Query 017449
Match_columns 371
No_of_seqs 250 out of 585
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 14:37:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017449.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017449hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fzva1 c.23.5.4 (A:1-233) Put 68.8 5.3 0.00039 34.3 7.1 62 189-252 31-104 (233)
2 d1e5da1 c.23.5.1 (A:251-402) R 68.6 4.4 0.00032 31.5 6.1 61 192-259 4-68 (152)
3 d1t1ra3 c.2.1.3 (A:275-300) 1- 65.8 1.2 8.7E-05 25.7 1.3 21 39-59 3-23 (26)
4 d1b0aa1 c.2.1.7 (A:123-288) Me 62.9 21 0.0016 28.9 9.5 81 176-275 28-109 (166)
5 d1ycga1 c.23.5.1 (A:251-399) N 60.1 5.7 0.00042 30.7 5.2 54 192-252 4-58 (149)
6 d1a4ia1 c.2.1.7 (A:127-296) Me 56.0 30 0.0022 28.0 9.2 82 176-276 30-112 (170)
7 d2qwxa1 c.23.5.3 (A:1-230) Qui 44.4 15 0.0011 30.3 5.5 35 194-235 4-43 (230)
8 d1rlia_ c.23.5.6 (A:) Hypothet 41.8 19 0.0014 28.0 5.6 54 194-254 1-74 (179)
9 d1vmea1 c.23.5.1 (A:251-398) R 40.6 29 0.0021 26.3 6.5 55 192-252 5-62 (148)
10 d1ydga_ c.23.5.8 (A:) Trp repr 34.3 19 0.0014 29.1 4.6 54 192-252 4-79 (201)
11 d1gdha2 c.23.12.1 (A:2-100,A:2 33.2 51 0.0037 24.8 6.7 67 209-281 11-80 (129)
12 d1rtta_ c.23.5.4 (A:) Hypothet 30.1 23 0.0017 28.1 4.3 56 194-252 2-71 (174)
13 d1dxya1 c.2.1.4 (A:101-299) D- 28.8 5.1 0.00037 33.4 -0.3 52 205-258 136-198 (199)
14 d1qp8a1 c.2.1.4 (A:83-263) Put 28.3 17 0.0012 29.6 3.0 51 205-258 131-181 (181)
15 d2a5la1 c.23.5.8 (A:3-198) Trp 25.9 12 0.00091 29.8 1.7 55 191-252 2-72 (196)
16 d1j4aa1 c.2.1.4 (A:104-300) D- 25.2 16 0.0011 30.2 2.3 51 205-257 135-196 (197)
17 d1t0ia_ c.23.5.4 (A:) Hypothet 24.0 57 0.0041 25.8 5.7 39 194-233 2-45 (185)
18 d1jwqa_ c.56.5.6 (A:) N-acetyl 23.2 51 0.0037 25.9 5.2 49 213-261 34-86 (179)
19 d1d4aa_ c.23.5.3 (A:) NAD(P)H: 22.7 69 0.005 27.3 6.3 16 238-253 84-99 (273)
20 d1y9ua_ c.94.1.1 (A:) Ferric-b 22.2 70 0.0051 25.9 6.2 45 210-259 15-62 (318)
21 d1sc6a1 c.2.1.4 (A:108-295) Ph 22.2 13 0.00093 30.3 1.1 53 204-258 134-188 (188)
22 d1xova2 c.56.5.6 (A:1-180) End 21.3 82 0.006 25.0 6.2 34 224-257 41-81 (180)
23 d1ygya1 c.2.1.4 (A:99-282) Pho 21.2 11 0.00079 30.7 0.4 46 205-255 137-182 (184)
24 d1sqsa_ c.23.5.5 (A:) Hypothet 21.2 82 0.0059 25.8 6.4 15 238-252 70-84 (232)
25 d1f0ya2 c.2.1.6 (A:12-203) Sho 20.2 51 0.0037 26.4 4.6 62 210-281 105-167 (192)
No 1
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}
Probab=68.83 E-value=5.3 Score=34.30 Aligned_cols=62 Identities=15% Similarity=0.075 Sum_probs=37.5
Q ss_pred CCCeeEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCC------------HHHHHHHhccCcEEE
Q 017449 189 NHKAVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLT------------FCEQVKLMSMTDILV 252 (371)
Q Consensus 189 ~~~~~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s------------~~eQv~l~~~advli 252 (371)
+.|++||++|.=. .|+=.|-..+++.+.+.+. ..|.+++++++.+++ +.+-.+.+..||.+|
T Consensus 31 ~~~~~KIl~I~GS-~R~~s~s~~la~~~~~~l~-~~G~ev~~idL~dlpl~~~~~~~~~~~v~~l~~~l~~AD~vI 104 (233)
T d2fzva1 31 DAPPVRILLLYGS-LRARSFSRLAVEEAARLLQ-FFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQV 104 (233)
T ss_dssp CCSCCEEEEEESC-CSSSCHHHHHHHHHHHHHH-HTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEE
T ss_pred CCCCCeEEEEeCC-CCCCCHHHHHHHHHHHHhh-hcCeEEEEEccCCCCCCCcccccCCHHHHHHHHHHhhcCeeE
Confidence 3446789999832 3443444444443333221 258899999886654 445567788888776
No 2
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=68.63 E-value=4.4 Score=31.54 Aligned_cols=61 Identities=10% Similarity=0.207 Sum_probs=42.0
Q ss_pred eeEEEEEEcCCC-CcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEE---eechhhh
Q 017449 192 AVGMTLLMRTGP-RSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILV---SPHGAQL 259 (371)
Q Consensus 192 ~~rv~~i~R~~~-R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advli---g~HGAgL 259 (371)
++-|+|-+..|+ +++. +++.+.|++ .|+++++++....+..+-+..+.++|.+| ..|+.++
T Consensus 4 Ki~IiY~S~tGnTe~~A--~~Ia~~l~~-----~g~ev~~~~~~~~~~~~~~~~l~~~d~vi~Gspt~~~~~ 68 (152)
T d1e5da1 4 KVVIFYDSMWHSTEKMA--RVLAESFRD-----EGCTVKLMWCKACHHSQIMSEISDAGAVIVGSPTHNNGI 68 (152)
T ss_dssp EEEEEECCSSSHHHHHH--HHHHHHHHH-----TTCEEEEEETTTSCHHHHHHHHHTCSEEEEECCCBTTBC
T ss_pred eEEEEEECCCcHHHHHH--HHHHHHHhh-----CCCEEEEeecccCChhhhccchhhCCEEEEeccccCCcc
Confidence 455777787763 4443 344455544 57899999998889988888899999776 3455443
No 3
>d1t1ra3 c.2.1.3 (A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=65.80 E-value=1.2 Score=25.69 Aligned_cols=21 Identities=14% Similarity=0.282 Sum_probs=16.3
Q ss_pred CchhhhhhcCccCCCceeeec
Q 017449 39 SWNYYALAWPKALPYNATLMK 59 (371)
Q Consensus 39 ~~~~~~~~w~~a~p~~~~~~~ 59 (371)
|.=+|+|+|++.+..++.-++
T Consensus 3 tPIA~aLa~PeRi~sgv~~LD 23 (26)
T d1t1ra3 3 TPIAHTMAWPNRVNSGVKPLD 23 (26)
T ss_dssp HHHHHHHHTTSCCCCCCCCCC
T ss_pred chhhhhccCccccccCCcccc
Confidence 345899999999988876543
No 4
>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=62.90 E-value=21 Score=28.87 Aligned_cols=81 Identities=11% Similarity=0.059 Sum_probs=54.7
Q ss_pred HHHcCCCCCCCCCCCCeeEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeec
Q 017449 176 RMYCNVSLDNKDDNHKAVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPH 255 (371)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~H 255 (371)
+++++++.. ++ ++++|.|.. +--.-+...|.+ .|+.+.+....+-.+.+ ...+|||+|..=
T Consensus 28 L~~y~i~l~----GK---~v~VIGrS~----~VG~Pla~lL~~-----~gatVt~~h~~t~~l~~---~~~~ADivI~a~ 88 (166)
T d1b0aa1 28 LERYNIDTF----GL---NAVVIGASN----IVGRPMSMELLL-----AGCTTTVTHRFTKNLRH---HVENADLLIVAV 88 (166)
T ss_dssp HHHTTCCCT----TC---EEEEECCCT----TTHHHHHHHHHT-----TTCEEEEECSSCSCHHH---HHHHCSEEEECS
T ss_pred HHHcCcccc----cc---eEEEEeccc----cccHHHHHHHHH-----hhccccccccccchhHH---HHhhhhHhhhhc
Confidence 345777653 22 588998764 223334555655 46788777766666654 457999999877
Q ss_pred h-hhhhhhhccCCCcEEEEEe
Q 017449 256 G-AQLTNIFLMDRNSSVMEFF 275 (371)
Q Consensus 256 G-AgLtN~lFm~pgs~viEi~ 275 (371)
| +++...=|.+||++||.+-
T Consensus 89 G~p~~i~~~~vk~g~vvIDvG 109 (166)
T d1b0aa1 89 GKPGFIPGDWIKEGAIVIDVG 109 (166)
T ss_dssp CCTTCBCTTTSCTTCEEEECC
T ss_pred cCcccccccccCCCcEEEecC
Confidence 7 4555566889999999873
No 5
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=60.05 E-value=5.7 Score=30.71 Aligned_cols=54 Identities=7% Similarity=0.019 Sum_probs=38.0
Q ss_pred eeEEEEEEcCCC-CcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEE
Q 017449 192 AVGMTLLMRTGP-RSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILV 252 (371)
Q Consensus 192 ~~rv~~i~R~~~-R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advli 252 (371)
++-|+|-|+.|+ +++. +.|.+.+++ .|.++++++....+..+-...+.++|.+|
T Consensus 4 K~lIvY~S~~GnT~~vA--~~Ia~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~d~ii 58 (149)
T d1ycga1 4 KAVIAYDTMWLSTEKMA--HALMDGLVA-----GGCEVKLFKLSVSDRNDVIKEILDARAVL 58 (149)
T ss_dssp EEEEEECCSSSHHHHHH--HHHHHHHHH-----TTCEEEEEEGGGSCHHHHHHHHHHCSEEE
T ss_pred EEEEEEECCCcHHHHHH--HHHHHHHHh-----cCCeeEEEEccccchHHHhhhhhhCCeEE
Confidence 455777787763 4443 344455554 57889999988888888888888888776
No 6
>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.99 E-value=30 Score=27.99 Aligned_cols=82 Identities=13% Similarity=0.110 Sum_probs=56.6
Q ss_pred HHHcCCCCCCCCCCCCeeEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeec
Q 017449 176 RMYCNVSLDNKDDNHKAVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPH 255 (371)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~H 255 (371)
+++++++.. ++ ++++|.|.. +--.-+...|.+ .|+.+.+....+-...+ ...+|||+|...
T Consensus 30 L~~~~i~l~----Gk---~vvVIGrS~----iVGrPLa~lL~~-----~gatVt~~~~~t~~l~~---~~~~aDivi~a~ 90 (170)
T d1a4ia1 30 IKETGVPIA----GR---HAVVVGRSK----IVGAPMHDLLLW-----NNATVTTCHSKTAHLDE---EVNKGDILVVAT 90 (170)
T ss_dssp HHTTTCCCT----TC---EEEEECCCT----TTHHHHHHHHHH-----TTCEEEEECTTCSSHHH---HHTTCSEEEECC
T ss_pred HHHhCcccc----cc---eEEEEecCC----ccchHHHHHHHh-----ccCceEEEecccccHHH---HHhhccchhhcc
Confidence 456788753 22 589998764 222334455555 46788888877777664 566999999666
Q ss_pred h-hhhhhhhccCCCcEEEEEee
Q 017449 256 G-AQLTNIFLMDRNSSVMEFFP 276 (371)
Q Consensus 256 G-AgLtN~lFm~pgs~viEi~P 276 (371)
| +++...=|.+||+.||.+-.
T Consensus 91 G~~~~i~~~~vk~g~iviDvgi 112 (170)
T d1a4ia1 91 GQPEMVKGEWIKPGAIVIDCGI 112 (170)
T ss_dssp CCTTCBCGGGSCTTCEEEECCC
T ss_pred ccccccccccccCCCeEeccCc
Confidence 5 56666778899999999843
No 7
>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione reductase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.38 E-value=15 Score=30.35 Aligned_cols=35 Identities=14% Similarity=0.278 Sum_probs=21.4
Q ss_pred EEEEEEc---CC--CCcccCHHHHHHHHHhhccccCCceEEEEEcCC
Q 017449 194 GMTLLMR---TG--PRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNN 235 (371)
Q Consensus 194 rv~~i~R---~~--~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~ 235 (371)
||++|.= .+ ++.+. +++++.+++ .|.+++++++.+
T Consensus 4 KiLiI~ghp~~~S~t~~l~--~~~~~~~~~-----~g~ev~~~dL~~ 43 (230)
T d2qwxa1 4 KVLIVYAHQEPKSFNGSLK--NVAVDELSR-----QGCTVTVSDLYA 43 (230)
T ss_dssp EEEEEECCSCTTSHHHHHH--HHHHHHHHH-----TTCEEEEEETTT
T ss_pred EEEEEEeCCCCccHHHHHH--HHHHHHHHh-----CCCEEEEEEccc
Confidence 5777762 22 13332 566666766 577899998743
No 8
>d1rlia_ c.23.5.6 (A:) Hypothetical protein YwqN {Bacillus subtilis [TaxId: 1423]}
Probab=41.79 E-value=19 Score=27.97 Aligned_cols=54 Identities=15% Similarity=0.185 Sum_probs=31.2
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCC--------------------HHHHHHHhccCcEEEe
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLT--------------------FCEQVKLMSMTDILVS 253 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s--------------------~~eQv~l~~~advlig 253 (371)
||++|.= .+|+=.|-..+++++.+ |++.+.+++.++. +.+-++.+.+||++|=
T Consensus 1 KIlii~g-Spr~~gnt~~l~~~~~~------g~e~e~i~l~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~l~~AD~ii~ 73 (179)
T d1rlia_ 1 KIAVING-GTRSGGNTDVLAEKAVQ------GFDAEHIYLQKYPIQPIEDLRHAQGGFRPVQDDYDSIIERILQCHILIF 73 (179)
T ss_dssp CEEEEES-SCSSCCHHHHHHHHHHT------TTCCEEEEC-----------------------CHHHHHHHHHTCSEEEE
T ss_pred CEEEEEC-CCCCCCHHHHHHHHHHc------CCCeeEEEhhhhccCCccchhhhhcCCCCccHHHHHHHHHHHhCCeEEE
Confidence 3566662 34544566777777654 4455666553332 4455678889998874
Q ss_pred e
Q 017449 254 P 254 (371)
Q Consensus 254 ~ 254 (371)
.
T Consensus 74 ~ 74 (179)
T d1rlia_ 74 A 74 (179)
T ss_dssp E
T ss_pred e
Confidence 3
No 9
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=40.55 E-value=29 Score=26.26 Aligned_cols=55 Identities=13% Similarity=0.010 Sum_probs=34.6
Q ss_pred eeEEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcC---CCCHHHHHHHhccCcEEE
Q 017449 192 AVGMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSN---NLTFCEQVKLMSMTDILV 252 (371)
Q Consensus 192 ~~rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~---~~s~~eQv~l~~~advli 252 (371)
++-|+|-|..|+ -+.+++.+.+.+. ..|+++.+.++. ..++.+...-+.++|.+|
T Consensus 5 kv~IiY~S~tGn-----Te~~A~~i~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~l~~~d~ii 62 (148)
T d1vmea1 5 KVTVIYDSMYGF-----VENVMKKAIDSLK-EKGFTPVVYKFSDEERPAISEILKDIPDSEALI 62 (148)
T ss_dssp EEEEEEECSSSH-----HHHHHHHHHHHHH-HTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEE
T ss_pred EEEEEEECCCcH-----HHHHHHHHHHHHH-hCCCeEEEEecccccccchhHhhhhHHHCCEeE
Confidence 566888887763 3444444443321 156788877764 446788888888888754
No 10
>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]}
Probab=34.33 E-value=19 Score=29.06 Aligned_cols=54 Identities=7% Similarity=0.065 Sum_probs=33.8
Q ss_pred eeEEEEEEcCC-CCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHH---------------------HHHHHhccCc
Q 017449 192 AVGMTLLMRTG-PRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFC---------------------EQVKLMSMTD 249 (371)
Q Consensus 192 ~~rv~~i~R~~-~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~---------------------eQv~l~~~ad 249 (371)
++-|++-|+.| ++.+. +++.+.+++ .|.+++++.+.++.+. +.++.+.++|
T Consensus 4 kilivy~S~~GnT~~la--~~ia~g~~~-----~G~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~aD 76 (201)
T d1ydga_ 4 KLAIVFYSSTGTGYAMA--QEAAEAGRA-----AGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAE 76 (201)
T ss_dssp EEEEEECCSSSHHHHHH--HHHHHHHHH-----TTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCS
T ss_pred EEEEEEeCCCcHHHHHH--HHHHHHHHh-----cCCEEEEEEccccCccchhhhhhHhhcCCCcccCchhhhhhhHhhCC
Confidence 34455666665 34443 455666655 6889999987654322 2255778899
Q ss_pred EEE
Q 017449 250 ILV 252 (371)
Q Consensus 250 vli 252 (371)
.||
T Consensus 77 ~ii 79 (201)
T d1ydga_ 77 AIV 79 (201)
T ss_dssp EEE
T ss_pred EeE
Confidence 887
No 11
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}
Probab=33.16 E-value=51 Score=24.78 Aligned_cols=67 Identities=10% Similarity=0.129 Sum_probs=49.3
Q ss_pred HHHHHHHHHhhccccCCceEEEEEc-CCCCHHHHHHHhccCcEEEeechhhhhhhhc--cCCCcEEEEEeeCcccc
Q 017449 209 EPAIIGIFEKECAKIDGCRMTVAYS-NNLTFCEQVKLMSMTDILVSPHGAQLTNIFL--MDRNSSVMEFFPKGWLK 281 (371)
Q Consensus 209 e~ev~~~l~~~~~~~~g~~~~vv~~-~~~s~~eQv~l~~~advlig~HGAgLtN~lF--m~pgs~viEi~P~~~~~ 281 (371)
.+++++.+++. +++..... ..+|-.|-++...++|++|...+..++.-++ +|+.-.+|--+.-|+..
T Consensus 11 ~~~~~~~l~~~------~~v~~~~~~~~~s~~el~~~~~~~d~ii~~~~~~i~~~~l~~~~~~LK~I~~~gvG~d~ 80 (129)
T d1gdha2 11 PEAAMARARES------YDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDH 80 (129)
T ss_dssp CHHHHHHHHTT------SEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSCCTT
T ss_pred CHHHHHHHHcC------CcEEEeCCCCCCCHHHHHHHhcCCCEEEEcCCchhhhHHHhhhhhcceeeeecccCCcc
Confidence 45677888763 35443322 4578888899999999999888888999998 56677788777777653
No 12
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.10 E-value=23 Score=28.09 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=35.5
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCH--------------HHHHHHhccCcEEE
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTF--------------CEQVKLMSMTDILV 252 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~--------------~eQv~l~~~advli 252 (371)
||++|.=+ .|.=.+-..+++.+.+... .|.+++++++.++++ .+-.+.+..||.+|
T Consensus 2 KIl~i~GS-~r~~s~s~~l~~~~~~~~~--~~~ev~~idl~dlP~~~~d~~~~~~~~~~~~~~~~i~~aD~ii 71 (174)
T d1rtta_ 2 KVLGISGS-LRSGSYNSAALQEAIGLVP--PGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALL 71 (174)
T ss_dssp EEEEEESC-CSTTCHHHHHHHHHHTTCC--TTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEE
T ss_pred EEEEEECC-CCCCCHHHHHHHHHHHhcC--CCCEEEEEecccCCCccccccccCCCHHHHHHHHHhhcCCeEE
Confidence 56777632 3443445666677766543 478899988766542 22356788899887
No 13
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=28.80 E-value=5.1 Score=33.39 Aligned_cols=52 Identities=17% Similarity=0.280 Sum_probs=31.3
Q ss_pred cccCHHHHHHHHHhhccccCCceEEEEEcCCCCHH-----------HHHHHhccCcEEEeechhh
Q 017449 205 SFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFC-----------EQVKLMSMTDILVSPHGAQ 258 (371)
Q Consensus 205 ~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~-----------eQv~l~~~advlig~HGAg 258 (371)
.++||++++++|++. +..|+.+.|.+.|-++.. ..-.+...-.|+++||=||
T Consensus 136 ~vvde~aL~~aL~~g--~i~ga~lDV~~~EP~~~~~~~~~~~~~~p~~~~L~~~~nviiTPHiag 198 (199)
T d1dxya1 136 NLIDTQAMLSNLKSG--KLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAY 198 (199)
T ss_dssp TSBCHHHHHHHHHTT--SEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTT
T ss_pred hhhhhHHHHHHHhcC--CcceEeccccCCCCcchhhccccccccChhhHHHhcCCCEEECCcccc
Confidence 589999999999873 222333444332222111 1123555667999999876
No 14
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=28.30 E-value=17 Score=29.58 Aligned_cols=51 Identities=12% Similarity=0.234 Sum_probs=32.8
Q ss_pred cccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhh
Q 017449 205 SFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQ 258 (371)
Q Consensus 205 ~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAg 258 (371)
.++|+++++++|++. +..++...|...+ -++..--.+...-.|+++||=||
T Consensus 131 ~ivd~~aL~~aL~~~--~i~~aalDV~~~e-~p~~~~~~l~~~~nvi~TPHiaG 181 (181)
T d1qp8a1 131 EVLDRDGVLRILKER--PQFIFASDVWWGR-NDFAKDAEFFSLPNVVATPWVAG 181 (181)
T ss_dssp GGBCHHHHHHHHHHC--TTCEEEESCCTTT-TCCGGGHHHHTSTTEEECCSCSS
T ss_pred ccccchhhhhhcccC--cEEEEEEecCCCC-CCCCCCChHHcCCCEEeccccCc
Confidence 599999999999983 2233444443222 22222234677788999999776
No 15
>d2a5la1 c.23.5.8 (A:3-198) Trp repressor binding protein WrbA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.85 E-value=12 Score=29.81 Aligned_cols=55 Identities=13% Similarity=0.079 Sum_probs=34.2
Q ss_pred CeeEEEEEEcCC-CCcccCHHHHHHHHHhhccccCCceEEEEEcCCCCH---------------HHHHHHhccCcEEE
Q 017449 191 KAVGMTLLMRTG-PRSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTF---------------CEQVKLMSMTDILV 252 (371)
Q Consensus 191 ~~~rv~~i~R~~-~R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~---------------~eQv~l~~~advli 252 (371)
|++-|+|.|+.| ++.+. +++.+.+++ .|.+++++.+.+++. .+..+.+.++|.||
T Consensus 2 ~Kvliiy~S~~GnT~~la--~~i~~g~~~-----~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~ii 72 (196)
T d2a5la1 2 PYILVLYYSRHGATAEMA--RQIARGVEQ-----GGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLA 72 (196)
T ss_dssp CEEEEEECCSSSHHHHHH--HHHHHHHHH-----TTCEEEEEBCCCEEC-------------CCBCCHHHHHTCSEEE
T ss_pred CeEEEEEeCCCcHHHHHH--HHHHHHHhh-----cCCEEEEEeccccchHHHHhccccccccccccchhhhhhcCEEE
Confidence 456677778776 34443 455566655 678898888754421 12245667888776
No 16
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=25.21 E-value=16 Score=30.25 Aligned_cols=51 Identities=24% Similarity=0.322 Sum_probs=33.7
Q ss_pred cccCHHHHHHHHHhhccccCCceEEEEEcCC-----------CCHHHHHHHhccCcEEEeechh
Q 017449 205 SFTNEPAIIGIFEKECAKIDGCRMTVAYSNN-----------LTFCEQVKLMSMTDILVSPHGA 257 (371)
Q Consensus 205 ~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~-----------~s~~eQv~l~~~advlig~HGA 257 (371)
.++||++++++|++. +..++.+.|.+.|. .+...--.+...-.|+++||=|
T Consensus 135 ~ivde~aL~~aL~~~--~i~~a~lDV~~~Ep~~~~~~~~~~~~p~~~~~~L~~~~nviiTPHiA 196 (197)
T d1j4aa1 135 PLVDTDAVIRGLDSG--KIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTA 196 (197)
T ss_dssp GGBCHHHHHHHHHHT--SEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCT
T ss_pred hhhhhHHHHHHHhcc--cchheeeeccccCCcccccccccccCCccchhhhhcCCCEEeCcccC
Confidence 589999999999973 22344455544331 1334444677778899999954
No 17
>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.99 E-value=57 Score=25.76 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=20.3
Q ss_pred EEEEEEcCCCCcccCHHHHHHHHHhhcc-----ccCCceEEEEEc
Q 017449 194 GMTLLMRTGPRSFTNEPAIIGIFEKECA-----KIDGCRMTVAYS 233 (371)
Q Consensus 194 rv~~i~R~~~R~i~Ne~ev~~~l~~~~~-----~~~g~~~~vv~~ 233 (371)
||++|.=. .|+=.|-..+.+.+.+.+. ...|.+++++++
T Consensus 2 KIlvI~GS-~R~~s~~~~la~~~~~~l~~~~~~~~~g~~v~~idL 45 (185)
T d1t0ia_ 2 KVGIIMGS-VRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDL 45 (185)
T ss_dssp EEEEEECC-CCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECH
T ss_pred EEEEEeCC-CCCCChHHHHHHHHHHHHHHhhhhcCCCcEEEEEec
Confidence 56777622 3444444444444333221 124788988875
No 18
>d1jwqa_ c.56.5.6 (A:) N-acetylmuramoyl-L-alanine amidase CwlV {Paenibacillus polymyxa [TaxId: 1406]}
Probab=23.22 E-value=51 Score=25.92 Aligned_cols=49 Identities=16% Similarity=0.120 Sum_probs=29.2
Q ss_pred HHHHHhhccccCCceEEEEEc--CCCCHHHHHHHhc--cCcEEEeechhhhhh
Q 017449 213 IGIFEKECAKIDGCRMTVAYS--NNLTFCEQVKLMS--MTDILVSPHGAQLTN 261 (371)
Q Consensus 213 ~~~l~~~~~~~~g~~~~vv~~--~~~s~~eQv~l~~--~advlig~HGAgLtN 261 (371)
...|++.+.+..++.+....- ..+++.+.+...+ ++|++|+.|=.+..+
T Consensus 34 a~~l~~~L~~~~~~~v~~tr~~D~~~~l~~R~~~an~~~ad~~iSiH~Na~~~ 86 (179)
T d1jwqa_ 34 ALKVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGS 86 (179)
T ss_dssp HHHHHHHHHTCTTEEEEESCSSSCCCCHHHHHHHHHHTTCSEEEEEEEECCSS
T ss_pred HHHHHHHHHhhcCceeeeccCCCccccHHHHHHHhhccCCCEEEEeccCCCCC
Confidence 344444443333444443332 3468888777664 699999999766544
No 19
>d1d4aa_ c.23.5.3 (A:) NAD(P)H:quinone reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.67 E-value=69 Score=27.29 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=11.3
Q ss_pred HHHHHHHhccCcEEEe
Q 017449 238 FCEQVKLMSMTDILVS 253 (371)
Q Consensus 238 ~~eQv~l~~~advlig 253 (371)
+.+..+.+..||+||=
T Consensus 84 i~~~~~~l~~AD~IV~ 99 (273)
T d1d4aa_ 84 IVAEQKKLEAADLVIF 99 (273)
T ss_dssp HHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHhCCEEEE
Confidence 3455677888998774
No 20
>d1y9ua_ c.94.1.1 (A:) Ferric-binding protein FbpA {Bordetella pertussis [TaxId: 520]}
Probab=22.21 E-value=70 Score=25.94 Aligned_cols=45 Identities=18% Similarity=0.417 Sum_probs=30.3
Q ss_pred HHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhc---cCcEEEeechhhh
Q 017449 210 PAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMS---MTDILVSPHGAQL 259 (371)
Q Consensus 210 ~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~---~advlig~HGAgL 259 (371)
++++++++++ .|++|+++...+ .+.++++.-. .+||+++.-...+
T Consensus 15 ~~li~~Fek~----tGIkV~~~~~~~-~~~~kl~ae~~~~~~DVv~~~~~~~~ 62 (318)
T d1y9ua_ 15 QPLLDAFAKD----SGIKVNTVFVKD-GLLERVRAEGDKSPADVLMTVDIGNL 62 (318)
T ss_dssp HHHHHHHHHH----HCCEEEEEECSS-CHHHHHHHHGGGCCCCEEEEESHHHH
T ss_pred HHHHHHHHHh----hCCEEEEEECCH-HHHHHHHhcCCCCCCCEEEeCCHHHH
Confidence 5677888775 688998876543 4666666543 3999998654433
No 21
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=22.16 E-value=13 Score=30.27 Aligned_cols=53 Identities=17% Similarity=0.334 Sum_probs=30.0
Q ss_pred CcccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHH--HHhccCcEEEeechhh
Q 017449 204 RSFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQV--KLMSMTDILVSPHGAQ 258 (371)
Q Consensus 204 R~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv--~l~~~advlig~HGAg 258 (371)
-.++|+++++++|++. +..++.+.|.+.|-....+-+ .+...-.|+++||=||
T Consensus 134 G~lvde~aL~~aL~~~--~~~~a~lDV~~~EP~~~~~~~~~~l~~~~nv~~TPHiaG 188 (188)
T d1sc6a1 134 GTVVDIPALADALASK--HLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGG 188 (188)
T ss_dssp SSSBCHHHHHHHHHTT--SEEEEEEEC---------CTTTGGGTTCTTEEEECCCSC
T ss_pred HHhhhhHHHHHHHHcC--CceEEEEecCCCCCCCcCCccchhHhcCCCEEEcCCcCc
Confidence 3699999999999873 234455555554432111101 2555668999999665
No 22
>d1xova2 c.56.5.6 (A:1-180) Endolysin Ply, catalytic domain {Bacteriophage Psa [TaxId: 171618]}
Probab=21.30 E-value=82 Score=24.98 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=22.5
Q ss_pred CCceEEEEEcC-----CCCHHHHHHHh--ccCcEEEeechh
Q 017449 224 DGCRMTVAYSN-----NLTFCEQVKLM--SMTDILVSPHGA 257 (371)
Q Consensus 224 ~g~~~~vv~~~-----~~s~~eQv~l~--~~advlig~HGA 257 (371)
.|.+|.++.-. ..++.+.+... .++|++|+.|--
T Consensus 41 ~G~~V~~~~~~~~~~~~~~L~~R~~~an~~~aDl~iSiH~N 81 (180)
T d1xova2 41 EGHNVKTFIDRTSTTQSANLNKIVNWHNANPADVHISVHLN 81 (180)
T ss_dssp TTCEEEEEEESSCCSHHHHHHHHHHHHHHSCCSEEEEEEEE
T ss_pred CCCeEEEEEccCCCccccCHHHHHHHHHhcCCCEEEEeccc
Confidence 56666665432 13466666655 789999999953
No 23
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.25 E-value=11 Score=30.74 Aligned_cols=46 Identities=17% Similarity=0.388 Sum_probs=30.5
Q ss_pred cccCHHHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeec
Q 017449 205 SFTNEPAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPH 255 (371)
Q Consensus 205 ~i~Ne~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~H 255 (371)
.++||++++++|++. +..++.+.|.+.|-++ + -.+...-.|+++||
T Consensus 137 ~iVde~aL~~aL~~~--~i~~a~lDV~~~EP~~--~-~~l~~~~nviiTPH 182 (184)
T d1ygya1 137 GLVDEAALADAITGG--HVRAAGLDVFATEPCT--D-SPLFELAQVVVTPH 182 (184)
T ss_dssp TSBCHHHHHHHHHTS--SEEEEEESSCSSSSCS--C-CGGGGCTTEEECSS
T ss_pred hhhhhHHHHHHHhcC--cEeEEEEeCCCCCCCC--C-chHhcCCCEEECCC
Confidence 699999999999973 2234445554444333 1 13566667999998
No 24
>d1sqsa_ c.23.5.5 (A:) Hypothetical protein SP1951 {(Streptococcus pneumoniae) [TaxId: 1313]}
Probab=21.22 E-value=82 Score=25.76 Aligned_cols=15 Identities=20% Similarity=0.058 Sum_probs=11.1
Q ss_pred HHHHHHHhccCcEEE
Q 017449 238 FCEQVKLMSMTDILV 252 (371)
Q Consensus 238 ~~eQv~l~~~advli 252 (371)
+.+..+.+.+||.||
T Consensus 70 ~~~i~~~i~~AD~iI 84 (232)
T d1sqsa_ 70 GGVIKKELLESDIII 84 (232)
T ss_dssp HHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHhCCEEE
Confidence 455667788899887
No 25
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.24 E-value=51 Score=26.43 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=43.6
Q ss_pred HHHHHHHHhhccccCCceEEEEEcCCCCHHHHHHHhccCcEEEeechhhhhhhhccCCC-cEEEEEeeCcccc
Q 017449 210 PAIIGIFEKECAKIDGCRMTVAYSNNLTFCEQVKLMSMTDILVSPHGAQLTNIFLMDRN-SSVMEFFPKGWLK 281 (371)
Q Consensus 210 ~ev~~~l~~~~~~~~g~~~~vv~~~~~s~~eQv~l~~~advlig~HGAgLtN~lFm~pg-s~viEi~P~~~~~ 281 (371)
.++.+.+++.+. .-.+-..+...++..+....+..-+=++|+| .|.||. ..+|||+|.....
T Consensus 105 ~~v~~~l~~~~~---~~~ilasnTS~l~i~~la~~~~~p~r~ig~H-------ffnP~~~~~lVEIv~g~~T~ 167 (192)
T d1f0ya2 105 NELFKRLDKFAA---EHTIFASNTSSLQITSIANATTRQDRFAGLH-------FFNPVPVMKLVEVIKTPMTS 167 (192)
T ss_dssp HHHHHHHTTTSC---TTCEEEECCSSSCHHHHHTTSSCGGGEEEEE-------ECSSTTTCCEEEEECCTTCC
T ss_pred HHHHHHHhhhcc---cCceeeccCcccccchhhhhccCHhHEEeec-------cccccCcccEEEEcCCCCCC
Confidence 455666655442 2223333456789999999999999999999 566764 7899999976554
Done!