BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017449
MSSLYDCHQEGEVQYQQFPSKSSQNRLLCIKGRDNHDGSWNYYALAWPKALPYNATLMKG
LTFVSYNHYSYENIWHGLSAMVPFVAWHQKNNCELPTRWILYHWGELRLGMGPWLQTLMH
ATFDGEPVIERFDGINDEDGGDPVCFEKAVVMRHNEGGMSRERRMEVYDLMRCKARMYCN
VSLDNKDDNHKAVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCE
QVKLMSMTDILVSPHGAQLTNIFLMDRNSSVMEFFPKGWLKLAGVGQYVFHWIASWSGMR
HQGAWRDPNGENCTYSEDDRRCMSIYKNGRIGYNETYFSEWARNVLNEVKTMKLEKSQSN
GSASSSNGCMC

High Scoring Gene Products

Symbol, full name Information P value
AT4G33600 protein from Arabidopsis thaliana 5.8e-137
AT4G33590 protein from Arabidopsis thaliana 2.6e-134

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017449
        (371 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2134248 - symbol:AT4G33600 "AT4G33600" species...  1341  5.8e-137  1
TAIR|locus:2134233 - symbol:AT4G33590 species:3702 "Arabi...  1316  2.6e-134  1


>TAIR|locus:2134248 [details] [associations]
            symbol:AT4G33600 "AT4G33600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR007657 Pfam:PF04577
            EMBL:CP002687 GO:GO:0016757 HOGENOM:HOG000243185
            ProtClustDB:CLSN2685673 EMBL:AK118140 IPI:IPI00536315
            RefSeq:NP_195086.4 UniGene:At.31569 UniGene:At.74239 PRIDE:Q8GXN3
            EnsemblPlants:AT4G33600.1 GeneID:829500 KEGG:ath:AT4G33600
            TAIR:At4g33600 OMA:SFKNESA PhylomeDB:Q8GXN3 Genevestigator:Q8GXN3
            Uniprot:Q8GXN3
        Length = 470

 Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
 Identities = 241/355 (67%), Positives = 283/355 (79%)

Query:     1 MSSLYDCHQEGEVQYQQFPSKSSQNRLLCIKGRDNHDGSWNYYALAWPKALPYNATLMKG 60
             MSSLYD   +GEVQYQ+FPS+SS+ RLLC+KG D HDGSWNYYALAWP+ALP NA+L +G
Sbjct:   105 MSSLYDNQTKGEVQYQEFPSESSKGRLLCLKGVDEHDGSWNYYALAWPQALPVNASLQEG 164

Query:    61 LTFVSYNHYSYENIWHGLSAMVPFVAWHQKNNCELPTRWILYHWGELRLGMGPWLQTLMH 120
             LTFVSYNHY Y N+WHGLSAMVPFVAW  ++ CE P RW+LYHWGELR  MG WL  ++ 
Sbjct:   165 LTFVSYNHYDYGNMWHGLSAMVPFVAWSLRHQCENPQRWVLYHWGELRFKMGNWLNEIIT 224

Query:   121 ATFDGEPVIERFDGINDEDGGDPVCFEKAVVMRHNEGGMSRERRMEVYDLMRCKARMYCN 180
             AT+       RF      D   PVCFEKAVVMRHNEGGMSRERRMEV+DL+RCKAR YCN
Sbjct:   225 ATYGQNTEFLRF-----RDKNRPVCFEKAVVMRHNEGGMSRERRMEVFDLIRCKARHYCN 279

Query:   181 VSLDNKDDNHKAVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCE 240
             +SL   + +   +GMTLLMRTGPRSF NE A+I IF++EC  ++GC + V+YSNNLTFCE
Sbjct:   280 ISLS--ETSKSRIGMTLLMRTGPRSFKNESAVIDIFKRECKNVEGCELKVSYSNNLTFCE 337

Query:   241 QVKLMSMTDILVSPHGAQLTNIFLMDRNSSVMEFFPKGWLKLAGVGQYVFHWIASWSGMR 300
             QV+LM MTD+LVSPHGAQLTN+ LMDRNSSVMEF PKGW KLAGVGQ V+ W   WSGMR
Sbjct:   338 QVELMRMTDVLVSPHGAQLTNLVLMDRNSSVMEFLPKGWRKLAGVGQLVYQWGTRWSGMR 397

Query:   301 HQGAWRDPNGENCTYSEDDRRCMS-IYKNGRIGYNETYFSEWARNVLNEVKTMKL 354
             H+G+W DP+GE C + + DRRCMS +YKNGRIGYNETYF EWA++VL + K  K+
Sbjct:   398 HEGSWHDPDGEICQFPDTDRRCMSSVYKNGRIGYNETYFGEWAKSVLGKFKERKM 452


>TAIR|locus:2134233 [details] [associations]
            symbol:AT4G33590 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR007657
            Pfam:PF04577 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016757
            EMBL:AL161583 EMBL:AL031394 IPI:IPI00517050 PIR:T04976
            RefSeq:NP_195085.1 UniGene:At.50901 PRIDE:O81876
            EnsemblPlants:AT4G33590.1 GeneID:829499 KEGG:ath:AT4G33590
            TAIR:At4g33590 eggNOG:NOG275922 HOGENOM:HOG000243185
            InParanoid:O81876 OMA:YCNISSS PhylomeDB:O81876
            ProtClustDB:CLSN2685673 Genevestigator:O81876 Uniprot:O81876
        Length = 466

 Score = 1316 (468.3 bits), Expect = 2.6e-134, P = 2.6e-134
 Identities = 236/355 (66%), Positives = 282/355 (79%)

Query:     1 MSSLYDCHQEGEVQYQQFPSKSSQNRLLCIKGRDNHDGSWNYYALAWPKALPYNATLMKG 60
             MSSLYD   +GE QYQ+FPS SS+ RLLC+KG D HDGSWN YALAWP+ALP NA L  G
Sbjct:   102 MSSLYDNQTKGEAQYQEFPSDSSKGRLLCLKGVDEHDGSWNSYALAWPEALPTNAILQDG 161

Query:    61 LTFVSYNHYSYENIWHGLSAMVPFVAWHQKNNCELPTRWILYHWGELRLGMGPWLQTLMH 120
             LTFVSYN Y Y N+WHGL+A+VPF+AW  +N CE P +W+LYHWGELR GMG WL  ++ 
Sbjct:   162 LTFVSYNQYDYGNLWHGLTAVVPFIAWSLRNQCEKPQKWVLYHWGELRFGMGHWLSEIVT 221

Query:   121 ATFDGEPVIERFDGINDEDGGDPVCFEKAVVMRHNEGGMSRERRMEVYDLMRCKARMYCN 180
             AT+  EP   RF  ++D+    PVCFEKAVVMRHNEGGMSRERRME +DL+RCKAR YCN
Sbjct:   222 ATYGQEPDFLRF--VDDDK---PVCFEKAVVMRHNEGGMSRERRMEAFDLIRCKARNYCN 276

Query:   181 VSLDNKDDNHKAVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCE 240
             +S  +   +   +GMTLL+RTG RSF NE  +I +F+KEC ++DGC ++V+YSNNL+FCE
Sbjct:   277 IS--SSVASKPRIGMTLLLRTGARSFRNESMVIDVFKKECKRVDGCEISVSYSNNLSFCE 334

Query:   241 QVKLMSMTDILVSPHGAQLTNIFLMDRNSSVMEFFPKGWLKLAGVGQYVFHWIASWSGMR 300
             QV+LM  TD+LVSPHGAQLTN+FLMD+NSSVMEFFPKGWLKLAGVGQ VF W A+WSGMR
Sbjct:   335 QVELMKKTDVLVSPHGAQLTNLFLMDKNSSVMEFFPKGWLKLAGVGQLVFQWGANWSGMR 394

Query:   301 HQGAWRDPNGENCTYSEDDRRCMSIYKNGRIGYNETYFSEWARNVLNE--VKTMK 353
             H+G+W DP GE C + + DRRCMSIYKN  IGYNETYF EWAR VL +  ++ MK
Sbjct:   395 HEGSWHDPVGEICQFPDTDRRCMSIYKNAMIGYNETYFGEWARRVLGKFSIREMK 449


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.451    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      371       359   0.00081  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  631 (67 KB)
  Total size of DFA:  310 KB (2157 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.07u 0.06s 26.13t   Elapsed:  00:00:02
  Total cpu time:  26.07u 0.06s 26.13t   Elapsed:  00:00:02
  Start:  Sat May 11 12:41:42 2013   End:  Sat May 11 12:41:44 2013

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