++ + M G L +I++ Q ++ + + + +LL+GL Y+H +
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKSQ-ALSDEHVQFLVYQLLRGLKYIHSA-GI 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+N+ VN +I DFG++ + + +V T Y +PE + N Y+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEEM---TGYVATRWYRAPEIMLNWMHYNQT 209
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP 301
DIWS+G + E G+ FP + + +++++ PSP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 250
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 76 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG + G E + +M+ E I
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 249
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + +GSGA V + + IP + A+K++ K N+ + + + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 83 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG + G E + +M+ E I
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 256
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 14/221 (6%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-----IFEKEKRNQLLTEIRTLCEAPCNEGLVE 143
+GSGA V A + +A+KK++ + + + L ++ L L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 144 FHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F A + D ++ + M G L +I++ Q ++ + + + +LL+GL Y+H +
Sbjct: 88 FTPATSIEDFSEVYLVTTLM-GADLNNIVKCQ-ALSDEHVQFLVYQLLRGLKYIHSA-GI 144
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNE-SYSYP 262
+HRD+KP+N+ VN +I DFG++ + + +V T Y +PE + N Y+
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLARQADEEM---TGYVATRWYRAPEIMLNWMHYNQT 201
Query: 263 ADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSP 301
DIWS+G + E G+ FP + + +++++ PSP
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 242
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 179
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 240 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 329 TADQLL 334
T QL+
Sbjct: 298 TFKQLV 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 113
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 172
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 232
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 233 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 290
Query: 329 TADQLL 334
T QL+
Sbjct: 291 TFKQLV 296
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 112
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 171
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 231
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 232 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 289
Query: 329 TADQLL 334
T QL+
Sbjct: 290 TFKQLV 295
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSI-PEPILSSMFKKLLQGLSYLHG 199
LV+ +G + I + E+M+ G L+D LR Q+ + L M + +G++YL
Sbjct: 67 LVQLYGV--CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 124
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRN 256
++HRD+ N LV K++DFG++ + + +T GT V + SPE
Sbjct: 125 A-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSF 181
Query: 257 ESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS- 314
YS +D+WS G+ ++E G+ PY +++ED S + + P S
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--ISTGFRLYKPRLAST 234
Query: 315 ----FVDDCLKKDAEARPTADQLL 334
++ C ++ E RP +LL
Sbjct: 235 HVYQIMNHCWRERPEDRPAFSRLL 258
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 179
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 240 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 329 TADQLL 334
T QL+
Sbjct: 298 TFKQLV 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 109
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 168
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 228
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 229 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 286
Query: 329 TADQLL 334
T QL+
Sbjct: 287 TFKQLV 292
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 105
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 164
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 225 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 282
Query: 329 TADQLL 334
T QL+
Sbjct: 283 TFKQLV 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 179
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 240 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 329 TADQLL 334
T QL+
Sbjct: 298 TFKQLV 303
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + + SGA V + + IP + A+K++ K N+ + + + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 83 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 256
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALK-KINIFEKEKRNQLLTEIRTLCEAPCNEG 140
E+R +GSGA V + + IP + + I + + + EI L EA G
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI--LDEAYVMAG 75
Query: 141 LVEFHGAFYMPD------SGQISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQG 193
+ G+ Y+ + + + + M G L D +R + + L + ++ +G
Sbjct: 76 V----GSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKG 131
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV--TYMSP 251
+SYL VR LVHRD+ N+LV KITDFG++ L+ G V +M+
Sbjct: 132 MSYLEDVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E I +++ +D+WS G+ ++E T G PY P + +LE P +
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI--PAREIPDLLEKGERLPQPPICTI 248
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + C D+E RP +L+S
Sbjct: 249 DVYMIMVKCWMIDSECRPRFRELVSE 274
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRII----ALKKINIFEKEKRNQLLTEIRTLCEAPC 137
E + + SGA V + + IP + A+K++ K N+ + + + +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSY 196
N + G + + + + M G L D +R K +I L + ++ +G++Y
Sbjct: 76 NPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVGTVTYMSPERI 254
L R LVHRD+ N+LV KITDFG++ G E + +M+ E I
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 255 RNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
+ Y++ +D+WS G+ ++E T G PY P + + ILE P + +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVY 249
Query: 314 SFVDDCLKKDAEARPTADQLL 334
+ C DA++RP +L+
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 161
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 220
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 281 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 338
Query: 329 TADQLL 334
T QL+
Sbjct: 339 TFKQLV 344
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSY 196
+E LV+ +G I I EYM G L + LR M+ L M K + + + Y
Sbjct: 58 HEKLVQLYGV--CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 115
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
L + +HRD+ N LVN +G K++DFG+S + E + ++ + F V + PE
Sbjct: 116 LES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEV 172
Query: 254 IRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQILEDPSPSPSRQNFSP 310
+ +S +DIW+ G+ ++E + G+ PY + + Q L P + S
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----SE 228
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + + C + A+ RPT LLS+
Sbjct: 229 KVYTIMYSCWHEKADERPTFKILLSN 254
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSY 196
+E LV+ +G I I EYM G L + LR M+ L M K + + + Y
Sbjct: 63 HEKLVQLYGV--CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
L + +HRD+ N LVN +G K++DFG+S + E + ++ + F V + PE
Sbjct: 121 LES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEV 177
Query: 254 IRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQILEDPSPSPSRQNFSP 310
+ +S +DIW+ G+ ++E + G+ PY + + Q L P + S
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----SE 233
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + + C + A+ RPT LLS+
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLSN 259
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A +A+KK++ F+ + + L + ++ ++
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L ++ M+ + +S + ++L G+ +LH +
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDA-NLCQVIHME--LDHERMSYLLYQMLCGIKHLHSAG-I 145
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ + M +V T Y +PE I Y
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM-TPYVVTRYYRAPEVILGMGYKENV 204
Query: 264 DIWSIGLALFECGTGEFPYAASE--GPVNLMLQILEDPSP------SPSRQNFS------ 309
DIWS+G + E G + ++ N +++ L PS P+ +N+
Sbjct: 205 DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAY 264
Query: 310 ---------PEF------------CSFVDDCLKK----DAEARPTADQLLSHPFITKY 342
P++ S D L K D + R + D+ L HP+IT +
Sbjct: 265 PGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW 322
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSY 196
+E LV+ +G I I EYM G L + LR M+ L M K + + + Y
Sbjct: 62 HEKLVQLYGV--CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
L + +HRD+ N LVN +G K++DFG+S + E + ++ + F V + PE
Sbjct: 120 LES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEV 176
Query: 254 IRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQILEDPSPSPSRQNFSP 310
+ +S +DIW+ G+ ++E + G+ PY + + Q L P + S
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----SE 232
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + + C + A+ RPT LLS+
Sbjct: 233 KVYTIMYSCWHEKADERPTFKILLSN 258
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSI-PEPILSSMFKKLLQGLSYLHG 199
LV+ +G + I + E+M+ G L+D LR Q+ + L M + +G++YL
Sbjct: 65 LVQLYGVCL--EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERIRN 256
++HRD+ N LV K++DFG++ + + +T GT V + SPE
Sbjct: 123 A-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSF 179
Query: 257 ESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS- 314
YS +D+WS G+ ++E G+ PY +++ED S + + P S
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--ISTGFRLYKPRLAST 232
Query: 315 ----FVDDCLKKDAEARPTADQLL 334
++ C ++ E RP +LL
Sbjct: 233 HVYQIMNHCWRERPEDRPAFSRLL 256
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 25/246 (10%)
Query: 109 IALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
+A+K + EK + L++E+ + ++ ++ GA G + + +EY G+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 168 LADILRMQK-----------SIPEPILSSM-----FKKLLQGLSYLHGVRHLVHRDIKPA 211
L + L+ ++ PE LSS ++ +G+ YL + +HRD+
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAAR 179
Query: 212 NLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIG 269
N+LV KI DFG++ + + T G V +M+PE + + Y++ +D+WS G
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 270 LALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
+ L+E T G PY PV + ++L++ N + E + DC RP
Sbjct: 240 VLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 329 TADQLL 334
T QL+
Sbjct: 298 TFKQLV 303
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+E ++++ G + + +EY+ GSL D L + SI L +++ +G++YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYL 133
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
H +H +HR++ N+L++ KI DFG++ + + V + +PE +
Sbjct: 134 HA-QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 255 RNESYSYPADIWSIGLALFE----CGTGEFP---------YAASEGPVNLMLQILEDPSP 301
+ + Y +D+WS G+ L+E C + + P A + V + ++LE
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
P E + +C + +A RPT + L+
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 34/271 (12%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
E + +GSGA V + + IP EK K + E+R N+ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEG-----------EKVKIPVAIMELREATSPKANKEI 98
Query: 142 VEFHGAFYMPD--------------SGQISIALEYMDGGSLADILRMQK-SIPEPILSSM 186
++ A+ M + + + + M G L D +R K +I L +
Sbjct: 99 LD--EAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 156
Query: 187 FKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISA--GLENSIAMCATFVG 244
++ +G++YL R LVHRD+ N+LV KITDFG++ G E
Sbjct: 157 CVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 245 TVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSP 303
+ +M+ E I + Y++ +D+WS G+ ++E T G PY P + + ILE P
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLP 273
Query: 304 SRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
+ + + C DA++RP +L+
Sbjct: 274 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSY 196
+E LV+ +G I I EYM G L + LR M+ L M K + + + Y
Sbjct: 78 HEKLVQLYGV--CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
L + +HRD+ N LVN +G K++DFG+S + E + ++ + F V + PE
Sbjct: 136 LES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEV 192
Query: 254 IRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQILEDPSPSPSRQNFSP 310
+ +S +DIW+ G+ ++E + G+ PY + + Q L P + S
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----SE 248
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + + C + A+ RPT LLS+
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLSN 274
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSY 196
+E LV+ +G I I EYM G L + LR M+ L M K + + + Y
Sbjct: 69 HEKLVQLYGV--CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
L + +HRD+ N LVN +G K++DFG+S + E + ++ + F V + PE
Sbjct: 127 LES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEV 183
Query: 254 IRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQILEDPSPSPSRQNFSP 310
+ +S +DIW+ G+ ++E + G+ PY + + Q L P + S
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----SE 239
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + + C + A+ RPT LLS+
Sbjct: 240 KVYTIMYSCWHEKADERPTFKILLSN 265
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
+E ++++ G + + +EY+ GSL D L + SI L +++ +G++YL
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYL 133
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERI 254
H +H +HR++ N+L++ KI DFG++ + + V + +PE +
Sbjct: 134 HS-QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 255 RNESYSYPADIWSIGLALFE----CGTGEFP---------YAASEGPVNLMLQILEDPSP 301
+ + Y +D+WS G+ L+E C + + P A + V + ++LE
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 302 SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
P E + +C + +A RPT + L+
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 51/290 (17%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + + + A+KK+ + +K +N+ L +I + + P +V+
Sbjct: 47 VIGNGSFGVVFQAKLVESDEV-AIKKV-LQDKRFKNREL-QIMRIVKHP---NVVDLKAF 100
Query: 148 FY----MPDSGQISIALEYMDGG---SLADILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ LEY+ + ++++++P ++ +LL+ L+Y+H +
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 201 RHLVHRDIKPANLLVN-LKGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ G K+ DFG + AG N +C+ + Y +PE I
Sbjct: 161 -GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPELIF 214
Query: 256 NES-YSYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS------------ 300
+ Y+ DIWS G + E G+ FP + + ++++L PS
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274
Query: 301 --------PSPSRQNFS----PEFCSFVDDCLKKDAEARPTADQLLSHPF 338
P P + F P+ + L+ AR TA + L HPF
Sbjct: 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 42/267 (15%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
+G G + V + + T ALK + K +R L + C P +V+ +
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIVRIVDVYEN 82
Query: 148 FYMPDSGQ--ISIALEYMDGGSLADIL--RMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
Y +G+ + I +E +DGG L + R ++ E S + K + + + YLH + ++
Sbjct: 83 LY---AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NI 138
Query: 204 VHRDIKPANLLVNLKGRP----KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESY 259
HRD+KP NLL K RP K+TDFG + + E Y
Sbjct: 139 AHRDVKPENLLYTSK-RPNAILKLTDFGFA----------------------KETTGEKY 175
Query: 260 SYPADIWSIGLALFECGTGEFPYAASEG-----PVNLMLQILEDPSPSPSRQNFSPEFCS 314
D+WS+G+ ++ G P+ ++ G + +++ + P+P S E
Sbjct: 176 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 235
Query: 315 FVDDCLKKDAEARPTADQLLSHPFITK 341
+ + LK + R T + ++HP+I +
Sbjct: 236 LIRNLLKTEPTQRMTITEFMNHPWIMQ 262
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSY 196
+E LV+ +G I I EYM G L + LR M+ L M K + + + Y
Sbjct: 78 HEKLVQLYGV--CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
L + +HRD+ N LVN +G K++DFG+S + E + ++ + F V + PE
Sbjct: 136 LES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEV 192
Query: 254 IRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQILEDPSPSPSRQNFSP 310
+ +S +DIW+ G+ ++E + G+ PY + + Q L P + S
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----SE 248
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + + C + A+ RPT LLS+
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLSN 274
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRA-VHIPTHRIIA-----LKKINIFEKEKRNQLLTEIRTLCEA 135
++R+ +G G+ VV+R P+ + ++ LK + + E + + E+ + +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-HS 67
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM-QKSIPEPILSSMFKKLLQGL 194
+ L+ +G P + + E GSL D LR Q LS ++ +G+
Sbjct: 68 LDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSP 251
YL R +HRD+ NLL+ + KI DFG+ L ++ M + +P
Sbjct: 125 GYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E ++ ++S+ +D W G+ L+E T G+ P+ G ++ +I ++ P ++
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQ 242
Query: 311 EFCSFVDDCLKKDAEARPT 329
+ + + C E RPT
Sbjct: 243 DIYNVMVQCWAHKPEDRPT 261
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSY 196
+E LV+ +G I I EYM G L + LR M+ L M K + + + Y
Sbjct: 63 HEKLVQLYGV--CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
L + +HRD+ N LVN +G K++DFG+S + E + + + F V + PE
Sbjct: 121 LES-KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF--PVRWSPPEV 177
Query: 254 IRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQILEDPSPSPSRQNFSP 310
+ +S +DIW+ G+ ++E + G+ PY + + Q L P + S
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----SE 233
Query: 311 EFCSFVDDCLKKDAEARPTADQLLSH 336
+ + + C + A+ RPT LLS+
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLSN 259
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRA-VHIPTHRIIA-----LKKINIFEKEKRNQLLTEIRTLCEA 135
++R+ +G G+ VV+R P+ + ++ LK + + E + + E+ + +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-HS 67
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM-QKSIPEPILSSMFKKLLQGL 194
+ L+ +G P + + E GSL D LR Q LS ++ +G+
Sbjct: 68 LDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSP 251
YL R +HRD+ NLL+ + KI DFG+ L ++ M + +P
Sbjct: 125 GYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E ++ ++S+ +D W G+ L+E T G+ P+ G ++ +I ++ P ++
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQ 242
Query: 311 EFCSFVDDCLKKDAEARPT 329
+ + + C E RPT
Sbjct: 243 DIYNVMVQCWAHKPEDRPT 261
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 186 MFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN----------- 234
+F ++ + + +LH + L+HRD+KP+N+ + K+ DFG+ ++
Sbjct: 169 IFIQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 235 -SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLML 293
+ A VGT YMSPE+I +YS+ DI+S+GL LFE + ++ V ++
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIIT 284
Query: 294 QILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSH 336
+ P Q + P+ V D L RP A ++ +
Sbjct: 285 DVRNLKFPLLFTQKY-PQEHMMVQDMLSPSPTERPEATDIIEN 326
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRA-VHIPTHRIIA-----LKKINIFEKEKRNQLLTEIRTLCEA 135
++R+ +G G+ VV+R P+ + ++ LK + + E + + E+ + +
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-HS 71
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM-QKSIPEPILSSMFKKLLQGL 194
+ L+ +G P + + E GSL D LR Q LS ++ +G+
Sbjct: 72 LDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 128
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSP 251
YL R +HRD+ NLL+ + KI DFG+ L ++ M + +P
Sbjct: 129 GYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E ++ ++S+ +D W G+ L+E T G+ P+ G ++ +I ++ P ++
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQ 246
Query: 311 EFCSFVDDCLKKDAEARPT 329
+ + + C E RPT
Sbjct: 247 DIYNVMVQCWAHKPEDRPT 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRA-VHIPTHRIIA-----LKKINIFEKEKRNQLLTEIRTLCEA 135
++R+ +G G+ VV+R P+ + ++ LK + + E + + E+ + +
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-HS 77
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM-QKSIPEPILSSMFKKLLQGL 194
+ L+ +G P + + E GSL D LR Q LS ++ +G+
Sbjct: 78 LDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSP 251
YL R +HRD+ NLL+ + KI DFG+ L ++ M + +P
Sbjct: 135 GYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E ++ ++S+ +D W G+ L+E T G+ P+ G ++ +I ++ P ++
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQ 252
Query: 311 EFCSFVDDCLKKDAEARPT 329
+ + + C E RPT
Sbjct: 253 DIYNVMVQCWAHKPEDRPT 271
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 71/339 (20%)
Query: 67 DESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLL 126
D+ + + + ++ + IG G+ V +A H+ +ALK + EK Q
Sbjct: 83 DQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAA 141
Query: 127 TEIRTL---CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK--SIPEP 181
EIR L + + + H I + E + +L ++++ K P
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLP 200
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP--KITDFGISAGLENSIAMC 239
++ +LQ L LH R ++H D+KP N+L+ +GR K+ DFG S +
Sbjct: 201 LVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY-- 257
Query: 240 ATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASE---GPVNLMLQIL 296
T + + Y +PE I Y P D+WS+G L E TG +P E + M+++L
Sbjct: 258 -TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELL 315
Query: 297 EDPS-----PSPSRQNFS-----PEFCS-------------------------------- 314
PS S +NF P +C+
Sbjct: 316 GMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGN 375
Query: 315 ------------FVDDCLKKDAEARPTADQLLSHPFITK 341
F+ CL+ D R T Q L HP++ +
Sbjct: 376 ALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRA-VHIPTHRIIA-----LKKINIFEKEKRNQLLTEIRTLCEA 135
++R+ +G G+ VV+R P+ + ++ LK + + E + + E+ + +
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-HS 77
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM-QKSIPEPILSSMFKKLLQGL 194
+ L+ +G P + + E GSL D LR Q LS ++ +G+
Sbjct: 78 LDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSP 251
YL R +HRD+ NLL+ + KI DFG+ L ++ M + +P
Sbjct: 135 GYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E ++ ++S+ +D W G+ L+E T G+ P+ G ++ +I ++ P ++
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQ 252
Query: 311 EFCSFVDDCLKKDAEARPT 329
+ + + C E RPT
Sbjct: 253 DIYNVMVQCWAHKPEDRPT 271
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRA-VHIPTHRIIA-----LKKINIFEKEKRNQLLTEIRTLCEA 135
++R+ +G G+ VV+R P+ + ++ LK + + E + + E+ + +
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-HS 71
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM-QKSIPEPILSSMFKKLLQGL 194
+ L+ +G P + + E GSL D LR Q LS ++ +G+
Sbjct: 72 LDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 128
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSP 251
YL R +HRD+ NLL+ + KI DFG+ L ++ M + +P
Sbjct: 129 GYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E ++ ++S+ +D W G+ L+E T G+ P+ G ++ +I ++ P ++
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQ 246
Query: 311 EFCSFVDDCLKKDAEARPT 329
+ + + C E RPT
Sbjct: 247 DIYNVMVQCWAHKPEDRPT 265
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 82 EMRIFGAIGSGASSVVQRA-VHIPTHRIIA-----LKKINIFEKEKRNQLLTEIRTLCEA 135
++R+ +G G+ VV+R P+ + ++ LK + + E + + E+ + +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-HS 67
Query: 136 PCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM-QKSIPEPILSSMFKKLLQGL 194
+ L+ +G P + + E GSL D LR Q LS ++ +G+
Sbjct: 68 LDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSP 251
YL R +HRD+ NLL+ + KI DFG+ L ++ M + +P
Sbjct: 125 GYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 252 ERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSP 310
E ++ ++S+ +D W G+ L+E T G+ P+ G ++ +I ++ P ++
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQ 242
Query: 311 EFCSFVDDCLKKDAEARPT 329
+ + + C E RPT
Sbjct: 243 DIYNVMVQCWAHKPEDRPT 261
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 49/298 (16%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IGSGA +V A +A+KK++ F+ + + L + ++ ++
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 148 FY----MPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
F + + + + +E MD +L ++ M+ + +S + ++L G+ +LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDA-NLCQVIHME--LDHERMSYLLYQMLCGIKHLHSA-GI 147
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
+HRD+KP+N++V KI DFG++ + M +V T Y +PE I Y+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM-TPYVVTRYYRAPEVILGMGYAANV 206
Query: 264 DIWSIGLALFECGTGEFPYAASE--GPVNLMLQILEDPSP------SPSRQNF---SPEF 312
DIWS+G + E G + ++ N +++ L PS P+ +N+ P++
Sbjct: 207 DIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKY 266
Query: 313 ------------------------CSFVDDCLKK----DAEARPTADQLLSHPFITKY 342
S D L K D + R + D+ L HP+IT +
Sbjct: 267 PGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW 324
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 131 TLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKL 190
+ C P L+ F + ++ + +YM+ G+L R P +S +++
Sbjct: 90 SFCRHPHLVSLIGF-----CDERNEMILIYKYMENGNLK---RHLYGSDLPTMSMSWEQR 141
Query: 191 LQ-------GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGIS-AGLE-NSIAMCAT 241
L+ GL YLH R ++HRD+K N+L++ PKITDFGIS G E + +
Sbjct: 142 LEICIGAARGLHYLH-TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 242 FVGTVTYMSPERIRNESYSYPADIWSIGLALFE--CGTGEFPYAASEGPVNLMLQILEDP 299
GT+ Y+ PE + +D++S G+ LFE C + VNL +E
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 300 SPSPSRQNFSP------------EFCSFVDDCLKKDAEARPTADQLL 334
+ Q P +F CL +E RP+ +L
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 71/339 (20%)
Query: 67 DESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLL 126
D+ + + + ++ + IG G+ V +A H+ +ALK + EK Q
Sbjct: 83 DQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAA 141
Query: 127 TEIRTL---CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK--SIPEP 181
EIR L + + + H I + E + +L ++++ K P
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLP 200
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP--KITDFGISAGLENSIAMC 239
++ +LQ L LH R ++H D+KP N+L+ +GR K+ DFG S +
Sbjct: 201 LVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY-- 257
Query: 240 ATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASE---GPVNLMLQIL 296
T + + Y +PE I Y P D+WS+G L E TG +P E + M+++L
Sbjct: 258 -TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELL 315
Query: 297 EDPS-----PSPSRQNFS-----PEFCS-------------------------------- 314
PS S +NF P +C+
Sbjct: 316 GMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGN 375
Query: 315 ------------FVDDCLKKDAEARPTADQLLSHPFITK 341
F+ CL+ D R T Q L HP++ +
Sbjct: 376 ALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKLLQGLSY 196
+E +V++ G + + +EY+ GSL D L R + + +L + +++ +G++Y
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFA--QQICEGMAY 127
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
LH +H +HR + N+L++ KI DFG++ + + V + +PE
Sbjct: 128 LHA-QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 254 IRNESYSYPADIWSIGLALFE----CGTGEFPYAA-------SEGPVNL--MLQILEDPS 300
++ + Y +D+WS G+ L+E C + + P+ ++G + + + ++LE
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 246
Query: 301 PSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
P E + +C + +A RPT L+
Sbjct: 247 RLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 280
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 33/237 (13%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
+G GA V +A + R A+KKI E EK + +L+E+ L + ++ +V ++
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLA-SLNHQYVVRYY 68
Query: 146 GA------FYMPDSG-----QISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQG 193
A F P + + I EY + +L D++ + + +F+++L+
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 194 LSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAM--------------C 239
LSY+H + ++HR++KP N+ ++ KI DFG++ + S+ +
Sbjct: 129 LSYIHS-QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 240 ATFVGTVTYMSPERIRNES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQI 295
+ +GT Y++ E + Y+ D +S+G+ FE +P++ VN++ ++
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKL 241
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADIL-RMQKSIPEPILSSMFKKLLQGLSY 196
+E +V++ G + + +EY+ GSL D L R + + +L + +++ +G++Y
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFA--QQICEGMAY 126
Query: 197 LHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPER 253
LH +H +HR + N+L++ KI DFG++ + + V + +PE
Sbjct: 127 LHA-QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 254 IRNESYSYPADIWSIGLALFE----CGTGEFPYAA-------SEGPVNL--MLQILEDPS 300
++ + Y +D+WS G+ L+E C + + P+ ++G + + + ++LE
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 245
Query: 301 PSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
P E + +C + +A RPT L+
Sbjct: 246 RLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 279
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 22/251 (8%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 57 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 115
Query: 164 DGGSLADILRMQKS--IPEPILSSMFKKLL-------------QGLSYLHGVRHLVHRDI 208
G+L+ LR +++ +P ++K L +G+ +L R +HRD+
Sbjct: 116 KFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRDL 174
Query: 209 KPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV--TYMSPERIRNESYSYPADIW 266
N+L++ K KI DFG++ + + +M+PE I + Y+ +D+W
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 267 SIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAE 325
S G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 326 ARPTADQLLSH 336
RPT +L+ H
Sbjct: 294 QRPTFSELVEH 304
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 131 TLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKL 190
+ C P L+ F + ++ + +YM+ G+L R P +S +++
Sbjct: 90 SFCRHPHLVSLIGF-----CDERNEMILIYKYMENGNLK---RHLYGSDLPTMSMSWEQR 141
Query: 191 LQ-------GLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGIS-AGLE-NSIAMCAT 241
L+ GL YLH R ++HRD+K N+L++ PKITDFGIS G E +
Sbjct: 142 LEICIGAARGLHYLH-TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 242 FVGTVTYMSPERIRNESYSYPADIWSIGLALFE--CGTGEFPYAASEGPVNLMLQILEDP 299
GT+ Y+ PE + +D++S G+ LFE C + VNL +E
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 300 SPSPSRQNFSP------------EFCSFVDDCLKKDAEARPTADQLL 334
+ Q P +F CL +E RP+ +L
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 151 PDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIK 209
P+ + + E + LA I + + + IP + + K+LL GL Y+H ++H DIK
Sbjct: 100 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK 159
Query: 210 PANLLVNLKGRP------KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
P N+L+ + P KI D G + + + T Y SPE + + A
Sbjct: 160 PENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS---IQTREYRSPEVLLGAPWGCGA 216
Query: 264 DIWSIGLALFECGTGEFPYAASEG 287
DIWS +FE TG+F + EG
Sbjct: 217 DIWSTACLIFELITGDFLFEPDEG 240
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 17/247 (6%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 114
Query: 164 DGGSLADILRMQKS--IPEPILSSMFKKLLQGLSYLHGV---------RHLVHRDIKPAN 212
G+L+ LR +++ +P L F L + Y V R +HRD+ N
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARN 174
Query: 213 LLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
+L++ K KI DFG++ + + + +M+PE I + Y+ +D+WS G+
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 271 ALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L+E G PY + + L++ + + +PE + DC + RPT
Sbjct: 235 LLWEIFSLGASPYPGVKIDEEFXRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 293
Query: 330 ADQLLSH 336
+L+ H
Sbjct: 294 FSELVEH 300
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 156 ISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ + +E GG L L ++ IP ++ + ++ G+ YL ++ VHRD+ N+L
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE-KNFVHRDLAARNVL 142
Query: 215 VNLKGRPKITDFGISAGL-ENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLA 271
+ + KI+DFG+S L + A G + + +PE I +S +D+WS G+
Sbjct: 143 LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT 202
Query: 272 LFEC-GTGEFPYAASEGPVNLML----QILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEA 326
++E G+ PY +GP + + +E P P PE + + DC E
Sbjct: 203 MWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP------PELYALMSDCWIYKWED 256
Query: 327 RP 328
RP
Sbjct: 257 RP 258
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFH--- 145
+G G + +V AV + +A+KKI + + + L EI+ + + + F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 146 --GAFYMPDSGQIS------IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYL 197
G+ D G ++ I EYM+ LA++L + E M++ LL+GL Y+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQ-LLRGLKYI 136
Query: 198 HGVRHLVHRDIKPANLLVNLKGRP-KITDFGISAGLENSIAMCATFV-GTVT--YMSPER 253
H +++HRD+KPANL +N + KI DFG++ ++ + G VT Y SP
Sbjct: 137 HSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195
Query: 254 IRN-ESYSYPADIWSIGLALFECGTGEFPYAASEG------------------------- 287
+ + +Y+ D+W+ G E TG+ +A +
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSV 255
Query: 288 -PVNLMLQILEDPSP-SPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKY 342
PV + + E P + S E F++ L R TA++ LSHP+++ Y
Sbjct: 256 IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY 312
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 151 PDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIK 209
P+ + + E + LA I + + + IP + + K+LL GL Y+H ++H DIK
Sbjct: 100 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK 159
Query: 210 PANLLVNLKGRP------KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPA 263
P N+L+ + P KI D G + + + T Y SPE + + A
Sbjct: 160 PENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS---IQTREYRSPEVLLGAPWGCGA 216
Query: 264 DIWSIGLALFECGTGEFPYAASEG 287
DIWS +FE TG+F + EG
Sbjct: 217 DIWSTACLIFELITGDFLFEPDEG 240
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 109/250 (43%), Gaps = 40/250 (16%)
Query: 85 IFGAIGSGA-SSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEA----PCNE 139
I +G G VVQ H +ALK I EK K L EI L + P N+
Sbjct: 37 IVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL-EINVLEKINEKDPDNK 95
Query: 140 GL-VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPI--LSSMFKKLLQGLSY 196
L V+ F G + I+ E + G S D L+ +P PI + M +L Q + +
Sbjct: 96 NLCVQMFDWF--DYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKF 152
Query: 197 LHGVRHLVHRDIKPANLLV---------NLKGRP----------KITDFGISAGLENSIA 237
LH + L H D+KP N+L NL+ + ++ DFG SA ++
Sbjct: 153 LHDNK-LTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFG-SATFDHE-- 208
Query: 238 MCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE--CGTGEFPYAASEGPVNLMLQI 295
+T V T Y +PE I +S P D+WSIG +FE G F + + +M +I
Sbjct: 209 HHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERI 268
Query: 296 LEDPSPSPSR 305
L P PSR
Sbjct: 269 L---GPIPSR 275
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 17/247 (6%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 114
Query: 164 DGGSLADILRMQKS--IPEPILSSMFKKLLQGLSYLHGV---------RHLVHRDIKPAN 212
G+L+ LR +++ +P L F L + Y V R +HRD+ N
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARN 174
Query: 213 LLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGL 270
+L++ K KI DFG++ + + + +M+PE I + Y+ +D+WS G+
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 271 ALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
L+E G PY + + L++ + + +PE + DC + RPT
Sbjct: 235 LLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 293
Query: 330 ADQLLSH 336
+L+ H
Sbjct: 294 FSELVEH 300
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 21/250 (8%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 58 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 116
Query: 164 DGGSLADILRMQKS-----IPEPILSSMFK---------KLLQGLSYLHGVRHLVHRDIK 209
G+L+ LR +++ PE + ++ +G+ +L R +HRD+
Sbjct: 117 KFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL-ASRKXIHRDLA 175
Query: 210 PANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV--TYMSPERIRNESYSYPADIWS 267
N+L++ K KI DFG++ + + +M+PE I + Y+ +D+WS
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 268 IGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEA 326
G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 294
Query: 327 RPTADQLLSH 336
RPT +L+ H
Sbjct: 295 RPTFSELVEH 304
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
+G GA++ V R H T + A+K N + + + + ++ +V+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKS---IPEPILSSMFKKLLQGLSYLHGVRHLVH 205
+ + +E+ GSL +L + +PE + + ++ G+++L +VH
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-NGIVH 135
Query: 206 RDIKPANLL--VNLKGRP--KITDFGISAGLENSIAMCATFVGTVTYMSPE--------R 253
R+IKP N++ + G+ K+TDFG + LE+ + + GT Y+ P+ +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-GTEEYLHPDMYERAVLRK 194
Query: 254 IRNESYSYPADIWSIGLALFECGTGEFPYAASEGP 288
+ Y D+WSIG+ + TG P+ EGP
Sbjct: 195 DHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
+G GA++ V R H T + A+K N + + + + ++ +V+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 149 YMPDSGQISIALEYMDGGSLADILRMQKS---IPEPILSSMFKKLLQGLSYLHGVRHLVH 205
+ + +E+ GSL +L + +PE + + ++ G+++L +VH
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-NGIVH 135
Query: 206 RDIKPANLL--VNLKGRP--KITDFGISAGLENSIAMCATFVGTVTYMSPE--------R 253
R+IKP N++ + G+ K+TDFG + LE+ + GT Y+ P+ +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY-GTEEYLHPDMYERAVLRK 194
Query: 254 IRNESYSYPADIWSIGLALFECGTGEFPYAASEGP 288
+ Y D+WSIG+ + TG P+ EGP
Sbjct: 195 DHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 31/267 (11%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKE---KRNQLLTEIRTLCEAPCN 138
E+ + +GSG VV+ + + A+K I KE ++ E +T+ + +
Sbjct: 9 EITLLKELGSGQFGVVKLGKWKGQYDV-AVKMI----KEGSMSEDEFFQEAQTMMKLS-H 62
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP-ILSSMFKKLLQGLSYL 197
LV+F+G I I EY+ G L + LR EP L M + +G+++L
Sbjct: 63 PKLVKFYGV--CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT---VTYMSPERI 254
+HRD+ N LV+ K++DFG++ + + + + VGT V + +PE
Sbjct: 121 ES-HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS--VGTKFPVKWSAPEVF 177
Query: 255 RNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC 313
YS +D+W+ G+ ++E G+ PY ++L++ S + + P
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-EVVLKV------SQGHRLYRPHLA 230
Query: 314 S-----FVDDCLKKDAEARPTADQLLS 335
S + C + E RPT QLLS
Sbjct: 231 SDTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 29/282 (10%)
Query: 70 DHSEKTYRCASH-----EMRIFGAIGSGASSVVQRAVHIPTHRIIALKK-INIFEKEKRN 123
D SEK + + E+R +GSG V + V IP I + I + E +
Sbjct: 15 DPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR 74
Query: 124 QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP-I 182
Q + A + + + + +Y+ GSL D +R + P +
Sbjct: 75 QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQL 134
Query: 183 LSSMFKKLLQGLSYL--HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAM 238
L + ++ +G+ YL HG +VHR++ N+L+ + ++ DFG++ L ++ +
Sbjct: 135 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 239 CATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILE 297
+ + +M+ E I Y++ +D+WS G+ ++E T G PYA L++ E
Sbjct: 192 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAE 243
Query: 298 DPSPSPSRQNFS-PEFCSF-----VDDCLKKDAEARPTADQL 333
P + + P+ C+ + C D RPT +L
Sbjct: 244 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 24/265 (9%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKK-INIFEKEKRNQLLTEIRTLCEAPCNEG 140
E+R +GSG V + V IP I + I + E + Q + A +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 141 LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEP-ILSSMFKKLLQGLSYL-- 197
+ + + +Y+ GSL D +R + P +L + ++ +G+ YL
Sbjct: 74 HAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 198 HGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIR 255
HG +VHR++ N+L+ + ++ DFG++ L ++ + + + +M+ E I
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 256 NESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFS-PEFC 313
Y++ +D+WS G+ ++E T G PYA L++ E P + + P+ C
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPDLLEKGERLAQPQIC 242
Query: 314 SF-----VDDCLKKDAEARPTADQL 333
+ + C D RPT +L
Sbjct: 243 TIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 146
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 147 QHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
Query: 275 C-GTGEFPYAASEGP-VNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 207 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 259
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 105
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 164
Query: 208 IKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV--TYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + +M+PE I + Y+ +D+
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 283
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 284 SQRPTFSELVEH 295
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 140
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 141 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
Query: 275 C-GTGEFPYAASEG-PVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 201 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 253
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 142
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 143 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
Query: 275 C-GTGEFPYAASEG-PVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 203 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 255
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 146
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 147 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
Query: 275 C-GTGEFPYAASEG-PVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 207 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 259
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 114
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 173
Query: 208 IKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV--TYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + +M+PE I + Y+ +D+
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 292
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 293 SQRPTFSELVEH 304
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 130/299 (43%), Gaps = 53/299 (17%)
Query: 82 EMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGL 141
+ ++ +G G S V A++I + + +K I + K+N++ EI+ L +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVK---ILKPVKKNKIKREIKILENLRGGPNI 94
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
+ P S ++ E+++ D ++ +++ + + ++L+ L Y H +
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNN---TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 202 HLVHRDIKPANLLVNLKGRP-KITDFGISA----GLENSIAMCATFVGTVTYMSPERIRN 256
++HRD+KP N++++ + R ++ D+G++ G E ++ + + + + PE + +
Sbjct: 152 -IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY-----FKGPELLVD 205
Query: 257 -ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE------------------ 297
+ Y Y D+WS+G L + P+ + +++I +
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 298 DPS-----------------PSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
DP S ++ SPE F+D L+ D ++R TA + + HP+
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 152
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 153 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
Query: 275 C-GTGEFPYAASEG-PVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 213 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 265
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 110 ALKKINIF-EKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSL 168
A+K++ + K+ E+ LC+ + ++ GA G + +A+EY G+L
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA--CEHRGYLYLAIEYAPHGNL 113
Query: 169 ADILRMQK--------SIPEPILSSMFKKLL--------QGLSYLHGVRHLVHRDIKPAN 212
D LR + +I S++ + L +G+ YL + +HRD+ N
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-SQKQFIHRDLAARN 172
Query: 213 LLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
+LV KI DFG+S G E + + V +M+ E + Y+ +D+WS G+ L
Sbjct: 173 ILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 273 FE-CGTGEFPYAASEGPVNLMLQILEDPSPSPSR----QNFSPEFCSFVDDCLKKDAEAR 327
+E G PY + L + P R N E + C ++ R
Sbjct: 232 WEIVSLGGTPYCG------MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYER 285
Query: 328 PTADQLL 334
P+ Q+L
Sbjct: 286 PSFAQIL 292
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 58 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 116
Query: 164 DGGSLADILRMQ-------KSIPEPILSSMFK---------KLLQGLSYLHGVRHLVHRD 207
G+L+ LR + K PE + ++ +G+ +L R +HRD
Sbjct: 117 KFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 175
Query: 208 IKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + + +M+PE I + Y+ +D+
Sbjct: 176 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 235
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 236 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 294
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 295 SQRPTFSELVEH 306
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 110 ALKKINIF-EKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSL 168
A+K++ + K+ E+ LC+ + ++ GA G + +A+EY G+L
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA--CEHRGYLYLAIEYAPHGNL 103
Query: 169 ADILRMQK--------SIPEPILSSMFKKLL--------QGLSYLHGVRHLVHRDIKPAN 212
D LR + +I S++ + L +G+ YL + +HRD+ N
Sbjct: 104 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-SQKQFIHRDLAARN 162
Query: 213 LLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
+LV KI DFG+S G E + + V +M+ E + Y+ +D+WS G+ L
Sbjct: 163 ILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 273 FE-CGTGEFPYAASEGPVNLMLQILEDPSPSPSR----QNFSPEFCSFVDDCLKKDAEAR 327
+E G PY + L + P R N E + C ++ R
Sbjct: 222 WEIVSLGGTPYCG------MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYER 275
Query: 328 PTADQLL 334
P+ Q+L
Sbjct: 276 PSFAQIL 282
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 160
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 161 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
Query: 275 C-GTGEFPYAASEG-PVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 221 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 273
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 114
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 173
Query: 208 IKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + + +M+PE I + Y+ +D+
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 292
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 293 SQRPTFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 114
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 173
Query: 208 IKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + + +M+PE I + Y+ +D+
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 292
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 293 SQRPTFSELVEH 304
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 180 EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL-----KGRPKITDFGISAGL-- 232
EPI ++ ++ GL++LH + ++VHRD+KP N+L+++ K + I+DFG+ L
Sbjct: 119 EPI--TLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 233 -ENSIAMCATFVGTVTYMSPERIR---NESYSYPADIWSIGLALFEC-GTGEFPYAAS-E 286
+S + + GT +++PE + E+ +Y DI+S G + G P+ S +
Sbjct: 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ 235
Query: 287 GPVNLMLQI--LEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYE 343
N++L L+ P + E ++ + D + RP+A +L HPF E
Sbjct: 236 RQANILLGACSLDCLHPEKHEDVIARE---LIEKMIAMDPQKRPSAKHVLKHPFFWSLE 291
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 162
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 163 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
Query: 275 C-GTGEFPYAASEG-PVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 223 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVT 162
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 163 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
Query: 275 C-GTGEFPYAASEG-PVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 223 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 275
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + +E+
Sbjct: 93 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFC 151
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 152 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 210
Query: 208 IKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + + +M+PE I + Y+ +D+
Sbjct: 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 270
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 271 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 329
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 330 SQRPTFSELVEH 341
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVT 504
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 505 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
Query: 275 C-GTGEFPYAASEGP-VNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 565 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 617
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 158 IALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL 217
+ +E + G L L+ + + + + + ++ G+ YL + VHRD+ N+L+
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVT 505
Query: 218 KGRPKITDFGISAGL---ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
+ KI+DFG+S L EN V + +PE I +S +D+WS G+ ++E
Sbjct: 506 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
Query: 275 C-GTGEFPYAASEGP-VNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
G+ PY +G V ML+ E P+ P E ++ C D E RP
Sbjct: 566 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR------EMYDLMNLCWTYDVENRP 618
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 29/269 (10%)
Query: 79 ASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRT------L 132
A +E+ IG G +V + + ++A+K + + + E +++ + + +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ 192
+ +V+ +G + P + +E++ G L L + K+ PI S+ +L+
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRL-LDKA--HPIKWSVKLRLML 129
Query: 193 ----GLSYLHGVRH-LVHRDIKPANLLV-----NLKGRPKITDFGISAGLENSIAMCATF 242
G+ Y+ +VHRD++ N+ + N K+ DFG+S + S+ +
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGL 186
Query: 243 VGTVTYMSPERI--RNESYSYPADIWSIGLALFECGTGEFPY-AASEGPVNLMLQILEDP 299
+G +M+PE I ESY+ AD +S + L+ TGE P+ S G + + I E+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 300 SPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
++ P + ++ C D + RP
Sbjct: 247 LRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 183 LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCA 240
L S ++ QG+ YL ++ LVHRD+ N+LV + KI+DFG+S + E+S +
Sbjct: 152 LISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDP 299
V +M+ E + + Y+ +D+WS G+ L+E T G PY P + +L+
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLFNLLKTG 268
Query: 300 SPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
N S E + C K++ + RP
Sbjct: 269 HRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 183 LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCA 240
L S ++ QG+ YL ++ LVHRD+ N+LV + KI+DFG+S + E+S +
Sbjct: 152 LISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDP 299
V +M+ E + + Y+ +D+WS G+ L+E T G PY P + +L+
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLFNLLKTG 268
Query: 300 SPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
N S E + C K++ + RP
Sbjct: 269 HRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + E+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVITEFC 105
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 164
Query: 208 IKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGTV--TYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + +M+PE I + Y+ +D+
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 283
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 284 SQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + E+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVITEFC 105
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 164
Query: 208 IKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + + +M+PE I + Y+ +D+
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 283
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 284 SQRPTFSELVEH 295
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 156 ISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ + +E GG L L ++ IP ++ + ++ G+ YL ++ VHR++ N+L
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE-KNFVHRNLAARNVL 468
Query: 215 VNLKGRPKITDFGISAGL-ENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLA 271
+ + KI+DFG+S L + A G + + +PE I +S +D+WS G+
Sbjct: 469 LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT 528
Query: 272 LFEC-GTGEFPYAASEGPVNLML----QILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEA 326
++E G+ PY +GP + + +E P P PE + + DC E
Sbjct: 529 MWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP------PELYALMSDCWIYKWED 582
Query: 327 RP 328
RP
Sbjct: 583 RP 584
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 23/252 (9%)
Query: 105 THRIIALKKINIFEKEKRNQ-LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYM 163
T R +A+K + ++ L++E++ L + +V GA P G + + E+
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GGPLMVITEFC 105
Query: 164 DGGSLADILRMQKS--IPEPIL-SSMFKKLL-------------QGLSYLHGVRHLVHRD 207
G+L+ LR +++ +P + ++K L +G+ +L R +HRD
Sbjct: 106 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRD 164
Query: 208 IKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADI 265
+ N+L++ K KI DFG++ + + + +M+PE I + Y+ +D+
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 266 WSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDA 324
WS G+ L+E G PY + + L++ + + +PE + DC +
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAPDYTTPEMYQTMLDCWHGEP 283
Query: 325 EARPTADQLLSH 336
RPT +L+ H
Sbjct: 284 SQRPTFSELVEH 295
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVE 143
IG G V +A H T + +ALKK+ + E EK +T +R + + +E +V
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 144 F------HGAFYMPDSGQISIALEYMD---GGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ Y G I + ++ + G L+++L ++ ++ E + + + LL GL
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSE--IKRVMQMLLNGL 138
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA------TFVGTVTY 248
Y+H + ++HRD+K AN+L+ G K+ DFG++ S+A + V T+ Y
Sbjct: 139 YYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAF--SLAKNSQPNRYXNRVVTLWY 195
Query: 249 MSPERIRNE-SYSYPADIWSIGLALFECGT 277
PE + E Y P D+W G + E T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 165
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 166 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 225
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 226 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 279
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 280 PSFSELVS 287
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 128/334 (38%), Gaps = 70/334 (20%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEA-------PC 137
+ +G G S V + I + +A+K + E L EIR L P
Sbjct: 25 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETAL-DEIRLLKSVRNSDPNDPN 83
Query: 138 NEGLVEFHGAFYMP--DSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGL 194
E +V+ F + + I + E + L I++ + +P P + + +++LQGL
Sbjct: 84 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGL 143
Query: 195 SYLHGVRHLVHRDIKPANLLVNLK-----------------GRPKITDFGIS-------- 229
YLH ++H DIKP N+L+++ G P + +S
Sbjct: 144 DYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGN 203
Query: 230 ------------------AGLENSIAMCATF---VGTVTYMSPERIRNESYSYPADIWSI 268
A L N+ + F + T Y S E + Y+ PADIWS
Sbjct: 204 FLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWST 263
Query: 269 GLALFECGTGEF--------PYAASEGPVNLMLQIL-EDPSPSPSRQNFSPEFCSFVDDC 319
FE TG++ Y E + L++++L + P +S EF + D
Sbjct: 264 ACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD- 322
Query: 320 LKKDAEARPTADQLLSHPFITKYEHAKVDLAAFV 353
LK + +P L + KYE ++ + A F
Sbjct: 323 LKHITKLKPWG---LFEVLVEKYEWSQEEAAGFT 353
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVE 143
IG G V +A H T + +ALKK+ + E EK +T +R + + +E +V
Sbjct: 22 LAKIGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVN 80
Query: 144 F------HGAFYMPDSGQISIALEYMD---GGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ Y G I + ++ + G L+++L ++ ++ E + + + LL GL
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSE--IKRVMQMLLNGL 137
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL---ENSIA-MCATFVGTVTYMS 250
Y+H + ++HRD+K AN+L+ G K+ DFG++ +NS V T+ Y
Sbjct: 138 YYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 251 PERIRNE-SYSYPADIWSIGLALFECGT 277
PE + E Y P D+W G + E T
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 166
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 167 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 226
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 227 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 280
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 281 PSFSELVS 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 154 GQISIALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPAN 212
G + L YM G L + +R + P L ++ +G+ YL + VHRD+ N
Sbjct: 100 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARN 158
Query: 213 LLVNLKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSI 268
+++ K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 269 GLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKD 323
G+ L+E T P ++ + +L+ R+ PE+C + C
Sbjct: 219 GVLLWELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPK 272
Query: 324 AEARPTADQLLS 335
AE RP+ +L+S
Sbjct: 273 AEMRPSFSELVS 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 167
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 168 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 228 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 281
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 282 PSFSELVS 289
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 126/339 (37%), Gaps = 71/339 (20%)
Query: 67 DESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLL 126
D+ + + + ++ + IG G V +A H+ +ALK + EK Q
Sbjct: 83 DQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAA 141
Query: 127 TEIRTL---CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK--SIPEP 181
EIR L + + + H I + E + +L ++++ K P
Sbjct: 142 EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLP 200
Query: 182 ILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRP--KITDFGISAGLENSIAMC 239
++ +LQ L LH R ++H D+KP N+L+ +GR K+ DFG S +
Sbjct: 201 LVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY-- 257
Query: 240 ATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGTGEFPYAASE---GPVNLMLQIL 296
+ + Y +PE I Y P D+WS+G L E TG +P E + M+++L
Sbjct: 258 -XXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELL 315
Query: 297 EDP-----SPSPSRQNFS-----PEFCS-------------------------------- 314
P S +NF P +C+
Sbjct: 316 GMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGN 375
Query: 315 ------------FVDDCLKKDAEARPTADQLLSHPFITK 341
F+ CL+ D R T Q L HP++ +
Sbjct: 376 ALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 90 GSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFY 149
G G VQ T +A+KK+ I + RN+ L ++ L + +V+ FY
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFRNRELQIMQDLA-VLHHPNIVQLQSYFY 89
Query: 150 M---PDSGQI--SIALEYMDGGSLADILR---MQKSIPEPILSSMFK-KLLQGLSYLH-G 199
D I ++ +EY+ +L R ++ P PIL +F +L++ + LH
Sbjct: 90 TLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP 148
Query: 200 VRHLVHRDIKPANLLVN-LKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERI-RNE 257
++ HRDIKP N+LVN G K+ DFG + L S A ++ + Y +PE I N+
Sbjct: 149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA-YICSRYYRAPELIFGNQ 207
Query: 258 SYSYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPS 300
Y+ DIWS+G E GE F S G ++ ++++L PS
Sbjct: 208 HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 120/277 (43%), Gaps = 32/277 (11%)
Query: 86 FG-AIGSGASSVVQRAVHIPTHRIIALKKINI------FEKEKRNQLLTEIRTLCEAPCN 138
FG +G+GA V A + A+ K+ + +++ L++E++ + +
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-----------SIPEPILSS-- 185
E +V GA G + + EY G L + LR ++ PE LSS
Sbjct: 110 ENIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 186 ---MFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN--SIAMCA 240
++ QG+++L ++ +HRD+ N+L+ KI DFG++ + N + +
Sbjct: 168 LLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDP 299
V +M+PE I + Y+ +D+WS G+ L+E G PY VN L
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--VNSKFYKLVKD 284
Query: 300 SPSPSRQNFSPE-FCSFVDDCLKKDAEARPTADQLLS 335
++ F+P+ S + C + RPT Q+ S
Sbjct: 285 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 321
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 167
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 168 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 228 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 281
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 282 PSFSELVS 289
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 128/334 (38%), Gaps = 70/334 (20%)
Query: 85 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEA-------PC 137
+ +G G S V + I + +A+K + E L EIR L P
Sbjct: 41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETAL-DEIRLLKSVRNSDPNDPN 99
Query: 138 NEGLVEFHGAFYMP--DSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGL 194
E +V+ F + + I + E + L I++ + +P P + + +++LQGL
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGL 159
Query: 195 SYLHGVRHLVHRDIKPANLLVNLK-----------------GRPKITDFGIS-------- 229
YLH ++H DIKP N+L+++ G P + +S
Sbjct: 160 DYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGN 219
Query: 230 ------------------AGLENSIAMCATF---VGTVTYMSPERIRNESYSYPADIWSI 268
A L N+ + F + T Y S E + Y+ PADIWS
Sbjct: 220 FLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWST 279
Query: 269 GLALFECGTGEF--------PYAASEGPVNLMLQIL-EDPSPSPSRQNFSPEFCSFVDDC 319
FE TG++ Y E + L++++L + P +S EF + D
Sbjct: 280 ACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD- 338
Query: 320 LKKDAEARPTADQLLSHPFITKYEHAKVDLAAFV 353
LK + +P L + KYE ++ + A F
Sbjct: 339 LKHITKLKPWG---LFEVLVEKYEWSQEEAAGFT 369
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 166
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 167 EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 226
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 227 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 280
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 281 PSFSELVS 288
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVE 143
IG G V +A H T + +ALKK+ + E EK +T +R + + +E +V
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 144 F------HGAFYMPDSGQISIALEYMD---GGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ Y G I + ++ + G L+++L ++ ++ E + + + LL GL
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSE--IKRVMQMLLNGL 138
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA------TFVGTVTY 248
Y+H + ++HRD+K AN+L+ G K+ DFG++ S+A + V T+ Y
Sbjct: 139 YYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAF--SLAKNSQPNRYXNRVVTLWY 195
Query: 249 MSPERIRNE-SYSYPADIWSIGLALFECGT 277
PE + E Y P D+W G + E T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 154 GQISIALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPAN 212
G + L YM G L + +R + P L ++ +G+ YL + VHRD+ N
Sbjct: 97 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARN 155
Query: 213 LLVNLKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSI 268
+++ K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 269 GLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKD 323
G+ L+E T P ++ + +L+ R+ PE+C + C
Sbjct: 216 GVLLWELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPK 269
Query: 324 AEARPTADQLLS 335
AE RP+ +L+S
Sbjct: 270 AEMRPSFSELVS 281
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 79 ASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRT------L 132
A +E+ IG G +V + + ++A+K + + + E +++ + + +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ 192
+ +V+ +G + P + +E++ G L L + K+ PI S+ +L+
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRL-LDKA--HPIKWSVKLRLML 129
Query: 193 ----GLSYLHGVRH-LVHRDIKPANLLV-----NLKGRPKITDFGISAGLENSIAMCATF 242
G+ Y+ +VHRD++ N+ + N K+ DFG S + S+ +
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGL 186
Query: 243 VGTVTYMSPERI--RNESYSYPADIWSIGLALFECGTGEFPY-AASEGPVNLMLQILEDP 299
+G +M+PE I ESY+ AD +S + L+ TGE P+ S G + + I E+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 300 SPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
++ P + ++ C D + RP
Sbjct: 247 LRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 127 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 185
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 186 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 245
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 246 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 299
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 300 PSFSELVS 307
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 164
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 165 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 224
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 225 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 278
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 279 PSFSELVS 286
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ YL + VHRD+ N +++
Sbjct: 128 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-ASKKFVHRDLAARNCMLD 186
Query: 217 LKGRPKITDFGISAGLEN----SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + + S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 187 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 246
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 247 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 300
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 301 PSFSELVS 308
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 110 ALKKINIF-EKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSL 168
A+K++ + K+ E+ LC+ + ++ GA G + +A+EY G+L
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA--CEHRGYLYLAIEYAPHGNL 110
Query: 169 ADILRMQK--------SIPEPILSSMFKKLL--------QGLSYLHGVRHLVHRDIKPAN 212
D LR + +I S++ + L +G+ YL + +HR++ N
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-SQKQFIHRNLAARN 169
Query: 213 LLVNLKGRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
+LV KI DFG+S G E + + V +M+ E + Y+ +D+WS G+ L
Sbjct: 170 ILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 273 FE-CGTGEFPYAASEGPVNLMLQILEDPSPSPSR----QNFSPEFCSFVDDCLKKDAEAR 327
+E G PY + L + P R N E + C ++ R
Sbjct: 229 WEIVSLGGTPYCG------MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYER 282
Query: 328 PTADQLL 334
P+ Q+L
Sbjct: 283 PSFAQIL 289
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 26/271 (9%)
Query: 86 FG-AIGSGASSVVQRAVHIPTHRIIALKKINI------FEKEKRNQLLTEIRTLCEAPCN 138
FG +G+GA V A + A+ K+ + +++ L++E++ + +
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR------MQKSIPEPI----LSSMFK 188
E +V GA G + + EY G L + LR + K P+ L
Sbjct: 110 ENIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN--SIAMCATFVGTV 246
++ QG+++L ++ +HRD+ N+L+ KI DFG++ + N + + V
Sbjct: 168 QVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+M+PE I + Y+ +D+WS G+ L+E G PY VN L ++
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI--LVNSKFYKLVKDGYQMAQ 284
Query: 306 QNFSPE-FCSFVDDCLKKDAEARPTADQLLS 335
F+P+ S + C + RPT Q+ S
Sbjct: 285 PAFAPKNIYSIMQACWALEPTHRPTFQQICS 315
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 183 LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCA 240
L S ++ QG+ YL + LVHRD+ N+LV + KI+DFG+S + E+S +
Sbjct: 152 LISFAWQISQGMQYLAEM-SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASEGPVNLMLQILEDP 299
V +M+ E + + Y+ +D+WS G+ L+E T G PY P + +L+
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLFNLLKTG 268
Query: 300 SPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
N S E + C K++ + RP
Sbjct: 269 HRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 21 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 79
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 80 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 137 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 253
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 254 ----LLELMRMCWQYNPKMRPSFLEIIS 277
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 26/271 (9%)
Query: 86 FG-AIGSGASSVVQRAVHIPTHRIIALKKINI------FEKEKRNQLLTEIRTLCEAPCN 138
FG +G+GA V A + A+ K+ + +++ L++E++ + +
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR------MQKSIPEPI----LSSMFK 188
E +V GA G + + EY G L + LR + K P+ L
Sbjct: 102 ENIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN--SIAMCATFVGTV 246
++ QG+++L ++ +HRD+ N+L+ KI DFG++ + N + + V
Sbjct: 160 QVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+M+PE I + Y+ +D+WS G+ L+E G PY VN L ++
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI--LVNSKFYKLVKDGYQMAQ 276
Query: 306 QNFSPE-FCSFVDDCLKKDAEARPTADQLLS 335
F+P+ S + C + RPT Q+ S
Sbjct: 277 PAFAPKNIYSIMQACWALEPTHRPTFQQICS 307
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 18/171 (10%)
Query: 138 NEGLVEFHGAFYMPDSGQ--ISIALEYMDG---GSLADILRMQKSIPEPILSSMFKKLLQ 192
N G+ H + + S +++ +EY+ L +R +SIP ++S +L +
Sbjct: 93 NNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFR 152
Query: 193 GLSYLHGVRHLVHRDIKPANLLVNLKGRP-KITDFGISAGL---ENSIA-MCATFVGTVT 247
+ ++H + + HRDIKP NLLVN K K+ DFG + L E S+A +C+ F
Sbjct: 153 AVGFIHSLG-ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF----- 206
Query: 248 YMSPERIRNES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILE 297
Y +PE + + Y+ D+WSIG E G+ P + E ++ +++I++
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGK-PLFSGETSIDQLVRIIQ 256
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 30/275 (10%)
Query: 56 LGLQKCTSWLADESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKIN 115
+ L K T+ +A ++ + + ++ IG+G+ VV +A + ++A+KK+
Sbjct: 3 MSLSKVTTVVATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKV- 58
Query: 116 IFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFY----MPDSGQISIALEYMDGGSLA-- 169
+ +K +N+ L +R L CN +V FY D +++ L+Y+
Sbjct: 59 LQDKRFKNRELQIMRKLDH--CN--IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 114
Query: 170 -DILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL-KGRPKITDFG 227
R ++++P + +L + L+Y+H + HRDIKP NLL++ K+ DFG
Sbjct: 115 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFG 173
Query: 228 ----ISAGLENSIAMCATFVGTVTYMSPERIRNES-YSYPADIWSIGLALFECGTGEFPY 282
+ G N +C+ + Y +PE I + Y+ D+WS G L E G+ +
Sbjct: 174 SAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
Query: 283 AASEGPVNL--MLQILEDPSPSPSRQNFSPEFCSF 315
G L ++++L P+ R+ +P + F
Sbjct: 229 PGDSGVDQLVEIIKVLGTPTREQIRE-MNPNYTEF 262
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 84 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGL 141
R +G G V +A+ T+ +A+K+I + E E+ T IR +L + + +
Sbjct: 37 RRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL-EHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 142 VEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
+E + + ++ + EY + L + + ++ S +L+ G+++ H R
Sbjct: 96 IELKSVIH--HNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS-R 151
Query: 202 HLVHRDIKPANLLVNLKGRP-----KITDFGISAGLENSIAMCATFVGTVTYMSPE-RIR 255
+HRD+KP NLL+++ KI DFG++ I + T+ Y PE +
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 256 NESYSYPADIWSIG 269
+ YS DIWSI
Sbjct: 212 SRHYSTSVDIWSIA 225
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 88
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 89 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 146 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 262
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 263 ----LFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ +L + VHRD+ N +++
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD 168
Query: 217 LKGRPKITDFGISAG-LENSIAMCATFVGT---VTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ L+ G V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 169 EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 229 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 282
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 283 PSFSELVS 290
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 23/234 (9%)
Query: 120 EKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIP 179
+++ L++E++ + +E +V GA G + + EY G L + LR + +
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 180 E-----PILSSMFK---------KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITD 225
E I +S ++ QG+++L ++ +HRD+ N+L+ KI D
Sbjct: 149 ETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGD 207
Query: 226 FGISAGLEN--SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPY 282
FG++ + N + + V +M+PE I + Y+ +D+WS G+ L+E G PY
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPE-FCSFVDDCLKKDAEARPTADQLLS 335
VN L ++ F+P+ S + C + RPT Q+ S
Sbjct: 268 PGI--LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 30/273 (10%)
Query: 58 LQKCTSWLADESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIF 117
L K T+ +A ++ + + ++ IG+G+ VV +A + ++A+KK+ +
Sbjct: 1 LSKVTTVVATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKV-LQ 56
Query: 118 EKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFY----MPDSGQISIALEYMDGGSLA---D 170
+K +N+ L +R L CN +V FY D +++ L+Y+
Sbjct: 57 DKRFKNRELQIMRKLDH--CN--IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 112
Query: 171 ILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNL-KGRPKITDFG-- 227
R ++++P + +L + L+Y+H + HRDIKP NLL++ K+ DFG
Sbjct: 113 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSA 171
Query: 228 --ISAGLENSIAMCATFVGTVTYMSPERIRNES-YSYPADIWSIGLALFECGTGEFPYAA 284
+ G N +C+ + Y +PE I + Y+ D+WS G L E G+ +
Sbjct: 172 KQLVRGEPNVSXICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 226
Query: 285 SEGPVNL--MLQILEDPSPSPSRQNFSPEFCSF 315
G L ++++L P+ R+ +P + F
Sbjct: 227 DSGVDQLVEIIKVLGTPTREQIRE-MNPNYTEF 258
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ +L + VHRD+ N +++
Sbjct: 114 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD 172
Query: 217 LKGRPKITDFGISAGLE----NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + +S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 173 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 232
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 233 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 286
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 287 PSFSELVS 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ +L + VHRD+ N +++
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD 165
Query: 217 LKGRPKITDFGISAGLE----NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + +S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 166 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 225
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 226 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 279
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 280 PSFSELVS 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ +L + VHRD+ N +++
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD 168
Query: 217 LKGRPKITDFGISAGLE----NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + +S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 169 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 229 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 282
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 283 PSFSELVS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ +L + VHRD+ N +++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD 167
Query: 217 LKGRPKITDFGISAGLE----NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + +S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 168 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 228 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 281
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 282 PSFSELVS 289
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ +L + VHRD+ N +++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD 167
Query: 217 LKGRPKITDFGISAGLE----NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + +S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 168 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 228 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 281
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 282 PSFSELVS 289
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 121 KRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK---- 176
+R L++E++ L + +V GA + G + EY G L + LR ++
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTI--GGPTLVITEYCCYGDLLNFLRRKRDSFI 126
Query: 177 -SIPEPIL-------------SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPK 222
S P + S ++ +G+++L ++ +HRD+ N+L+ K
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITK 185
Query: 223 ITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGE 279
I DFG++ ++N + + V +M+PE I N Y++ +D+WS G+ L+E G
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 280 FPYAASEGPVN-LMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
PY PV+ +++++ S ++ E + C D RPT Q++
Sbjct: 246 SPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 121 KRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK---- 176
+R L++E++ L + +V GA + G + EY G L + LR ++
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTI--GGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 177 -SIPEPIL-------------SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPK 222
S P + S ++ +G+++L ++ +HRD+ N+L+ K
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITK 208
Query: 223 ITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGE 279
I DFG++ ++N + + V +M+PE I N Y++ +D+WS G+ L+E G
Sbjct: 209 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 280 FPYAASEGPVN-LMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
PY PV+ +++++ S ++ E + C D RPT Q++
Sbjct: 269 SPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 158 IALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I EYM G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 163
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + ++S +D+W+ G+ L
Sbjct: 164 GENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNTFSIKSDVWAFGVLL 221
Query: 273 FECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPT 329
+E T G PY + ++ + +LE + P+ + C K RP+
Sbjct: 222 WEIATYGMSPYPGID--LSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPS 277
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 143
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 204 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 261
Query: 333 L 333
L
Sbjct: 262 L 262
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 121 KRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK---- 176
+R L++E++ L + +V GA + G + EY G L + LR ++
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTI--GGPTLVITEYCCYGDLLNFLRRKRDSFI 142
Query: 177 -SIPEPIL-------------SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPK 222
S P + S ++ +G+++L ++ +HRD+ N+L+ K
Sbjct: 143 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITK 201
Query: 223 ITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGE 279
I DFG++ ++N + + V +M+PE I N Y++ +D+WS G+ L+E G
Sbjct: 202 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 261
Query: 280 FPYAASEGPVN-LMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
PY PV+ +++++ S ++ E + C D RPT Q++
Sbjct: 262 SPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 143
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 144 VSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 204 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 261
Query: 333 L 333
L
Sbjct: 262 L 262
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 45/234 (19%)
Query: 138 NEGLVEFHGAFYMPDSGQISIAL--EYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLS 195
+E +++F GA S + + L + + GSL+D L+ + L + + + +GL+
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK-ANVVSWNELCHIAETMARGLA 135
Query: 196 YLH----GVRH-----LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF--VG 244
YLH G++ + HRDIK N+L+ I DFG++ E + T VG
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 245 TVTYMSPERIRNE-SYSYPA----DIWSIGLALFECGTGEFPYAASEGPVN-LMLQILED 298
T YM+PE + ++ A D++++GL L+E + A++GPV+ ML E+
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS---RCTAADGPVDEYMLPFEEE 252
Query: 299 PSPSPSRQNFS----------------------PEFCSFVDDCLKKDAEARPTA 330
PS ++ C +++C DAEAR +A
Sbjct: 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 121 KRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK---- 176
+R L++E++ L + +V GA + G + EY G L + LR ++
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTI--GGPTLVITEYCCYGDLLNFLRRKRDSFI 144
Query: 177 -SIPEPIL-------------SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPK 222
S P + S ++ +G+++L ++ +HRD+ N+L+ K
Sbjct: 145 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITK 203
Query: 223 ITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGE 279
I DFG++ ++N + + V +M+PE I N Y++ +D+WS G+ L+E G
Sbjct: 204 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 263
Query: 280 FPYAASEGPVN-LMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
PY PV+ +++++ S ++ E + C D RPT Q++
Sbjct: 264 SPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 23/234 (9%)
Query: 120 EKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIP 179
+++ L++E++ + +E +V GA G + + EY G L + LR + +
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 180 EPI--------------LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITD 225
E L ++ QG+++L ++ +HRD+ N+L+ KI D
Sbjct: 149 ETDPAFAIANSTASTRDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGD 207
Query: 226 FGISAGLEN--SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPY 282
FG++ + N + + V +M+PE I + Y+ +D+WS G+ L+E G PY
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Query: 283 AASEGPVNLMLQILEDPSPSPSRQNFSPE-FCSFVDDCLKKDAEARPTADQLLS 335
VN L ++ F+P+ S + C + RPT Q+ S
Sbjct: 268 PGI--LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 158 IALEYMDGGSLADILRMQKSIPE-PILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVN 216
+ L YM G L + +R + P L ++ +G+ +L + VHRD+ N +++
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLD 226
Query: 217 LKGRPKITDFGISAGLE----NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K K+ DFG++ + +S+ V +M+ E ++ + ++ +D+WS G+ L
Sbjct: 227 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286
Query: 273 FECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFC-----SFVDDCLKKDAEAR 327
+E T P ++ + +L+ R+ PE+C + C AE R
Sbjct: 287 WELMTRGAPPYPDVNTFDITVYLLQ------GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 340
Query: 328 PTADQLLS 335
P+ +L+S
Sbjct: 341 PSFSELVS 348
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 87
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 88 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 145 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 261
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 262 ----LFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 93
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 154 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 207
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 266
Query: 313 CSF 315
F
Sbjct: 267 TEF 269
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 88
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 89 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 146 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 262
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 263 ----LFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 89
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 150 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 203
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 262
Query: 313 CSF 315
F
Sbjct: 263 TEF 265
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 58 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 116
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 117 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 174 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 290
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 291 ----LFELMRMCWQYNPKMRPSFLEIIS 314
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 79 ASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRT------L 132
A +E+ IG G +V + + ++A+K + + + E +++ + + +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQ 192
+ +V+ +G + P + +E++ G L L + K+ PI S+ +L+
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRL-LDKA--HPIKWSVKLRLML 129
Query: 193 ----GLSYLHGVRH-LVHRDIKPANLLV-----NLKGRPKITDFGISAGLENSIAMCATF 242
G+ Y+ +VHRD++ N+ + N K+ DF +S + S+ +
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGL 186
Query: 243 VGTVTYMSPERI--RNESYSYPADIWSIGLALFECGTGEFPY-AASEGPVNLMLQILEDP 299
+G +M+PE I ESY+ AD +S + L+ TGE P+ S G + + I E+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 300 SPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
++ P + ++ C D + RP
Sbjct: 247 LRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 100
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 161 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 214
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 273
Query: 313 CSF 315
F
Sbjct: 274 TEF 276
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 523
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 524 VSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 584 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 641
Query: 333 L 333
L
Sbjct: 642 L 642
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 87
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 88 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 145 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 261
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 262 ----LFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 121 KRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK---- 176
+R L++E++ L + +V GA + G + EY G L + LR ++
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTI--GGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 177 -SIPEPIL-------------SSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPK 222
S P + S ++ +G+++L ++ +HRD+ N+L+ K
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITK 208
Query: 223 ITDFGISAGLEN--SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGE 279
I DFG++ ++N + + V +M+PE I N Y++ +D+WS G+ L+E G
Sbjct: 209 ICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 280 FPYAASEGPVN-LMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLL 334
PY PV+ +++++ S ++ E + C D RPT Q++
Sbjct: 269 SPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 81
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 82 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 139 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 255
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 256 ----LFELMRMCWQYNPKMRPSFLEIIS 279
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 93
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 154 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 207
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 266
Query: 313 CSF 315
F
Sbjct: 267 TEF 269
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 85
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 146 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 199
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 258
Query: 313 CSF 315
F
Sbjct: 259 TEF 261
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 94
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 95 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 152 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 268
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 269 ----LFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 143
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 204 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 261
Query: 333 L 333
L
Sbjct: 262 L 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 140
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 141 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 200
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 201 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 258
Query: 333 L 333
L
Sbjct: 259 L 259
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 27 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 85
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 86 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 143 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 259
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 260 ----LFELMRMCWQYNPKMRPSFLEIIS 283
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 26 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 84
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILRMQKS-------IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR + + P LS M + ++ G+
Sbjct: 85 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 142 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 258
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 259 ----LFELMRMCWQYNPKMRPSFLEIIS 282
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 143
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 144 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 203
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 204 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 261
Query: 333 L 333
L
Sbjct: 262 L 262
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 94
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILRMQKS-------IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR + + P LS M + ++ G+
Sbjct: 95 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N +V KI DFG++ + + G V +MSPE
Sbjct: 152 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 268
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 269 ----LFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 81
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 195
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 254
Query: 313 CSF 315
F
Sbjct: 255 TEF 257
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 148
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 149 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 208
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 209 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 266
Query: 333 L 333
L
Sbjct: 267 L 267
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 86 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR--TLCEAPCNEGLVE 143
IG G V +A H T + +ALKK+ + E EK +T +R + + +E +V
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 144 F------HGAFYMPDSGQISIALEYMD---GGSLADILRMQKSIPEPILSSMFKKLLQGL 194
+ Y I + ++ + G L+++L ++ ++ E + + + LL GL
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-VKFTLSE--IKRVMQMLLNGL 138
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCA------TFVGTVTY 248
Y+H + ++HRD+K AN+L+ G K+ DFG++ S+A + V T+ Y
Sbjct: 139 YYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAF--SLAKNSQPNRYXNRVVTLWY 195
Query: 249 MSPERIRNE-SYSYPADIWSIGLALFECGT 277
PE + E Y P D+W G + E T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 81
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 195
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 254
Query: 313 CSF 315
F
Sbjct: 255 TEF 257
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 115
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 176 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 229
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 288
Query: 313 CSF 315
F
Sbjct: 289 TEF 291
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 146
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 147 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 206
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 207 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 264
Query: 333 L 333
L
Sbjct: 265 L 265
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 94
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 155 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 208
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 267
Query: 313 CSF 315
F
Sbjct: 268 TEF 270
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 145
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 146 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 205
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 206 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 263
Query: 333 L 333
L
Sbjct: 264 L 264
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 109
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 170 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 223
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 282
Query: 313 CSF 315
F
Sbjct: 283 TEF 285
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 523
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 524 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 584 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 641
Query: 333 L 333
L
Sbjct: 642 L 642
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 156 ISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ I +E G L L+++K S+ L +L L+YL R VHRDI N+L
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVL 171
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT-VTYMSPERIRNESYSYPADIWSIGLALF 273
V+ K+ DFG+S +E+S A+ + +M+PE I ++ +D+W G+ ++
Sbjct: 172 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 231
Query: 274 ECGT-GEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQ 332
E G P+ + N ++ +E+ P N P S + C D RP +
Sbjct: 232 EILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 289
Query: 333 L 333
L
Sbjct: 290 L 290
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK---KLLQGL 194
+E +V++ G I + +E++ GSL + L K+ + L K ++ +G+
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGM 139
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCAT---FVGTVTYMSP 251
YL G R VHRD+ N+LV + + KI DFG++ +E V + +P
Sbjct: 140 DYL-GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASE-GPVNLMLQIL 296
E + + +D+WS G+ L E T Y S+ P+ L L+++
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT----YCDSDSSPMALFLKMI 240
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFK---KLLQGL 194
+E +V++ G I + +E++ GSL + L K+ + L K ++ +G+
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGM 127
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCAT---FVGTVTYMSP 251
YL G R VHRD+ N+LV + + KI DFG++ +E V + +P
Sbjct: 128 DYL-GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 252 ERIRNESYSYPADIWSIGLALFECGTGEFPYAASE-GPVNLMLQIL 296
E + + +D+WS G+ L E T Y S+ P+ L L+++
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT----YCDSDSSPMALFLKMI 228
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 81
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 195
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 254
Query: 313 CSF 315
F
Sbjct: 255 TEF 257
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 81
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 195
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 254
Query: 313 CSF 315
F
Sbjct: 255 TEF 257
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 115
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 176 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 229
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 288
Query: 313 CSF 315
F
Sbjct: 289 TEF 291
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 117
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 178 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 231
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 290
Query: 313 CSF 315
F
Sbjct: 291 TEF 293
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 177 SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV----NLKGRPKITDFGISAGL 232
+P ++ S+ ++L G+ YLH ++HRD+KPAN+LV +GR KI D G A L
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVKIADMGF-ARL 181
Query: 233 ENS----IAMCATFVGTVTYMSPERIRN-ESYSYPADIWSIGLALFECGTGE 279
NS +A V T Y +PE + Y+ DIW+IG E T E
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYF 160
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 221 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 274
Query: 256 NES-YSYPADIWSIGLALFECGTGE--FPYAASEGPVNLMLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ FP + + ++++L P+ R+ +P +
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 333
Query: 313 CSF 315
F
Sbjct: 334 TEF 336
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 27/242 (11%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAF 148
IG+G+ VV +A + ++A+KK+ + +K +N+ L +R L CN +V F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDH--CN--IVRLRYFF 120
Query: 149 Y----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGVR 201
Y D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 179
Query: 202 HLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIRN 256
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 180 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFG 234
Query: 257 ES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEFC 313
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNYT 293
Query: 314 SF 315
F
Sbjct: 294 EF 295
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + K +N+ L +R L CN +V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNRELQIMRKLDH--CN--IVRLRYF 81
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 195
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 254
Query: 313 CSF 315
F
Sbjct: 255 TEF 257
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 87 GAIGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKRNQLLTEIRTLCEAPCNEGLVEFH 145
G+ G V + V +A+K +N +R + L E + E C+ +V
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH-VVRLL 81
Query: 146 GAFYMPDSGQIS-IALEYMDGGSLADILR-----MQKS--IPEPILSSMFK---KLLQGL 194
G GQ + + +E M G L LR M+ + + P LS M + ++ G+
Sbjct: 82 GVV---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 195 SYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPE 252
+YL+ VHRD+ N V KI DFG++ + + G V +MSPE
Sbjct: 139 AYLNA-NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 253 RIRNESYSYPADIWSIGLALFECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQN 307
+++ ++ +D+WS G+ L+E T E PY ++E + +++ +L+ P P
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-- 255
Query: 308 FSPEFCSFVDDCLKKDAEARPTADQLLS 335
+ C + + + RP+ +++S
Sbjct: 256 ----LLELMRMCWQYNPKMRPSFLEIIS 279
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
Query: 108 IIALKKINIFEKEKRN--QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDG 165
++A+K + + R Q E+ T+ + ++ +V F G + + + EYM
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQ---HQHIVRFFGV--CTEGRPLLMVFEYMRH 98
Query: 166 GSLADILRM-----------QKSIPEPI----LSSMFKKLLQGLSYLHGVRHLVHRDIKP 210
G L LR + P P+ L ++ ++ G+ YL G+ H VHRD+
Sbjct: 99 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLAT 157
Query: 211 ANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTVTYMSPERIRNESYSYPADIWSI 268
N LV KI DFG+S + ++ + + + +M PE I ++ +D+WS
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 217
Query: 269 GLALFECGT-GEFPY--AASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKD 323
G+ L+E T G+ P+ ++ ++ + Q LE P P PE + + C +++
Sbjct: 218 GVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP------PEVYAIMRGCWQRE 271
Query: 324 AEAR 327
+ R
Sbjct: 272 PQQR 275
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 84 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 142
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 143 GENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 201 WEIATYGMSPY 211
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 158 IALEYMDGGSLADILRM-----------QKSIPEPI----LSSMFKKLLQGLSYLHGVRH 202
+ EYM G L LR + P P+ L ++ ++ G+ YL G+ H
Sbjct: 97 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-H 155
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTVTYMSPERIRNESYS 260
VHRD+ N LV KI DFG+S + ++ + + + +M PE I ++
Sbjct: 156 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 215
Query: 261 YPADIWSIGLALFECGT-GEFPY--AASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSF 315
+D+WS G+ L+E T G+ P+ ++ ++ + Q LE P P PE +
Sbjct: 216 TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP------PEVYAI 269
Query: 316 VDDCLKKDAEAR 327
+ C +++ + R
Sbjct: 270 MRGCWQREPQQR 281
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 144
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 203 WEIATYGMSPY 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 49/289 (16%)
Query: 86 FGAI-GSGASSVVQRAVHIPTHRI-----IALKKINIFEKEK-----RNQLLTEIRTLCE 134
FG + GSGA V A + +A+K + KEK R L++E++ + +
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML----KEKADSSEREALMSELKMMTQ 104
Query: 135 APCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM--------------QKSIPE 180
+E +V GA + SG I + EY G L + LR QK + E
Sbjct: 105 LGSHENIVNLLGACTL--SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 181 P----ILSSMFKKLL-------QGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGIS 229
+L+ F+ LL +G+ +L + VHRD+ N+LV KI DFG++
Sbjct: 163 EEDLNVLT--FEDLLCFAYQVAKGMEFLE-FKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 230 AGL--ENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPYAASE 286
+ +++ + V +M+PE + Y+ +D+WS G+ L+E + G PY
Sbjct: 220 RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 287 GPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLS 335
N +++++ + E + C D+ RP+ L S
Sbjct: 280 VDANF-YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 327
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
Query: 108 IIALKKINIFEKEKRN--QLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDG 165
++A+K + + R Q E+ T+ + ++ +V F G + + + EYM
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQ---HQHIVRFFGV--CTEGRPLLMVFEYMRH 127
Query: 166 GSLADILRM-----------QKSIPEPI----LSSMFKKLLQGLSYLHGVRHLVHRDIKP 210
G L LR + P P+ L ++ ++ G+ YL G+ H VHRD+
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLAT 186
Query: 211 ANLLVNLKGRPKITDFGISAGLENS--IAMCATFVGTVTYMSPERIRNESYSYPADIWSI 268
N LV KI DFG+S + ++ + + + +M PE I ++ +D+WS
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 246
Query: 269 GLALFECGT-GEFPY--AASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKD 323
G+ L+E T G+ P+ ++ ++ + Q LE P P PE + + C +++
Sbjct: 247 GVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP------PEVYAIMRGCWQRE 300
Query: 324 AEAR 327
+ R
Sbjct: 301 PQQR 304
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 32/241 (13%)
Query: 109 IALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMP--DSGQIS-IALEYMDG 165
+A+K +N + L I L EA +G H + GQ + + +E M
Sbjct: 47 VAVKTVN-----ESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 101
Query: 166 GSLADILRMQK-------SIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLV 215
G L LR + P P L M + ++ G++YL+ + VHRD+ N +V
Sbjct: 102 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 160
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALF 273
KI DFG++ + + G V +M+PE +++ ++ +D+WS G+ L+
Sbjct: 161 AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 220
Query: 274 ECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
E + E PY ++E + ++ L+ P P R + C + + + RP
Sbjct: 221 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER------VTDLMRMCWQFNPKMRP 274
Query: 329 T 329
T
Sbjct: 275 T 275
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 144
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 203 WEIATYGMSPY 213
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 28/266 (10%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLT--EIRTLCEAPCNEGLVEFHG 146
+G G +V R V + + K + + + +Q+L EI L A + ++ H
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIAR-HRNILHLHE 68
Query: 147 AFYMPDSGQISIALEYMDGGSLADILRMQKS---IPEPILSSMFKKLLQGLSYLHGVRHL 203
+F ++ + E++ G + + R+ S + E + S ++ + L +LH ++
Sbjct: 69 SF--ESMEELVMIFEFISGLDIFE--RINTSAFELNEREIVSYVHQVCEALQFLHS-HNI 123
Query: 204 VHRDIKPANLLVNLK--GRPKITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSY 261
H DI+P N++ + KI +FG + L+ F Y +PE +++ S
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP-EYYAPEVHQHDVVST 182
Query: 262 PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSP------SRQNFSPEFCSF 315
D+WS+G ++ +G P+ A QI+E+ + + + S E F
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIENIMNAEYTFDEEAFKEISIEAMDF 237
Query: 316 VDDCLKKDAEARPTADQLLSHPFITK 341
VD L K+ ++R TA + L HP++ +
Sbjct: 238 VDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 23/163 (14%)
Query: 138 NEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPIL------------SS 185
+E +V+F+G D + + EYM G L LR P+ +L S
Sbjct: 74 HEHIVKFYGVCVEGDP--LIMVFEYMKHGDLNKFLRAHG--PDAVLMAEGNPPTELTQSQ 129
Query: 186 MF---KKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLENS--IAMCA 240
M +++ G+ YL +H VHRD+ N LV KI DFG+S + ++ +
Sbjct: 130 MLHIAQQIAAGMVYL-ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 241 TFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEFPY 282
+ + +M PE I ++ +D+WS+G+ L+E T G+ P+
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + K +N+ L +R L CN +V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNRELQIMRKLDH--CN--IVRLRYF 81
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 195
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 254
Query: 313 CSF 315
F
Sbjct: 255 TEF 257
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 134/345 (38%), Gaps = 89/345 (25%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHG 146
IG G+ V A T + +A+KK+N +FE ++L EI T+ ++ ++ +
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREI-TILNRLKSDYIIRLYD 92
Query: 147 AFYMPDS----GQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRH 202
+PD ++ I LE D L + + + E + ++ LL G +++H
Sbjct: 93 LI-IPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE-SG 149
Query: 203 LVHRDIKPANLLVNLKGRPKITDFGISAGL----------------------ENSIAMCA 240
++HRD+KPAN L+N K+ DFG++ + +N
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209
Query: 241 TFVGTVTYMSPERI-RNESYSYPADIWSIGLALFEC-------------------GTGEF 280
+ V T Y +PE I E+Y+ DIWS G E G+ F
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCF 269
Query: 281 PYA-----------ASEGPVNLMLQILEDPSPS-----------------PSRQ--NFSP 310
P + ++ +N++ I+ P+ P R+ N
Sbjct: 270 PLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQ 329
Query: 311 EFCSFVDD-------CLKKDAEARPTADQLLSHPFITKYEHAKVD 348
++ S DD LK + R T DQ L HP++ K++
Sbjct: 330 KYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 87 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 145
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 146 GENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 203
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 204 WEIATYGMSPY 214
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 88 AIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ VV +A + ++A+KK+ + K +N+ L +R L CN +V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNRELQIMRKLDH--CN--IVRLRYF 81
Query: 148 FY----MPDSGQISIALEYMDGGSLA---DILRMQKSIPEPILSSMFKKLLQGLSYLHGV 200
FY D +++ L+Y+ R ++++P + +L + L+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 RHLVHRDIKPANLLVNL-KGRPKITDFG----ISAGLENSIAMCATFVGTVTYMSPERIR 255
+ HRDIKP NLL++ K+ DFG + G N +C+ + Y +PE I
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 195
Query: 256 NES-YSYPADIWSIGLALFECGTGEFPYAASEGPVNL--MLQILEDPSPSPSRQNFSPEF 312
+ Y+ D+WS G L E G+ + G L ++++L P+ R+ +P +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-MNPNY 254
Query: 313 CSF 315
F
Sbjct: 255 TEF 257
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 32/241 (13%)
Query: 109 IALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMP--DSGQIS-IALEYMDG 165
+A+K +N + L I L EA +G H + GQ + + +E M
Sbjct: 50 VAVKTVN-----ESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 166 GSLADILRMQK-------SIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLV 215
G L LR + P P L M + ++ G++YL+ + VHRD+ N +V
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 163
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALF 273
KI DFG++ + + G V +M+PE +++ ++ +D+WS G+ L+
Sbjct: 164 AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 274 ECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
E + E PY ++E + ++ L+ P P R + C + + + RP
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER------VTDLMRMCWQFNPKMRP 277
Query: 329 T 329
T
Sbjct: 278 T 278
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 120 EKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRM----- 174
++ +LLT ++ +E +V+F+G D + + EYM G L LR
Sbjct: 65 QREAELLTNLQ-------HEHIVKFYGV--CGDGDPLIMVFEYMKHGDLNKFLRAHGPDA 115
Query: 175 --------QKSIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKI 223
+++ E LS M ++ G+ YL +H VHRD+ N LV KI
Sbjct: 116 MILVDGQPRQAKGELGLSQMLHIASQIASGMVYL-ASQHFVHRDLATRNCLVGANLLVKI 174
Query: 224 TDFGISAGLENS--IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEF 280
DFG+S + ++ + + + +M PE I ++ +D+WS G+ L+E T G+
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
Query: 281 PY 282
P+
Sbjct: 235 PW 236
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 113/285 (39%), Gaps = 54/285 (18%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
I LKKI EK+K N+ L + + FHG + IA E + G +
Sbjct: 99 INVLKKIK--EKDKENKFLCVLMS--------DWFNFHG--------HMCIAFELL-GKN 139
Query: 168 LADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL-VNLKGRP--- 221
+ L+ P P+ + M +L L +LH L H D+KP N+L VN +
Sbjct: 140 TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENILFVNSEFETLYN 198
Query: 222 ---------------KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
++ DFG SA ++ T V T Y PE I ++ P D+W
Sbjct: 199 EHKSCEEKSVKNTSIRVADFG-SATFDHEHH--TTIVATRHYRPPEVILELGWAQPCDVW 255
Query: 267 SIGLALFECGTGEFPYAASEGPVNL-MLQILEDPSPS-----PSRQNFSPEFCSFVDDCL 320
SIG LFE G + E +L M++ + P PS +Q + + D+
Sbjct: 256 SIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENS 315
Query: 321 KKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSV--FDPMQRM 363
+ L S+ EH V L +R + FDP QR+
Sbjct: 316 SDGRYVKENCKPLKSYMLQDSLEH--VQLFDLMRRMLEFDPAQRI 358
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
I LKKI EK+K N+ L + + FHG + IA E + G +
Sbjct: 67 INVLKKIK--EKDKENKFLCVLMS--------DWFNFHG--------HMCIAFELL-GKN 107
Query: 168 LADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL-VNLKGRP--- 221
+ L+ P P+ + M +L L +LH L H D+KP N+L VN +
Sbjct: 108 TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENILFVNSEFETLYN 166
Query: 222 ---------------KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
++ DFG SA ++ T V T Y PE I ++ P D+W
Sbjct: 167 EHKSCEEKSVKNTSIRVADFG-SATFDHEHH--TTIVATRHYRPPEVILELGWAQPCDVW 223
Query: 267 SIGLALFECGTGEFPYAASEGPVNL-MLQILEDPSPS 302
SIG LFE G + E +L M++ + P PS
Sbjct: 224 SIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPS 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I +E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 91 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 149
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 150 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 208 WEIATYGMSPY 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 32/241 (13%)
Query: 109 IALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMP--DSGQIS-IALEYMDG 165
+A+K +N + L I L EA +G H + GQ + + +E M
Sbjct: 50 VAVKTVN-----ESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 166 GSLADILRMQK-------SIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLV 215
G L LR + P P L M + ++ G++YL+ + VHRD+ N +V
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 163
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALF 273
KI DFG++ + + G V +M+PE +++ ++ +D+WS G+ L+
Sbjct: 164 AHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 274 ECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
E + E PY ++E + ++ L+ P P R + C + + + RP
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER------VTDLMRMCWQFNPKMRP 277
Query: 329 T 329
T
Sbjct: 278 T 278
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 108 IIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS 167
I LKKI EK+K N+ L + + FHG + IA E + G +
Sbjct: 76 INVLKKIK--EKDKENKFLCVLMS--------DWFNFHG--------HMCIAFELL-GKN 116
Query: 168 LADILRMQKSIPEPI--LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL-VNLKGRP--- 221
+ L+ P P+ + M +L L +LH L H D+KP N+L VN +
Sbjct: 117 TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENILFVNSEFETLYN 175
Query: 222 ---------------KITDFGISAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIW 266
++ DFG SA ++ T V T Y PE I ++ P D+W
Sbjct: 176 EHKSCEEKSVKNTSIRVADFG-SATFDHEHH--TTIVATRHYRPPEVILELGWAQPCDVW 232
Query: 267 SIGLALFECGTGEFPYAASEGPVNL-MLQILEDPSPS 302
SIG LFE G + E +L M++ + P PS
Sbjct: 233 SIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPS 269
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 32/241 (13%)
Query: 109 IALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMP--DSGQIS-IALEYMDG 165
+A+K +N + L I L EA +G H + GQ + + +E M
Sbjct: 50 VAVKTVN-----ESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 166 GSLADILRMQK-------SIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLV 215
G L LR + P P L M + ++ G++YL+ + VHRD+ N +V
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 163
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALF 273
KI DFG++ + + G V +M+PE +++ ++ +D+WS G+ L+
Sbjct: 164 AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 274 ECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
E + E PY ++E + ++ L+ P P R + C + + RP
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER------VTDLMRMCWQFNPNMRP 277
Query: 329 T 329
T
Sbjct: 278 T 278
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 142
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 143 GENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 201 WEIATYGMSPY 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 142
Query: 216 NLKGRPKITDFGISAGLE-NSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFE 274
K+ DFG+S + ++ A + + +PE + +S +D+W+ G+ L+E
Sbjct: 143 GENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 275 CGT-GEFPY 282
T G PY
Sbjct: 203 IATYGMSPY 211
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTV 246
++ +G+ +L R +HRD+ N+L++ K KI DFG++ + + +
Sbjct: 199 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+M+PE I + Y+ +D+WS G+ L+E G PY + + L++ + +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAP 316
Query: 306 QNFSPEFCSFVDDCLKKDAEARPTADQLLSH 336
+PE + DC + RPT +L+ H
Sbjct: 317 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTV 246
++ +G+ +L R +HRD+ N+L++ K KI DFG++ + + +
Sbjct: 206 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+M+PE I + Y+ +D+WS G+ L+E G PY + + L++ + +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAP 323
Query: 306 QNFSPEFCSFVDDCLKKDAEARPTADQLLSH 336
+PE + DC + RPT +L+ H
Sbjct: 324 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTV 246
++ +G+ +L R +HRD+ N+L++ K KI DFG++ + + +
Sbjct: 201 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+M+PE I + Y+ +D+WS G+ L+E G PY + + L++ + +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAP 318
Query: 306 QNFSPEFCSFVDDCLKKDAEARPTADQLLSH 336
+PE + DC + RPT +L+ H
Sbjct: 319 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 32/241 (13%)
Query: 109 IALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMP--DSGQIS-IALEYMDG 165
+A+K +N + L I L EA +G H + GQ + + +E M
Sbjct: 50 VAVKTVN-----ESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 166 GSLADILRMQK-------SIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLV 215
G L LR + P P L M + ++ G++YL+ + VHRD+ N +V
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 163
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALF 273
KI DFG++ + + G V +M+PE +++ ++ +D+WS G+ L+
Sbjct: 164 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 274 ECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
E + E PY ++E + ++ L+ P P R + C + + + RP
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER------VTDLMRMCWQFNPKMRP 277
Query: 329 T 329
T
Sbjct: 278 T 278
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 144
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 203 WEIATYGMSPY 213
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 189 KLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGL--ENSIAMCATFVGTV 246
++ +G+ +L R +HRD+ N+L++ K KI DFG++ + + +
Sbjct: 208 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 247 TYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLMLQILEDPSPSPSR 305
+M+PE I + Y+ +D+WS G+ L+E G PY + + L++ + +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMRAP 325
Query: 306 QNFSPEFCSFVDDCLKKDAEARPTADQLLSH 336
+PE + DC + RPT +L+ H
Sbjct: 326 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 149
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 150 GENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 208 WEIATYGMSPY 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 144
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 203 WEIATYGMSPY 213
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 149
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 150 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 208 WEIATYGMSPY 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 156 ISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
I I +E + GG LR + + + L M G+ YL + +HRD+ N L
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES-KCCIHRDLAARNCL 245
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLAL 272
V K KI+DFG+S + + + + V + +PE + YS +D+WS G+ L
Sbjct: 246 VTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305
Query: 273 FEC-GTGEFPY 282
+E G PY
Sbjct: 306 WETFSLGASPY 316
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 39/284 (13%)
Query: 86 FG-AIGSGASSVVQRAVHIPTHRIIALKKINI------FEKEKRNQLLTEIRTLCEAPCN 138
FG +G+GA V A + A+ K+ + +++ L++E++ + +
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 139 EGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-------------------MQKSIP 179
E +V GA G + + EY G L + LR + K
Sbjct: 95 ENIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 180 EPI----LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKITDFGISAGLEN- 234
P+ L ++ QG+++L ++ +HRD+ N+L+ KI DFG++ + N
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 235 -SIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFEC-GTGEFPYAASEGPVNLM 292
+ + V +M+PE I + Y+ +D+WS G+ L+E G PY VN
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--VNSK 269
Query: 293 LQILEDPSPSPSRQNFSPE-FCSFVDDCLKKDAEARPTADQLLS 335
L ++ F+P+ S + C + RPT Q+ S
Sbjct: 270 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 313
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 99 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 157
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 158 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 215
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 216 WEIATYGMSPY 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 146
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 147 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 204
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 205 WEIATYGMSPY 215
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 149
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 150 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 208 WEIATYGMSPY 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 144
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 203 WEIATYGMSPY 213
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 146
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 147 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 204
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 205 WEIATYGMSPY 215
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 32/241 (13%)
Query: 109 IALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMP--DSGQIS-IALEYMDG 165
+A+K +N + L I L EA +G H + GQ + + +E M
Sbjct: 49 VAVKTVN-----ESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 103
Query: 166 GSLADILRMQK-------SIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLV 215
G L LR + P P L M + ++ G++YL+ + VHRD+ N +V
Sbjct: 104 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 162
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALF 273
KI DFG++ + + G V +M+PE +++ ++ +D+WS G+ L+
Sbjct: 163 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 222
Query: 274 ECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
E + E PY ++E + ++ L+ P P R + C + + + RP
Sbjct: 223 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER------VTDLMRMCWQFNPKMRP 276
Query: 329 T 329
T
Sbjct: 277 T 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 87 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 145
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 146 GENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 203
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 204 WEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 146
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 147 GENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 204
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 205 WEIATYGMSPY 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 156 ISIALEYMDGGSLADILRMQKS-IPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
I I +E + GG LR + + + L M G+ YL + +HRD+ N L
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES-KCCIHRDLAARNCL 245
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFVGT----VTYMSPERIRNESYSYPADIWSIGL 270
V K KI+DFG+S E + + A G V + +PE + YS +D+WS G+
Sbjct: 246 VTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGI 303
Query: 271 ALFEC-GTGEFPY 282
L+E G PY
Sbjct: 304 LLWETFSLGASPY 316
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 149
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 150 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 208 WEIATYGMSPY 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 90 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 148
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 149 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 206
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 207 WEIATYGMSPY 217
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILRM--QKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HRD+ N LV
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLV 144
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 203 WEIATYGMSPY 213
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 158 IALEYMDGGSLADIL----RMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I EY +GGSLAD + R+ E L + ++ +GL Y+H + LVH DIKP+N+
Sbjct: 86 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNI 144
Query: 214 LVNLKGRPKITDFGISAGLENSIAMCATF-----VGTVTYMSPERIR------------N 256
++ R I + G E+ A +G VT +S ++
Sbjct: 145 FIS---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ 201
Query: 257 ESYSY--PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS 314
E+Y++ ADI+++ L + C G P + + + Q P Q S EF
Sbjct: 202 ENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIP----QVLSQEFTE 256
Query: 315 FVDDCLKKDAEARPTADQLLSHPFI 339
+ + D E RP+A L+ H +
Sbjct: 257 LLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 158 IALEYMDGGSLADIL----RMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I EY +GGSLAD + R+ E L + ++ +GL Y+H + LVH DIKP+N+
Sbjct: 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNI 146
Query: 214 LVNLKGRPKITDFGISAGLENSIAMCATF-----VGTVTYMSPERIR------------N 256
++ R I + G E+ A +G VT +S ++
Sbjct: 147 FIS---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ 203
Query: 257 ESYSY--PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS 314
E+Y++ ADI+++ L + C G P + + + Q P Q S EF
Sbjct: 204 ENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIP----QVLSQEFTE 258
Query: 315 FVDDCLKKDAEARPTADQLLSHPFI 339
+ + D E RP+A L+ H +
Sbjct: 259 LLKVMIHPDPERRPSAMALVKHSVL 283
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 108 IIALKKINIFEKEKRNQ-----LLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEY 162
++A+K++ KE+R Q TE+ + A + L+ G F M + ++ + Y
Sbjct: 64 LVAVKRL----KEERXQGGELQFQTEVEMISMA-VHRNLLRLRG-FCMTPTERL-LVYPY 116
Query: 163 MDGGSLADILRMQKSIPEPILSSMFKKLL----QGLSYLHGVRH----LVHRDIKPANLL 214
M GS+A LR + P+ +++ +GL+YLH H ++HRD+K AN+L
Sbjct: 117 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD--HCDPKIIHRDVKAANIL 174
Query: 215 VNLKGRPKITDFGISAGLENSIAMCATFV-GTVTYMSPERIRNESYSYPADIWSIGLALF 273
++ + + DFG++ ++ V GT+ +++PE + S D++ G+ L
Sbjct: 175 LDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLL 234
Query: 274 ECGTGEFPY 282
E TG+ +
Sbjct: 235 ELITGQRAF 243
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 158 IALEYMDGGSLADIL----RMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANL 213
I EY +GGSLAD + R+ E L + ++ +GL Y+H + LVH DIKP+N+
Sbjct: 86 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNI 144
Query: 214 LVNLKGRPKITDFGISAGLENSIAMCATF-----VGTVTYMSPERIR------------N 256
++ R I + G E+ A +G VT +S ++
Sbjct: 145 FIS---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ 201
Query: 257 ESYSY--PADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCS 314
E+Y++ ADI+++ L + C G P + + + Q P Q S EF
Sbjct: 202 ENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIP----QVLSQEFTE 256
Query: 315 FVDDCLKKDAEARPTADQLLSHPFI 339
+ + D E RP+A L+ H +
Sbjct: 257 LLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
Query: 162 YMDGGSLADILRMQKS---IPEPI----LSSMFKKLLQGLSYLHGVRHLVHRDIKPANLL 214
+ + SL+D+ + S EPI L S ++ +G+ +L R +HRD+ N+L
Sbjct: 173 FQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSS-RKCIHRDLAARNIL 231
Query: 215 VNLKGRPKITDFGISAGLENS---IAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLA 271
++ KI DFG++ + + + T + + +M+PE I ++ YS +D+WS G+
Sbjct: 232 LSENNVVKICDFGLARDIYKNPDYVRKGDTRL-PLKWMAPESIFDKIYSTKSDVWSYGVL 290
Query: 272 LFEC-GTGEFPYAASEGPVNLMLQILED---PSPSPSRQNFSPEFCSFVDDCLKKDAEAR 327
L+E G PY + + ++ E +P S +PE + DC +D + R
Sbjct: 291 LWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYS----TPEIYQIMLDCWHRDPKER 346
Query: 328 PTADQLL 334
P +L+
Sbjct: 347 PRFAELV 353
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 67 DESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLL 126
D+SD +T +R+ + G + V A + + R ALK++ E+EK ++
Sbjct: 14 DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII 73
Query: 127 TEIRTLCEAPCNEGLVEFHGAFYM----PDSGQIS-IALEYMDGGSLADILRMQKS---I 178
E+ + + + +V+F A + D+GQ + L + G L + L+ +S +
Sbjct: 74 QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPL 133
Query: 179 PEPILSSMFKKLLQGLSYLHGVR-HLVHRDIKPANLLVNLKGRPKITDFG---------- 227
+ +F + + + ++H + ++HRD+K NLL++ +G K+ DFG
Sbjct: 134 SCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD 193
Query: 228 --ISAGLENSIAMCATFVGTVTYMSPERI---RNESYSYPADIWSIGLALF 273
SA + T T Y +PE I N DIW++G L+
Sbjct: 194 YSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 93/241 (38%), Gaps = 47/241 (19%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKI-NIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGA 147
IG+G+ V A R++A+KKI +FE L+ R L E L H
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-----DLIDCKRILREIAILNRLNHDHVV 115
Query: 148 ----FYMPDS----GQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHG 199
+P ++ + LE D + R + E + ++ LL G+ Y+H
Sbjct: 116 KVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS 174
Query: 200 VRHLVHRDIKPANLLVNLKGRPKITDFGISAGLE-------------------------- 233
++HRD+KPAN LVN K+ DFG++ ++
Sbjct: 175 A-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 234 -NSIAMCATFVGTVTYMSPERI-RNESYSYPADIWSIGL---ALFECGTGEFPYAASEGP 288
N V T Y +PE I E+Y+ D+WSIG L Y A GP
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGP 293
Query: 289 V 289
+
Sbjct: 294 L 294
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 158 IALEYMDGGSLADILR--MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLV 215
I E+M G+L D LR ++ + +L M ++ + YL ++ +HR++ N LV
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNFIHRNLAARNCLV 351
Query: 216 NLKGRPKITDFGIS---AGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLAL 272
K+ DFG+S G + A F + + +PE + +S +D+W+ G+ L
Sbjct: 352 GENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLL 409
Query: 273 FECGT-GEFPY 282
+E T G PY
Sbjct: 410 WEIATYGMSPY 420
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 164 DGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKI 223
D GS D ++ ++ P + ++ G+ YL H+VH+D+ N+LV K KI
Sbjct: 128 DVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKI 186
Query: 224 TDFGI--SAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEF 280
+D G+ + + + + +M+PE I +S +DIWS G+ L+E + G
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 246
Query: 281 PYAA-SEGPVNLML---QILEDPSPSPS 304
PY S V M+ Q+L P P+
Sbjct: 247 PYCGYSNQDVVEMIRNRQVLPCPDDCPA 274
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 164 DGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGRPKI 223
D GS D ++ ++ P + ++ G+ YL H+VH+D+ N+LV K KI
Sbjct: 111 DVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKI 169
Query: 224 TDFGI--SAGLENSIAMCATFVGTVTYMSPERIRNESYSYPADIWSIGLALFECGT-GEF 280
+D G+ + + + + +M+PE I +S +DIWS G+ L+E + G
Sbjct: 170 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 229
Query: 281 PYAA-SEGPVNLML---QILEDPSPSPS 304
PY S V M+ Q+L P P+
Sbjct: 230 PYCGYSNQDVVEMIRNRQVLPCPDDCPA 257
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 46/235 (19%)
Query: 138 NEGLVEFHGAFYMPDSGQISIAL--EYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLS 195
+E L++F A + ++ + L + D GSL D L+ I L + + + +GLS
Sbjct: 68 HENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK-GNIITWNELCHVAETMSRGLS 126
Query: 196 YLH-------GVRH---LVHRDIKPANLLVNLKGRPKITDFGISAGLENSIAMCATF--V 243
YLH G H + HRD K N+L+ + DFG++ E T V
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 244 GTVTYMSPERIRNE-SYSYPA----DIWSIGLALFECGTGEFPYAASEGPVN-LMLQILE 297
GT YM+PE + ++ A D++++GL L+E + A++GPV+ ML E
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS---RCKAADGPVDEYMLPFEE 243
Query: 298 DPSPSPSRQNFS----------------------PEFCSFVDDCLKKDAEARPTA 330
+ PS + + C +++C DAEAR +A
Sbjct: 244 EIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSA 298
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 32/241 (13%)
Query: 109 IALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMP--DSGQIS-IALEYMDG 165
+A+K +N + L I L EA +G H + GQ + + +E M
Sbjct: 50 VAVKTVN-----ESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 166 GSLADILRMQK-------SIPEPILSSMFK---KLLQGLSYLHGVRHLVHRDIKPANLLV 215
G L LR + P P L M + ++ G++YL+ + VHR++ N +V
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRNLAARNCMV 163
Query: 216 NLKGRPKITDFGISAGLENSIAMCATFVGT--VTYMSPERIRNESYSYPADIWSIGLALF 273
KI DFG++ + + G V +M+PE +++ ++ +D+WS G+ L+
Sbjct: 164 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 274 ECGT-GEFPYA--ASEGPVNLMLQ--ILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARP 328
E + E PY ++E + ++ L+ P P R + C + + RP
Sbjct: 224 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER------VTDLMRMCWQFNPNMRP 277
Query: 329 T 329
T
Sbjct: 278 T 278
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 129/338 (38%), Gaps = 90/338 (26%)
Query: 89 IGSGASSVVQRAVHIPTHRIIALKKIN-IFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHG 146
IG G+ V A ++ +A+KK+N +FE ++L EI T+ ++ ++ H
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREI-TILNRLKSDYIIRLHD 94
Query: 147 AFYMPD---SGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHL 203
D ++ I LE D L + + + E + ++ LL G ++H +
Sbjct: 95 LIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHE-SGI 152
Query: 204 VHRDIKPANLLVNLKGRPKITDFGISAGL-------------------------ENSIAM 238
+HRD+KPAN L+N KI DFG++ + +N
Sbjct: 153 IHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQ 212
Query: 239 CATFVGTVTYMSPERI-RNESYSYPADIWSIGLALFEC-------------------GTG 278
+ V T Y +PE I E+Y+ DIWS G E G+
Sbjct: 213 LTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSS 272
Query: 279 EFPYA-----------ASEGPVNLMLQILEDPSPS-----------------PSRQ---- 306
FP + ++ +N++ ++ P P+R
Sbjct: 273 CFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDL 332
Query: 307 -----NFSPEFCSFVDDCLKKDAEARPTADQLLSHPFI 339
+ S E ++ L+ +A+ R T D+ LSHP++
Sbjct: 333 SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,101,827
Number of Sequences: 62578
Number of extensions: 457216
Number of successful extensions: 3907
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 999
Number of HSP's gapped (non-prelim): 1222
length of query: 371
length of database: 14,973,337
effective HSP length: 100
effective length of query: 271
effective length of database: 8,715,537
effective search space: 2361910527
effective search space used: 2361910527
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)