Query 017449
Match_columns 371
No_of_seqs 250 out of 585
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 14:36:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017449.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017449hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2amj_A Modulator of drug activ 58.7 20 0.0007 31.4 6.7 57 194-252 14-75 (204)
2 2q62_A ARSH; alpha/beta, flavo 58.0 22 0.00075 32.5 7.0 60 192-253 34-104 (247)
3 4a5o_A Bifunctional protein fo 56.1 20 0.00069 33.9 6.4 81 176-275 152-233 (286)
4 3tnl_A Shikimate dehydrogenase 55.9 64 0.0022 30.6 10.1 76 194-276 180-264 (315)
5 4b4u_A Bifunctional protein fo 55.4 71 0.0024 30.4 10.1 79 176-275 170-251 (303)
6 3ngx_A Bifunctional protein fo 53.6 22 0.00074 33.5 6.2 70 194-275 152-222 (276)
7 3fni_A Putative diflavin flavo 50.3 29 0.001 29.1 6.0 138 192-357 6-155 (159)
8 3t4e_A Quinate/shikimate dehyd 47.7 72 0.0025 30.1 9.0 76 194-276 174-258 (312)
9 3czx_A Putative N-acetylmuramo 47.2 15 0.00051 32.0 3.7 37 225-261 46-84 (182)
10 3p2o_A Bifunctional protein fo 47.1 29 0.00099 32.8 5.9 70 194-275 162-232 (285)
11 3l07_A Bifunctional protein fo 46.5 29 0.001 32.7 5.9 70 194-275 163-233 (285)
12 3fvw_A Putative NAD(P)H-depend 46.3 42 0.0014 28.9 6.6 57 194-253 4-73 (192)
13 2fzv_A Putative arsenical resi 45.6 38 0.0013 31.7 6.5 59 193-253 59-129 (279)
14 4a26_A Putative C-1-tetrahydro 44.0 31 0.0011 32.8 5.6 72 194-275 167-239 (300)
15 1a4i_A Methylenetetrahydrofola 42.6 40 0.0014 32.1 6.2 71 194-276 167-238 (301)
16 1rtt_A Conserved hypothetical 39.8 59 0.002 27.5 6.5 56 194-252 8-77 (193)
17 3lcm_A SMU.1420, putative oxid 37.7 69 0.0024 27.6 6.6 56 194-252 2-78 (196)
18 1b0a_A Protein (fold bifunctio 37.6 47 0.0016 31.4 5.8 70 194-275 161-231 (288)
19 1jwq_A N-acetylmuramoyl-L-alan 36.6 46 0.0016 28.8 5.2 47 215-261 36-86 (179)
20 3jyo_A Quinate/shikimate dehyd 35.9 51 0.0017 30.6 5.7 71 194-276 153-230 (283)
21 4hs4_A Chromate reductase; tri 34.4 64 0.0022 28.1 5.9 58 193-253 7-79 (199)
22 3hly_A Flavodoxin-like domain; 34.3 59 0.002 27.1 5.4 54 193-252 3-56 (161)
23 2vzf_A NADH-dependent FMN redu 32.8 66 0.0023 27.5 5.6 67 194-262 4-87 (197)
24 2c2x_A Methylenetetrahydrofola 29.5 74 0.0025 29.9 5.7 70 194-275 160-232 (281)
25 3l4e_A Uncharacterized peptida 27.8 86 0.003 27.6 5.6 68 193-265 28-97 (206)
26 1t0i_A YLR011WP; FMN binding p 25.5 84 0.0029 26.4 5.0 58 194-252 2-89 (191)
27 3svl_A Protein YIEF; E. coli C 25.4 84 0.0029 27.1 5.0 58 193-253 5-78 (193)
28 3ne8_A N-acetylmuramoyl-L-alan 24.4 87 0.003 28.3 5.0 27 235-261 60-88 (234)
29 3rpe_A MDAB, modulator of drug 23.7 1E+02 0.0035 27.6 5.3 29 224-252 59-88 (218)
30 3u7r_A NADPH-dependent FMN red 23.6 1.2E+02 0.004 26.4 5.6 67 194-263 4-90 (190)
31 2ohh_A Type A flavoprotein FPR 23.3 1.7E+02 0.0057 27.5 7.1 44 208-252 269-312 (404)
32 3tem_A Ribosyldihydronicotinam 22.9 1.6E+02 0.0056 26.0 6.5 41 194-236 3-43 (228)
33 1t5b_A Acyl carrier protein ph 22.3 2E+02 0.0067 23.9 6.7 42 194-236 3-46 (201)
34 1d4a_A DT-diaphorase, quinone 21.8 1.5E+02 0.0052 26.9 6.2 41 194-236 4-44 (273)
35 3qay_A Endolysin; amidase A/B 20.7 1.5E+02 0.0052 25.4 5.6 23 237-259 65-89 (180)
36 2bsj_A Chaperone protein SYCT; 20.4 80 0.0027 25.8 3.4 28 331-358 93-120 (133)
37 2hpv_A FMN-dependent NADH-azor 20.3 1.9E+02 0.0064 24.5 6.2 11 224-234 35-45 (208)
38 1fme_A FSD-EY peptide; beta-BE 20.1 65 0.0022 19.2 2.1 17 202-218 8-24 (28)
No 1
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=58.69 E-value=20 Score=31.40 Aligned_cols=57 Identities=5% Similarity=0.144 Sum_probs=35.7
Q ss_pred EEEEEEcCCCC----cccCHHHHHHHHHhhccccCCceEEEEEcC-CCCHHHHHHHhccCcEEE
Q 017449 194 GMTLLMRTGPR----SFTNEPAIIGIFEKECAKIDGCRMTVAYSN-NLTFCEQVKLMSMTDILV 252 (371)
Q Consensus 194 rv~~i~R~~~R----~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~-~~s~~eQv~l~~~advli 252 (371)
+|++|.= .+| +=.|-..+++++.+.+.. .|.+++++++. +..+.+.++.+..||+||
T Consensus 14 ~iLii~g-sP~~~~s~~s~~~~l~~~~~~~~~~-~g~~v~~~dL~~~~d~~~~~~~l~~AD~iV 75 (204)
T 2amj_A 14 NILIING-AKKFAHSNGQLNDTLTEVADGTLRD-LGHDVRIVRADSDYDVKAEVQNFLWADVVI 75 (204)
T ss_dssp EEEEEEC-CC------CHHHHHHHHHHHHHHHH-TTCEEEEEESSSCCCHHHHHHHHHHCSEEE
T ss_pred CEEEEEc-CCCcccCcCcHHHHHHHHHHHHHHH-cCCEEEEEeCCccccHHHHHHHHHhCCEEE
Confidence 4677762 233 223444555555443322 37889999984 457888889999999876
No 2
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=57.99 E-value=22 Score=32.49 Aligned_cols=60 Identities=13% Similarity=0.045 Sum_probs=39.3
Q ss_pred eeEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCC-----------HHHHHHHhccCcEEEe
Q 017449 192 AVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLT-----------FCEQVKLMSMTDILVS 253 (371)
Q Consensus 192 ~~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s-----------~~eQv~l~~~advlig 253 (371)
..+|++|.= ..|.=.|-..+++.+.+.+. ..|.+++++++.+++ +.+-++.+.+||.||=
T Consensus 34 ~mkIliI~G-S~r~~s~t~~La~~~~~~l~-~~g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~ 104 (247)
T 2q62_A 34 RPRILILYG-SLRTVSYSRLLAEEARRLLE-FFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSEGQVW 104 (247)
T ss_dssp CCEEEEEEC-CCCSSCHHHHHHHHHHHHHH-HTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCSEEEE
T ss_pred CCeEEEEEc-cCCCCCHHHHHHHHHHHHHh-hCCCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCCEEEE
Confidence 356788773 23433444555554444332 257899999987776 6777889999998873
No 3
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=56.12 E-value=20 Score=33.89 Aligned_cols=81 Identities=14% Similarity=0.141 Sum_probs=54.6
Q ss_pred HHHcCCCCCCCCCCCCeeEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeec
Q 017449 176 RMYCNVSLDNKDDNHKAVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPH 255 (371)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~H 255 (371)
++.++++.. ++ ++++|.|.+ ++- .-+...|.. .|+.+.+....+..+.+ .+.+|||+|+.-
T Consensus 152 L~~~~i~l~----Gk---~vvVvGrs~---iVG-~plA~lL~~-----~gAtVtv~hs~T~~L~~---~~~~ADIVI~Av 212 (286)
T 4a5o_A 152 LASTGADLY----GM---DAVVVGASN---IVG-RPMALELLL-----GGCTVTVTHRFTRDLAD---HVSRADLVVVAA 212 (286)
T ss_dssp HHHTTCCCT----TC---EEEEECTTS---TTH-HHHHHHHHH-----TTCEEEEECTTCSCHHH---HHHTCSEEEECC
T ss_pred HHHhCCCCC----CC---EEEEECCCc---hhH-HHHHHHHHH-----CCCeEEEEeCCCcCHHH---HhccCCEEEECC
Confidence 445666552 22 588999875 221 223344444 46788887665666665 467999999998
Q ss_pred hhh-hhhhhccCCCcEEEEEe
Q 017449 256 GAQ-LTNIFLMDRNSSVMEFF 275 (371)
Q Consensus 256 GAg-LtN~lFm~pgs~viEi~ 275 (371)
|+. +...=|.+||++||.+-
T Consensus 213 g~p~~I~~~~vk~GavVIDvg 233 (286)
T 4a5o_A 213 GKPGLVKGEWIKEGAIVIDVG 233 (286)
T ss_dssp CCTTCBCGGGSCTTCEEEECC
T ss_pred CCCCCCCHHHcCCCeEEEEec
Confidence 875 65666779999999985
No 4
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=55.86 E-value=64 Score=30.56 Aligned_cols=76 Identities=9% Similarity=0.160 Sum_probs=48.0
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhhhhh---------hhc
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQLTN---------IFL 264 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAgLtN---------~lF 264 (371)
+|++++|+..+ ....+++.+.+... .++.+.++.+++. .+--+.+.++||||..-.+|+.. .-+
T Consensus 180 ~V~i~nR~~~~-~~~a~~la~~~~~~----~~~~~~~~~~~~~--~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~ 252 (315)
T 3tnl_A 180 EISIFNRKDDF-YANAEKTVEKINSK----TDCKAQLFDIEDH--EQLRKEIAESVIFTNATGVGMKPFEGETLLPSADM 252 (315)
T ss_dssp EEEEEECSSTT-HHHHHHHHHHHHHH----SSCEEEEEETTCH--HHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGG
T ss_pred EEEEEECCCch-HHHHHHHHHHhhhh----cCCceEEeccchH--HHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHH
Confidence 57788876422 33345555555543 3566777776653 11124677999999888888752 124
Q ss_pred cCCCcEEEEEee
Q 017449 265 MDRNSSVMEFFP 276 (371)
Q Consensus 265 m~pgs~viEi~P 276 (371)
++++.+|++++-
T Consensus 253 l~~~~~V~DlvY 264 (315)
T 3tnl_A 253 LRPELIVSDVVY 264 (315)
T ss_dssp CCTTCEEEESCC
T ss_pred cCCCCEEEEecc
Confidence 678889999873
No 5
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=55.36 E-value=71 Score=30.39 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=54.7
Q ss_pred HHHcCCCCCCCCCCCCeeEEEEEEcCC--CCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEe
Q 017449 176 RMYCNVSLDNKDDNHKAVGMTLLMRTG--PRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVS 253 (371)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~rv~~i~R~~--~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig 253 (371)
+.+++++.. ++ ++++|.|.+ .|-+ ...|.+ .++.|.+....+-.+.+ ...+|||+|+
T Consensus 170 L~~~~i~l~----Gk---~vvViGRS~iVGkPl------a~LL~~-----~~ATVTi~Hs~T~dl~~---~~~~ADIvV~ 228 (303)
T 4b4u_A 170 LKENNIEIA----GK---HAVVVGRSAILGKPM------AMMLLQ-----ANATVTICHSRTQNLPE---LVKQADIIVG 228 (303)
T ss_dssp HHHTTCCCT----TC---EEEEECCCTTTHHHH------HHHHHH-----TTCEEEEECTTCSSHHH---HHHTCSEEEE
T ss_pred HHHHCCCCC----CC---EEEEEeccccccchH------HHHHHh-----cCCEEEEecCCCCCHHH---HhhcCCeEEe
Confidence 456777653 32 589999875 2432 233333 46788888777777776 5568999998
Q ss_pred ech-hhhhhhhccCCCcEEEEEe
Q 017449 254 PHG-AQLTNIFLMDRNSSVMEFF 275 (371)
Q Consensus 254 ~HG-AgLtN~lFm~pgs~viEi~ 275 (371)
.=| +++...=|.+||++||.+-
T Consensus 229 A~G~p~~i~~d~vk~GavVIDVG 251 (303)
T 4b4u_A 229 AVGKAELIQKDWIKQGAVVVDAG 251 (303)
T ss_dssp CSCSTTCBCGGGSCTTCEEEECC
T ss_pred ccCCCCccccccccCCCEEEEec
Confidence 866 4555566889999999963
No 6
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=53.65 E-value=22 Score=33.51 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=49.4
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhh-hhhhhccCCCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ-LTNIFLMDRNSSVM 272 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg-LtN~lFm~pgs~vi 272 (371)
++++|.|++. +- .-+...|.. .|+.+.+....+.++.+ .+.+|||+|+.=|+. +...=|.+||++||
T Consensus 152 ~vvVvG~s~i---VG-~plA~lL~~-----~gAtVtv~~~~t~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVI 219 (276)
T 3ngx_A 152 TVTIVNRSPV---VG-RPLSMMLLN-----RNYTVSVCHSKTKDIGS---MTRSSKIVVVAVGRPGFLNREMVTPGSVVI 219 (276)
T ss_dssp EEEEECCCTT---TH-HHHHHHHHH-----TTCEEEEECTTCSCHHH---HHHHSSEEEECSSCTTCBCGGGCCTTCEEE
T ss_pred EEEEEcCChH---HH-HHHHHHHHH-----CCCeEEEEeCCcccHHH---hhccCCEEEECCCCCccccHhhccCCcEEE
Confidence 5889988751 11 223344444 46788887766667765 467999999998874 55566779999999
Q ss_pred EEe
Q 017449 273 EFF 275 (371)
Q Consensus 273 Ei~ 275 (371)
-+-
T Consensus 220 Dvg 222 (276)
T 3ngx_A 220 DVG 222 (276)
T ss_dssp ECC
T ss_pred Eec
Confidence 985
No 7
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=50.29 E-value=29 Score=29.07 Aligned_cols=138 Identities=16% Similarity=0.074 Sum_probs=71.6
Q ss_pred eeEEEEEEcCC-CCcccCHHHHHHHHHhhccccCCceEEEEEcCCC-CHHHHHHHhccCcEEE---eechhhhhhhhcc-
Q 017449 192 AVGMTLLMRTG-PRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNL-TFCEQVKLMSMTDILV---SPHGAQLTNIFLM- 265 (371)
Q Consensus 192 ~~rv~~i~R~~-~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~-s~~eQv~l~~~advli---g~HGAgLtN~lFm- 265 (371)
++-|+|.|..| .+++. +.+.+.|++ .|++++++++... +..+-+..+.++|.+| ..+|..+...-|+
T Consensus 6 kv~IvY~S~~GnT~~iA--~~ia~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p~~~~l~ 78 (159)
T 3fni_A 6 SIGVFYVSEYGYSDRLA--QAIINGITK-----TGVGVDVVDLGAAVDLQELRELVGRCTGLVIGMSPAASAASIQGALS 78 (159)
T ss_dssp EEEEEECTTSTTHHHHH--HHHHHHHHH-----TTCEEEEEESSSCCCHHHHHHHHHTEEEEEEECCBTTSHHHHHHHHH
T ss_pred EEEEEEECCChHHHHHH--HHHHHHHHH-----CCCeEEEEECcCcCCHHHHHHHHHhCCEEEEEcCcCCCCccHHHHHH
Confidence 45567777654 24443 334444444 5778889998887 8888777788888665 3455444311121
Q ss_pred ------CCCcEEEEEeeCccccccccchhhHHHHHhhcCCcccccccCCCCCCCCCCCCccccccccccceeecccchHH
Q 017449 266 ------DRNSSVMEFFPKGWLKLAGVGQYVFHWIASWSGMRHQGAWRDPNGENCTYSEDDRRCMSIYKNGRIGYNETYFS 339 (371)
Q Consensus 266 ------~pgs~viEi~P~~~~~~a~~~~~~Y~~lA~~~Gl~h~~~w~d~~~~~c~~~~~~~~c~~~~k~~~v~in~~~f~ 339 (371)
.+|-.+.=+-.++|..-+ ..... ......|+.-.+. + -.+...++ .=+.....
T Consensus 79 ~l~~~~~~~k~va~fgs~g~~~~a--~~~l~-~~l~~~G~~~v~~---~--~~~~~~P~-------------~~dl~~~~ 137 (159)
T 3fni_A 79 TILGSVNEKQAVGIFETGGGDDEP--IDPLL-SKFRNLGLTTAFP---A--IRIKQTPT-------------ENTYKLCE 137 (159)
T ss_dssp HHHHHCCTTSEEEEECCSSSCBCC--HHHHH-HHHHHTTCEESSS---C--BCCSSCCC-------------HHHHHHHH
T ss_pred HHHhhcccCCEEEEEEcCCCCcHH--HHHHH-HHHHHCCCEEecC---c--eEEEeCCC-------------HHHHHHHH
Confidence 234333333345554211 11122 2223345432110 0 00111111 11234558
Q ss_pred HHHHHHHHHHHHhhhhcc
Q 017449 340 EWARNVLNEVKTMKLEKS 357 (371)
Q Consensus 340 ~~l~~vl~~~~~~~~~~~ 357 (371)
++.+++.++++.+++|+-
T Consensus 138 ~~g~~la~~~~~~~~~~~ 155 (159)
T 3fni_A 138 EAGTDLGQWVTRDRLEHH 155 (159)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhHHhhc
Confidence 899999999999998853
No 8
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=47.72 E-value=72 Score=30.13 Aligned_cols=76 Identities=18% Similarity=0.219 Sum_probs=47.2
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhhhh---h------hhc
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQLT---N------IFL 264 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAgLt---N------~lF 264 (371)
+|++++|+..| ....+++.+.+... .++.+.++.++++. +-.+.+.++|+||..-.+||. . .-+
T Consensus 174 ~v~v~nRt~~~-~~~a~~la~~~~~~----~~~~v~~~~~~~l~--~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~ 246 (312)
T 3t4e_A 174 EIKLFNRKDDF-FEKAVAFAKRVNEN----TDCVVTVTDLADQH--AFTEALASADILTNGTKVGMKPLENESLIGDVSL 246 (312)
T ss_dssp EEEEEECSSTH-HHHHHHHHHHHHHH----SSCEEEEEETTCHH--HHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGG
T ss_pred EEEEEECCCch-HHHHHHHHHHhhhc----cCcceEEechHhhh--hhHhhccCceEEEECCcCCCCCCCCCcccCCHHH
Confidence 57788877433 33345555555543 34566666665431 113457789999998888872 1 124
Q ss_pred cCCCcEEEEEee
Q 017449 265 MDRNSSVMEFFP 276 (371)
Q Consensus 265 m~pgs~viEi~P 276 (371)
++++.+|++++-
T Consensus 247 l~~~~~v~D~vY 258 (312)
T 3t4e_A 247 LRPELLVTECVY 258 (312)
T ss_dssp SCTTCEEEECCC
T ss_pred cCCCCEEEEecc
Confidence 577888999873
No 9
>3czx_A Putative N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI, MCSG, protein structure initiative; 1.60A {Neisseria meningitidis MC58}
Probab=47.16 E-value=15 Score=32.05 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=28.0
Q ss_pred CceEEEEEc--CCCCHHHHHHHhccCcEEEeechhhhhh
Q 017449 225 GCRMTVAYS--NNLTFCEQVKLMSMTDILVSPHGAQLTN 261 (371)
Q Consensus 225 g~~~~vv~~--~~~s~~eQv~l~~~advlig~HGAgLtN 261 (371)
|++|....- ...++.+-+++.++||++|+.|-.+..|
T Consensus 46 G~~V~~tR~~d~~~~L~~R~~~an~adlfISIH~Na~~~ 84 (182)
T 3czx_A 46 GLTVKTDGTGKGNMPLRDAVKLIRGSDVAIEFHTNAAAN 84 (182)
T ss_dssp CCCEEESCSSCCCCCHHHHHHHHHTCSEEEEECCBCCSS
T ss_pred CcEEEEecCCCccCCHHHHHHHhhCCCEEEEeccCCCCC
Confidence 555554443 3468999999999999999999776654
No 10
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=47.08 E-value=29 Score=32.78 Aligned_cols=70 Identities=9% Similarity=0.143 Sum_probs=48.7
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhh-hhhhhccCCCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ-LTNIFLMDRNSSVM 272 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg-LtN~lFm~pgs~vi 272 (371)
++++|.|.+. +- .-+...|.. .|+.+.+....+..+.+ .+.+|||+|+.=|+. +...=|.+||++||
T Consensus 162 ~vvVvGrs~i---VG-~p~A~lL~~-----~gAtVtv~h~~t~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVI 229 (285)
T 3p2o_A 162 DAVIIGASNI---VG-RPMATMLLN-----AGATVSVCHIKTKDLSL---YTRQADLIIVAAGCVNLLRSDMVKEGVIVV 229 (285)
T ss_dssp EEEEECCCTT---TH-HHHHHHHHH-----TTCEEEEECTTCSCHHH---HHTTCSEEEECSSCTTCBCGGGSCTTEEEE
T ss_pred EEEEECCCch---HH-HHHHHHHHH-----CCCeEEEEeCCchhHHH---HhhcCCEEEECCCCCCcCCHHHcCCCeEEE
Confidence 5889998752 21 223344444 46788887655556654 577999999998875 55556779999999
Q ss_pred EEe
Q 017449 273 EFF 275 (371)
Q Consensus 273 Ei~ 275 (371)
.+-
T Consensus 230 DVg 232 (285)
T 3p2o_A 230 DVG 232 (285)
T ss_dssp ECC
T ss_pred Eec
Confidence 985
No 11
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=46.54 E-value=29 Score=32.74 Aligned_cols=70 Identities=9% Similarity=0.096 Sum_probs=47.9
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhh-hhhhhccCCCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ-LTNIFLMDRNSSVM 272 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg-LtN~lFm~pgs~vi 272 (371)
++++|.|.+ ++- .-+...|.. .|+.+.+....+..+.+ .+.+|||+|+.=|+. +...=|.+||++||
T Consensus 163 ~vvVIG~s~---iVG-~p~A~lL~~-----~gAtVtv~hs~t~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVI 230 (285)
T 3l07_A 163 YAVVVGASN---VVG-KPVSQLLLN-----AKATVTTCHRFTTDLKS---HTTKADILIVAVGKPNFITADMVKEGAVVI 230 (285)
T ss_dssp EEEEECCCT---TTH-HHHHHHHHH-----TTCEEEEECTTCSSHHH---HHTTCSEEEECCCCTTCBCGGGSCTTCEEE
T ss_pred EEEEECCCc---hhH-HHHHHHHHH-----CCCeEEEEeCCchhHHH---hcccCCEEEECCCCCCCCCHHHcCCCcEEE
Confidence 588998765 221 223344444 46788777655556654 577999999998875 55555679999999
Q ss_pred EEe
Q 017449 273 EFF 275 (371)
Q Consensus 273 Ei~ 275 (371)
.+-
T Consensus 231 Dvg 233 (285)
T 3l07_A 231 DVG 233 (285)
T ss_dssp ECC
T ss_pred Eec
Confidence 985
No 12
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=46.25 E-value=42 Score=28.90 Aligned_cols=57 Identities=5% Similarity=-0.003 Sum_probs=37.1
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCC-------------HHHHHHHhccCcEEEe
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLT-------------FCEQVKLMSMTDILVS 253 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s-------------~~eQv~l~~~advlig 253 (371)
+|++|. ...|.=.|-..+++.+.+.+. .|.+++++++.+++ +.+-++.+.+||.+|=
T Consensus 4 kilii~-gS~r~~s~t~~la~~~~~~~~--~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~ 73 (192)
T 3fvw_A 4 RILFIV-GSFSEGSFNRQLAKKAETIIG--DRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWI 73 (192)
T ss_dssp EEEEEE-SCCSTTCHHHHHHHHHHHHHT--TSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEE
T ss_pred EEEEEE-cCCCCCCHHHHHHHHHHHhcC--CCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEE
Confidence 466666 223443455666666666543 56788888887665 3556678889998873
No 13
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=45.64 E-value=38 Score=31.67 Aligned_cols=59 Identities=15% Similarity=0.048 Sum_probs=37.3
Q ss_pred eEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCC------------HHHHHHHhccCcEEEe
Q 017449 193 VGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLT------------FCEQVKLMSMTDILVS 253 (371)
Q Consensus 193 ~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s------------~~eQv~l~~~advlig 253 (371)
.+|++|.= ..|.=.|-..+++.+.+.+. ..|.+++++++.+++ +.+-++.+..||.||=
T Consensus 59 mKILiI~G-S~R~~S~T~~La~~~~~~l~-~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~ 129 (279)
T 2fzv_A 59 VRILLLYG-SLRARSFSRLAVEEAARLLQ-FFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVW 129 (279)
T ss_dssp CEEEEEES-CCSSSCHHHHHHHHHHHHHH-HTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEE
T ss_pred CEEEEEEe-CCCCCCHHHHHHHHHHHHHh-hCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEE
Confidence 56788772 23433444444444433221 157899999987776 6666788999998873
No 14
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=43.95 E-value=31 Score=32.82 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=47.4
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhh-hhhhhccCCCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ-LTNIFLMDRNSSVM 272 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg-LtN~lFm~pgs~vi 272 (371)
++++|.|.+ ++- .-+...|.. .|+.+.+..-.+.++. -.+.+.+|||+|+.=|.. +...=|.+||++||
T Consensus 167 ~vvVIG~s~---iVG-~p~A~lL~~-----~gAtVtv~~~~T~~l~-l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVI 236 (300)
T 4a26_A 167 RAVVLGRSN---IVG-APVAALLMK-----ENATVTIVHSGTSTED-MIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVV 236 (300)
T ss_dssp EEEEECCCT---TTH-HHHHHHHHH-----TTCEEEEECTTSCHHH-HHHHHHTCSEEEECSCCTTCBCGGGSCTTCEEE
T ss_pred EEEEECCCc---hHH-HHHHHHHHH-----CCCeEEEEeCCCCCch-hhhhhccCCEEEECCCCCCCCcHHhcCCCcEEE
Confidence 588998775 221 123344444 4677777664444443 014688999999988875 55566789999999
Q ss_pred EEe
Q 017449 273 EFF 275 (371)
Q Consensus 273 Ei~ 275 (371)
.+-
T Consensus 237 Dvg 239 (300)
T 4a26_A 237 DVG 239 (300)
T ss_dssp ECC
T ss_pred EEe
Confidence 985
No 15
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=42.61 E-value=40 Score=32.07 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=48.0
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhh-hhhhhccCCCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ-LTNIFLMDRNSSVM 272 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg-LtN~lFm~pgs~vi 272 (371)
++++|.|++ ++... +...|.. .|..+.+....+-.+.+ .+.+|||+|+.-|.. +..-=|.+||++||
T Consensus 167 ~vvVIG~s~---iVG~p-~A~lL~~-----~gAtVtv~hs~t~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVI 234 (301)
T 1a4i_A 167 HAVVVGRSK---IVGAP-MHDLLLW-----NNATVTTCHSKTAHLDE---EVNKGDILVVATGQPEMVKGEWIKPGAIVI 234 (301)
T ss_dssp EEEEECCCT---TTHHH-HHHHHHH-----TTCEEEEECTTCSSHHH---HHTTCSEEEECCCCTTCBCGGGSCTTCEEE
T ss_pred EEEEECCCc---hHHHH-HHHHHHh-----CCCeEEEEECCcccHHH---HhccCCEEEECCCCcccCCHHHcCCCcEEE
Confidence 689999864 22111 3333433 46788877655555554 667999999999975 55555678999999
Q ss_pred EEee
Q 017449 273 EFFP 276 (371)
Q Consensus 273 Ei~P 276 (371)
-+--
T Consensus 235 DVgi 238 (301)
T 1a4i_A 235 DCGI 238 (301)
T ss_dssp ECCC
T ss_pred EccC
Confidence 9863
No 16
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=39.81 E-value=59 Score=27.54 Aligned_cols=56 Identities=13% Similarity=0.032 Sum_probs=38.8
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCC--------------HHHHHHHhccCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLT--------------FCEQVKLMSMTDILV 252 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s--------------~~eQv~l~~~advli 252 (371)
+|++|.=. .|+=.|-..+++.+.+.+. .|.+++++++.+++ +.+-++.+.+||.||
T Consensus 8 kilii~gS-~r~~g~t~~la~~i~~~l~--~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii 77 (193)
T 1rtt_A 8 KVLGISGS-LRSGSYNSAALQEAIGLVP--PGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALL 77 (193)
T ss_dssp EEEEEESC-CSTTCHHHHHHHHHHTTCC--TTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEE
T ss_pred eEEEEECC-CCCCChHHHHHHHHHHhcc--CCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEE
Confidence 57777633 3433577888888887654 57889888876654 334567888999887
No 17
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=37.72 E-value=69 Score=27.58 Aligned_cols=56 Identities=9% Similarity=0.099 Sum_probs=33.8
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCC---------------------HHHHHHHhccCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLT---------------------FCEQVKLMSMTDILV 252 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s---------------------~~eQv~l~~~advli 252 (371)
+|++|.=. +|.=.|-..+.+.+.+.+ ..|.+++++++.++. +.+-++.+.+||+||
T Consensus 2 kiLiI~gs-pr~~s~t~~l~~~~~~~~--~~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV 78 (196)
T 3lcm_A 2 KILIVYTH-PNPTSFNAEILKQVQTNL--SKEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHLI 78 (196)
T ss_dssp EEEEEECC-SCTTSHHHHHHHHHHHHS--CTTSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHHCSEEE
T ss_pred EEEEEEeC-CCCCChHHHHHHHHHHHh--cCCCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHhCCEEE
Confidence 45666532 233234466666666554 367899999875432 345566778888775
No 18
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=37.57 E-value=47 Score=31.35 Aligned_cols=70 Identities=11% Similarity=0.128 Sum_probs=47.6
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhh-hhhhhccCCCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ-LTNIFLMDRNSSVM 272 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg-LtN~lFm~pgs~vi 272 (371)
++++|.|++ ++-. -+...|.. .|+.+.+....+-.+.+ .+.+|||+|+.=|+. +..-=|.+||++||
T Consensus 161 ~vvVIG~s~---iVG~-p~A~lL~~-----~gAtVtv~hs~t~~L~~---~~~~ADIVI~Avg~p~lI~~~~vk~GavVI 228 (288)
T 1b0a_A 161 NAVVIGASN---IVGR-PMSMELLL-----AGCTTTVTHRFTKNLRH---HVENADLLIVAVGKPGFIPGDWIKEGAIVI 228 (288)
T ss_dssp EEEEECCCT---TTHH-HHHHHHHT-----TTCEEEEECSSCSCHHH---HHHHCSEEEECSCCTTCBCTTTSCTTCEEE
T ss_pred EEEEECCCh---HHHH-HHHHHHHH-----CCCeEEEEeCCchhHHH---HhccCCEEEECCCCcCcCCHHHcCCCcEEE
Confidence 688998764 2211 13333433 46788887755555655 556999999999876 55444669999999
Q ss_pred EEe
Q 017449 273 EFF 275 (371)
Q Consensus 273 Ei~ 275 (371)
-+-
T Consensus 229 DVg 231 (288)
T 1b0a_A 229 DVG 231 (288)
T ss_dssp ECC
T ss_pred Ecc
Confidence 986
No 19
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=36.62 E-value=46 Score=28.81 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=29.7
Q ss_pred HHHhhccccCCceEEEEEc--CCCCHHHHHHHhc--cCcEEEeechhhhhh
Q 017449 215 IFEKECAKIDGCRMTVAYS--NNLTFCEQVKLMS--MTDILVSPHGAQLTN 261 (371)
Q Consensus 215 ~l~~~~~~~~g~~~~vv~~--~~~s~~eQv~l~~--~advlig~HGAgLtN 261 (371)
.|++.+.+..|++|....- ..+++.+-+++.+ .||++|+.|-.+..|
T Consensus 36 ~l~~~L~~~~G~~V~ltR~~D~~~~L~~R~~~an~~~adlfiSiH~Na~~~ 86 (179)
T 1jwq_A 36 KVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGS 86 (179)
T ss_dssp HHHHHHHTCTTEEEEESCSSSCCCCHHHHHHHHHHTTCSEEEEEEEECCSS
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCCHHHHHHHHHhhCCCEEEEEccCCCCC
Confidence 4444333233555544433 2468888888776 699999999776544
No 20
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=35.88 E-value=51 Score=30.61 Aligned_cols=71 Identities=6% Similarity=0.063 Sum_probs=42.5
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhhhhh-------hhccC
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQLTN-------IFLMD 266 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAgLtN-------~lFm~ 266 (371)
+|++++|+. ...+++.+.+.... +++.+....+++ +. +.+.++|+||..-.+|+.. .-+++
T Consensus 153 ~v~i~~R~~----~~a~~la~~~~~~~---~~~~i~~~~~~~--l~---~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~ 220 (283)
T 3jyo_A 153 KLQVADLDT----SRAQALADVINNAV---GREAVVGVDARG--IE---DVIAAADGVVNATPMGMPAHPGTAFDVSCLT 220 (283)
T ss_dssp EEEEECSSH----HHHHHHHHHHHHHH---TSCCEEEECSTT--HH---HHHHHSSEEEECSSTTSTTSCSCSSCGGGCC
T ss_pred EEEEEECCH----HHHHHHHHHHHhhc---CCceEEEcCHHH--HH---HHHhcCCEEEECCCCCCCCCCCCCCCHHHhC
Confidence 466666543 22345555555432 344555554433 22 3567899999888887753 22567
Q ss_pred CCcEEEEEee
Q 017449 267 RNSSVMEFFP 276 (371)
Q Consensus 267 pgs~viEi~P 276 (371)
++.+|++++-
T Consensus 221 ~~~~v~DlvY 230 (283)
T 3jyo_A 221 KDHWVGDVVY 230 (283)
T ss_dssp TTCEEEECCC
T ss_pred CCCEEEEecC
Confidence 8888899873
No 21
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=34.42 E-value=64 Score=28.12 Aligned_cols=58 Identities=12% Similarity=0.191 Sum_probs=37.9
Q ss_pred eEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEE-EEEcCCCC--------------HHHHHHHhccCcEEEe
Q 017449 193 VGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMT-VAYSNNLT--------------FCEQVKLMSMTDILVS 253 (371)
Q Consensus 193 ~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~-vv~~~~~s--------------~~eQv~l~~~advlig 253 (371)
.+|++|. ...|+=.|-..+++.+.+.+. .|.+++ ++++.+++ +.+-.+.+.+||.+|=
T Consensus 7 mkIl~I~-GS~r~~s~t~~la~~~~~~~~--~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi 79 (199)
T 4hs4_A 7 LHFVTLL-GSLRKASFNAAVARALPEIAP--EGIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVI 79 (199)
T ss_dssp EEEEEEE-CCCSTTCHHHHHHHHHHHHCC--TTEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEE
T ss_pred CEEEEEE-cCCCCCChHHHHHHHHHHHcc--CCCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEE
Confidence 5678887 334554556677777766553 467888 77775554 3345667889998873
No 22
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=34.32 E-value=59 Score=27.05 Aligned_cols=54 Identities=13% Similarity=0.077 Sum_probs=34.5
Q ss_pred eEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEE
Q 017449 193 VGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILV 252 (371)
Q Consensus 193 ~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advli 252 (371)
+-|+|-|..| |-+.+++++.+.+. ..|++++++++.+.+..+-+..+.++|.+|
T Consensus 3 v~IvY~S~tG-----nT~~~A~~ia~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii 56 (161)
T 3hly_A 3 VLIGYLSDYG-----YSDRLSQAIGRGLV-KTGVAVEMVDLRAVDPQELIEAVSSARGIV 56 (161)
T ss_dssp EEEEECTTST-----THHHHHHHHHHHHH-HTTCCEEEEETTTCCHHHHHHHHHHCSEEE
T ss_pred EEEEEECCCh-----HHHHHHHHHHHHHH-hCCCeEEEEECCCCCHHHHHHHHHhCCEEE
Confidence 3456666654 44444444444332 146788889988888887777777888655
No 23
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=32.80 E-value=66 Score=27.50 Aligned_cols=67 Identities=13% Similarity=0.049 Sum_probs=38.8
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhh-ccccCCceEEEEEcCCCCH-------------HHHHHHhccCcEEEe---ech
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKE-CAKIDGCRMTVAYSNNLTF-------------CEQVKLMSMTDILVS---PHG 256 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~-~~~~~g~~~~vv~~~~~s~-------------~eQv~l~~~advlig---~HG 256 (371)
+|++|. ...|+=.|-..+++.+.+. +.. .|.+++++++.++++ .+-.+.+.++|.+|= ++.
T Consensus 4 kilii~-gS~r~~g~t~~la~~i~~~~l~~-~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~y~ 81 (197)
T 2vzf_A 4 SIVAIS-GSPSRNSTTAKLAEYALAHVLAR-SDSQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPIYK 81 (197)
T ss_dssp EEEEEE-CCSSTTCHHHHHHHHHHHHHHHH-SSEEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEECBT
T ss_pred eEEEEE-CCCCCCChHHHHHHHHHHHHHHH-CCCeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCccC
Confidence 456665 2234444556666655443 321 377899999877754 334567888998773 344
Q ss_pred hhhhhh
Q 017449 257 AQLTNI 262 (371)
Q Consensus 257 AgLtN~ 262 (371)
.+++-.
T Consensus 82 ~~~p~~ 87 (197)
T 2vzf_A 82 ASYTGL 87 (197)
T ss_dssp TBCCHH
T ss_pred CCCCHH
Confidence 444433
No 24
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=29.53 E-value=74 Score=29.87 Aligned_cols=70 Identities=14% Similarity=0.203 Sum_probs=47.1
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccC--CceEEEEEcCCCCHHHHHHHhccCcEEEeechhh-hhhhhccCCCcE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKID--GCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ-LTNIFLMDRNSS 270 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~--g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg-LtN~lFm~pgs~ 270 (371)
++++|.|++ ++... +...|.. . +..+.+....+-.+. +.+.+|||+|+.=|+. +...=|.+||++
T Consensus 160 ~vvVvG~s~---iVG~p-~A~lL~~-----~g~~atVtv~h~~t~~L~---~~~~~ADIVI~Avg~p~~I~~~~vk~Gav 227 (281)
T 2c2x_A 160 HVVVIGRGV---TVGRP-LGLLLTR-----RSENATVTLCHTGTRDLP---ALTRQADIVVAAVGVAHLLTADMVRPGAA 227 (281)
T ss_dssp EEEEECCCT---TTHHH-HHHHHTS-----TTTCCEEEEECTTCSCHH---HHHTTCSEEEECSCCTTCBCGGGSCTTCE
T ss_pred EEEEECCCc---HHHHH-HHHHHhc-----CCCCCEEEEEECchhHHH---HHHhhCCEEEECCCCCcccCHHHcCCCcE
Confidence 689998864 22111 2233333 3 577887765554554 4667999999999976 655556799999
Q ss_pred EEEEe
Q 017449 271 VMEFF 275 (371)
Q Consensus 271 viEi~ 275 (371)
||-+-
T Consensus 228 VIDVg 232 (281)
T 2c2x_A 228 VIDVG 232 (281)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99885
No 25
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=27.76 E-value=86 Score=27.61 Aligned_cols=68 Identities=10% Similarity=-0.013 Sum_probs=47.5
Q ss_pred eEEEEEEcCCC--CcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhhhhhhhcc
Q 017449 193 VGMTLLMRTGP--RSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQLTNIFLM 265 (371)
Q Consensus 193 ~rv~~i~R~~~--R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAgLtN~lFm 265 (371)
.||+||.=... ..=.|...+.+++++ .|+++.++.+.+.+..+-.+.+.+||.|+=+-|+..+=+=.+
T Consensus 28 ~~i~~Ip~As~~~~~~~~~~s~~~a~~~-----lG~~v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L 97 (206)
T 3l4e_A 28 KTVTFIPTASTVEEVTFYVEAGKKALES-----LGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQEL 97 (206)
T ss_dssp CEEEEECGGGGGCSCCHHHHHHHHHHHH-----TTCEEEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHH-----cCCeEEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHH
Confidence 47899974321 222366788888887 688888887766677777788899999997667665443333
No 26
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=25.52 E-value=84 Score=26.39 Aligned_cols=58 Identities=16% Similarity=0.221 Sum_probs=32.6
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhcccc-----CCceEEEEEcCC--CC-----------------------HHHHHH
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKI-----DGCRMTVAYSNN--LT-----------------------FCEQVK 243 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~-----~g~~~~vv~~~~--~s-----------------------~~eQv~ 243 (371)
+|++|.=. .|.=.|-..+++.+.+.+... +|.+++++++.+ ++ +.+-++
T Consensus 2 kilii~gS-~r~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (191)
T 1t0i_A 2 KVGIIMGS-VRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSR 80 (191)
T ss_dssp EEEEEECC-CCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHH
T ss_pred eEEEEeCC-CCCCCchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHH
Confidence 35555522 232246666666655544322 367888887632 21 134457
Q ss_pred HhccCcEEE
Q 017449 244 LMSMTDILV 252 (371)
Q Consensus 244 l~~~advli 252 (371)
.+.+||+||
T Consensus 81 ~l~~aD~iI 89 (191)
T 1t0i_A 81 IVNALDIIV 89 (191)
T ss_dssp HHHTCSEEE
T ss_pred HHHhCCEEE
Confidence 788999887
No 27
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=25.42 E-value=84 Score=27.14 Aligned_cols=58 Identities=9% Similarity=0.058 Sum_probs=37.1
Q ss_pred eEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEE-EEEcCCCCH---------------HHHHHHhccCcEEEe
Q 017449 193 VGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMT-VAYSNNLTF---------------CEQVKLMSMTDILVS 253 (371)
Q Consensus 193 ~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~-vv~~~~~s~---------------~eQv~l~~~advlig 253 (371)
.||++|.= ..|+=.|-..+++.+.+.. ..|.+++ ++++.++++ .+-.+.+.+||.+|=
T Consensus 5 mkil~I~G-S~r~~s~t~~l~~~~~~~~--~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD~iv~ 78 (193)
T 3svl_A 5 LQVVTLLG-SLRKGSFNGMVARTLPKIA--PASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVI 78 (193)
T ss_dssp EEEEEEEC-CCSTTCHHHHHHHHGGGTS--CTTEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSSEEEE
T ss_pred CEEEEEEc-cCCCCCHHHHHHHHHHHHc--cCCCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCCEEEE
Confidence 57888873 3444455567777776543 2577888 777765543 234578888998773
No 28
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=24.43 E-value=87 Score=28.31 Aligned_cols=27 Identities=26% Similarity=0.353 Sum_probs=21.8
Q ss_pred CCCHHHHHHHhc--cCcEEEeechhhhhh
Q 017449 235 NLTFCEQVKLMS--MTDILVSPHGAQLTN 261 (371)
Q Consensus 235 ~~s~~eQv~l~~--~advlig~HGAgLtN 261 (371)
.+++.+-+++.+ .||++|+.|-.+..+
T Consensus 60 ~~~l~~R~~~An~~~adlfiSiH~Na~~~ 88 (234)
T 3ne8_A 60 FLRLSERVKKAQEFDADLFISIHADTIDV 88 (234)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEEECCCCSC
T ss_pred cCCHHHHHHHHHhhCCCEEEEEecCCCCC
Confidence 468888888876 799999999776654
No 29
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=23.74 E-value=1e+02 Score=27.56 Aligned_cols=29 Identities=7% Similarity=0.242 Sum_probs=23.6
Q ss_pred CCceEEEEEcC-CCCHHHHHHHhccCcEEE
Q 017449 224 DGCRMTVAYSN-NLTFCEQVKLMSMTDILV 252 (371)
Q Consensus 224 ~g~~~~vv~~~-~~s~~eQv~l~~~advli 252 (371)
.|.++++++++ ...+.+-++.+..||+||
T Consensus 59 ~g~ev~~~dL~~~~Dv~~~~~~l~~aD~iv 88 (218)
T 3rpe_A 59 SGHQVKITTVDQGYDIESEIENYLWADTII 88 (218)
T ss_dssp TTCCEEEEEGGGCCCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEEECCCccCHHHHHHHHHhCCEEE
Confidence 57789999884 567888888999999876
No 30
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=23.55 E-value=1.2e+02 Score=26.35 Aligned_cols=67 Identities=7% Similarity=0.130 Sum_probs=36.1
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCH-------------HHHHHHhccCcEEEee----c-
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTF-------------CEQVKLMSMTDILVSP----H- 255 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~-------------~eQv~l~~~advlig~----H- 255 (371)
+|++|.= ..|.=.+-..+.+.+.+.+. .+++++++++.++++ .+-.+.+.+||.+|=+ +
T Consensus 4 ~I~vi~G-S~R~~S~~~~la~~~~~~~~--~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPeYn~ 80 (190)
T 3u7r_A 4 TVAVMVG-SLRKDSLNHKLMKVLQKLAE--GRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEYNR 80 (190)
T ss_dssp EEEEEES-CCSTTCHHHHHHHHHHHHHT--TTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCCBTT
T ss_pred EEEEEEC-CCCCCCHHHHHHHHHHHhcc--CCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechhhcc
Confidence 4666652 12222222344555554432 467888888765543 2334678899977632 2
Q ss_pred --hhhhhhhh
Q 017449 256 --GAQLTNIF 263 (371)
Q Consensus 256 --GAgLtN~l 263 (371)
-+.|=|++
T Consensus 81 s~pg~LKn~i 90 (190)
T 3u7r_A 81 SYPGMIKNAI 90 (190)
T ss_dssp BCCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 24566665
No 31
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=23.27 E-value=1.7e+02 Score=27.51 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=31.4
Q ss_pred CHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEE
Q 017449 208 NEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILV 252 (371)
Q Consensus 208 Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advli 252 (371)
|-..+++.+.+.+. ..|++++++++.+.+..+-...+.++|.+|
T Consensus 269 nT~~la~~i~~~l~-~~g~~v~~~~~~~~~~~~~~~~l~~~d~ii 312 (404)
T 2ohh_A 269 STRKMAHAIAEGAM-SEGVDVRVYCLHEDDRSEIVKDILESGAIA 312 (404)
T ss_dssp HHHHHHHHHHHHHH-TTTCEEEEEETTTSCHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHH-hCCCeEEEEECCCCCHHHHHHHHHHCCEEE
Confidence 55555555555432 156789999998888887777888899876
No 32
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=22.91 E-value=1.6e+02 Score=26.04 Aligned_cols=41 Identities=12% Similarity=0.236 Sum_probs=20.6
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCC
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNL 236 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~ 236 (371)
+|++|.=. +|.=.|-..+.+.+.+.+.+ .|.+++++++.++
T Consensus 3 kiLiI~gs-pr~~S~t~~l~~~~~~~l~~-~g~ev~~~dL~~~ 43 (228)
T 3tem_A 3 KVLIVYAH-QEPKSFNGSLKNVAVDELSR-QGCTVTVSDLYAM 43 (228)
T ss_dssp EEEEEECC-SCTTSHHHHHHHHHHHHHHH-HTCEEEEEETTTT
T ss_pred EEEEEEeC-CCCCCHHHHHHHHHHHHHHH-CCCEEEEEEhhhc
Confidence 56677632 23223334444333332211 3678999987543
No 33
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=22.27 E-value=2e+02 Score=23.94 Aligned_cols=42 Identities=10% Similarity=0.059 Sum_probs=20.9
Q ss_pred EEEEEEcCCCCc-ccCHHHHHHHHHhhccc-cCCceEEEEEcCCC
Q 017449 194 GMTLLMRTGPRS-FTNEPAIIGIFEKECAK-IDGCRMTVAYSNNL 236 (371)
Q Consensus 194 rv~~i~R~~~R~-i~Ne~ev~~~l~~~~~~-~~g~~~~vv~~~~~ 236 (371)
+|++|.=. .|. =.|-..+++.+.+.+.. .++.+++++++.+.
T Consensus 3 kilii~~S-~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~ 46 (201)
T 1t5b_A 3 KVLVLKSS-ILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAAN 46 (201)
T ss_dssp EEEEEECC-SSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTS
T ss_pred eEEEEEeC-CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCC
Confidence 45555522 232 23445555444443321 23578999987554
No 34
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=21.84 E-value=1.5e+02 Score=26.92 Aligned_cols=41 Identities=7% Similarity=0.014 Sum_probs=20.6
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCC
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNL 236 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~ 236 (371)
+|++|.=. .|.=.|-..+.+++.+.+.. .|.+++++++.++
T Consensus 4 kiLiI~gS-pr~~s~t~~la~~~~~~l~~-~g~eV~~~dL~~~ 44 (273)
T 1d4a_A 4 RALIVLAH-SERTSFNYAMKEAAAAALKK-KGWEVVESDLYAM 44 (273)
T ss_dssp EEEEEECC-SCTTSHHHHHHHHHHHHHHH-TTCEEEEEETTTT
T ss_pred EEEEEEeC-CCCccHHHHHHHHHHHHHHh-CCCeEEEEEcccc
Confidence 45666532 22222334444444332211 5778999987544
No 35
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=20.66 E-value=1.5e+02 Score=25.38 Aligned_cols=23 Identities=13% Similarity=0.066 Sum_probs=17.6
Q ss_pred CHHHHHHHhc--cCcEEEeechhhh
Q 017449 237 TFCEQVKLMS--MTDILVSPHGAQL 259 (371)
Q Consensus 237 s~~eQv~l~~--~advlig~HGAgL 259 (371)
++.+-+++.+ .||++|+.|-.+.
T Consensus 65 ~L~~R~~~An~~~aDlfISIH~Na~ 89 (180)
T 3qay_A 65 EKSYKIPRVNSGGYDLLIELHLNAS 89 (180)
T ss_dssp HHHHHHHHHHHSCCSEEEEEEEECS
T ss_pred CHHHHHHHHHhcCCCEEEEeeeCCC
Confidence 3777777664 5999999997764
No 36
>2bsj_A Chaperone protein SYCT; type III secretion, effector, YOPT; 1.83A {Yersinia enterocolitica} PDB: 2bho_A 2bsh_A 2bsi_A
Probab=20.36 E-value=80 Score=25.78 Aligned_cols=28 Identities=11% Similarity=0.414 Sum_probs=25.5
Q ss_pred eecccchHHHHHHHHHHHHHHhhhhccc
Q 017449 331 IGYNETYFSEWARNVLNEVKTMKLEKSQ 358 (371)
Q Consensus 331 v~in~~~f~~~l~~vl~~~~~~~~~~~~ 358 (371)
+.+|+..+..|+...++++++|+...-+
T Consensus 93 ~~ldvaelqAWlErFIdDieqr~~p~~t 120 (133)
T 2bsj_A 93 VGLDIDEMQAWLERFIDDIEQRKEPQNT 120 (133)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHTSGGGG
T ss_pred ccccHHHHHHHHHHHHHHHHHhcCCccc
Confidence 6789999999999999999999988666
No 37
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=20.32 E-value=1.9e+02 Score=24.51 Aligned_cols=11 Identities=0% Similarity=-0.118 Sum_probs=8.5
Q ss_pred CCceEEEEEcC
Q 017449 224 DGCRMTVAYSN 234 (371)
Q Consensus 224 ~g~~~~vv~~~ 234 (371)
++.+++++++.
T Consensus 35 ~~~~v~~~dL~ 45 (208)
T 2hpv_A 35 PSDEIEILDVY 45 (208)
T ss_dssp TTSEEEEEETT
T ss_pred CCCeEEEeeCC
Confidence 35789998876
No 38
>1fme_A FSD-EY peptide; beta-BETA-alpha, zinc finger, designed protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1fsd_A 1fsv_A 2k6r_A* 1psv_A
Probab=20.06 E-value=65 Score=19.19 Aligned_cols=17 Identities=35% Similarity=0.518 Sum_probs=15.0
Q ss_pred CCCcccCHHHHHHHHHh
Q 017449 202 GPRSFTNEPAIIGIFEK 218 (371)
Q Consensus 202 ~~R~i~Ne~ev~~~l~~ 218 (371)
..|.+.||.|+.+.+++
T Consensus 8 kgrtfrnekelrdfiek 24 (28)
T 1fme_A 8 KGRTFRNEKELRDFIEK 24 (28)
T ss_dssp SSCEECCHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHH
Confidence 46999999999999986
Done!