BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017454
         (371 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147787408|emb|CAN77816.1| hypothetical protein VITISV_020659 [Vitis vinifera]
          Length = 430

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/347 (95%), Positives = 339/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHLF  EL +YNLGEDCPVFENLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK+HARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD FFPGTGDVKE GEREGKFYAINVPLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDKFFPGTGDVKETGEREGKFYAINVPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KVVETY PG IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
Sbjct: 241 IIAKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIPENEYIKYFAPE SL+IPNGHI
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPEYSLKIPNGHI 347


>gi|225453264|ref|XP_002266492.1| PREDICTED: histone deacetylase 9 [Vitis vinifera]
 gi|297734674|emb|CBI16725.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/347 (95%), Positives = 339/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHLF  EL +YNLGEDCPVFENLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK+HARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD FFPGTGDVKE GEREGKFYAINVPLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDKFFPGTGDVKETGEREGKFYAINVPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KVVETY PG IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
Sbjct: 241 IIAKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIPENEYIKYFAPE SL+IPNGHI
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPEYSLKIPNGHI 347


>gi|359479384|ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis vinifera]
          Length = 458

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/347 (95%), Positives = 338/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVEL
Sbjct: 29  MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL 88

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHLF  EL KYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
Sbjct: 89  AQFHSADYVEFLHRITPDTQHLFLNELAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 148

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK+HARVLYIDIDVHHGDGVE
Sbjct: 149 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE 208

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD+FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT
Sbjct: 209 EAFYFTDRVMTVSFHKYGDMFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 268

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KVVE Y PG IVLQCGADSLAGDRLGCFNLSIDGHAECVR VKKFNLPLLVTGGGGY
Sbjct: 269 IIAKVVEIYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGY 328

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIPENEYIKYF PE SL+IPNGHI
Sbjct: 329 TKENVARCWTVETGVLLDTELPNEIPENEYIKYFGPEHSLKIPNGHI 375


>gi|297734830|emb|CBI17064.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/347 (95%), Positives = 338/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHLF  EL KYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLFLNELAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK+HARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD+FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDMFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KVVE Y PG IVLQCGADSLAGDRLGCFNLSIDGHAECVR VKKFNLPLLVTGGGGY
Sbjct: 241 IIAKVVEIYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIPENEYIKYF PE SL+IPNGHI
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPENEYIKYFGPEHSLKIPNGHI 347


>gi|356539296|ref|XP_003538135.1| PREDICTED: histone deacetylase 9-like [Glycine max]
          Length = 429

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/347 (94%), Positives = 338/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SKDKI+YFYDGDVGSVYFG  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
Sbjct: 1   MPSKDKIAYFYDGDVGSVYFGAKHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFL+RITPDTQHLF +ELTKYNLGEDCPVF+NLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLNRITPDTQHLFLKELTKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GDLFFPGTGD KEIGEREGKFYAINVPLKDGIDD+SFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDLFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKV+ETY PGAIVLQCGADSLAGDRLGCFNLSIDGHAECV FVK+FNLPLLVTGGGGY
Sbjct: 241 IISKVLETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVSFVKRFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIPEN+YIKYFAPE SL+IPNG I
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPENDYIKYFAPEFSLKIPNGQI 347


>gi|356542722|ref|XP_003539814.1| PREDICTED: histone deacetylase 9-like [Glycine max]
          Length = 429

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/347 (93%), Positives = 337/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+I+YFYDGDVGSVYFG  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRIAYFYDGDVGSVYFGAKHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFL+RITPDTQHLF  ELTKYNLGEDCPVF+NLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLNRITPDTQHLFLNELTKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD FFPGTGD KEIGEREGKFYAINVPLKDGIDD+SFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDSFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKVVETY PGAIVLQCGADSLAGDRLGCFNLSIDGHAECV FVK+FNLPLLVTGGGGY
Sbjct: 241 IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVSFVKRFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIP+N+YIKYFAPE SL++PNG I
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPQNDYIKYFAPEFSLKVPNGPI 347


>gi|449456108|ref|XP_004145792.1| PREDICTED: histone deacetylase 9-like [Cucumis sativus]
          Length = 430

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/347 (93%), Positives = 337/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRI PDTQHLF  EL+KYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLHRINPDTQHLFANELSKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH+RVLYIDIDVHHGDGVE
Sbjct: 121 NHQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHSRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDD SF RLF+T
Sbjct: 181 EAFYFTDRVMTVSFHKYGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDGSFNRLFRT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKVVE Y PG IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
Sbjct: 241 IISKVVEMYRPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIP+NEYIKYF+P+  LRIPNGH+
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFSPDHLLRIPNGHM 347


>gi|357471905|ref|XP_003606237.1| Histone deacetylase [Medicago truncatula]
 gi|355507292|gb|AES88434.1| Histone deacetylase [Medicago truncatula]
          Length = 430

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/347 (93%), Positives = 337/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME+YRPHKAYPVEL
Sbjct: 1   MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEVYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHLF  EL KYNLGEDCPVF+NLFEFCQ+YAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLFSDELAKYNLGEDCPVFDNLFEFCQMYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN+LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct: 121 NNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVS HK+GDLFFPGTGD KEIGEREGKFYAINVPLKDGIDD+SFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSSHKYGDLFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKVVETY PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFN+PLLVTGGGGY
Sbjct: 241 IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNVPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIPEN+YIKYF P+ SL+IPNG I
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPENDYIKYFGPDFSLKIPNGFI 347


>gi|255639849|gb|ACU20217.1| unknown [Glycine max]
          Length = 429

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/347 (93%), Positives = 337/347 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+I+YFYDGDVGSVYFG  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRIAYFYDGDVGSVYFGAKHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFL+RITPDTQHLF  ELTKYNLGEDCPVF+NLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLNRITPDTQHLFLNELTKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD FFPGTGD KEIGEREGKFYAINVPLKDGIDD+SFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDSFFPGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKVVETY PGAIVLQCGADSLAGDRLGCFNLSIDGHAECV FVK+FNLPLLVTGGGGY
Sbjct: 241 IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVSFVKRFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIP+N+YIKYFAPE SL++PNG I
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPQNDYIKYFAPEFSLKVPNGPI 347


>gi|224061587|ref|XP_002300554.1| histone deacetylase [Populus trichocarpa]
 gi|222847812|gb|EEE85359.1| histone deacetylase [Populus trichocarpa]
          Length = 429

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/345 (93%), Positives = 335/345 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+I+YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHS DYVEFLHRITPDTQHLF  EL +YNLGEDCPVFENLFEFCQIYAGGTIDAA RL
Sbjct: 61  AQFHSEDYVEFLHRITPDTQHLFAGELARYNLGEDCPVFENLFEFCQIYAGGTIDAAHRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKC ASGFCYINDLVLGILELLK+HARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD+FFPGTGDVKE+GEREGKFYAINVPLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDMFFPGTGDVKELGEREGKFYAINVPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKVVETY PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
Sbjct: 241 IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNG 345
           TKENVARCWTVETG+LLDTELPNEIPENEYIKYFAP+ SL+ P G
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPDYSLKSPGG 345


>gi|255576367|ref|XP_002529076.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
 gi|223531488|gb|EEF33320.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
          Length = 429

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/347 (93%), Positives = 335/347 (96%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVG+VYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHS DYVEFLHRI PDTQHLF  EL +YNLGEDCPVF+NLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSTDYVEFLHRIVPDTQHLFANELARYNLGEDCPVFQNLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCDIAINWAGGLHHAKKC ASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD+FFPGTGDVK+IGEREGKFYAINVPLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDMFFPGTGDVKDIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKVVETY PG IVLQCGADSLA DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
Sbjct: 241 IISKVVETYQPGVIVLQCGADSLARDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETG+LLDTELPNEIP+N+YI+YFAPE SL+IP G I
Sbjct: 301 TKENVARCWTVETGVLLDTELPNEIPDNDYIEYFAPEYSLKIPGGQI 347


>gi|162463005|ref|NP_001105077.1| histone deacetylase [Zea mays]
 gi|17017402|gb|AAL33655.1|AF440228_1 histone deacetylase [Zea mays]
 gi|194698156|gb|ACF83162.1| unknown [Zea mays]
 gi|195638218|gb|ACG38577.1| histone deacetylase [Zea mays]
          Length = 430

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/344 (89%), Positives = 335/344 (97%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  KD+ISYFYDGDVG+VYFGPNHPMKPHRLCMTHHLVLSY LH+KMEIYRPHKAYP+EL
Sbjct: 1   MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHQKMEIYRPHKAYPIEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPD+QHL+  ELT+YNLGEDCPVF+NLFEFCQIYAGGT+DAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDSQHLYASELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+++CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NHKICDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GDLFFPGTGD+K+IGEREGK+YAIN+PLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KVVETY PGAIVLQCGADSLA DRLGCFNLSI+GHAECV+FVKKFN+PLLVTGGGGY
Sbjct: 241 IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
           TKENVARCW VETG+LLDTELPNEIP+NEYI+YFAP+ +L++PN
Sbjct: 301 TKENVARCWAVETGVLLDTELPNEIPKNEYIEYFAPDYTLKVPN 344


>gi|30692236|ref|NP_190054.2| histone deacetylase 9 [Arabidopsis thaliana]
 gi|75244587|sp|Q8H0W2.1|HDA9_ARATH RecName: Full=Histone deacetylase 9
 gi|25082914|gb|AAN72014.1| putative protein [Arabidopsis thaliana]
 gi|30387509|gb|AAP31920.1| At3g44680 [Arabidopsis thaliana]
 gi|332644409|gb|AEE77930.1| histone deacetylase 9 [Arabidopsis thaliana]
          Length = 426

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/347 (89%), Positives = 330/347 (95%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+
Sbjct: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHS DYVEFL RI P+ Q+LF  E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRL
Sbjct: 61  AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN+LCDIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct: 121 NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHKFGD FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+T
Sbjct: 181 EAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKVVE Y PGAIVLQCGADSLA DRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGY
Sbjct: 241 IISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           TKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHI
Sbjct: 301 TKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHI 347


>gi|242072930|ref|XP_002446401.1| hypothetical protein SORBIDRAFT_06g015420 [Sorghum bicolor]
 gi|241937584|gb|EES10729.1| hypothetical protein SORBIDRAFT_06g015420 [Sorghum bicolor]
          Length = 430

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/344 (88%), Positives = 332/344 (96%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  KD+ISYFYDGDVG+VYFGPNHPMKPHRLCMTHHLVLSY LHKKMEIYRPHKAYP+EL
Sbjct: 1   MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHKKMEIYRPHKAYPIEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHL+  ELT+YNLGEDCPVF+NLFEFCQIY GGT+DAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLYASELTRYNLGEDCPVFDNLFEFCQIYTGGTLDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++ CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GDLFFPGTGD+K+IGEREGK+YAIN+PLKDGIDD+SFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDSSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KV+ETY PGAIVLQCGADSLA DRLGCFNLSI+GHAECV+FVKKFN+PLLVTGGGGY
Sbjct: 241 IIAKVIETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
           TKENVARCW VETG+LLDTELPNEIP NEYI+YFAP+ +L++PN
Sbjct: 301 TKENVARCWAVETGVLLDTELPNEIPNNEYIEYFAPDYTLKVPN 344


>gi|188482311|gb|ACD50313.1| histone deacetylase RPD3/HDA1 class I isoform 1 [Hordeum vulgare]
          Length = 430

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/344 (88%), Positives = 332/344 (96%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  KD+ISYFYDGDVG+VYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYP EL
Sbjct: 1   MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPTEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHL+  ELT+YNLGEDCPVF++LFEFCQIYAGGT+DAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLYASELTRYNLGEDCPVFDDLFEFCQIYAGGTLDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++ CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD+FFPGTGD+K+IG+REGK+YAIN+PLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDMFFPGTGDIKDIGDREGKYYAINIPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KVVETY PGAIVLQCGADSLA DRLGCFNLSI+GHAECV+FVKKF +PLLVTGGGGY
Sbjct: 241 IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFKIPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
           TKENVARCW VETG+LLDTELPNEIP+NEYIKYF P+ +L++PN
Sbjct: 301 TKENVARCWAVETGVLLDTELPNEIPDNEYIKYFGPDYTLKVPN 344


>gi|116309428|emb|CAH66503.1| H0321H01.12 [Oryza sativa Indica Group]
 gi|218194812|gb|EEC77239.1| hypothetical protein OsI_15792 [Oryza sativa Indica Group]
 gi|222628819|gb|EEE60951.1| hypothetical protein OsJ_14708 [Oryza sativa Japonica Group]
          Length = 430

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/344 (88%), Positives = 330/344 (95%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  KD+I+YFYDGDVG+VYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYP EL
Sbjct: 1   MLEKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHL+  EL +YNLGEDCPVF+NLFEFCQIYAGGT+DAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLYENELRRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++ CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD FFPGTGD+K+IGEREGK+YAIN+PLKDGIDD+ FTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDFFFPGTGDIKDIGEREGKYYAINIPLKDGIDDSGFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I+KVVETY PGAIVLQCGADSLA DRLGCFNLSI+GHAECV+FVKKFN+PLLVTGGGGY
Sbjct: 241 VIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
           TKENVARCW VETG+LLDTELPNEIP+NEYIKYFAP+ +L++ N
Sbjct: 301 TKENVARCWAVETGVLLDTELPNEIPDNEYIKYFAPDYTLKVSN 344


>gi|357163294|ref|XP_003579685.1| PREDICTED: histone deacetylase 9-like [Brachypodium distachyon]
          Length = 430

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/344 (88%), Positives = 331/344 (96%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  KD+ISYFYDGDVG+VYFGPNHPMKPHRLCMTHHLVLSY LHKKMEIYRPHKAYP EL
Sbjct: 1   MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHKKMEIYRPHKAYPTEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRITPDTQHL+  ELT+YNLGEDCPVF++LFEFCQIYAGGT+DAARRL
Sbjct: 61  AQFHSADYVEFLHRITPDTQHLYASELTRYNLGEDCPVFDDLFEFCQIYAGGTLDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++ CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH+RVLYIDIDVHHGDGVE
Sbjct: 121 NHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHSRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD+FFPGTGD+K+IG+REGK+YAIN+PLKDGIDDTSFTRLFKT
Sbjct: 181 EAFYFTDRVMTVSFHKYGDMFFPGTGDIKDIGDREGKYYAINIPLKDGIDDTSFTRLFKT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II+KVVETY PGAIVLQCGADSLA DRLGCFNLSI+GHAECV+FVKKF +PLLVTGGGGY
Sbjct: 241 IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFKIPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
           TKENVARCW VETG+LLDT+LPNEIP+NEYIKYF P+ +L++PN
Sbjct: 301 TKENVARCWAVETGVLLDTDLPNEIPDNEYIKYFGPDYTLKVPN 344


>gi|297818938|ref|XP_002877352.1| hypothetical protein ARALYDRAFT_347545 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323190|gb|EFH53611.1| hypothetical protein ARALYDRAFT_347545 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1443

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 299/351 (85%), Positives = 318/351 (90%), Gaps = 16/351 (4%)

Query: 13   GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
            GDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+AQFHS DYVEFL
Sbjct: 1014 GDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFL 1073

Query: 73   HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             RI P+ Q+LF  E+ +YNLGEDCPVFE+LFEFCQIYAGGTIDAARRLNN+LCDIAINWA
Sbjct: 1074 QRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQIYAGGTIDAARRLNNKLCDIAINWA 1133

Query: 133  GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
            GGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVEEAFYFTDRVMTV
Sbjct: 1134 GGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTV 1193

Query: 193  SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
            SFHKFGD FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+TIISKVVE Y PG
Sbjct: 1194 SFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPG 1253

Query: 253  AIVLQCGADSLAGDRLGCFNLSID----------------GHAECVRFVKKFNLPLLVTG 296
            AIVLQCGADSLA DRLGCFNLSID                GHAECV+FVKKFNLPLLVTG
Sbjct: 1254 AIVLQCGADSLARDRLGCFNLSIDVSVTQILKRLSLMHFPGHAECVKFVKKFNLPLLVTG 1313

Query: 297  GGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            GGGYTKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHI
Sbjct: 1314 GGGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHI 1364


>gi|414587383|tpg|DAA37954.1| TPA: histone deacetylase [Zea mays]
          Length = 427

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/332 (89%), Positives = 325/332 (97%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GDVG+VYFGPNHPMKPHRLCMTHHLVLSY LH+KMEIYRPHKAYP+ELAQFHSADYVEFL
Sbjct: 10  GDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHQKMEIYRPHKAYPIELAQFHSADYVEFL 69

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
           HRITPD+QHL+  ELT+YNLGEDCPVF+NLFEFCQIYAGGT+DAARRLN+++CDIAINWA
Sbjct: 70  HRITPDSQHLYASELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHKICDIAINWA 129

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV
Sbjct: 130 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 189

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+GDLFFPGTGD+K+IGEREGK+YAIN+PLKDGIDDTSFTRLFKTII+KVVETY PG
Sbjct: 190 SFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDTSFTRLFKTIIAKVVETYLPG 249

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           AIVLQCGADSLA DRLGCFNLSI+GHAECV+FVKKFN+PLLVTGGGGYTKENVARCW VE
Sbjct: 250 AIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVE 309

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
           TG+LLDTELPNEIP+NEYI+YFAP+ +L++PN
Sbjct: 310 TGVLLDTELPNEIPKNEYIEYFAPDYTLKVPN 341


>gi|414587382|tpg|DAA37953.1| TPA: histone deacetylase, mRNA [Zea mays]
          Length = 432

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/332 (89%), Positives = 325/332 (97%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GDVG+VYFGPNHPMKPHRLCMTHHLVLSY LH+KMEIYRPHKAYP+ELAQFHSADYVEFL
Sbjct: 15  GDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHQKMEIYRPHKAYPIELAQFHSADYVEFL 74

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
           HRITPD+QHL+  ELT+YNLGEDCPVF+NLFEFCQIYAGGT+DAARRLN+++CDIAINWA
Sbjct: 75  HRITPDSQHLYASELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHKICDIAINWA 134

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV
Sbjct: 135 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 194

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+GDLFFPGTGD+K+IGEREGK+YAIN+PLKDGIDDTSFTRLFKTII+KVVETY PG
Sbjct: 195 SFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDTSFTRLFKTIIAKVVETYLPG 254

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           AIVLQCGADSLA DRLGCFNLSI+GHAECV+FVKKFN+PLLVTGGGGYTKENVARCW VE
Sbjct: 255 AIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVE 314

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
           TG+LLDTELPNEIP+NEYI+YFAP+ +L++PN
Sbjct: 315 TGVLLDTELPNEIPKNEYIEYFAPDYTLKVPN 346


>gi|45935150|gb|AAS79608.1| putative histone deacetylase [Ipomoea trifida]
          Length = 438

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 309/389 (79%), Positives = 331/389 (85%), Gaps = 41/389 (10%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVG+VYFGPNHPMKPHRLCMTHHLVL+Y LH KMEIYRPHKAYP+EL
Sbjct: 1   MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLAYGLHNKMEIYRPHKAYPMEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFH+ADYVEFLHRITPDTQHLF  +L +YNLGEDCPVF+NLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHTADYVEFLHRITPDTQHLFGSDLKRYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NNQLCD+AINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH RVLYIDIDVHHGDGVE
Sbjct: 121 NNQLCDVAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHPRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFYFTDRVMTVSFHK+GD FFPGTGD+K+IGER+GKFYAINVP KDGIDD+SF RLF+T
Sbjct: 181 EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDIGERDGKFYAINVPFKDGIDDSSFIRLFRT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCF-------------------NLS------- 274
           IISKVVETY PGAIVLQCGADSLAGDRL  F                   NLS       
Sbjct: 241 IISKVVETYIPGAIVLQCGADSLAGDRLVLFGHHSTFCKDISVVYLFPSTNLSCNFLGDF 300

Query: 275 ---------IDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN-- 323
                    + GHAECVRFVKKFN+PLLVTGGGGYTKENVARCWT ETGILLD+ELPN  
Sbjct: 301 YMGMFYLMLLAGHAECVRFVKKFNIPLLVTGGGGYTKENVARCWTYETGILLDSELPNVF 360

Query: 324 ----EIPENEYIKYFAPECSLRIPNGHIV 348
               EIP+N+YIKYF P+ SL+IP GHIV
Sbjct: 361 FFPPEIPDNDYIKYFGPDYSLKIPGGHIV 389


>gi|168044396|ref|XP_001774667.1| class I RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens]
 gi|162673967|gb|EDQ60482.1| class I RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens]
          Length = 431

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 287/346 (82%), Positives = 321/346 (92%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  KD++SYFYDGDVGSVY+GPNHPMKPHRLCMT+ LVL+Y LH KMEIYRPHKAYPVEL
Sbjct: 1   MPVKDRVSYFYDGDVGSVYYGPNHPMKPHRLCMTNSLVLAYGLHNKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHS DYVEFL RITP++Q  +  EL +YN+GEDCPVF+NLFEFCQIYAGGTIDAA RL
Sbjct: 61  AQFHSVDYVEFLGRITPESQEKYAAELIRYNMGEDCPVFDNLFEFCQIYAGGTIDAAHRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+ LCDIAINWAGGLHHAKKCEASGFCY+NDLVLGILELLKYHARVLYIDID+HHGDGVE
Sbjct: 121 NHGLCDIAINWAGGLHHAKKCEASGFCYVNDLVLGILELLKYHARVLYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHKFGD FFPGTGDVK++GEREGK+YAINVPLKDGIDD +F R+F+ 
Sbjct: 181 EAFYLTDRVMTVSFHKFGDYFFPGTGDVKDVGEREGKYYAINVPLKDGIDDANFIRMFRV 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I KVVE Y PGAIVLQCGADSLAGDRLGCFNLSIDGH+ECV+FVKKFN+PLLVTGGGGY
Sbjct: 241 VIQKVVEVYQPGAIVLQCGADSLAGDRLGCFNLSIDGHSECVKFVKKFNIPLLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGH 346
           TKENVARCWTVETG+L+DTELPNEIP+N+Y+KYF P+C+L+  +G+
Sbjct: 301 TKENVARCWTVETGVLVDTELPNEIPDNDYLKYFKPDCTLKTTSGN 346


>gi|6967116|emb|CAB72470.1| putative protein [Arabidopsis thaliana]
          Length = 419

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 294/342 (85%), Positives = 317/342 (92%), Gaps = 4/342 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            + ++  GDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+AQFHS
Sbjct: 3   NVFFWVAGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHS 62

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DYVEFL RI P+ Q+LF  E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRLNN+LC
Sbjct: 63  PDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKLC 122

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVEEAFYF
Sbjct: 123 DIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYF 182

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHKFGD FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+T    V
Sbjct: 183 TDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRT----V 238

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           VE Y PGAIVLQCGADSLA DRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGYTKENV
Sbjct: 239 VEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENV 298

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           ARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHI
Sbjct: 299 ARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHI 340


>gi|238013414|gb|ACR37742.1| unknown [Zea mays]
          Length = 405

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 286/319 (89%), Positives = 312/319 (97%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHRLCMTHHLVLSY LH+KMEIYRPHKAYP+ELAQFHSADYVEFLHRITPD+QHL+  
Sbjct: 1   MKPHRLCMTHHLVLSYGLHQKMEIYRPHKAYPIELAQFHSADYVEFLHRITPDSQHLYAS 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ELT+YNLGEDCPVF+NLFEFCQIYAGGT+DAARRLN+++CDIAINWAGGLHHAKKCEASG
Sbjct: 61  ELTRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHKICDIAINWAGGLHHAKKCEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK+GDLFFPGT
Sbjct: 121 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDLFFPGT 180

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+K+IGEREGK+YAIN+PLKDGIDDTSFTRLFKTII+KVVETY PGAIVLQCGADSLA 
Sbjct: 181 GDIKDIGEREGKYYAINIPLKDGIDDTSFTRLFKTIIAKVVETYLPGAIVLQCGADSLAR 240

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLSI+GHAECV+FVKKFN+PLLVTGGGGYTKENVARCW VETG+LLDTELPNEI
Sbjct: 241 DRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEI 300

Query: 326 PENEYIKYFAPECSLRIPN 344
           P+NEYI+YFAP+ +L++PN
Sbjct: 301 PKNEYIEYFAPDYTLKVPN 319


>gi|302765222|ref|XP_002966032.1| hypothetical protein SELMODRAFT_84957 [Selaginella moellendorffii]
 gi|300166846|gb|EFJ33452.1| hypothetical protein SELMODRAFT_84957 [Selaginella moellendorffii]
          Length = 432

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 282/344 (81%), Positives = 312/344 (90%), Gaps = 1/344 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +KD++SYFYDGDVGSVY+GPNHPMKPHRLCMTH LVL+Y LH KMEIYRP KAYP ELAQ
Sbjct: 4   AKDRVSYFYDGDVGSVYYGPNHPMKPHRLCMTHSLVLAYGLHNKMEIYRPRKAYPAELAQ 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTI-DAARRLN 121
           FHS DY++FLHRITP+ Q  + +EL  YN+GEDCPVF+NLFEFCQIYAGGTI DAA RLN
Sbjct: 64  FHSTDYIDFLHRITPEMQDQYAKELLMYNMGEDCPVFDNLFEFCQIYAGGTIADAAHRLN 123

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           + LCDIAINWAGGLHHAKKCEASGFCY+NDLVLGILELLKY  RVLYIDID+HHGDGVEE
Sbjct: 124 HGLCDIAINWAGGLHHAKKCEASGFCYVNDLVLGILELLKYFPRVLYIDIDIHHGDGVEE 183

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTGDVK++GEREGK+YA+NVPLKDGIDD+SF RLF+ +
Sbjct: 184 AFYLTDRVMTVSFHKFGDYFFPGTGDVKDVGEREGKYYAVNVPLKDGIDDSSFIRLFRVV 243

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           ISKVVE Y PGA+VLQCGADSLAGDRLGCFNLSI GHAECV FVKK  +PLLVTGGGGYT
Sbjct: 244 ISKVVEFYQPGAVVLQCGADSLAGDRLGCFNLSIQGHAECVNFVKKLGIPLLVTGGGGYT 303

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNG 345
           KENVARCWTVETG+LLDTELPNEIP N+YIKYF P+ +L+  +G
Sbjct: 304 KENVARCWTVETGVLLDTELPNEIPSNDYIKYFKPDYTLKTNHG 347


>gi|302776612|ref|XP_002971460.1| hypothetical protein SELMODRAFT_172161 [Selaginella moellendorffii]
 gi|300160592|gb|EFJ27209.1| hypothetical protein SELMODRAFT_172161 [Selaginella moellendorffii]
          Length = 432

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 282/344 (81%), Positives = 312/344 (90%), Gaps = 1/344 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +KD++SYFYDGDVGSVY+GPNHPMKPHRLCMTH LVL+Y LH KMEIYRP KAYP ELAQ
Sbjct: 4   AKDRVSYFYDGDVGSVYYGPNHPMKPHRLCMTHSLVLAYGLHHKMEIYRPRKAYPAELAQ 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTI-DAARRLN 121
           FHS DY++FLHRITP+ Q  + +EL  YN+GEDCPVF+NLFEFCQIYAGGTI DAA RLN
Sbjct: 64  FHSTDYIDFLHRITPEMQDQYAKELLMYNMGEDCPVFDNLFEFCQIYAGGTIADAAHRLN 123

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           + LCDIAINWAGGLHHAKKCEASGFCY+NDLVLGILELLKY  RVLYIDID+HHGDGVEE
Sbjct: 124 HGLCDIAINWAGGLHHAKKCEASGFCYVNDLVLGILELLKYFPRVLYIDIDIHHGDGVEE 183

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTGDVK++GEREGK+YA+NVPLKDGIDD+SF RLF+ +
Sbjct: 184 AFYLTDRVMTVSFHKFGDYFFPGTGDVKDVGEREGKYYAVNVPLKDGIDDSSFIRLFRVV 243

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           ISKVVE Y PGA+VLQCGADSLAGDRLGCFNLSI GHAECV FVKK  +PLLVTGGGGYT
Sbjct: 244 ISKVVEFYQPGAVVLQCGADSLAGDRLGCFNLSIQGHAECVNFVKKLGIPLLVTGGGGYT 303

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNG 345
           KENVARCWTVETG+LLDTELPNEIP N+YIKYF P+ +L+  +G
Sbjct: 304 KENVARCWTVETGVLLDTELPNEIPSNDYIKYFKPDYTLKTNHG 347


>gi|147822590|emb|CAN75079.1| hypothetical protein VITISV_007579 [Vitis vinifera]
          Length = 393

 Score =  602 bits (1553), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 292/322 (90%), Positives = 299/322 (92%), Gaps = 12/322 (3%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF  
Sbjct: 1   MKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFLN 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           EL KYNLGE CPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG
Sbjct: 61  ELAKYNLGEXCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCYINDLVLGILELLK+HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK+GD+FFPGT
Sbjct: 121 FCYINDLVLGILELLKHHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDMFFPGT 180

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII+KVVE Y PG IVLQCGADSLAG
Sbjct: 181 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIAKVVEIYQPGVIVLQCGADSLAG 240

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLSIDG              LLVTGGGGYTKENVARCWTVETG+LLDTELPNEI
Sbjct: 241 DRLGCFNLSIDG------------ANLLVTGGGGYTKENVARCWTVETGVLLDTELPNEI 288

Query: 326 PENEYIKYFAPECSLRIPNGHI 347
           PENEYIKYF PE SL+IPNGHI
Sbjct: 289 PENEYIKYFGPEHSLKIPNGHI 310


>gi|384254271|gb|EIE27745.1| class I RPD3 type histone deacetylase protein [Coccomyxa
           subellipsoidea C-169]
          Length = 428

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 238/348 (68%), Positives = 298/348 (85%), Gaps = 1/348 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K K++YFYD + G +Y+G NHPMKPHRLCMTHHLVL+YDLHK++E+YRP  AYP+EL
Sbjct: 1   MERKKKVAYFYDSEFGEMYYGANHPMKPHRLCMTHHLVLAYDLHKRLEVYRPRMAYPMEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            QFHS DYV FL R+TPD Q    Q+L ++NLGEDCPVF+ L++FC+ YAG +++ A +L
Sbjct: 61  MQFHSEDYVNFLARVTPDNQEEMHQQLVQFNLGEDCPVFDGLYDFCRRYAGASVEGAVKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N +L DIAINW+GGLHHAKK EASGFCY+NDLVLGILELLKYHARVLY+DID+HHGDGVE
Sbjct: 121 NQELADIAINWSGGLHHAKKAEASGFCYVNDLVLGILELLKYHARVLYVDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRV+TVSFHK+G+ FFPGTGD+K+IGER GKFY+INVP+KDG DD +F RLFK 
Sbjct: 181 EAFYLTDRVLTVSFHKYGNYFFPGTGDLKDIGERHGKFYSINVPMKDGTDDATFHRLFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           I++KV+E ++PGA+VLQCGADSLA DRLGCFNLS++GHAE VRF+KKFN+P+LVTGGGGY
Sbjct: 241 IMAKVMEVFSPGAVVLQCGADSLAADRLGCFNLSLEGHAEAVRFMKKFNVPMLVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHI 347
           TK NV+RCWT ET +L+D  + +++P N+Y +Y+AP+  L + P+ H+
Sbjct: 301 TKNNVSRCWTAETAVLVDQNIADDLPPNDYYEYYAPDYRLHVTPHRHM 348


>gi|303281720|ref|XP_003060152.1| histone deacetylase [Micromonas pusilla CCMP1545]
 gi|226458807|gb|EEH56104.1| histone deacetylase [Micromonas pusilla CCMP1545]
          Length = 430

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 237/334 (70%), Positives = 289/334 (86%), Gaps = 1/334 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SKD+ISYFYD DVG+ Y+G NHPMKPHRL MTHHLVLSYDLHKKME+YRP ++YPVE++Q
Sbjct: 4   SKDRISYFYDADVGTSYYGNNHPMKPHRLAMTHHLVLSYDLHKKMEVYRPRRSYPVEMSQ 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV+FL RITPDTQ    +++ +YNLGEDCP+F+ LF+FC++Y GG+ID A RLN+
Sbjct: 64  FHAEDYVDFLSRITPDTQQDHTEQMQRYNLGEDCPIFDGLFDFCKLYTGGSIDGAVRLNH 123

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            L DIAINW+GGLHHAKK EASGFCYINDLVL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 124 GLSDIAINWSGGLHHAKKSEASGFCYINDLVLAILELLKHHPRVLYIDIDIHHGDGVEEA 183

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+GD+FFPGTG +K++G   GK+Y++NVPL DG+DD  F  +FK+++
Sbjct: 184 FYLTDRVMTVSFHKYGDMFFPGTGALKDVGGDAGKYYSVNVPLLDGMDDAGFRAIFKSVM 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV++ Y PGA+VLQCGADSLA DRLGCFNL++DGHA+CV+F+K+FN+PLLVTGGGGYTK
Sbjct: 244 QKVMDVYQPGAVVLQCGADSLAADRLGCFNLTLDGHADCVKFMKRFNVPLLVTGGGGYTK 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFA 335
            NVARCWT ET  LLD  L  +IPE++ Y +Y+A
Sbjct: 304 SNVARCWTYETAALLDKTLSTDIPEHDFYYEYYA 337


>gi|255082444|ref|XP_002504208.1| histone deacetylase [Micromonas sp. RCC299]
 gi|226519476|gb|ACO65466.1| histone deacetylase [Micromonas sp. RCC299]
          Length = 430

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 234/336 (69%), Positives = 288/336 (85%), Gaps = 1/336 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SKD+I YFYD DVG+ Y+G NHPMKPHRL MTHHLVLSYDLH++ME+YRP ++YPVE+ Q
Sbjct: 4   SKDRICYFYDSDVGTSYYGNNHPMKPHRLAMTHHLVLSYDLHRRMEVYRPRRSYPVEMTQ 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +H+ DYVEFL RITPDT     Q + ++NLGEDCP+F+ LF+FC++Y GG+ID A RLN+
Sbjct: 64  YHAEDYVEFLSRITPDTASEHMQSMQRFNLGEDCPIFDGLFDFCKLYTGGSIDGAVRLNH 123

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            + DIAINW+GGLHHAKK EASGFCYINDLVL ILELLK+HARV+YIDID+HHGDGVEEA
Sbjct: 124 GMSDIAINWSGGLHHAKKAEASGFCYINDLVLAILELLKHHARVVYIDIDIHHGDGVEEA 183

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVM VSFHK+GDLFFPGTG + +IG+  GK+Y++NVPL+DGI D  F  +F+T++
Sbjct: 184 FYMTDRVMCVSFHKYGDLFFPGTGGLNDIGKNAGKYYSVNVPLRDGIHDDGFQDIFQTVM 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV++ Y PGAIVLQCGADSLA DRLGCFNLS+DGHA+CV+F+KKF +PLLVTGGGGYTK
Sbjct: 244 QKVMDVYRPGAIVLQCGADSLAADRLGCFNLSLDGHADCVKFMKKFGVPLLVTGGGGYTK 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAPE 337
            NV+RCWT ET +LLD +LP +IPE++ Y +Y+A +
Sbjct: 304 SNVSRCWTNETAVLLDRKLPKDIPEHDFYYEYYADQ 339


>gi|302842612|ref|XP_002952849.1| hypothetical protein VOLCADRAFT_62995 [Volvox carteri f.
           nagariensis]
 gi|300261889|gb|EFJ46099.1| hypothetical protein VOLCADRAFT_62995 [Volvox carteri f.
           nagariensis]
          Length = 419

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 231/342 (67%), Positives = 285/342 (83%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K+K++YFYD +    YFG NHPMKPHRL MTHHLVL Y LHKKM+++RP KA+P EL
Sbjct: 1   MARKNKVAYFYDSEFQEFYFGQNHPMKPHRLAMTHHLVLGYGLHKKMDVFRPRKAHPAEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHS DYVEFL ++TPD+   +  +L +YN  +DCPVF+N+F+FCQ+YAG +I+ A +L
Sbjct: 61  AQFHSEDYVEFLSKVTPDSAAKYANQLRQYNFNDDCPVFDNMFKFCQLYAGASIEGAVKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+ LCDIAINW+GGLHHAKK EASGFCY+NDLVL ILELLKYHARVLYIDIDVHHGDGVE
Sbjct: 121 NHGLCDIAINWSGGLHHAKKGEASGFCYVNDLVLAILELLKYHARVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+GD FFPGTGD+ + GE  GK+Y++NVPLKDG +D +F  LFK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGDYFFPGTGDLTDTGELNGKYYSLNVPLKDGTNDETFHALFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           I+ +V+E + PGAIV+QCGADSLA DRLGCFN+S+ GH E +RF+K+F +PLL+TGGGGY
Sbjct: 241 IMRRVMEVFQPGAIVMQCGADSLAHDRLGCFNMSLRGHGEAIRFMKEFGVPLLITGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           TK NVARCWT ET IL DT++P ++P ++Y +YFAP+ SL +
Sbjct: 301 TKHNVARCWTYETAILTDTQVPEQLPRSDYHEYFAPDFSLNV 342


>gi|159475411|ref|XP_001695812.1| histone deacetylase [Chlamydomonas reinhardtii]
 gi|158275372|gb|EDP01149.1| histone deacetylase [Chlamydomonas reinhardtii]
          Length = 418

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 226/339 (66%), Positives = 284/339 (83%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K+K++YFYD +    YFG NHPMKPHRL MTHHLVL Y LHKKM+++RP +A+P ELAQF
Sbjct: 6   KNKVAYFYDREFQEFYFGQNHPMKPHRLAMTHHLVLGYGLHKKMDVFRPRRAHPAELAQF 65

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DY+EFL ++TPD+   F  +L +YN+ +DCP+F+N+F+FCQ+YAG +I+ A +LN+ 
Sbjct: 66  HTEDYIEFLSKVTPDSAAKFGNQLRQYNINDDCPIFDNMFKFCQLYAGASIEGAVKLNHN 125

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINW+GGLHHAKK EASGFCYINDLVL ILELLKYHARVLYIDIDVHHGDGVEEAF
Sbjct: 126 LCDIAINWSGGLHHAKKGEASGFCYINDLVLAILELLKYHARVLYIDIDVHHGDGVEEAF 185

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y +DRVMTVSFHK+GD FFPGTGD+ + GE  GK+Y++NVPLKDG +D +F  LFK I+ 
Sbjct: 186 YLSDRVMTVSFHKYGDYFFPGTGDLMDTGELNGKYYSVNVPLKDGTNDDTFHALFKPIMR 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+E + P AIV+QCGADSLA DRLGCFN+S+ GH E +RF+K+F LP+L+TGGGGYTK 
Sbjct: 246 RVMEVFRPEAIVMQCGADSLAHDRLGCFNMSLRGHGEAIRFMKEFGLPMLITGGGGYTKH 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET IL DT++P ++P ++Y +YFAP+ SL +
Sbjct: 306 NVARCWTYETAILTDTQVPEQLPRSDYHEYFAPDFSLNV 344


>gi|157837995|ref|NP_989487.1| histone deacetylase 1 [Gallus gallus]
 gi|3023929|sp|P56517.1|HDAC1_CHICK RecName: Full=Histone deacetylase 1; Short=HD1
 gi|2791684|gb|AAB96923.1| histone deacetylase-1 [Gallus gallus]
 gi|2829214|gb|AAC00504.1| erythrocyte histone deacetylase [Gallus gallus]
          Length = 480

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 222/340 (65%), Positives = 283/340 (83%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|2827430|gb|AAB99850.1| histone deacetylase 1 [Gallus gallus]
          Length = 480

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 222/340 (65%), Positives = 283/340 (83%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|449488911|ref|XP_002194370.2| PREDICTED: histone deacetylase 1, partial [Taeniopygia guttata]
          Length = 466

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 222/340 (65%), Positives = 283/340 (83%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|343055635|gb|AEL79596.1| Histone deacetylase 1 [Pantholops hodgsonii]
          Length = 482

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 282/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y++YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYLEYFGPDFKLHI 345


>gi|417401722|gb|JAA47731.1| Putative histone deacetylase complex catalytic component rpd3
           [Desmodus rotundus]
          Length = 482

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|82697313|ref|NP_001032521.1| histone deacetylase 1 [Bos taurus]
 gi|426221753|ref|XP_004005072.1| PREDICTED: histone deacetylase 1 [Ovis aries]
 gi|122146108|sp|Q32PJ8.1|HDAC1_BOVIN RecName: Full=Histone deacetylase 1; Short=HD1
 gi|81294220|gb|AAI08089.1| Histone deacetylase 1 [Bos taurus]
 gi|152941194|gb|ABS45034.1| histone deacetylase 1 [Bos taurus]
 gi|296490162|tpg|DAA32275.1| TPA: histone deacetylase 1 [Bos taurus]
          Length = 482

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|354476944|ref|XP_003500683.1| PREDICTED: histone deacetylase 1-like [Cricetulus griseus]
 gi|344244005|gb|EGW00109.1| Histone deacetylase 1 [Cricetulus griseus]
          Length = 482

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|301773006|ref|XP_002921911.1| PREDICTED: histone deacetylase 1-like [Ailuropoda melanoleuca]
          Length = 482

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|6680193|ref|NP_032254.1| histone deacetylase 1 [Mus musculus]
 gi|2498444|sp|O09106.1|HDAC1_MOUSE RecName: Full=Histone deacetylase 1; Short=HD1
 gi|1771286|emb|CAA66870.1| histone deacetylase [Mus musculus]
 gi|62027414|gb|AAH92070.1| Hdac1 protein [Mus musculus]
 gi|82568947|gb|AAI08372.1| Hdac1 protein [Mus musculus]
          Length = 482

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|70794768|ref|NP_001020580.1| histone deacetylase 1 [Rattus norvegicus]
 gi|81918177|sp|Q4QQW4.1|HDAC1_RAT RecName: Full=Histone deacetylase 1; Short=HD1
 gi|67678279|gb|AAH97943.1| Histone deacetylase 1 [Rattus norvegicus]
 gi|78174349|gb|AAI07477.1| Histone deacetylase 1 [Rattus norvegicus]
 gi|149024048|gb|EDL80545.1| rCG31110 [Rattus norvegicus]
          Length = 482

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|355694221|gb|AER99597.1| histone deacetylase 1 [Mustela putorius furo]
          Length = 482

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|431891137|gb|ELK02014.1| Histone deacetylase 1 [Pteropus alecto]
          Length = 482

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|332254586|ref|XP_003276411.1| PREDICTED: histone deacetylase 1 isoform 1 [Nomascus leucogenys]
          Length = 482

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|340374777|ref|XP_003385914.1| PREDICTED: hypothetical protein LOC100631864 [Amphimedon
           queenslandica]
          Length = 1313

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 229/371 (61%), Positives = 287/371 (77%), Gaps = 6/371 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M S  KI+YFYD DVGS ++G  HPMKPHRL +TH LVL+Y L+KKME+YRP+KA  ++L
Sbjct: 1   MSSSRKIAYFYDPDVGSFHYGAGHPMKPHRLALTHTLVLNYGLYKKMEVYRPYKASKLDL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FH+ DY++FL R+TP     F   L+++N+G+DCPVF  L++FC +Y G +I+ A +L
Sbjct: 61  CRFHAEDYIDFLQRVTPHNISGFTSSLSRFNVGDDCPVFPGLYDFCCVYTGASIEGAIKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++ CDIAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+
Sbjct: 121 NHESCDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG  +GKFY++NVPLKDGIDD S+  LFK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNFFFPGTGDMYEIGAEKGKFYSLNVPLKDGIDDQSYILLFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II  V+E Y P  IVLQCGADSL  DRLGCFNLSI  H ECV++VK FN+P LV GGGGY
Sbjct: 241 IIHSVIEHYRPSCIVLQCGADSLGCDRLGCFNLSIKAHGECVKYVKSFNIPTLVLGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEI 354
           T  NVARCWT ET +LLDT++ NE+P  EY +YF P+ +L      ++ N +      +I
Sbjct: 301 TIRNVARCWTYETSLLLDTDISNELPYTEYFEYFGPDFTLHPDVSTKMENQNTRQYLDQI 360

Query: 355 DKFILFNKQIL 365
            + +L N +IL
Sbjct: 361 KQHVLENLRIL 371


>gi|296207351|ref|XP_002750618.1| PREDICTED: histone deacetylase 1 isoform 1 [Callithrix jacchus]
          Length = 482

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|197692295|dbj|BAG70111.1| histone deacetylase 1 [Homo sapiens]
          Length = 482

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 218/348 (62%), Positives = 283/348 (81%), Gaps = 1/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++   
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTSQ 353


>gi|426328763|ref|XP_004025419.1| PREDICTED: histone deacetylase 1 isoform 1 [Gorilla gorilla
           gorilla]
          Length = 482

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|332829216|ref|XP_001163573.2| PREDICTED: histone deacetylase 1-like isoform 1 [Pan troglodytes]
 gi|397515944|ref|XP_003828201.1| PREDICTED: histone deacetylase 1 isoform 1 [Pan paniscus]
 gi|383417899|gb|AFH32163.1| histone deacetylase 1 [Macaca mulatta]
 gi|387541662|gb|AFJ71458.1| histone deacetylase 1 [Macaca mulatta]
 gi|410208182|gb|JAA01310.1| histone deacetylase 1 [Pan troglodytes]
 gi|410251922|gb|JAA13928.1| histone deacetylase 1 [Pan troglodytes]
 gi|410295014|gb|JAA26107.1| histone deacetylase 1 [Pan troglodytes]
 gi|410331637|gb|JAA34765.1| histone deacetylase 1 [Pan troglodytes]
          Length = 482

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|13128860|ref|NP_004955.2| histone deacetylase 1 [Homo sapiens]
 gi|197101111|ref|NP_001125738.1| histone deacetylase 1 [Pongo abelii]
 gi|2498443|sp|Q13547.1|HDAC1_HUMAN RecName: Full=Histone deacetylase 1; Short=HD1
 gi|75055017|sp|Q5RAG0.1|HDAC1_PONAB RecName: Full=Histone deacetylase 1; Short=HD1
 gi|1277084|gb|AAC50475.1| histone deacetylase HD1 [Homo sapiens]
 gi|12653071|gb|AAH00301.1| Histone deacetylase 1 [Homo sapiens]
 gi|48479080|gb|AAT44863.1| histone deacetylase 1 [Homo sapiens]
 gi|49456395|emb|CAG46518.1| HDAC1 [Homo sapiens]
 gi|55729026|emb|CAH91250.1| hypothetical protein [Pongo abelii]
 gi|60814459|gb|AAX36302.1| histone deacetylase 1 [synthetic construct]
 gi|61363144|gb|AAX42342.1| histone deacetylase 1 [synthetic construct]
 gi|119627945|gb|EAX07540.1| histone deacetylase 1, isoform CRA_a [Homo sapiens]
 gi|119627946|gb|EAX07541.1| histone deacetylase 1, isoform CRA_a [Homo sapiens]
 gi|123980990|gb|ABM82324.1| histone deacetylase 1 [synthetic construct]
 gi|123995803|gb|ABM85503.1| histone deacetylase 1 [synthetic construct]
 gi|197692561|dbj|BAG70244.1| histone deacetylase 1 [Homo sapiens]
 gi|208966470|dbj|BAG73249.1| histone deacetylase 1 [synthetic construct]
          Length = 482

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|30583783|gb|AAP36140.1| Homo sapiens histone deacetylase 1 [synthetic construct]
 gi|61369536|gb|AAX43347.1| histone deacetylase 1 [synthetic construct]
          Length = 483

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|73949981|ref|XP_544435.2| PREDICTED: histone deacetylase 1 isoform 1 [Canis lupus familiaris]
 gi|410966693|ref|XP_003989864.1| PREDICTED: histone deacetylase 1 isoform 1 [Felis catus]
          Length = 482

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|291408885|ref|XP_002720761.1| PREDICTED: histone deacetylase 1-like [Oryctolagus cuniculus]
          Length = 482

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/346 (63%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMT 351


>gi|114555329|ref|XP_519834.2| PREDICTED: histone deacetylase 1 isoform 6 [Pan troglodytes]
          Length = 482

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/346 (63%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMT 351


>gi|348570686|ref|XP_003471128.1| PREDICTED: histone deacetylase 1-like [Cavia porcellus]
          Length = 482

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|395857855|ref|XP_003801297.1| PREDICTED: histone deacetylase 1 [Otolemur garnettii]
          Length = 482

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|380793123|gb|AFE68437.1| histone deacetylase 1, partial [Macaca mulatta]
          Length = 458

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|403293205|ref|XP_003937612.1| PREDICTED: histone deacetylase 1 [Saimiri boliviensis boliviensis]
          Length = 482

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  + PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSLRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|349605393|gb|AEQ00650.1| Histone deacetylase 1-like protein, partial [Equus caballus]
          Length = 445

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 219/337 (64%), Positives = 279/337 (82%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS
Sbjct: 2   KVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHS 61

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  
Sbjct: 62  DDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQT 121

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY 
Sbjct: 122 DIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYT 181

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +ISKV
Sbjct: 182 TDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKV 240

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NV
Sbjct: 241 MEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNV 300

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           ARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 301 ARCWTYETSVALDTEIPNELPYNDYFEYFGPDFKLHI 337


>gi|2347180|gb|AAB68398.1| putative histone deacetylase [Mus musculus]
          Length = 482

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 280/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPM PHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMXPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|412990268|emb|CCO19586.1| histone deacetylase 3 [Bathycoccus prasinos]
          Length = 423

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 220/339 (64%), Positives = 275/339 (81%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K+KISY+YD +VG+ Y+ PNHPMKPHRL MTH LVL+Y LH+ ++++RP KA   ELAQF
Sbjct: 5   KNKISYYYDSEVGTSYYAPNHPMKPHRLSMTHSLVLAYRLHENLDVFRPRKATTSELAQF 64

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV+FL +ITP+TQH +  ++ ++NLGEDCP+F+ LF+FC+IY+GG+I+ A R+N+ 
Sbjct: 65  HAEDYVDFLSKITPNTQHEYLTQMQRFNLGEDCPIFDGLFDFCKIYSGGSIEGAVRINHG 124

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCYIND+VL  LELLKYHARVLYIDID+HHGDGVEEAF
Sbjct: 125 TSDIAINWSGGLHHAKKSEASGFCYINDIVLATLELLKYHARVLYIDIDIHHGDGVEEAF 184

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGDLFFPGTGD+ +IG   GK+Y++NVPL DG+DD +F  +FK+ + 
Sbjct: 185 YLTDRVMTVSFHKFGDLFFPGTGDLGDIGMNNGKYYSVNVPLHDGMDDQNFIDIFKSTMQ 244

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGAI+LQCGADSLA DRLGCFNL++ GHA CV F+K FN+PLLV GGGGY K 
Sbjct: 245 KVMEVFQPGAIILQCGADSLAADRLGCFNLTLQGHASCVAFMKSFNIPLLVLGGGGYIKS 304

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET  LL   L   IPE+E+   +  + S ++
Sbjct: 305 NVARCWANETATLLGRTLDENIPEHEFYYEYYSDASYQL 343


>gi|302755854|ref|XP_002961351.1| hypothetical protein SELMODRAFT_74186 [Selaginella moellendorffii]
 gi|300172290|gb|EFJ38890.1| hypothetical protein SELMODRAFT_74186 [Selaginella moellendorffii]
          Length = 488

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 224/341 (65%), Positives = 278/341 (81%), Gaps = 1/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SYFYD +VG+ Y+G  HPMKPHR+ MTH L++ Y LH KME+  P +A   +L +
Sbjct: 17  SKRRVSYFYDPEVGNYYYGQGHPMKPHRMRMTHSLLVHYGLHLKMEVVEPFRARDKDLCK 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV+FL ++TP+TQ  F + L ++N+GEDCPVF+ L+ FCQ+Y GG++  A RLN 
Sbjct: 77  FHADDYVDFLKQVTPETQQEFAKVLKRFNVGEDCPVFDGLYSFCQMYTGGSVGGAVRLNT 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK H RVLYIDIDVHHGDGVEEA
Sbjct: 137 NRSDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKQHQRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD FFPGTGD++++G  +GK+Y++NVPL +GIDD S+ RLFK +I
Sbjct: 197 FYTTDRVMTVSFHKFGD-FFPGTGDLRDVGHGKGKYYSVNVPLNEGIDDESYQRLFKPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y PGAIVLQCGADSL+GDRLGCFNLS+ GHAECVRFV+ FN+PLL+ GGGGYT 
Sbjct: 256 SKVMEVYQPGAIVLQCGADSLSGDRLGCFNLSVKGHAECVRFVRSFNVPLLLVGGGGYTV 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            NVARCW  ETG+ +  EL N++P N+Y +YF PE +L +P
Sbjct: 316 RNVARCWCYETGVAVGVELENQMPYNDYYEYFGPEYTLLVP 356


>gi|302802917|ref|XP_002983212.1| hypothetical protein SELMODRAFT_234196 [Selaginella moellendorffii]
 gi|300148897|gb|EFJ15554.1| hypothetical protein SELMODRAFT_234196 [Selaginella moellendorffii]
          Length = 408

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 224/341 (65%), Positives = 278/341 (81%), Gaps = 1/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SYFYD +VG+ Y+G  HPMKPHR+ MTH L++ Y LH KME+  P +A   +L +
Sbjct: 17  SKRRVSYFYDPEVGNYYYGQGHPMKPHRMRMTHSLLVHYGLHLKMEVVEPFRARDKDLCK 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV+FL ++TP+TQ  F + L ++N+GEDCPVF+ L+ FCQ+Y GG++  A RLN 
Sbjct: 77  FHADDYVDFLKQVTPETQQEFAKVLKRFNVGEDCPVFDGLYSFCQMYTGGSVGGAVRLNT 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK H RVLYIDIDVHHGDGVEEA
Sbjct: 137 NRSDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKQHQRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD FFPGTGD++++G  +GK+Y++NVPL +GIDD S+ RLFK +I
Sbjct: 197 FYTTDRVMTVSFHKFGD-FFPGTGDLRDVGHGKGKYYSVNVPLNEGIDDESYQRLFKPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y PGAIVLQCGADSL+GDRLGCFNLS+ GHAECVRFV+ FN+PLL+ GGGGYT 
Sbjct: 256 SKVMEVYQPGAIVLQCGADSLSGDRLGCFNLSVKGHAECVRFVRSFNVPLLLVGGGGYTV 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            NVARCW  ETG+ +  EL N++P N+Y +YF PE +L +P
Sbjct: 316 RNVARCWCYETGVAVGVELENQMPYNDYYEYFGPEYTLLVP 356


>gi|344287540|ref|XP_003415511.1| PREDICTED: histone deacetylase 1-like [Loxodonta africana]
          Length = 482

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 281/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFRPVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GH++CV FV+ FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHSKCVEFVRNFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + L T++PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALSTDIPNELPYNDYFEYFGPDFKLHI 345


>gi|148229549|ref|NP_001079396.1| histone deacetylase 1 [Xenopus laevis]
 gi|27735466|gb|AAH41296.1| MGC53583 protein [Xenopus laevis]
          Length = 480

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 213/346 (61%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVM+VSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLP+L+ GGGGYT 
Sbjct: 246 TKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD+E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMT 351


>gi|340718122|ref|XP_003397521.1| PREDICTED: hypothetical protein LOC100642763 [Bombus terrestris]
          Length = 1431

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L +E+ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 345


>gi|3023928|sp|O42227.1|HDA1B_XENLA RecName: Full=Probable histone deacetylase 1-B; Short=HD1-B;
           AltName: Full=RPD3 homolog
 gi|2444430|gb|AAC60346.1| deacetylase [Xenopus laevis]
          Length = 480

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 213/346 (61%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVM+VSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLP+L+ GGGGYT 
Sbjct: 246 TKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD+E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMT 351


>gi|350585844|ref|XP_003356353.2| PREDICTED: histone deacetylase 1-like, partial [Sus scrofa]
          Length = 482

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 217/339 (64%), Positives = 279/339 (82%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ ++  GDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 8   KKKVCFYSSGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKY 67

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN Q
Sbjct: 68  HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQ 127

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 128 QTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 187

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++S
Sbjct: 188 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMS 246

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  
Sbjct: 247 KVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIR 306

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 307 NVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|148706511|gb|EDL38458.1| mCG128529 [Mus musculus]
          Length = 482

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 279/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY++D+VL I ELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVDDIVLAIPELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+   FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEATFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|1665723|dbj|BAA08909.1| RPD3 protein [Homo sapiens]
 gi|60819522|gb|AAX36503.1| histone deacetylase 1 [synthetic construct]
          Length = 482

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 280/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARC T ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCRTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345


>gi|327288082|ref|XP_003228757.1| PREDICTED: histone deacetylase 1-like [Anolis carolinensis]
          Length = 480

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 213/346 (61%), Positives = 282/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRP+KA   E+ +
Sbjct: 7   TKRKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPYKASAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTASFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+ LQCG+DSL+GDRLGCFNL+I GHA+CV F+K FNLP+L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVALQCGSDSLSGDRLGCFNLTIKGHAKCVEFIKSFNLPMLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + L+TE+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 RNVARCWTYETAVALNTEIPNELPYNDYFEYFGPDFKLHISPSNMT 351


>gi|449273084|gb|EMC82692.1| Histone deacetylase 1, partial [Columba livia]
          Length = 464

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 217/330 (65%), Positives = 275/330 (83%), Gaps = 1/330 (0%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL
Sbjct: 1   GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 60

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN Q  DIA+NWA
Sbjct: 61  RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWA 120

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTV
Sbjct: 121 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTV 180

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +ISKV+ET+ P 
Sbjct: 181 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPS 239

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT E
Sbjct: 240 AVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYE 299

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 300 TAVALDTEIPNELPYNDYFEYFGPDFKLHI 329


>gi|340729598|ref|XP_003403085.1| PREDICTED: histone deacetylase 3-like [Bombus terrestris]
          Length = 456

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 276/340 (81%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K+SYFY+ DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP++A   ++
Sbjct: 28  MSYNKKVSYFYNPDVGNFHYGPGHPMKPHRLAVIHSLVLNYGLHKKMQIYRPYRASTHDM 87

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YVEFL R+TP     + + L+ +N+G+DCPVFE LF+FC +Y G +++ A +L
Sbjct: 88  CRFHSDEYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFEGLFDFCSMYTGASLEGATKL 147

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLKYHARVLYIDIDVHHGDGV+
Sbjct: 148 NNNCCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQ 207

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK 
Sbjct: 208 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYVQVFKP 267

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 268 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNVPLLTVGGGGY 327

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 328 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 367


>gi|351701636|gb|EHB04555.1| Histone deacetylase 1 [Heterocephalus glaber]
          Length = 596

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 216/337 (64%), Positives = 277/337 (82%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++  F  GDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS
Sbjct: 90  QMQRFNVGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHS 149

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN Q  
Sbjct: 150 DDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQT 209

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY 
Sbjct: 210 DIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYT 269

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV
Sbjct: 270 TDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKV 328

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NV
Sbjct: 329 MEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNV 388

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           ARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 389 ARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 425



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 71/92 (77%)

Query: 3  SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
          ++ K+ Y+YDGDVG+ Y+G  HPMKPH++ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7  TRRKVCYYYDGDVGNYYYGQGHPMKPHQIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGE 94
          +HS DY++FL  I PD    + +++ ++N+G+
Sbjct: 67 YHSDDYIKFLCSIRPDNMSEYSKQMQRFNVGD 98


>gi|383859224|ref|XP_003705096.1| PREDICTED: histone deacetylase 3-like [Megachile rotundata]
          Length = 433

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 276/340 (81%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K+SYFY+ DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP++A   ++
Sbjct: 1   MSYNKKVSYFYNPDVGNFHYGPGHPMKPHRLSVIHSLVLNYGLHKKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YVEFL R+TP     + + L+ +N+G+DCPVFE LF+FC +Y G +++ A +L
Sbjct: 61  CRFHSDEYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFEGLFDFCSMYTGASLEGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLKYHARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYVQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNIPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|380020655|ref|XP_003694196.1| PREDICTED: histone deacetylase 3-like [Apis florea]
          Length = 433

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 276/340 (81%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K+SYFY+ DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP++A   ++
Sbjct: 1   MSYNKKVSYFYNPDVGNFHYGPGHPMKPHRLAVIHSLVLNYGLHKKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YVEFL R+TP     + + L+ +N+G+DCPVFE LF+FC +Y G +++ A +L
Sbjct: 61  CRFHSDEYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFEGLFDFCSMYTGASLEGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLKYHARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYVQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNIPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|66514075|ref|XP_395811.2| PREDICTED: histone deacetylase 3 isoform 1 [Apis mellifera]
          Length = 433

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 276/340 (81%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K+SYFY+ DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP++A   ++
Sbjct: 1   MSYNKKVSYFYNPDVGNFHYGPGHPMKPHRLAVIHSLVLNYGLHKKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YVEFL R+TP     + + L+ +N+G+DCPVFE LF+FC +Y G +++ A +L
Sbjct: 61  CRFHSDEYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFEGLFDFCSMYTGASLEGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLKYHARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYVQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNVPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|145343595|ref|XP_001416403.1| histone deacetylase, probable [Ostreococcus lucimarinus CCE9901]
 gi|144576628|gb|ABO94696.1| histone deacetylase, probable [Ostreococcus lucimarinus CCE9901]
          Length = 424

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 219/336 (65%), Positives = 272/336 (80%), Gaps = 1/336 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +K+++ Y+YD +VG  Y+GPNHPMKPHRLCMTH+L+L+YDLHK ++++RP      E 
Sbjct: 1   MVAKERVCYYYDEEVGRNYYGPNHPMKPHRLCMTHNLILAYDLHKHLQVFRPRACTNTEF 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            QFHS DYV+FL +ITPD Q  +  E+ ++NLGEDCP+F+++ +FC+ Y GG+ID  RRL
Sbjct: 61  TQFHSEDYVDFLSKITPDKQQQYVLEMQRFNLGEDCPIFDHMLDFCRRYTGGSIDGVRRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N  + DIAINW+GGLHHAKK EASGFCYINDLVL ILELLK HARV+YIDID+HHGDGVE
Sbjct: 121 NQGVSDIAINWSGGLHHAKKAEASGFCYINDLVLAILELLKQHARVVYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+GD+FFPGTG +++IG   GK+Y++NVPL DGIDD SF  LFK 
Sbjct: 181 EAFYMTDRVMTVSFHKYGDMFFPGTGGLRDIGINSGKYYSVNVPLNDGIDDKSFVDLFKF 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++  V++++ PGAIVLQCGADSLAGDR+GCFNLS+ GHAECV F+K F  P+LVTGGGGY
Sbjct: 241 VMQDVMDSFQPGAIVLQCGADSLAGDRIGCFNLSLKGHAECVSFMKSFAKPILVTGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENE-YIKYFA 335
           TK NVARCW  ET  LL  +L   IP +E Y +Y+A
Sbjct: 301 TKSNVARCWANETATLLGKQLVEHIPPHENYYEYYA 336


>gi|66828287|ref|XP_647498.1| histone deacetylase family protein [Dictyostelium discoideum AX4]
 gi|74859297|sp|Q55FN5.1|HDA11_DICDI RecName: Full=Type-1 histone deacetylase 1; Short=DdHdaA
 gi|60475530|gb|EAL73465.1| histone deacetylase family protein [Dictyostelium discoideum AX4]
          Length = 495

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 220/343 (64%), Positives = 281/343 (81%), Gaps = 2/343 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K+SYFYD +VG+ Y+GPNHPMKPHR+ MTH LVL+Y ++KKM+I+RP KA  +EL  
Sbjct: 2   STRKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTN 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  +TPD  H + ++L K+N+ EDCPVF+ ++ FCQI +GG+I  A ++N+
Sbjct: 62  FHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  D+AINWAGGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 122 KESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+GD +FPGTGDVK+IG  +GK+Y++N PLKDGIDD S+  +F+ II
Sbjct: 182 FYTTDRVMTVSFHKYGD-YFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPII 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y PGA+V+QCGADSL GDRLGCFNL++ GHA+C+ F+K FN+PL+V GGGGYT 
Sbjct: 241 RSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           +NVARCWT ET IL+D+EL +E+P N+Y++Y+ PE  L I PN
Sbjct: 301 KNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPN 343


>gi|350411261|ref|XP_003489290.1| PREDICTED: histone deacetylase 3-like [Bombus impatiens]
          Length = 429

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 276/340 (81%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K+SYFY+ DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP++A   ++
Sbjct: 1   MSYNKKVSYFYNPDVGNFHYGPGHPMKPHRLAVIHSLVLNYGLHKKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YVEFL R+TP     + + L+ +N+G+DCPVFE LF+FC +Y G +++ A +L
Sbjct: 61  CRFHSDEYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFEGLFDFCSMYTGASLEGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLKYHARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYVQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNVPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT E+ +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYESSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|291244267|ref|XP_002742021.1| PREDICTED: histone deacetylase 1-like [Saccoglossus kowalevskii]
          Length = 569

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 279/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 9   SKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTK 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN 
Sbjct: 69  YHSDDYIKFLRSIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNK 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  D+AINW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 129 QQADVAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F+ II
Sbjct: 189 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFEPII 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV FV+KFN+PLL+ GGGGYT 
Sbjct: 248 TKVMEMYQPSAMVLQCGADSLSGDRLGCFNLTLRGHAKCVDFVRKFNMPLLILGGGGYTI 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + L  ++ NE+P N+Y +YF P+  L I
Sbjct: 308 RNVARCWTYETAVALGVDIANELPYNDYFEYFGPDFKLHI 347


>gi|328788017|ref|XP_394976.4| PREDICTED: histone deacetylase Rpd3 isoform 1 [Apis mellifera]
          Length = 492

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L +E+ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 345


>gi|195011655|ref|XP_001983253.1| GH15691 [Drosophila grimshawi]
 gi|193896735|gb|EDV95601.1| GH15691 [Drosophila grimshawi]
          Length = 559

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDEAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|281351786|gb|EFB27370.1| hypothetical protein PANDA_010851 [Ailuropoda melanoleuca]
          Length = 441

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/330 (65%), Positives = 273/330 (82%), Gaps = 1/330 (0%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL
Sbjct: 1   GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 60

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWA
Sbjct: 61  RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWA 120

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTV
Sbjct: 121 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTV 180

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +ISKV+E + P 
Sbjct: 181 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMEMFQPS 239

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT E
Sbjct: 240 AVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYE 299

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 300 TAVALDTEIPNELPYNDYFEYFGPDFKLHI 329


>gi|170042097|ref|XP_001848775.1| histone deacetylase Rpd3 [Culex quinquefasciatus]
 gi|167865633|gb|EDS29016.1| histone deacetylase Rpd3 [Culex quinquefasciatus]
          Length = 489

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 274/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG   GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHI 343


>gi|291244349|ref|XP_002742058.1| PREDICTED: histone deacetylase 3-like [Saccoglossus kowalevskii]
          Length = 432

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/338 (63%), Positives = 276/338 (81%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K  ++YFYD DVG+ ++GP HPMKPHRL +TH LVL+Y L+KKM++YRP++A   ++ +
Sbjct: 2   AKPTVAYFYDADVGNFHYGPGHPMKPHRLALTHSLVLNYGLYKKMQVYRPYRASQHDMCR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y++FL R+TP     F + L+ +N+G+DCPVF  LF+FC +Y G +++ A +LNN
Sbjct: 62  FHSEEYIDFLSRVTPQNIQSFTKSLSHFNVGDDCPVFPGLFDFCAMYTGASLEGATKLNN 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +LCDIA+NWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 122 ELCDIAVNWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y++N+PLKDGIDD ++  LFK +I
Sbjct: 182 FYLTDRVMTVSFHKYGNHFFPGTGDMYEVGSESGRYYSLNIPLKDGIDDHNYGLLFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV+FVK+FN+PLLV GGGGYT 
Sbjct: 242 QMVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIKGHGECVKFVKEFNIPLLVLGGGGYTV 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCWT ETG+LLD  + NE+P NEY +YF+P+ +L
Sbjct: 302 RNVARCWTFETGLLLDQRISNELPYNEYFEYFSPDFTL 339


>gi|350400285|ref|XP_003485786.1| PREDICTED: histone deacetylase Rpd3-like [Bombus impatiens]
          Length = 492

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L +E+ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 345


>gi|440896947|gb|ELR48738.1| Histone deacetylase 1, partial [Bos grunniens mutus]
          Length = 466

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/330 (64%), Positives = 273/330 (82%), Gaps = 1/330 (0%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL
Sbjct: 1   GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 60

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWA
Sbjct: 61  RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWA 120

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTV
Sbjct: 121 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTV 180

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P 
Sbjct: 181 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPS 239

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT E
Sbjct: 240 AVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYE 299

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 300 TAVALDTEIPNELPYNDYFEYFGPDFKLHI 329


>gi|157106706|ref|XP_001649445.1| histone deacetylase [Aedes aegypti]
 gi|108879776|gb|EAT44001.1| AAEL004586-PB [Aedes aegypti]
          Length = 487

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 274/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG   GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHI 343


>gi|320165596|gb|EFW42495.1| histone deacetylase-3 [Capsaspora owczarzaki ATCC 30864]
          Length = 445

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 222/371 (59%), Positives = 285/371 (76%), Gaps = 6/371 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SK ++SYFYD DVG+ ++GP HPMKPHRL +TH+LVL+Y L+KKME+YR  +A   ++
Sbjct: 1   MTSKRRVSYFYDQDVGNFHYGPGHPMKPHRLALTHNLVLNYGLYKKMEVYRASRATDSDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
             FH+ DY++FL R+TPD    F Q L+++N+GEDCPVF+ +++FC IY G ++  A +L
Sbjct: 61  QTFHAPDYIDFLKRVTPDNLSQFSQALSRFNVGEDCPVFDGVYDFCSIYTGASLQGAAKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N Q  DIA+NW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+
Sbjct: 121 NLQTSDIAVNWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ E+G ++GK ++INVPLKDGIDD S+  LF  
Sbjct: 181 EAFYTTDRVMTVSFHKYGNNFFPGTGDLHEVGVQKGKLHSINVPLKDGIDDFSYKMLFNP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II  V+E Y P AIVLQCGADSL  DRLGCFNLSI GH ECV FVK F +P LV GGGGY
Sbjct: 241 IIGAVMENYQPTAIVLQCGADSLGCDRLGCFNLSIKGHGECVNFVKSFGVPTLVVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEI 354
           T  NVARCWT ET +L+DT + N++P N+Y++YFAP+ +L      R+ N +     +++
Sbjct: 301 TIRNVARCWTYETSLLVDTTVSNDLPFNDYLEYFAPDFTLHPDTNTRVENENSRTYLEQL 360

Query: 355 DKFILFNKQIL 365
              +L N + L
Sbjct: 361 KNSVLENLRSL 371


>gi|195587822|ref|XP_002083660.1| GD13856 [Drosophila simulans]
 gi|194195669|gb|EDX09245.1| GD13856 [Drosophila simulans]
          Length = 521

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|328872384|gb|EGG20751.1| histone deacetylase family protein [Dictyostelium fasciculatum]
          Length = 491

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 219/344 (63%), Positives = 280/344 (81%), Gaps = 2/344 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+SYFYD +VG+ Y+G NHPMKPHR+ MTH+L+L+Y ++KK++I+RP KA   +L+ 
Sbjct: 24  SKKKVSYFYDSEVGNHYYGQNHPMKPHRIRMTHNLILNYGIYKKLQIFRPKKATEADLSN 83

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DYV FL  ITPD  H + ++L KYN+  DCPVF+ ++  CQI +GG+I  A +LNN
Sbjct: 84  FHSDDYVNFLRLITPDNMHEYSKQLMKYNVRYDCPVFDGMYNLCQISSGGSIGCAVKLNN 143

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIA+NWAGGLHHAKK E+SGFCY ND+VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 144 KDSDIAVNWAGGLHHAKKSESSGFCYTNDIVLCILELLKHHKRVLYIDIDIHHGDGVEEA 203

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+GD +FPGTGDV+++G  +GK+YA+N PLKDGIDD S+  +F+ +I
Sbjct: 204 FYTTDRVMTVSFHKYGD-YFPGTGDVRDVGASKGKYYALNFPLKDGIDDQSYQSVFRPVI 262

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+++Y P A+VLQCGADSL GDRLGCFNLS+ GHA+CV F+K FNLPL++ GGGGYT 
Sbjct: 263 QSVMDSYRPEAVVLQCGADSLTGDRLGCFNLSLKGHAQCVEFMKSFNLPLVILGGGGYTI 322

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNG 345
           +NVARCWT ET IL+D ELP+E+P N+Y++Y+ P+  L I PN 
Sbjct: 323 KNVARCWTYETSILVDHELPDELPYNDYLEYYGPDYRLHITPNN 366


>gi|383864165|ref|XP_003707550.1| PREDICTED: histone deacetylase Rpd3-like [Megachile rotundata]
          Length = 492

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L +E+ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 345


>gi|195402899|ref|XP_002060037.1| GJ15512 [Drosophila virilis]
 gi|194141835|gb|EDW58248.1| GJ15512 [Drosophila virilis]
          Length = 527

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|24657891|ref|NP_647918.2| Rpd3 [Drosophila melanogaster]
 gi|68068071|sp|Q94517.2|HDAC1_DROME RecName: Full=Histone deacetylase Rpd3; Short=HD; Short=dRPD3
 gi|7292522|gb|AAF47924.1| Rpd3 [Drosophila melanogaster]
 gi|16197909|gb|AAL13716.1| GM14158p [Drosophila melanogaster]
 gi|220944798|gb|ACL84942.1| Rpd3-PA [synthetic construct]
 gi|220954578|gb|ACL89832.1| Rpd3-PA [synthetic construct]
          Length = 521

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|3659524|gb|AAC61494.1| putative histone deacetylase [Drosophila melanogaster]
          Length = 521

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|194866666|ref|XP_001971925.1| GG15241 [Drosophila erecta]
 gi|195337515|ref|XP_002035374.1| GM14673 [Drosophila sechellia]
 gi|190653708|gb|EDV50951.1| GG15241 [Drosophila erecta]
 gi|194128467|gb|EDW50510.1| GM14673 [Drosophila sechellia]
          Length = 521

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|72106652|ref|XP_794761.1| PREDICTED: histone deacetylase 3-like [Strongylocentrotus
           purpuratus]
          Length = 432

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 217/338 (64%), Positives = 275/338 (81%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S   I+YFYD DVG+ ++GP HPMKPHRL +TH+LVL+Y L+KKM+IYRP++A   ++ +
Sbjct: 2   SNKTIAYFYDADVGNFHYGPGHPMKPHRLALTHNLVLNYGLYKKMQIYRPYRATAHDMCR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY++FL R+TP     F + L+ +N+G+DCPVF  LF+FC +Y G +++AA +LNN
Sbjct: 62  FHSDDYIDFLQRVTPQNIQNFTKSLSHFNVGDDCPVFPGLFDFCSMYTGASLEAATKLNN 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            LCDIA+NWAGGLHHAKK EASGFCY+ND+V+ ILE+LKYH RVLYIDID+HHGDGV+EA
Sbjct: 122 NLCDIAVNWAGGLHHAKKFEASGFCYVNDIVIAILEILKYHPRVLYIDIDIHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y+INVPLKDGIDD  ++ LFK +I
Sbjct: 182 FYLTDRVMTVSFHKYGNHFFPGTGDMYEVGLENGRYYSINVPLKDGIDDLMYSGLFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E Y P  IVLQCGADSL  DRLGCF+LSI GH ECV +VK+FN+PLLV GGGGYT 
Sbjct: 242 QSVMEFYRPSCIVLQCGADSLGCDRLGCFSLSIKGHGECVEYVKQFNVPLLVMGGGGYTV 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCWT ET +LL+ E+ NE+P N+Y +YFAP+ +L
Sbjct: 302 RNVARCWTYETSLLLNDEISNELPYNDYFEYFAPDFTL 339


>gi|195429008|ref|XP_002062556.1| GK16595 [Drosophila willistoni]
 gi|194158641|gb|EDW73542.1| GK16595 [Drosophila willistoni]
          Length = 531

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDEAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|62655265|ref|XP_576595.1| PREDICTED: histone deacetylase 1 [Rattus norvegicus]
 gi|109487379|ref|XP_001059685.1| PREDICTED: histone deacetylase 1 [Rattus norvegicus]
          Length = 484

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 216/348 (62%), Positives = 282/348 (81%), Gaps = 3/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TERKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH--GDGVE 180
           Q  DIA+NWAGGLH+AKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HH  GDGVE
Sbjct: 127 QQTDIAVNWAGGLHYAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGDGVE 186

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK 
Sbjct: 187 EAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 245

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GG GY
Sbjct: 246 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGDGY 305

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           T  NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 TIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMT 353


>gi|309400433|gb|ADO79635.1| histone deacetylase [Drosophila nasuta]
          Length = 518

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|309400427|gb|ADO79632.1| histone deacetylase [Drosophila albomicans]
 gi|309400429|gb|ADO79633.1| histone deacetylase [Drosophila nasuta]
 gi|309400431|gb|ADO79634.1| histone deacetylase [Drosophila nasuta]
 gi|309400435|gb|ADO79636.1| histone deacetylase [Drosophila nasuta]
 gi|309400437|gb|ADO79637.1| histone deacetylase [Drosophila nasuta]
          Length = 518

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|307176124|gb|EFN65822.1| Histone deacetylase Rpd3 [Camponotus floridanus]
          Length = 494

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L +E+ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 345


>gi|157106708|ref|XP_001649446.1| histone deacetylase [Aedes aegypti]
 gi|108879777|gb|EAT44002.1| AAEL004586-PA [Aedes aegypti]
          Length = 468

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 274/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG   GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHI 343


>gi|309400439|gb|ADO79638.1| histone deacetylase [Drosophila nasuta]
          Length = 518

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|307209019|gb|EFN86219.1| Histone deacetylase 3 [Harpegnathos saltator]
          Length = 433

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 275/340 (80%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K+SYFY+ DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP++A   ++
Sbjct: 1   MGYNKKVSYFYNPDVGNFHYGPGHPMKPHRLSVIHSLVLNYGLHKKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YVEFL R+TP     + + L+ +N+G+DCPVFE LF+FC +Y G +++ A +L
Sbjct: 61  CRFHSEEYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFEGLFDFCSMYTGASLEGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLKYHARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNFFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDPSYVQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH +CV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGDCVKFVRDLNVPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|118562908|dbj|BAF37798.1| hypothetical protein [Ipomoea trifida]
          Length = 496

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/415 (61%), Positives = 289/415 (69%), Gaps = 70/415 (16%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDG+   ++F  +H ++   L     +  S +   K+ ++  +    V +
Sbjct: 1   MRSKDRISYFYDGE-SPMFFHISH-LQFLDLSFLAWISNSQNPSSKIGVHSIYVFMSVIV 58

Query: 61  AQFHSAD---------YVEFLHRITPDTQHLF--------RQELTKYNLGEDCPVFENLF 103
               SA          + +      P              +Q+   YNLGEDCPVF+NLF
Sbjct: 59  LILDSASRRGRWECLLWAKSSDETAPAVYDSSSGSSLRSPQQDGNLYNLGEDCPVFDNLF 118

Query: 104 EFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 163
           EFCQIYAGGTIDAARRLNNQLCD+AINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH
Sbjct: 119 EFCQIYAGGTIDAARRLNNQLCDVAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 178

Query: 164 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINV 223
            RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK+GD FFPGTGD+K+IGER+GKFYAINV
Sbjct: 179 PRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDKFFPGTGDMKDIGERDGKFYAINV 238

Query: 224 PLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSID------- 276
           P KDGIDD+SF RLF+TIISKVVETY PGAIVLQCGADSLAGDRLGCFNLSID       
Sbjct: 239 PFKDGIDDSSFIRLFRTIISKVVETYIPGAIVLQCGADSLAGDRLGCFNLSIDGASLLVI 298

Query: 277 --------------------------------------------GHAECVRFVKKFNLPL 292
                                                       GHAECVRFVKKFN+PL
Sbjct: 299 KVLFGHHSTFCKDISVVYLFPSTNLSCNFLGDFYMGMFYLMLLAGHAECVRFVKKFNIPL 358

Query: 293 LVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           LVTGGGGYTKENVARCWT ETGILLD+ELPNEIP+N+YIKYF P+ SL+IP GHI
Sbjct: 359 LVTGGGGYTKENVARCWTYETGILLDSELPNEIPDNDYIKYFGPDYSLKIPGGHI 413


>gi|194747495|ref|XP_001956187.1| GF25085 [Drosophila ananassae]
 gi|190623469|gb|EDV38993.1| GF25085 [Drosophila ananassae]
          Length = 525

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|268607740|ref|NP_001161325.1| Rpd3 histone deacetylase [Nasonia vitripennis]
          Length = 492

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDEYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L +E+ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 345


>gi|195125223|ref|XP_002007081.1| GI12742 [Drosophila mojavensis]
 gi|193918690|gb|EDW17557.1| GI12742 [Drosophila mojavensis]
          Length = 525

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L+ E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALNVEIANELPYNDYFEYFGPDFKLHI 343


>gi|158295965|ref|XP_316539.2| AGAP006511-PA [Anopheles gambiae str. PEST]
 gi|157016285|gb|EAA11382.2| AGAP006511-PA [Anopheles gambiae str. PEST]
          Length = 470

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 273/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + + + ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDDYIRFLRSIRPDNMSEYNKHMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG   GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYDSIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHI 343


>gi|168050199|ref|XP_001777547.1| class I RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens]
 gi|162671032|gb|EDQ57590.1| class I RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens]
          Length = 466

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 223/356 (62%), Positives = 282/356 (79%), Gaps = 3/356 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFYD DVG+ Y+G  HPMKPHR+ M H L++ Y+LH +ME+ RP+ A   +L +F
Sbjct: 15  KRRVSYFYDPDVGNYYYGQGHPMKPHRIRMAHSLLVHYNLHTRMEVLRPYPARDRDLCRF 74

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  +TP+TQH   ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 75  HADDYVSFLKEVTPETQHDQMRQLKRFNVGEDCPVFDGLYNFCQTYAGGSVGGAVKLNHG 134

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 135 HSDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 194

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK I+S
Sbjct: 195 YTTDRVMTVSFHKFGD-YFPGTGDVRDIGHGKGKYYSLNVPLDDGIDDESYQSLFKPIMS 253

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLS+ GHAECVRF++ FN+PLL+ GGGGYT  
Sbjct: 254 KVMEVFQPGAVVLQCGADSLSGDRLGCFNLSVKGHAECVRFMRSFNVPLLLVGGGGYTIR 313

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV--CSFKEIDKF 357
           NVARCW  ET + +  EL + +P +EY +YF P+ SL +   ++    S K+ID  
Sbjct: 314 NVARCWCYETAVAVGEELDDRLPHHEYYEYFGPDYSLHVAPSNMANQNSKKDIDNL 369


>gi|332024743|gb|EGI64932.1| Histone deacetylase 3 [Acromyrmex echinatior]
          Length = 433

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K++YFY+ +VG+ ++GP HPMKPHRL + H LVL+Y LH+KM+IYRP++A   ++
Sbjct: 1   MSYNKKVAYFYNPEVGNFHYGPGHPMKPHRLSVIHSLVLNYGLHRKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYVEFL R+TP     + + L+ +N+G+DCPVF+ LF+FC +Y G ++D A +L
Sbjct: 61  CRFHSEDYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFDGLFDFCSMYTGASLDGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIA+NW+GGLHHAKK EASGFCYIND+V+ ILELLKY ARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAVNWSGGLHHAKKFEASGFCYINDIVIAILELLKYRARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYIQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNVPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|307215210|gb|EFN89982.1| Histone deacetylase Rpd3 [Harpegnathos saltator]
          Length = 498

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 12  SRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 71

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 72  FHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 131

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 132 QASDICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 191

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 192 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 250

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 251 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 310

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 311 RNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHI 350


>gi|195491828|ref|XP_002093731.1| GE21462 [Drosophila yakuba]
 gi|194179832|gb|EDW93443.1| GE21462 [Drosophila yakuba]
          Length = 521

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  ++ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHI 343


>gi|325179608|emb|CCA14006.1| histone deacetylase putative [Albugo laibachii Nc14]
          Length = 502

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 219/344 (63%), Positives = 273/344 (79%), Gaps = 3/344 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K +++YFY  D G  Y+GP HPMKPHR+ +THHLV++YDL++KM+++ PH A P E+
Sbjct: 52  MGGKTRVAYFYHPDEGHFYYGPGHPMKPHRMKLTHHLVVNYDLYRKMDVFEPHWASPEEI 111

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FHS +Y++FL R+TP  Q  F QEL K+N G+  DCPVF+ +F+FC+IY+GGT+DAA 
Sbjct: 112 KAFHSPEYIDFLQRVTPTNQKEFSQELQKFNCGDFTDCPVFDGVFDFCRIYSGGTLDAAH 171

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           RLN+ LCDIAINWAGGLHHAKK E SGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDG
Sbjct: 172 RLNHGLCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLRYHPRVLYIDIDVHHGDG 231

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY TDRVMTVSFHK+GD FFPGTGD+K++G + GK+YA+N PL  G+ D S+T +F
Sbjct: 232 VEEAFYVTDRVMTVSFHKYGD-FFPGTGDIKDLGAKNGKYYAVNFPLLSGMTDESYTNIF 290

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I+KV+ET+ P A+VLQCGADSL GDRLGCFN++  GH ECV FVK +  PLLV GGG
Sbjct: 291 KPVIAKVMETFQPSAVVLQCGADSLTGDRLGCFNVTTKGHGECVEFVKSYGFPLLVLGGG 350

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           GYT  NVAR W  ET +LL  E+ N IP N+Y +Y+AP   L +
Sbjct: 351 GYTIRNVARAWAYETAVLLGEEVSNNIPYNDYFEYYAPSFKLHL 394


>gi|330841173|ref|XP_003292577.1| hypothetical protein DICPUDRAFT_40779 [Dictyostelium purpureum]
 gi|325077173|gb|EGC30904.1| hypothetical protein DICPUDRAFT_40779 [Dictyostelium purpureum]
          Length = 473

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 219/343 (63%), Positives = 280/343 (81%), Gaps = 2/343 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K+SYFY+ +VG+ Y+GPNHPMKPHR+ MTH LVL+Y ++KKM I+RP KA  +EL  
Sbjct: 2   STRKVSYFYENEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMSIFRPRKASDLELTN 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  +TPD  H + ++L K+N+ EDCPVF+ ++ FCQI +GG+I  A ++N+
Sbjct: 62  FHSDDYINFLKLVTPDNMHDYSKQLIKFNVREDCPVFDGMYNFCQISSGGSIGCAVKINS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  D+AINWAGGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 122 KESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+GD +FPGTGDVK+IG  +GK+Y++N PLKDGIDD S+  +F+ II
Sbjct: 182 FYTTDRVMTVSFHKYGD-YFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPII 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y PGA+V+QCGADSL GDRLGCFNL++ GHA+CV F+K FN+PL+V GGGGYT 
Sbjct: 241 QSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCVEFLKSFNVPLVVLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           +NVARCWT ET IL+D++L +E+P N+Y++Y+ PE  L I PN
Sbjct: 301 KNVARCWTYETSILVDSDLQDELPYNDYLEYYGPEYRLHITPN 343


>gi|322790471|gb|EFZ15349.1| hypothetical protein SINV_01613 [Solenopsis invicta]
          Length = 433

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 275/340 (80%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K++YFY+ +VG+ ++GP HPMKPHRL + H LVL+Y LH+KM+IYRP++A   ++
Sbjct: 1   MSYNKKVAYFYNPEVGNFHYGPGHPMKPHRLSVIHSLVLNYGLHRKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYVEFL R+TP     + + L+ +N+G+DCPVF+ LF+FC +Y G ++D A +L
Sbjct: 61  CRFHSEDYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFDGLFDFCSMYTGASLDGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIA+NW+GGLHHAKK EASGFCYIND+V+ ILELLKY ARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAVNWSGGLHHAKKFEASGFCYINDIVIAILELLKYRARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYIQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNVPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|348681323|gb|EGZ21139.1| hypothetical protein PHYSODRAFT_542338 [Phytophthora sojae]
          Length = 459

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 220/342 (64%), Positives = 271/342 (79%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++SYFY  + G  Y+GP HPMKPHR+ + HHLV++YDL++KM+I+ PH A   E+  
Sbjct: 5   TKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKN 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRL 120
           FH+ DY++FL RI+P  Q     EL KYNLGE  DCPVF+ +F+FCQIY+GGT+DA  RL
Sbjct: 65  FHAPDYIDFLQRISPSNQKDLATELQKYNLGELTDCPVFDGIFDFCQIYSGGTLDAVSRL 124

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+  CDIAINWAGGLHHAKK E SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVE
Sbjct: 125 NHGQCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVE 184

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+GD FFPGTGD+K+IG + GK+YA+N PL  G++D S+  +FK 
Sbjct: 185 EAFYVTDRVMTVSFHKYGD-FFPGTGDIKDIGTKNGKYYAVNFPLLSGMNDESYESVFKP 243

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I KV+ET+AP A+VLQCGADSL GDRLGCFN++  GH ECV+FVK F LP+LV GGGGY
Sbjct: 244 VIQKVMETFAPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGY 303

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NV+R W  ET ILLD E+ N IP N+Y +++AP   L +
Sbjct: 304 TIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHL 345


>gi|332020933|gb|EGI61327.1| Histone deacetylase Rpd3 [Acromyrmex echinatior]
          Length = 497

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 12  SRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 71

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 72  FHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 131

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 132 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 191

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 192 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESIFVPII 250

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 251 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTI 310

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 311 RNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHI 350


>gi|391342916|ref|XP_003745761.1| PREDICTED: histone deacetylase 3-like [Metaseiulus occidentalis]
          Length = 412

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 218/338 (64%), Positives = 273/338 (80%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK  + Y +D DVG+ ++GP HPMKP R+ +TH LVL+Y LH+KM IYRP++A P ++ +
Sbjct: 5   SKRDVVYLWDPDVGNFHYGPGHPMKPQRIAVTHSLVLNYGLHRKMRIYRPYRANPHDMCK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL RITP     F ++ T +N+G+DCPVF  L++FC +Y G +ID A RLNN
Sbjct: 65  FHSEEYVNFLQRITPQNMESFDKKETLFNVGDDCPVFSGLYDFCSLYTGASIDGAWRLNN 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           + CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLK +ARVLYIDIDVHHGDGV+EA
Sbjct: 125 RTCDIAINWSGGLHHAKKFEASGFCYINDIVVAILELLKTYARVLYIDIDVHHGDGVQEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVS HK+G  FFPGTGD+ E+G   GK+YA+NVPLK+GIDD S+ ++FKT+I
Sbjct: 185 FYLTDRVMTVSLHKYGAYFFPGTGDMYEVGAESGKYYALNVPLKEGIDDASYFQVFKTVI 244

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V++ Y PGA+VLQCGADSLAGDRLGCFNLSI GH +CV+FV+  N+PLLV GGGGYT 
Sbjct: 245 SSVIDHYRPGAVVLQCGADSLAGDRLGCFNLSIKGHGDCVKFVRDLNIPLLVLGGGGYTL 304

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVAR WT ET IL++ ++  EIP NEY+++FAP+ SL
Sbjct: 305 RNVARAWTNETAILVNEQVSPEIPYNEYLEFFAPDFSL 342


>gi|91079762|ref|XP_966633.1| PREDICTED: similar to histone deacetylase [Tribolium castaneum]
 gi|270003320|gb|EEZ99767.1| hypothetical protein TcasGA2_TC002540 [Tribolium castaneum]
          Length = 490

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 212/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+ ++F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYEKIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP ++ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFMMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+R WT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRAWTYETSVALGVEIANELPYNDYFEYFGPDFKLHI 345


>gi|332027663|gb|EGI67731.1| Histone deacetylase Rpd3 [Acromyrmex echinatior]
          Length = 495

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 212/339 (62%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +F
Sbjct: 7   KKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q
Sbjct: 67  HSDDYIRFLRSIRPDNMGEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQ 126

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAF
Sbjct: 127 ASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAF 186

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD++++G  +GK+YA+N+PL+DG+DD S+  +F  IIS
Sbjct: 187 YTTDRVMTVSFHKYGE-YFPGTGDLRDMGAGKGKYYAVNIPLRDGMDDESYESIFVPIIS 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVK++NLP L+ GGGGYT  
Sbjct: 246 KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGGGYTIR 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 306 NVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHI 344


>gi|198463008|ref|XP_001352649.2| GA20378 [Drosophila pseudoobscura pseudoobscura]
 gi|198151073|gb|EAL30147.2| GA20378 [Drosophila pseudoobscura pseudoobscura]
          Length = 530

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  ++ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHI 343


>gi|168062190|ref|XP_001783065.1| class I RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens]
 gi|162665449|gb|EDQ52134.1| class I RPD3 type histone deacetylase protein [Physcomitrella
           patens subsp. patens]
          Length = 404

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/358 (62%), Positives = 284/358 (79%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFYD DVG+ Y+G  HPMKPHR+ M H L++ Y+LH +ME+ RP+ A   +L +F
Sbjct: 15  KRRVSYFYDPDVGNYYYGQGHPMKPHRIRMAHSLLVHYNLHTRMEVLRPYPARDRDLCRF 74

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  +TP+TQH   ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 75  HADDYVSFLKEVTPETQHDQMRQLKRFNVGEDCPVFDGLYNFCQTYAGGSVGGAVKLNHG 134

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 135 HSDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 194

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK I+S
Sbjct: 195 YTTDRVMTVSFHKFGD-YFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYQSLFKPIMS 253

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLS+ GHAECVRF++ FN+PLL+ GGGGYT  
Sbjct: 254 KVMEVFQPGAVVLQCGADSLSGDRLGCFNLSVKGHAECVRFMRSFNVPLLLVGGGGYTIR 313

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV--CSFKEIDKFIL 359
           NVARCW  ET + +  EL +++P +EY +YF P+ SL +   ++    S K++D   +
Sbjct: 314 NVARCWCYETAVAVGEELDDKLPHHEYYEYFGPDYSLHVAPSNMANQNSKKDLDNLRM 371


>gi|405978350|gb|EKC42750.1| Histone deacetylase 3 [Crassostrea gigas]
          Length = 434

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 211/334 (63%), Positives = 275/334 (82%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YF D DVG+ ++GP HPMKPHR+ +TH LVL+Y+LH KMEIYRP+KA   ++ +FHS 
Sbjct: 10  VAYFLDPDVGNFHYGPGHPMKPHRIALTHSLVLNYNLHSKMEIYRPYKASAHDMCRFHSE 69

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           +Y++FL R++P+    F ++L+ +N+G+DCPVF+ LF+FC  Y G +++ A +LNN+ CD
Sbjct: 70  EYIDFLQRVSPNNVTNFTKQLSMFNVGDDCPVFDGLFDFCSKYTGASLEGAVKLNNKHCD 129

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IA+NW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 130 IAVNWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 189

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ EIG   G+ Y++NVPLK+GIDD ++ +LF+ ++  V+
Sbjct: 190 DRVMTVSFHKYGNYFFPGTGDMYEIGAESGRHYSVNVPLKEGIDDQTYIQLFQQVMKSVM 249

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  +VLQCGADSL  DRLGCFNLSI GH ECVR VK+FN+P+LV GGGGYTK NVA
Sbjct: 250 DFYQPTCVVLQCGADSLGNDRLGCFNLSIKGHGECVRIVKEFNIPMLVLGGGGYTKRNVA 309

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           RCWT ET +LL+ EL NEIP N+YI+YFAP+ +L
Sbjct: 310 RCWTHETAVLLNEELNNEIPFNDYIQYFAPDFTL 343


>gi|309400441|gb|ADO79639.1| histone deacetylase [Drosophila nasuta]
          Length = 518

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 274/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFC + AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCPLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|328709372|ref|XP_001946324.2| PREDICTED: histone deacetylase Rpd3-like [Acyrthosiphon pisum]
          Length = 491

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 211/339 (62%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +F
Sbjct: 7   KKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL  I PD  + + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q
Sbjct: 67  HSDEYIRFLRSIRPDNMNDYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQ 126

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAF
Sbjct: 127 SADICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAF 186

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II+
Sbjct: 187 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESIFVPIIT 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVK++ LP L+ GGGGYT  
Sbjct: 246 KVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKRYGLPFLMVGGGGYTIR 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 306 NVSRCWTYETAVALGAEIANELPYNDYFEYFGPDFKLHI 344


>gi|357620335|gb|EHJ72565.1| histone deacetylase Rpd3 [Danaus plexippus]
          Length = 481

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 272/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH  CV  VK+F LP L+ GGGGYT 
Sbjct: 244 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHI 343


>gi|157128411|ref|XP_001655108.1| histone deacetylase [Aedes aegypti]
 gi|108872597|gb|EAT36822.1| AAEL011117-PA [Aedes aegypti]
          Length = 431

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 214/338 (63%), Positives = 276/338 (81%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K+SYF++ DVG+ ++GP HPMKPHRL + HHLV++Y LHKKM+IYRP+KA   ++ +
Sbjct: 2   SSKKVSYFFNPDVGNFHYGPGHPMKPHRLSVIHHLVMNYGLHKKMQIYRPYKASAHDMCR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+EFL R+TP     + + L+ +N+G+DCPVF+ LFEFC +Y G +++ A++LN+
Sbjct: 62  FHSDEYIEFLQRVTPQNIQGYTKCLSVFNVGDDCPVFDGLFEFCAMYTGASLEGAQKLNH 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+EA
Sbjct: 122 NHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK +I
Sbjct: 182 FYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYVQVFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V+E Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK  N+P LV GGGGYT 
Sbjct: 242 SAVMEFYQPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKDLNVPTLVVGGGGYTL 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCWT ET +L+D  + NE+P N+Y+++FAP+ +L
Sbjct: 302 RNVARCWTYETSLLIDETISNELPMNDYLEFFAPDFTL 339


>gi|307190022|gb|EFN74242.1| Histone deacetylase 3 [Camponotus floridanus]
          Length = 433

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 274/340 (80%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K++YFY+ +VG+ ++GP HPMKPHRL + H LVL+Y LH+KM+IYRP++A   ++
Sbjct: 1   MSYNKKVAYFYNPEVGNFHYGPGHPMKPHRLSVIHSLVLNYGLHRKMQIYRPYRASTHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYVEFL R+TP     + + L+ +N+G+DCPVF+ LF+FC +Y G ++D A +L
Sbjct: 61  CRFHSEDYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFDGLFDFCSMYTGASLDGATKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN  CDIA+NW+GGLHHAKK EASGFCYIND+V+ ILELLKY ARVLYIDIDVHHGDGV+
Sbjct: 121 NNNCCDIAVNWSGGLHHAKKFEASGFCYINDIVIAILELLKYRARVLYIDIDVHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDGSYIQVFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FV+  N+PLL  GGGGY
Sbjct: 241 VISHVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVRDLNVPLLTVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 301 TLRNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 340


>gi|156537111|ref|XP_001602930.1| PREDICTED: histone deacetylase 3-like [Nasonia vitripennis]
          Length = 434

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 274/340 (80%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           + S  K+SYFY+ DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP++A   ++
Sbjct: 2   LSSNRKVSYFYNPDVGNFHYGPGHPMKPHRLSVIHSLVLNYGLHKKMQIYRPYRASRHDM 61

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YVEFL R+TP     + + L+ +N+G+DCPVF+ LF+FC +Y G +++ A +L
Sbjct: 62  CRFHSDEYVEFLQRVTPQNLQGYTKYLSHFNVGDDCPVFDGLFDFCSMYTGASLEGATKL 121

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN+ CDIAINW+GGLHHAKK EASGFCYIND+V+ ILELLKYHARVLYIDIDVHHGDGV+
Sbjct: 122 NNKSCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQ 181

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK 
Sbjct: 182 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDASYVQVFKP 241

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
            IS V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV++V+  N+PLL  GGGGY
Sbjct: 242 CISNVMEYFRPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKYVRDLNIPLLTVGGGGY 301

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +L+D  + NE+P  EYI+YF P+ +L
Sbjct: 302 TLRNVARCWTYETSLLVDEPISNELPLTEYIEYFGPDFTL 341


>gi|281206669|gb|EFA80855.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 2068

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 219/344 (63%), Positives = 277/344 (80%), Gaps = 2/344 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+SYFYD +VG+ Y+G NHPMKPHR+ MTH+LVL+Y ++KK++I+RP KA   +L  
Sbjct: 2   SKKKVSYFYDNEVGNHYYGQNHPMKPHRIRMTHNLVLNYGVYKKLQIFRPRKAVENDLTN 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  ITPD  + + ++L KYN+  DCPVF+ ++ FCQI +GG+I AA +LN 
Sbjct: 62  FHSDDYINFLRLITPDNMNDYSKQLIKYNVRYDCPVFDGMYNFCQISSGGSIGAAIKLNR 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DI+INWAGGLHHAKK EASGFCY ND+VL ILELLK+H RV+YIDID+HHGDGVEEA
Sbjct: 122 KDSDISINWAGGLHHAKKSEASGFCYTNDIVLAILELLKHHKRVVYIDIDIHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+GD +FPGTGDVK++G  +GK+YA+N PLKDGIDD S+  +FK ++
Sbjct: 182 FYTTDRVMTVSFHKYGD-YFPGTGDVKDLGAGKGKYYALNFPLKDGIDDHSYQSIFKPVM 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+++Y P AIVLQCGADSL GDRLG FNLS+ GHA+CV F+K FNLPL++ GGGGYT 
Sbjct: 241 QGVMDSYRPEAIVLQCGADSLTGDRLGGFNLSLRGHAQCVEFMKSFNLPLMILGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNG 345
           +NVARCW  ET IL+D EL +E+P N+Y++YF P+  L I PN 
Sbjct: 301 KNVARCWAYETSILVDQELSDELPYNDYLEYFGPDYRLHITPNN 344


>gi|242011686|ref|XP_002426578.1| histone deacetylase, putative [Pediculus humanus corporis]
 gi|212510718|gb|EEB13840.1| histone deacetylase, putative [Pediculus humanus corporis]
          Length = 428

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 213/338 (63%), Positives = 271/338 (80%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK  +SYFY  DVG+ ++GP HPMKPHRL + H LVL+Y LHKKM+IYRP+KA   ++ +
Sbjct: 2   SKKTVSYFYSPDVGNFHYGPGHPMKPHRLSVIHSLVLNYGLHKKMQIYRPYKASAHDMCR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YVEFL R+TP     + + L  +N+G+DCPVFE L++FC +Y G +++ A +LNN
Sbjct: 62  FHSDEYVEFLQRVTPQNLQNYTKYLAHFNVGDDCPVFEGLYDFCSMYTGASLEGATKLNN 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDIDVHHGDGV+EA
Sbjct: 122 NCCDIAINWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDDTS+ ++FK +I
Sbjct: 182 FYLTDRVMTVSFHKYGNCFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYVQVFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E Y P AIVLQCGADSLA DRLGCF+LS  GH ECV+ ++  N+PLL  GGGGYT 
Sbjct: 242 HSVMEFYQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKLIRDLNVPLLAVGGGGYTL 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCWT ET +L++ ++ NE+P  EY++YFAP+ +L
Sbjct: 302 RNVARCWTYETSLLVEEQISNELPLTEYLEYFAPDFTL 339


>gi|332375094|gb|AEE62688.1| unknown [Dendroctonus ponderosae]
          Length = 473

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 274/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   SRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 67  FHSDDYIRFLRSIRPDNMAEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 127 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPII 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP ++ GGGGYT 
Sbjct: 246 SKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFMMVGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+R WT ET + L  ++ NE+P N+Y +YF P+  L I
Sbjct: 306 RNVSRAWTYETSVALGVDIANELPYNDYFEYFGPDFKLHI 345


>gi|301121530|ref|XP_002908492.1| histone deacetylase, putative [Phytophthora infestans T30-4]
 gi|262103523|gb|EEY61575.1| histone deacetylase, putative [Phytophthora infestans T30-4]
          Length = 461

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 219/342 (64%), Positives = 269/342 (78%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++SYFY  + G  Y+GP HPMKPHR+ + HHLV++YDL++KM+I+ PH A   E+  
Sbjct: 5   TKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKA 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRL 120
           FH+ DY++FL RI+P  Q     EL KYNLGE  DCPVF+ +F+FCQIY+GGT+DA  RL
Sbjct: 65  FHAPDYIDFLQRISPSNQKDLTSELQKYNLGELTDCPVFDGIFDFCQIYSGGTLDAVSRL 124

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+  CDIAINWAGGLHHAKK E SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVE
Sbjct: 125 NHGQCDIAINWAGGLHHAKKLEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVE 184

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+GD FFPGTGD+K+IG + GK+YA+N PL  G+ D S+  +FK 
Sbjct: 185 EAFYVTDRVMTVSFHKYGD-FFPGTGDIKDIGTKNGKYYAVNFPLLSGMTDESYESVFKP 243

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I KV+ET+ P A+VLQCGADSL GDRLGCFN++  GH ECV+FVK F LP+LV GGGGY
Sbjct: 244 VIQKVMETFCPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGY 303

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NV+R W  ET ILLD E+ N IP N+Y +++AP   L +
Sbjct: 304 TIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHL 345


>gi|66475162|ref|XP_625348.1| RPD3/HD1 histone deacetylase [Cryptosporidium parvum Iowa II]
 gi|46226348|gb|EAK87357.1| RPD3/HD1 histone deacetylase [Cryptosporidium parvum Iowa II]
          Length = 460

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/347 (65%), Positives = 270/347 (77%), Gaps = 5/347 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           ++   ++SYFYDGD+GS Y+GP HPMKP R+ M H+L+LSYDL+K MEIY+PHK+   EL
Sbjct: 15  LKMAKRVSYFYDGDIGSYYYGPGHPMKPQRIRMAHNLILSYDLYKHMEIYKPHKSPQSEL 74

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FH  DY+ FL  I PD    F  +L ++NLGE  DCPVF+ LFEF QI AGG+ID A 
Sbjct: 75  VYFHEEDYINFLSSINPDNSKDFGLQLKRFNLGETTDCPVFDGLFEFQQICAGGSIDGAY 134

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LNN+  DI INW+GGLHHAK+ EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDG
Sbjct: 135 KLNNEQSDICINWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG 194

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY + RV+TVSFHKFG+ FFPGTGD+ +IG  +GK+Y++NVPL DGIDD SF  LF
Sbjct: 195 VEEAFYLSHRVLTVSFHKFGE-FFPGTGDITDIGVAQGKYYSVNVPLNDGIDDDSFLSLF 253

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K IISK +E Y PGAIVLQCGADS+ GDRLG FNLSI GHAECV F KKFN+PLL+ GGG
Sbjct: 254 KPIISKCIEVYRPGAIVLQCGADSVRGDRLGRFNLSIKGHAECVEFCKKFNIPLLILGGG 313

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIP 343
           GYT  NVAR W  ET  +LD    + + IP N+Y  YFAP+  L IP
Sbjct: 314 GYTIRNVARTWAYETATILDRTDLISDNIPLNDYYDYFAPDFKLHIP 360


>gi|347965386|ref|XP_322018.5| AGAP001143-PA [Anopheles gambiae str. PEST]
 gi|333470535|gb|EAA01056.5| AGAP001143-PA [Anopheles gambiae str. PEST]
          Length = 433

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 213/335 (63%), Positives = 275/335 (82%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K+SYF++ DVG+ ++GP HPMKPHRL + HHLV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   KVSYFFNPDVGNFHYGPGHPMKPHRLSVIHHLVMNYGLHKKMQIYRPYKASAHDMCRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFL R+TP     + + L+ +N+G+DCPVF+ LFEFC +Y G +++ A++LN+   
Sbjct: 65  DEYIEFLQRVTPQNIQGYTKCLSVFNVGDDCPVFDGLFEFCAMYTGASLEGAQKLNHNHS 124

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+EAFY 
Sbjct: 125 DICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYL 184

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK +IS V
Sbjct: 185 TDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYVQVFKPVISAV 244

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK  N+P LV GGGGYT  NV
Sbjct: 245 MEFYQPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKDLNVPTLVVGGGGYTLRNV 304

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           ARCWT ET +L+D  + NE+P N+Y+++FAP+ +L
Sbjct: 305 ARCWTYETSLLIDETISNELPMNDYLEFFAPDFTL 339


>gi|195176220|ref|XP_002028716.1| GL22935 [Drosophila persimilis]
 gi|194111629|gb|EDW33672.1| GL22935 [Drosophila persimilis]
          Length = 530

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 274/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATDDEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I P+    +++++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPENMTEYKKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY  DRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTADRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  ++ NE+P N Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVDIANELPYNYYFEYFGPDFKLHI 343


>gi|260799294|ref|XP_002594632.1| hypothetical protein BRAFLDRAFT_217516 [Branchiostoma floridae]
 gi|229279867|gb|EEN50643.1| hypothetical protein BRAFLDRAFT_217516 [Branchiostoma floridae]
          Length = 462

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 212/339 (62%), Positives = 276/339 (81%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K KI Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KRKICYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASFEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q
Sbjct: 69  HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAF
Sbjct: 129 QADIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD ++  +F+ ++S
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDEAYEHIFEPVMS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P AIVLQCGADSL+GDRLGCFNLS+ GH +CV F+KKFN+P+L+ GGGGYT  
Sbjct: 248 KVMEMYQPSAIVLQCGADSLSGDRLGCFNLSLKGHGKCVEFMKKFNIPILMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET I L  ++ NE+P N+Y +Y+ P+  L I
Sbjct: 308 NVARCWTFETSIALGCDVANELPYNDYFEYYGPDFKLHI 346


>gi|156378388|ref|XP_001631125.1| predicted protein [Nematostella vectensis]
 gi|156218159|gb|EDO39062.1| predicted protein [Nematostella vectensis]
          Length = 431

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 210/338 (62%), Positives = 271/338 (80%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ YFYD DVG+ ++GP HPMKPHRL +TH+LV +Y LHKKME+Y+P++A   ++++
Sbjct: 2   TKKRVVYFYDEDVGNFHYGPGHPMKPHRLTLTHNLVFNYGLHKKMEVYKPYRATNHDMSR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS+DY++FL R+T        + ++ +N+GEDCPVF  LF+FC IY G +++ A RLN 
Sbjct: 62  FHSSDYIDFLSRVTIQNNPNLSKSMSDFNVGEDCPVFPGLFDFCSIYTGASLEGAVRLNQ 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            +CDIAINWAGGLHHAKKCEASGFCY+ND+V+ ILELLKYH RVLY+DID+HHGDGV+EA
Sbjct: 122 GICDIAINWAGGLHHAKKCEASGFCYVNDIVVAILELLKYHNRVLYVDIDIHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G+ Y++NVPL+DGIDD ++  LFK +I
Sbjct: 182 FYLTDRVMTVSFHKYGNHFFPGTGDMYEVGVDNGRLYSVNVPLRDGIDDQNYASLFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           + V++ Y P  IVLQCGADSL  DRLGCFNLS  GH ECVRF+K FNLP+LV GGGGYT 
Sbjct: 242 NMVIDHYQPTCIVLQCGADSLGCDRLGCFNLSTKGHGECVRFMKTFNLPMLVLGGGGYTI 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCW  ET +L+D ++  EIP N+Y++YF P+ SL
Sbjct: 302 RNVARCWAYETSLLVDQQVSTEIPYNDYLEYFGPDFSL 339


>gi|91087867|ref|XP_969419.1| PREDICTED: similar to histone deacetylase [Tribolium castaneum]
 gi|270012009|gb|EFA08457.1| hypothetical protein TcasGA2_TC006104 [Tribolium castaneum]
          Length = 431

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 217/368 (58%), Positives = 285/368 (77%), Gaps = 6/368 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SYF++ DVG+ ++G  HPMKPHRL + H LVL+Y LHK M+IYRP+KA   ++ +
Sbjct: 2   SKHRVSYFFNPDVGNFHYGTGHPMKPHRLSVIHSLVLNYGLHKHMQIYRPYKASAHDMCR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y++FL ++TP     F + L+ YN+G+DCPVF  LF+FC +Y G +++ A +LNN
Sbjct: 62  FHSDEYIDFLQKVTPQNIQAFTKHLSHYNVGDDCPVFWGLFDFCSMYTGASLEGAMKLNN 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NW+GGLHHAKK EASGFCY+ND+V+GILELLKYHARVLYIDIDVHHGDGV+EA
Sbjct: 122 NHCDIAVNWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHARVLYIDIDVHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y++NVPLK+GIDD+S+  +FK +I
Sbjct: 182 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYSVNVPLKEGIDDSSYWMVFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V+E + P AIVLQCGADSLA DRLGCF+LS  GH ECV+FVK  N+P LV GGGGYT 
Sbjct: 242 SSVMEFFQPTAIVLQCGADSLANDRLGCFSLSTKGHGECVKFVKSLNVPTLVVGGGGYTL 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDK 356
            NVARCWT ET +L+D ++ NE+P  EY+++FAP+ +L      R  N +     + I K
Sbjct: 302 RNVARCWTYETSLLVDEQISNELPYTEYLEFFAPDFTLHPEVVTRQENANSRQYLEAITK 361

Query: 357 FILFNKQI 364
           F+  N ++
Sbjct: 362 FVCDNLKM 369


>gi|2583090|gb|AAC23917.1| putative histone deacetylase HDAC1 [Drosophila melanogaster]
          Length = 522

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 212/341 (62%), Positives = 275/341 (80%), Gaps = 2/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GE+CPVF+ L++FCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGENCPVFDGLYDFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYT 301
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+V GGGGYT
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVVGGGGYT 303

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
              V+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 IRKVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 344


>gi|67620407|ref|XP_667698.1| histone deacetylase [Cryptosporidium hominis TU502]
 gi|54658857|gb|EAL37469.1| histone deacetylase [Cryptosporidium hominis]
          Length = 444

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/342 (66%), Positives = 268/342 (78%), Gaps = 5/342 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +ISYFYDGD+GS Y+GP HPMKP R+ M H+L+LSYDL+K MEIY+PHK+   EL  FH 
Sbjct: 4   RISYFYDGDIGSYYYGPGHPMKPQRIRMAHNLILSYDLYKHMEIYKPHKSPQSELVYFHE 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY+ FL  I PD    F  +L ++NLGE  DCPVF+ LFEF QI AGG+ID A +LNN+
Sbjct: 64  EDYINFLSSINPDNSKDFGLQLKRFNLGETTDCPVFDGLFEFQQICAGGSIDGAYKLNNE 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INW+GGLHHAK+ EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QSDICINWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y + RV+TVSFHKFG+ FFPGTGD+ +IG  +GK+Y++NVPL DGIDD SF  LFK IIS
Sbjct: 184 YLSHRVLTVSFHKFGE-FFPGTGDITDIGVAQGKYYSVNVPLNDGIDDDSFLSLFKPIIS 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K +E Y PGAIVLQCGADS+ GDRLG FNLSI GHAECV F KKFN+PLL+ GGGGYT  
Sbjct: 243 KCIEVYRPGAIVLQCGADSVRGDRLGRFNLSIKGHAECVEFCKKFNIPLLILGGGGYTIR 302

Query: 304 NVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIP 343
           NVAR W  ET  +LD    + + IP N+Y  YFAP+  L IP
Sbjct: 303 NVARTWAYETATILDRTDLISDNIPLNDYYDYFAPDFKLHIP 344


>gi|397599110|gb|EJK57351.1| hypothetical protein THAOC_22614 [Thalassiosira oceanica]
          Length = 443

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 214/342 (62%), Positives = 270/342 (78%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SYFY  DVG  Y+GP+HPMKPHR+ M HHL+LSY L++KME+YR H A P E++ 
Sbjct: 4   SKQRVSYFYQPDVGHFYYGPSHPMKPHRIKMAHHLILSYGLYRKMEVYRSHPASPAEMSA 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRL 120
           FHS DY+ FL ++TPD    +  ++ K+N+GE  DCPVF+ L+EF Q+Y G ++D A +L
Sbjct: 64  FHSEDYINFLAKVTPDNLRGYSNQMQKFNVGEYTDCPVFDGLYEFTQLYTGASLDGAVKL 123

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N   CD+A+NW+GGLHHAKK EASGFCYIND+VL ILELLK HARVLYIDIDVHHGDGVE
Sbjct: 124 NRGDCDVAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKVHARVLYIDIDVHHGDGVE 183

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMT S HK+GD FFPGTG +K+ G +EG  Y++NVPL  G+ D ++ ++FK 
Sbjct: 184 EAFYCTDRVMTFSLHKYGD-FFPGTGHIKDTGAKEGTGYSVNVPLTSGMTDDAYEKIFKP 242

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++ K++E + PGAIVLQCGADSL GDRLGCFNLS+ GHAECVR+ K F +P LV GGGGY
Sbjct: 243 VMDKIMEVFRPGAIVLQCGADSLTGDRLGCFNLSLKGHAECVRYTKSFGVPTLVLGGGGY 302

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ET +LLDT+LP+EIP N+Y +Y+AP+  L +
Sbjct: 303 TIRNVARCWAYETSVLLDTKLPDEIPYNDYYEYYAPDFKLHL 344


>gi|432947249|ref|XP_004083964.1| PREDICTED: histone deacetylase 2-like [Oryzias latipes]
          Length = 489

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 220/346 (63%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 9   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    F +++ ++N+GEDCPVF+ LFEFCQ+ AGG+   A +LN 
Sbjct: 69  YHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSAAGAVKLNR 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 129 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+ ++FK ++
Sbjct: 189 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFKPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 248 SKVMEMYQPSAVVLQCGSDSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLMLGGGGYTI 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LDTE+P+E+P N+Y +YF P+  L I   ++ 
Sbjct: 308 RNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMT 353


>gi|391337144|ref|XP_003742933.1| PREDICTED: histone deacetylase 1-like [Metaseiulus occidentalis]
          Length = 481

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 210/341 (61%), Positives = 273/341 (80%), Gaps = 2/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L+++MEIYRPHKA   E+ +
Sbjct: 8   SKKRVCYYYDGDIGNYYYGQGHPMKPHRMRMTHNLILNYGLYRRMEIYRPHKATQEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS +Y+ FL  I PD    + + + K+N+GEDCPVF+ L+EFCQ+  GG++  A +LN 
Sbjct: 68  YHSDEYIRFLRSIRPDNMSEYNKFMQKFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 128 QATDIAVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDVHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR-LFKTI 241
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD  +T  +FK +
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDEQYTEAVFKPL 246

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           ++KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GH  CV F++KFN+PLL  GGGGYT
Sbjct: 247 MTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTLKGHGRCVEFMRKFNVPLLQLGGGGYT 306

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 307 IRNVSRCWTYETAVALGVEIANELPYNDYFEYFGPDFKLHI 347


>gi|32398650|emb|CAD98610.1| histone deacetylase [Cryptosporidium parvum]
          Length = 444

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/342 (66%), Positives = 268/342 (78%), Gaps = 5/342 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYDGD+GS Y+GP HPMKP R+ M H+L+LSYDL+K MEIY+PHK+   EL  FH 
Sbjct: 4   RVSYFYDGDIGSYYYGPGHPMKPQRIRMAHNLILSYDLYKHMEIYKPHKSPQSELVYFHE 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY+ FL  I PD    F  +L ++NLGE  DCPVF+ LFEF QI AGG+ID A +LNN+
Sbjct: 64  EDYINFLSSINPDNSKDFGLQLKRFNLGETTDCPVFDGLFEFQQICAGGSIDGAYKLNNE 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INW+GGLHHAK+ EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QSDICINWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y + RV+TVSFHKFG+ FFPGTGD+ +IG  +GK+Y++NVPL DGIDD SF  LFK IIS
Sbjct: 184 YLSHRVLTVSFHKFGE-FFPGTGDITDIGVAQGKYYSVNVPLNDGIDDDSFLSLFKPIIS 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K +E Y PGAIVLQCGADS+ GDRLG FNLSI GHAECV F KKFN+PLL+ GGGGYT  
Sbjct: 243 KCIEVYRPGAIVLQCGADSVRGDRLGRFNLSIKGHAECVEFCKKFNIPLLILGGGGYTIR 302

Query: 304 NVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIP 343
           NVAR W  ET  +LD    + + IP N+Y  YFAP+  L IP
Sbjct: 303 NVARTWAYETATILDRTDLISDNIPLNDYYDYFAPDFKLHIP 344


>gi|340373564|ref|XP_003385311.1| PREDICTED: histone deacetylase 1-like [Amphimedon queenslandica]
          Length = 539

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPH A   E+  +
Sbjct: 9   KRRVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHPATQEEMTGY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL  I PD    + + + ++N+GEDCPVF+ ++EFCQ+ AGG+I AA ++N Q
Sbjct: 69  HSDEYIRFLKSIRPDNVGEYTKLMQRFNVGEDCPVFDGMYEFCQLSAGGSIAAAVKINKQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIA+NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 ESDIAVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+K+IG  +GK+YA+N PL+DGIDD S+  +FK +I+
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLKDIGSDKGKYYAVNFPLRDGIDDESYQSIFKPVIT 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P AIVLQCGADSLAGDRLGCFNLS+ GHAECV F+++FNLP+++ GGGGYT  
Sbjct: 248 KVMEVYRPSAIVLQCGADSLAGDRLGCFNLSLKGHAECVDFMRRFNLPIVLLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET   L+  + NE+P N+Y +YF P+  L I
Sbjct: 308 NVARCWTYETSTALNCVVANELPYNDYFEYFGPDFKLHI 346


>gi|432937508|ref|XP_004082434.1| PREDICTED: histone deacetylase 1-like isoform 2 [Oryzias latipes]
          Length = 455

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/352 (62%), Positives = 284/352 (80%), Gaps = 1/352 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCSFKEI 354
            NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I   ++    + I
Sbjct: 307 RNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQMQPI 358


>gi|380012355|ref|XP_003690250.1| PREDICTED: histone deacetylase Rpd3-like, partial [Apis florea]
          Length = 486

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 210/336 (62%), Positives = 272/336 (80%), Gaps = 1/336 (0%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           + +++  D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS 
Sbjct: 5   LCFYFSSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSD 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  +
Sbjct: 65  DYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASE 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY T
Sbjct: 125 ICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+
Sbjct: 185 DRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVM 243

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NV+
Sbjct: 244 ETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTIRNVS 303

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           RCWT ET + L +E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHI 339


>gi|167517142|ref|XP_001742912.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779536|gb|EDQ93150.1| predicted protein [Monosiga brevicollis MX1]
          Length = 462

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/347 (64%), Positives = 281/347 (80%), Gaps = 2/347 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SK  +SY+YDGDVG+ Y+GP HPMKPHR+ MTH+L+L+Y L+KKMEIYRPHKA   ++
Sbjct: 1   MASKKHVSYYYDGDVGNYYYGPGHPMKPHRIRMTHNLLLNYGLYKKMEIYRPHKASMEDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DY+ FL  I+PD  +   + ++++N+GEDCPVF+ LFEFCQI AGG++  A +L
Sbjct: 61  TRFHSDDYINFLRTISPDATNEETKNMSRFNVGEDCPVFDGLFEFCQISAGGSLAGAAKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+Q  DI INWAGGLHHAK+ EASGFCY+ND+VLGILELLK H RVLYIDID+HHGDGVE
Sbjct: 121 NSQQSDICINWAGGLHHAKRSEASGFCYVNDIVLGILELLKRHERVLYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ +FPGTGD+K+IG ++G+ YA+N PLKD IDD S+ R+F+ 
Sbjct: 181 EAFYCTDRVMTVSFHKYGE-YFPGTGDIKDIGTQDGRHYAVNFPLKDHIDDDSYQRIFRQ 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I KV++ Y PGA+VLQCGADSL GDRLGCFNLS+ GHA CV +VK FN PLL+ GGGGY
Sbjct: 240 VIEKVMDWYDPGAVVLQCGADSLTGDRLGCFNLSLKGHAACVEYVKSFNKPLLLLGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGH 346
           T  NVARCWT ET + LDT + +E+P N+Y +YF P+  L I P+ H
Sbjct: 300 TIRNVARCWTYETSVALDTPIEDELPFNDYFEYFGPDFRLHISPSNH 346


>gi|299115608|emb|CBN75810.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 414

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 218/365 (59%), Positives = 283/365 (77%), Gaps = 9/365 (2%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K ++SYFY GD+G  Y+GP HPMKPHRL + HHL+LSY+L+++M++YRPH A   EL
Sbjct: 1   MSEKRRVSYFYQGDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTEL 60

Query: 61  AQFHSADYVEFLHRITPDT---QHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTID 115
            +FH ADYV FL ++ P     Q    Q+ TK+++GE  DCPVFE L+ FCQ Y G +ID
Sbjct: 61  MRFHQADYVNFLEKVMPGPARGQGTGPQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASID 120

Query: 116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH 175
            A +LN+ + DI INW+GGLHHAKK EASGFCY+ND+VL ILELLKYH+RVLYIDID+HH
Sbjct: 121 GAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHH 180

Query: 176 GDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFT 235
           GDGVEEAFY TDRVMT+SFHK+GD FFPGTGD+K++G + GK+Y++N PL++GIDD SF 
Sbjct: 181 GDGVEEAFYTTDRVMTLSFHKYGD-FFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFE 239

Query: 236 RLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
            +FK +++KV+E Y P A+VLQCGADSL GDRLGCFNL++ GHAE V+ VK F +P+LV 
Sbjct: 240 SIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVL 299

Query: 296 GGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHI--VCSFK 352
           GGGGYT  NVARCW  ETG+LL  E+   IP N+Y +Y+AP+  L + P+ H+  + + +
Sbjct: 300 GGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQ 359

Query: 353 EIDKF 357
           E+D+ 
Sbjct: 360 ELDRL 364


>gi|348517417|ref|XP_003446230.1| PREDICTED: probable histone deacetylase 1-B-like [Oreochromis
           niloticus]
          Length = 490

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/340 (64%), Positives = 280/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I
Sbjct: 307 RNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHI 346


>gi|40555832|gb|AAH64650.1| Hdac1 protein [Danio rerio]
          Length = 457

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/352 (62%), Positives = 283/352 (80%), Gaps = 1/352 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCSFKEI 354
            NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I   ++    + I
Sbjct: 307 RNVARCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQMQAI 358


>gi|223995841|ref|XP_002287594.1| histone deactylase 1 HDAC Hda1p HDA1 [Thalassiosira pseudonana
           CCMP1335]
 gi|220976710|gb|EED95037.1| histone deactylase 1 HDAC Hda1p HDA1 [Thalassiosira pseudonana
           CCMP1335]
          Length = 419

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 212/342 (61%), Positives = 268/342 (78%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++SYFY  DVG  Y+GP+HPMKPHR+ M HHL+LSY ++++ME Y+ H A P E+A 
Sbjct: 15  NKQRVSYFYQPDVGHFYYGPSHPMKPHRIKMAHHLILSYGMYRQMECYKSHPASPSEMAA 74

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRL 120
           FHS DY+ F+ ++TPD    F   + ++N+GE  DCPVF+ LFEF Q+Y G ++D A +L
Sbjct: 75  FHSEDYINFMAKVTPDNLRGFSNAMNRFNVGEYTDCPVFDGLFEFTQLYTGASLDGAVKL 134

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N   CDIA+NW+GGLHHAKK EASGFCYIND+VL ILE+LK HARVLYIDIDVHHGDGVE
Sbjct: 135 NRGDCDIAVNWSGGLHHAKKSEASGFCYINDIVLAILEMLKVHARVLYIDIDVHHGDGVE 194

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMT S HK+GD FFPGTG +K+ G +EG  +++N PL  G+ D ++ +LFK 
Sbjct: 195 EAFYCTDRVMTFSLHKYGD-FFPGTGHIKDTGAKEGTGFSVNAPLTSGMTDGTYEKLFKP 253

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++SK++E + PGAIVLQCGADSL GDRLGCFNLS+ GHAECV+F K FN+P LV GGGGY
Sbjct: 254 VLSKIMEVFQPGAIVLQCGADSLTGDRLGCFNLSLKGHAECVKFTKSFNVPTLVLGGGGY 313

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ET +LLD ELP+EIP N+Y +Y+AP+  L +
Sbjct: 314 TIRNVARCWAYETSVLLDMELPDEIPYNDYYEYYAPDFKLHL 355


>gi|432937506|ref|XP_004082433.1| PREDICTED: histone deacetylase 1-like isoform 1 [Oryzias latipes]
          Length = 476

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/340 (64%), Positives = 280/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I
Sbjct: 307 RNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHI 346


>gi|226478802|emb|CAX72896.1| histone deacetylase 1/2 [Schistosoma japonicum]
          Length = 537

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/343 (64%), Positives = 281/343 (81%), Gaps = 1/343 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KME+YRP KAY  ++ +FHS
Sbjct: 8   KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPSKAYSEDMTRFHS 67

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL  I PD  H F +++ ++N+GEDCPVF+ LFEFCQ+ AGGTI AA +LN Q  
Sbjct: 68  DEYVKFLKNIRPDNMHEFNKQMQRFNVGEDCPVFDGLFEFCQLSAGGTIAAAVKLNKQQT 127

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NW GGLHHAKK EASGFCYIND+V+GILELLKYH RVLY+DID+HHGDGVEEAFY 
Sbjct: 128 DIAVNWGGGLHHAKKSEASGFCYINDIVIGILELLKYHQRVLYVDIDIHHGDGVEEAFYT 187

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTGD+K+IG   GK+YA+N PL+DG+DD  + R+FK +++KV
Sbjct: 188 TDRVMTVSFHKYGE-YFPGTGDLKDIGAGRGKYYAVNCPLRDGMDDDCYERIFKPVVTKV 246

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +ET+ PGA+VLQCGADSL+GDRLGCFNLS+ GH +CV FV+ F LPLL+ GGGGYT  NV
Sbjct: 247 METFRPGAVVLQCGADSLSGDRLGCFNLSLKGHGKCVEFVRSFPLPLLLVGGGGYTIRNV 306

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ARCWT ET I L TE+PN++P N+Y +YF P+  L I   ++ 
Sbjct: 307 ARCWTNETSIALATEIPNDLPYNDYYEYFGPDFKLHISPSNMA 349


>gi|67533353|ref|XP_662097.1| hypothetical protein AN4493.2 [Aspergillus nidulans FGSC A4]
 gi|8886512|gb|AAF80489.1|AF163862_1 histone deacetylase RpdA [Emericella nidulans]
 gi|40741646|gb|EAA60836.1| hypothetical protein AN4493.2 [Aspergillus nidulans FGSC A4]
 gi|259482684|tpe|CBF77396.1| TPA: Histone deacetylase RpdAPutative uncharacterized protein ;
           [Source:UniProtKB/TrEMBL;Acc:Q9P4F5] [Aspergillus
           nidulans FGSC A4]
          Length = 687

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 212/341 (62%), Positives = 271/341 (79%), Gaps = 2/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           RSK +++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ 
Sbjct: 24  RSK-RVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPASKFEMT 82

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y++FL ++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN
Sbjct: 83  QFHTDEYIDFLSKVTPDNMDAFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLN 142

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEE
Sbjct: 143 RNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEE 202

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK+YA+N PL+DGIDD S+  +F+ +
Sbjct: 203 AFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPV 261

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT
Sbjct: 262 IKSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLIVGGGGYT 321

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETGIL+   L +E+P N+Y +YFAP+  L +
Sbjct: 322 MRNVARTWAFETGILVGDNLGSELPYNDYYEYFAPDYELDV 362


>gi|212543437|ref|XP_002151873.1| histone deacetylase RpdA/Rpd3 [Talaromyces marneffei ATCC 18224]
 gi|210066780|gb|EEA20873.1| histone deacetylase RpdA/Rpd3 [Talaromyces marneffei ATCC 18224]
          Length = 668

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 216/354 (61%), Positives = 276/354 (77%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 21  KVAYFYDSDVGNYAYVSGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 80

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 81  DEYIDFLSKVTPDNMEQYAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 140

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 141 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAFYT 200

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK+YA+N PL+DGIDD S+  +F+ +IS V
Sbjct: 201 TDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKYYAVNFPLRDGIDDVSYKSIFEPVISNV 259

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP LV GGGGYT  NV
Sbjct: 260 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTLVLGGGGYTMRNV 319

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHIVCSFKE-IDKF 357
           AR W  ETGILL+ +L +++P N+Y +YF+P+  L + P+     + KE +DK 
Sbjct: 320 ARTWAFETGILLNEQLDSQLPYNDYYEYFSPDYELDVRPSNMDNANTKEYLDKI 373


>gi|290996398|ref|XP_002680769.1| histone deacetylase [Naegleria gruberi]
 gi|284094391|gb|EFC48025.1| histone deacetylase [Naegleria gruberi]
          Length = 421

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/342 (66%), Positives = 279/342 (81%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M     ISYFYDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L+K +E+YRPH A  VE+
Sbjct: 1   MPKHQNISYFYDGDVGNYYYGQGHPMKPHRIKMTHNLLLNYGLYKHLEVYRPHPASEVEM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FH+ +YVEFL R+TPD  H F+++L  +N+GEDCPVF+ LFEFC++ AGG+I AA +L
Sbjct: 61  CKFHADEYVEFLKRVTPDNMHDFQKQLQAFNVGEDCPVFDGLFEFCKLSAGGSIGAAVKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++  DIAINWAGGLHHAKK EASGFCYIND+VL ILELLKYHARVLYIDID+HHGDGVE
Sbjct: 121 NHEQSDIAINWAGGLHHAKKNEASGFCYINDIVLAILELLKYHARVLYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHKFG+ +FPGTGD+K+IG   GK+YA+N PLKDGIDD S+  +FK 
Sbjct: 181 EAFYTTDRVMTVSFHKFGEQYFPGTGDIKDIGAGAGKYYALNFPLKDGIDDESYLSIFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I KV++ + PGA+VLQCGADSL GDRLGCFNL+  GHA CV FVK F LPLLV GGGGY
Sbjct: 241 VIEKVMQVFRPGAVVLQCGADSLTGDRLGCFNLTTKGHAACVDFVKTFGLPLLVLGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCWT ET +LL  ++ +E+P N+Y +YF P+ +L +
Sbjct: 301 TVRNVARCWTYETSVLLGIDIESEMPYNDYFEYFGPDYNLHL 342


>gi|27545221|ref|NP_775343.1| histone deacetylase 1 [Danio rerio]
 gi|21105403|gb|AAM34645.1|AF506201_1 histone deaceytlase 1 [Danio rerio]
          Length = 480

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/340 (64%), Positives = 280/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           +NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I
Sbjct: 307 KNVARCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHI 346


>gi|71896231|ref|NP_001025564.1| histone deacetylase 1 [Xenopus (Silurana) tropicalis]
 gi|60688073|gb|AAH90604.1| histone deacetylase 1 [Xenopus (Silurana) tropicalis]
          Length = 480

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 216/346 (62%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HP+KPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPIKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ ++ +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASSVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLPLL+ GGGGYT 
Sbjct: 246 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD+E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMT 351


>gi|45382059|ref|NP_990078.1| histone deacetylase 3 [Gallus gallus]
 gi|3023932|sp|P56520.1|HDAC3_CHICK RecName: Full=Histone deacetylase 3; Short=HD3
 gi|2791688|gb|AAB96925.1| histone deacetylase-3 [Gallus gallus]
          Length = 428

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 217/365 (59%), Positives = 280/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++YA+NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L+D  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|55716026|gb|AAH85375.1| Histone deacetylase 1 [Danio rerio]
 gi|182892182|gb|AAI65208.1| Hdac1 protein [Danio rerio]
          Length = 480

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/346 (63%), Positives = 282/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD+ +PNE+P ++Y +YF P+  L I   ++ 
Sbjct: 307 RNVARCWTFETAVALDSTIPNELPYSDYFEYFGPDFKLHISPSNMT 352


>gi|147901906|ref|NP_001084011.1| histone deacetylase 2 [Xenopus laevis]
 gi|51703484|gb|AAH81054.1| Hdac2 protein [Xenopus laevis]
          Length = 488

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 218/346 (63%), Positives = 282/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   AKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNR 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  D+A+NWAGGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK II
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT 
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|348531120|ref|XP_003453058.1| PREDICTED: histone deacetylase 2-like [Oreochromis niloticus]
          Length = 480

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 216/346 (62%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KME+YRPHKA   E+ +
Sbjct: 9   TKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPHKATADEMTK 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    F +++ ++N+GEDCPVF+ LFEFCQ+ AGG+   + +LN 
Sbjct: 69  YHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSAAGSVKLNR 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 129 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+ ++FK ++
Sbjct: 189 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFKPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 248 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLMLGGGGYTI 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LDT++P+E+P N+Y +YF P+  L I   ++ 
Sbjct: 308 RNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMT 353


>gi|149242429|ref|XP_001526465.1| histone deacetylase RPD3 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450588|gb|EDK44844.1| histone deacetylase RPD3 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 576

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 209/345 (60%), Positives = 276/345 (80%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++F+ R++PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFISRVSPDNLDLFAKESVKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPLI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK+VE Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ FVK FN+PL+V GGGGYT 
Sbjct: 255 SKIVEWYQPSAIVLQCGGDSLSGDRLGCFNLSMEGHANCINFVKSFNIPLMVLGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NVAR W  E+G+L + +LP E+P NEY +Y+AP  +L + N ++
Sbjct: 315 RNVARTWAFESGLLNNVKLPQELPYNEYYEYYAPNYTLEVRNSNM 359


>gi|209154478|gb|ACI33471.1| Probable histone deacetylase 1-B [Salmo salar]
          Length = 498

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 219/346 (63%), Positives = 281/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANGEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 TKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 307 RNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|384875340|gb|AFI26262.1| Rpd3 [Drosophila melanogaster]
          Length = 521

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 210/340 (61%), Positives = 271/340 (79%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIY    A   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYXXXXATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343


>gi|332373028|gb|AEE61655.1| unknown [Dendroctonus ponderosae]
          Length = 435

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 210/338 (62%), Positives = 273/338 (80%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SYF++ DVG+ ++G  HPMKPHRL + + LVL+Y LHK M++YRP++A   ++ +
Sbjct: 2   SKQRVSYFFNPDVGNFHYGTGHPMKPHRLSVINSLVLNYGLHKHMQVYRPYQATVQDMCR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL ++TP     F ++L+ YN+G+DCPVF  LFEFC +Y G +++ A +LNN
Sbjct: 62  FHTDEYIDFLQKVTPQNMSSFTKQLSNYNVGDDCPVFYGLFEFCSMYTGASLEGAMKLNN 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINWAGGLHHAKK +ASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+EA
Sbjct: 122 NDCDIAINWAGGLHHAKKFDASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFP TGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK +I
Sbjct: 182 FYVTDRVMTVSFHKYGNNFFPATGDMYEIGAESGRYYSVNVPLKEGIDDASYWQVFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V+E Y P AIVLQCGADSLAGDRLG F+LS  GH ECV+FVK  N+P LV GGGGYT 
Sbjct: 242 SNVMEFYQPTAIVLQCGADSLAGDRLGLFSLSNKGHGECVKFVKSLNVPTLVVGGGGYTL 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCWT ET +L+D ++ NE+P  EY++YFAP+ +L
Sbjct: 302 RNVARCWTYETSLLVDEQISNELPYTEYLEYFAPDFTL 339


>gi|432884274|ref|XP_004074466.1| PREDICTED: probable histone deacetylase 1-B-like isoform 2 [Oryzias
           latipes]
          Length = 469

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 279/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 246 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKGFNLPLLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHI 345


>gi|410927892|ref|XP_003977374.1| PREDICTED: histone deacetylase 2-like [Takifugu rubripes]
          Length = 479

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 217/346 (62%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 9   TKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    F +++ ++N+GEDCPVF+ LFEFCQ+ AGG+   + +LN 
Sbjct: 69  YHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSAAGSVKLNR 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 129 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+ ++FK ++
Sbjct: 189 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFKPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 248 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLMLGGGGYTI 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LDT++P+E+P N+Y +YF P+  L I   ++ 
Sbjct: 308 RNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMT 353


>gi|170055402|ref|XP_001863566.1| histone deacetylase 3 [Culex quinquefasciatus]
 gi|167875389|gb|EDS38772.1| histone deacetylase 3 [Culex quinquefasciatus]
          Length = 431

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 210/335 (62%), Positives = 273/335 (81%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K+SYF++ DVG+ ++GP HPMKPHRL + HHLV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   KVSYFFNPDVGNFHYGPGHPMKPHRLSVIHHLVMNYGLHKKMQIYRPYKASAHDMCRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL R+TP     + + L+ +N+G+DCPVF+ LFEFC +Y G +++ A++LN+   
Sbjct: 65  DEYIDFLQRVTPQNIQGYTKCLSTFNVGDDCPVFDGLFEFCAMYTGASLEGAQKLNHNHS 124

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+EAFY 
Sbjct: 125 DICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYL 184

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+   FK +I+ V
Sbjct: 185 TDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYVATFKPVITYV 244

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK  N+P LV GGGGYT  NV
Sbjct: 245 MDFYKPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKDLNVPTLVVGGGGYTLRNV 304

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           ARCWT ET +L+D  + NE+P N+Y+++FAP+ +L
Sbjct: 305 ARCWTYETSLLIDETISNELPMNDYLEFFAPDFTL 339


>gi|145343628|ref|XP_001416418.1| histone deacetylase [Ostreococcus lucimarinus CCE9901]
 gi|144576643|gb|ABO94711.1| histone deacetylase [Ostreococcus lucimarinus CCE9901]
          Length = 487

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K KI+YFYD +VG+ Y+G  HPMKPHR+ MTH+L+L YDL+K ME+++P  A   ++ QF
Sbjct: 2   KKKIAYFYDQEVGNFYYGQGHPMKPHRMRMTHNLLLHYDLYKDMEVFQPTPAQADDMTQF 61

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+EFL  +TPD QH   ++L ++N+ EDCPVF+ LF FCQ+Y GG++  A RLN+ 
Sbjct: 62  HSDEYIEFLRLVTPDNQHEHMRQLKRFNVAEDCPVFDGLFRFCQLYTGGSVGGAVRLNHG 121

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           L +  INW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVEEAF
Sbjct: 122 LSETVINWSGGLHHAKKSEASGFCYVNDIVLAILELLKQHQRVLYIDIDIHHGDGVEEAF 181

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFG+ +FPGTG +++IG+  GK+Y++NVPLKDGIDD S+  L+K ++S
Sbjct: 182 YTTDRVMTVSFHKFGE-YFPGTGHLQDIGQHAGKYYSVNVPLKDGIDDESYELLYKPLMS 240

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+V Q GADSL+GDRLGCFNLSI GHAEC++++  FN+PLLV GGGGYT  
Sbjct: 241 KVMEIYQPDAVVFQSGADSLSGDRLGCFNLSIKGHAECLKYMTTFNVPLLVLGGGGYTIR 300

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG LLD EL + +P+N+Y +YF P  +L I
Sbjct: 301 NVARCWAYETGCLLDRELVDAMPQNDYSEYFGPTHTLHI 339


>gi|126216326|gb|ABN81193.1| histone deacetylase 1 [Schistosoma mansoni]
          Length = 517

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 218/343 (63%), Positives = 280/343 (81%), Gaps = 1/343 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KME+YRP KAY  ++ +FHS
Sbjct: 8   KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPSKAYSEDMTRFHS 67

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL  + PD  H F +++ ++N+GEDCPVF+ LFEFCQ+ AGG+I AA +LN Q  
Sbjct: 68  DEYVKFLKNVRPDNMHEFNKQMQRFNVGEDCPVFDGLFEFCQLSAGGSIAAAVKLNKQQT 127

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW GGLHHAKK EASGFCYIND+V+GILELLKYH RVLY+DID+HHGDGVEEAFY 
Sbjct: 128 DIAINWGGGLHHAKKSEASGFCYINDIVIGILELLKYHQRVLYVDIDIHHGDGVEEAFYT 187

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTGD+K+IG   GK+YA+N PL+DG+DD  + R+FK +++KV
Sbjct: 188 TDRVMTVSFHKYGE-YFPGTGDLKDIGAGRGKYYAVNCPLRDGMDDDCYERIFKPVVTKV 246

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +ET+ PGA+VLQCGADSL GDRLGCFNLS+ GH +CV F++ F LPLL+ GGGGYT  NV
Sbjct: 247 METFRPGAVVLQCGADSLCGDRLGCFNLSLKGHGKCVEFIRSFPLPLLLVGGGGYTIRNV 306

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ARCWT ET I L TE+PN++P N+Y +YF P+  L I   ++ 
Sbjct: 307 ARCWTNETSIALATEIPNDLPYNDYYEYFGPDFKLHISPSNMA 349


>gi|432884272|ref|XP_004074465.1| PREDICTED: probable histone deacetylase 1-B-like isoform 1 [Oryzias
           latipes]
          Length = 482

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 279/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 246 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKGFNLPLLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHI 345


>gi|19526271|gb|AAL89665.1|AF411956_6 histone deacetylase [Takifugu rubripes]
          Length = 477

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 278/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANGEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSVGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD  +PNE+P N+Y +YF P+  L I
Sbjct: 307 RNVARCWTYETAVALDASIPNELPYNDYFEYFGPDFKLHI 346


>gi|410897953|ref|XP_003962463.1| PREDICTED: histone deacetylase 1-like [Takifugu rubripes]
          Length = 484

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 278/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANGEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSVGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 247 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD  +PNE+P N+Y +YF P+  L I
Sbjct: 307 RNVARCWTYETAVALDASIPNELPYNDYFEYFGPDFKLHI 346


>gi|53749670|ref|NP_001005432.1| histone deacetylase 2 [Xenopus (Silurana) tropicalis]
 gi|49257716|gb|AAH74509.1| histone deacetylase 2 [Xenopus (Silurana) tropicalis]
          Length = 488

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/346 (62%), Positives = 281/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   AKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNR 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK II
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT 
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|89268122|emb|CAJ81536.1| histone deacetylase 2 [Xenopus (Silurana) tropicalis]
          Length = 488

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/346 (62%), Positives = 281/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   AKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNR 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK II
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT 
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|321463880|gb|EFX74892.1| putative histone deacetylase Rpd3 protein [Daphnia pulex]
          Length = 538

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/346 (62%), Positives = 279/346 (80%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   SRKRVCYYYDSDIGNFYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN 
Sbjct: 68  FHSDDYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +IA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QATEIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I+
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFVPIM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ETY P A+VLQCGADSL+GDRLGCFNL++ GHA+CV FVKK NLPLL+ GGGGYT 
Sbjct: 247 SKVMETYQPSAVVLQCGADSLSGDRLGCFNLTLKGHAKCVDFVKKHNLPLLLLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + L  ++ NE+P N+Y +YF P+  L I   ++ 
Sbjct: 307 RNVARCWTYETAVALGNDIANELPYNDYFEYFGPDFKLHISPSNMA 352


>gi|327261622|ref|XP_003215628.1| PREDICTED: histone deacetylase 2-like [Anolis carolinensis]
          Length = 488

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|410335987|gb|JAA36940.1| histone deacetylase 2 [Pan troglodytes]
          Length = 504

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|242786692|ref|XP_002480855.1| histone deacetylase RpdA/Rpd3 [Talaromyces stipitatus ATCC 10500]
 gi|218721002|gb|EED20421.1| histone deacetylase RpdA/Rpd3 [Talaromyces stipitatus ATCC 10500]
          Length = 672

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 210/337 (62%), Positives = 268/337 (79%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 21  KVAYFYDSDVGNYAYVSGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPASRFEMTQFHT 80

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFL ++TPD   ++ +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 81  DEYIEFLSKVTPDNMEIYAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 140

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 141 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 200

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG+++++G   GK+YA+N PL+DGIDD S+  +F+ +IS V
Sbjct: 201 TDRVMTVSFHKYGE-YFPGTGELRDVGVGSGKYYAVNFPLRDGIDDISYKSIFEPVISNV 259

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP LV GGGGYT  NV
Sbjct: 260 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTLVVGGGGYTMRNV 319

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETGILL+ +L  ++P N+Y +YF+P+  L +
Sbjct: 320 ARTWAFETGILLNEQLDPQLPYNDYYEYFSPDYELDV 356


>gi|330790092|ref|XP_003283132.1| hypothetical protein DICPUDRAFT_85725 [Dictyostelium purpureum]
 gi|325086999|gb|EGC40381.1| hypothetical protein DICPUDRAFT_85725 [Dictyostelium purpureum]
          Length = 423

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/353 (61%), Positives = 281/353 (79%), Gaps = 1/353 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+ YF+D DVG+ ++GP HPMKPHRLC+T++LVL+Y LHKKM +Y+  +A   +  +
Sbjct: 11  SKTKVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARRADSEDFLR 70

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DYV+FL R++PD    ++ +L+++++GEDCPVF  L+++C IY GG+I+ A +LN+
Sbjct: 71  FHSDDYVDFLERVSPDNLSEWK-DLSRFHIGEDCPVFPGLYDYCSIYTGGSIEGALKLNH 129

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           ++ DIAINW+GGLHHA+K EASGFCY+ND+VLGILELLK+H RVLYIDIDVHHGDGV+EA
Sbjct: 130 RMYDIAINWSGGLHHARKDEASGFCYVNDIVLGILELLKFHPRVLYIDIDVHHGDGVQEA 189

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFG  FFPGTGD+ EIG   GK Y++NVPL DGIDD S+  +FK +I
Sbjct: 190 FYLTDRVMTVSFHKFGGDFFPGTGDIDEIGMHAGKQYSVNVPLHDGIDDRSYLSIFKPVI 249

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P AIVLQCGADSL  DRLGCFNL+I+GHAECVRFVK FN+P +V GGGGYT 
Sbjct: 250 QGVMDYYRPSAIVLQCGADSLRFDRLGCFNLTINGHAECVRFVKSFNVPTMVLGGGGYTV 309

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCSFKEID 355
            NVARCWT ET + +DTE+ NE+P N+YI++++P+  L     HI   F+  +
Sbjct: 310 RNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQLIPDYSHIPYKFENAN 362


>gi|326933089|ref|XP_003212642.1| PREDICTED: histone deacetylase 1-like [Meleagris gallopavo]
          Length = 451

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 209/323 (64%), Positives = 267/323 (82%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK +ISKV+ET+ P A+VLQCG+DSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+
Sbjct: 240 DRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|344264495|ref|XP_003404327.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 2-like
           [Loxodonta africana]
          Length = 488

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|348561437|ref|XP_003466519.1| PREDICTED: histone deacetylase 2-like [Cavia porcellus]
          Length = 552

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 73  KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 132

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 133 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 192

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 193 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 252

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 253 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 311

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 312 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 371

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 372 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 416


>gi|224048285|ref|XP_002192530.1| PREDICTED: histone deacetylase 2 [Taeniopygia guttata]
          Length = 488

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|391869327|gb|EIT78526.1| histone deacetylase RpdA/Rpd3 [Aspergillus oryzae 3.042]
          Length = 685

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 209/337 (62%), Positives = 267/337 (79%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 20  KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 79

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 80  DEYIDFLSKVTPDNMDTYAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 139

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 140 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 199

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG  +GK+YA+N PL+DGIDD S+  +F+ +I  V
Sbjct: 200 TDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIKSV 258

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV F+K FNLP L+ GGGGYT  NV
Sbjct: 259 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFIKSFNLPTLILGGGGYTMRNV 318

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETGIL+   L +E+P N+Y +YFAP+  L +
Sbjct: 319 ARTWAFETGILVGDPLGSELPYNDYYEYFAPDYELDV 355


>gi|326927674|ref|XP_003210016.1| PREDICTED: histone deacetylase 3-like [Meleagris gallopavo]
          Length = 428

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 216/365 (59%), Positives = 279/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L+D  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|387016366|gb|AFJ50302.1| Histone deacetylase 2-like [Crotalus adamanteus]
          Length = 488

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|238499643|ref|XP_002381056.1| histone deacetylase RpdA/Rpd3 [Aspergillus flavus NRRL3357]
 gi|317150381|ref|XP_003190418.1| histone deacetylase 1 [Aspergillus oryzae RIB40]
 gi|220692809|gb|EED49155.1| histone deacetylase RpdA/Rpd3 [Aspergillus flavus NRRL3357]
 gi|409924406|dbj|BAM63313.1| class1 histone deacetylase RpdA [Aspergillus oryzae]
          Length = 685

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 209/337 (62%), Positives = 267/337 (79%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 20  KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 79

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 80  DEYIDFLSKVTPDNMDTYAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 139

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 140 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 199

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG  +GK+YA+N PL+DGIDD S+  +F+ +I  V
Sbjct: 200 TDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIKSV 258

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV F+K FNLP L+ GGGGYT  NV
Sbjct: 259 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFIKSFNLPTLILGGGGYTMRNV 318

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETGIL+   L +E+P N+Y +YFAP+  L +
Sbjct: 319 ARTWAFETGILVGDPLGSELPYNDYYEYFAPDYELDV 355


>gi|301774829|ref|XP_002922834.1| PREDICTED: histone deacetylase 2-like [Ailuropoda melanoleuca]
          Length = 488

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|209877422|ref|XP_002140153.1| RPD3/HD1 histone deacetylase [Cryptosporidium muris RN66]
 gi|209555759|gb|EEA05804.1| RPD3/HD1 histone deacetylase, putative [Cryptosporidium muris RN66]
          Length = 434

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/345 (65%), Positives = 269/345 (77%), Gaps = 5/345 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +  ++SYFYDGD+GS Y+GP HPMKP R+ M H L+LSYDL+K MEIYRPHK+   EL  
Sbjct: 2   TNQRVSYFYDGDIGSYYYGPGHPMKPQRIRMAHSLILSYDLYKHMEIYRPHKSSERELVD 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRL 120
           FH  DYVEFL  I+PD    F  +L ++NLGE  DCPVF+ LFEF QI AGG++D A +L
Sbjct: 62  FHEEDYVEFLSSISPDNCKDFGLQLKRFNLGESTDCPVFDGLFEFQQICAGGSLDGAYKL 121

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN   DI INW+GGLHHAK+ EASGFCYIND+VL ILELLKYHARV+YIDIDVHHGDGVE
Sbjct: 122 NNNQSDICINWSGGLHHAKRSEASGFCYINDIVLAILELLKYHARVMYIDIDVHHGDGVE 181

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T RV+TVSFHKFG+ +FPGTGDV +IG  +GK+Y++N+PL DGIDD SF  +F+ 
Sbjct: 182 EAFYVTHRVLTVSFHKFGE-YFPGTGDVTDIGAAQGKYYSVNIPLNDGIDDQSFLNIFEP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISK +E Y PGAIVLQCGADS+ GDRLG FNLSI GHA CV F  KFN+P+LV GGGGY
Sbjct: 241 IISKCIEVYRPGAIVLQCGADSVRGDRLGRFNLSIRGHAACVDFCMKFNIPMLVLGGGGY 300

Query: 301 TKENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRIP 343
           T  NVARCW  ET ++L    ++ ++IP N+Y  YFAP+  L IP
Sbjct: 301 TIRNVARCWAYETAVILGRTDQVSDDIPLNDYYDYFAPDFKLHIP 345


>gi|126310452|ref|XP_001368989.1| PREDICTED: histone deacetylase 2-like [Monodelphis domestica]
          Length = 488

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|426234509|ref|XP_004011238.1| PREDICTED: histone deacetylase 2 [Ovis aries]
          Length = 488

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|402868496|ref|XP_003898337.1| PREDICTED: histone deacetylase 2 isoform 1 [Papio anubis]
 gi|380785055|gb|AFE64403.1| histone deacetylase 2 [Macaca mulatta]
 gi|383411631|gb|AFH29029.1| histone deacetylase 2 [Macaca mulatta]
 gi|384943146|gb|AFI35178.1| histone deacetylase 2 [Macaca mulatta]
 gi|384943148|gb|AFI35179.1| histone deacetylase 2 [Macaca mulatta]
          Length = 488

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|115495423|ref|NP_001068614.1| histone deacetylase 2 [Bos taurus]
 gi|111305328|gb|AAI20420.1| Histone deacetylase 2 [Bos taurus]
          Length = 488

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|293336691|ref|NP_001518.3| histone deacetylase 2 [Homo sapiens]
 gi|426354306|ref|XP_004044607.1| PREDICTED: histone deacetylase 2 isoform 1 [Gorilla gorilla
           gorilla]
 gi|68068066|sp|Q92769.2|HDAC2_HUMAN RecName: Full=Histone deacetylase 2; Short=HD2
 gi|119568639|gb|EAW48254.1| histone deacetylase 2, isoform CRA_b [Homo sapiens]
 gi|119568640|gb|EAW48255.1| histone deacetylase 2, isoform CRA_b [Homo sapiens]
 gi|410212026|gb|JAA03232.1| histone deacetylase 2 [Pan troglodytes]
 gi|410260544|gb|JAA18238.1| histone deacetylase 2 [Pan troglodytes]
 gi|410291912|gb|JAA24556.1| histone deacetylase 2 [Pan troglodytes]
          Length = 488

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|335279374|ref|XP_001925353.2| PREDICTED: histone deacetylase 2-like [Sus scrofa]
          Length = 488

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|149726250|ref|XP_001504028.1| PREDICTED: histone deacetylase 3-like [Equus caballus]
          Length = 428

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/365 (59%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           E Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 EFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|47213589|emb|CAF93492.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 490

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/335 (64%), Positives = 278/335 (82%), Gaps = 1/335 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 9   TKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    F +++ ++N+GEDCPVF+ LFEFCQ+ AGG+   + +LN 
Sbjct: 69  YHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSAAGSVKLNR 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 129 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 189 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEHIFKPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 248 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLMLGGGGYTI 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPE 337
            NVARCWT ET + LDT++P+E+P N+Y +YF P+
Sbjct: 308 RNVARCWTYETAVALDTDIPDELPYNDYFEYFGPD 342


>gi|1666637|emb|CAA70455.1| histone deacetylase [Drosophila melanogaster]
          Length = 520

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 210/340 (61%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KM+I RPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMDI-RPHKATADEMTK 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH  +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 64  FHCDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 123

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 124 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 183

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct: 184 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 242

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct: 243 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 302

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             V+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 303 RKVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 342


>gi|431838729|gb|ELK00659.1| Histone deacetylase 2 [Pteropus alecto]
          Length = 479

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|348512569|ref|XP_003443815.1| PREDICTED: probable histone deacetylase 1-B-like [Oreochromis
           niloticus]
          Length = 482

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/340 (64%), Positives = 278/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 246 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKTFNLPLLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD  +PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDCSIPNELPYNDYFEYFGPDFKLHI 345


>gi|87162464|ref|NP_032255.2| histone deacetylase 2 [Mus musculus]
 gi|148672950|gb|EDL04897.1| histone deacetylase 2 [Mus musculus]
 gi|187951079|gb|AAI38518.1| Histone deacetylase 2 [Mus musculus]
          Length = 488

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|449670774|ref|XP_002162003.2| PREDICTED: histone deacetylase 3-like [Hydra magnipapillata]
          Length = 428

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/339 (62%), Positives = 275/339 (81%), Gaps = 1/339 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+++I+YFYD DVG+ ++G +HPMKPHRL +TH+LV SY+LHKKM ++RP  A P ++ +
Sbjct: 2   SQNRIAYFYDPDVGNYHYGSSHPMKPHRLALTHNLVFSYNLHKKMNVFRPSHATPHDMTR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS++Y+ FL R+TP  +  F   L K+++G+D P+F  LF+FC  Y G ++  A +LN+
Sbjct: 62  FHSSEYIHFLQRVTPSNKAGFISSLNKFSVGDDSPIFPGLFDFCSAYTGASLQGAVKLNH 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            LCDIAINW+GGLHHAKK EASGFCY+ND+VL ILELLKYHARVLYIDID+HHGDGV+EA
Sbjct: 122 GLCDIAINWSGGLHHAKKFEASGFCYVNDIVLAILELLKYHARVLYIDIDIHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTG++ E+GE +G++Y++N+PLKDGIDD S+  LFK II
Sbjct: 182 FYLTDRVMTVSFHKYGNFFFPGTGEMYEVGEDDGRYYSLNIPLKDGIDDQSYISLFKPII 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E Y P AIVLQCGADSLA DRLGCF+L+I GH ECV++VK F +PLLV GGGGYT 
Sbjct: 242 QAVIEKYVPSAIVLQCGADSLALDRLGCFSLNIKGHGECVQYVKSFGIPLLVLGGGGYTI 301

Query: 303 ENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSL 340
            NVARCWT ET +LLD  +  +IP +++Y ++F+P+ SL
Sbjct: 302 RNVARCWTYETFLLLDEPVDEQIPMKSDYAEFFSPDYSL 340


>gi|209154690|gb|ACI33577.1| Histone deacetylase 2 [Salmo salar]
          Length = 468

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/346 (62%), Positives = 281/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 9   TKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEITK 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG+   + +LN 
Sbjct: 69  YHSDDYIQFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSAAGSVKLNR 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 129 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DG+DD S+  +FK ++
Sbjct: 189 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGVDDESYELIFKPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct: 248 AKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLMLGGGGYTI 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LDTE+P+E+P N+Y +YF P+  L I   ++ 
Sbjct: 308 RNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMT 353


>gi|321470930|gb|EFX81904.1| putative histone deacetylase HDAC3 protein [Daphnia pulex]
          Length = 434

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/334 (63%), Positives = 270/334 (80%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SYF+D DVG+ ++GP HPMKP RL +TH LVL Y ++KKM++YRP++A   ++ +FHS 
Sbjct: 9   VSYFHDQDVGNFHYGPLHPMKPQRLAVTHSLVLHYGMYKKMQVYRPYRASAHDMCRFHSE 68

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY+EFL R++P     F + L ++N+G+DCPVF+ LF+FC +Y G +++ A +LN+   D
Sbjct: 69  DYIEFLQRVSPQNIQAFSKCLGQFNVGDDCPVFDGLFDFCSMYTGASLEGATKLNHGSTD 128

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 129 IAINWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 188

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++N+PLK+GIDD S+ ++FK +I  V+
Sbjct: 189 DRVMTVSFHKYGNYFFPGTGDMYEIGAECGRYYSVNIPLKEGIDDQSYLQVFKPVIQYVM 248

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           E Y P AIVLQCGADSLA DRLGCFNLS  GH ECV+FVK FN+PLLV GGGGYT  NVA
Sbjct: 249 EFYQPTAIVLQCGADSLANDRLGCFNLSTKGHGECVKFVKDFNVPLLVLGGGGYTLRNVA 308

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           RCWT ET +L+D  + NE+P NEY +YFAP+ SL
Sbjct: 309 RCWTYETSLLVDEGISNELPYNEYFEYFAPDFSL 342


>gi|208022663|ref|NP_445899.1| histone deacetylase 2 [Rattus norvegicus]
 gi|149032950|gb|EDL87791.1| histone deacetylase 2 [Rattus norvegicus]
          Length = 488

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 216/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL +LELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAVLELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|60654411|gb|AAX29896.1| histone deacetylase 2 [synthetic construct]
          Length = 489

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTHETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|193693028|ref|XP_001951271.1| PREDICTED: histone deacetylase 3-like [Acyrthosiphon pisum]
          Length = 433

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 210/335 (62%), Positives = 266/335 (79%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++ YFY+ DVG+ ++GP HPMKPHRL + H LVL+Y L+ KM+IYRP++A   ++ +
Sbjct: 2   SNKRVFYFYNPDVGNFHYGPAHPMKPHRLSVIHSLVLNYGLYNKMKIYRPYRASAHDMCR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH  +Y+EFL R+TP     + + L  +N+GEDCPVFE L++FC +Y G ++D A +LN 
Sbjct: 62  FHHDEYIEFLQRVTPQNLTTYSKYLNHFNVGEDCPVFEGLYDFCSMYTGASLDGAMKLNK 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDIDVHHGDGV+EA
Sbjct: 122 NCCDIAINWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDVHHGDGVQEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S++++FK +I
Sbjct: 182 FYLTDRVMTVSFHKYGNWFFPGTGDMYEIGADVGRYYSVNVPLKEGIDDFSYSQVFKPVI 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P AIVLQCGADSL GDRLGCFNLS  GH ECV+F+K  N+PLL  GGGGYT 
Sbjct: 242 QHVMDLYQPTAIVLQCGADSLNGDRLGCFNLSTKGHGECVKFIKDLNVPLLTVGGGGYTL 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPE 337
            NVARCWT ET +L+D E+ N IPE+EY  YFAP+
Sbjct: 302 RNVARCWTYETSLLIDEEISNTIPEHEYRDYFAPD 336


>gi|327270313|ref|XP_003219934.1| PREDICTED: histone deacetylase 3-like [Anolis carolinensis]
          Length = 428

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 216/365 (59%), Positives = 279/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           E Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK F++PLLV GGGGYT  NVA
Sbjct: 245 EFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFSIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L+D  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|281211234|gb|EFA85400.1| histone deacetylase family protein [Polysphondylium pallidum PN500]
          Length = 421

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 210/338 (62%), Positives = 277/338 (81%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+ YF+D D+G+ ++G  HPMKPHRLC+T+ LVL+Y LHKKM++Y+  +A   +L +
Sbjct: 20  SKTKVCYFHDHDIGNYFYGIYHPMKPHRLCLTNSLVLNYGLHKKMDVYKARRADKQDLLK 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y++FL R+TP T + ++  + ++++GEDCPVF  L+++CQ+Y GG+I+ A +LN+
Sbjct: 80  FHSPEYIDFLERVTPGTLNDYKDAVKQFHIGEDCPVFPGLYDYCQVYTGGSIEGAIKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           ++ DIAINW+GGLHHA+K EASGFCYIND+VLGI+ELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 140 KMYDIAINWSGGLHHARKDEASGFCYINDIVLGIIELLKYHPRVLYIDIDIHHGDGVQEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD  EIG R+GK Y++NVPL+DGIDD S+  +FK +I
Sbjct: 200 FYLTDRVMTVSFHKYGNDFFPGTGDWDEIGVRKGKQYSVNVPLRDGIDDRSYQSIFKPVI 259

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCGADSL  DRLGCFNL+  GHAECV+FVK F LP +V GGGGYT 
Sbjct: 260 QGVMDYYKPSAVVLQCGADSLRFDRLGCFNLTFKGHAECVKFVKSFGLPTMVLGGGGYTV 319

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCWT ET +LLDTE+ NE+P N+YI++++P+  L
Sbjct: 320 RNVARCWTYETSVLLDTEIKNELPFNDYIQFYSPDFQL 357


>gi|296484177|tpg|DAA26292.1| TPA: histone deacetylase 2 [Bos taurus]
          Length = 458

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|148222828|ref|NP_001081491.1| probable histone deacetylase 1-A [Xenopus laevis]
 gi|3023937|sp|Q91695.1|HDA1A_XENLA RecName: Full=Probable histone deacetylase 1-A; Short=HD1-A;
           AltName: Full=AB21; AltName: Full=HDM; AltName:
           Full=Maternally-expressed histone deacetylase
 gi|602098|emb|CAA55211.1| yeast RPD3 homologue [Xenopus laevis]
 gi|51704120|gb|AAH81136.1| AB21 protein [Xenopus laevis]
          Length = 480

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 214/346 (61%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEI+RPHKA   ++ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAEDMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N  L+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYALRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLPLL+ GGGGYT 
Sbjct: 246 SKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NVARCWT ET + LD+E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMT 351


>gi|10716830|gb|AAG21919.1|AF139991_1 histone deacetylase [Cryptosporidium parvum]
          Length = 444

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/342 (66%), Positives = 266/342 (77%), Gaps = 5/342 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYDGD+GS Y+GP HPMKP R+ M H+L+LSYDL+K MEIY+PHK+   EL  FH 
Sbjct: 4   RVSYFYDGDIGSYYYGPGHPMKPQRIRMAHNLILSYDLYKHMEIYKPHKSPQSELVYFHE 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY+ FL  I PD    F  +L ++NLGE  DCPVF+ LFEF QI AGG+ID A +LNN+
Sbjct: 64  EDYINFLSSINPDNSKDFGLQLKRFNLGETTDCPVFDGLFEFQQICAGGSIDGAYKLNNE 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INW+GGLHHAK+ EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QSDICINWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y + RV+TVSFHKFG+ FFPGTGD+ +IG  +GK+Y++NVPL DGIDD SF  LFK IIS
Sbjct: 184 YLSHRVLTVSFHKFGE-FFPGTGDITDIGVAQGKYYSVNVPLNDGIDDDSFLSLFKPIIS 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K +E Y PGAIVLQCGADS+ GDRLG FNLSI GHAECV F K FN+PLL+ GGGGYT  
Sbjct: 243 KCIEVYRPGAIVLQCGADSVRGDRLGRFNLSIKGHAECVEFCKIFNIPLLILGGGGYTIR 302

Query: 304 NVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIP 343
           NVAR W  ET  +LD    + + IP  +Y  YFAP+  L IP
Sbjct: 303 NVARTWAYETATILDRTDLISDNIPLYDYYDYFAPDFKLHIP 344


>gi|417411607|gb|JAA52234.1| Putative histone deacetylase complex catalytic component rpd3,
           partial [Desmodus rotundus]
          Length = 556

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/339 (64%), Positives = 278/339 (82%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 77  KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 136

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 137 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 196

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 197 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 256

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 257 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 315

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 316 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 375

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I
Sbjct: 376 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHI 414


>gi|308800586|ref|XP_003075074.1| Hda2 histone deacetylase (IC) [Ostreococcus tauri]
 gi|119358878|emb|CAL52346.2| Hda2 histone deacetylase (IC) [Ostreococcus tauri]
          Length = 482

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/344 (61%), Positives = 273/344 (79%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K KI+YFYD +VG+ Y+G  HPMKPHR+ MTH+L+L YD++K ME+++P  A   ++ QF
Sbjct: 2   KKKIAYFYDQEVGNFYYGQGHPMKPHRMRMTHNLLLHYDMYKDMEVFQPTPAQAEDMTQF 61

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL  +TPD QH   ++L ++N+ EDCPVF+ LF FCQ+Y GG++  A RLN+ 
Sbjct: 62  HSDDYIDFLRLVTPDNQHEHMRQLKRFNVAEDCPVFDGLFRFCQLYTGGSVGGAVRLNHG 121

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           L D  INW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVEEAF
Sbjct: 122 LSDTVINWSGGLHHAKKSEASGFCYVNDIVLAILELLKEHQRVLYIDIDIHHGDGVEEAF 181

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFG+ +FPGTG ++++G+  GK+Y++NVPLKDGIDD S+  L+K ++S
Sbjct: 182 YTTDRVMTVSFHKFGE-YFPGTGHLQDVGQHAGKYYSMNVPLKDGIDDESYELLYKPLMS 240

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P AIV Q GADSL+GDRLGCFNLSI GHAEC++++  FN+PLLV GGGGYT  
Sbjct: 241 KVMEVYQPDAIVFQSGADSLSGDRLGCFNLSIKGHAECLKYMTSFNVPLLVLGGGGYTIR 300

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVARCW  ETG LL+ +L + +P+N+Y +YF P  +L I   ++
Sbjct: 301 NVARCWAYETGCLLERDLADCMPQNDYSEYFGPTHTLHIQTSNM 344


>gi|448111112|ref|XP_004201762.1| Piso0_001963 [Millerozyma farinosa CBS 7064]
 gi|359464751|emb|CCE88456.1| Piso0_001963 [Millerozyma farinosa CBS 7064]
          Length = 491

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 212/358 (59%), Positives = 281/358 (78%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +I+YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  NKKRIAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFLSRVTPDNLDMFAKEQVKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH+RVLY+DIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHSRVLYVDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK+YA+NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYSTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYYAVNVPLRDGIDDATYKSVFQPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK++E Y P  +VLQCG DSL+GDRLGCFNLS+ GHA CV F+K FN+P++V GGGGYT 
Sbjct: 255 SKIMEWYQPSVVVLQCGGDSLSGDRLGCFNLSMAGHANCVSFMKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
            NVAR WT E+ IL + +LP+E+P NEY +Y+ P+  L  R  N +   S + +DK +
Sbjct: 315 RNVARTWTYESSILNNVKLPSELPYNEYYEYYGPDYKLDVRPSNMYNANSPEYLDKIL 372


>gi|295322040|pdb|3MAX|A Chain A, Crystal Structure Of Human Hdac2 Complexed With An
           N-(2-Amin Benzamide
 gi|295322041|pdb|3MAX|B Chain B, Crystal Structure Of Human Hdac2 Complexed With An
           N-(2-Amin Benzamide
 gi|295322042|pdb|3MAX|C Chain C, Crystal Structure Of Human Hdac2 Complexed With An
           N-(2-Amin Benzamide
          Length = 367

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 279/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 1   AKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 60

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 61  YHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNR 120

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 121 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 180

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK II
Sbjct: 181 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 239

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT 
Sbjct: 240 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 299

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I
Sbjct: 300 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHI 339


>gi|32450592|gb|AAH54208.1| Hdac2 protein, partial [Xenopus laevis]
          Length = 447

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 279/340 (82%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   AKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNR 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  D+A+NWAGGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK II
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P A+VLQCG DSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT 
Sbjct: 247 SKVMEMYQPSAVVLQCGPDSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHI 346


>gi|443897234|dbj|GAC74575.1| histone deacetylase complex, catalytic component RPD3 [Pseudozyma
           antarctica T-34]
          Length = 612

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 270/340 (79%), Gaps = 1/340 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + K++Y+YD DVG+  +G  HPMKPHR+ MTH+LV +Y LHKKM+I RP +A   ++ +F
Sbjct: 52  RKKVAYYYDHDVGNFSYGLGHPMKPHRMRMTHNLVTNYGLHKKMDILRPKRATRDQMTRF 111

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +YV+FLHR+TP+T H    E T+Y +GEDCP F+ L+EFC I AGG++ AA RLN+ 
Sbjct: 112 HTDEYVDFLHRVTPETVHELTNEGTRYLIGEDCPAFDGLYEFCSISAGGSLAAATRLNSG 171

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+AINWAGGLHHAKK EASGFCY+ND+VL ILELL+ H RVLYIDID+HHGDGVEEAF
Sbjct: 172 ESDVAINWAGGLHHAKKREASGFCYVNDIVLAILELLRVHLRVLYIDIDIHHGDGVEEAF 231

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHKFGD FFPGTGDV+++G + GK Y +NVPL+DGI DT F  +F+ +IS
Sbjct: 232 YTTDRVMTASFHKFGD-FFPGTGDVRDVGMKRGKNYCVNVPLRDGIGDTEFGNIFRPVIS 290

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            +++ Y PGA+VLQCGADSLAGD+LGCFNLS+ GHA+CV F++ F++PL+  GGGGYT  
Sbjct: 291 HIMDWYRPGAVVLQCGADSLAGDKLGCFNLSMRGHADCVAFMQTFDVPLITLGGGGYTVR 350

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           NVAR WT ETG+L+   L  ++P N+YI+YF PE  L +P
Sbjct: 351 NVARTWTYETGLLVGQRLDEDLPFNDYIQYFGPEYKLEVP 390


>gi|62859851|ref|NP_001016883.1| histone deacetylase 3 [Xenopus (Silurana) tropicalis]
 gi|123907332|sp|Q28DV3.1|HDAC3_XENTR RecName: Full=Histone deacetylase 3; Short=HD3
 gi|89272754|emb|CAJ81493.1| histone deacetylase 3 [Xenopus (Silurana) tropicalis]
          Length = 428

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/365 (58%), Positives = 279/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLY+DID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I +V+
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVI 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV++VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L+D  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|348528718|ref|XP_003451863.1| PREDICTED: histone deacetylase 3-like [Oreochromis niloticus]
          Length = 428

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/367 (58%), Positives = 280/367 (76%), Gaps = 6/367 (1%)

Query: 5   DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
           ++ SYFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P+KA   ++ +FH
Sbjct: 3   NRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62

Query: 65  SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           S DY++FL +++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LN+++
Sbjct: 63  SEDYIDFLQKVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
           CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT  N
Sbjct: 243 VVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTVRN 302

Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFI 358
           VARCWT ET +LLD  + +E+P +EY +YFAP+ +L      RI N +     ++I + +
Sbjct: 303 VARCWTYETSLLLDESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362

Query: 359 LFNKQIL 365
             N ++L
Sbjct: 363 FENLKML 369


>gi|12643653|sp|O88895.1|HDAC3_MOUSE RecName: Full=Histone deacetylase 3; Short=HD3
 gi|3639054|gb|AAC36305.1| histone deacetylase 3 [Mus musculus]
 gi|3676558|gb|AAC67258.1| histone deacetylase 3 [Mus musculus]
          Length = 424

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/365 (59%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|3023934|sp|P70288.1|HDAC2_MOUSE RecName: Full=Histone deacetylase 2; Short=HD2; AltName: Full=YY1
           transcription factor-binding protein
 gi|1667396|gb|AAC52889.1| transcriptional regulator homolog RPD3 [Mus musculus]
          Length = 488

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/345 (62%), Positives = 279/345 (80%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV   K FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|114608973|ref|XP_518700.2| PREDICTED: histone deacetylase 2 isoform 2 [Pan troglodytes]
          Length = 581

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 102 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 161

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 162 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 221

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 222 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 281

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 282 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 340

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 341 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 400

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 401 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 445


>gi|121710450|ref|XP_001272841.1| histone deacetylase RpdA [Aspergillus clavatus NRRL 1]
 gi|119400991|gb|EAW11415.1| histone deacetylase RpdA [Aspergillus clavatus NRRL 1]
          Length = 689

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/343 (62%), Positives = 268/343 (78%), Gaps = 4/343 (1%)

Query: 3   SKD---KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE 59
           SKD   K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E
Sbjct: 15  SKDRGKKVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASRYE 74

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + QFH+ +Y++FL ++TPD    F +E  +YN+G+DCPVF+ LFEFC I AGG+++ A R
Sbjct: 75  MTQFHTDEYIDFLSKVTPDNMDQFAKEQGRYNVGDDCPVFDGLFEFCGISAGGSMEGAAR 134

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN   CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGV
Sbjct: 135 LNRNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGV 194

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+
Sbjct: 195 EEAFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKNYAVNFPLRDGIDDVSYKSIFE 253

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +IS V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP ++ GGGG
Sbjct: 254 PVISSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTMIVGGGG 313

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           YT  NVAR W  ETG+LL   L  E+P N+Y +YFAP+  L +
Sbjct: 314 YTMRNVARTWAFETGVLLGEVLGPELPYNDYYEYFAPDYELNV 356


>gi|119498291|ref|XP_001265903.1| histone deacetylase RpdA [Neosartorya fischeri NRRL 181]
 gi|119414067|gb|EAW24006.1| histone deacetylase RpdA [Neosartorya fischeri NRRL 181]
          Length = 688

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/341 (62%), Positives = 267/341 (78%), Gaps = 2/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           RSK K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ 
Sbjct: 16  RSK-KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKYEMT 74

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y++FL ++TPD    F +E  +YN+G+DCPVF+ LFEFC I AGG+++ A RLN
Sbjct: 75  QFHTDEYIDFLSKVTPDNMDQFSKEQGRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLN 134

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEE
Sbjct: 135 RNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEE 194

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+ +
Sbjct: 195 AFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYAVNFPLRDGIDDISYKSIFEPV 253

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP ++ GGGGYT
Sbjct: 254 IRSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTMILGGGGYT 313

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETGILL   L  E+P N+Y +YFAP+  L +
Sbjct: 314 MRNVARTWAFETGILLGDSLGPELPYNDYYEYFAPDYELDV 354


>gi|303273256|ref|XP_003055989.1| histone deacetylase [Micromonas pusilla CCMP1545]
 gi|226462073|gb|EEH59365.1| histone deacetylase [Micromonas pusilla CCMP1545]
          Length = 531

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/342 (63%), Positives = 272/342 (79%), Gaps = 1/342 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K KISYFYD DVG+ Y+G  HPMKPHR+ MTH+L+L Y ++K+ME++RP  A   ++
Sbjct: 1   MAGKAKISYFYDPDVGNFYYGQGHPMKPHRVRMTHNLLLHYGVYKEMELFRPALASAEDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            QFHS +Y+EFL  ITPD QH   ++L ++N  EDCPVF+ LF FCQIY GG++  A RL
Sbjct: 61  TQFHSDEYIEFLRLITPDNQHEHMRQLKRFNCAEDCPVFDGLFNFCQIYTGGSVGGAVRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++  D  +NWAGGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 121 NHKQTDTVVNWAGGLHHAKKNEASGFCYVNDIVLAILELLKVHQRVLYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHKFG+ +FPGTG +++IG+ +GK Y++NVPLKDGIDD S+  LFK 
Sbjct: 181 EAFYTTDRVMTVSFHKFGE-YFPGTGHLQDIGQHKGKHYSVNVPLKDGIDDESYNMLFKP 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +++KV+E YAP A+V Q GADSL GDRLGCFNLSI GHAEC++++  FN+PLLV GGGGY
Sbjct: 240 VMAKVMEMYAPDAVVFQSGADSLTGDRLGCFNLSIRGHAECLKYMMTFNVPLLVLGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCWT ETG LL  EL +++P N+Y +Y+ P  +L+I
Sbjct: 300 TIRNVARCWTYETGCLLGHELDDKMPVNDYSEYYGPTHTLQI 341


>gi|315051668|ref|XP_003175208.1| histone deacetylase 1 [Arthroderma gypseum CBS 118893]
 gi|311340523|gb|EFQ99725.1| histone deacetylase 1 [Arthroderma gypseum CBS 118893]
          Length = 656

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 209/339 (61%), Positives = 269/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+YA+N PL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKYYAVNFPLRDGIDDVSYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLILGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L+  +LP E+P N+Y +YF+P+  L +
Sbjct: 317 NVARTWAYETGVLVGNQLPTELPYNDYYEYFSPDYELDV 355


>gi|71051977|gb|AAH31055.2| HDAC2 protein, partial [Homo sapiens]
          Length = 571

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 92  KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 151

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 152 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 211

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 212 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 271

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 272 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 330

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 331 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 390

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 391 NVARCWTHETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 435


>gi|89257352|ref|NP_034541.2| histone deacetylase 3 [Mus musculus]
 gi|81885290|sp|Q6P6W3.1|HDAC3_RAT RecName: Full=Histone deacetylase 3; Short=HD3
 gi|38541400|gb|AAH61988.1| Hdac3 protein [Rattus norvegicus]
 gi|74203172|dbj|BAE26265.1| unnamed protein product [Mus musculus]
 gi|148678163|gb|EDL10110.1| histone deacetylase 3, isoform CRA_a [Mus musculus]
 gi|149017364|gb|EDL76415.1| histone deacetylase 3, isoform CRA_c [Rattus norvegicus]
 gi|149017368|gb|EDL76419.1| histone deacetylase 3, isoform CRA_c [Rattus norvegicus]
 gi|223460026|gb|AAI39302.1| Histone deacetylase 3 [Mus musculus]
 gi|223460432|gb|AAI39301.1| Histone deacetylase 3 [Mus musculus]
          Length = 428

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/365 (59%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|171846760|gb|AAI61939.1| Hdac2 protein [Rattus norvegicus]
          Length = 546

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 67  KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 126

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 127 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 186

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL +LELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 187 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAVLELLKYHQRVLYIDIDIHHGDGVEEAF 246

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 247 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 305

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 306 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 365

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 366 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 410


>gi|16758192|ref|NP_445900.1| histone deacetylase 3 [Rattus norvegicus]
 gi|12963264|gb|AAK11184.1|AF321131_1 histone deacetylase 3 [Rattus norvegicus]
          Length = 428

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/365 (59%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPXCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|148922187|gb|AAI46377.1| Histone deacetylase 2 [synthetic construct]
 gi|151556584|gb|AAI48798.1| Histone deacetylase 2 [synthetic construct]
          Length = 582

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 103 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 162

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 163 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 222

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 223 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 282

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 283 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 341

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 342 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 401

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 402 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 446


>gi|255732828|ref|XP_002551337.1| histone deacetylase RPD3 [Candida tropicalis MYA-3404]
 gi|240131078|gb|EER30639.1| histone deacetylase RPD3 [Candida tropicalis MYA-3404]
          Length = 615

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 208/340 (61%), Positives = 272/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++F+ R+ PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++A+NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHAVNVPLRDGIDDATYKSVFEPLI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +K++E Y P AIVLQCG DSL+GDRLGCFNLS++GHA CV FVK FN+PL+V GGGGYT 
Sbjct: 255 TKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCVNFVKSFNIPLMVLGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  E+G+L + +LPNE+P NEY +Y+ P+  L +
Sbjct: 315 RNVARTWAYESGLLNNVKLPNELPYNEYYEYYGPDYKLDV 354


>gi|357124023|ref|XP_003563706.1| PREDICTED: probable histone deacetylase 19-like [Brachypodium
           distachyon]
          Length = 521

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ +PH A   +L +
Sbjct: 20  SKRRVCYFYDSEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDEMQVLKPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD++++G  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+P+L+ GGGGYT 
Sbjct: 258 GKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPVLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPLNEYYEYFGPDYTLHV 357


>gi|225709884|gb|ACO10788.1| Histone deacetylase 1 [Caligus rogercresseyi]
          Length = 475

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/340 (64%), Positives = 277/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ KI Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   SRKKICYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++ +A +LN 
Sbjct: 68  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVASAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QAADIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+   F  II
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDDSYQNTFVPII 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E+Y P AIVLQCGADSL+GDRLGCFNL++ GHA+CV F+KK+NLPL++ GGGGYT 
Sbjct: 247 SKVMESYHPSAIVLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKKYNLPLMLLGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET I L+ E+ NE+P N+Y +YF P+  L I
Sbjct: 307 RNVARCWTYETSIALNVEIANELPYNDYFEYFGPDFKLHI 346


>gi|281345408|gb|EFB20992.1| hypothetical protein PANDA_000349 [Ailuropoda melanoleuca]
          Length = 406

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|159128886|gb|EDP54000.1| histone deacetylase RpdA [Aspergillus fumigatus A1163]
          Length = 688

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/341 (62%), Positives = 267/341 (78%), Gaps = 2/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           RS+ K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ 
Sbjct: 16  RSR-KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKYEMT 74

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y++FL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN
Sbjct: 75  QFHTDEYIDFLSKVTPDNMDQFSKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLN 134

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEE
Sbjct: 135 RNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEE 194

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+ +
Sbjct: 195 AFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYAVNFPLRDGIDDISYKSIFEPV 253

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP ++ GGGGYT
Sbjct: 254 IRSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTMILGGGGYT 313

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETGILL   L  E+P N+Y +YFAP+  L +
Sbjct: 314 MRNVARTWAFETGILLGENLGPELPYNDYYEYFAPDYELDV 354


>gi|326474192|gb|EGD98201.1| histone deacetylase RpdA [Trichophyton tonsurans CBS 112818]
          Length = 656

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 208/339 (61%), Positives = 269/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+Y++N PL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKYYSVNFPLRDGIDDVSYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLILGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L+  +LP E+P N+Y +YF+P+  L +
Sbjct: 317 NVARTWAYETGVLVGNQLPTELPYNDYYEYFSPDYELDV 355


>gi|395504712|ref|XP_003756691.1| PREDICTED: histone deacetylase 3 [Sarcophilus harrisii]
          Length = 428

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|448097083|ref|XP_004198584.1| Piso0_001963 [Millerozyma farinosa CBS 7064]
 gi|359380006|emb|CCE82247.1| Piso0_001963 [Millerozyma farinosa CBS 7064]
          Length = 491

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 211/358 (58%), Positives = 280/358 (78%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +I+YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  NKRRIAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R++PD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFLSRVSPDNLDMFAKEQVKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH+RVLY+DIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHSRVLYVDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK+YA+NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYSTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYYAVNVPLRDGIDDATYKSIFQPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK++E Y P  +VLQCG DSL+GDRLGCFNLS+ GHA CV F+K FN+P++V GGGGYT 
Sbjct: 255 SKIMEWYQPSVVVLQCGGDSLSGDRLGCFNLSMAGHANCVSFMKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
            NVAR WT E+ IL + +LP E+P NEY +Y+ P+  L  R  N +   S + +DK +
Sbjct: 315 RNVARTWTYESSILNNVKLPAELPYNEYYEYYGPDYKLDVRPSNMYNANSPEYLDKIL 372


>gi|70989249|ref|XP_749474.1| histone deacetylase RpdA/Rpd3 [Aspergillus fumigatus Af293]
 gi|66847105|gb|EAL87436.1| histone deacetylase RpdA/Rpd3 [Aspergillus fumigatus Af293]
          Length = 688

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/341 (62%), Positives = 267/341 (78%), Gaps = 2/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           RS+ K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ 
Sbjct: 16  RSR-KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKYEMT 74

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y++FL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN
Sbjct: 75  QFHTDEYIDFLSKVTPDNMDQFSKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLN 134

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEE
Sbjct: 135 RNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEE 194

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+ +
Sbjct: 195 AFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYAVNFPLRDGIDDISYKSIFEPV 253

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP ++ GGGGYT
Sbjct: 254 IRSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTMILGGGGYT 313

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETGILL   L  E+P N+Y +YFAP+  L +
Sbjct: 314 MRNVARTWAFETGILLGENLGPELPYNDYYEYFAPDYELDV 354


>gi|332213071|ref|XP_003255642.1| PREDICTED: histone deacetylase 2 isoform 1 [Nomascus leucogenys]
          Length = 579

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 100 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 159

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 160 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 219

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 220 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 279

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 280 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 338

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 339 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 398

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 399 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 443


>gi|371927785|pdb|4A69|A Chain A, Structure Of Hdac3 Bound To Corepressor And Inositol
           Tetraphosphate
 gi|371927786|pdb|4A69|B Chain B, Structure Of Hdac3 Bound To Corepressor And Inositol
           Tetraphosphate
          Length = 376

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|241953743|ref|XP_002419593.1| histone deacetylase, putative [Candida dubliniensis CD36]
 gi|223642933|emb|CAX43188.1| histone deacetylase, putative [Candida dubliniensis CD36]
          Length = 575

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/345 (59%), Positives = 275/345 (79%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++F+ R+ PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++A+NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHAVNVPLRDGIDDATYKSIFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK++E Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ FVK FN+P++V GGGGYT 
Sbjct: 255 SKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINFVKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NVAR W  E+G+L + +LP+E+P NEY +Y+ P+  L + + ++
Sbjct: 315 RNVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNM 359


>gi|328703842|ref|XP_001946595.2| PREDICTED: histone deacetylase Rpd3-like [Acyrthosiphon pisum]
          Length = 491

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 207/339 (61%), Positives = 270/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YD D+ + Y+G +HPMKPHR+ +TH L+L+Y L++KMEIYRPHKA   E+ +F
Sbjct: 7   KRKVCYYYDSDIENYYYGKSHPMKPHRIRLTHDLLLNYGLYRKMEIYRPHKATAEEMTKF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL  + P   + + +E+ ++N+GEDCPVF+ L++F QI AGG++ AA +LN Q
Sbjct: 67  HSDEYIRFLRNVRPGNMNKYIKEMYRFNVGEDCPVFDGLYQFSQISAGGSVAAAVKLNKQ 126

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH R+LYIDIDVHHGDGVEEAF
Sbjct: 127 STDICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRILYIDIDVHHGDGVEEAF 186

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+GD +FPGTG++++IG  +GK+YA+N+PL DG+DD S+  +F  II+
Sbjct: 187 YTTDRVMTVSFHKYGD-YFPGTGELRDIGAGKGKYYAVNIPLGDGMDDDSYESIFVPIIT 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+ET+ P  +VLQCGADSL GDRLGCFNL++ GH +CV FVK++ LPLL+ GGGGYT  
Sbjct: 246 KVMETFQPSVVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKRYGLPLLMVGGGGYTIR 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 306 NVSRCWTYETAVALGVEIANELPNNDYFEYFGPDYKLHI 344


>gi|358368808|dbj|GAA85424.1| histone deacetylase RpdA/Rpd3 [Aspergillus kawachii IFO 4308]
          Length = 686

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/354 (60%), Positives = 272/354 (76%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 21  KVAYFYDSDVGNYAYVSGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 80

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 81  DEYIDFLSKVTPDNMDSFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 140

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 141 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 200

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+ +I  V
Sbjct: 201 TDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYAVNFPLRDGIDDISYKSIFEPVIKSV 259

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP ++ GGGGYT  NV
Sbjct: 260 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTMILGGGGYTMRNV 319

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHIVCSFKE-IDKF 357
           AR W  ETGIL+   L  E+P N+Y +YFAP+  L + P+     + KE +DK 
Sbjct: 320 ARTWAFETGILVGDTLGAELPYNDYYEYFAPDYELDVRPSNMDNANTKEYLDKI 373


>gi|440892173|gb|ELR45488.1| Histone deacetylase 3, partial [Bos grunniens mutus]
          Length = 445

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 22  VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 81

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 82  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 141

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 142 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 201

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 202 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 261

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 262 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 321

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 322 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 381

Query: 361 NKQIL 365
           N ++L
Sbjct: 382 NLKML 386


>gi|324507457|gb|ADY43160.1| Histone deacetylase 1 [Ascaris suum]
          Length = 476

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 211/344 (61%), Positives = 272/344 (79%), Gaps = 3/344 (0%)

Query: 1   MRS--KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPV 58
           MRS  K +I+Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KME+YRP  A   
Sbjct: 3   MRSHGKTRIAYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPQVASFE 62

Query: 59  ELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAAR 118
           E+ ++HS DY+ FL  I PD    + + L ++N+GEDCPVF+ LFEFCQI +GG+I AA 
Sbjct: 63  EMTKYHSDDYMSFLKNIRPDNMAEYNKALQRFNVGEDCPVFDGLFEFCQISSGGSIAAAT 122

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           ++N +  DIAINW GGLHHAKK EASGFCY ND+VL ILELLK+H RVLY+DID+HHGDG
Sbjct: 123 KVNKKQTDIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHQRVLYVDIDIHHGDG 182

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY TDRVMT SFHK+G+ +FPGTGD+++IG   GK YA+N PL+DGIDD ++ R+F
Sbjct: 183 VEEAFYTTDRVMTCSFHKYGE-YFPGTGDLRDIGAGRGKHYAVNCPLRDGIDDETYERVF 241

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + I+ KV+ ++ P AIVLQCGADSL GDRLGCFNL++ GH +C  ++KKFNLP+L+ GGG
Sbjct: 242 QPIMEKVMHSFQPSAIVLQCGADSLTGDRLGCFNLTLRGHGKCAEYLKKFNLPMLMLGGG 301

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           GYT  NVARCW  ET + LDTE+ NE+P N+Y +Y+ P+  L I
Sbjct: 302 GYTIRNVARCWAFETSVALDTEIANELPYNDYFEYYGPDFKLHI 345


>gi|258576079|ref|XP_002542221.1| histone deacetylase RPD3 [Uncinocarpus reesii 1704]
 gi|237902487|gb|EEP76888.1| histone deacetylase RPD3 [Uncinocarpus reesii 1704]
          Length = 630

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 207/339 (61%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A  +E+ QF
Sbjct: 18  KKRVAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPATRLEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    F++E  +YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLSKVTPDNMEGFQKEQQRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   G++YA+NVPL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGRYYAVNVPLRDGIDDISYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK F LP ++ GGGGYT  
Sbjct: 257 NVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKGFGLPTMILGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W+ ETG+L+  +LP E+P N+Y +YF+P+  L +
Sbjct: 317 NVARTWSFETGLLVGDQLPTELPYNDYYEYFSPDYELDV 355


>gi|432880195|ref|XP_004073599.1| PREDICTED: histone deacetylase 3-like [Oryzias latipes]
          Length = 428

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/366 (58%), Positives = 279/366 (76%), Gaps = 6/366 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           + SYFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P+KA   ++ +FHS
Sbjct: 4   RTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHS 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY++FL +++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LN+++C
Sbjct: 64  EDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKIC 123

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY 
Sbjct: 124 DIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFYL 183

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+ +LF+ +I +V
Sbjct: 184 TDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQV 243

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           V+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT  NV
Sbjct: 244 VDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRNV 303

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFIL 359
           ARCWT ET +LL+  + +E+P +EY +YFAP+ +L      RI N +     ++I + + 
Sbjct: 304 ARCWTYETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVF 363

Query: 360 FNKQIL 365
            N ++L
Sbjct: 364 ENLKML 369


>gi|327296283|ref|XP_003232836.1| histone deacetylase RPD3 [Trichophyton rubrum CBS 118892]
 gi|326465147|gb|EGD90600.1| histone deacetylase RPD3 [Trichophyton rubrum CBS 118892]
          Length = 657

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 208/339 (61%), Positives = 269/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+Y++N PL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKYYSVNFPLRDGIDDVSYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLILGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L+  +LP E+P N+Y +YF+P+  L +
Sbjct: 317 NVARTWAYETGVLVGNQLPTELPYNDYYEYFSPDYELDV 355


>gi|66826729|ref|XP_646719.1| histone deacetylase family protein [Dictyostelium discoideum AX4]
 gi|74858241|sp|Q55BW2.1|HDA12_DICDI RecName: Full=Histone deacetylase B; Short=DdHdaB; AltName:
           Full=Type-1 histone deacetylase 2
 gi|60474582|gb|EAL72519.1| histone deacetylase family protein [Dictyostelium discoideum AX4]
          Length = 422

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/342 (62%), Positives = 279/342 (81%), Gaps = 2/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D DVG+ ++GP HPMKPHRLC+T++LVL+Y LHKKM +Y+   A   ++ +
Sbjct: 11  SKTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLK 70

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DYV+FL R+TP+  + ++ ++ ++++GEDCPVF  L+++C IY+GG+I+ A +LN+
Sbjct: 71  FHSEDYVDFLERVTPENINEWK-DVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNH 129

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           ++ DIAINW+GGLHHA+K EASGFCY+ND+VL ILELLK+HARVLYIDIDVHHGDGV+EA
Sbjct: 130 RMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEA 189

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFG  FFPGTGD+ EIG + GK Y++NVPL DGIDD ++  +FK +I
Sbjct: 190 FYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVI 249

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P  IVLQCGADSL  DRLGCFNL+I GHAECVRFVK FN+P LV GGGGYT 
Sbjct: 250 QGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTV 309

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
            NVARCWT ET + +DTE+ NE+P N+YI++++P+  L IP+
Sbjct: 310 RNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQL-IPD 350


>gi|354545606|emb|CCE42334.1| hypothetical protein CPAR2_808830 [Candida parapsilosis]
          Length = 516

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/341 (60%), Positives = 272/341 (79%), Gaps = 1/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
             K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ 
Sbjct: 15  NQKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMC 74

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y++F+ R++PD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN
Sbjct: 75  QFHTDEYIDFISRVSPDNLDMFNKESVKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLN 134

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEE
Sbjct: 135 RGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEE 194

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +
Sbjct: 195 AFYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSIFEPV 253

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           ISK+VE Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ FVK  N+PL+V GGGGYT
Sbjct: 254 ISKIVEWYQPSAIVLQCGGDSLSGDRLGCFNLSMEGHANCINFVKSLNIPLMVLGGGGYT 313

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  E+G+L + +LP E+P NEY +Y+AP  +L +
Sbjct: 314 MRNVARTWAYESGLLNNVKLPAELPYNEYYEYYAPNYTLEV 354


>gi|426229758|ref|XP_004008950.1| PREDICTED: histone deacetylase 3 [Ovis aries]
          Length = 428

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|197099626|ref|NP_001125568.1| histone deacetylase 3 [Pongo abelii]
 gi|75055054|sp|Q5RB76.1|HDAC3_PONAB RecName: Full=Histone deacetylase 3; Short=HD3
 gi|55728482|emb|CAH90984.1| hypothetical protein [Pongo abelii]
          Length = 428

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|13128862|ref|NP_003874.2| histone deacetylase 3 [Homo sapiens]
 gi|329664534|ref|NP_001193172.1| histone deacetylase 3 [Bos taurus]
 gi|345091082|ref|NP_001230756.1| histone deacetylase 3 [Sus scrofa]
 gi|388452548|ref|NP_001253426.1| histone deacetylase 3 [Macaca mulatta]
 gi|73949423|ref|XP_535219.2| PREDICTED: histone deacetylase 3 isoform 1 [Canis lupus familiaris]
 gi|114602414|ref|XP_001151495.1| PREDICTED: histone deacetylase 3 isoform 5 [Pan troglodytes]
 gi|291387520|ref|XP_002710313.1| PREDICTED: histone deacetylase 3-like [Oryctolagus cuniculus]
 gi|296193036|ref|XP_002744331.1| PREDICTED: histone deacetylase 3 [Callithrix jacchus]
 gi|301753485|ref|XP_002912589.1| PREDICTED: histone deacetylase 3-like [Ailuropoda melanoleuca]
 gi|348583126|ref|XP_003477325.1| PREDICTED: histone deacetylase 3-like [Cavia porcellus]
 gi|395817377|ref|XP_003782148.1| PREDICTED: histone deacetylase 3 [Otolemur garnettii]
 gi|397517948|ref|XP_003829165.1| PREDICTED: histone deacetylase 3 [Pan paniscus]
 gi|402872822|ref|XP_003900298.1| PREDICTED: histone deacetylase 3 [Papio anubis]
 gi|403255738|ref|XP_003920568.1| PREDICTED: histone deacetylase 3 [Saimiri boliviensis boliviensis]
 gi|410948365|ref|XP_003980911.1| PREDICTED: histone deacetylase 3 [Felis catus]
 gi|426350330|ref|XP_004042730.1| PREDICTED: histone deacetylase 3 [Gorilla gorilla gorilla]
 gi|3334210|sp|O15379.2|HDAC3_HUMAN RecName: Full=Histone deacetylase 3; Short=HD3; AltName:
           Full=RPD3-2; AltName: Full=SMAP45
 gi|2661172|gb|AAB88241.1| RPD3-2B [Homo sapiens]
 gi|2789656|gb|AAC98927.1| histone deacetylase 3 [Homo sapiens]
 gi|3201676|gb|AAC26509.1| histone deacetylase 3 [Homo sapiens]
 gi|12653663|gb|AAH00614.1| Histone deacetylase 3 [Homo sapiens]
 gi|60655185|gb|AAX32156.1| histone deacetylase 3 [synthetic construct]
 gi|119582319|gb|EAW61915.1| histone deacetylase 3, isoform CRA_a [Homo sapiens]
 gi|119582320|gb|EAW61916.1| histone deacetylase 3, isoform CRA_a [Homo sapiens]
 gi|123982026|gb|ABM82842.1| histone deacetylase 3 [synthetic construct]
 gi|123996851|gb|ABM86027.1| histone deacetylase 3 [synthetic construct]
 gi|208966474|dbj|BAG73251.1| histone deacetylase 3 [synthetic construct]
 gi|351696451|gb|EHA99369.1| Histone deacetylase 3 [Heterocephalus glaber]
 gi|355691693|gb|EHH26878.1| hypothetical protein EGK_16958 [Macaca mulatta]
 gi|380817612|gb|AFE80680.1| histone deacetylase 3 [Macaca mulatta]
 gi|383409721|gb|AFH28074.1| histone deacetylase 3 [Macaca mulatta]
 gi|384950116|gb|AFI38663.1| histone deacetylase 3 [Macaca mulatta]
 gi|410226042|gb|JAA10240.1| histone deacetylase 3 [Pan troglodytes]
 gi|410252468|gb|JAA14201.1| histone deacetylase 3 [Pan troglodytes]
 gi|410290710|gb|JAA23955.1| histone deacetylase 3 [Pan troglodytes]
 gi|410331969|gb|JAA34931.1| histone deacetylase 3 [Pan troglodytes]
 gi|417400779|gb|JAA47313.1| Putative histone deacetylase complex catalytic component rpd3
           [Desmodus rotundus]
 gi|431892539|gb|ELK02972.1| Histone deacetylase 3 [Pteropus alecto]
 gi|444525559|gb|ELV14085.1| Histone deacetylase 3 [Tupaia chinensis]
          Length = 428

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|448520594|ref|XP_003868315.1| Rpd31 histone deacetylase [Candida orthopsilosis Co 90-125]
 gi|380352655|emb|CCG25411.1| Rpd31 histone deacetylase [Candida orthopsilosis]
          Length = 554

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 205/341 (60%), Positives = 272/341 (79%), Gaps = 1/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
             K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ 
Sbjct: 54  NQKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMC 113

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y++F+ R++PD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN
Sbjct: 114 QFHTDEYIDFISRVSPDNLDMFSKESVKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLN 173

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEE
Sbjct: 174 RGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEE 233

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +
Sbjct: 234 AFYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSIFEPV 292

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I+K+VE Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ FVK  N+PL+V GGGGYT
Sbjct: 293 ITKIVEWYQPSAIVLQCGGDSLSGDRLGCFNLSMEGHANCINFVKSLNIPLMVLGGGGYT 352

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  E+G+L + +LP E+P NEY +Y+AP  +L +
Sbjct: 353 MRNVARTWAYESGLLNNVKLPAELPYNEYYEYYAPNYTLEV 393


>gi|145238426|ref|XP_001391860.1| histone deacetylase 1 [Aspergillus niger CBS 513.88]
 gi|134076345|emb|CAK39601.1| unnamed protein product [Aspergillus niger]
 gi|350635842|gb|EHA24203.1| hypothetical protein ASPNIDRAFT_209473 [Aspergillus niger ATCC
           1015]
          Length = 688

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/354 (60%), Positives = 272/354 (76%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 21  KVAYFYDSDVGNYAYVSGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 80

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 81  DEYIDFLSKVTPDNMDSFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 140

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 141 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 200

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+ +I  V
Sbjct: 201 TDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYAVNFPLRDGIDDVSYKSIFEPVIKSV 259

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP ++ GGGGYT  NV
Sbjct: 260 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTMILGGGGYTMRNV 319

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHIVCSFKE-IDKF 357
           AR W  ETGIL+   L  E+P N+Y +YFAP+  L + P+     + KE +DK 
Sbjct: 320 ARTWAFETGILVGDTLGAELPYNDYYEYFAPDYELDVRPSNMDNANTKEYLDKI 373


>gi|293337197|ref|NP_001168837.1| uncharacterized protein LOC100382642 [Zea mays]
 gi|223973289|gb|ACN30832.1| unknown [Zea mays]
          Length = 686

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/354 (60%), Positives = 272/354 (76%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 21  KVAYFYDSDVGNYAYVSGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 80

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 81  DEYIDFLSKVTPDNMDSFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 140

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 141 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 200

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+ +I  V
Sbjct: 201 TDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYAVNFPLRDGIDDISYKSIFEPVIKSV 259

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP ++ GGGGYT  NV
Sbjct: 260 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTMILGGGGYTMRNV 319

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHIVCSFKE-IDKF 357
           AR W  ETGIL+   L  E+P N+Y +YFAP+  L + P+     + KE +DK 
Sbjct: 320 ARTWAFETGILVGDTLGAELPYNDYYEYFAPDYELDVRPSNMDNANTKEYLDKI 373


>gi|46107794|ref|XP_380956.1| hypothetical protein FG00780.1 [Gibberella zeae PH-1]
          Length = 649

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 210/348 (60%), Positives = 269/348 (77%), Gaps = 1/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 18  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDDYIDFLQKVTPDNMDSFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIAINWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 138 QKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFKKRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++ G  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 198 FYTTDRVMTVSFHKYGE-YFPGTGELRDTGIGQGKNYAVNFPLRDGITDASYRSIFQPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS+DGHA CV FVK FNLP LV GGGGYT 
Sbjct: 257 ENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNFVKSFNLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
            NVAR W  ETG+L+  E+   +P NEY +Y+AP+  L + + ++  S
Sbjct: 317 RNVARTWAFETGVLVGKEMDRTLPYNEYYEYYAPDFELNVRSSNMENS 364


>gi|82264195|sp|Q4SFA0.1|HDAC3_TETNG RecName: Full=Histone deacetylase 3; Short=HD3
 gi|47214117|emb|CAG00682.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 428

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/367 (58%), Positives = 280/367 (76%), Gaps = 6/367 (1%)

Query: 5   DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
           ++ SYFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P+KA   ++ +FH
Sbjct: 3   NRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62

Query: 65  SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           S DY++FL +++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LN+++
Sbjct: 63  SEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
           CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT  N
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRN 302

Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFI 358
           VARCWT ET +LL+  + +E+P +EY +YFAP+ +L      RI N +     ++I + +
Sbjct: 303 VARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362

Query: 359 LFNKQIL 365
             N ++L
Sbjct: 363 FENLKML 369


>gi|224068614|ref|XP_002189056.1| PREDICTED: histone deacetylase 3 [Taeniopygia guttata]
          Length = 428

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 277/365 (75%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           + YFYD DV +  +G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VDYFYDPDVANFPYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L+D  + +E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|410911136|ref|XP_003969046.1| PREDICTED: probable histone deacetylase 1-B-like [Takifugu
           rubripes]
          Length = 474

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 277/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L+++MEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRRMEIYRPHKASGEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E Y P AIVLQCGADSL+GDRLGCFNL+I GH +CV ++K FNLPLL+ GGGGYT 
Sbjct: 246 AKVMEMYQPSAIVLQCGADSLSGDRLGCFNLTIKGHGKCVEYMKSFNLPLLMLGGGGYTI 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LD  +PNE+P N+Y +YF P+  L I
Sbjct: 306 RNVARCWTYETAVALDCSIPNELPYNDYFEYFGPDFKLHI 345


>gi|209154022|gb|ACI33243.1| Histone deacetylase 3 [Salmo salar]
          Length = 428

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/368 (57%), Positives = 280/368 (76%), Gaps = 6/368 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
            ++ +YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM++++P+KA   ++ +F
Sbjct: 2   SNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMQVFKPYKASQHDMCRF 61

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL +++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LN++
Sbjct: 62  HSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHK 121

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           +CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAF
Sbjct: 122 ICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAF 181

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+ +LF+ +I 
Sbjct: 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIK 241

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT  
Sbjct: 242 QVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTVR 301

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKF 357
           NVARCWT ET +L+D  + +E+P +EY +YFAP+ +L      RI N +     ++I   
Sbjct: 302 NVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRST 361

Query: 358 ILFNKQIL 365
           +  N ++L
Sbjct: 362 VFENLKML 369


>gi|237834149|ref|XP_002366372.1| histone deacetylase, putative [Toxoplasma gondii ME49]
 gi|66735114|gb|AAY53803.1| histone deacetylase 3 [Toxoplasma gondii]
 gi|211964036|gb|EEA99231.1| histone deacetylase, putative [Toxoplasma gondii ME49]
 gi|221486598|gb|EEE24859.1| histone deacetylase, putative [Toxoplasma gondii GT1]
 gi|221508356|gb|EEE33943.1| histone deacetylase, putative [Toxoplasma gondii VEG]
          Length = 451

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/371 (60%), Positives = 277/371 (74%), Gaps = 10/371 (2%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++YFYD D+GS Y+GP HPMKP R+ M H LVLSYDL+K ME+YRPHK+   EL  F
Sbjct: 7   RKRVAYFYDPDIGSYYYGPGHPMKPQRIRMAHALVLSYDLYKHMEVYRPHKSIEPELCLF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS+DY+ FL  ++P+    F  +L  +N+GE  DCPVF+ LF F Q  AG +IDAA++LN
Sbjct: 67  HSSDYISFLSSVSPENYKEFSLQLKNFNVGEATDCPVFDGLFTFQQACAGASIDAAKKLN 126

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI +NW+GGLHHAK+ EASGFCYIND+VLGILELLKYHARV+YIDID+HHGDGVEE
Sbjct: 127 HHQADICVNWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDIDIHHGDGVEE 186

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY + RVMTVSFHKFGD FFPGTGDV ++G  +GK+YA+NVPL DG+DD SF  LFK +
Sbjct: 187 AFYVSHRVMTVSFHKFGD-FFPGTGDVTDVGASQGKYYAVNVPLNDGMDDDSFVALFKPV 245

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I+K V+ Y PGAIVLQCGADSL GDRLG FNL+I GHA CV FVK  ++PLLV GGGGYT
Sbjct: 246 ITKCVDVYRPGAIVLQCGADSLTGDRLGKFNLTIKGHAACVAFVKSLDIPLLVLGGGGYT 305

Query: 302 KENVARCWTVETGILLD--TELPNEIPENEYIKYFAPECSL-----RIPNGHIVCSFKEI 354
             NVARCW  ETG++LD   E+   +P N+Y  Y+AP+  L      IPN +     ++I
Sbjct: 306 IRNVARCWAYETGVVLDRHREMSPHVPLNDYYDYYAPDFQLHLTPSSIPNSNSPEHLEKI 365

Query: 355 DKFILFNKQIL 365
              +L N   L
Sbjct: 366 KTRVLSNLSYL 376


>gi|114555339|ref|XP_001162233.1| PREDICTED: histone deacetylase 1 isoform 4 [Pan troglodytes]
          Length = 453

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/323 (63%), Positives = 265/323 (82%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+
Sbjct: 240 DRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|426328765|ref|XP_004025420.1| PREDICTED: histone deacetylase 1 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 453

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/323 (63%), Positives = 265/323 (82%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+
Sbjct: 240 DRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|397515946|ref|XP_003828202.1| PREDICTED: histone deacetylase 1 isoform 2 [Pan paniscus]
          Length = 453

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/323 (63%), Positives = 265/323 (82%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+
Sbjct: 240 DRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|281340052|gb|EFB15636.1| hypothetical protein PANDA_011849 [Ailuropoda melanoleuca]
          Length = 551

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/339 (64%), Positives = 278/339 (82%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 102 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 161

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 162 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 221

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 222 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 281

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 282 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 340

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 341 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 400

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I
Sbjct: 401 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHI 439


>gi|2326173|gb|AAC52038.1| histone deacetylase 3 [Homo sapiens]
          Length = 428

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQILQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|338722021|ref|XP_001499986.3| PREDICTED: histone deacetylase 1-like [Equus caballus]
          Length = 453

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 207/317 (65%), Positives = 263/317 (82%), Gaps = 1/317 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK +ISKV+E + P A+VLQCG+DSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMEMFQPSAVVLQCGSDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+
Sbjct: 240 DRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETSVALDTEIPNEL 299

Query: 326 PENEYIKYFAPECSLRI 342
           P N+Y +YF P+  L I
Sbjct: 300 PYNDYFEYFGPDFKLHI 316


>gi|408391209|gb|EKJ70590.1| hypothetical protein FPSE_09235 [Fusarium pseudograminearum CS3096]
          Length = 649

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 210/348 (60%), Positives = 269/348 (77%), Gaps = 1/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 18  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDDYIDFLQKVTPDNMDSFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIAINWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 138 QKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFKKRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++ G  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 198 FYTTDRVMTVSFHKYGE-YFPGTGELRDTGIGQGKNYAVNFPLRDGITDASYRSIFQPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS+DGHA CV FVK FNLP LV GGGGYT 
Sbjct: 257 ENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNFVKSFNLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
            NVAR W  ETG+L+  E+   +P NEY +Y+AP+  L + + ++  S
Sbjct: 317 RNVARTWAFETGVLVGKEMDRTLPYNEYYEYYAPDFELNVRSSNMENS 364


>gi|119188961|ref|XP_001245087.1| hypothetical protein CIMG_04528 [Coccidioides immitis RS]
 gi|303323449|ref|XP_003071716.1| histone deacetylase RPD3, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240111418|gb|EER29571.1| histone deacetylase RPD3, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320035161|gb|EFW17103.1| histone deacetylase RPD3 [Coccidioides posadasii str. Silveira]
 gi|392867989|gb|EAS33713.2| histone deacetylase RPD3 [Coccidioides immitis RS]
          Length = 626

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 270/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A  +E+ QF
Sbjct: 18  KKRVAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPATRLEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    F++E  +YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLSKVTPDNMESFQKEQQRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   G++YA+NVPL+DGI+D S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGRYYAVNVPLRDGINDISYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK F LP ++ GGGGYT  
Sbjct: 257 NVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFGLPTMILGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L+  +LP E+P N+Y +YF+P+  L +
Sbjct: 317 NVARTWAFETGLLVGEQLPTELPYNDYYEYFSPDYELDV 355


>gi|410966695|ref|XP_003989865.1| PREDICTED: histone deacetylase 1 isoform 2 [Felis catus]
          Length = 453

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/323 (63%), Positives = 265/323 (82%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+
Sbjct: 240 DRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|332254588|ref|XP_003276412.1| PREDICTED: histone deacetylase 1 isoform 2 [Nomascus leucogenys]
          Length = 453

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/323 (63%), Positives = 265/323 (82%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+
Sbjct: 240 DRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|395519331|ref|XP_003763804.1| PREDICTED: histone deacetylase 1-like [Sarcophilus harrisii]
          Length = 408

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 206/320 (64%), Positives = 267/320 (83%), Gaps = 1/320 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           +++  + + GDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA+  E+ ++
Sbjct: 38  EERKCFSFSGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAHADEMTKY 97

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q
Sbjct: 98  HSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQ 157

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 158 QTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 217

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++S
Sbjct: 218 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMS 276

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  
Sbjct: 277 KVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIR 336

Query: 304 NVARCWTVETGILLDTELPN 323
           NVARCWT ET + LDTE+PN
Sbjct: 337 NVARCWTYETAVALDTEIPN 356


>gi|255073655|ref|XP_002500502.1| histone deacetylase [Micromonas sp. RCC299]
 gi|226515765|gb|ACO61760.1| histone deacetylase [Micromonas sp. RCC299]
          Length = 508

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/342 (62%), Positives = 270/342 (78%), Gaps = 1/342 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K KISYFYD DVG+ Y+G  HPMKPHR+ MTH+L+L Y ++K+ME++RP  A   ++
Sbjct: 1   MSGKPKISYFYDPDVGNFYYGQGHPMKPHRVRMTHNLLLHYGIYKEMEVFRPALASAEDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +Y+EFL  ITPD QH   ++L ++N  EDCPVF+ LF FCQIY GG++  A RL
Sbjct: 61  TKFHSDEYIEFLRLITPDNQHEHMRQLKRFNCAEDCPVFDGLFNFCQIYTGGSVGGAVRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++  D  +NWAGGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 121 NHKQTDTVVNWAGGLHHAKKNEASGFCYVNDIVLAILELLKVHQRVLYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHKFG+ +FPGTG ++++G+  GK+Y++NVPLKDGIDD ++  LFK 
Sbjct: 181 EAFYTTDRVMTVSFHKFGE-YFPGTGHLQDVGQHRGKYYSVNVPLKDGIDDEAYVALFKP 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +++KV+E Y P A+V Q GADSL GDRLGCFNLSI GH EC+++++ FN+PLLV GGGGY
Sbjct: 240 VMAKVMEMYQPDAVVFQSGADSLTGDRLGCFNLSIRGHGECLKYMQTFNVPLLVLGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCWT ETG LL  +L N++P N+Y +YF P   L+I
Sbjct: 300 TIRNVARCWTYETGCLLGHDLDNKLPVNDYSEYFGPTHELQI 341


>gi|50423769|ref|XP_460469.1| DEHA2F02420p [Debaryomyces hansenii CBS767]
 gi|49656138|emb|CAG88776.1| DEHA2F02420p [Debaryomyces hansenii CBS767]
          Length = 497

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 208/340 (61%), Positives = 271/340 (79%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R++PD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFLSRVSPDNLDMFAKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++AINVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHAINVPLRDGIDDATYKSIFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P AIVLQCG DSL+GDRLGCFNLS+ GHA C+ FVK FN+P++V GGGGYT 
Sbjct: 255 SKVMEWYQPSAIVLQCGGDSLSGDRLGCFNLSMSGHANCINFVKSFNVPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W+ E G+L +  LP+E+P NEY +Y+ P+  L +
Sbjct: 315 RNVARTWSFEAGLLNNVVLPSELPYNEYYEYYGPDYKLDV 354


>gi|342883340|gb|EGU83854.1| hypothetical protein FOXB_05636 [Fusarium oxysporum Fo5176]
          Length = 650

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 209/348 (60%), Positives = 269/348 (77%), Gaps = 1/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 18  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDDYIDFLQKVTPDNMDSFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIAINWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 138 QKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFKKRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++ G  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 198 FYTTDRVMTVSFHKYGE-YFPGTGELRDTGIGQGKNYAVNFPLRDGITDVSYRSIFQPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS+DGHA CV +VK FNLP LV GGGGYT 
Sbjct: 257 ENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNYVKSFNLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
            NVAR W  ETG+L+  E+   +P NEY +Y+AP+  L + + ++  S
Sbjct: 317 RNVARTWAFETGVLVGKEMDRTLPYNEYYEYYAPDFELNVRSSNMENS 364


>gi|401409474|ref|XP_003884185.1| hypothetical protein NCLIV_045860 [Neospora caninum Liverpool]
 gi|325118603|emb|CBZ54154.1| hypothetical protein NCLIV_045860 [Neospora caninum Liverpool]
          Length = 450

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/367 (60%), Positives = 276/367 (75%), Gaps = 10/367 (2%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++YFYD D+GS Y+GP HPMKP R+ M H LVLSYDL+K ME+YRPHK+   EL  F
Sbjct: 7   RKRVAYFYDPDIGSYYYGPGHPMKPQRIRMAHALVLSYDLYKHMEVYRPHKSIEPELCLF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS+DY+ FL  ++P+    F  +L  +N+GE  DCPVF+ LF F Q  AG +IDAA++LN
Sbjct: 67  HSSDYISFLSSVSPENYKEFSLQLKNFNVGEATDCPVFDGLFTFQQACAGASIDAAKKLN 126

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI +NW+GGLHHAK+ EASGFCYIND+VLGILELLKYHARV+YIDID+HHGDGVEE
Sbjct: 127 HHQADICVNWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDIDIHHGDGVEE 186

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY + RVMTVSFHKFGD FFPGTGDV ++G  +GK+YA+NVPL DG+DD SF  LFK +
Sbjct: 187 AFYVSHRVMTVSFHKFGD-FFPGTGDVTDVGASQGKYYAVNVPLNDGMDDDSFVALFKPV 245

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I+K V+ Y PGAIVLQCGADSL GDRLG FNL+I GHA CV FVK  ++PLLV GGGGYT
Sbjct: 246 ITKCVDVYRPGAIVLQCGADSLTGDRLGKFNLTIKGHAACVAFVKSLDIPLLVLGGGGYT 305

Query: 302 KENVARCWTVETGILLD--TELPNEIPENEYIKYFAPECSL-----RIPNGHIVCSFKEI 354
             NVARCW  ETG++LD   E+   +P N+Y  Y+AP+  L      IPN +     ++I
Sbjct: 306 IRNVARCWAYETGVVLDRHREMSPHVPLNDYYDYYAPDFQLHLTPSSIPNSNSPEHLEKI 365

Query: 355 DKFILFN 361
              +L N
Sbjct: 366 KTRVLSN 372


>gi|126290501|ref|XP_001368824.1| PREDICTED: histone deacetylase 3-like [Monodelphis domestica]
          Length = 428

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/365 (58%), Positives = 277/365 (75%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P + Y +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSXYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|156408678|ref|XP_001641983.1| predicted protein [Nematostella vectensis]
 gi|156229124|gb|EDO49920.1| predicted protein [Nematostella vectensis]
          Length = 442

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/339 (64%), Positives = 278/339 (82%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAAMEEITRY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG+I  A +LN Q
Sbjct: 69  HSDDYIKFLKSIRPDNMSDYTKQMQRFNVGEDCPVFDGLYEFCQLSTGGSIAGAVKLNKQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 HTDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG   GK+YA+N PL+DGI+D S+ ++F+ II+
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGRGKYYAVNFPLRDGIEDESYQQIFQPIIT 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSLAGDRLGCFNLS+ GHA+CV FVK FNLPLL+ GGGGYT  
Sbjct: 248 KVIEIYQPNAVVLQCGADSLAGDRLGCFNLSLKGHAKCVEFVKSFNLPLLILGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET + LD+++ NE+P N+Y +YF P+  L I
Sbjct: 308 NVARCWTYETSVALDSDIANELPYNDYFEYFGPDFKLHI 346


>gi|412990326|emb|CCO19644.1| histone deacetylase 1 [Bathycoccus prasinos]
          Length = 458

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 270/340 (79%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK KISYFYD +VG+ Y+G  HPMKPHR+ MTH+L+L Y L+K+ME+  P  A   ++ Q
Sbjct: 4   SKKKISYFYDPEVGNFYYGQGHPMKPHRMRMTHNLLLHYGLYKEMEVL-PELANAEDMTQ 62

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+EFL  ITPD QH   ++L ++N+ EDCPVF+ LF F QIY GG+I  A RLN+
Sbjct: 63  FHSDEYIEFLRMITPDNQHEHMRQLKRFNVAEDCPVFDGLFNFTQIYTGGSIGGAVRLNH 122

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +L D  INWAGGLHHAKK EASGFCY+ND+VL ILELLK H+RVLYIDID+HHGDGVEEA
Sbjct: 123 KLADTVINWAGGLHHAKKAEASGFCYVNDIVLAILELLKVHSRVLYIDIDIHHGDGVEEA 182

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ +FPGTG ++++G+ +GK+Y++NVPLKDGIDD ++  LFK I+
Sbjct: 183 FYTTDRVMTASFHKFGE-YFPGTGHLQDVGQHQGKYYSVNVPLKDGIDDETYDHLFKPIM 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E +AP AIV Q GADSL+GDRLGCFNLSI GHAEC++++  FN+PLLV GGGGYT 
Sbjct: 242 EKIMEVFAPDAIVFQSGADSLSGDRLGCFNLSIRGHAECLKYMSTFNVPLLVLGGGGYTI 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ETG LL  EL + +P N+Y +YF P  +L I
Sbjct: 302 RNVARCWTYETGCLLGRELEDVLPANDYSEYFGPTNTLHI 341


>gi|343427236|emb|CBQ70764.1| probable Hda2-Histone deacetylase [Sporisorium reilianum SRZ2]
          Length = 585

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 210/340 (61%), Positives = 271/340 (79%), Gaps = 1/340 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++Y+YD DVG+  +G  HPMKPHR+ MTH+LV +Y LHKKM+I RP +A   ++ +F
Sbjct: 11  RKRVAYYYDHDVGNFSYGLGHPMKPHRMRMTHNLVTNYGLHKKMDILRPKRATRDQMTRF 70

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +YV+FLHR+TP++ H    E T+Y +GEDCP F+ L+EFC I AGG++ AA RLN+ 
Sbjct: 71  HTDEYVDFLHRVTPESVHELTNEGTRYLIGEDCPAFDGLYEFCSISAGGSLAAASRLNSG 130

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+AINWAGGLHHAKK EASGFCY+ND+VL ILELL+ H RVLYIDID+HHGDGVEEAF
Sbjct: 131 ESDVAINWAGGLHHAKKREASGFCYVNDIVLAILELLRVHLRVLYIDIDIHHGDGVEEAF 190

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHKFGD FFPGTGDV++IG ++GK Y +NVPL+DGI D  F  +F+ +IS
Sbjct: 191 YTTDRVMTASFHKFGD-FFPGTGDVRDIGLKKGKNYCVNVPLRDGIGDLEFGNIFRPVIS 249

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++E Y PGA+VLQCGADSLAGD+LGCFNLS+ GHA+CV F++ F++PL+  GGGGYT  
Sbjct: 250 HIMEWYRPGAVVLQCGADSLAGDKLGCFNLSMRGHAQCVAFMQTFDVPLITLGGGGYTVR 309

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           NVAR WT ETG+L+  +L  ++P N+YI+YF PE  L +P
Sbjct: 310 NVARTWTYETGLLVGQKLDEDLPFNDYIQYFGPEYKLDVP 349


>gi|302927727|ref|XP_003054558.1| hypothetical protein NECHADRAFT_31703 [Nectria haematococca mpVI
           77-13-4]
 gi|256735499|gb|EEU48845.1| hypothetical protein NECHADRAFT_31703 [Nectria haematococca mpVI
           77-13-4]
          Length = 650

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 208/348 (59%), Positives = 269/348 (77%), Gaps = 1/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 18  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDDYIDFLQKVTPDNMDSFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIAINWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEA
Sbjct: 138 QKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFKKRVLYVDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++ G  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 198 FYTTDRVMTVSFHKYGE-YFPGTGELRDTGIGQGKNYAVNFPLRDGITDVSYRSIFQPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ + P A+VLQCG DSL+GDRLGCFNLS+DGHA CV FVK FNLP LV GGGGYT 
Sbjct: 257 ENVMKYFQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNFVKSFNLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
            NVAR W  ETG+L+  E+   +P NEY +Y+AP+  L + + ++  S
Sbjct: 317 RNVARTWAFETGVLVGQEMERTLPYNEYYEYYAPDFELNVRSSNMENS 364


>gi|7108465|gb|AAF36425.1|AF125536_1 histone deacetylase-3 [Mus musculus]
          Length = 428

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 277/365 (75%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILE LKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILEPLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQICQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|126275574|ref|XP_001386874.1| histone deacetylase transcription modifier [Scheffersomyces
           stipitis CBS 6054]
 gi|126212743|gb|EAZ62851.1| histone deacetylase transcription modifier [Scheffersomyces
           stipitis CBS 6054]
          Length = 500

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 206/340 (60%), Positives = 270/340 (79%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+ PD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFLSRVGPDNLDMFAKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK+Y++NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMTASFHKYGE-FFPGTGELRDIGVGKGKYYSVNVPLRDGIDDATYKSVFEPLI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK++E Y P AIVLQCG DSL+GDRLGCFNLS+ GHA C+ FVK FN+P++V GGGGYT 
Sbjct: 255 SKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMAGHANCINFVKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  E+G+L +  LP+E+P NEY +Y+ P+  L +
Sbjct: 315 RNVARTWAFESGLLNNVILPSELPYNEYYEYYGPDYKLDV 354


>gi|47551069|ref|NP_999711.1| histone deacetylase 1 [Strongylocentrotus purpuratus]
 gi|3023930|sp|P56518.1|HDAC1_STRPU RecName: Full=Histone deacetylase 1; Short=HD1
 gi|2654077|gb|AAB87685.1| histone deacetylase [Strongylocentrotus purpuratus]
          Length = 576

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 277/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 6   TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DYV+FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ +GG++  A +LN 
Sbjct: 66  YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+ ++FK I+
Sbjct: 186 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIM 244

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E Y P AI LQCGADSL+GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT 
Sbjct: 245 CKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTI 304

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET   L  E+ NE+P N+Y +YF P+  L I
Sbjct: 305 RNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHI 344


>gi|395534795|ref|XP_003769422.1| PREDICTED: histone deacetylase 2 [Sarcophilus harrisii]
          Length = 484

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 277/340 (81%), Gaps = 1/340 (0%)

Query: 9   YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
           Y++DGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y
Sbjct: 10  YYWDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEY 69

Query: 69  VEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA 128
           ++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A
Sbjct: 70  IKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMA 129

Query: 129 INWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDR 188
           +NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDR
Sbjct: 130 VNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDR 189

Query: 189 VMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVET 248
           VMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E 
Sbjct: 190 VMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEM 248

Query: 249 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARC 308
           Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARC
Sbjct: 249 YQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARC 308

Query: 309 WTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           WT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 309 WTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 348


>gi|238881086|gb|EEQ44724.1| histone deacetylase RPD3 [Candida albicans WO-1]
          Length = 577

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 204/345 (59%), Positives = 275/345 (79%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++F+ R+ PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK++E Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ +VK FN+P++V GGGGYT 
Sbjct: 255 SKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NVAR W  E+G+L + +LP+E+P NEY +Y+ P+  L + + ++
Sbjct: 315 RNVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNM 359


>gi|68472201|ref|XP_719896.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
 gi|68472436|ref|XP_719779.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
 gi|46441612|gb|EAL00908.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
 gi|46441738|gb|EAL01033.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
          Length = 577

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 204/345 (59%), Positives = 275/345 (79%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++F+ R+ PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK++E Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ +VK FN+P++V GGGGYT 
Sbjct: 255 SKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NVAR W  E+G+L + +LP+E+P NEY +Y+ P+  L + + ++
Sbjct: 315 RNVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNM 359


>gi|322696634|gb|EFY88423.1| histone deacetylase RpdA/Rpd3 [Metarhizium acridum CQMa 102]
          Length = 649

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 210/358 (58%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 22  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 81

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 82  FHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 141

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIA+NWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 142 QKCDIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEA 201

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGI D ++  +F+ +I
Sbjct: 202 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGQGKHYAVNFPLRDGITDQTYKSIFEPVI 260

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS+DGHA CV +VK F LP LV GGGGYT 
Sbjct: 261 ESVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNYVKSFGLPTLVLGGGGYTM 320

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
            NVAR W  ETG+L+  E+   +P NEY +Y+AP  E ++R  N     S + +DK  
Sbjct: 321 RNVARTWAYETGVLVGQEMDRTLPYNEYYEYYAPDFELNVRASNMENSNSREYLDKIT 378


>gi|209572887|sp|Q6IRL9.2|HDAC3_XENLA RecName: Full=Histone deacetylase 3; Short=HD3
          Length = 428

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 208/334 (62%), Positives = 265/334 (79%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A  LNN+ CD
Sbjct: 65  DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I +V+
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVI 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV++VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           RCWT ET +L+D  +  E+P +EY +YFAP+ +L
Sbjct: 305 RCWTYETSLLVDETISEELPYSEYFEYFAPDFTL 338


>gi|449440644|ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
 gi|449523768|ref|XP_004168895.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
          Length = 465

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/358 (61%), Positives = 277/358 (77%), Gaps = 5/358 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  Y+G  HPMKPHR+ M H+L++ Y LH++MEI RP+ A P ++ +F
Sbjct: 19  KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINRPYPAGPEDIRRF 78

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS DYV+FL  ++P+T   H F + L ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN
Sbjct: 79  HSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 138

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINWAGGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEE
Sbjct: 139 RGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDVHHGDGVEE 198

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTG +K++G   GK YA+NVPL DG+DD SF  LF+ +
Sbjct: 199 AFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGVGTGKNYALNVPLNDGMDDDSFRGLFRPL 257

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ FN+PL+V GGGGYT
Sbjct: 258 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 317

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI--PNGHIVCSFKEIDKF 357
             NVARCW  ET + +  E  N++P NEY +YF P+ +L I   N   + S K+++K 
Sbjct: 318 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYALHIEPSNMENLNSPKDMEKI 375


>gi|47682973|gb|AAH70873.1| Hdac3 protein [Xenopus laevis]
          Length = 445

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 208/334 (62%), Positives = 265/334 (79%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 22  VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 81

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A  LNN+ CD
Sbjct: 82  DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCD 141

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 142 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 201

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I +V+
Sbjct: 202 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVI 261

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV++VK FN+PLLV GGGGYT  NVA
Sbjct: 262 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVA 321

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           RCWT ET +L+D  +  E+P +EY +YFAP+ +L
Sbjct: 322 RCWTYETSLLVDETISEELPYSEYFEYFAPDFTL 355


>gi|356513715|ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 476

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/341 (63%), Positives = 267/341 (78%), Gaps = 3/341 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  Y+G  HPMKPHR+ M H+L++ Y LH++MEI RP  A P ++ +F
Sbjct: 29  KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPASPADIRRF 88

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS DYV+FL  ++P+T     F + L ++N+GEDCPVF+ LF FCQ  AGG++ AA +LN
Sbjct: 89  HSDDYVDFLSSVSPETLADSAFSRHLKRFNVGEDCPVFDGLFPFCQASAGGSLGAAVKLN 148

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGVEE
Sbjct: 149 RADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 208

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTG VK+IG   GK YA+NVPL DG+DD SF  LF+TI
Sbjct: 209 AFYTTDRVMTVSFHKFGD-FFPGTGHVKDIGVGSGKNYAVNVPLNDGMDDESFRSLFRTI 267

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ FN+PL+V GGGGYT
Sbjct: 268 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNVPLMVLGGGGYT 327

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  E  N++P NEY +YF P+ +L +
Sbjct: 328 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYV 368


>gi|344301496|gb|EGW31808.1| hypothetical protein SPAPADRAFT_140568 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 468

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 205/340 (60%), Positives = 272/340 (80%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++F+ R++PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFISRVSPDNLELFAKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVM+ SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +I
Sbjct: 196 FYTTDRVMSCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSIFEPLI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +K+VE Y P AIVLQCG DSL+GDRLGCFNLS+ GHA C+ FVK FN+P++V GGGGYT 
Sbjct: 255 TKIVEWYQPSAIVLQCGGDSLSGDRLGCFNLSMSGHANCINFVKSFNIPMMVLGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  E+G+L +  LP+E+P NEY +Y+AP+  L +
Sbjct: 315 RNVARTWAFESGLLNNVVLPSELPYNEYYEYYAPDYKLDV 354


>gi|328770569|gb|EGF80610.1| hypothetical protein BATDEDRAFT_24371 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 560

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 212/344 (61%), Positives = 267/344 (77%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SY+Y  DVG  ++GP HPMKPHR+ MTH+LV++Y L+KK+EI RP  A   E+ +F
Sbjct: 14  KSKVSYYYHDDVGLYHYGPQHPMKPHRIRMTHNLVVNYGLYKKLEINRPTPATLKEMTKF 73

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY+EFLHR+ PD      +   K+NLGEDCPV++ L+EFC + AGG++ AA +LN  
Sbjct: 74  HSDDYIEFLHRVQPDNTDEINKYQQKFNLGEDCPVWDGLYEFCALSAGGSLSAASKLNRG 133

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDID HHGDGVEEAF
Sbjct: 134 ESDIAINWSGGLHHAKKGEASGFCYVNDIVLGILELLRYHQRVLYIDIDNHHGDGVEEAF 193

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+ ++G   GK +AIN PLKDGIDD S+  +F T+++
Sbjct: 194 YTTDRVMTVSFHKYGE-YFPGTGDINDVGHGRGKHFAINFPLKDGIDDESYKDIFSTVLT 252

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y PGA++LQCGADSLAGDRLGCFNLS+ GHA  V F+KKFN+PL++ GGGGYT  
Sbjct: 253 SVMERYRPGAVILQCGADSLAGDRLGCFNLSMHGHAYAVDFMKKFNVPLMILGGGGYTIR 312

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NV R WT ET   +D EL  E+P N+Y +YF P   L +P+ ++
Sbjct: 313 NVCRTWTYETARCVDEELSEELPYNDYFQYFGPSFRLEVPSTNM 356


>gi|198436104|ref|XP_002124762.1| PREDICTED: similar to LOC432017 protein [Ciona intestinalis]
          Length = 434

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 268/339 (79%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S +K++YFYD DV   ++GP HPMKPHRL +TH LVL Y LH KM++++P++A   ++ +
Sbjct: 5   SNNKVAYFYDMDVSRFHYGPGHPMKPHRLALTHTLVLHYGLHNKMQMFKPYRATSHDMCR 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL RITP     F + L  +N+G+DCPVF  L++FC +Y G ++ AA  LNN
Sbjct: 65  FHSEDYINFLQRITPMNLAGFTKNLKLFNVGDDCPVFPGLYDFCSMYTGASLQAATMLNN 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLY+DIDVHHGDGV+EA
Sbjct: 125 KKSDIAINWSGGLHHAKKYEASGFCYVNDIVIAILELLKYHPRVLYLDIDVHHGDGVQEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLKDGI+D ++ +L K I+
Sbjct: 185 FYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSLNVPLKDGINDQAYQQLLKPIM 244

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+++Y P  IV+QCGADSL  DRLGCFNL+IDGH ECV+F+K+F +P++V GGGGYT 
Sbjct: 245 KAVMQSYQPTCIVMQCGADSLGCDRLGCFNLTIDGHGECVKFMKEFGVPMMVLGGGGYTV 304

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 341
            NVARCWT ET I++  E+ +E+P NEY +YF P+ +LR
Sbjct: 305 RNVARCWTHETSIIVGQEINDELPYNEYFEYFGPDYTLR 343


>gi|443689292|gb|ELT91729.1| hypothetical protein CAPTEDRAFT_175897 [Capitella teleta]
          Length = 543

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 276/340 (81%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRP KA   E+ +
Sbjct: 8   SKRKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPQKAVAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN 
Sbjct: 68  FHSDDYIRFLRNIRPDNMSDYNKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINW+GGLHHAKK EASGFCY+ND+VL ILE+LKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QATDIAINWSGGLHHAKKSEASGFCYVNDIVLAILEMLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S++ +F+ ++
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYSSIFEPVM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+ETY P AIVLQCGADSL+GDRLGCFNLS+ GH +CV F+KKFNLPLL+ GGGGYT 
Sbjct: 247 SKVMETYQPSAIVLQCGADSLSGDRLGCFNLSLKGHGKCVDFMKKFNLPLLLVGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR WT ET I L  ++ NE+P N+Y +Y+ P+  L I
Sbjct: 307 RNVARAWTFETSIALGVDIANELPYNDYFEYYGPDFKLHI 346


>gi|6840851|gb|AAF28798.1|AF098295_1 histone deacetylase 3 [Mus musculus]
          Length = 428

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/365 (58%), Positives = 276/365 (75%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLDAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWA GLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWARGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPG GD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGAGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|356562692|ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 472

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/341 (62%), Positives = 267/341 (78%), Gaps = 3/341 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  Y+G  HPMKPHR+ M H+L++ Y LH++MEI RP  A P ++ +F
Sbjct: 25  KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPASPADIRRF 84

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS DYV+FL  ++P+T     F + L ++N+GEDCPVF+ LF FCQ  AGG++ AA +LN
Sbjct: 85  HSDDYVDFLSSVSPETLADSAFSRHLKRFNVGEDCPVFDGLFPFCQASAGGSLGAAVKLN 144

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGVEE
Sbjct: 145 RADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKAHRRVLYVDIDVHHGDGVEE 204

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTG VK+IG   GK YA+NVPL DG+DD SF  LF++I
Sbjct: 205 AFYTTDRVMTVSFHKFGD-FFPGTGHVKDIGVGSGKNYAVNVPLNDGMDDESFRSLFRSI 263

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ FN+PL+V GGGGYT
Sbjct: 264 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNVPLMVLGGGGYT 323

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  E  N++P NEY +YF P+ +L +
Sbjct: 324 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYV 364


>gi|50285207|ref|XP_445032.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524335|emb|CAG57932.1| unnamed protein product [Candida glabrata]
          Length = 433

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 210/358 (58%), Positives = 280/358 (78%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLEMFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK+YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYYAVNVPLRDGIDDATYRSVFEPVIG 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETG+L +  L  E+P NEY +Y+ P+  L  R  N + V + + +DK +L
Sbjct: 317 NVARTWCFETGLLNNVVLDQELPYNEYYEYYGPDYKLDVRPSNMYNVNTPEYLDKILL 374


>gi|194384520|dbj|BAG59420.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/345 (62%), Positives = 278/345 (80%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 103 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 162

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 163 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 222

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 223 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 282

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 283 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 341

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCGADSL+GDRLGCFNL++  HA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 342 MVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKDHAKCVEVVKTFNLPLLMLGGGGYTIR 401

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 402 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 446


>gi|388851970|emb|CCF54326.1| probable histone deacetylase [Ustilago hordei]
          Length = 590

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 210/340 (61%), Positives = 270/340 (79%), Gaps = 1/340 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++Y+YD DVG+  +G  HPMKPHR+ MTH+LV +Y LHKKM+I RP +A   ++ +F
Sbjct: 11  RKRVAYYYDHDVGNFSYGLGHPMKPHRMRMTHNLVTNYGLHKKMDILRPKRATRNQMTRF 70

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +YV+FLHR+TP+T H    E T+Y +GEDCP F+ L+EFC I AGG++ AA RLN+ 
Sbjct: 71  HTDEYVDFLHRVTPETVHELTNEGTRYLIGEDCPAFDGLYEFCSISAGGSLAAATRLNSG 130

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+AINWAGGLHHAKK EASGFCY+ND+VL ILELL+ H RVLYIDID+HHGDGVEEAF
Sbjct: 131 ESDVAINWAGGLHHAKKREASGFCYVNDIVLAILELLRVHLRVLYIDIDIHHGDGVEEAF 190

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHKFGD FFPGTGDV++IG ++GK Y +NVPL+DGI D  F  +F+ +IS
Sbjct: 191 YTTDRVMTASFHKFGD-FFPGTGDVRDIGMKKGKNYCVNVPLRDGIGDLEFGNIFRPVIS 249

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++  Y PGA+VLQCGADSLAGD+LGCFNLS+ GHA+CV F++ F++PL+  GGGGYT  
Sbjct: 250 HIMGWYRPGAVVLQCGADSLAGDKLGCFNLSMRGHADCVAFMQTFDVPLITLGGGGYTVR 309

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           NVAR WT ETG+L+  +L  ++P N+YI+YF PE  L +P
Sbjct: 310 NVARTWTYETGLLVGEKLDEDLPFNDYIQYFGPEYKLEVP 349


>gi|322707596|gb|EFY99174.1| histone deacetylase RpdA/Rpd3 [Metarhizium anisopliae ARSEF 23]
          Length = 649

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 209/358 (58%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 22  SAKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 81

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 82  FHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 141

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIA+NWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 142 QKCDIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEA 201

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK Y++N PL+DGI D ++  +F+ +I
Sbjct: 202 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGQGKNYSVNFPLRDGITDQTYKSIFEPVI 260

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS+DGHA CV +VK F LP LV GGGGYT 
Sbjct: 261 ESVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNYVKSFGLPTLVLGGGGYTM 320

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
            NVAR W  ETG+L+  E+   +P NEY +Y+AP  E ++R  N     S + +DK  
Sbjct: 321 RNVARTWAYETGVLVGQEMDRTLPYNEYYEYYAPDFELNVRASNMENSNSREYLDKIT 378


>gi|190346151|gb|EDK38167.2| hypothetical protein PGUG_02265 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 507

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 205/340 (60%), Positives = 269/340 (79%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 76  FHTDEYIDFLSRVTPDNLDMFAKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG+++++G  +GK++AINVPL+DGIDD+S+  +F+ +I
Sbjct: 196 FYTTDRVMTASFHKYGE-FFPGTGELRDVGIGKGKYHAINVPLRDGIDDSSYKSIFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E Y P  +VLQCG DSL+GDRLGCFNLS+ GHA C+ FVK FN+P++V GGGGYT 
Sbjct: 255 QKIMEWYQPSCVVLQCGGDSLSGDRLGCFNLSMAGHANCINFVKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  E G+L +  LP+E+P NEY +Y+ P+  L +
Sbjct: 315 RNVARTWAFEAGLLNNVVLPSELPYNEYYEYYGPDYKLDV 354


>gi|219121958|ref|XP_002181323.1| histone deacetylase 1 isoform [Phaeodactylum tricornutum CCAP
           1055/1]
 gi|217407309|gb|EEC47246.1| histone deacetylase 1 isoform [Phaeodactylum tricornutum CCAP
           1055/1]
          Length = 426

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 208/343 (60%), Positives = 264/343 (76%), Gaps = 1/343 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    ++SYFYD ++G+ ++G  HPMKPHR+ MTH+LV++Y L++KME++RP    P  +
Sbjct: 1   MGDSRRVSYFYDAEIGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRKMEVFRPRLVSPTAM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DY+ FL  ITPD    + + L ++N+GEDCPVF+ LFEFCQ+Y  G+I  A RL
Sbjct: 61  TRFHSDDYINFLRVITPDNMQDYIRPLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAARL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N    DI INWAGGLHHAKK EASGFCY+ND VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 121 NENRVDIVINWAGGLHHAKKAEASGFCYVNDCVLAILELLKKHERVLYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RVMTVSFHKFG+ +FPGTGDV ++G  +GK YAIN PL DG+DD S+  +F+ 
Sbjct: 181 EAFYSTNRVMTVSFHKFGE-YFPGTGDVLDVGYAQGKNYAINFPLNDGMDDDSYESIFRP 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I K++E +APGA+VLQCGADSL+GDRLGCFNLS  GHA CV FV+ FN+P+LV GGGGY
Sbjct: 240 VIGKIMEVFAPGAVVLQCGADSLSGDRLGCFNLSAQGHANCVEFVRSFNIPMLVLGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           T  NV RCWT ET +L   ++ +E+P N+Y +YF P+  L +P
Sbjct: 300 TLRNVPRCWTYETSVLTGEKVSDELPFNDYFEYFGPDYRLHLP 342


>gi|84995884|ref|XP_952664.1| histone deacetylase [Theileria annulata strain Ankara]
 gi|65302825|emb|CAI74932.1| histone deacetylase, putative [Theileria annulata]
          Length = 446

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/341 (63%), Positives = 267/341 (78%), Gaps = 5/341 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD DVGS Y+GP HPMKP R+ M H LVLSYDL++ MEI+RPHKA   EL  FH 
Sbjct: 4   RVSYFYDPDVGSFYYGPGHPMKPQRIRMAHALVLSYDLYRHMEIFRPHKAVEPELLSFHD 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           ++YV FL  ++P+    F  +L ++N+GE  DCPVF+ L+ F Q  +G +IDAA RLNNQ
Sbjct: 64  SEYVHFLSGVSPENYRDFTYQLKRFNVGEATDCPVFDGLYVFQQSCSGASIDAAHRLNNQ 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NW+GGLHHAK+ EASGFCY+ND+VLGILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QADICVNWSGGLHHAKRSEASGFCYLNDIVLGILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T RVMT+SFHKFG+ FFPGTGDV ++G   GK+Y++NVPL DGIDD SF  LFK ++ 
Sbjct: 184 YVTHRVMTISFHKFGN-FFPGTGDVTDVGVSSGKYYSVNVPLNDGIDDESFVDLFKVVVG 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K VE Y PGAIVLQCGADSL GDRLG FNL+I GHA CV++V+  N+PLLV GGGGYT  
Sbjct: 243 KCVEVYCPGAIVLQCGADSLTGDRLGRFNLTIKGHAACVQYVRSLNIPLLVLGGGGYTIR 302

Query: 304 NVARCWTVETGILLD--TELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG++L+  T++ N+I  N+Y  Y+AP+  L +
Sbjct: 303 NVARCWAYETGVILNKHTDMSNQISLNDYYDYYAPDFQLHL 343


>gi|358390497|gb|EHK39902.1| hypothetical protein TRIATDRAFT_163610, partial [Trichoderma
           atroviride IMI 206040]
          Length = 672

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 208/348 (59%), Positives = 269/348 (77%), Gaps = 1/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 18  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIAINWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 138 QKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 198 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGQGKNYAVNFPLRDGITDDSYKSIFEPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ + P A+VLQCG DSL+GDRLG FNLS+DGHA CV FVK FNLP LV GGGGYT 
Sbjct: 257 ENVMKYFQPEAVVLQCGGDSLSGDRLGAFNLSMDGHANCVNFVKSFNLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
            NVAR W  ETG+L+  E+   +P NEY +Y+AP+  L + + ++  S
Sbjct: 317 RNVARTWAFETGVLVGQEMDRTLPYNEYYEYYAPDFELNVRSSNMENS 364


>gi|378728621|gb|EHY55080.1| histone deacetylase 1/2 [Exophiala dermatitidis NIH/UT8656]
          Length = 737

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 205/340 (60%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++YFYD DVG+  +   HPMKPHR+ + H LV++Y L+KKMEIYR   A   E+ Q
Sbjct: 17  SKKRVAYFYDSDVGNYAYVSGHPMKPHRIRLAHSLVMNYGLYKKMEIYRAKPASKYEMTQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 77  FHTDEYIDFLAKVTPDNMDSYPKEQQKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VLGILELL++H RVLY+DIDVHHGDGVEEA
Sbjct: 137 QKADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRFHKRVLYVDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG   GK+YA+N PL+DGIDD S+  +F+ +I
Sbjct: 197 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKYYAVNFPLRDGIDDNSYKGIFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV+FVK FNLP L+ GGGGYT 
Sbjct: 256 RATMEYYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVQFVKSFNLPTLIVGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+R W  ETG L+   +   +P N+Y +Y+AP+  L +
Sbjct: 316 RNVSRTWAFETGCLVGENMQANLPYNDYYEYYAPDYELDV 355


>gi|308800314|ref|XP_003074938.1| histone deacetylase (ISS) [Ostreococcus tauri]
 gi|116061490|emb|CAL52208.1| histone deacetylase (ISS) [Ostreococcus tauri]
          Length = 413

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 211/336 (62%), Positives = 264/336 (78%), Gaps = 10/336 (2%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +KD+I Y+YD +VG  Y+GPNHPMKPHRLCMTH+L+L+YDLHK +++YRP ++   E 
Sbjct: 1   MVAKDRICYYYDEEVGRNYYGPNHPMKPHRLCMTHNLILAYDLHKHLQVYRPRESTNEEF 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            QFHS DY+ FL +ITPD Q     E+ ++NLGEDCP+F+++ +FC+ Y GG++D ARRL
Sbjct: 61  TQFHSEDYIAFLSKITPDKQQQHVLEMQRFNLGEDCPIFDHMLDFCRRYTGGSVDGARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N  L D+AINW+         EASGFCY+NDLVL ILELLK+HARVLYIDID+HHGDGVE
Sbjct: 121 NQGLSDVAINWS---------EASGFCYVNDLVLAILELLKHHARVLYIDIDIHHGDGVE 171

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+GD+FFPGTG +++IG   GK+Y++NVPL DGIDD  F  LFK 
Sbjct: 172 EAFYVTDRVMTVSFHKYGDMFFPGTGGLRDIGINSGKYYSVNVPLNDGIDDKIFVDLFKF 231

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++  V++ + PGAIVLQCGADSLAGDR+GCFN+S+ GHAECV FV  F  P+LVTGGGGY
Sbjct: 232 VVQDVMDVFQPGAIVLQCGADSLAGDRIGCFNISLKGHAECVSFVNSFKKPMLVTGGGGY 291

Query: 301 TKENVARCWTVETGILLDTELPNEIPENE-YIKYFA 335
           TK NVARCW  ET  LL  +L  +IP +E Y +Y+A
Sbjct: 292 TKSNVARCWANETATLLGRKLAEDIPYHENYYEYYA 327


>gi|41055869|ref|NP_957284.1| histone deacetylase 3 [Danio rerio]
 gi|82177019|sp|Q803C3.1|HDAC3_DANRE RecName: Full=Histone deacetylase 3; Short=HD3
 gi|27882115|gb|AAH44543.1| Histone deacetylase 3 [Danio rerio]
          Length = 428

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 212/367 (57%), Positives = 279/367 (76%), Gaps = 6/367 (1%)

Query: 5   DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
           ++ +YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P+KA   ++ +FH
Sbjct: 3   NRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62

Query: 65  SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           S DY++FL +++P+    F + L  +N+G DCPVF  LFEFC  Y G ++  A +LN+++
Sbjct: 63  SEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
           CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT  N
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRN 302

Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFI 358
           VARCWT ET +L++  + +E+P +EY +YFAP+ +L      RI N +     ++I + +
Sbjct: 303 VARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362

Query: 359 LFNKQIL 365
             N ++L
Sbjct: 363 FENLKML 369


>gi|400602057|gb|EJP69682.1| histone deacetylase domain-containing protein [Beauveria bassiana
           ARSEF 2860]
          Length = 636

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 205/345 (59%), Positives = 268/345 (77%), Gaps = 1/345 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ QFH+
Sbjct: 23  KVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHT 82

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN Q C
Sbjct: 83  DDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKC 142

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 143 DIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEAFYT 202

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG  +GK Y++N PL+DGI D S+  +F+ +I  V
Sbjct: 203 TDRVMTVSFHKYGE-YFPGTGELRDIGIGQGKHYSVNYPLRDGITDESYRSIFEPVIENV 261

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG DSL+GDRLGCFNLS+DGHA CV +VK F LP LV GGGGYT  NV
Sbjct: 262 MKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNYVKSFGLPTLVLGGGGYTMRNV 321

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
           AR W  ETG+L+  E+   +P NEY +Y+AP+  L + + ++  S
Sbjct: 322 ARTWAFETGVLVGQEMERTLPYNEYYEYYAPDFELNVRSSNMENS 366


>gi|1667394|gb|AAC50814.1| transcriptional regulator homolog RPD3 [Homo sapiens]
          Length = 488

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/345 (62%), Positives = 277/345 (80%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++  +N+GEDCP F+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMHIFNVGEDCPAFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKYEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P+ DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMCDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|71029932|ref|XP_764608.1| histone deacetylase [Theileria parva strain Muguga]
 gi|68351564|gb|EAN32325.1| histone deacetylase, putative [Theileria parva]
          Length = 447

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/341 (63%), Positives = 267/341 (78%), Gaps = 5/341 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD DVGS Y+GP HPMKP R+ M H LVLSYDL++ MEI+RPHKA   EL  FH 
Sbjct: 4   RVSYFYDPDVGSFYYGPGHPMKPQRIRMAHALVLSYDLYRHMEIFRPHKAVEPELLSFHD 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           ++YV FL  ++P+    F  +L ++N+GE  DCPVF+ L+ F Q  +G +IDAA RLNNQ
Sbjct: 64  SEYVHFLSGVSPENYRDFTYQLKRFNVGEATDCPVFDGLYVFQQSCSGASIDAAHRLNNQ 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NW+GGLHHAK+ EASGFCY+ND+VLGILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QADICVNWSGGLHHAKRSEASGFCYLNDIVLGILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T RVMT+SFHKFG+ FFPGTGDV ++G   GK+Y++NVPL DGIDD SF  LFK ++ 
Sbjct: 184 YVTHRVMTISFHKFGN-FFPGTGDVTDVGVSSGKYYSVNVPLNDGIDDESFVDLFKVVVG 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K VE Y PGAIVLQCGADSL GDRLG FNL+I GHA CV++V+  N+PLLV GGGGYT  
Sbjct: 243 KCVEVYCPGAIVLQCGADSLTGDRLGRFNLTIKGHAACVQYVRSLNIPLLVLGGGGYTIR 302

Query: 304 NVARCWTVETGILLD--TELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG++L+  T++ N+I  N+Y  Y+AP+  L +
Sbjct: 303 NVARCWAYETGVILNKHTDMSNQISLNDYYDYYAPDFQLHL 343


>gi|268559622|ref|XP_002637802.1| C. briggsae CBR-HDA-1 protein [Caenorhabditis briggsae]
          Length = 455

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 207/339 (61%), Positives = 267/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++Y+YD ++G+ Y+G  H MKPHR+ MTHHLVL+Y L++ MEI+RP  A   ++ +F
Sbjct: 12  KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRSMEIFRPFPATFDDMTRF 71

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL    PD    F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct: 72  HSEEYMLFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+GD FFPGTGD+K+IG  +GK Y++NVPL+DGI D+S+  +FK I++
Sbjct: 192 YTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDSSYQSIFKPIMT 250

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT  
Sbjct: 251 KVMERFDPSAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET I +D E+ NE+P N+Y +YF P   L I
Sbjct: 311 NVARCWTYETSIAVDREVANELPYNDYFEYFGPNYRLHI 349


>gi|17561978|ref|NP_506599.1| Protein HDA-1 [Caenorhabditis elegans]
 gi|3023926|sp|O17695.1|HDA1_CAEEL RecName: Full=Histone deacetylase 1
 gi|3875199|emb|CAB03984.1| Protein HDA-1 [Caenorhabditis elegans]
          Length = 461

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 207/339 (61%), Positives = 267/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++Y+YD ++G+ Y+G  H MKPHR+ MTHHLVL+Y L++ +EI+RP  A   ++ +F
Sbjct: 12  KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL    PD    F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct: 72  HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+GD FFPGTGD+K+IG  +GK Y++NVPL+DGI D S+  +FK I++
Sbjct: 192 YTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMT 250

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT  
Sbjct: 251 KVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET I +D E+PNE+P N+Y +YF P   L I
Sbjct: 311 NVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHI 349


>gi|366997625|ref|XP_003683549.1| hypothetical protein TPHA_0A00300 [Tetrapisispora phaffii CBS 4417]
 gi|357521844|emb|CCE61115.1| hypothetical protein TPHA_0A00300 [Tetrapisispora phaffii CBS 4417]
          Length = 433

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 211/358 (58%), Positives = 280/358 (78%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +++YFYD DVG+  +G  HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ Q
Sbjct: 17  NKKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPATKQEMCQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 77  FHTDEYIDFLSRVTPDNLDMFKKESVKFNVGDDCPVFDGLFEYCSISGGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 137 GKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG+++++G  +GK YA+NVPL+DG+DD ++  +F+++I
Sbjct: 197 FYTTDRVMTCSFHKYGE-FFPGTGELRDVGIGKGKNYAVNVPLRDGMDDATYRSVFESVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FN+P++V GGGGYT 
Sbjct: 256 SKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNIPMMVVGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
            NVAR W  ETG+L +  L  ++P N+Y +Y+ P+  L  R  N   V S + +DK +
Sbjct: 316 RNVARTWCFETGLLNNVILDEDLPYNDYYEYYGPDYKLDVRPSNMFNVNSPEYLDKIL 373


>gi|429327154|gb|AFZ78914.1| histone deacetylase, putative [Babesia equi]
          Length = 448

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/341 (64%), Positives = 266/341 (78%), Gaps = 5/341 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD DVGS Y+GP HPMKP R+ M H LVLSYDL++ MEI+RPHKA   EL  FH 
Sbjct: 4   RVSYFYDPDVGSYYYGPGHPMKPQRIRMAHALVLSYDLYRHMEIFRPHKAVEPELLSFHD 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           ++YV FL  ++P+    F  +L ++N+GE  DCPVF+ L+ F Q  +G +IDAA RLNNQ
Sbjct: 64  SEYVHFLSGVSPENYRDFTYQLKRFNVGEATDCPVFDGLYVFQQSCSGASIDAAYRLNNQ 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INW+GGLHHAK+ EASGFCY+ND+VLGILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QADICINWSGGLHHAKRSEASGFCYLNDIVLGILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T RVMTVSFHKFG+ FFPGTGDV ++G   GK+Y++NVPL DG+DD SF  LFK ++ 
Sbjct: 184 YVTHRVMTVSFHKFGN-FFPGTGDVTDVGVSSGKYYSVNVPLNDGMDDDSFVDLFKVVVG 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K VE Y PGAIVLQCGADSL GDRLG FNL+I GHA CV+FV+  N+PLLV GGGGYT  
Sbjct: 243 KCVEVYCPGAIVLQCGADSLTGDRLGRFNLTIKGHAACVQFVRSLNIPLLVLGGGGYTIR 302

Query: 304 NVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETGI+LD   ++ N+I  N+Y  Y+AP+  L +
Sbjct: 303 NVARCWAYETGIILDKHEDMSNQISLNDYYDYYAPDFQLHL 343


>gi|298706465|emb|CBJ29452.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 447

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 209/345 (60%), Positives = 270/345 (78%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++SYFYD ++G+ ++G  HPMKPHR+ MTH+LV++Y L+++ME++RP       + +
Sbjct: 11  NKRRVSYFYDAEIGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRQMEVFRPKPISSQHMTR 70

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  IT D       +L ++N+GEDCPVF+ LFEFCQ+Y  G+I  A RLNN
Sbjct: 71  FHSDDYINFLRVITQDNMQHNYTQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAIRLNN 130

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  D+ INWAGGLHHAKK EASGFCY+ND VL ILELLK H RVLYIDID+HHGDGVEEA
Sbjct: 131 KQSDVVINWAGGLHHAKKSEASGFCYVNDCVLAILELLKTHQRVLYIDIDIHHGDGVEEA 190

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RVMTVSFHKFG+ +FPGTGDVK++G  +GK YAIN PL DGI+D S+  +F+ +I
Sbjct: 191 FYTTNRVMTVSFHKFGE-YFPGTGDVKDVGVAQGKNYAINFPLADGINDQSYRSIFRPVI 249

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E Y+P AIV+QCGADSL+GDRLGCFNLS+ GHA+CV++VK FN+PLLV GGGGYT 
Sbjct: 250 EKVMEHYSPEAIVMQCGADSLSGDRLGCFNLSLKGHADCVQYVKSFNVPLLVLGGGGYTL 309

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NV RCW  ETG+LLDTE  + +P N+Y +Y+ P+  L +P  ++
Sbjct: 310 RNVPRCWAYETGVLLDTEPSDMLPYNDYFEYYGPDYRLHMPTSNM 354


>gi|346325878|gb|EGX95474.1| histone deacetylase RpdA/Rpd3 [Cordyceps militaris CM01]
          Length = 638

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 205/348 (58%), Positives = 269/348 (77%), Gaps = 1/348 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L++KMEIYR   A   E+ Q
Sbjct: 20  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQ 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 80  FHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIA+NWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 140 QKCDIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK Y++N PL+DGI D S+  +F+ +I
Sbjct: 200 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYSVNYPLRDGITDDSYKSIFEPVI 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS+DGHA CV +VK F LP LV GGGGYT 
Sbjct: 259 ENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVSYVKSFGLPTLVLGGGGYTM 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCS 350
            NVAR W  ETG+L+  ++   +P NEY +Y+AP+  L + + ++  S
Sbjct: 319 RNVARTWAFETGVLVGQDMDRTLPYNEYYEYYAPDFELNVRSSNMENS 366


>gi|310790223|gb|EFQ25756.1| histone deacetylase domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 679

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 211/354 (59%), Positives = 271/354 (76%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD D+G+  +   HPMKPHR+ + H L++ YDL K MEIYR   A   E+ QFH+
Sbjct: 18  KVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMHYDLFKNMEIYRAKPATRGEMTQFHT 77

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    +++E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN Q C
Sbjct: 78  DEYIDFLQKVTPDNMDAYQKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKC 137

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 138 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKKRVLYIDIDVHHGDGVEEAFYT 197

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDDTS+  +F+ +I  V
Sbjct: 198 TDRVMTVSFHKYGE-YFPGTGELRDIGIGTGKHYAVNFPLRDGIDDTSYKSIFEPVIEHV 256

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F LP LV GGGGYT  NV
Sbjct: 257 MKFYQPEAVVLQCGGDSLSGDRLGCFNLSMEGHANCVAYVKSFGLPTLVLGGGGYTMRNV 316

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKF 357
           AR W  ETG+L+   LP  +P NEY +Y+AP  E ++R  N     SF+ ++K 
Sbjct: 317 ARTWAFETGVLVGKHLPKTLPYNEYYEYYAPDFELNVRPSNMENSNSFEYLEKI 370


>gi|429862541|gb|ELA37184.1| histone deacetylase rpd3 [Colletotrichum gloeosporioides Nara gc5]
          Length = 679

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 211/357 (59%), Positives = 272/357 (76%), Gaps = 3/357 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ YDL K MEIYR   A   E+ Q
Sbjct: 16  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMHYDLFKNMEIYRAKPATRGEMTQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL ++TPD    +++E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 76  FHTDEYIDFLQKVTPDNMDAYQKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 136 QKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKKRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG   GK+YA+N PL+DGIDD S+  +F+ +I
Sbjct: 196 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGTGKYYAVNFPLRDGIDDNSYKSIFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F LP LV GGGGYT 
Sbjct: 255 EHVMKFYQPEAVVLQCGGDSLSGDRLGCFNLSMEGHANCVGYVKSFGLPTLVLGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKF 357
            NVAR W  ETG+L+   LP  +P NEY +Y+AP  E ++R  N     SF+ ++K 
Sbjct: 315 RNVARTWAYETGVLVGKHLPRTLPYNEYYEYYAPDFELNVRPSNMENSNSFEYLEKI 371


>gi|380485153|emb|CCF39543.1| histone deacetylase [Colletotrichum higginsianum]
          Length = 699

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 210/354 (59%), Positives = 271/354 (76%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD D+G+  +   HPMKPHR+ + H L++ YDL K MEIYR   A   E+ QFH+
Sbjct: 18  KVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMHYDLFKNMEIYRAKPATRGEMTQFHT 77

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    +++E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN Q C
Sbjct: 78  DEYIDFLQKVTPDNMDAYQKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKC 137

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 138 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKKRVLYIDIDVHHGDGVEEAFYT 197

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDDTS+  +F+ +I  V
Sbjct: 198 TDRVMTVSFHKYGE-YFPGTGELRDIGIGTGKHYAVNFPLRDGIDDTSYKSIFEPVIEHV 256

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F LP LV GGGGYT  NV
Sbjct: 257 MKFYQPEAVVLQCGGDSLSGDRLGCFNLSMEGHANCVAYVKSFGLPTLVLGGGGYTMRNV 316

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKF 357
           AR W  ETG+L+   LP  +P NEY +Y+AP  E ++R  N     S++ ++K 
Sbjct: 317 ARTWAFETGVLVGKHLPKTLPYNEYYEYYAPDFELNVRPSNMENSNSYEYLEKI 370


>gi|254579645|ref|XP_002495808.1| ZYRO0C03498p [Zygosaccharomyces rouxii]
 gi|238938699|emb|CAR26875.1| ZYRO0C03498p [Zygosaccharomyces rouxii]
          Length = 433

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 204/341 (59%), Positives = 271/341 (79%), Gaps = 1/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           R K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ 
Sbjct: 16  RDKKRVAYFYDADVGNYNYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMC 75

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN
Sbjct: 76  QFHTDEYIDFLSRVTPDNLDMFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLN 135

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEE
Sbjct: 136 RGKCDVAINYAGGLHHAKKTEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEE 195

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTG++++ G  +GK+YA+NVPL+DGIDD ++  +F+ +
Sbjct: 196 AFYTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYAVNVPLRDGIDDATYKSVFEPV 254

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +S+++E Y P A+VLQCG DSL+GDRLGCFNLSI GHA CV FVK F LP+++ GGGGYT
Sbjct: 255 VSRIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSIRGHANCVNFVKSFGLPMMIVGGGGYT 314

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETG+L +  L +E+P N+Y +Y+ P+  L +
Sbjct: 315 MRNVARTWCFETGLLNNVILDSELPYNDYYEYYGPDYKLDV 355


>gi|358381397|gb|EHK19072.1| hypothetical protein TRIVIDRAFT_114500, partial [Trichoderma virens
           Gv29-8]
          Length = 671

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 207/340 (60%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y L++KMEIYR   A   E+ Q
Sbjct: 18  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYGLYQKMEIYRAKPATRGEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIAINWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 138 QKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 198 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGQGKNYAVNFPLRDGITDESYKSIFEPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ + P A+VLQCG DSL+GDRLG FNLS+DGHA CV FVK FNLP LV GGGGYT 
Sbjct: 257 ENVMKYFQPEAVVLQCGGDSLSGDRLGAFNLSMDGHANCVNFVKSFNLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ETG+L+  E+   +P NEY +Y+AP+  L +
Sbjct: 317 RNVARTWAFETGVLVGQEMDRALPYNEYYEYYAPDFELNV 356


>gi|410075699|ref|XP_003955432.1| hypothetical protein KAFR_0A08630 [Kazachstania africana CBS 2517]
 gi|372462014|emb|CCF56297.1| hypothetical protein KAFR_0A08630 [Kazachstania africana CBS 2517]
          Length = 433

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 269/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLDMFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKNYAVNVPLRDGIDDATYKSVFEPVIG 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK FN+P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMQGHANCVNYVKSFNIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L +  L  E+P N+Y +Y+ P+  L +
Sbjct: 317 NVARTWCFETGLLNNVVLDEELPYNDYYEYYGPDYKLNV 355


>gi|443714521|gb|ELU06885.1| hypothetical protein CAPTEDRAFT_184599 [Capitella teleta]
          Length = 431

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 202/339 (59%), Positives = 269/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME----IYRPHKAYPVELA 61
           +++YFYD DVG+ ++GP HPMKP R+ +TH+LVL+Y L KKM+    +YRP++A   ++ 
Sbjct: 4   RVAYFYDPDVGNFHYGPGHPMKPQRMAVTHNLVLNYGLQKKMQASDPMYRPYRASAHDMC 63

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +FHS +Y++FL R+TP     F + L+ +N+G+DCPVF+ +F+FC +Y G ++++A +LN
Sbjct: 64  RFHSDEYIDFLQRVTPQNLQSFTKYLSMFNVGDDCPVFDGIFDFCSMYTGASLESATKLN 123

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N  CDIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+E
Sbjct: 124 NDQCDIAINWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVQE 183

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ FFPGTGD+ E+G   GK Y++NVPLK+G+DD  +  LFK+I
Sbjct: 184 AFYLTDRVMTVSFHKYGNYFFPGTGDMFELGSESGKHYSVNVPLKEGMDDAMYASLFKSI 243

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V++ Y P  IVLQCGADSL  DRLGCFNLS+ GH ECV+F+K  N+PL+V GGGGYT
Sbjct: 244 IRSVIDFYQPSCIVLQCGADSLGSDRLGCFNLSVKGHGECVKFIKDLNIPLMVLGGGGYT 303

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            +NVARCW  ET +L+D E+  ++P NEY ++F P+ SL
Sbjct: 304 LKNVARCWCYETSVLVDEEISADLPFNEYFEFFRPDFSL 342


>gi|354492211|ref|XP_003508244.1| PREDICTED: histone deacetylase 3-like, partial [Cricetulus griseus]
          Length = 419

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/360 (59%), Positives = 273/360 (75%), Gaps = 6/360 (1%)

Query: 12  DGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEF 71
           D DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS DY++F
Sbjct: 1   DPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDF 60

Query: 72  LHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINW 131
           L R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINW
Sbjct: 61  LQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINW 120

Query: 132 AGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMT 191
           AGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMT
Sbjct: 121 AGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMT 180

Query: 192 VSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAP 251
           VSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV+ Y P
Sbjct: 181 VSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKTLFQPVISQVVDFYQP 240

Query: 252 GAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTV 311
             IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT 
Sbjct: 241 TCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTY 300

Query: 312 ETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILFNKQIL 365
           ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  N ++L
Sbjct: 301 ETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKML 360


>gi|354482575|ref|XP_003503473.1| PREDICTED: histone deacetylase 2-like [Cricetulus griseus]
          Length = 476

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 212/337 (62%), Positives = 274/337 (81%), Gaps = 1/337 (0%)

Query: 12  DGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEF 71
           +GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++F
Sbjct: 5   EGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKF 64

Query: 72  LHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINW 131
           L  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NW
Sbjct: 65  LRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNW 124

Query: 132 AGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMT 191
           AGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMT
Sbjct: 125 AGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMT 184

Query: 192 VSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAP 251
           VSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P
Sbjct: 185 VSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 243

Query: 252 GAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTV 311
            A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT 
Sbjct: 244 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTY 303

Query: 312 ETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 304 ETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 340


>gi|388516701|gb|AFK46412.1| unknown [Medicago truncatula]
          Length = 459

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/346 (61%), Positives = 267/346 (77%), Gaps = 6/346 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  Y+G  HPMKPHR+ M H+L++ Y LH++M+I RP  A P ++ +F
Sbjct: 25  KRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIIHYSLHRRMQINRPFAAAPEDIRRF 84

Query: 64  HSADYVEFLHRITP----DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           HS DYVEFL  ++P    D  H   ++L ++N+GEDCPVF+ LF FCQ  AGG+I AA R
Sbjct: 85  HSDDYVEFLSSVSPEIVSDNSHSHYRQLKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVR 144

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN    DIAINWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGV
Sbjct: 145 LNRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 204

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMTVSFHKFGD FFPGTG +K+ G   GK YA+NVPL DG+DD +F  LF+
Sbjct: 205 EEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDTGVGPGKDYALNVPLNDGMDDENFRALFR 263

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            I+ KV++ Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ FN+PL+V GGGG
Sbjct: 264 PIMQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGG 323

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           YT  NVARCW  ET + +  E  N++P NEY +YF P+ +L + PN
Sbjct: 324 YTVRNVARCWCYETAVAVGVEPSNKLPYNEYYEYFGPDYTLHVEPN 369


>gi|403221622|dbj|BAM39754.1| histone deacetylase [Theileria orientalis strain Shintoku]
          Length = 445

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/341 (63%), Positives = 266/341 (78%), Gaps = 5/341 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD DVGS Y+GP HPMKP R+ M H LVLSYDL++ MEI+RPHKA   EL  FH 
Sbjct: 4   RVSYFYDPDVGSYYYGPGHPMKPQRIRMAHALVLSYDLYRHMEIFRPHKAVEPELLSFHD 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           ++YV FL  ++P+    F  +L ++N+GE  DCPVF+ L+ F Q  +G +IDAA RLNNQ
Sbjct: 64  SEYVHFLSGVSPENYRDFTYQLKRFNVGEATDCPVFDGLYVFQQSCSGASIDAAHRLNNQ 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NW+GGLHHAK+ EASGFCY+ND+VLGILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QADICVNWSGGLHHAKRSEASGFCYLNDIVLGILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T RVMTVSFHKFG+ FFPGTGDV ++G   GK+Y++NVPL DG+DD SF  LFK +I 
Sbjct: 184 YVTHRVMTVSFHKFGN-FFPGTGDVTDVGVSSGKYYSVNVPLNDGMDDESFVDLFKVVIG 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K VE Y PGAIVLQCGADSL GDRLG FNL+I GHA CV++V+  N+PLLV GGGGYT  
Sbjct: 243 KCVEVYNPGAIVLQCGADSLTGDRLGRFNLTIKGHAACVQYVRSLNIPLLVLGGGGYTIR 302

Query: 304 NVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG++L+   ++ N+I  N+Y  Y+AP+  L +
Sbjct: 303 NVARCWAYETGVILNKHEDMSNQISLNDYYDYYAPDFQLHL 343


>gi|255942905|ref|XP_002562221.1| Pc18g03850 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586954|emb|CAP94609.1| Pc18g03850 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 641

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 211/354 (59%), Positives = 272/354 (76%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 17  KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 76

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    F +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 77  DEYIDFLSKVTPDNMDHFSKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 136

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 137 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 196

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGI D ++  +F+ +I  V
Sbjct: 197 TDRVMTCSFHKYGE-YFPGTGELRDIGVGQGKNYAVNFPLRDGITDETYKSIFEPVIKSV 255

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK F+LP LV GGGGYT  NV
Sbjct: 256 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFDLPTLVLGGGGYTMRNV 315

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHIVCSFKE-IDKF 357
           AR W  ETGIL+   L +E+P N+Y +YFAP+  L + P+     + KE +DK 
Sbjct: 316 ARTWAYETGILVGEPLGSELPYNDYYEYFAPDYQLDVRPSNMDNANTKEYLDKI 369


>gi|296810874|ref|XP_002845775.1| histone deacetylase RpdA [Arthroderma otae CBS 113480]
 gi|238843163|gb|EEQ32825.1| histone deacetylase RpdA [Arthroderma otae CBS 113480]
          Length = 662

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 208/348 (59%), Positives = 269/348 (77%), Gaps = 10/348 (2%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYIN---------DLVLGILELLKYHARVLYIDIDVH 174
            CDIA+NWAGGLHHAKK EASGFCY+N         D+VLGILELL++  RVLYIDIDVH
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNGLWADVFYLDIVLGILELLRFKQRVLYIDIDVH 197

Query: 175 HGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSF 234
           HGDGVEEAFY TDRVMTVSFHK+G+ +FPGTG++++IG   GK+Y++N PL+DGIDD S+
Sbjct: 198 HGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKYYSVNFPLRDGIDDVSY 256

Query: 235 TRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLV 294
             +F+ +I  V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+
Sbjct: 257 KGIFEPVIKHVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLI 316

Query: 295 TGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            GGGGYT  NVAR W  ETG+L+  +LP E+P N+Y +YF+P+  L +
Sbjct: 317 LGGGGYTMRNVARTWAYETGVLVGNQLPAELPYNDYYEYFSPDYELDV 364


>gi|451850799|gb|EMD64100.1| hypothetical protein COCSADRAFT_181272 [Cochliobolus sativus
           ND90Pr]
          Length = 648

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 204/337 (60%), Positives = 263/337 (78%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+ KMEIYR   A   E+ QFH+
Sbjct: 26  KVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYTKMEIYRAKPASKYEMTQFHT 85

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFLH++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGGT++ A RLN   C
Sbjct: 86  DEYIEFLHKVTPDNMEQFTREQSKYNVGDDCPVFDGLFEFCGISAGGTMEGAARLNRGKC 145

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 146 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYT 205

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI D ++  +F+ +I  V
Sbjct: 206 TDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKNYSVNFPLRDGITDETYRNIFEPVIEAV 264

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  Y P AIVLQCG DSL+GDRLGCFNLS+DGHA CVR+VK F +P++V GGGGYT  NV
Sbjct: 265 MTYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANCVRYVKSFGVPVIVLGGGGYTMRNV 324

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  ++  ++P N+Y +YFAP+  L +
Sbjct: 325 ARTWAYETGELVSQKMSKQLPFNDYYEYFAPDYELDV 361


>gi|425769279|gb|EKV07776.1| Histone deacetylase RpdA/Rpd3 [Penicillium digitatum Pd1]
 gi|425770877|gb|EKV09337.1| Histone deacetylase RpdA/Rpd3 [Penicillium digitatum PHI26]
          Length = 625

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 207/337 (61%), Positives = 264/337 (78%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 17  KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKYEMTQFHT 76

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL ++TPD    F +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 77  DEYIDFLSKVTPDNMDHFSKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 136

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY 
Sbjct: 137 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYT 196

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGI D ++  +F+ +I  V
Sbjct: 197 TDRVMTCSFHKYGE-YFPGTGELRDIGVGQGKNYAVNFPLRDGITDVTYKSIFEPVIKSV 255

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK F+LP LV GGGGYT  NV
Sbjct: 256 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFDLPTLVLGGGGYTMRNV 315

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETGIL+   L +E+P N+Y +YFAP+  L +
Sbjct: 316 ARTWAYETGILVGEPLGSELPYNDYYEYFAPDYQLDV 352


>gi|308480220|ref|XP_003102317.1| CRE-HDA-1 protein [Caenorhabditis remanei]
 gi|308261983|gb|EFP05936.1| CRE-HDA-1 protein [Caenorhabditis remanei]
          Length = 509

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 267/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++Y+YD ++G+ Y+G  H MKPHR+ MTHHLVL+Y L++ +EI+RP  A   ++ +F
Sbjct: 22  KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRHLEIFRPFPASFEDMTRF 81

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL    PD    F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct: 82  HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 141

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 142 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 201

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+GD FFPGTGD+K+IG  +GK Y++NVPL+DGI D S+  +FK +++
Sbjct: 202 YTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDASYQSIFKPVMA 260

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT  
Sbjct: 261 KVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMLGGGGYTPR 320

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET + +D E+PNE+P N+Y +YF P   L I
Sbjct: 321 NVARCWTYETSVAVDKEVPNELPYNDYFEYFGPRYLLHI 359


>gi|254566249|ref|XP_002490235.1| Histone deacetylase [Komagataella pastoris GS115]
 gi|238030031|emb|CAY67954.1| Histone deacetylase [Komagataella pastoris GS115]
 gi|328350628|emb|CCA37028.1| histone deacetylase 1/2 [Komagataella pastoris CBS 7435]
          Length = 476

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 208/358 (58%), Positives = 276/358 (77%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 17  NKKRVAYFYDSDVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 77  FHTDEYIDFLARVTPDNLDMFSKEQVKFNVGDDCPVFDGLFEYCSISGGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLY+DIDVHHGDGVEEA
Sbjct: 137 GKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYVDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+NVPL+DGIDD ++  +F+ +I
Sbjct: 197 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGAGKGKNYAVNVPLRDGIDDATYRSVFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK FN+P++V GGGGYT 
Sbjct: 256 KKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMKGHANCVNYVKSFNIPMMVVGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
            NV+R WT E+G+L +  L  E+P N+Y +Y+ P+  L  R  N H   S + + K +
Sbjct: 316 RNVSRTWTFESGLLNNVLLEAELPYNDYYEYYGPDYQLDVRPSNMHNANSPEYLSKIM 373


>gi|50308073|ref|XP_454037.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643172|emb|CAG99124.1| KLLA0E01981p [Kluyveromyces lactis]
          Length = 432

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/358 (58%), Positives = 278/358 (77%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLDMFQKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++ G  +GK+YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYAVNVPLRDGIDDATYKSVFEPVIG 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV ++K F +PL++ GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMKGHANCVNYMKSFGVPLMIVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL +  L  E+P N+Y +Y+ P+  L  R  N + V + + +DK +L
Sbjct: 317 NVARTWAFETGILNNVILDEELPYNDYYEYYGPDYKLDVRPSNMYNVNTPEYLDKVLL 374


>gi|14333978|gb|AAK58884.1| reduced potassium dependency 3 Rpd3p [Kluyveromyces lactis]
          Length = 432

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/358 (58%), Positives = 278/358 (77%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLDMFQKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++ G  +GK+YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYAVNVPLRDGIDDATYKSVFEPVIG 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV ++K F +PL++ GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMKGHANCVNYMKSFGVPLMIVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL +  L  E+P N+Y +Y+ P+  L  R  N + V + + +DK +L
Sbjct: 317 NVARTWAFETGILNNVILDEELPYNDYYEYYGPDYKLDVRPSNMYNVNTPEYLDKVLL 374


>gi|260948002|ref|XP_002618298.1| hypothetical protein CLUG_01757 [Clavispora lusitaniae ATCC 42720]
 gi|238848170|gb|EEQ37634.1| hypothetical protein CLUG_01757 [Clavispora lusitaniae ATCC 42720]
          Length = 457

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 270/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 53  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 112

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R++PD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN  
Sbjct: 113 HTDEYIDFLSRVSPDNLDMFAKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRG 172

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 173 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 232

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +I+
Sbjct: 233 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDQTYKSIFEPVIT 291

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P AIVLQCG DSL+GDRLGCFNLS+ GHA CV FVK F +P++V GGGGYT  
Sbjct: 292 KIMEWYQPSAIVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFGVPMMVVGGGGYTMR 351

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  E+G+L +  LP+E+P NEY +Y+ P+  L +
Sbjct: 352 NVARTWAYESGLLNEVALPDELPYNEYYEYYGPDYKLDV 390


>gi|396460082|ref|XP_003834653.1| hypothetical protein LEMA_P067960.1 [Leptosphaeria maculans JN3]
 gi|312211203|emb|CBX91288.1| hypothetical protein LEMA_P067960.1 [Leptosphaeria maculans JN3]
          Length = 615

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/341 (60%), Positives = 264/341 (77%), Gaps = 1/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           +S  K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+ KMEIYR   A   E+ 
Sbjct: 24  KSTKKVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYNKMEIYRAKPASKYEMT 83

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y+EFLH++TPD    F++E +KYN+G+DCPVF+ LFEFC I AGGT++ A RLN
Sbjct: 84  QFHTDEYIEFLHKVTPDNMDQFQREQSKYNVGDDCPVFDGLFEFCGISAGGTMEGAARLN 143

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CD+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEE
Sbjct: 144 RGKCDVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEE 203

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGI D ++  +F+ +
Sbjct: 204 AFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKNYAVNFPLRDGITDDTYRNIFEPV 262

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V+  Y P AIVLQCG DSL+GDRLGCFNLS+DGHA CVRFVK F +P++V GGGGYT
Sbjct: 263 IEAVMTYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANCVRFVKSFGVPVIVLGGGGYT 322

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETG L+   +   +P N+Y +YFAP+  L +
Sbjct: 323 MRNVARTWAYETGELVGERMSKLLPFNDYYEYFAPDYELDV 363


>gi|410730429|ref|XP_003671394.2| hypothetical protein NDAI_0G03740 [Naumovozyma dairenensis CBS 421]
 gi|401780212|emb|CCD26151.2| hypothetical protein NDAI_0G03740 [Naumovozyma dairenensis CBS 421]
          Length = 433

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/357 (57%), Positives = 277/357 (77%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGSGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   LF++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLELFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG+++++G  +GK+YA+NVPL+DGIDD ++  +F+ ++ 
Sbjct: 198 YSTDRVMTCSFHKYGE-FFPGTGELRDVGVGKGKYYAVNVPLRDGIDDATYRNVFEPVVK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F +P++V GGGGYT  
Sbjct: 257 RIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMQGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+L +  L  E+P N+Y +Y+ P+  L  R  N   V S + +DK +
Sbjct: 317 NVARTWCFETGLLNNVVLDQELPYNDYYEYYGPDYKLDVRPSNMFNVNSPEYLDKIM 373


>gi|449272245|gb|EMC82256.1| Histone deacetylase 2, partial [Columba livia]
          Length = 477

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 212/336 (63%), Positives = 273/336 (81%), Gaps = 1/336 (0%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL
Sbjct: 7   GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 66

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWA
Sbjct: 67  RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWA 126

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTV
Sbjct: 127 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTV 186

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P 
Sbjct: 187 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPS 245

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT E
Sbjct: 246 AVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYE 305

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           T + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 306 TAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 341


>gi|357461841|ref|XP_003601202.1| Histone deacetylase [Medicago truncatula]
 gi|355490250|gb|AES71453.1| Histone deacetylase [Medicago truncatula]
          Length = 476

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/346 (61%), Positives = 267/346 (77%), Gaps = 6/346 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  Y+G  HPMKPHR+ M H+L++ Y LH++M+I RP  A P ++ +F
Sbjct: 25  KRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIIHYSLHRRMQINRPFAAAPEDIRRF 84

Query: 64  HSADYVEFLHRITP----DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           HS DYVEFL  ++P    D  H   ++L ++N+GEDCPVF+ LF FCQ  AGG+I AA R
Sbjct: 85  HSDDYVEFLSSVSPEIVSDNSHSHYRQLKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVR 144

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN    DIAINWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGV
Sbjct: 145 LNRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 204

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMTVSFHKFGD FFPGTG +K+ G   GK YA+NVPL DG+DD +F  LF+
Sbjct: 205 EEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDTGVGPGKDYALNVPLNDGMDDENFRALFR 263

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            I+ KV++ Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ FN+PL+V GGGG
Sbjct: 264 PIMQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGG 323

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           YT  NVARCW  ET + +  E  N++P NEY +YF P+ +L + PN
Sbjct: 324 YTVRNVARCWCYETAVAVGVEPSNKLPYNEYYEYFGPDYTLHVEPN 369


>gi|323456832|gb|EGB12698.1| hypothetical protein AURANDRAFT_69603 [Aureococcus anophagefferens]
          Length = 453

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/338 (60%), Positives = 265/338 (78%), Gaps = 1/338 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++YFYD ++G+ ++G  HPMKPHR+ MTH+LV++Y L++ ME++RP       + +FHS
Sbjct: 10  RVAYFYDAEIGNFHYGQGHPMKPHRVRMTHNLVVNYGLYRMMEVFRPKPVNAALMTRFHS 69

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ITPD  H + ++L ++N+GEDCPVF+ LFEFCQ+Y  G+I  A RLN Q  
Sbjct: 70  DDYINFLRIITPDNMHEYLRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAVRLNQQWS 129

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+ INWAGGLHHAKK EASGFCY+ND VLGILELLK H RVLYIDID+HHGDGVEEAFY 
Sbjct: 130 DVVINWAGGLHHAKKSEASGFCYVNDCVLGILELLKRHQRVLYIDIDIHHGDGVEEAFYT 189

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           T+RVMTVSFHKFG+ +FPGTGD  ++G  EGK YAIN PL DG+DD SF  +F+ II K+
Sbjct: 190 TNRVMTVSFHKFGE-YFPGTGDAHDVGYDEGKNYAINFPLHDGMDDASFKSIFEPIIGKI 248

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E +APGA+VLQCGADSL+GDRLGCFNLS+ GHA+CV++V  F +P+LV GGGGYT  NV
Sbjct: 249 MEVFAPGAVVLQCGADSLSGDRLGCFNLSLKGHADCVKYVMTFGVPMLVLGGGGYTLRNV 308

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            R WT ET +LL TE+ + +P N+Y +Y+ P+  L +P
Sbjct: 309 PRVWTYETSVLLGTEVKDVLPYNDYFEYYGPDYRLHMP 346


>gi|13625842|gb|AAK35180.1|AF349677_1 histone deacetylase 2 [Cochliobolus carbonum]
          Length = 648

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/337 (60%), Positives = 263/337 (78%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+ KMEIYR   A   E+ QFH+
Sbjct: 26  KVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYTKMEIYRAKPASKYEMTQFHT 85

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFLH++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGGT++ A RLN   C
Sbjct: 86  DEYIEFLHKVTPDNMEQFTREQSKYNVGDDCPVFDGLFEFCGISAGGTMEGAARLNRGKC 145

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 146 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYT 205

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI D ++  +F+ +I  V
Sbjct: 206 TDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKNYSVNFPLRDGITDETYRNIFEPVIEAV 264

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  Y P AIVLQCG DSL+GDRLGCFNLS+DGHA CVR+VK F +P++V GGGGYT  NV
Sbjct: 265 MTYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANCVRYVKSFGVPVIVLGGGGYTMRNV 324

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  ++  ++P N+Y +YFAP+  L +
Sbjct: 325 ARTWAYETGELVSQKMSKQLPFNDYYEYFAPDYELDV 361


>gi|340518111|gb|EGR48353.1| predicted protein [Trichoderma reesei QM6a]
          Length = 455

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/340 (60%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y L++KMEIYR   A   E+ Q
Sbjct: 18  SPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYGLYQKMEIYRAKPATRGEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CDIAINWAGGLHHAKKCEASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 138 QKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 198 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGQGKNYAVNFPLRDGITDESYKSIFEPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ + P A+VLQCG DSL+GDRLG FNLS+DGHA CV FVK FNLP LV GGGGYT 
Sbjct: 257 ENVMKYFQPEAVVLQCGGDSLSGDRLGAFNLSMDGHANCVNFVKSFNLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ETG+L+  E+   +P NEY +Y+AP+  L +
Sbjct: 317 RNVARTWAFETGVLVGQEMDRALPYNEYYEYYAPDFELNV 356


>gi|194741720|ref|XP_001953335.1| GF17707 [Drosophila ananassae]
 gi|190626394|gb|EDV41918.1| GF17707 [Drosophila ananassae]
          Length = 438

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/339 (61%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N+IP  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIANDIPATEYYDFFAPDFTL 343


>gi|156838932|ref|XP_001643163.1| hypothetical protein Kpol_1038p11 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113760|gb|EDO15305.1| hypothetical protein Kpol_1038p11 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 433

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/357 (59%), Positives = 277/357 (77%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLDMFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++ G  +GK YA+NVPL+DGIDD ++  +F+++IS
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKNYAVNVPLRDGIDDATYRAVFESVIS 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK F +PL+V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFGIPLMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+L +  L  ++P N+Y +Y+ P+  L  R  N + V S   +DK +
Sbjct: 317 NVARTWCFETGLLNNVILDEDLPYNDYYEYYGPDYKLDVRPSNMYNVNSPDYLDKIL 373


>gi|149430741|ref|XP_001521848.1| PREDICTED: histone deacetylase 2-like, partial [Ornithorhynchus
           anatinus]
          Length = 455

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 212/337 (62%), Positives = 274/337 (81%), Gaps = 1/337 (0%)

Query: 12  DGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEF 71
           +GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++F
Sbjct: 13  EGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKF 72

Query: 72  LHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINW 131
           L  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NW
Sbjct: 73  LRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNW 132

Query: 132 AGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMT 191
           AGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMT
Sbjct: 133 AGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMT 192

Query: 192 VSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAP 251
           VSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P
Sbjct: 193 VSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 251

Query: 252 GAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTV 311
            A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT 
Sbjct: 252 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTY 311

Query: 312 ETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 312 ETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 348


>gi|451995998|gb|EMD88465.1| hypothetical protein COCHEDRAFT_1226682 [Cochliobolus
           heterostrophus C5]
          Length = 645

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/337 (60%), Positives = 263/337 (78%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+ KMEIYR   A   E+ QFH+
Sbjct: 20  KVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYTKMEIYRAKPASKYEMTQFHT 79

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFLH++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGGT++ A RLN   C
Sbjct: 80  DEYIEFLHKVTPDNMEQFTREQSKYNVGDDCPVFDGLFEFCGISAGGTMEGAARLNRGKC 139

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 140 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYT 199

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI D ++  +F+ +I  V
Sbjct: 200 TDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKNYSVNFPLRDGITDETYRNIFEPVIEAV 258

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  Y P AIVLQCG DSL+GDRLGCFNLS+DGHA CVR+VK F +P++V GGGGYT  NV
Sbjct: 259 MTYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANCVRYVKSFGVPVIVLGGGGYTMRNV 318

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  ++  ++P N+Y +YFAP+  L +
Sbjct: 319 ARTWAYETGELVSQKMSKQLPFNDYYEYFAPDYELDV 355


>gi|367008140|ref|XP_003678570.1| hypothetical protein TDEL_0A00270 [Torulaspora delbrueckii]
 gi|359746227|emb|CCE89359.1| hypothetical protein TDEL_0A00270 [Torulaspora delbrueckii]
          Length = 433

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/357 (58%), Positives = 277/357 (77%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KRRVAYFYDADVGNFSYGQYHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   LF++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLELFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAINYAGGLHHAKKAEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG   GK+YA+NVPL+DGIDD +F  +F+ ++ 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGSGKYYAVNVPLRDGIDDATFRNVFEPVVG 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F +P++V GGGGYT  
Sbjct: 257 KIMEWYQPAAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+L +  L +E+P N+Y +Y+ P+  L  R  N + V + + +DK +
Sbjct: 317 NVARTWCFETGLLNNVILDSELPYNDYYEYYGPDYKLDVRPSNMYNVNTPEYLDKIV 373


>gi|341880749|gb|EGT36684.1| hypothetical protein CAEBREN_09281 [Caenorhabditis brenneri]
          Length = 458

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 267/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++Y+YD ++G+ Y+G  H MKPHR+ MTHHLVL+Y L++ +EI+RP  A   ++ +F
Sbjct: 12  KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRHLEIFRPFPASFEDMTRF 71

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL    PD    F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct: 72  HSDEYMLFLKSANPDNLKQFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 132 RVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+GD FFPGTGD+K++G  +GK Y++NVPL+DGI D S+  +FK +++
Sbjct: 192 YTTDRVMTVSFHKYGD-FFPGTGDLKDVGAGKGKLYSVNVPLRDGITDESYQSIFKPVMT 250

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT  
Sbjct: 251 KVMERFNPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET I +D E+PNE+P N+Y +YF P   L +
Sbjct: 311 NVARCWTYETSIAVDKEVPNELPYNDYFEYFGPHYRLHL 349


>gi|195497353|ref|XP_002096062.1| GE25277 [Drosophila yakuba]
 gi|194182163|gb|EDW95774.1| GE25277 [Drosophila yakuba]
          Length = 438

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTL 343


>gi|332234782|ref|XP_003266581.1| PREDICTED: histone deacetylase 3 [Nomascus leucogenys]
          Length = 428

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 212/365 (58%), Positives = 273/365 (74%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           + YFY+ DV    +   HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VDYFYNSDVLYFLYRAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|366992041|ref|XP_003675786.1| hypothetical protein NCAS_0C04320 [Naumovozyma castellii CBS 4309]
 gi|342301651|emb|CCC69422.1| hypothetical protein NCAS_0C04320 [Naumovozyma castellii CBS 4309]
          Length = 434

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/358 (57%), Positives = 277/358 (77%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +++YFYD DVG+  +G  HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ Q
Sbjct: 18  TKKRVAYFYDADVGNYAYGSGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPATKQEMCQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN 
Sbjct: 78  FHTDEYIDFLSRVTPDNLEMFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL++H RVLYIDIDVHHGDGVEEA
Sbjct: 138 GKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRFHPRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++ G  +GK+YA+NVPL+DGIDD ++  +F+ +I
Sbjct: 198 FYTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYAVNVPLRDGIDDATYRNVFEPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F +P++V GGGGYT 
Sbjct: 257 KRIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMQGHANCVNYVKSFGIPMMVVGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
            NVAR W  ETG+L +  L  E+P N+Y +Y+ P+  L  R  N   V S + +DK +
Sbjct: 317 RNVARTWCFETGLLNNVVLDQELPYNDYYEYYGPDYKLDVRPSNMFNVNSSEYLDKIM 374


>gi|320582857|gb|EFW97074.1| Histone deacetylase [Ogataea parapolymorpha DL-1]
          Length = 509

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/358 (58%), Positives = 276/358 (77%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 17  SKKRVAYFYDSDVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R TPD   +F +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN 
Sbjct: 77  FHTDEYIDFLARATPDNLEMFTKEQAKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 137 GKCDIAINYAGGLHHAKKSEASGFCYVNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK++A+N+PL+DGIDD ++  +F+ +I
Sbjct: 197 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHAVNIPLRDGIDDATYKSIFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            ++++ Y P A+VLQCG DSL+GD+LGCFNLS+ GHA CV FVK FN+P +V GGGGYT 
Sbjct: 256 QRIMDWYQPSAVVLQCGGDSLSGDKLGCFNLSMRGHANCVNFVKSFNVPTMVVGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
            NVAR W  ETG+L +T L  E+P N+Y +YF P+  L  R  N H   S + +++ +
Sbjct: 316 RNVARTWAFETGLLNETLLDAELPFNDYYEYFGPDYKLDVRPSNMHNANSPEYLNRIL 373


>gi|341878060|gb|EGT33995.1| hypothetical protein CAEBREN_00664 [Caenorhabditis brenneri]
          Length = 458

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 267/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++Y+YD ++G+ Y+G  H MKPHR+ MTHHLVL+Y L++ +EI+RP  A   ++ +F
Sbjct: 12  KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRHLEIFRPFPASFEDMTRF 71

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL    PD    F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct: 72  HSDEYMLFLKSANPDNLKQFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 132 RVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+GD FFPGTGD+K++G  +GK Y++NVPL+DGI D S+  +FK +++
Sbjct: 192 YTTDRVMTVSFHKYGD-FFPGTGDLKDVGAGKGKLYSVNVPLRDGITDESYQSIFKPVMT 250

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT  
Sbjct: 251 KVMERFNPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET I +D E+PNE+P N+Y +YF P   L +
Sbjct: 311 NVARCWTYETSIAVDKEVPNELPYNDYFEYFGPHYRLHL 349


>gi|146421288|ref|XP_001486594.1| hypothetical protein PGUG_02265 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 507

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 205/340 (60%), Positives = 266/340 (78%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 16  QKKRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F +E  K+N+G+DCPVF+ LFE+C I  GG ++ A RLN 
Sbjct: 76  FHTDEYIDFLSRVTPDNLDMFAKEQIKFNVGDDCPVFDGLFEYCGISGGGLMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 136 GKCDIAINYAGGLHHAKKLEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG+++++G  +GK++AINVPL+DGIDD S+  +F+ +I
Sbjct: 196 FYTTDRVMTASFHKYGE-FFPGTGELRDVGIGKGKYHAINVPLRDGIDDLSYKSIFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E Y P  +VLQCG DSL+GDRLGCFNLS+ GHA C+ FVK FN+P++V GGGGYT 
Sbjct: 255 QKIMEWYQPSCVVLQCGGDSLSGDRLGCFNLSMAGHANCINFVKSFNIPMMVVGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  E G+L +  LP E+P NEY +Y+ P+  L +
Sbjct: 315 RNVARTWAFEAGLLNNVVLPLELPYNEYYEYYGPDYKLDV 354


>gi|195568434|ref|XP_002102221.1| GD19615 [Drosophila simulans]
 gi|194198148|gb|EDX11724.1| GD19615 [Drosophila simulans]
          Length = 438

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTL 343


>gi|195343663|ref|XP_002038415.1| GM10631 [Drosophila sechellia]
 gi|194133436|gb|EDW54952.1| GM10631 [Drosophila sechellia]
          Length = 438

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTL 343


>gi|24644244|ref|NP_651978.2| histone deacetylase 3 [Drosophila melanogaster]
 gi|7296744|gb|AAF52023.1| histone deacetylase 3 [Drosophila melanogaster]
 gi|16769300|gb|AAL28869.1| LD23745p [Drosophila melanogaster]
 gi|220944926|gb|ACL85006.1| Hdac3-PA [synthetic construct]
 gi|220954688|gb|ACL89887.1| Hdac3-PA [synthetic construct]
 gi|384875342|gb|AFI26263.1| histone deacetylase 3 [Drosophila melanogaster]
          Length = 438

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTL 343


>gi|344229085|gb|EGV60971.1| hypothetical protein CANTEDRAFT_116007 [Candida tenuis ATCC 10573]
 gi|344229086|gb|EGV60972.1| histone deacetylase [Candida tenuis ATCC 10573]
          Length = 468

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 268/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 17  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 76

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN  
Sbjct: 77  HTDEYIDFLSRVTPDNLDLFAKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRG 136

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLY+DIDVHHGDGVEEAF
Sbjct: 137 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYVDIDVHHGDGVEEAF 196

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK +A+NVPL+DGIDD +F  +F+ +I 
Sbjct: 197 YTTDRVMTASFHKYGE-FFPGTGELRDIGVGKGKHHAVNVPLRDGIDDATFKSIFEPVIG 255

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GD+LGCFNLS+ GHA CV ++K F +PL+V GGGGYT  
Sbjct: 256 KIMEWYQPSAVVLQCGGDSLSGDKLGCFNLSMSGHANCVNYMKSFGVPLMVLGGGGYTMR 315

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  E+G+L +  LP+E+P NEY +Y+ P+  L +
Sbjct: 316 NVARTWAFESGLLNNVILPSELPYNEYYEYYGPDYKLDV 354


>gi|302503041|ref|XP_003013481.1| hypothetical protein ARB_00299 [Arthroderma benhamiae CBS 112371]
 gi|291177045|gb|EFE32841.1| hypothetical protein ARB_00299 [Arthroderma benhamiae CBS 112371]
          Length = 675

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/327 (62%), Positives = 261/327 (79%), Gaps = 1/327 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+Y++N PL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKYYSVNFPLRDGIDDVSYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLILGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEY 330
           NVAR W  ETG+L+  +LP E+P N+Y
Sbjct: 317 NVARTWAYETGVLVGNQLPTELPYNDY 343


>gi|154321467|ref|XP_001560049.1| hypothetical protein BC1G_01608 [Botryotinia fuckeliana B05.10]
          Length = 633

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/340 (60%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +++YFYD DVG+  +   HPMKPHR+ + H L+++Y +++KMEIYR   A   E+ Q
Sbjct: 17  TKKRVAYFYDSDVGNYAYVAGHPMKPHRIRLAHSLIMNYGVYQKMEIYRAKPATRHEMTQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 77  FHTDEYIDFLQRVTPDNMDSFAKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINWAGGLHHAKK EASGFCY+ND+VLGI+ELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 137 SKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKKRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD ++  +F+ +I
Sbjct: 197 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKNYAVNFPLRDGIDDVTYKSIFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P AIVLQCG DSL+GDRLGCFNLS+ GHA CV+FVK FN P LV GGGGYT 
Sbjct: 256 QSVMDYYQPEAIVLQCGGDSLSGDRLGCFNLSMRGHANCVQFVKSFNKPTLVLGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ETG+L+  E+   +P NEY +Y+ P+  L +
Sbjct: 316 RNVARTWAFETGVLVGKEMDPVLPYNEYYEYYGPDYELDV 355


>gi|194898753|ref|XP_001978932.1| GG10995 [Drosophila erecta]
 gi|190650635|gb|EDV47890.1| GG10995 [Drosophila erecta]
          Length = 438

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTL 343


>gi|338710739|ref|XP_001916752.2| PREDICTED: histone deacetylase 2-like [Equus caballus]
          Length = 488

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/335 (62%), Positives = 272/335 (81%), Gaps = 1/335 (0%)

Query: 14  DVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLH 73
           D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL 
Sbjct: 19  DIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR 78

Query: 74  RITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAG 133
            I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAG
Sbjct: 79  SIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAG 138

Query: 134 GLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
           GLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVS
Sbjct: 139 GLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198

Query: 194 FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
           FHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A
Sbjct: 199 FHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSA 257

Query: 254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVET 313
           +VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET
Sbjct: 258 VVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYET 317

Query: 314 GILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 318 AVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|363748739|ref|XP_003644587.1| hypothetical protein Ecym_2010 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888220|gb|AET37770.1| Hypothetical protein Ecym_2010 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 433

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/359 (57%), Positives = 277/359 (77%), Gaps = 3/359 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 17  QKKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMCQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN 
Sbjct: 77  FHTDEYIDFLSRVTPDNLDMFQKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 137 GKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++ G  +GK+Y++NVPL+DGIDD ++  +F+ +I
Sbjct: 197 FYTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYSVNVPLRDGIDDATYKSVFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F +P++V GGGGYT 
Sbjct: 256 GKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVKSFGIPMMVVGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFIL 359
            NVAR W  ETG+L +  L  E+P N+Y +Y+ P+  L  R  N   V S + +DK ++
Sbjct: 316 RNVARTWAFETGLLNNIVLDEELPYNDYYEYYGPDYKLDVRPSNMFNVNSPEYLDKVLM 374


>gi|302655723|ref|XP_003019646.1| hypothetical protein TRV_06317 [Trichophyton verrucosum HKI 0517]
 gi|291183382|gb|EFE39001.1| hypothetical protein TRV_06317 [Trichophyton verrucosum HKI 0517]
          Length = 676

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/327 (62%), Positives = 261/327 (79%), Gaps = 1/327 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+Y++N PL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKYYSVNFPLRDGIDDVSYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLILGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEY 330
           NVAR W  ETG+L+  +LP E+P N+Y
Sbjct: 317 NVARTWAYETGVLVGNQLPTELPYNDY 343


>gi|347830984|emb|CCD46681.1| similar to histone deacetylase RpdA/Rpd3 [Botryotinia fuckeliana]
          Length = 633

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/340 (60%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +++YFYD DVG+  +   HPMKPHR+ + H L+++Y +++KMEIYR   A   E+ Q
Sbjct: 17  TKKRVAYFYDSDVGNYAYVAGHPMKPHRIRLAHSLIMNYGVYQKMEIYRAKPATRHEMTQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 77  FHTDEYIDFLQRVTPDNMDSFAKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINWAGGLHHAKK EASGFCY+ND+VLGI+ELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 137 SKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKKRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD ++  +F+ +I
Sbjct: 197 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKNYAVNFPLRDGIDDVTYKSIFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P AIVLQCG DSL+GDRLGCFNLS+ GHA CV+FVK FN P LV GGGGYT 
Sbjct: 256 QSVMDYYQPEAIVLQCGGDSLSGDRLGCFNLSMRGHANCVQFVKSFNKPTLVLGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ETG+L+  E+   +P NEY +Y+ P+  L +
Sbjct: 316 RNVARTWAFETGVLVGKEMDPVLPYNEYYEYYGPDYELDV 355


>gi|302759517|ref|XP_002963181.1| hypothetical protein SELMODRAFT_80012 [Selaginella moellendorffii]
 gi|302799705|ref|XP_002981611.1| hypothetical protein SELMODRAFT_114783 [Selaginella moellendorffii]
 gi|300150777|gb|EFJ17426.1| hypothetical protein SELMODRAFT_114783 [Selaginella moellendorffii]
 gi|300168449|gb|EFJ35052.1| hypothetical protein SELMODRAFT_80012 [Selaginella moellendorffii]
          Length = 410

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 216/341 (63%), Positives = 277/341 (81%), Gaps = 2/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           RSK +++YFYD +VG+ Y+G  HPMKPHR+ MTH L++ Y +H K+E+ +P  A   +L 
Sbjct: 15  RSK-RVAYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLVHYGIHNKLEVLKPLPAKDRDLC 73

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +FH+ DYV FL  ITP+TQH   + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN
Sbjct: 74  RFHADDYVAFLRVITPETQHEHLRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 133

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DIA+NW+GGLHHAKKCEASGFCY+ND+VL ILELLKYHARVLYIDID+HHGDGVEE
Sbjct: 134 HGHSDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKYHARVLYIDIDIHHGDGVEE 193

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD +FPGTGDV+++G  +GK+Y++NVPL DGIDD S+  LFK I
Sbjct: 194 AFYTTDRVMTVSFHKFGD-YFPGTGDVRDMGHAKGKYYSLNVPLNDGIDDESYHSLFKPI 252

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I+KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHA+CV+F++ FN+PLL+ GGGGYT
Sbjct: 253 ITKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIKGHAQCVKFMRSFNVPLLLLGGGGYT 312

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  EL +++P NEY +YF P+ +L +
Sbjct: 313 IRNVARCWCYETAVAVGVELEDKMPYNEYYEYFGPDYTLHV 353


>gi|169595536|ref|XP_001791192.1| hypothetical protein SNOG_00508 [Phaeosphaeria nodorum SN15]
 gi|160701115|gb|EAT92003.2| hypothetical protein SNOG_00508 [Phaeosphaeria nodorum SN15]
          Length = 616

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 203/337 (60%), Positives = 263/337 (78%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+ KMEIYR   A   E+ QFH+
Sbjct: 24  KVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYSKMEIYRAKPASKYEMTQFHT 83

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFLH++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGGT++ A RLN   C
Sbjct: 84  DEYIEFLHKVTPDNMDNFTKEQSKYNVGDDCPVFDGLFEFCGISAGGTMEGAARLNRGKC 143

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 144 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYT 203

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI D ++  +F+ +I  V
Sbjct: 204 TDRVMTVSFHKYGE-YFPGTGELRDIGVGTGKNYSVNFPLRDGITDETYRNIFEPVIEAV 262

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  Y P AIVLQCG DSL+GDRLGCFNLS+DGHA CVR+VK F +P+++ GGGGYT  NV
Sbjct: 263 MTHYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANCVRYVKSFGVPVIILGGGGYTMRNV 322

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  ++  ++P N+Y +YFAP+  L +
Sbjct: 323 ARTWAYETGELVGEKMSKQLPFNDYYEYFAPDYELDV 359


>gi|312371802|gb|EFR19897.1| hypothetical protein AND_21626 [Anopheles darlingi]
          Length = 485

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/317 (64%), Positives = 256/317 (80%), Gaps = 1/317 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNMSEYNK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
            + ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  +I INW GGLHHAKK EASG
Sbjct: 61  HMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG   GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL G
Sbjct: 180 GDLRDIGAGRGKYYAVNIPLRDGMDDESYDSIFVPIISKVMETFQPSAVVLQCGADSLTG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NV+RCWT ET + L  E+ NE+
Sbjct: 240 DRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALGVEIANEL 299

Query: 326 PENEYIKYFAPECSLRI 342
           P N+Y +YF P+  L I
Sbjct: 300 PYNDYFEYFGPDFKLHI 316


>gi|326916047|ref|XP_003204323.1| PREDICTED: histone deacetylase 2-like [Meleagris gallopavo]
          Length = 539

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/335 (62%), Positives = 272/335 (81%), Gaps = 1/335 (0%)

Query: 14  DVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLH 73
           D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL 
Sbjct: 70  DIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR 129

Query: 74  RITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAG 133
            I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAG
Sbjct: 130 SIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAG 189

Query: 134 GLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
           GLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVS
Sbjct: 190 GLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 249

Query: 194 FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
           FHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A
Sbjct: 250 FHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSA 308

Query: 254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVET 313
           +VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET
Sbjct: 309 VVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYET 368

Query: 314 GILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 369 AVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 403


>gi|45201491|ref|NP_987061.1| AGR395Wp [Ashbya gossypii ATCC 10895]
 gi|44986425|gb|AAS54885.1| AGR395Wp [Ashbya gossypii ATCC 10895]
 gi|374110312|gb|AEY99217.1| FAGR395Wp [Ashbya gossypii FDAG1]
          Length = 433

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/358 (57%), Positives = 276/358 (77%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ Q
Sbjct: 17  QKKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKQEMCQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN 
Sbjct: 77  FHTDEYIDFLSRVTPDNLDMFQKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 137 GKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++ G  +GK+Y++NVPL+DGIDD ++  +F+ +I
Sbjct: 197 FYTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYSVNVPLRDGIDDATYKSVFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F +P++V GGGGYT 
Sbjct: 256 GKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVKSFGIPMMVVGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKFI 358
            NVAR W  ETG+L +  L  E+P N+Y +Y+ P+  L  R  N   V S + +DK +
Sbjct: 316 RNVARTWAFETGLLNNVLLDEELPYNDYYEYYGPDYKLDVRPSNMFNVNSPEYLDKVL 373


>gi|344265082|ref|XP_003404616.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 3-like
           [Loxodonta africana]
          Length = 428

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/365 (57%), Positives = 274/365 (75%), Gaps = 6/365 (1%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRV  V  HK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVKFVLXHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
           RCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query: 361 NKQIL 365
           N ++L
Sbjct: 365 NLKML 369


>gi|164662701|ref|XP_001732472.1| hypothetical protein MGL_0247 [Malassezia globosa CBS 7966]
 gi|159106375|gb|EDP45258.1| hypothetical protein MGL_0247 [Malassezia globosa CBS 7966]
          Length = 484

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/342 (60%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ K++Y+YD DVG+  +G  HPMKPHR+ M H+L+L+Y L K MEI RP +A   ++ +
Sbjct: 11  SRSKVAYYYDNDVGNFSYGFGHPMKPHRMRMAHNLILNYGLDKHMEILRPPRATRQQMTK 70

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TP++      + T+Y +GEDCP F+ LFEFC I  GG+I  A R+N+
Sbjct: 71  FHTDEYIDFLSRVTPESAPKLTGDGTRYLIGEDCPAFDGLFEFCTISCGGSIAGANRIND 130

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            L DI +NW+GGLHHAKK EASGFCY ND+VL ILELL+ H+RVLYIDIDVHHGDGVEEA
Sbjct: 131 GLADIVVNWSGGLHHAKKREASGFCYTNDIVLAILELLRTHSRVLYIDIDVHHGDGVEEA 190

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFGD FFPGTGDV++IG ++GK YA+NVPL+DGID  +F  +F+ +I
Sbjct: 191 FYVTDRVMTCSFHKFGD-FFPGTGDVRDIGMKKGKAYAVNVPLRDGIDADTFGSIFRPVI 249

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             +++ + PGA+VLQCGADSLAGD+LGCFNLS+ GHA CV FVK F +P++  GGGGYT 
Sbjct: 250 QHIMDWFRPGAVVLQCGADSLAGDKLGCFNLSMRGHANCVEFVKSFGVPMMCVGGGGYTV 309

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
            NVAR WT ETG+LL  ELP ++P N+YI+YF PE  L +P+
Sbjct: 310 RNVARTWTFETGLLLGKELPVDLPFNDYIQYFGPEYKLDVPS 351


>gi|444323189|ref|XP_004182235.1| hypothetical protein TBLA_0I00560 [Tetrapisispora blattae CBS 6284]
 gi|387515282|emb|CCH62716.1| hypothetical protein TBLA_0I00560 [Tetrapisispora blattae CBS 6284]
          Length = 433

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 203/339 (59%), Positives = 268/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+K MEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKNMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLDMFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFC++ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAINYAGGLHHAKKSEASGFCFLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++ G   GK YA+NVPL+DGIDD ++  +F+ +IS
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDTGVGNGKNYAVNVPLRDGIDDATYRSVFEPVIS 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FN+P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMQGHANCVNFVKSFNIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L +  L +E+P N+Y +Y+ P+  L +
Sbjct: 317 NVARTWCFETGLLNNVILDSELPYNDYYEYYGPDYKLDV 355


>gi|428180036|gb|EKX48905.1| hypothetical protein GUITHDRAFT_68545 [Guillardia theta CCMP2712]
          Length = 412

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/341 (60%), Positives = 268/341 (78%), Gaps = 2/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++YFYD ++G+ Y+GP HPMKPHR+ M H+L+L+Y L++KM+++RP  A   ++ +
Sbjct: 6   GKRRVAYFYDAEIGNFYYGPGHPMKPHRIRMCHNLLLNYRLYEKMDVFRPQPATERDMTK 65

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV+FL  ITP   H   ++L ++N+GEDCPVF+ L++FCQ+ AGG+I  A +LN 
Sbjct: 66  FHADDYVQFLKMITPQNMHDNIKQLQRFNVGEDCPVFDGLYDFCQLSAGGSIGGAVKLNM 125

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEA
Sbjct: 126 QKADIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHQRVLYVDIDIHHGDGVEEA 185

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD K+IG + GK+Y++N PL+DGIDD ++  +F+ ++
Sbjct: 186 FYTTDRVMTVSFHKYGE-YFPGTGDSKDIGAKGGKYYSVNFPLRDGIDDETYKSIFEPVM 244

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG-YT 301
            KV+E Y PGA+ LQCGADSL GDRLG FNLSI GH  CV F+K F  PLLV GGGG YT
Sbjct: 245 RKVMEQYQPGAVFLQCGADSLVGDRLGTFNLSIKGHGRCVEFMKSFGKPLLVVGGGGCYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + LD +L NE+P N+Y +YFAP+  L I
Sbjct: 305 IRNVARCWAYETALALDEQLRNELPYNDYYEYFAPDHHLHI 345


>gi|367053145|ref|XP_003656951.1| histone deacetylase-like protein [Thielavia terrestris NRRL 8126]
 gi|347004216|gb|AEO70615.1| histone deacetylase-like protein [Thielavia terrestris NRRL 8126]
          Length = 643

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/356 (57%), Positives = 270/356 (75%), Gaps = 3/356 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++YD+++ MEIYR   A   E+ QF
Sbjct: 24  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYDIYRFMEIYRAKPAVTSEMTQF 83

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL ++TPD    F +E TKYN+G+DCPVF+ LFEFC I AGG+++ A RLN +
Sbjct: 84  HTDEYIEFLQKVTPDNMDSFMREQTKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRE 143

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 144 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYVDIDVHHGDGVEEAF 203

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+YA+N PL+DGIDD S+  +F+ +I 
Sbjct: 204 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGNGKYYAVNFPLRDGIDDVSYETIFEPVIE 262

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +V+ F LP LV GGGGYT  
Sbjct: 263 AVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVRSFGLPTLVLGGGGYTMR 322

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKF 357
           NVAR W  ETG L+  E+ + +P NEY +Y+ P  E  +R  N     S++ ++K 
Sbjct: 323 NVARTWAYETGRLIGVEMDSVLPYNEYYEYYGPDYELDVRASNMENANSYEYLEKI 378


>gi|195109690|ref|XP_001999416.1| GI24497 [Drosophila mojavensis]
 gi|193916010|gb|EDW14877.1| GI24497 [Drosophila mojavensis]
          Length = 436

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 207/342 (60%), Positives = 268/342 (78%), Gaps = 4/342 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +
Sbjct: 2   SDRRVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAAR 118
           FHS +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A+
Sbjct: 62  FHSDEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQ 121

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LN+   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKY+ RVLYIDIDVHHGDG
Sbjct: 122 KLNHNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYNPRVLYIDIDVHHGDG 181

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           V+EAFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++F
Sbjct: 182 VQEAFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDHSYFQVF 241

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K IIS ++E Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FV+  N+P LV GGG
Sbjct: 242 KPIISAIMEFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVRTLNVPTLVVGGG 301

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           GYT  NVARCWT ET +L+D E+ N++P  EY  +FAP+ +L
Sbjct: 302 GYTLRNVARCWTHETSLLVDQEISNDLPPTEYYDFFAPDFTL 343


>gi|440635253|gb|ELR05172.1| hypothetical protein GMDG_07213 [Geomyces destructans 20631-21]
          Length = 641

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/345 (59%), Positives = 267/345 (77%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K++YFYD DVG+  +   HPMKPHR+ + H L+++Y  +KKMEIYR   A   E+ Q
Sbjct: 18  SKKKVAYFYDSDVGNYAYVAGHPMKPHRIRLAHSLIMNYGTYKKMEIYRAKPATKHEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FL ++TPD    F +E  K+N+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 78  FHTDEYVDFLQKVTPDNMDAFMKEQGKFNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCYIND+VLGI+ELL++ +RVLYIDIDVHHGDGVEEA
Sbjct: 138 GKCDIAVNWAGGLHHAKKSEASGFCYINDIVLGIIELLRFKSRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD S+  +F+ +I
Sbjct: 198 FYTTDRVMTCSFHKYGE-YFPGTGELRDIGVGQGKNYAVNFPLRDGIDDASYKSIFEPVI 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V++ Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV+FVK F LP LV GGGGYT 
Sbjct: 257 SAVMQYYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKFVKSFGLPTLVLGGGGYTM 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NVAR W  ETG+L+  E+   +P NEY +Y+ P+  L + + ++
Sbjct: 317 RNVARTWAYETGLLVGEEMNAVLPFNEYYEYYGPDYELDVRSSNM 361


>gi|50553750|ref|XP_504286.1| YALI0E22935p [Yarrowia lipolytica]
 gi|49650155|emb|CAG79885.1| YALI0E22935p [Yarrowia lipolytica CLIB122]
          Length = 458

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 264/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+K MEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDSDVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKHMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +YV+FL R+TPD    F +E  K+N+G+DCPVF+ LFEFC I  GG+++ A RLN  
Sbjct: 78  HTDEYVDFLSRVTPDNMEHFAKEQAKFNVGDDCPVFDGLFEFCGISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAINWAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+N PL+DGIDDT++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGAGKGKNYAVNFPLRDGIDDTNYKNVFQPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++E Y P  +VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F LP+LV GGGGYT  
Sbjct: 257 AIMEWYQPTVVVLQCGGDSLSGDRLGCFNLSMQGHANCVNYVKSFGLPVLVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R WT ETG+LL+  +  +IP N+Y +Y+ P+  L +
Sbjct: 317 NVSRTWTFETGLLLNKMVGPDIPYNDYYEYYGPDYKLEV 355


>gi|218192528|gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
          Length = 961

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ +PH A   +L +
Sbjct: 20  AKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 258 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHV 357


>gi|409051380|gb|EKM60856.1| hypothetical protein PHACADRAFT_247052 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 541

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/345 (60%), Positives = 270/345 (78%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YF+D DV   ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ Q
Sbjct: 12  QKKRVCYFFDSDVSGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQ 71

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DYV+FL RITP   + F +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+ 
Sbjct: 72  FHSDDYVDFLSRITPVNMNSFVKEQHKYNVGDDCPVFDGLFDYCAISAGGSMEGAARLSR 131

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 132 DKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHPRVLYIDIDVHHGDGVEEA 191

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DG+ D ++  +F+ +I
Sbjct: 192 FYTTDRVMTVSFHKYGE-YFPGTGELRDVGIGKGKYYALNFPLRDGLSDENYKSVFEPVI 250

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+ETY PGAIVLQCG DSL+GD+LGCFN+S+ GHA+CV+FVK F  PLL+ GGGGYT 
Sbjct: 251 QKVMETYDPGAIVLQCGTDSLSGDKLGCFNVSMRGHADCVKFVKSFGKPLLMLGGGGYTM 310

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NV+R W  ETG+    EL ++IP NEY +YF P+  L + + ++
Sbjct: 311 RNVSRAWAYETGLAAGVELGSDIPINEYYEYFGPDYQLDVKSSNM 355


>gi|156053950|ref|XP_001592901.1| hypothetical protein SS1G_05823 [Sclerotinia sclerotiorum 1980]
 gi|154703603|gb|EDO03342.1| hypothetical protein SS1G_05823 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 626

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 204/340 (60%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +++YFYD DVG+  +   HPMKPHR+ + H L+++Y +++KMEIYR   A   E+ Q
Sbjct: 17  TKKRVAYFYDSDVGNYAYVAGHPMKPHRIRLAHSLIMNYGVYQKMEIYRAKPATRHEMTQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 77  FHTDEYIDFLQRVTPDNMDSFAKEQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINWAGGLHHAKK EASGFCY+ND+VLGI+ELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 137 SKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKKRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N PL+DGIDD ++  +F+ +I
Sbjct: 197 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKNYAVNFPLRDGIDDVTYKSIFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P AIVLQCG DSL+GDRLGCFNLS+ GHA CV+FVK FN P LV GGGGYT 
Sbjct: 256 QSVMDYYQPEAIVLQCGGDSLSGDRLGCFNLSMRGHANCVQFVKSFNKPTLVLGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ETG+L+  E+   +P NEY +Y+ P+  L +
Sbjct: 316 RNVARTWAFETGVLVGKEMDPVLPYNEYYEYYGPDYELDV 355


>gi|403213303|emb|CCK67805.1| hypothetical protein KNAG_0A01160 [Kazachstania naganishii CBS
           8797]
          Length = 433

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 202/339 (59%), Positives = 269/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG++++A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLEMFKKESVKFNVGDDCPVFDGLYEYCSISGGGSMESAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +G+ YA+NVPL+DGIDD ++  +F+ ++ 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGQNYAVNVPLRDGIDDATYRSVFEPVVG 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK FN+P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMQGHASCVNYVKSFNIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L +  L  E+P N+Y +Y+ P+  L +
Sbjct: 317 NVARTWCFETGLLNNVVLDAELPYNDYYEYYGPDYKLDV 355


>gi|324509162|gb|ADY43856.1| Histone deacetylase 3 [Ascaris suum]
          Length = 430

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 208/344 (60%), Positives = 265/344 (77%), Gaps = 3/344 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SK ++ Y+Y  DVGS ++GP HPMKP RL   H LV++Y LH +M + +P KA  +E+
Sbjct: 1   MTSKRRVCYYYHPDVGSFHYGPKHPMKPQRLAAIHSLVVNYGLHNEMLVLKPPKASAIEM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DY++FL R++P T   +     ++N+GEDCPVF+ +FEFC I  G ++    RL
Sbjct: 61  ERFHSKDYIDFLQRVSPKTADQYEHLFAQFNIGEDCPVFDGIFEFCSISTGASLSGVSRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+ L DIAINW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+
Sbjct: 121 NHGLSDIAINWSGGLHHAKKREASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ +IG+  G++YA+NVP+K+G+DD ++  LFK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYDIGQDSGRYYAVNVPMKEGMDDENYHSLFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II  V++ + P AIVLQCGADSL  DRLGCFNLS  GH ECV FV+   LP+LV GGGGY
Sbjct: 241 IIRTVIDCFDPSAIVLQCGADSLGCDRLGCFNLSFTGHGECVDFVRSLGLPMLVVGGGGY 300

Query: 301 TKENVARCWTVETGILL--DTELPNEIPEN-EYIKYFAPECSLR 341
           T  NVARCWT ET IL+    E+P+EIP N EY+++FAPE +LR
Sbjct: 301 TLRNVARCWTYETAILVGKKDEIPDEIPNNTEYLQFFAPEFTLR 344


>gi|223942491|gb|ACN25329.1| unknown [Zea mays]
          Length = 439

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 273/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M+++RPH A   +L +
Sbjct: 20  SKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLGRYGLLDQMQVFRPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD++++G  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 258 GKVMEVFNPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYYEYFGPDYTLHV 357


>gi|357467641|ref|XP_003604105.1| Histone deacetylase [Medicago truncatula]
 gi|355493153|gb|AES74356.1| Histone deacetylase [Medicago truncatula]
          Length = 1775

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++++P  A   +L +F
Sbjct: 17  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRF 76

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 77  HADDYVSFLRSITPETQQDHMRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHD 136

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 137 QCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 196

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK +I 
Sbjct: 197 YTTDRVMTVSFHKFGD-YFPGTGDLRDIGYGKGKYYSLNVPLDDGIDDESYHLLFKPLIC 255

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT  
Sbjct: 256 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTIR 315

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +
Sbjct: 316 NVARCWCYETGVALGIEVDDKMPEHEYYEYFGPDYTLHV 354


>gi|3982757|gb|AAC83649.1| histone deacetylase dHDAC3 [Drosophila melanogaster]
          Length = 438

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 268/339 (79%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY++D+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVDDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTL 343


>gi|430812636|emb|CCJ29937.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 359

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/347 (60%), Positives = 270/347 (77%), Gaps = 1/347 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +   ++YFYD D+G+ ++G NHPMKPHR+ MTH LVLSY L+KK+++  P +A   ++
Sbjct: 1   MVTHKSVTYFYDPDIGNYHYGANHPMKPHRMRMTHSLVLSYGLYKKLDMRVPKRATRKDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            + H+ +YV+FL R+TPDT   F    +++N+GEDCPVF+ LFEFC I AGG+I AA+++
Sbjct: 61  TRCHTDEYVDFLWRVTPDTMEKFTLHQSRFNVGEDCPVFDGLFEFCSISAGGSICAAQKI 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N    +IAINW+GGLHHAKK EASGFCYIND+VL ILELLKY+ RVLYIDID+HHGDGVE
Sbjct: 121 NTGDSEIAINWSGGLHHAKKREASGFCYINDIVLAILELLKYNQRVLYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMT SFHK+G+ +FPGTG +++IG  +GK Y++N+PLKDGIDD S+  +FK 
Sbjct: 181 EAFYTTDRVMTCSFHKYGE-YFPGTGSIEDIGIGKGKNYSVNIPLKDGIDDASYESIFKP 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II K++E Y P  +VLQCGADSLAGDRLGCFNLS+ GHAECV+FVK FNLP +  GGGGY
Sbjct: 240 IIQKIMEWYRPNVVVLQCGADSLAGDRLGCFNLSMKGHAECVKFVKSFNLPTIAVGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           T  NVAR WT ET +L++  L   IP N Y+ Y+ PE  L +P+ ++
Sbjct: 300 TIRNVARVWTYETAVLINETLDENIPFNSYLDYYGPEFKLNVPSNNM 346


>gi|242096248|ref|XP_002438614.1| hypothetical protein SORBIDRAFT_10g022820 [Sorghum bicolor]
 gi|241916837|gb|EER89981.1| hypothetical protein SORBIDRAFT_10g022820 [Sorghum bicolor]
          Length = 518

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ RPH A   +L +
Sbjct: 20  SKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLGRYGLLDQMQVLRPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD++++G  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 258 GKVMEVFNPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYYEYFGPDYTLHV 357


>gi|330929408|ref|XP_003302629.1| hypothetical protein PTT_14524 [Pyrenophora teres f. teres 0-1]
 gi|311321879|gb|EFQ89270.1| hypothetical protein PTT_14524 [Pyrenophora teres f. teres 0-1]
          Length = 497

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 203/337 (60%), Positives = 264/337 (78%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+ KMEIYR   A   E+ QFH+
Sbjct: 25  KVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYTKMEIYRAKPASKYEMTQFHT 84

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFLH++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGGT++ A RLN   C
Sbjct: 85  DEYIEFLHKVTPDNMEQFTREQSKYNVGDDCPVFDGLFEFCGISAGGTMEGAARLNRGKC 144

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 145 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYT 204

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI D ++  +F+ +I  V
Sbjct: 205 TDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKNYSVNFPLRDGITDETYRNIFEPVIQAV 263

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P AIVLQCG DSL+GDRLGCFNLS+DGHA CV++VK F +P++V GGGGYT  NV
Sbjct: 264 MDYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANCVKYVKSFGVPVIVLGGGGYTMRNV 323

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  ++  ++P N+Y +YFAP+  L +
Sbjct: 324 ARTWAYETGELVGEKMAKQLPFNDYYEYFAPDYELDV 360


>gi|255717522|ref|XP_002555042.1| KLTH0F19668p [Lachancea thermotolerans]
 gi|238936425|emb|CAR24605.1| KLTH0F19668p [Lachancea thermotolerans CBS 6340]
          Length = 432

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 207/358 (57%), Positives = 277/358 (77%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K++++YFYD DV +  +G +HPMKP R+ M H LV++Y L+KKMEIYR   A   E+ Q
Sbjct: 17  NKERVAYFYDSDVSNYSYGASHPMKPARIRMAHSLVMNYGLYKKMEIYRAKPATKQEMCQ 76

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN 
Sbjct: 77  FHSDEYIDFLSRVTPDNLEMFQKESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNR 136

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 137 GKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEA 196

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++ G  +GK+Y++NVPL+DGIDDT++  +F+ +I
Sbjct: 197 FYTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYSVNVPLRDGIDDTTYKSVFEPVI 255

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F +P+LV GGGGYT 
Sbjct: 256 GKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVKSFGIPMLVVGGGGYTM 315

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
            NVAR W  ETG+L +  L  E+P N+Y +Y+ P  E  +R  N   V + + +DK +
Sbjct: 316 RNVARTWAFETGLLNNVILDQELPYNDYYEYYGPDYELDVRPSNMFNVNTPEYLDKIL 373


>gi|239609746|gb|EEQ86733.1| histone deacetylase RPD3 [Ajellomyces dermatitidis ER-3]
 gi|327357627|gb|EGE86484.1| histone deacetylase RPD3 [Ajellomyces dermatitidis ATCC 18188]
          Length = 675

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 208/358 (58%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPANKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDSYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYAVNFPLRDGIDDISYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 317 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 374


>gi|45382275|ref|NP_990162.1| histone deacetylase 2 [Gallus gallus]
 gi|3023931|sp|P56519.1|HDAC2_CHICK RecName: Full=Histone deacetylase 2; Short=HD2
 gi|2791686|gb|AAB96924.1| histone deacetylase-2 [Gallus gallus]
          Length = 488

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/345 (61%), Positives = 274/345 (79%), Gaps = 1/345 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVS     +  FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSEVSMVN-NFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|453086341|gb|EMF14383.1| Hist_deacetyl-domain-containing protein [Mycosphaerella populorum
           SO2202]
          Length = 676

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/337 (60%), Positives = 262/337 (77%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+KK+EIYR   A   E+ QFH+
Sbjct: 27  KVAYFYDSDVGNYAYNAGHPMKPHRIRMAHSLIMNYGLYKKLEIYRAKPASKYEMTQFHT 86

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL R+TPD    F +E  +YN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 87  DEYVDFLQRVTPDNMDNFMKEQGRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRGKC 146

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGILELL++H RVLYIDIDVHHGDGVEEAFY 
Sbjct: 147 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFHERVLYIDIDVHHGDGVEEAFYS 206

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG  +GK Y++N PL+DGIDD S+  +F+  I  V
Sbjct: 207 TDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKHYSVNFPLRDGIDDASYKGIFEPTIGWV 265

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP LV GGGGYT  NV
Sbjct: 266 MEYYKPTAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTLVLGGGGYTMRNV 325

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  E+  ++P  +Y +Y++P+  L +
Sbjct: 326 ARTWAYETGQLVGVEMGPDLPFTDYYEYYSPDFELDV 362


>gi|320170201|gb|EFW47100.1| histone deacetylase 2 [Capsaspora owczarzaki ATCC 30864]
          Length = 552

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/341 (61%), Positives = 266/341 (78%), Gaps = 2/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ ++ YFYD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L+KKM+IYRPHKA   E+ +
Sbjct: 6   SRRRVCYFYDADIGNYYYGQGHPMKPHRVRMTHNLLLNYGLYKKMDIYRPHKASFEEMTK 65

Query: 63  FHSADYVEFLHRITPDTQHL-FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS +Y+ FL  I  +T      +++ ++N+GEDCPVFE +FE+ Q+ AGG+I  A +LN
Sbjct: 66  FHSDEYIHFLKSINHETSSSDHTRQMQRFNVGEDCPVFEGVFEYSQLSAGGSIGGAVKLN 125

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINW GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDIDVHHGDGVEE
Sbjct: 126 KGDTDIAINWGGGLHHAKKSEASGFCYVNDIVLSILELLKRHQRVLYIDIDVHHGDGVEE 185

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ FFPGTGD+++IG   GK YA+N PL+DGIDD S+  +F+ I
Sbjct: 186 AFYTTDRVMTVSFHKYGE-FFPGTGDLRDIGAGRGKHYALNFPLRDGIDDFSYQNVFQPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V+E Y PGA+VLQCGADSLAGDRLGCFNLS+ GHAECV FV+ FN+P L+ GGGGYT
Sbjct: 245 IRHVMEWYQPGAVVLQCGADSLAGDRLGCFNLSLLGHAECVEFVRSFNVPTLLLGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCWT ET + + T +   +P N+Y +Y++P+  L +
Sbjct: 305 IRNVARCWTYETAVAIGTGIATALPFNDYFEYYSPDFKLEV 345


>gi|224003547|ref|XP_002291445.1| histone deacetylase 1p [Thalassiosira pseudonana CCMP1335]
 gi|220973221|gb|EED91552.1| histone deacetylase 1p [Thalassiosira pseudonana CCMP1335]
          Length = 450

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/338 (60%), Positives = 264/338 (78%), Gaps = 1/338 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD +VG+ ++G  HPMKPHR+ MTH+LV++Y L+K+M+++RP       + +FHS
Sbjct: 26  RVSYFYDAEVGNYHYGQGHPMKPHRVRMTHNLVVNYGLYKQMDVFRPRLIQSNAMTRFHS 85

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ITPD    F ++L ++N+GEDCPVF+ LFEFCQ+Y  G+I  A RLN    
Sbjct: 86  DDYINFLKVITPDNMTDFTRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAARLNEDNA 145

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+ INW+GGLHHAKK EASGFCYIND VL ILELLK H RVLYIDID+HHGDGVEEAFY 
Sbjct: 146 DVVINWSGGLHHAKKAEASGFCYINDCVLAILELLKKHERVLYIDIDIHHGDGVEEAFYS 205

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           T+RVMTVSFHKFG+ +FPGTGDV + G  +GK YAIN PL DG+DD ++  +FK ++SKV
Sbjct: 206 TNRVMTVSFHKFGE-YFPGTGDVLDTGYADGKNYAINFPLNDGMDDEAYHSIFKPVMSKV 264

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E +APGA+VLQCGADSL+GDRLGCFNLS+ GHAECV FV+ FN+P+LV GGGGYT  NV
Sbjct: 265 MEHFAPGAVVLQCGADSLSGDRLGCFNLSVKGHAECVNFVRSFNIPMLVLGGGGYTLRNV 324

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            RCWT ET +++   +   +P N+Y +YF P+ +L +P
Sbjct: 325 PRCWTYETAVVVGEPVNENLPFNDYYEYFGPDYTLHLP 362


>gi|148678165|gb|EDL10112.1| histone deacetylase 3, isoform CRA_c [Mus musculus]
          Length = 361

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 204/330 (61%), Positives = 259/330 (78%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAP 336
           RCWT ET +L++  +  E+P +  I +  P
Sbjct: 305 RCWTYETSLLVEEAISEELPYSGKIHFMMP 334


>gi|261199197|ref|XP_002626000.1| histone deacetylase RpdA [Ajellomyces dermatitidis SLH14081]
 gi|239595152|gb|EEQ77733.1| histone deacetylase RpdA [Ajellomyces dermatitidis SLH14081]
          Length = 675

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 208/358 (58%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPANKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDSYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYAVNFPLRDGIDDISYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 317 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 374


>gi|226490924|ref|NP_001143835.1| uncharacterized protein LOC100276617 [Zea mays]
 gi|195628014|gb|ACG35837.1| hypothetical protein [Zea mays]
          Length = 439

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 273/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M+++RPH A   +L +
Sbjct: 20  SKRRVFYFYDAEVGNYYYGQGHPMKPHRIRMTHALLGRYGLLDQMQVFRPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD++++G  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 258 GKVMEVFNPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYYEYFGPDYTLHV 357


>gi|214027228|gb|ACJ63290.1| histone deacetylase protein [Bursaphelenchus xylophilus]
          Length = 469

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 202/340 (59%), Positives = 268/340 (78%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SY+YD ++G+ Y+G  H MKPHR+ M HHL+L+Y L++ +E+YRP  A   E+ +
Sbjct: 7   SKRRVSYYYDPNIGNYYYGQGHVMKPHRIRMCHHLLLNYGLYRHLEVYRPFPASFEEMTR 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL    PD    F +++ K+N+GEDCPVF+ L+EFCQ+ +GG++ AA +LN 
Sbjct: 67  FHTNDYMQFLQSANPDNLRAFSKQMLKFNVGEDCPVFDGLYEFCQLSSGGSLAAAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEA
Sbjct: 127 QKADIAVNWMGGLHHAKKAEASGFCYTNDIVLGILELLKYHQRVLYVDIDVHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+GD FFPGTGD+ +IG  +G+ Y++NVPL+DGI D ++  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGD-FFPGTGDIHDIGAGKGRNYSVNVPLRDGISDNNYQSIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+ET+ P A+VLQCGADSL GDRLG FNL++ GH ECV+F + +N+PL++ GGGGYT 
Sbjct: 246 TKVMETFNPNAVVLQCGADSLNGDRLGPFNLTLKGHGECVKFFRDYNVPLMLLGGGGYTP 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET I +D ++ +E+P N+Y +YF P   L I
Sbjct: 306 RNVARCWTYETSIAVDMQINDELPYNDYFEYFGPNYRLHI 345


>gi|115468688|ref|NP_001057943.1| Os06g0583400 [Oryza sativa Japonica Group]
 gi|31324093|gb|AAP47171.1| histone deacetylase HDAC1 [Oryza sativa Japonica Group]
 gi|55296516|dbj|BAD68730.1| histone deacetylase HDAC1 [Oryza sativa Japonica Group]
 gi|113595983|dbj|BAF19857.1| Os06g0583400 [Oryza sativa Japonica Group]
 gi|215697033|dbj|BAG91027.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 518

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ +PH A   +L +
Sbjct: 20  AKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 258 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHV 357


>gi|6323999|ref|NP_014069.1| Rpd3p [Saccharomyces cerevisiae S288c]
 gi|417699|sp|P32561.1|RPD3_YEAST RecName: Full=Histone deacetylase RPD3; AltName:
           Full=Transcriptional regulatory protein RPD3
 gi|238962|gb|AAB20328.1| RPD3 [Saccharomyces cerevisiae]
 gi|642338|emb|CAA58228.1| global transcriptional regulator [Saccharomyces cerevisiae]
 gi|1302451|emb|CAA96263.1| RPD3 [Saccharomyces cerevisiae]
 gi|51013077|gb|AAT92832.1| YNL330C [Saccharomyces cerevisiae]
 gi|190409292|gb|EDV12557.1| histone deacetylase [Saccharomyces cerevisiae RM11-1a]
 gi|256269466|gb|EEU04757.1| Rpd3p [Saccharomyces cerevisiae JAY291]
 gi|259149043|emb|CAY82284.1| Rpd3p [Saccharomyces cerevisiae EC1118]
 gi|285814339|tpg|DAA10233.1| TPA: Rpd3p [Saccharomyces cerevisiae S288c]
 gi|323331816|gb|EGA73228.1| Rpd3p [Saccharomyces cerevisiae AWRI796]
 gi|323352804|gb|EGA85106.1| Rpd3p [Saccharomyces cerevisiae VL3]
 gi|365763579|gb|EHN05106.1| Rpd3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392296883|gb|EIW07984.1| Rpd3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 433

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/357 (57%), Positives = 276/357 (77%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPE--CSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+L +  L  ++P NEY +Y+ P+   S+R  N   V + + +DK +
Sbjct: 317 NVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVM 373


>gi|328724942|ref|XP_001946674.2| PREDICTED: histone deacetylase Rpd3-like, partial [Acyrthosiphon
           pisum]
          Length = 461

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 207/339 (61%), Positives = 265/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YFY+ D+ + Y+G  HPMK HR+ MTH+L+L+Y L++KM IY+  KA   E+ QF
Sbjct: 7   KRRVCYFYNSDIENFYYGQGHPMKIHRIRMTHNLLLNYGLYQKMRIYKHQKATAEEMTQF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL  I PD    + +E+ K+NLG+DCPVF+ L+EF Q+ AGG++ AA +LN  
Sbjct: 67  HSDEYIRFLQCILPDNMKKYNKEMQKFNLGDDCPVFDGLYEFSQLSAGGSVAAAIQLNRH 126

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDIDVHHGDGVEEAF
Sbjct: 127 STDICINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDVHHGDGVEEAF 186

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++ +IG  +GK+YA+N+PL DG+DD S+  +F  II+
Sbjct: 187 YITDRVMTVSFHKYGN-YFPGTGELTDIGAGKGKYYAVNIPLGDGMDDDSYESIFVPIIT 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+ET+ P AIVLQCGADSL GDRLGCFNL+I GH +CV FVK + +P+L+ GGGGYT +
Sbjct: 246 KVMETFQPSAIVLQCGADSLTGDRLGCFNLTIKGHGKCVEFVKLYGVPILMVGGGGYTTQ 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+RCWT ET + L  E+ NE+P N+Y KYF P+  L I
Sbjct: 306 NVSRCWTYETAVALGVEISNELPYNDYFKYFLPDSKLHI 344


>gi|195036690|ref|XP_001989801.1| GH18996 [Drosophila grimshawi]
 gi|193893997|gb|EDV92863.1| GH18996 [Drosophila grimshawi]
          Length = 436

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 267/339 (78%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC  Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAKYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKY+ RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYNPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +S +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FV++ N+P LV GGGGYT
Sbjct: 245 VSAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVRQLNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +LLD E+ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLLDQEIDNDLPATEYYDFFAPDFTL 343


>gi|149017362|gb|EDL76413.1| histone deacetylase 3, isoform CRA_a [Rattus norvegicus]
          Length = 408

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 203/330 (61%), Positives = 259/330 (78%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAP 336
           RCWT ET +L++  +  E+P +  + +  P
Sbjct: 305 RCWTYETSLLVEEAISEELPYSGKVHFMMP 334


>gi|355694230|gb|AER99600.1| Histone deacetylase 2 [Mustela putorius furo]
          Length = 426

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 211/329 (64%), Positives = 270/329 (82%), Gaps = 1/329 (0%)

Query: 14  DVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLH 73
           D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL 
Sbjct: 1   DIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR 60

Query: 74  RITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAG 133
            I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAG
Sbjct: 61  SIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAG 120

Query: 134 GLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
           GLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVS
Sbjct: 121 GLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVS 180

Query: 194 FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
           FHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A
Sbjct: 181 FHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSA 239

Query: 254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVET 313
           +VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET
Sbjct: 240 VVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYET 299

Query: 314 GILLDTELPNEIPENEYIKYFAPECSLRI 342
            + LD E+PNE+P N+Y +YF P+  L I
Sbjct: 300 AVALDCEIPNELPYNDYFEYFGPDFKLHI 328


>gi|401624047|gb|EJS42120.1| rpd3p [Saccharomyces arboricola H-6]
          Length = 433

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/357 (57%), Positives = 276/357 (77%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YSTDRVMTCSFHKYGE-FFPGTGELRDIGVGTGKNYAVNVPLRDGIDDATYRAIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPE--CSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+L +  L  ++P NEY +Y+ P+   S+R  N   V + + +DK +
Sbjct: 317 NVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKIM 373


>gi|413954409|gb|AFW87058.1| hypothetical protein ZEAMMB73_086833 [Zea mays]
          Length = 469

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 273/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M+++RPH A   +L +
Sbjct: 20  SKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLGRYGLLDQMQVFRPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD++++G  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 258 GKVMEVFNPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYYEYFGPDYTLHV 357


>gi|406865111|gb|EKD18154.1| histone deacetylase RpdA/Rpd3 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 642

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 203/340 (59%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K++YFYD DVG+  +   HPMKPHR+ + H L+++Y  +K MEIYR   A   E++Q
Sbjct: 39  AKKKVAYFYDSDVGNYAYVAGHPMKPHRIRLAHSLIMNYGTYKHMEIYRAKPASKHEMSQ 98

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+EFL ++TPD    + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 99  FHTDEYIEFLQKVTPDNMESYSKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 158

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 159 GKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKKRVLYIDIDVHHGDGVEEA 218

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG  +G+ YA+N PL+DGIDD ++  +F+ +I
Sbjct: 219 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGQNYAVNFPLRDGIDDVTYKSIFEPVI 277

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+  Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV FVK FNLP LV GGGGYT 
Sbjct: 278 QAVMVNYQPEAVVLQCGGDSLSGDRLGCFNLSMEGHANCVEFVKSFNLPTLVLGGGGYTM 337

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ETGIL+  +L   +P NEY +Y+ P+  L +
Sbjct: 338 RNVARTWAYETGILVGEKLDRTLPYNEYYEYYGPDYELDV 377


>gi|349580624|dbj|GAA25783.1| K7_Rpd3p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 433

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/357 (57%), Positives = 276/357 (77%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPE--CSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+L +  L  ++P NEY +Y+ P+   S+R  N   V + + +DK +
Sbjct: 317 NVARTWCFETGLLNNVILDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVM 373


>gi|151944221|gb|EDN62500.1| histone deacetylase [Saccharomyces cerevisiae YJM789]
          Length = 433

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/357 (57%), Positives = 276/357 (77%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRAVFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPE--CSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+L +  L  ++P NEY +Y+ P+   S+R  N   V + + +DK +
Sbjct: 317 NVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVM 373


>gi|395334095|gb|EJF66471.1| histone deacetylase [Dichomitus squalens LYAD-421 SS1]
          Length = 528

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 201/339 (59%), Positives = 267/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++ YF+D DV   ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E+ QF
Sbjct: 14  RKRVCYFFDSDVSGFHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMTQF 73

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV+FL +ITP   + F +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+  
Sbjct: 74  HSDEYVDFLSKITPSNMNSFIKEQHKYNVGDDCPVFDGLFDYCAISAGGSMEGAARLSRD 133

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 134 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHTRVLYIDIDVHHGDGVEEAF 193

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DG+ + ++  +F+ ++ 
Sbjct: 194 YTTDRVMTVSFHKYGE-YFPGTGELRDVGIGKGKYYALNFPLRDGVTNENYQSVFEPVMR 252

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+E+Y PGA+VLQCG DSL+GD+LGCFNLS+ GHA CV+F+K FN PLL+ GGGGYT  
Sbjct: 253 QVMESYDPGAVVLQCGTDSLSGDKLGCFNLSMRGHANCVQFIKSFNKPLLLVGGGGYTMR 312

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+RCW  ETG+    EL  EIP NEY +YF P+  L +
Sbjct: 313 NVSRCWAYETGLAAGVELGKEIPMNEYYEYFGPDYELDV 351


>gi|207342005|gb|EDZ69903.1| YNL330Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 414

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/355 (57%), Positives = 275/355 (77%), Gaps = 3/355 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QFH+
Sbjct: 1   RVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFHT 60

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN   C
Sbjct: 61  DEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGKC 120

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAFY 
Sbjct: 121 DVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFYT 180

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+DGIDD ++  +F+ +I K+
Sbjct: 181 TDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKI 239

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT  NV
Sbjct: 240 MEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRNV 299

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPE--CSLRIPNGHIVCSFKEIDKFI 358
           AR W  ETG+L +  L  ++P NEY +Y+ P+   S+R  N   V + + +DK +
Sbjct: 300 ARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVM 354


>gi|260815747|ref|XP_002602634.1| hypothetical protein BRAFLDRAFT_281552 [Branchiostoma floridae]
 gi|229287945|gb|EEN58646.1| hypothetical protein BRAFLDRAFT_281552 [Branchiostoma floridae]
          Length = 431

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/340 (62%), Positives = 272/340 (80%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M S   ++YF+D DVG+ ++G  HPMKPHRL +TH LVL Y L+K+M++YRP++A   ++
Sbjct: 1   MGSTKTVAYFFDPDVGNFHYGQGHPMKPHRLALTHSLVLHYGLYKRMQVYRPYRATVHDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DY++FL R+TP     F + L ++N+G+DCPVF  LF FC +Y G T++ A +L
Sbjct: 61  CRFHSEDYIDFLQRVTPQNVQNFTKSLQQFNVGDDCPVFPGLFNFCSMYTGATLEGAVKL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN +CDIA+NWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLY+DID+HHGDGV+
Sbjct: 121 NNNICDIAVNWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ E+G   GK+Y++NVPLKDGIDD ++ +LF  
Sbjct: 181 EAFYLTDRVMTVSFHKYGNHFFPGTGDMYEVGAEGGKYYSLNVPLKDGIDDHNYRQLFNP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           I+ +VVE + P  IVLQCGADSL  DRLGCFNLS+ GH ECV F+K FNLPLLV GGGGY
Sbjct: 241 IMQQVVEFFRPTCIVLQCGADSLGCDRLGCFNLSVKGHGECVSFMKGFNLPLLVLGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ET +LLD E+ NE+P NEY +YF+P+ +L
Sbjct: 301 TVRNVARCWTHETALLLDEEVNNELPYNEYFEYFSPDFTL 340


>gi|325092651|gb|EGC45961.1| histone deacetylase RpdA [Ajellomyces capsulatus H88]
          Length = 679

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/358 (57%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPANKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDSYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI+D S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYSVNFPLRDGIEDVSYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 317 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 374


>gi|452983974|gb|EME83732.1| hypothetical protein MYCFIDRAFT_154253 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 578

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/337 (60%), Positives = 262/337 (77%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+KK+EIYR   A   E+ QFH+
Sbjct: 25  KVAYFYDSDVGNYAYNAGHPMKPHRIRMAHSLIMNYGLYKKLEIYRAKPATKYEMTQFHT 84

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL R+TPD    F +E  +YN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 85  DEYVDFLQRVTPDNMDGFMKEQGRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRGKC 144

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCYIND+VLGILELL++H RVLYIDIDVHHGDGVEEAFY 
Sbjct: 145 DVAVNWAGGLHHAKKSEASGFCYINDIVLGILELLRFHPRVLYIDIDVHHGDGVEEAFYS 204

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+  +F+ +I  V
Sbjct: 205 TDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKNYAVNFPLRDGIDDKSYKGIFEPVIGWV 263

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK FNLP L+ GGGGYT  NV
Sbjct: 264 MEYYKPTAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVKSFNLPTLILGGGGYTMRNV 323

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  E+  ++P  +Y +Y++P+  L +
Sbjct: 324 ARTWAYETGQLVGVEMGPDLPFTDYYEYYSPDFELDV 360


>gi|224131964|ref|XP_002328151.1| histone deacetylase [Populus trichocarpa]
 gi|222837666|gb|EEE76031.1| histone deacetylase [Populus trichocarpa]
          Length = 501

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 17  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 76

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 77  HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHN 136

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 137 LCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEAF 196

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK +I 
Sbjct: 197 YTTDRVMTVSFHKFGD-YFPGTGDVRDIGYSKGKYYSLNVPLDDGIDDESYHFLFKPLIG 255

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA++LQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct: 256 KVMEVFKPGAVILQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 315

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++P++EY +YF P+ +L +
Sbjct: 316 NVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHV 354


>gi|167519939|ref|XP_001744309.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777395|gb|EDQ91012.1| predicted protein [Monosiga brevicollis MX1]
          Length = 399

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/342 (63%), Positives = 268/342 (78%), Gaps = 1/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ +++YF+D DVG+ ++GP HPMKPHRL +TH LVL Y L  KMEI+RP++A P ++ +
Sbjct: 2   SRPRVAYFFDADVGNFHYGPGHPMKPHRLALTHSLVLEYGLWSKMEIFRPYRASPEDMGR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY+ FL R+TPD    F   L ++N+G+DCPVF+ +F+FC IYAG +I+ A +LNN
Sbjct: 62  FHATDYINFLQRVTPDNYRTFGSYLQRFNVGDDCPVFDGIFDFCSIYAGASIEGAVKLNN 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           + CD+AINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVEEA
Sbjct: 122 KQCDVAINWSGGLHHAKKFEASGFCYVNDIVLAILELLKQHPRVLYIDIDIHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G  FFPGTG + E+G   G++YA+NVPLKDGIDD  +  LFK ++
Sbjct: 182 FYTTDRVMTVSFHKYGGHFFPGTGVMYELGAGRGRYYALNVPLKDGIDDMGYNELFKPVM 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+  + P AIVLQCGADSL  DRLGCFNLSI GH  CV F+K FNLPLLV GGGGYT 
Sbjct: 242 REVISKFQPSAIVLQCGADSLGCDRLGCFNLSIAGHGNCVEFIKSFNLPLLVLGGGGYTI 301

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
            NVARCWT ETGILLD  L  ++P N+Y +YF P+  L  PN
Sbjct: 302 RNVARCWTHETGILLDEHLSEDLPYNDYFQYFGPDFKLH-PN 342


>gi|346971694|gb|EGY15146.1| histone deacetylase RPD3 [Verticillium dahliae VdLs.17]
          Length = 635

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 199/340 (58%), Positives = 265/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K++YFYD D+G+  +   HPMKPHR+ + H L++ Y+L KKMEIYR   A   E+ Q
Sbjct: 16  STKKVAYFYDSDIGNYAYPTGHPMKPHRIRLAHSLIMHYNLFKKMEIYRAKPATRGEMTQ 75

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL ++TPD    +++E +K+N+G+DCPVF+ LFEFC I AGG+++ A RLN 
Sbjct: 76  FHTDEYIDFLQKVTPDNMDQYQKEQSKFNVGDDCPVFDGLFEFCGISAGGSMEGAARLNR 135

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q CD+AINWAGGLHHAKK E SGFCY+ND+VLGI+ELL++  RVLYIDIDVHHGDGVEEA
Sbjct: 136 QKCDVAINWAGGLHHAKKSEGSGFCYVNDIVLGIIELLRFMKRVLYIDIDVHHGDGVEEA 195

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG++++IG   GK+Y++N PL+DGI+D S+  +F+ +I
Sbjct: 196 FYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGPGKYYSVNFPLRDGINDQSYKSIFEPVI 254

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V++ Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F LP LV GGGGYT 
Sbjct: 255 EHVMKFYQPEAVVLQCGGDSLSGDRLGCFNLSMEGHANCVSYVKSFGLPTLVLGGGGYTM 314

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ETG+L+   +  ++P NEY +Y+AP+  L +
Sbjct: 315 RNVARTWAFETGVLVGQHMERQLPYNEYYEYYAPDFDLDV 354


>gi|156089631|ref|XP_001612222.1| histone deacetylase [Babesia bovis]
 gi|154799476|gb|EDO08654.1| histone deacetylase [Babesia bovis]
          Length = 449

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/341 (62%), Positives = 263/341 (77%), Gaps = 5/341 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD DVGS Y+GP HPMKP R+ M H LVLSYDL++ ME++RPHKA   EL  FH 
Sbjct: 4   RVSYFYDPDVGSYYYGPGHPMKPQRIRMAHALVLSYDLYRHMEVFRPHKAVEPELLAFHD 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            +Y++FL  ++PD    F  +L ++N+GE  DCPVF+ L+ F Q  +G +ID A RLNNQ
Sbjct: 64  HEYLQFLSGVSPDNYRDFAYQLKRFNVGEATDCPVFDGLYVFQQSCSGASIDGAHRLNNQ 123

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI+INW+GGLHHAK+ EASGFCY+ND+VL ILELLKYHARV+YIDIDVHHGDGVEEAF
Sbjct: 124 QADISINWSGGLHHAKRSEASGFCYLNDIVLAILELLKYHARVMYIDIDVHHGDGVEEAF 183

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T RVMTVSFHKFG+ FFPGTGDV ++G   GK+Y++NVPL DG+DD SF  +F+T++ 
Sbjct: 184 YVTHRVMTVSFHKFGN-FFPGTGDVTDVGVASGKYYSVNVPLNDGMDDESFVDMFRTVVG 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K VE Y PGAIVLQCGADSL GDRLG FNL+  GHA CV F +  N+PLLV GGGGYT  
Sbjct: 243 KCVEVYEPGAIVLQCGADSLTGDRLGRFNLTNKGHAGCVAFCRSLNIPLLVLGGGGYTIR 302

Query: 304 NVARCWTVETGILLD--TELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG++LD   E+  +I  NEY  Y+AP+ +L +
Sbjct: 303 NVARCWAYETGVVLDKHNEMAEQISLNEYYDYYAPDFNLHL 343


>gi|195444867|ref|XP_002070066.1| GK11850 [Drosophila willistoni]
 gi|194166151|gb|EDW81052.1| GK11850 [Drosophila willistoni]
          Length = 442

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 267/339 (78%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y L KKM+IYRP+KA   ++ +FHS
Sbjct: 6   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLDKKMKIYRPYKASAQDMLRFHS 65

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 66  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 125

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 126 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 185

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ E+G   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 186 AFYLTDRVMTASFHKYGNYFFPGTGDMYELGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 245

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 246 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVKELNVPTLVVGGGGYT 305

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L
Sbjct: 306 LRNVARCWTHETSLLVDQDIANDLPPTEYYDFFAPDFTL 344


>gi|225562715|gb|EEH10994.1| histone deacetylase [Ajellomyces capsulatus G186AR]
          Length = 683

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/358 (57%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPANKFEMTQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 78  HTDEYIDFLAKVTPDNMDSYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 138 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI+D S+  +F+ +I 
Sbjct: 198 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYSVNFPLRDGIEDVSYKGIFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 257 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 317 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 374


>gi|55296517|dbj|BAD68731.1| putative histone deacetylase HDAC1 [Oryza sativa Japonica Group]
 gi|215695542|dbj|BAG90733.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 460

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ +PH A   +L +
Sbjct: 20  AKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 258 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHV 357


>gi|422293900|gb|EKU21200.1| histone deacetylase 1/2 [Nannochloropsis gaditana CCMP526]
          Length = 437

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/341 (61%), Positives = 262/341 (76%), Gaps = 1/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +ISYFYD D+G+ ++G  HPMKPHR+ MTH LV+ Y L++ MEI RP      E+ +
Sbjct: 5   TKRRISYFYDSDIGNFHYGQGHPMKPHRVRMTHSLVVYYWLYRNMEILRPKPVLLSEMTR 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  ITPD    + ++L ++N+GEDCPVF+ LFEFCQ+Y  G+I  A  LN 
Sbjct: 65  FHSDDYINFLRVITPDNMQEYMRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAALLNQ 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DI INW+GGLHHAKK EASGFCY+ND VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 125 KEADIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKHHHRVLYIDIDIHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFG+ +FPGTGDV + G   GK YAIN PL DG+DD SF  +F+ +I
Sbjct: 185 FYTTDRVMTVSFHKFGE-YFPGTGDVSDFGHGNGKNYAINFPLHDGMDDESFVSVFRPVI 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+ET+APGAIVLQCGADSL+GDRLGCFNLS+ GHA+ V FVK F++P+L  GGGGYT 
Sbjct: 244 GKVMETFAPGAIVLQCGADSLSGDRLGCFNLSLKGHADAVAFVKSFDVPVLALGGGGYTL 303

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            NV RCW  ET +L  TE+ +++P ++Y +Y+ P+  L +P
Sbjct: 304 RNVPRCWVYETSVLQGTEIKDDLPFHDYFEYYGPDYKLHLP 344


>gi|401842017|gb|EJT44310.1| RPD3-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 433

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 200/339 (58%), Positives = 266/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct: 18  KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct: 78  HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+DGIDD ++  +F+ +I 
Sbjct: 198 YSTDRVMTCSFHKYGE-FFPGTGELRDIGVGTGKNYAVNVPLRDGIDDATYRSVFEPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG DSL+GDRLGCFNLS++GH  CV +VK F +P++V GGGGYT  
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHGNCVNYVKSFGIPMMVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG+L +  L  ++P NEY +Y+ P+  L +
Sbjct: 317 NVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSV 355


>gi|356497518|ref|XP_003517607.1| PREDICTED: histone deacetylase 19-like [Glycine max]
          Length = 497

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/339 (63%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SYFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPMAAKDRDLCKF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           +CDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 VCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGYAKGKYYSLNVPLDDGIDDESYQSLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + L  EL +++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCFETSVALGIELDDKMPQHEYYEYFGPDYTLHV 353


>gi|326432769|gb|EGD78339.1| histone deacetylase 3 [Salpingoeca sp. ATCC 50818]
          Length = 419

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/340 (61%), Positives = 261/340 (76%), Gaps = 5/340 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SK  ++YF+D DV + ++G  HPMKPHRL +TH LVL+Y LH+KM++YRP++A   ++
Sbjct: 1   MASKPVVAYFHDEDVANFHYGQRHPMKPHRLALTHSLVLNYGLHEKMQVYRPYRATADDI 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
             FHS DYV +L R T      F         G DCP+FE LF+FC +Y G +++ AR+L
Sbjct: 61  GMFHSKDYVRYLQRPTLKDGSKFL-----IGTGHDCPLFEGLFDFCSMYTGASLEGARKL 115

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N++ CDIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGVE
Sbjct: 116 NHKQCDIAINWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVE 175

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAF+ TDRVMTVSFHKFGD FFPGTG++ EIGE  GK+Y++NVPLK+GID  ++ R+FK 
Sbjct: 176 EAFFTTDRVMTVSFHKFGDQFFPGTGNIFEIGEGRGKYYSVNVPLKNGIDGDTYLRIFKP 235

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
            ++KV+E Y P AIVLQCGADSL  DRLGCFN++I+ H  CV F+K FNLP L+ GGGGY
Sbjct: 236 TMTKVIERYQPSAIVLQCGADSLGLDRLGCFNMTIESHGACVDFIKSFNLPTLILGGGGY 295

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCWT ETG+L+  EL NEIP  EY  +F P+ SL
Sbjct: 296 TIRNVARCWTYETGLLVGAELSNEIPFGEYFPFFGPDFSL 335


>gi|2661170|gb|AAB88240.1| RPD3-2A [Homo sapiens]
          Length = 429

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/358 (58%), Positives = 270/358 (75%), Gaps = 6/358 (1%)

Query: 14  DVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLH 73
           D+   ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS DY++FL 
Sbjct: 13  DMCRFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQ 72

Query: 74  RITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAG 133
           R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAG
Sbjct: 73  RVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAG 132

Query: 134 GLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
           GLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVS
Sbjct: 133 GLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVS 192

Query: 194 FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
           FHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  
Sbjct: 193 FHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTC 252

Query: 254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVET 313
           IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET
Sbjct: 253 IVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYET 312

Query: 314 GILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILFNKQIL 365
            +L++  +  E+P +EY +YFAP+ +L      RI N +      +I + I  N ++L
Sbjct: 313 SLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKML 370


>gi|407919962|gb|EKG13181.1| Histone deacetylase superfamily [Macrophomina phaseolina MS6]
          Length = 691

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/354 (58%), Positives = 268/354 (75%), Gaps = 3/354 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+KK+EIYR   A   E+ QFH+
Sbjct: 22  KVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYKKLEIYRAKPASKFEMTQFHT 81

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL ++TPD    F +E +K+N+G+DCPVF+ LFE+C I AGG+++ A RLN   C
Sbjct: 82  DEYVDFLQKVTPDNMDNFAKEQSKFNVGDDCPVFDGLFEYCGISAGGSMEGAARLNRGKC 141

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL++  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 142 DVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFKQRVLYIDIDVHHGDGVEEAFYT 201

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGI D ++  +F+ +I  V
Sbjct: 202 TDRVMTVSFHKYGE-YFPGTGELRDIGVGNGKHYAVNFPLRDGITDETYKGIFEPVIKAV 260

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG DSL+GDRLG FNLS+ GHA CVRFVK FNLP LV GGGGYT  NV
Sbjct: 261 MDWYRPEAVVLQCGGDSLSGDRLGAFNLSMRGHANCVRFVKSFNLPTLVLGGGGYTMRNV 320

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKF 357
           AR W  ETG L+ +EL  ++P N+Y  YFAP  E  +R  N     S + +DK 
Sbjct: 321 ARTWAYETGQLVGSELGPQLPYNDYFDYFAPDFELDVRPSNMDNANSPEYLDKI 374


>gi|449453634|ref|XP_004144561.1| PREDICTED: histone deacetylase 19-like [Cucumis sativus]
          Length = 465

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/339 (62%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SYFYD ++G+ Y+G  HPMKPHR+ MTH L+  Y L + M++++P  A   +L +F
Sbjct: 16  KRKVSYFYDPEIGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVFKPTLAKDKDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVSFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHN 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 QCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  ++ N++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGMDVDNKMPQHEYYEYFGPDYTLHV 353


>gi|358343881|ref|XP_003636024.1| Histone deacetylase [Medicago truncatula]
 gi|355501959|gb|AES83162.1| Histone deacetylase [Medicago truncatula]
          Length = 591

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/339 (63%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K KISYFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 115 KRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVVKPTAAKDRDLCKF 174

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 175 HADDYVAFLRGITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLNHG 234

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           +CDIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 235 ICDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIHHGDGVEEAF 294

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK ++ 
Sbjct: 295 YTTDRVMTVSFHKFGD-YFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPLMG 353

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ FN+PLL+ GGGGYT  
Sbjct: 354 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFNVPLLLLGGGGYTIR 413

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  EL +++P++EY +YF P+ +L +
Sbjct: 414 NVARCWCYETGVALGIELDDKMPQHEYYEYFGPDYALHV 452


>gi|255540545|ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
 gi|223550452|gb|EEF51939.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
          Length = 468

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/341 (60%), Positives = 265/341 (77%), Gaps = 3/341 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G+ Y+G  HPMKPHR+ M H+L++ Y LH++MEI RP  A  +++ +F
Sbjct: 19  KRRVTYFYEPTIGNYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPASTIDIRKF 78

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS DYV+FL  ++P++       + L ++N+GEDCPVF+ LF FCQ  AGG++ AA +LN
Sbjct: 79  HSDDYVDFLSSVSPESLADPAHNRHLKRFNVGEDCPVFDGLFGFCQASAGGSMGAAVKLN 138

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGVEE
Sbjct: 139 RGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 198

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTG +K+ G  +GK YA+N+PL DG+DD SF  LF+ I
Sbjct: 199 AFYTTDRVMTVSFHKFGD-FFPGTGHIKDTGAGQGKNYALNIPLNDGMDDVSFRALFRPI 257

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL GDRLGCFNLS+ GHA+C+RF++ FN+PL+V GGGGYT
Sbjct: 258 IQKVMEVYQPDAVVLQCGADSLTGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 317

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  E  N++P NEY +YF P+ +L I
Sbjct: 318 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHI 358


>gi|189209233|ref|XP_001940949.1| histone deacetylase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977042|gb|EDU43668.1| histone deacetylase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 618

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 203/341 (59%), Positives = 264/341 (77%), Gaps = 5/341 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIY----RPHKAYPVELA 61
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+ KMEIY    R   A   E+ 
Sbjct: 20  KVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMNYGLYTKMEIYVEAQRAKPASKYEMT 79

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFH+ +Y+EFLH++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGGT++ A RLN
Sbjct: 80  QFHTDEYIEFLHKVTPDNMEQFTREQSKYNVGDDCPVFDGLFEFCGISAGGTMEGAARLN 139

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CD+A+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEE
Sbjct: 140 RGKCDVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEE 199

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI D ++  +F+ +
Sbjct: 200 AFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKNYSVNFPLRDGITDETYRNIFEPV 258

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V++ Y P AIVLQCG DSL+GDRLGCFNLS+DGHA CV++VK F +P++V GGGGYT
Sbjct: 259 IQAVMDYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANCVKYVKSFGVPVIVLGGGGYT 318

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETG L+  ++  ++P N+Y +YFAP+  L +
Sbjct: 319 MRNVARTWAYETGELVGEKMAKQLPFNDYYEYFAPDYELDV 359


>gi|295661282|ref|XP_002791196.1| histone deacetylase RPD3 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226280758|gb|EEH36324.1| histone deacetylase RPD3 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 691

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/358 (57%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIY P  A   E+ QF
Sbjct: 19  RKRVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIYVPKPANKFEMTQF 78

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 79  HTDEYIDFLAKVTPDNMDSYVKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 138

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 139 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 198

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGI+D S+  +F+ +I 
Sbjct: 199 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYAVNFPLRDGIEDISYKGIFEPVIK 257

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 258 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 317

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 318 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 375


>gi|196008157|ref|XP_002113944.1| hypothetical protein TRIADDRAFT_57882 [Trichoplax adhaerens]
 gi|190582963|gb|EDV23034.1| hypothetical protein TRIADDRAFT_57882 [Trichoplax adhaerens]
          Length = 437

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/341 (61%), Positives = 261/341 (76%), Gaps = 1/341 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K  + YFYD +VG+ ++G  HPMKPHR+ +T+ LVLS+ LHKKM ++R   A    L
Sbjct: 1   MGPKRDVMYFYDPEVGNFHYGKGHPMKPHRISLTNSLVLSFGLHKKMTMFRSIPASDFNL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFR-QELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
            +FH+ DY+EFL +ITP     F    L  YN+G+DCPVF  LF+FC +Y G ++  A +
Sbjct: 61  CRFHAYDYIEFLKKITPANIREFPYSTLNTYNVGDDCPVFGGLFDFCAMYTGASLQGATK 120

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           +N+Q CDIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYHARVLYIDIDVHHGDGV
Sbjct: 121 INHQECDIAINWSGGLHHAKKREASGFCYVNDIVVAILELLKYHARVLYIDIDVHHGDGV 180

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           +EAFY TDRVMTVSFHK+GD FFPGTGD+ EIG   GK+Y+INVPLKDGIDD  +  +FK
Sbjct: 181 QEAFYLTDRVMTVSFHKYGDQFFPGTGDMYEIGTDRGKYYSINVPLKDGIDDHGYLYVFK 240

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +I  V++ Y P +IVLQCGADSL  DRLGCFNLSI  H  CV+FVK FN+P LV GGGG
Sbjct: 241 PVIEAVIQHYQPSSIVLQCGADSLGCDRLGCFNLSIKAHGACVQFVKSFNIPTLVLGGGG 300

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           YT  NV+RCW  ET +L+D ++ N++P  EY++YFAP+ SL
Sbjct: 301 YTISNVSRCWCYETALLVDADITNDLPYTEYLEYFAPDFSL 341


>gi|224135913|ref|XP_002322192.1| histone deacetylase [Populus trichocarpa]
 gi|222869188|gb|EEF06319.1| histone deacetylase [Populus trichocarpa]
          Length = 435

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/341 (60%), Positives = 266/341 (78%), Gaps = 3/341 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  Y+G  HPMKPHR+ M H+L++ Y LH++MEI RP  A P ++ +F
Sbjct: 19  KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYALHRRMEINRPFPAGPTDIRKF 78

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS +YVEFL  ++P +     F ++L ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN
Sbjct: 79  HSDEYVEFLSSVSPQSVGDPAFGRQLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 138

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGVEE
Sbjct: 139 RGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 198

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+GD FFPGTG +K+ G  +GK YA+N+PL DG+DD +F  LF+ +
Sbjct: 199 AFYTTDRVMTVSFHKYGD-FFPGTGHIKDTGAGQGKSYALNIPLNDGMDDENFRGLFRPL 257

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT
Sbjct: 258 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYT 317

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  E  N++P NEY +YF P+ +L +
Sbjct: 318 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHV 358


>gi|225428370|ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
          Length = 502

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/339 (63%), Positives = 274/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SYFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK II 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGFGKGKYYSLNVPLDDGIDDESYHFLFKPIIG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHV 353


>gi|449267276|gb|EMC78242.1| Histone deacetylase 3, partial [Columba livia]
          Length = 410

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/351 (59%), Positives = 267/351 (76%), Gaps = 6/351 (1%)

Query: 21  GPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQ 80
           G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS DY++FL R++P+  
Sbjct: 1   GAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNM 60

Query: 81  HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 140
             F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK
Sbjct: 61  QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKK 120

Query: 141 CEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
            EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ 
Sbjct: 121 FEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNY 180

Query: 201 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 260
           FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGA
Sbjct: 181 FFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGA 240

Query: 261 DSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 320
           DSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  
Sbjct: 241 DSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEA 300

Query: 321 LPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILFNKQIL 365
           +  E+P +EY +YFAP+ +L      RI N +      +I + I  N ++L
Sbjct: 301 ISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKML 351


>gi|328709501|ref|XP_001943175.2| PREDICTED: histone deacetylase Rpd3-like [Acyrthosiphon pisum]
          Length = 482

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 264/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++  FY+ D+ + Y+G  HPMK HR+ MTH+L+L+Y L++KM IY   KA   E+ QF
Sbjct: 7   KRRVCNFYNSDIENFYYGQGHPMKIHRIRMTHNLLLNYGLYQKMRIYTHQKATAEEMTQF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL  I PD    + +E+ K+NLG+DCPVF+ L+EF Q+ AGG++ AA +LN  
Sbjct: 67  HSDEYIRFLQCILPDNMKKYNKEMQKFNLGDDCPVFDGLYEFSQLSAGGSVAAAIQLNRH 126

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDIDVHHGDGVEEAF
Sbjct: 127 STDICINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDVHHGDGVEEAF 186

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++ +IG  +GK+YA+N+PL DG+DD S+  +F  II+
Sbjct: 187 YITDRVMTVSFHKYGN-YFPGTGELTDIGAGKGKYYAVNIPLGDGMDDDSYESIFVPIIT 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+ET+ P AIVLQCGADSL GDRLGCFNL+I GH +CV FVK++ +P+L+ GGGGYT +
Sbjct: 246 KVMETFQPSAIVLQCGADSLTGDRLGCFNLTIKGHGKCVEFVKRYGVPILMVGGGGYTTQ 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 306 NVSRCWTYETAVALGVEISNELPYNDYFEYFLPDSKLHI 344


>gi|452844829|gb|EME46763.1| histone deacetylase rpd3-like protein [Dothistroma septosporum
           NZE10]
          Length = 669

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 204/337 (60%), Positives = 259/337 (76%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+KK+EIYR   A   E+ QFH+
Sbjct: 26  KVAYFYDSDVGNYAYNAGHPMKPHRIRMAHSLIMNYGLYKKLEIYRAKPASKYEMTQFHT 85

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL R+TPD    F +E  +YN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 86  DEYVDFLQRVTPDNMDSFMKEQGRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRGKC 145

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+AINWAGGLHHAKK EASGFCYIND+VLGILELL++H RVLYIDIDVHHGDGVEEAFY 
Sbjct: 146 DVAINWAGGLHHAKKSEASGFCYINDIVLGILELLRFHPRVLYIDIDVHHGDGVEEAFYS 205

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+  +F+  I  V
Sbjct: 206 TDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKNYAVNFPLRDGIDDNSYKTIFEPTIGWV 264

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +VK F  P L+ GGGGYT  NV
Sbjct: 265 MEYYQPTAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVKSFGKPTLILGGGGYTMRNV 324

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  E+  ++P  +Y +Y++P+  L +
Sbjct: 325 ARTWAYETGQLVGVEMGPDLPFTDYYEYYSPDFELDV 361


>gi|224104785|ref|XP_002313564.1| histone deacetylase [Populus trichocarpa]
 gi|118486921|gb|ABK95294.1| unknown [Populus trichocarpa]
 gi|222849972|gb|EEE87519.1| histone deacetylase [Populus trichocarpa]
          Length = 499

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/339 (62%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 17  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 76

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 77  HADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHN 136

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 137 LCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEAF 196

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK +I 
Sbjct: 197 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGFSKGKYYSLNVPLDDGIDDESYHFLFKPLIG 255

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ FN+PLL+ GGGGYT  
Sbjct: 256 KVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFNVPLLLLGGGGYTIR 315

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++P++EY +YF P+ +L +
Sbjct: 316 NVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHV 354


>gi|392571343|gb|EIW64515.1| histone deacetylase [Trametes versicolor FP-101664 SS1]
          Length = 538

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 204/345 (59%), Positives = 269/345 (77%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YF+D DV   ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E+ Q
Sbjct: 12  QKKRVCYFFDSDVSGFHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMTQ 71

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV+FL +ITP   + F +E  K N+G+DCPVF+ LF++C I AGG+++ A RL+ 
Sbjct: 72  FHSDEYVDFLSKITPVNMNSFIKEQHKCNVGDDCPVFDGLFDYCAISAGGSMEGAARLSR 131

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 132 DKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHPRVLYIDIDVHHGDGVEEA 191

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DGI + ++  +F+ +I
Sbjct: 192 FYTTDRVMTVSFHKYGE-YFPGTGELRDVGIGKGKYYALNFPLRDGITNENYKSVFEPVI 250

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+E+Y PGA+VLQCG DSL+GD+LGCFNLS+ GHA CV+FVK FN PLL+ GGGGYT 
Sbjct: 251 QQVMESYDPGAVVLQCGTDSLSGDKLGCFNLSMRGHANCVKFVKSFNKPLLLVGGGGYTM 310

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NV+RCW  ETG+    EL  EIP NEY +YF P+  L + + ++
Sbjct: 311 RNVSRCWAYETGLAAGVELGKEIPMNEYYEYFGPDYELDVKSSNM 355


>gi|359488210|ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
 gi|296087188|emb|CBI33562.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/339 (63%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SYFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPCPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 FCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK II 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGFGKGKYYSLNVPLDDGIDDESYHCLFKPIIG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHV 353


>gi|242060952|ref|XP_002451765.1| hypothetical protein SORBIDRAFT_04g007470 [Sorghum bicolor]
 gi|241931596|gb|EES04741.1| hypothetical protein SORBIDRAFT_04g007470 [Sorghum bicolor]
          Length = 517

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/340 (62%), Positives = 271/340 (79%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YFYD DVG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++YRP+ A   +L +
Sbjct: 21  QKRRVCYFYDSDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY+ FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAG ++  A +LN+
Sbjct: 81  FHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAVKLNH 140

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEA
Sbjct: 141 GH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT 
Sbjct: 259 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 319 RNVARCWCYETGVALGQELEDKMPVNEYYEYFGPDYTLHV 358


>gi|171695628|ref|XP_001912738.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948056|emb|CAP60220.1| unnamed protein product [Podospora anserina S mat+]
          Length = 783

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 203/344 (59%), Positives = 265/344 (77%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y+++K +EIYR   A   E+ QF
Sbjct: 176 KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYNVYKFLEIYRAKPAVTSEMTQF 235

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN +
Sbjct: 236 HTDEYIEFLQKVTPDNMDSFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRE 295

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 296 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYIDIDVHHGDGVEEAF 355

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD ++  +F+ +I+
Sbjct: 356 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGTGKHYAVNFPLRDGIDDVAYETIFEPVIT 414

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FV+ FNLP LV GGGGYT  
Sbjct: 415 NVMQYYQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVRGFNLPTLVLGGGGYTMR 474

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVAR W  ETG L+  E+   +P NEY +Y+ P+  L + N ++
Sbjct: 475 NVARTWAYETGRLVGVEMDRVLPFNEYYEYYGPDYELDVRNSNM 518


>gi|393218816|gb|EJD04304.1| hypothetical protein FOMMEDRAFT_81600 [Fomitiporia mediterranea
           MF3/22]
          Length = 592

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/344 (59%), Positives = 267/344 (77%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D DVG  ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ QF
Sbjct: 9   KKRVCYFFDPDVGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATEREMTQF 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV+FL R+TP     F +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+  
Sbjct: 69  HSDEYVKFLKRVTPANMSSFVKEQHKYNVGDDCPVFDGLFDYCSISAGGSMEGAARLSRD 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 129 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHNRVLYIDIDVHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+V++IG   G+ +++N PL+DGI + ++  +F+ +I+
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGEVRDIGIGRGRGHSVNFPLRDGITNENYKAIFEPVIN 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+  Y PGAIVLQCG DSL+GD+LGCFNLS+ GHA CV+FVK FN PLL+ GGGGYT  
Sbjct: 248 EVMRVYDPGAIVLQCGTDSLSGDKLGCFNLSMRGHANCVKFVKSFNKPLLMLGGGGYTMR 307

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NV+R W  ETG+    EL +EIP NEY +YF P+  L + + ++
Sbjct: 308 NVSRAWAYETGLAAGVELGSEIPVNEYYEYFGPDYKLDVRSSNM 351


>gi|313217502|emb|CBY38585.1| unnamed protein product [Oikopleura dioica]
 gi|313225015|emb|CBY20808.1| unnamed protein product [Oikopleura dioica]
          Length = 450

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/365 (58%), Positives = 281/365 (76%), Gaps = 7/365 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + K+ Y+YD DVG+ Y+G  HPMKPHR+ MTH+L+++Y L++KMEI+RP K    ++ +F
Sbjct: 8   RRKVCYYYDSDVGNYYYGQGHPMKPHRIRMTHNLLVNYGLYRKMEIFRPAKTSAEDMTKF 67

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL  I PD  + + + + ++N+GEDCPVF+ LFEFCQI AGG+I  A +LN  
Sbjct: 68  HSDDYIKFLKNIRPDNMNDYTKSMQRFNVGEDCPVFDGLFEFCQISAGGSIAGAVKLNRS 127

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLYIDID+HHGDGVEEAF
Sbjct: 128 QTDVAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKHHQRVLYIDIDIHHGDGVEEAF 187

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+K+IG  +GK+Y++N PL+DG+DD SF +LF+T + 
Sbjct: 188 YTTDRVMTVSFHKYGE-YFPGTGDLKDIGANKGKYYSLNFPLRDGMDDDSFIQLFQTTLG 246

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P AIVLQCGADSL  DRLGCFNL++ GHA+CV ++ KFN PLL+ GGGGYT  
Sbjct: 247 KVMERYQPSAIVLQCGADSLTQDRLGCFNLTLKGHAKCVEYMLKFNKPLLLLGGGGYTIR 306

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP--NGHIVCSFKEIDKFILFN 361
           NVARCWT ET   L  E+ N++P N+Y +YF P+  L I   N     S++ +DK    N
Sbjct: 307 NVARCWTYETATALGEEIANDLPYNDYFEYFGPDFKLHIQPNNSENKNSYEYLDK----N 362

Query: 362 KQILY 366
           K+ L+
Sbjct: 363 KEKLF 367


>gi|356551138|ref|XP_003543935.1| PREDICTED: histone deacetylase 19-like [Glycine max]
          Length = 497

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++++P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHD 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 QCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK II 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHFLFKPIIG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHV 353


>gi|195391976|ref|XP_002054635.1| GJ24563 [Drosophila virilis]
 gi|194152721|gb|EDW68155.1| GJ24563 [Drosophila virilis]
          Length = 436

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 266/339 (78%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ +VG+ ++G  HPMKP RL +TH LV++Y L KKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNANVGNFHYGAGHPMKPQRLAVTHSLVMNYGLDKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HHHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FV+  N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVRGLNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D E+ N++P  EY  +FAP+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQEIANDLPVTEYYDFFAPDFTL 343


>gi|340924040|gb|EGS18943.1| histone deacetylase-like protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 681

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 202/344 (58%), Positives = 263/344 (76%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y+++K MEIYR   A   E+ QF
Sbjct: 24  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYNVYKFMEIYRAKPAVTSEMTQF 83

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 84  HTDEYIEFLQKVTPDNMDSFVREQAKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 143

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 144 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYVDIDVHHGDGVEEAF 203

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+YA+N PL+DGIDD S+  +F+ +IS
Sbjct: 204 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGAGKYYAVNFPLRDGIDDVSYKTIFEPVIS 262

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +V+ F LP LV GGGGYT  
Sbjct: 263 AVMQYYQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVRSFGLPTLVLGGGGYTMR 322

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVAR W  ETG L+  E+   +P NEY  Y+ P+  L + + ++
Sbjct: 323 NVARTWAYETGRLVGVEMDPVLPYNEYYDYYGPDYELDVRSSNM 366


>gi|56968271|gb|AAW32178.1| histone deacetylase [Yarrowia lipolytica]
          Length = 441

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 263/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+K MEIYR   A   E+ QF
Sbjct: 18  KKRVAYFYDSDVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKHMEIYRAKPATKQEMCQF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +YV+FL R+TPD    F +E  K+N+G+DCPVF+ LFEFC I  GG+++ A RLN  
Sbjct: 78  HTDEYVDFLSRVTPDNMEHFAKEQAKFNVGDDCPVFDGLFEFCGISGGGSMEGAARLNRG 137

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDIAINWAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+N PL+DGIDDT++  +F+ +I 
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGAGKGKNYAVNFPLRDGIDDTNYKNVFQPVIK 256

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++E Y P  +VLQCG DSL+G+ LGCFNLS+ GHA CV +VK F LP+LV GGGGYT  
Sbjct: 257 AIMEWYQPTVVVLQCGGDSLSGEGLGCFNLSMQGHANCVNYVKSFGLPVLVVGGGGYTMR 316

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R WT ETG+LL+  +  +IP N+Y +Y+ P+  L +
Sbjct: 317 NVSRTWTFETGLLLNKMVGPDIPYNDYYEYYGPDYKLEV 355


>gi|356516091|ref|XP_003526730.1| PREDICTED: histone deacetylase 19-like [Glycine max]
          Length = 497

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/339 (62%), Positives = 273/339 (80%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++++P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHD 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 QCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK II 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHFLFKPIIG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ FN+PLL+ GGGGYT  
Sbjct: 255 KIMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHV 353


>gi|149246213|ref|XP_001527576.1| histone deacetylase RPD3 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447530|gb|EDK41918.1| histone deacetylase RPD3 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 521

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/358 (59%), Positives = 270/358 (75%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++YFYD DVG+ ++G  H MKPHR+ MTH L+++Y+L+KKMEIYR   A  +EL Q
Sbjct: 15  SKRRVAYFYDQDVGNYFYGTGHCMKPHRIRMTHSLIMNYELYKKMEIYRAEPATNLELTQ 74

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y++F+ R+TPD  HLF +E   +N+GEDCPVF+ L EFC+I  GG+++ A RLNN
Sbjct: 75  FHSDEYIDFIDRVTPDNLHLFPREAQIFNVGEDCPVFDGLNEFCKISCGGSMEGAARLNN 134

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              D+AIN+AGGLHHAKK EASGFCY ND+VL I+ELL+ H RVLYID DVHHGDGVEEA
Sbjct: 135 GDADVAINYAGGLHHAKKSEASGFCYTNDIVLAIIELLRKHPRVLYIDTDVHHGDGVEEA 194

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY  DRVMT SFHKFG+ FFPGTG+V +IG  +GK+Y++NVPL+DGIDD S+  +F+ II
Sbjct: 195 FYTNDRVMTCSFHKFGE-FFPGTGNVGDIGIGKGKYYSVNVPLRDGIDDASYKSIFEPII 253

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K+VE Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   LP++V GGGGYT 
Sbjct: 254 LKIVEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGLPMMVLGGGGYTI 313

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
            NVAR W  ETGI     LP E+P N Y +Y+AP  E  +R  N +   S + +DK +
Sbjct: 314 RNVARTWAFETGICNGVLLPKELPYNGYYEYYAPTFELDVRSSNMNNANSKEYLDKIL 371


>gi|195152497|ref|XP_002017173.1| GL22163 [Drosophila persimilis]
 gi|198453833|ref|XP_002137747.1| GA27397 [Drosophila pseudoobscura pseudoobscura]
 gi|194112230|gb|EDW34273.1| GL22163 [Drosophila persimilis]
 gi|198132534|gb|EDY68305.1| GA27397 [Drosophila pseudoobscura pseudoobscura]
          Length = 436

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 203/339 (59%), Positives = 267/339 (78%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y L KKM+IYRP+KA   ++ +FHS
Sbjct: 5   RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLDKKMKIYRPYKASAQDMLRFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct: 65  DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct: 125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTGD+ E+G   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct: 185 AFYLTDRVMTASFHKYGNYFFPGTGDMYELGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct: 245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVKELNVPTLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D ++ N++P  EY ++F P+ +L
Sbjct: 305 LRNVARCWTHETSLLVDQDIDNDLPITEYYEFFGPDFTL 343


>gi|169883796|gb|ACA97994.1| mutant histone deacetylase 6 [Arabidopsis thaliana]
          Length = 471

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/343 (60%), Positives = 266/343 (77%), Gaps = 3/343 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           R K ++SYFY+  +G  Y+G  HPMKPHR+ M H L++ Y LH+++EI RP  A   ++ 
Sbjct: 16  RRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIG 75

Query: 62  QFHSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           +FHS +YV+FL  ++P++       + L ++N+GEDCPVF+ LF+FC+  AGG+I AA +
Sbjct: 76  RFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVK 135

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN Q  DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK   RVLYIDIDVHHGDGV
Sbjct: 136 LNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGV 195

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMTVSFHKFGD FFPGTG ++++G  +GK+YA+NVPL DG+DD SF  LF+
Sbjct: 196 EEAFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFR 254

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGG
Sbjct: 255 PLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGG 314

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           YT  NVARCW  ET + +  E  N++P NEY +YF P+ +L +
Sbjct: 315 YTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHV 357


>gi|297797301|ref|XP_002866535.1| hypothetical protein ARALYDRAFT_496493 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312370|gb|EFH42794.1| hypothetical protein ARALYDRAFT_496493 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 471

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/344 (59%), Positives = 267/344 (77%), Gaps = 3/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFY+  +G  Y+G  HPMKPHR+ M H L++ Y LH+++EI RP+ A   ++ +F
Sbjct: 18  KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPNLADASDIGRF 77

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS +YV+FL  ++P++       + L ++N+GEDCPVF+ LF+FC+  AGG+I AA +LN
Sbjct: 78  HSPEYVDFLASVSPESMGDPSSSRNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLN 137

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
            Q  DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK   RVLYIDIDVHHGDGVEE
Sbjct: 138 RQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEE 197

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTG ++++G  +GK+YA+NVPL DG+DD SF  LF+ +
Sbjct: 198 AFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPL 256

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT
Sbjct: 257 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYT 316

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNG 345
             NVARCW  ET + +  E  N++P NEY +YF P+ +L +  G
Sbjct: 317 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPG 360


>gi|449303909|gb|EMC99916.1| hypothetical protein BAUCODRAFT_54799, partial [Baudoinia
           compniacensis UAMH 10762]
          Length = 481

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 202/337 (59%), Positives = 262/337 (77%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ M H L+++Y L+K++EIYR   A  +E+ QFH+
Sbjct: 14  KVAYFYDSDVGNYAYNAGHPMKPHRIRMAHSLIMNYGLYKRLEIYRAKPASKLEMTQFHT 73

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL ++TPD    + +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 74  DEYVDFLSKVTPDNMDAYAREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRGKC 133

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGI+ELL++H RVLYIDIDVHHGDGVEEAFY 
Sbjct: 134 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELLRFHPRVLYIDIDVHHGDGVEEAFYT 193

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+   F+ +I  V
Sbjct: 194 TDRVMTVSFHKYGE-YFPGTGELRDIGVGNGKHYAVNFPLRDGIDDKSYKDCFEPVIQWV 252

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FN P L+ GGGGYT  NV
Sbjct: 253 MDFYQPSAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNKPTLILGGGGYTMRNV 312

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETG L+  E+ +E+P  +Y +Y++P+  L +
Sbjct: 313 ARTWAYETGRLVGVEMSSELPFTDYYEYYSPDFELEV 349


>gi|11967857|emb|CAC19454.1| histone deacetylase [Ustilago maydis]
          Length = 566

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 256/319 (80%), Gaps = 1/319 (0%)

Query: 25  PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
           PMKPHR+ MTH+LV +Y LHKKM+I RP +A   ++ +FH+ +YV+FLHR+TP+T H   
Sbjct: 13  PMKPHRMRMTHNLVTNYGLHKKMDILRPKRATRDQMTRFHTDEYVDFLHRVTPETVHELT 72

Query: 85  QELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 144
            E T+Y +GEDCP F+ L+EFC I AGG++ AA RLN+   D+AINWAGGLHHAKK EAS
Sbjct: 73  NEGTRYLIGEDCPAFDGLYEFCSISAGGSLAAATRLNSGESDVAINWAGGLHHAKKREAS 132

Query: 145 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 204
           GFCY+ND+VL ILELL+ H RVLYIDID+HHGDGVEEAFY TDRVMT SFHKFGD FFPG
Sbjct: 133 GFCYVNDIVLAILELLRVHLRVLYIDIDIHHGDGVEEAFYTTDRVMTASFHKFGD-FFPG 191

Query: 205 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 264
           TGDV++IG ++GK Y +NVPL+DGI D  F  +F+ IIS ++E Y PGA+VLQCGADSLA
Sbjct: 192 TGDVRDIGMKKGKNYCVNVPLRDGIGDLEFGNIFRPIISHIMEWYRPGAVVLQCGADSLA 251

Query: 265 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 324
           GD+LGCFNLS+ GHAECV F++ F++PL+  GGGGYT  NVAR WT ETG+L+  +L  +
Sbjct: 252 GDKLGCFNLSMRGHAECVAFMQTFDVPLITLGGGGYTVRNVARTWTYETGLLVGQKLDED 311

Query: 325 IPENEYIKYFAPECSLRIP 343
           +P N+YI+YF PE  L +P
Sbjct: 312 LPFNDYIQYFGPEYKLEVP 330


>gi|326433359|gb|EGD78929.1| Hdac1 protein [Salpingoeca sp. ATCC 50818]
          Length = 677

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/357 (58%), Positives = 280/357 (78%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++Y+YD DVG+ Y+GP HPMKPHR+ M H+L+L+Y L+KKME+YRPH+A   ++ ++
Sbjct: 5   RTRVAYYYDFDVGNYYYGPGHPMKPHRIRMAHNLILNYGLYKKMEVYRPHRATFEDMTKY 64

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV F+  + PD       +  ++N+G+DCPVF+ L+EFCQ+ AGG++  A +LN++
Sbjct: 65  HSDEYVSFIRDMDPDKLEASPPDSARFNVGDDCPVFDGLYEFCQLSAGGSLAGAAKLNSK 124

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 125 QCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKRHQRVLYVDIDIHHGDGVEEAF 184

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T+RVMTVSFHKFG+ +FPGTGD+ +IG  EGK YA+NVPLKDG++D  +  +FK ++ 
Sbjct: 185 YCTNRVMTVSFHKFGE-YFPGTGDIGDIGHGEGKNYAVNVPLKDGMNDECYELIFKPVMD 243

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            +++ Y PGA+VLQCGADSLAGDRLGCFNLS+ GHA+CV  +K +N PLL+ GGGGYT  
Sbjct: 244 HIMQFYDPGAVVLQCGADSLAGDRLGCFNLSLKGHAKCVEHMKSYNKPLLLLGGGGYTIR 303

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI--VCSFKEIDKFI 358
           NVARCWT ET + L TE+ +E+P N+Y +YF P+  L I  G+     S ++ID+ I
Sbjct: 304 NVARCWTYETSVALGTEISDELPFNDYYEYFGPDFRLHITPGNAENFNSKQDIDQII 360


>gi|425876821|gb|AFY07417.1| histone deacetylase 1-like protein [Schmidtea mediterranea]
          Length = 437

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 197/317 (62%), Positives = 259/317 (81%), Gaps = 1/317 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KME+Y+P KA   ++  FH+ +Y++FL RI PD  H + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEVYKPSKATADDMTMFHTDEYIQFLQRIHPDNMHEYNK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           E+ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN    DIAINW+GGLHHAKK EASG
Sbjct: 61  EMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKNKADIAINWSGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+V+GILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVMGILELLKYHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+K+IG  +GK YA+N PL+DGIDD S+  +FK ++ KV+E++ P AIVLQCGADSL+G
Sbjct: 180 GDIKDIGAGKGKNYAVNFPLRDGIDDESYESIFKPVVEKVIESFKPNAIVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLS+ GH +CV ++++  +PLL+ GGGGYT  NVARCWT ET + L T +PNE+
Sbjct: 240 DRLGCFNLSLKGHGKCVEYMRQQPIPLLMLGGGGYTIRNVARCWTYETALALGTTIPNEL 299

Query: 326 PENEYIKYFAPECSLRI 342
           P N+Y +YF P+  L I
Sbjct: 300 PYNDYYEYFTPDFKLHI 316


>gi|449550698|gb|EMD41662.1| histone deacetylase complex catalytic component RPD3 [Ceriporiopsis
           subvermispora B]
          Length = 546

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/345 (60%), Positives = 272/345 (78%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D DV   ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E+ Q
Sbjct: 9   SKKRVCYFFDSDVSGFHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMTQ 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV+FL RITP   + + +E  KYN+G+DCPVF+ LFE+C I AGG+++ A RL+ 
Sbjct: 69  FHSDEYVDFLSRITPLNMNSYMKEQHKYNVGDDCPVFDGLFEYCSISAGGSMEGAARLSR 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 129 DKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTG+++++G  +GK+YA+N PL+DGI D S+  +F+ +I
Sbjct: 189 FYTTDRVMTVSFHKYGE-FFPGTGELRDVGIAKGKYYALNFPLRDGITDESYKSVFEPVI 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+E+Y PGAIVLQCG DS++GD+LGCFNLS+ GHA CV+FVK FN PLL+ GGGGYT 
Sbjct: 248 QQVMESYDPGAIVLQCGTDSVSGDKLGCFNLSMRGHANCVKFVKSFNKPLLLLGGGGYTM 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NV+RCW  ETG+    EL +EIP NEY +YF P+  L + + ++
Sbjct: 308 RNVSRCWAYETGLAAGVELGSEIPMNEYYEYFGPDYELDVKSSNM 352


>gi|356539660|ref|XP_003538313.1| PREDICTED: histone deacetylase 19-like [Glycine max]
          Length = 497

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SYFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPTAAKDRDLCKF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 ACDVAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGYGKGKYYSLNVPLDDGIDDESYQSLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR ++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRHMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + L  EL +++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCYETSVALGIELDDKMPQHEYYEYFGPDYTLHV 353


>gi|348685268|gb|EGZ25083.1| hypothetical protein PHYSODRAFT_311727 [Phytophthora sojae]
          Length = 447

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 201/341 (58%), Positives = 264/341 (77%), Gaps = 1/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++YFYD D+G+ ++G NHPMKPHR+ M H+L+ +Y L K ME++RP      EL +
Sbjct: 19  SKRRVAYFYDSDIGNYHYGQNHPMKPHRVRMAHNLITNYGLTKHMEVFRPRLVDWTELTR 78

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  +TPD  H + ++L ++N+GEDCPVF+ LFEFCQ+YA  +I  A +LN 
Sbjct: 79  FHSDDYIHFLRLVTPDNMHEYLRQLQRFNVGEDCPVFDGLFEFCQLYASASIGGAAKLNA 138

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DI IN++GGLHH K+ EASGFCY+ND VLGILELLK H RVLYIDID+HHGDGVEEA
Sbjct: 139 GSADIVINYSGGLHHGKRSEASGFCYVNDCVLGILELLKTHQRVLYIDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RVMT SFHK+G+ FFPGTGD+K+IG  +GK YA+N P +DG+DD SFT +F+++I
Sbjct: 199 FYTTNRVMTCSFHKYGE-FFPGTGDLKDIGHGDGKHYAVNFPCRDGMDDESFTGIFRSVI 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E +APGA++LQCG DSL+GDRLG FNLS  GHA+CV +VK FN+P LV GGGGYT 
Sbjct: 258 AKVMEHFAPGAVLLQCGTDSLSGDRLGSFNLSAKGHADCVAYVKSFNIPTLVVGGGGYTL 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            NVAR W  E  +L+  ++P+ +P N+Y +Y+ PE  L +P
Sbjct: 318 RNVARAWCYEASLLVGVDIPDAMPYNDYFEYYGPEYRLHLP 358


>gi|427793457|gb|JAA62180.1| Putative histone deacetylase complex catalytic component rpd3,
           partial [Rhipicephalus pulchellus]
          Length = 509

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/330 (62%), Positives = 265/330 (80%), Gaps = 1/330 (0%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL
Sbjct: 1   GDIGNYYYGQGHPMKPHRMRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFL 60

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWA
Sbjct: 61  RSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQATDIAVNWA 120

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYID+D+HHGDGVEEAFY TDRVMT 
Sbjct: 121 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDVDIHHGDGVEEAFYTTDRVMTC 180

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ +ISKV+E Y P 
Sbjct: 181 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFQPLISKVMEMYQPS 239

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCGADSL+GDRLGCFNL++ GH +C  FV+++NLPLL  GGGGYT  NVARCWT E
Sbjct: 240 AVVLQCGADSLSGDRLGCFNLTLKGHGKCAEFVRRYNLPLLQLGGGGYTIRNVARCWTYE 299

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 300 TAVALGVEIANELPYNDYFEYFGPDFKLHI 329


>gi|449444439|ref|XP_004139982.1| PREDICTED: histone deacetylase 19-like [Cucumis sativus]
 gi|449475672|ref|XP_004154519.1| PREDICTED: histone deacetylase 19-like [Cucumis sativus]
          Length = 492

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/339 (61%), Positives = 275/339 (81%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++++P  A    L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVFKPLPARDKVLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN++
Sbjct: 76  HADDYVAFLKSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHK 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           +CDIA+NW+GGLHHAKKCEASGFCY+ND+VL ILELLK++ RVLY+DID+HHGDGVEEAF
Sbjct: 136 VCDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKHYERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGYGKGKYYSLNVPLDDGIDDESYHFLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++P++EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYTLHV 353


>gi|225680434|gb|EEH18718.1| histone deacetylase [Paracoccidioides brasiliensis Pb03]
          Length = 474

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/358 (57%), Positives = 272/358 (75%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 19  RKRVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIYRAKPANKFEMTQF 78

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 79  HTDEYIDFLAKVTPDNMDSYVKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 138

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 139 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 198

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGI+D S+  +F+ +I 
Sbjct: 199 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYAVNFPLRDGIEDISYKGIFEPVIK 257

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 258 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 317

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 318 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 375


>gi|312281711|dbj|BAJ33721.1| unnamed protein product [Thellungiella halophila]
          Length = 500

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ 
Sbjct: 76  HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTG +++IG   GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YSTDRVMTVSFHKFGD-YFPGTGHIQDIGYGNGKYYSLNVPLDDGIDDESYHLLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGVEVDDKMPEHEYYEYFGPDYTLHV 353


>gi|224121742|ref|XP_002318661.1| histone deacetylase [Populus trichocarpa]
 gi|222859334|gb|EEE96881.1| histone deacetylase [Populus trichocarpa]
          Length = 440

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/339 (61%), Positives = 263/339 (77%), Gaps = 3/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFY+  +G  Y+G  H MKPHR+ M H+L+++Y LH++MEI RP  A P ++  F
Sbjct: 19  KRRVSYFYEPTIGEYYYGQGHSMKPHRIRMAHNLIINYALHRRMEINRPFPAGPEDIGWF 78

Query: 64  HSADYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS DYVEFL  ++P +       ++L ++N+GEDCPVF  LFEFCQ  AGG+I  A +LN
Sbjct: 79  HSDDYVEFLSSVSPQSASDPAHGRQLKRFNIGEDCPVFYGLFEFCQASAGGSIGCAVKLN 138

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIA+NWAGGLHHAK+ EASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGVEE
Sbjct: 139 RGDADIALNWAGGLHHAKRSEASGFCYVNDIVLGILELLKVHKRVLYVDIDVHHGDGVEE 198

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+GD FFPGTG +K+IG  +GK YA+N+PLKDG+DD  F  LF+ +
Sbjct: 199 AFYTTDRVMTVSFHKYGD-FFPGTGHIKDIGVGKGKNYALNIPLKDGMDDECFRALFRPL 257

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ FN+PL++ GGGGYT
Sbjct: 258 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFIRSFNVPLMILGGGGYT 317

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCW  ET + +  E  N++P NEY +YF PE +L
Sbjct: 318 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPEYTL 356


>gi|367019356|ref|XP_003658963.1| histone deacetylase RPD3-like protein [Myceliophthora thermophila
           ATCC 42464]
 gi|347006230|gb|AEO53718.1| histone deacetylase RPD3-like protein [Myceliophthora thermophila
           ATCC 42464]
          Length = 647

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 201/339 (59%), Positives = 259/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++YD++K +EIYR   A   E+ QF
Sbjct: 24  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYDVYKFLEIYRAKPAVTSEMTQF 83

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN +
Sbjct: 84  HTDEYIEFLQKVTPDNMDSFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRE 143

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 144 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYVDIDVHHGDGVEEAF 203

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD ++  +F+ +I 
Sbjct: 204 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGNGKHYAVNFPLRDGIDDVTYRTIFEPVIE 262

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FV+ F LP LV GGGGYT  
Sbjct: 263 AVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVRSFGLPTLVLGGGGYTMR 322

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG L+  E+   +P NEY  Y+ P+  L +
Sbjct: 323 NVARTWAYETGRLVGVEMDPVLPYNEYYNYYGPDYELDV 361


>gi|253720705|gb|ACT33454.1| histone deacetylase 1 [Brassica rapa subsp. pekinensis]
          Length = 502

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ 
Sbjct: 76  HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTG +++IG   GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGIEVEDKMPEHEYYEYFGPDYTLHV 353


>gi|357140242|ref|XP_003571679.1| PREDICTED: probable histone deacetylase 19-like [Brachypodium
           distachyon]
          Length = 518

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ RPH A   +L +
Sbjct: 21  QKRRVCYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLAQYGLLDQMQVLRPHPARDRDLCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY+ FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAG ++ +A +LN 
Sbjct: 81  FHADDYISFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGASVGSAVKLN- 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEA
Sbjct: 140 RGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHQRVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDVRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ FN+PLL+ GGGGYT 
Sbjct: 259 AKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 319 RNVARCWCYETGVALGQELEDKMPINEYYEYFGPDYTLHV 358


>gi|320591421|gb|EFX03860.1| histone deacetylase rpd3 [Grosmannia clavigera kw1407]
          Length = 746

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 193/344 (56%), Positives = 267/344 (77%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y ++K +E+YR   A  +E+ QF
Sbjct: 22  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYGVYKFLEVYRAKPAVFMEMTQF 81

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    +++E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 82  HTDEYIDFLQKVTPDNMDSYQREQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 141

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL I+ELL+++ RVLYIDIDVHHGDGVEEAF
Sbjct: 142 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAIIELLRFNKRVLYIDIDVHHGDGVEEAF 201

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD ++  +F+ +++
Sbjct: 202 YTTDRVMTASFHKYGE-YFPGTGELRDIGIGTGKNYAVNFPLRDGIDDETYKTIFRPVVT 260

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            +++ + P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FV+ FNLP+LV GGGGYT  
Sbjct: 261 AIMQYFQPDAVVLQCGGDSLSGDRLGCFNLSMHGHASCVEFVRSFNLPMLVVGGGGYTMR 320

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVAR W  ETG L+  ++   +P NEY +Y+ P+  L + + ++
Sbjct: 321 NVARTWAFETGKLVGVDMDPVLPYNEYYEYYGPDYELNVRSSNM 364


>gi|326522668|dbj|BAJ88380.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 518

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 272/340 (80%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ RP+ A   +L +
Sbjct: 21  QKRRVCYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLAQYGLLDQMQVLRPNPARDRDLCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY+ FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAG ++  A +LN+
Sbjct: 81  FHADDYISFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGASVGGAVKLNH 140

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            L DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEA
Sbjct: 141 GL-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHQRVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDVRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ FN+PLL+ GGGGYT 
Sbjct: 259 AKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 319 RNVARCWCYETGVALGQELEDKMPVNEYYEYFGPDYTLHV 358


>gi|301115106|ref|XP_002905282.1| histone deacetylase, putative [Phytophthora infestans T30-4]
 gi|262110071|gb|EEY68123.1| histone deacetylase, putative [Phytophthora infestans T30-4]
          Length = 447

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 200/341 (58%), Positives = 266/341 (78%), Gaps = 1/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++YFYD ++G+ ++G NHPMKPHR+ M H+L+ +Y L K ME++RP     +EL +
Sbjct: 19  SKRRVAYFYDSEIGNYHYGQNHPMKPHRVRMAHNLITNYGLTKHMEVFRPRLVDWMELTR 78

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  +TPD  H + ++L ++N+GEDCPVF+ LFEFCQ+YA  +I  A +LN 
Sbjct: 79  FHSDDYIHFLRLVTPDNMHEYLRQLQRFNVGEDCPVFDGLFEFCQLYASASIGGAAKLNA 138

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DI IN++GGLHH K+ EASGFCY+ND VLGILELLK H RVLYIDID+HHGDGVEEA
Sbjct: 139 GSADIVINYSGGLHHGKRSEASGFCYVNDCVLGILELLKAHQRVLYIDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RVMT SFHK+G+ FFPGTGD+K+IG  +GK Y++N P +DG+DD SFT +F+++I
Sbjct: 199 FYTTNRVMTCSFHKYGE-FFPGTGDIKDIGYGDGKHYSVNFPCRDGMDDESFTGIFRSVI 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV+E +APGA++LQCG DSL+GDRLG FNLS  GHA+CV +VK FN+P LV GGGGYT 
Sbjct: 258 AKVMEHFAPGAVLLQCGTDSLSGDRLGSFNLSAKGHADCVAYVKSFNIPTLVVGGGGYTL 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            NVAR W  E  +L+D ++P+ +P N+Y +Y+ PE  L +P
Sbjct: 318 RNVARAWCYEASLLVDVDIPDAMPYNDYFEYYGPEYRLHLP 358


>gi|15242626|ref|NP_201116.1| histone deacetylase 6 [Arabidopsis thaliana]
 gi|75262723|sp|Q9FML2.1|HDA6_ARATH RecName: Full=Histone deacetylase 6
 gi|10177292|dbj|BAB10553.1| histone deacetylase [Arabidopsis thaliana]
 gi|18176319|gb|AAL60022.1| putative histone deacetylase [Arabidopsis thaliana]
 gi|21593886|gb|AAM65853.1| histone deacetylase [Arabidopsis thaliana]
 gi|23296897|gb|AAN13198.1| putative histone deacetylase [Arabidopsis thaliana]
 gi|169883792|gb|ACA97992.1| histone deacetylase 6 [Arabidopsis thaliana]
 gi|169883794|gb|ACA97993.1| histone deacetylase 6 [Arabidopsis thaliana]
 gi|332010322|gb|AED97705.1| histone deacetylase 6 [Arabidopsis thaliana]
          Length = 471

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/341 (60%), Positives = 265/341 (77%), Gaps = 3/341 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFY+  +G  Y+G  HPMKPHR+ M H L++ Y LH+++EI RP  A   ++ +F
Sbjct: 18  KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRF 77

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS +YV+FL  ++P++       + L ++N+GEDCPVF+ LF+FC+  AGG+I AA +LN
Sbjct: 78  HSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLN 137

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
            Q  DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK   RVLYIDIDVHHGDGVEE
Sbjct: 138 RQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEE 197

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTG ++++G  +GK+YA+NVPL DG+DD SF  LF+ +
Sbjct: 198 AFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPL 256

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT
Sbjct: 257 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYT 316

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  E  N++P NEY +YF P+ +L +
Sbjct: 317 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHV 357


>gi|126134313|ref|XP_001383681.1| hypothetical protein PICST_57812 [Scheffersomyces stipitis CBS
           6054]
 gi|126095830|gb|ABN65652.1| histone deacetylase [Scheffersomyces stipitis CBS 6054]
          Length = 488

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/358 (57%), Positives = 273/358 (76%), Gaps = 3/358 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+ ++G  H MKPHR+ MTH L+++Y+L+KKMEIYR   A   EL QF
Sbjct: 17  KTRVAYFYDRDVGNYFYGTGHCMKPHRIRMTHSLIMNYELYKKMEIYRARPATNTELTQF 76

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD  H+F +E   +N+G+DCPVF+ L EFC+I  GG+++ A R+NN 
Sbjct: 77  HTDEYIDFIDRVTPDNLHMFEREQIIFNVGDDCPVFDGLGEFCKISCGGSMEGAARINNG 136

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CD+AIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+ H RVLYID DVHHGDGVEEAF
Sbjct: 137 SCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRVHPRVLYIDTDVHHGDGVEEAF 196

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ ++G  +GK++A+N+PL+DGIDD S+  +F+ IIS
Sbjct: 197 YTNDRVMTCSFHKFGE-FFPGTGNLNDVGIGKGKYHAVNIPLRDGIDDASYKSIFEPIIS 255

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV +VK F +P++V GGGGYT  
Sbjct: 256 KIIEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVSYVKSFGIPMMVVGGGGYTIR 315

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGI  D  L  E+P N Y +Y+AP  E  +R  N     S + +D+ ++
Sbjct: 316 NVARTWAFETGICNDVILDKELPYNGYYEYYAPLYELDVRSSNMTNANSPEYLDRILM 373


>gi|212723952|ref|NP_001131831.1| uncharacterized protein LOC100193206 [Zea mays]
 gi|194692666|gb|ACF80417.1| unknown [Zea mays]
 gi|413936783|gb|AFW71334.1| hypothetical protein ZEAMMB73_655063 [Zea mays]
          Length = 539

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 268/340 (78%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ Y+YD DVG+ Y+G  HPMKPHR+ MTH L+  Y L  +M +YRP  A   +L +
Sbjct: 21  QKRRVCYYYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMHVYRPSLASQRDLCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL  +TPDTQ    + L ++N+GEDCPVF+ L+ FCQ YAG ++  A RLN+
Sbjct: 81  FHADDYIKFLRSVTPDTQQEQTRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAFRLNH 140

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASG+CY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 141 GH-DIAINWSGGLHHAKKSEASGYCYVNDIVLAILELLKYHERVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++N PL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNAPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT 
Sbjct: 259 SKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY  YFAP  +L +
Sbjct: 319 RNVARCWCYETGVALGQELEDKMPANEYYGYFAPYYTLHV 358


>gi|15233694|ref|NP_195526.1| histone deacetylase 1/2 [Arabidopsis thaliana]
 gi|21431761|sp|O22446.2|HDA19_ARATH RecName: Full=Histone deacetylase 19; Short=AtHD1; Short=HD
 gi|4467119|emb|CAB37553.1| Histone deacetylase [Arabidopsis thaliana]
 gi|7270797|emb|CAB80478.1| Histone deacetylase [Arabidopsis thaliana]
 gi|20260508|gb|AAM13152.1| histone deacetylase [Arabidopsis thaliana]
 gi|31711912|gb|AAP68312.1| At4g38130 [Arabidopsis thaliana]
 gi|110740878|dbj|BAE98535.1| Histone deacetylase [Arabidopsis thaliana]
 gi|332661481|gb|AEE86881.1| histone deacetylase 1/2 [Arabidopsis thaliana]
          Length = 501

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ 
Sbjct: 76  HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTG +++IG   GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHV 353


>gi|11066139|gb|AAG28474.1|AF195547_1 putative histone deacetylase [Arabidopsis thaliana]
 gi|2318131|gb|AAB66486.1| histone deacetylase [Arabidopsis thaliana]
          Length = 501

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARERDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ 
Sbjct: 76  HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTG +++IG   GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHV 353


>gi|297801898|ref|XP_002868833.1| hypothetical protein ARALYDRAFT_327775 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314669|gb|EFH45092.1| hypothetical protein ARALYDRAFT_327775 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 500

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ 
Sbjct: 76  HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTG +++IG   GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGNGKYYSLNVPLDDGIDDESYHLLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHV 353


>gi|413936784|gb|AFW71335.1| hypothetical protein ZEAMMB73_655063 [Zea mays]
          Length = 504

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/340 (62%), Positives = 268/340 (78%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ Y+YD DVG+ Y+G  HPMKPHR+ MTH L+  Y L  +M +YRP  A   +L +
Sbjct: 21  QKRRVCYYYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMHVYRPSLASQRDLCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY++FL  +TPDTQ    + L ++N+GEDCPVF+ L+ FCQ YAG ++  A RLN+
Sbjct: 81  FHADDYIKFLRSVTPDTQQEQTRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAFRLNH 140

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASG+CY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 141 GH-DIAINWSGGLHHAKKSEASGYCYVNDIVLAILELLKYHERVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++N PL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNAPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT 
Sbjct: 259 SKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY  YFAP  +L +
Sbjct: 319 RNVARCWCYETGVALGQELEDKMPANEYYGYFAPYYTLHV 358


>gi|162459227|ref|NP_001105064.1| histone deacetylase HDA101 [Zea mays]
 gi|14550104|gb|AAK67142.1|AF384032_1 histone deacetylase HDA101 [Zea mays]
 gi|194707120|gb|ACF87644.1| unknown [Zea mays]
 gi|413926130|gb|AFW66062.1| putative histone deacetylase 19 [Zea mays]
          Length = 517

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 270/340 (79%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YFYD DVG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++YRP+ A   +L +
Sbjct: 21  QKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY+ FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAG ++  A +LN+
Sbjct: 81  FHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAVKLNH 140

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEA
Sbjct: 141 GH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT 
Sbjct: 259 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  E  +++P NEY +YF P+ +L +
Sbjct: 319 RNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHV 358


>gi|413926129|gb|AFW66061.1| hypothetical protein ZEAMMB73_699642 [Zea mays]
          Length = 516

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 270/340 (79%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YFYD DVG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++YRP+ A   +L +
Sbjct: 21  QKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DY+ FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAG ++  A +LN+
Sbjct: 81  FHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAVKLNH 140

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEA
Sbjct: 141 GH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT 
Sbjct: 259 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  E  +++P NEY +YF P+ +L +
Sbjct: 319 RNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHV 358


>gi|12698880|gb|AAK01712.1|AF332875_1 histone deacetylase HD1 [Oryza sativa Indica Group]
          Length = 493

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/338 (63%), Positives = 268/338 (79%), Gaps = 2/338 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ +FYD +VG+ Y G  HPMKPHR+ MTH L+  Y L  +M++ +PH A   +L +
Sbjct: 20  AKRRVCHFYDAEVGNYYCGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCR 79

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 80  FHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 139

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 140 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK II
Sbjct: 199 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPII 257

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGGY  
Sbjct: 258 SKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYAI 317

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCW  ETG+ L  EL +++P NEY +YF PE SL
Sbjct: 318 RNVARCWCYETGVALGHELTDKMPPNEYFEYFGPEYSL 355


>gi|19070647|gb|AAL83942.1|AF352394_1 putative histone deacetylase [Physarum polycephalum]
          Length = 579

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/343 (61%), Positives = 276/343 (80%), Gaps = 2/343 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K++YFYD DVG+ Y+G  HPMKPHR+ MTH+L+L+Y  +KKM+IYRP +A  +++ +
Sbjct: 4   NKPKVAYFYDADVGNYYYGQGHPMKPHRIRMTHNLLLNYGPYKKMQIYRPRRATELDMTK 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY++FL  ++PD  + + ++L ++N+ EDCP+FE +F F QI AGG++  A +LNN
Sbjct: 64  FHSDDYIQFLRLVSPDNMNEYAKQLQRFNVVEDCPIFEGMFNFFQISAGGSVGGAVKLNN 123

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              ++A+NWAGGLH AKK EASGFCY+ND+VL ILELLK+H R+LYID+D+HHGDGVEEA
Sbjct: 124 NDANVAMNWAGGLHQAKKSEASGFCYVNDIVLAILELLKHHQRILYIDVDIHHGDGVEEA 183

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD++++G  +GK+YA+N PLKDGIDD S+  +FK II
Sbjct: 184 FYTTDRVMTVSFHKFGD-YFPGTGDIRDVGAGKGKYYAVNFPLKDGIDDESYQSVFKPII 242

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E Y PGAIV Q GA SL+GDRLG FNLSI GHAEC+ F+K+FNLPLLV GGGGYT 
Sbjct: 243 QAVIEFYRPGAIVFQSGAHSLSGDRLGGFNLSIRGHAECLTFLKQFNLPLLVLGGGGYTI 302

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR-IPN 344
            NVARCW  +TG++LDTEL +E+P N+Y++YF P+  L   PN
Sbjct: 303 RNVARCWAYDTGVVLDTELDDELPYNDYLEYFGPDYRLHYTPN 345


>gi|145334261|ref|NP_001078511.1| histone deacetylase 1/2 [Arabidopsis thaliana]
 gi|332661482|gb|AEE86882.1| histone deacetylase 1/2 [Arabidopsis thaliana]
          Length = 469

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ 
Sbjct: 76  HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTG +++IG   GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHV 353


>gi|356508709|ref|XP_003523097.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 464

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 204/343 (59%), Positives = 266/343 (77%), Gaps = 5/343 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  Y+G  HPMKPHR+ M H+L++ Y LH++M++ RP  A   ++ +F
Sbjct: 24  KRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMQVNRPFPAAEADIGRF 83

Query: 64  HSADYVEFLHRITP----DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           H+ DYV+FL  ++P    +  H   ++L ++N+GEDCPVF+ LF+FC+  AGG+I AA R
Sbjct: 84  HADDYVDFLSTVSPQILSENSHSHYRQLKRFNVGEDCPVFDGLFDFCRASAGGSIGAAVR 143

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN +  D+AINWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLYIDIDVHHGDGV
Sbjct: 144 LNREDADVAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGV 203

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMTVSFHKFGD FFPGTG +K+IG   GK Y++NVPL DG+DD +F  LF+
Sbjct: 204 EEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDIGVGAGKNYSLNVPLNDGLDDETFRGLFR 262

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            II KV++ Y P A+VLQCGADSL+GDRLGCFNL++ GHA+C+RF++ FN+PL+V GGGG
Sbjct: 263 PIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLRFLRSFNVPLMVLGGGG 322

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           YT  NVARCW  ET + +  E   ++P NEY +YF P+ +L +
Sbjct: 323 YTVRNVARCWCYETAVAVGVEPSPKLPYNEYYEYFGPDYNLHV 365


>gi|9022439|gb|AAF82385.1| histone deacetylase [Mesembryanthemum crystallinum]
          Length = 500

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/339 (61%), Positives = 265/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SYFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct: 16  KRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPVPARDRDLCRF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV FL  ITP+ Q    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+ 
Sbjct: 76  HADDYVSFLRGITPEMQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           LCDIAINWAGGLHHAKK EASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T+RVMTVSFHKFGD +FPGT     IG  +GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct: 196 YTTERVMTVSFHKFGD-YFPGTETFVYIGYGKGKYYSLNVPLDDGIDDESYQSLFKPIMG 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+++  FN+PLL+ GGGGYT  
Sbjct: 255 KVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMISFNVPLLLVGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            VARCW  ETG+ L  EL ++IP++EY +YF P+ +L +
Sbjct: 315 YVARCWCYETGVALGFELDDKIPQHEYYEYFGPDYTLHV 353


>gi|312066846|ref|XP_003136464.1| histone deacetylase 3 [Loa loa]
 gi|307768373|gb|EFO27607.1| histone deacetylase 3 [Loa loa]
          Length = 428

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 201/344 (58%), Positives = 263/344 (76%), Gaps = 3/344 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SK ++ Y++  DV + ++G  HPMKP RL   H LV++Y LHK+M +  P +A  +E+
Sbjct: 1   MTSKREVCYYFHHDVPNFHYGSRHPMKPQRLAALHSLVVNYGLHKEMLVLTPPRASAIEI 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV+FL R++P T   +    ++YN+GEDCP+F+ +FEFC IY G T+    RL
Sbjct: 61  ERFHSKDYVDFLQRVSPRTADQYENLFSQYNIGEDCPIFDGIFEFCSIYTGATLSGVARL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+ L DIAINW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+
Sbjct: 121 NHGLSDIAINWSGGLHHAKKREASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ ++G+  G++YA+NVP+K+G+DD ++  LFK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYDVGQDSGRYYAVNVPMKEGMDDENYHSLFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++  V++ + P  IVLQCGADSL  DRLGCFNLS  GH ECV FV+   +P+L  GGGGY
Sbjct: 241 VVGAVIDCFNPSVIVLQCGADSLGCDRLGCFNLSFSGHGECVDFVRSLGIPMLAVGGGGY 300

Query: 301 TKENVARCWTVETGILL--DTELPNEIPEN-EYIKYFAPECSLR 341
           T  NVARCWT ET IL+    E+P+EIP N EY+++FAPE +LR
Sbjct: 301 TLRNVARCWTYETAILVGKKDEIPDEIPNNTEYLQFFAPEFTLR 344


>gi|449019309|dbj|BAM82711.1| histone deacetylase [Cyanidioschyzon merolae strain 10D]
          Length = 427

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/341 (60%), Positives = 263/341 (77%), Gaps = 4/341 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++YF D DVG  Y+G +HPMKPHR+ +TH+L L+Y L++ M++Y+P KA P E  +FH+
Sbjct: 15  RVAYFMDFDVGGYYYGQHHPMKPHRMAITHNLCLAYGLYRHMDVYKPRKASPEECEKFHA 74

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGE---DCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY+EFL   TPDT       +L ++N+G    DCP+F+ L++FC + AGG+ID AR+L 
Sbjct: 75  HDYIEFLRNTTPDTITDDVLDQLQRFNVGRQHGDCPLFDGLWDFCAVSAGGSIDGARKLM 134

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DIAINWAGGLHHAKK EASGFCY+ND+VL ILELL+ + RVLYIDIDVHHGDGVEE
Sbjct: 135 SGTSDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRLYPRVLYIDIDVHHGDGVEE 194

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRV+TVSFHK+GD FFPGTGDV + G   G+ YA+NVPLKDG+DD  F+R+F+ I
Sbjct: 195 AFYTTDRVLTVSFHKYGDNFFPGTGDVWDRGYGRGEGYAVNVPLKDGMDDAGFSRIFEPI 254

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I+KV+E Y PGAIV+QCGADSLA DRLGCFNL++ GHA  V FV+ F +P+LV GGGGY 
Sbjct: 255 ITKVIEVYQPGAIVMQCGADSLAHDRLGCFNLTVQGHANAVAFVRSFRIPMLVLGGGGYN 314

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET +LL   +  +IP N+Y +YFAPE SL I
Sbjct: 315 IRNVARCWLFETSVLLGISVDAQIPYNDYWEYFAPEYSLHI 355


>gi|109716220|gb|ABG43092.1| histone deacetylase HDAC3 [Triticum aestivum]
          Length = 519

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/339 (61%), Positives = 271/339 (79%), Gaps = 2/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++ RP+ A   +L +F
Sbjct: 22  KRRVCYFYDSEVGNYYYGQGHPMKPHRIRMTHSLLAQYGLLDQMQVLRPNPARDRDLCRF 81

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DY+ FL  +TP+TQ    + L ++N+GEDCPVF+ L+  CQ YAG ++  A +LN+ 
Sbjct: 82  HADDYISFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSLCQTYAGASVGGAVKLNHG 141

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           L DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEAF
Sbjct: 142 L-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHQRVLYVDIDIHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHKFGD +FPGTGDV++IG  +GK+Y++NVPL DGIDD S+  LFK I++
Sbjct: 201 YTTDRVMTVSFHKFGD-YFPGTGDVRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMA 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV++++ F++PLL+ GGGGYT  
Sbjct: 260 KVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFSVPLLLLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 320 NVARCWCYETGVALGQELEDKMPVNEYYEYFGPDYTLHV 358


>gi|170580093|ref|XP_001895111.1| histone deacetylase 3 (HD3) [Brugia malayi]
 gi|158598041|gb|EDP36027.1| histone deacetylase 3 (HD3), putative [Brugia malayi]
          Length = 428

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 201/344 (58%), Positives = 263/344 (76%), Gaps = 3/344 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SK ++ Y++  DV + ++G  HPMKP RL   H LV++Y LHK+M +  P +A  +E+
Sbjct: 1   MTSKREVCYYFHHDVPNFHYGSRHPMKPQRLAALHSLVVNYGLHKEMLVLTPPRASAIEI 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV+FL R++P T   +    ++YN+GEDCP+F+ +FEFC IY G T+    RL
Sbjct: 61  ERFHSKDYVDFLQRVSPRTADQYENLFSQYNIGEDCPIFDGIFEFCSIYTGATLSGVARL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+ L DIAINW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+
Sbjct: 121 NHGLSDIAINWSGGLHHAKKREASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQ 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ FFPGTGD+ ++G+  G++YA+NVP+K+G+DD ++  LFK 
Sbjct: 181 EAFYLTDRVMTVSFHKYGNYFFPGTGDMYDVGQDSGRYYAVNVPMKEGMDDENYHSLFKP 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++  V++ + P  IVLQCGADSL  DRLGCFNLS  GH ECV FV+   +P+L  GGGGY
Sbjct: 241 VVRAVIDCFNPSVIVLQCGADSLGCDRLGCFNLSFSGHGECVDFVRSLGIPMLAVGGGGY 300

Query: 301 TKENVARCWTVETGILL--DTELPNEIPEN-EYIKYFAPECSLR 341
           T  NVARCWT ET IL+    E+P+EIP N EY+++FAPE +LR
Sbjct: 301 TLRNVARCWTYETAILVGKKDEIPDEIPNNTEYLQFFAPEFTLR 344


>gi|391866877|gb|EIT76145.1| histone deacetylase complex, catalytic component RPD3 [Aspergillus
           oryzae 3.042]
          Length = 516

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/341 (59%), Positives = 265/341 (77%), Gaps = 1/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           +SK +++YFYD DVG+  +   HPMKPHR+ M H L+L+Y L+KKMEIYR   A   E+ 
Sbjct: 17  QSKRRVAYFYDSDVGNYAYVSGHPMKPHRMRMAHSLILNYGLYKKMEIYRAKPATKYEMT 76

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +FHS +Y++FL ++TPDT      E  KYN  +D PV++ L EFC I AGG+++AA RLN
Sbjct: 77  RFHSDEYIDFLFKVTPDTISKHLTEQVKYNFNDDNPVWDGLSEFCSISAGGSMEAAARLN 136

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N+ CDIAINWAGGLHHAKK EA+GFCY+ND+VLGILELL++H RVLYIDIDVHHGDGVEE
Sbjct: 137 NRKCDIAINWAGGLHHAKKSEANGFCYVNDIVLGILELLRFHPRVLYIDIDVHHGDGVEE 196

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFH++GD FFPGTGD+ +IG  EGK +++NVPL+ G+DD S++R+F+ +
Sbjct: 197 AFYTTDRVMTVSFHQYGD-FFPGTGDIGDIGVSEGKNHSVNVPLRPGMDDVSYSRVFQRV 255

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V++ Y P A+VLQCG DSL+GDRLG FNLS+ GHA CV +VK FNLP ++ GGGGYT
Sbjct: 256 IKGVMDWYRPDAVVLQCGGDSLSGDRLGSFNLSMRGHANCVNYVKSFNLPTMLVGGGGYT 315

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETG+++  E+  ++P +++  Y+AP+  L +
Sbjct: 316 MRNVARTWAFETGVVVGEEVGPDLPYDDFYGYYAPDYILDV 356


>gi|317137829|ref|XP_001727194.2| histone deacetylase RPD3 [Aspergillus oryzae RIB40]
          Length = 516

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/341 (59%), Positives = 265/341 (77%), Gaps = 1/341 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           +SK +++YFYD DVG+  +   HPMKPHR+ M H L+L+Y L+KKMEIYR   A   E+ 
Sbjct: 17  QSKRRVAYFYDSDVGNYAYVSGHPMKPHRMRMAHSLILNYGLYKKMEIYRAKPATKYEMT 76

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +FHS +Y++FL ++TPDT      E  KYN  +D PV++ L EFC I AGG+++AA RLN
Sbjct: 77  RFHSDEYIDFLFKVTPDTISKHLTEQVKYNFNDDNPVWDGLSEFCSISAGGSMEAAARLN 136

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N+ CDIAINWAGGLHHAKK EA+GFCY+ND+VLGILELL++H RVLYIDIDVHHGDGVEE
Sbjct: 137 NRKCDIAINWAGGLHHAKKSEANGFCYVNDIVLGILELLRFHPRVLYIDIDVHHGDGVEE 196

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFH++GD FFPGTGD+ +IG  EGK +++NVPL+ G+DD S++R+F+ +
Sbjct: 197 AFYTTDRVMTVSFHQYGD-FFPGTGDIGDIGVSEGKNHSVNVPLRPGMDDVSYSRVFQRV 255

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V++ Y P A+VLQCG DSL+GDRLG FNLS+ GHA CV +VK FNLP ++ GGGGYT
Sbjct: 256 IKGVMDWYRPDAVVLQCGGDSLSGDRLGSFNLSMRGHANCVNYVKSFNLPTMLVGGGGYT 315

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVAR W  ETG+++  E+  ++P +++  Y+AP+  L +
Sbjct: 316 MRNVARTWAFETGVVVGEEVGPDLPYDDFYGYYAPDYILDV 356


>gi|402079504|gb|EJT74769.1| histone deacetylase RPD3 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 667

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 199/339 (58%), Positives = 262/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y ++K +E+YR   A   E+ QF
Sbjct: 28  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYGVYKFLEVYRAKPAVFTEMTQF 87

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL R+TPD    + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 88  HTDEYIEFLQRVTPDNMDGYVKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRA 147

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VL I+ELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 148 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLAIIELLRFKKRVLYIDIDVHHGDGVEEAF 207

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+ ++F+ +I 
Sbjct: 208 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGPGKHYAVNFPLRDGIDDDSYKKIFEPVID 266

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ + P A+VLQCG+DSL+GDRLGCFNLS+ GHA CV FV+ F LP LV GGGGYT  
Sbjct: 267 AVMKYFQPEAVVLQCGSDSLSGDRLGCFNLSMRGHANCVDFVRGFGLPTLVLGGGGYTMR 326

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG L+  E+  E+P NEY +Y+ P+  L +
Sbjct: 327 NVARTWAYETGRLVGVEMSRELPYNEYYEYYGPDYELDV 365


>gi|17508561|ref|NP_493026.1| Protein HDA-3 [Caenorhabditis elegans]
 gi|3878853|emb|CAB03224.1| Protein HDA-3 [Caenorhabditis elegans]
          Length = 465

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 197/340 (57%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SY+YDGD G+ Y+G  HPMKPHR+ MTH L+++Y L++K+ + RP +A   E+ +
Sbjct: 6   SKSRVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITR 65

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY+ FL  +  D    F  ++ ++++GEDCPVF+ ++EFCQ+  GG++ AA RLN 
Sbjct: 66  YHSDDYINFLRNVKSDNMSTFTDQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNR 125

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +IAINW GGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDIDVHHGDGVEEA
Sbjct: 126 QESEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHKRVLYIDIDVHHGDGVEEA 185

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK G+ +FPGTGD+K++G   GK+YA+NVPL+DG+DD ++ R+F+TI+
Sbjct: 186 FYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIM 244

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+  + P A+VLQCGADSLAGDRLG FNL+  GH +CV ++K FN+PLL+ GGGGYT 
Sbjct: 245 GEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTI 304

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCW  ET I L+ E+ +++P ++Y  YF P+  L I
Sbjct: 305 RNVSRCWLYETAIALNQEVSDDLPLHDYFDYFIPDYKLHI 344


>gi|427793829|gb|JAA62366.1| Putative histone deacetylase complex catalytic component rpd3,
           partial [Rhipicephalus pulchellus]
          Length = 448

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/338 (60%), Positives = 272/338 (80%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K  + YF+D DVG+ ++GP HPMKP RL +TH LV+ Y L+KKM+++RP++A   ++ +
Sbjct: 34  TKKNVMYFWDPDVGNFHYGPGHPMKPQRLSVTHSLVMHYGLYKKMQVFRPYRASSHDMCR 93

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y++FL R+TP     F + L+ +N+G+DCPVF+ L++FC +Y G +++ A +LNN
Sbjct: 94  FHSEEYIDFLERVTPQNIQTFTKSLSHFNVGDDCPVFDGLYDFCSMYTGASLEGAVKLNN 153

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           + CDIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 154 ECCDIAINWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVQEA 213

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y++NVPLK+GIDD S+ ++FK +I
Sbjct: 214 FYLTDRVMTVSFHKYGNYFFPGTGDMYELGAESGRYYSVNVPLKEGIDDASYFQVFKPVI 273

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E + P  IVLQCGADSLAGDRLGCFNLSI GH ECV+F+++  LPLLV GGGGYT 
Sbjct: 274 QGVMEFFQPSCIVLQCGADSLAGDRLGCFNLSIRGHGECVKFIRELGLPLLVLGGGGYTV 333

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVAR WT ET +LLD  + +EIP NEY +YFAP+ +L
Sbjct: 334 RNVARAWTYETSLLLDEPVSSEIPYNEYFEYFAPDFTL 371


>gi|324509244|gb|ADY43891.1| Histone deacetylase 1 [Ascaris suum]
          Length = 462

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/339 (59%), Positives = 263/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++Y+YD +VG+ Y+G  H MKPHR+ MTHHL+L+Y L++ +E+YRP  A   E+ +F
Sbjct: 11  KRRVAYYYDSNVGNYYYGQGHVMKPHRIRMTHHLLLNYGLYRNLEVYRPFPATFEEMTRF 70

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y+ FL    PD    F +++ K+N+GEDCPVF+ LFEFCQ+ +GG++ AA +LN +
Sbjct: 71  HSNEYMMFLRTANPDNLKQFNKQMLKFNVGEDCPVFDGLFEFCQLSSGGSLAAAVKLNKR 130

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 131 KADIAINWMGGLHHAKKSEASGFCYSNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 190

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+GD FFPGTG++K+IG   GK+YA+NVPL+DGI D S+  +F  +++
Sbjct: 191 YTTDRVMTVSFHKYGD-FFPGTGELKDIGAGRGKYYAVNVPLRDGITDESYQSIFVPVMT 249

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P A+VLQCGADSL GDRLG FNL++ GH  C RF ++  +PL++ GGGGYT  
Sbjct: 250 KVMEVFQPSAVVLQCGADSLNGDRLGTFNLTLKGHGACARFFRERCIPLMMLGGGGYTPR 309

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCWT ET I ++ E+ +++P N+Y +YF P   L I
Sbjct: 310 NVARCWTYETSIAVNMEVSDDLPYNDYFEYFGPHYRLHI 348


>gi|154422506|ref|XP_001584265.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121918511|gb|EAY23279.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 435

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/339 (61%), Positives = 260/339 (76%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I YFYD DVG+ ++ PNHPMKPHR+ M H+L+LSY+L  K++IYRP KA   EL +F
Sbjct: 6   KKRIVYFYDEDVGNFFYAPNHPMKPHRIRMAHNLILSYNLFPKLQIYRPKKATVEELTRF 65

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL   TPD          K+N+GED PVFE LFEFCQ  AGG+I AAR LN+ 
Sbjct: 66  HTPEYIQFLQMATPDNTQNQACLFDKFNVGEDSPVFEGLFEFCQSSAGGSISAARHLNSG 125

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINWAGGLHHAKK EASGFCY+ D VLGILELL+ + RV+YIDID+HHGDGVEEAF
Sbjct: 126 HADIAINWAGGLHHAKKGEASGFCYVADCVLGILELLERYDRVMYIDIDIHHGDGVEEAF 185

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRV+TVSFHKFG+ FFPGTG  K+IG  +G+ YA+NVPLKDG+DD S+  +FK II 
Sbjct: 186 YTTDRVLTVSFHKFGNEFFPGTGHDKDIGLGKGRHYAVNVPLKDGMDDKSYHYIFKPIIK 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++E Y P AI LQCGADSL GDRLG FNL+I GH ECV +VK F LP+LV GGGGYT  
Sbjct: 246 HLIEWYRPQAIFLQCGADSLTGDRLGSFNLTIHGHGECVNYVKSFKLPMLVAGGGGYTVR 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+RCWT ET +LLD E+ +++P ++Y+ Y+ P+  L +
Sbjct: 306 NVSRCWTYETAVLLDEEIEDKLPYHDYLGYYGPDYRLDL 344


>gi|336275833|ref|XP_003352670.1| hypothetical protein SMAC_01503 [Sordaria macrospora k-hell]
 gi|380094560|emb|CCC07940.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 655

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 199/344 (57%), Positives = 263/344 (76%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y+++K +E+YR   A   E+ QF
Sbjct: 25  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYNVYKFLEVYRAKPAVTAEMTQF 84

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 85  HTDEYIEFLQKVTPDNMDGFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRD 144

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 145 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYVDIDVHHGDGVEEAF 204

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD +++ +F+ +IS
Sbjct: 205 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGSGKNYAVNFPLRDGIDDNTYSSIFQPVIS 263

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E + P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +V+ F LP LV GGGGYT  
Sbjct: 264 SVMEHFQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVRSFGLPTLVLGGGGYTMR 323

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVAR W  ETG L+  E+   +P NEY  Y+ P+  L + + ++
Sbjct: 324 NVARTWAYETGRLVGVEMNPVLPYNEYYDYYGPDYELDVRSSNM 367


>gi|255722215|ref|XP_002546042.1| histone deacetylase RPD3 [Candida tropicalis MYA-3404]
 gi|240136531|gb|EER36084.1| histone deacetylase RPD3 [Candida tropicalis MYA-3404]
          Length = 476

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/357 (57%), Positives = 271/357 (75%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+ ++G  H MKPHR+ M H L+++Y+L KKMEIYR   A  +E+ QF
Sbjct: 16  KKRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELDKKMEIYRAQPATNLEMTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R++PD  HLF++E   +N+G+DCPVF+ L EFC+I  GG+++ A RLNN 
Sbjct: 76  HTDEYIDFIDRVSPDNLHLFQREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNNG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAIN+AGGLHHAKK EASGFCY ND+VL I+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 136 SADIAINYAGGLHHAKKSEASGFCYTNDIVLAIIELLRYHPRVLYIDIDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHK+G+ FFPGTG++ +IG   GK++++NVPL+DGIDD ++  +F+ +IS
Sbjct: 196 YTNDRVMTCSFHKYGE-FFPGTGNLNDIGIGNGKYHSVNVPLRDGIDDATYKSVFEPVIS 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+ FN+P +V GGGGYT  
Sbjct: 255 KIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSFNVPFMVVGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETGI     LP E+P N Y +Y+AP  E  +R  N +   S + +DK +
Sbjct: 315 NVARTWAFETGICNGVILPKELPYNGYYEYYAPTYELDVRSSNMNNANSKEYLDKIL 371


>gi|11066141|gb|AAG28475.1|AF195548_1 putative histone deacetylase [Arabidopsis thaliana]
          Length = 471

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/341 (59%), Positives = 264/341 (77%), Gaps = 3/341 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFY+  +G  Y+G  HPMKPHR+ M H L++ Y LH+++EI RP  A   ++ +F
Sbjct: 18  KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRF 77

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS +YV+FL  ++P++       + L ++N+GEDCPVF+ LF+FC+  AGG+I AA +LN
Sbjct: 78  HSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLN 137

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
            Q  DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK   RVLYIDIDVHHGDGVEE
Sbjct: 138 RQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEE 197

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHKFGD FFPGTG ++++G  +GK+YA+NVPL DG+DD SF  LF+ +
Sbjct: 198 AFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPL 256

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GG GYT
Sbjct: 257 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGEGYT 316

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  E  N++P NEY +YF P+ +L +
Sbjct: 317 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHV 357


>gi|321259966|ref|XP_003194703.1| hypothetical protein CGB_F2490W [Cryptococcus gattii WM276]
 gi|317461175|gb|ADV22916.1| conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 469

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/346 (60%), Positives = 272/346 (78%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E++Q
Sbjct: 11  SKRRVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMSQ 70

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FL+RI PD    F +E  KYN+G+DCP+F+ LFE+C I AGG+++ A RL+ 
Sbjct: 71  FHTDEYVDFLYRINPDNAAQFAKEQVKYNVGDDCPIFDGLFEYCSISAGGSMEGAARLSR 130

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 131 DKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEA 190

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG+V++ G  +GK YAINVPL+DGI D ++  +F+ +I
Sbjct: 191 FYTTDRVMTCSFHKYGE-FFPGTGEVRDNGIGKGKGYAINVPLRDGISDDNYKSIFQPVI 249

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+E Y PGAIVLQCG+DSL+GDRLG FNLS+ GHA CV+FVK FNLPLL+ GGGGYT 
Sbjct: 250 KRVIEWYQPGAIVLQCGSDSLSGDRLGSFNLSMKGHAACVQFVKSFNLPLLLLGGGGYTV 309

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ++V+R W  ETG+    EL  ++P NEY +Y+ P+  L + + ++ 
Sbjct: 310 KSVSRTWAYETGLAAGMELGRDLPNNEYWEYYGPDYELDVRSSNMT 355


>gi|268569456|ref|XP_002640527.1| C. briggsae CBR-HDA-3 protein [Caenorhabditis briggsae]
          Length = 458

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 199/342 (58%), Positives = 263/342 (76%), Gaps = 1/342 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           + SK ++SY+YDGD G+ Y+G  HPMKPHR+ MTH L+++Y L++K+ + RP  A   E+
Sbjct: 2   LHSKSRVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLTVMRPAPASFSEI 61

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            ++HS DYV FL  +  D       ++ ++++GEDCPVF+ L+EFCQ+  GG++ AA +L
Sbjct: 62  TRYHSDDYVNFLRSVRSDNIQSLADQMARFSVGEDCPVFDGLYEFCQLSCGGSLAAAAKL 121

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N +  DIAINW GGLHHAKK EASGFCY ND+VL ILELLK H RVLYIDIDVHHGDGVE
Sbjct: 122 NRKESDIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKEHKRVLYIDIDVHHGDGVE 181

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK G+ +FPGTGD+K++G  +GK+YA+NVPL+DG+DD ++ R+F+T
Sbjct: 182 EAFYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGKGKYYALNVPLRDGVDDFTYERIFRT 240

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++ +V+  + P A+VLQCGADSLAGDRLG FNL+  GH  CV ++K FN+PLL+ GGGGY
Sbjct: 241 VMGEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGNCVEYMKSFNVPLLLVGGGGY 300

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NV+RCW  ET + LD ++PNE+P N+Y  YF P+  L I
Sbjct: 301 TIRNVSRCWLYETSLALDLDVPNELPFNDYFDYFIPDYKLHI 342


>gi|403414948|emb|CCM01648.1| predicted protein [Fibroporia radiculosa]
          Length = 556

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/340 (62%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ YF+D DV   ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ Q
Sbjct: 13  NKKRVCYFFDSDVSGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQ 72

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YVEFL RITP     F +E  KYN+G+DCPVF+ LFE+C I AGG+++ A RL+ 
Sbjct: 73  FHSDEYVEFLSRITPSNMQNFTKEQHKYNVGDDCPVFDGLFEYCSISAGGSMEGAARLSR 132

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH+RVLYIDIDVHHGDGVEEA
Sbjct: 133 DKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHSRVLYIDIDVHHGDGVEEA 192

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+N PL+DGI D S+  +F+ +I
Sbjct: 193 FYTTDRVMTCSFHKYGE-FFPGTGELRDIGIGKGKNYALNFPLRDGITDESYRSVFEPVI 251

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E Y PGAIVLQCG DSL+GD+LGC NLS+ GHA CV+FVK FN PLL+ GGGGYT 
Sbjct: 252 RSVMEHYDPGAIVLQCGTDSLSGDKLGCLNLSMRGHASCVKFVKSFNKPLLLLGGGGYTM 311

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCW  ETG+    EL +EIP NEY +YF P+  L +
Sbjct: 312 RNVSRCWAYETGLAAGVELGSEIPMNEYYEYFGPDYELDV 351


>gi|312065460|ref|XP_003135801.1| hypothetical protein LOAG_00213 [Loa loa]
 gi|307769022|gb|EFO28256.1| hypothetical protein LOAG_00213 [Loa loa]
          Length = 502

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/342 (61%), Positives = 266/342 (77%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YDGDVG+ Y+GP HPMKPHR+ MTH+L+L+Y L+++ME+YRPH A   E+ +
Sbjct: 7   SKIRVAYYYDGDVGNYYYGPGHPMKPHRIRMTHNLILNYGLYRRMEVYRPHVATFEEMTK 66

Query: 63  FHSADYVEFLHRITPD--TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           +HS DY+ FL    P+        +   +YN+GEDCPVF+ ++EFCQ   GG++ AA +L
Sbjct: 67  YHSNDYLTFLKNARPEDIIDSSTAKTRQRYNVGEDCPVFDGVYEFCQTSCGGSLAAAAKL 126

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N +  DI INW GGLHHAKK EASGFCY ND+VL ILELLK+H RVLY+DIDVHHGDGVE
Sbjct: 127 NKKQADITINWMGGLHHAKKSEASGFCYTNDIVLAILELLKHHQRVLYVDIDVHHGDGVE 186

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHKFG+ +FPGTGDV++IG   GK+YA+N PL DGIDD ++ R+FK 
Sbjct: 187 EAFYTTDRVMTVSFHKFGE-YFPGTGDVQDIGSGRGKYYAVNCPLHDGIDDDTYQRIFKP 245

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           I+ +V+  Y P AIVLQCGADSL GDRLGCFNLS+ GH +CV F+KKFNLPLL+ GGGGY
Sbjct: 246 IMEQVMLLYQPSAIVLQCGADSLVGDRLGCFNLSLKGHGKCVEFMKKFNLPLLLLGGGGY 305

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ET I LD E+ NE+P N+Y +Y++ +  L I
Sbjct: 306 TIRNVARCWAYETSIALDVEISNELPYNDYFEYYSSDFKLHI 347


>gi|221054776|ref|XP_002258527.1| histone deacetylase [Plasmodium knowlesi strain H]
 gi|193808596|emb|CAQ39299.1| histone deacetylase, putative [Plasmodium knowlesi strain H]
          Length = 448

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/346 (60%), Positives = 266/346 (76%), Gaps = 5/346 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M ++ K++YF+D DVGS Y+G  HPMKP R+ MTH L++SY+L+K ME+YRPHK+   EL
Sbjct: 1   MSNRKKVAYFHDPDVGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FH  +YV+FL  I+ +    F  +L ++N+GE  DCPVF+ LF+F Q  AG +ID A 
Sbjct: 61  TLFHDYEYVDFLSSISMENYRDFTCQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAS 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LN+   DI +NW+GGLHHAK  EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDG
Sbjct: 121 KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY T RVMTVSFHKFGD +FPGTGD+ +IG   GK+Y++NVPL DGI D +F  LF
Sbjct: 181 VEEAFYVTHRVMTVSFHKFGD-YFPGTGDITDIGVHHGKYYSVNVPLNDGITDDAFVDLF 239

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I K V+TY PGAI+LQCGADSL GDRLG FNL+I GHA CV  V+ +N+PLLV GGG
Sbjct: 240 KAVIDKCVQTYRPGAIILQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNIPLLVLGGG 299

Query: 299 GYTKENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLRI 342
           GYT  NV+RCW  ETG++L+   E+P++I  N+Y  Y+AP+  L +
Sbjct: 300 GYTIRNVSRCWAYETGVVLNKHHEMPDQISLNDYYDYYAPDFQLHL 345


>gi|299755140|ref|XP_001828456.2| histone deacetylase Hda1 [Coprinopsis cinerea okayama7#130]
 gi|298411088|gb|EAU93448.2| histone deacetylase Hda1 [Coprinopsis cinerea okayama7#130]
          Length = 590

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/339 (61%), Positives = 265/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YFYD D+G  ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ QF
Sbjct: 14  KKRVCYFYDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQF 73

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YVEFL +ITP+  + F +E  KYN+G+DCPVF+ LFE+C I AGG+++ A RL+  
Sbjct: 74  HSDEYVEFLSKITPNNMNSFVKEQHKYNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRD 133

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 134 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHNRVLYIDIDVHHGDGVEEAF 193

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+Y++N PL+DGI D ++  +F+ +I 
Sbjct: 194 YTTDRVMTVSFHKYGE-YFPGTGELRDVGIMKGKYYSLNFPLRDGISDENYKSVFEPVIR 252

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+ETY P AIVLQCG DSL+GD+LGC NLS+ GHA CV+FVK FN PLL+ GGGGYT  
Sbjct: 253 SVMETYDPSAIVLQCGTDSLSGDKLGCLNLSMKGHANCVKFVKSFNKPLLLLGGGGYTMR 312

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R W  ETG+    EL  EIP NEY +YF P+  L +
Sbjct: 313 NVSRAWAYETGLAAGVELNPEIPVNEYYEYFGPDYQLDV 351


>gi|328771816|gb|EGF81855.1| hypothetical protein BATDEDRAFT_34619 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 476

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 263/339 (77%), Gaps = 1/339 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +I+Y +  +VG+ ++G  HPMKP RL +TH+LV+ Y LHK M +Y P  A   EL +
Sbjct: 26  SKGRIAYLHRNEVGNFHYGDGHPMKPARLALTHNLVIGYGLHKMMTVYSPRLATDEELTE 85

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FH+ DY++F+ R++PD    + + L+++N+G EDCPVFE L++FC++ AG +I+ AR+LN
Sbjct: 86  FHTDDYIDFIQRVSPDNIQNYSKFLSRFNIGVEDCPVFEGLYDFCKMSAGASIEGARKLN 145

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +Q  DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL+YH RV+YIDIDVHHGDGV+E
Sbjct: 146 SQSADIAINWSGGLHHAKKFEASGFCYVNDIVLAILELLRYHPRVVYIDIDVHHGDGVQE 205

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY ++RVMTVSFH++   FFPGTG + E G R+GK YAIN+PL   IDD S+  +F  I
Sbjct: 206 AFYHSNRVMTVSFHRYDGQFFPGTGALSETGARKGKNYAINIPLHQSIDDASYAYIFTQI 265

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +S V++T+ P AIVLQCGADSLA DRLGCFNLSI GH ECVR+++ F +P+LV GGGGYT
Sbjct: 266 MSNVMQTFRPTAIVLQCGADSLASDRLGCFNLSIKGHGECVRYMRSFQIPMLVLGGGGYT 325

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L +T L +++P NEY+ ++ P+  L
Sbjct: 326 IRNVARCWTYETSVLTETNLSDDLPYNEYLSHYGPDFKL 364


>gi|344304154|gb|EGW34403.1| hypothetical protein SPAPADRAFT_59836 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 465

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/357 (58%), Positives = 270/357 (75%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+ ++G  H MKPHR+ MTH L+++Y+L+KKMEIYR   A  +EL QF
Sbjct: 16  KRRVAYFYDQDVGNYFYGTGHCMKPHRIRMTHSLIMNYELYKKMEIYRAKPATNLELTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD   LF +E   +N+G+DCPVF+ L EFC+I  GG+++ A RLNN 
Sbjct: 76  HTDEYIDFIDRVTPDNLQLFEREQIIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNNG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+ H RVLYID DVHHGDGVEEAF
Sbjct: 136 SADIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRVHPRVLYIDTDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK+YA+NVPL+DGIDD S+  +F+ II+
Sbjct: 196 YTNDRVMTCSFHKFGE-FFPGTGNLNDIGIGKGKYYAVNVPLRDGIDDASYKSIFEPIIA 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            +V+ Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   +P++V GGGGYT  
Sbjct: 255 AIVDWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGIPMMVVGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETGI     LP E+P N Y +Y+AP  E  +R  N +   S + +DK +
Sbjct: 315 NVARTWAFETGICNGAILPKELPYNGYYEYYAPLYELDVRSSNMNNANSREYLDKIL 371


>gi|58268884|ref|XP_571598.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134112962|ref|XP_775024.1| hypothetical protein CNBF1870 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257672|gb|EAL20377.1| hypothetical protein CNBF1870 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227833|gb|AAW44291.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 466

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/346 (59%), Positives = 272/346 (78%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E++Q
Sbjct: 11  SKRRVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMSQ 70

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FL+RI PD    F +E  KYN+G+DCP+F+ LFE+C I AGG+++ A RL+ 
Sbjct: 71  FHTDEYVDFLYRINPDNAAQFAKEQVKYNVGDDCPIFDGLFEYCSISAGGSMEGAARLSR 130

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 131 DKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEA 190

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG+V++ G  +GK YAINVPL+DGI D ++  +F+ +I
Sbjct: 191 FYTTDRVMTCSFHKYGE-FFPGTGEVRDNGIGKGKGYAINVPLRDGISDDNYKSIFQPVI 249

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+E Y PGA+VLQCG+DSL+GDRLG FNLS+ GHA CV+FVK FNLPLL+ GGGGYT 
Sbjct: 250 KRVIEWYQPGAVVLQCGSDSLSGDRLGSFNLSMKGHAACVQFVKSFNLPLLLLGGGGYTV 309

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ++V+R W  ETG+    EL  ++P NEY +Y+ P+  L + + ++ 
Sbjct: 310 KSVSRTWAYETGLAAGMELGRDLPNNEYWEYYGPDYELDVRSSNMT 355


>gi|405121239|gb|AFR96008.1| histone deacetylase 2 [Cryptococcus neoformans var. grubii H99]
          Length = 471

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/346 (59%), Positives = 272/346 (78%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E++Q
Sbjct: 11  SKRRVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMSQ 70

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FL+RI PD    F +E  KYN+G+DCP+F+ LFE+C I AGG+++ A RL+ 
Sbjct: 71  FHTDEYVDFLYRINPDNAAQFAKEQVKYNVGDDCPIFDGLFEYCSISAGGSMEGAARLSR 130

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 131 DKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEA 190

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG+V++ G  +GK YAINVPL+DGI D ++  +F+ +I
Sbjct: 191 FYTTDRVMTCSFHKYGE-FFPGTGEVRDNGIGKGKGYAINVPLRDGISDDNYKSIFQPVI 249

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+E Y PGA+VLQCG+DSL+GDRLG FNLS+ GHA CV+FVK FNLPLL+ GGGGYT 
Sbjct: 250 KRVIEWYQPGAVVLQCGSDSLSGDRLGSFNLSMKGHAACVQFVKSFNLPLLLLGGGGYTV 309

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ++V+R W  ETG+    EL  ++P NEY +Y+ P+  L + + ++ 
Sbjct: 310 KSVSRTWAYETGLAAGMELGRDLPNNEYWEYYGPDYELDVRSSNMT 355


>gi|123463215|ref|XP_001316942.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121899663|gb|EAY04719.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 418

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/351 (58%), Positives = 266/351 (75%), Gaps = 1/351 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K++I+YFYD ++G+ Y+   HPMKP R+ MTH LVL+Y LH  ++++RPH+A   E+ +F
Sbjct: 5   KNRIAYFYDEEIGNFYYEEGHPMKPVRVRMTHSLVLAYKLHNHLQVFRPHRATATEMMRF 64

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL   TP+      QE  +Y +G DCPVFEN+FE+CQI AGG+I AA+RLN  
Sbjct: 65  HSPDYIKFLQNATPENSITSIQEQKRYCIGSDCPVFENIFEYCQISAGGSICAAQRLNYN 124

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           L DIAINWAGGLHHA K + SGFCYI D VLGI+ELLKYH RV+YIDID+HHGDGVEEAF
Sbjct: 125 LADIAINWAGGLHHAAKEKPSGFCYIADCVLGIMELLKYHPRVMYIDIDIHHGDGVEEAF 184

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y +DRV+T SFHK+G+ FFPGTG V +IG   GK+YA+NVPL+DG+ D ++  +F+ IIS
Sbjct: 185 YDSDRVLTCSFHKYGNDFFPGTGHVFDIGVDLGKYYAVNVPLRDGMTDEAYQFIFRPIIS 244

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +++E + P AI+LQCGADSL GDRLG FNLS  GH +CV FVK F +PLLV GGGGYTK 
Sbjct: 245 RLIEWFVPSAIMLQCGADSLVGDRLGFFNLSTYGHGDCVSFVKSFGIPLLVVGGGGYTKT 304

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHIVCSFKE 353
           +VARCW  ET IL   ++PNE+PE +Y  ++ P   L + P+G   C+ +E
Sbjct: 305 SVARCWAYETSILTGVDIPNEMPETDYYDFYRPSYELHLKPDGKKNCNSRE 355


>gi|355764917|gb|EHH62339.1| hypothetical protein EGM_20640 [Macaca fascicularis]
          Length = 405

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/346 (59%), Positives = 263/346 (76%), Gaps = 6/346 (1%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS DY++FL R++P     F +
Sbjct: 1   MKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
            L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASG
Sbjct: 61  SLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGT
Sbjct: 121 FCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGT 180

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGADSL  
Sbjct: 181 GDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGC 240

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+
Sbjct: 241 DRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEEL 300

Query: 326 PENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILFNKQIL 365
           P +EY +YFAP+ +L      RI N +      +I + I  N ++L
Sbjct: 301 PYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKML 346


>gi|241958244|ref|XP_002421841.1| histone deacetylase, putative [Candida dubliniensis CD36]
 gi|223645186|emb|CAX39785.1| histone deacetylase, putative [Candida dubliniensis CD36]
          Length = 476

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/357 (58%), Positives = 269/357 (75%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+ ++G  H MKPHR+ M H L+++Y+L+KKMEIYR   A  +EL QF
Sbjct: 16  KRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD  HLF +E   +N+G+DCPVF+ L EFC+I  GG+++ A RLN  
Sbjct: 76  HTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAIN+AGGLHHAKK EASGFCY ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAF
Sbjct: 136 QADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++AIN+PL+DGIDD S+  +F+ II+
Sbjct: 196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIIT 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   +P++V GGGGYT  
Sbjct: 255 KIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPMMVLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETGI     LP E+P N Y +Y+AP  E  +R  N +   S   +DK +
Sbjct: 315 NVARTWAFETGICNGEILPKELPYNGYYEYYAPTYELDVRSANMNNANSKDYLDKIL 371


>gi|428175041|gb|EKX43933.1| hypothetical protein GUITHDRAFT_72637 [Guillardia theta CCMP2712]
          Length = 454

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/344 (58%), Positives = 258/344 (75%), Gaps = 4/344 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  + +++Y +D +VG  Y+GP+HPMKPHR+ + H L+L Y+LH KM  YRPHKA P E+
Sbjct: 1   MARRSRVAYIHDPEVGLFYYGPSHPMKPHRMQVAHQLILGYELHHKMSCYRPHKASPAEM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLG----EDCPVFENLFEFCQIYAGGTIDA 116
            +FH+ +Y++FL +ITPD  H     + ++N+G     DCPVF+ +F FCQI+ G ++D 
Sbjct: 61  RKFHTEEYIDFLLKITPDNMHEMADRMKQHNVGFVGQYDCPVFDGIFPFCQIFTGSSLDG 120

Query: 117 ARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHG 176
           A +L +   DIAINW+GGLHHAK  EASGFCYIND+VL ILELLK+  RVLYIDIDVHHG
Sbjct: 121 AAKLMDGSADIAINWSGGLHHAKSDEASGFCYINDIVLAILELLKFFPRVLYIDIDVHHG 180

Query: 177 DGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR 236
           DGVEEAF  TDRVMT SFHK+   FFP TGDV ++GE  GK+ ++NVPL DGIDD+SF +
Sbjct: 181 DGVEEAFINTDRVMTASFHKYDGNFFPQTGDVTDVGEGAGKYCSVNVPLHDGIDDSSFEQ 240

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           +FK II +++ TY P AIV+QCGADSLAGDRLG FNLS+  H ECV F+K FN+P+LV G
Sbjct: 241 IFKPIIREIIGTYDPKAIVMQCGADSLAGDRLGVFNLSVHAHGECVSFLKGFNIPMLVVG 300

Query: 297 GGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           GGGY   NVARCW  ET IL D+++ N++P N+Y  YFAP   L
Sbjct: 301 GGGYIIRNVARCWAWETAILTDSQVSNDLPWNDYWAYFAPSYQL 344


>gi|213402171|ref|XP_002171858.1| histone deacetylase clr6 [Schizosaccharomyces japonicus yFS275]
 gi|211999905|gb|EEB05565.1| histone deacetylase clr6 [Schizosaccharomyces japonicus yFS275]
          Length = 405

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/340 (59%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ K+SYFYD DVG+ ++GP H MKPHR+ M H+LV++Y LH+KM +  P +A   ++ +
Sbjct: 4   SRKKVSYFYDADVGNFHYGPQHVMKPHRVRMVHNLVVNYGLHEKMNVITPFRATKDDMTR 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
            H+ +Y++FL+R+TPDT   F+    K+N+G+D PVFE +FEFC I AGG+I AA+ LN+
Sbjct: 64  CHTDEYIDFLYRVTPDTMDKFQTHQLKFNVGDDSPVFEGIFEFCSISAGGSIGAAQELNS 123

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIA+NWAGGLHHAKK EASGFCY+ND+ L ILELLK+  RVLYIDIDVHHGDGVEE 
Sbjct: 124 GDTDIAVNWAGGLHHAKKREASGFCYVNDIALAILELLKFRQRVLYIDIDVHHGDGVEEF 183

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ FFPGTG +K+ G  +GK YA+NVPL+DGI D ++  +F+ +I
Sbjct: 184 FYTTDRVMTCSFHKFGE-FFPGTGHIKDTGIGKGKNYAVNVPLRDGITDETYASVFRPVI 242

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S +++ + P AI+LQCG DSLAGDRLGCFNLS+ GH++CVRFVK F +P++  GGGGYT 
Sbjct: 243 SHIIQWFRPEAIILQCGTDSLAGDRLGCFNLSMKGHSDCVRFVKSFGIPMICVGGGGYTV 302

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR WT ETGIL   +LP ++P N+Y++YF P+  L +
Sbjct: 303 RNVARVWTYETGILAGEDLPEDLPYNDYLQYFGPDYKLNV 342


>gi|71005666|ref|XP_757499.1| hypothetical protein UM01352.1 [Ustilago maydis 521]
 gi|46096622|gb|EAK81855.1| hypothetical protein UM01352.1 [Ustilago maydis 521]
          Length = 559

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/316 (63%), Positives = 253/316 (80%), Gaps = 1/316 (0%)

Query: 28  PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
           PHR+ MTH+LV +Y LHKKM+I RP +A   ++ +FH+ +YV+FLHR+TP+T H    E 
Sbjct: 9   PHRMRMTHNLVTNYGLHKKMDILRPKRATRDQMTRFHTDEYVDFLHRVTPETVHELTNEG 68

Query: 88  TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
           T+Y +GEDCP F+ L+EFC I AGG++ AA RLN+   D+AINWAGGLHHAKK EASGFC
Sbjct: 69  TRYLIGEDCPAFDGLYEFCSISAGGSLAAATRLNSGESDVAINWAGGLHHAKKREASGFC 128

Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
           Y+ND+VL ILELL+ H RVLYIDID+HHGDGVEEAFY TDRVMT SFHKFGD FFPGTGD
Sbjct: 129 YVNDIVLAILELLRVHLRVLYIDIDIHHGDGVEEAFYTTDRVMTASFHKFGD-FFPGTGD 187

Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
           V++IG ++GK Y +NVPL+DGI D  F  +F+ IIS ++E Y PGA+VLQCGADSLAGD+
Sbjct: 188 VRDIGMKKGKNYCVNVPLRDGIGDLEFGNIFRPIISHIMEWYRPGAVVLQCGADSLAGDK 247

Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
           LGCFNLS+ GHAECV F++ F++PL+  GGGGYT  NVAR WT ETG+L+  +L  ++P 
Sbjct: 248 LGCFNLSMRGHAECVAFMQTFDVPLITLGGGGYTVRNVARTWTYETGLLVGQKLDEDLPF 307

Query: 328 NEYIKYFAPECSLRIP 343
           N+YI+YF PE  L +P
Sbjct: 308 NDYIQYFGPEYKLEVP 323


>gi|124507060|ref|XP_001352127.1| histone deacetylase [Plasmodium falciparum 3D7]
 gi|4545130|gb|AAD22407.1|AF091326_1 histone deacetylase [Plasmodium falciparum]
 gi|23505157|emb|CAD51938.1| histone deacetylase [Plasmodium falciparum 3D7]
          Length = 449

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/351 (58%), Positives = 268/351 (76%), Gaps = 5/351 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M ++ K++YF+D D+GS Y+G  HPMKP R+ MTH L++SY+L+K ME+YRPHK+   EL
Sbjct: 1   MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FH  +Y++FL  I+ +    F  +L ++N+GE  DCPVF+ LF+F Q  AG +ID A 
Sbjct: 61  TLFHDYEYIDFLSSISLENYREFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAS 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LN+   DI +NW+GGLHHAK  EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDG
Sbjct: 121 KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY T RVMTVSFHKFGD +FPGTGD+ ++G   GK+Y++NVPL DG+ D +F  LF
Sbjct: 181 VEEAFYVTHRVMTVSFHKFGD-YFPGTGDITDVGVNHGKYYSVNVPLNDGMTDDAFVDLF 239

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I K V+TY PGAI++QCGADSL GDRLG FNL+I GHA CV  V+ +N+PLLV GGG
Sbjct: 240 KVVIDKCVQTYRPGAIIIQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNIPLLVLGGG 299

Query: 299 GYTKENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLRIPNGHI 347
           GYT  NV+RCW  ETG++L+   E+P++I  N+Y  Y+AP+  L +   +I
Sbjct: 300 GYTIRNVSRCWAYETGVVLNKHHEMPDQISLNDYYDYYAPDFQLHLQPSNI 350


>gi|3023947|sp|P56521.1|HDA19_MAIZE RecName: Full=Probable histone deacetylase 19; AltName: Full=RPD3
           homolog
 gi|2665840|gb|AAC50038.1| putative histone deacetylase RPD3 [Zea mays]
          Length = 513

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/340 (61%), Positives = 268/340 (78%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++ YFYD DVG+ Y+G  HPMKPHR+ MTH L+  Y L  +M++YRP+ A   EL +
Sbjct: 21  QKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARERELCR 80

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL  +TP+TQ    + L ++N+GE+CPV + L+ FCQ YAG ++  A + N+
Sbjct: 81  FHAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNH 140

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEA
Sbjct: 141 GH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEA 199

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 258

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT 
Sbjct: 259 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTI 318

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  E  +++P NEY +YF P+ +L +
Sbjct: 319 RNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHV 358


>gi|256088316|ref|XP_002580288.1| histone deacetylase [Schistosoma mansoni]
 gi|126216331|gb|ABN81194.1| histone deacetylase 3 [Schistosoma mansoni]
 gi|353232649|emb|CCD80004.1| histone deacetylase 3 [Schistosoma mansoni]
          Length = 418

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/343 (58%), Positives = 263/343 (76%), Gaps = 3/343 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    ++ YFYD D G+ ++GPNHPMKPHRL +TH LV++Y+L  +M++Y+P+ A   ++
Sbjct: 1   MGKDKRVVYFYDPDCGNFHYGPNHPMKPHRLTLTHTLVVNYNLTDRMKVYKPYHASMKDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLF-RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
             FHS +Y+EFL  +TP   H F +++L  YN+GEDCP+F+ ++ F  I+ G ++ AA+ 
Sbjct: 61  ISFHSQEYIEFLRDVTPTNVHTFPKEKLLTYNIGEDCPIFDGIYRFSSIHTGASLQAAKY 120

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LNN + DIAINW+GGLHHAKK EASGFCY+ND+V+  LELLKY+ RVLYIDIDVHHGDGV
Sbjct: 121 LNNGVTDIAINWSGGLHHAKKFEASGFCYVNDIVIATLELLKYNPRVLYIDIDVHHGDGV 180

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           +EAFY TDRVMTVSFH++G++FFPGTGD+ EIG + GK+YA+NVPLK+GIDD  +  +F+
Sbjct: 181 QEAFYLTDRVMTVSFHRYGNMFFPGTGDMYEIGAKAGKYYAVNVPLKEGIDDDMYFSVFR 240

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +I+ VV  Y P  IVLQCGADSL  DRLG FNLSI GH  CVR VK+  LPLLV GGGG
Sbjct: 241 AVINDVVAFYRPTTIVLQCGADSLGCDRLGVFNLSIRGHGRCVRMVKELGLPLLVVGGGG 300

Query: 300 YTKENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSL 340
           YT  NVARCW  ET +LLD   E+ NE+P + YI++F P+ +L
Sbjct: 301 YTVRNVARCWAYETAVLLDQEKEISNELPYSPYIEFFYPDYTL 343


>gi|389628056|ref|XP_003711681.1| histone deacetylase RPD3 [Magnaporthe oryzae 70-15]
 gi|351644013|gb|EHA51874.1| histone deacetylase RPD3 [Magnaporthe oryzae 70-15]
          Length = 659

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 197/344 (57%), Positives = 264/344 (76%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y ++K +E+YR   A   E+ QF
Sbjct: 21  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYGIYKFLEVYRAKPAVFTEMTQF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL R+TPD    + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 81  HTDEYIEFLQRVTPDNMDSYVKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRS 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VL I+ELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 141 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLAIIELLRFKKRVLYIDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+ ++F+ +I 
Sbjct: 201 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGPGKNYAVNFPLRDGIDDNSYKKIFEPVID 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ Y P A+VLQCG+DSL+GDRLGCFNLS+ GHA CV FV+ + LP LV GGGGYT  
Sbjct: 260 AVMKYYQPEAVVLQCGSDSLSGDRLGCFNLSMRGHANCVDFVRGYGLPTLVLGGGGYTMR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVAR W  ETG L+  ++   +P NEY +Y+ P+  L + + ++
Sbjct: 320 NVARTWAYETGRLVGVDMDRTLPYNEYYEYYGPDYELDVRSSNM 363


>gi|440474492|gb|ELQ43230.1| histone deacetylase RPD3 [Magnaporthe oryzae Y34]
 gi|440490860|gb|ELQ70361.1| histone deacetylase RPD3 [Magnaporthe oryzae P131]
          Length = 717

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 197/339 (58%), Positives = 261/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y ++K +E+YR   A   E+ QF
Sbjct: 79  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYGIYKFLEVYRAKPAVFTEMTQF 138

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL R+TPD    + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 139 HTDEYIEFLQRVTPDNMDSYVKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRS 198

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VL I+ELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 199 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLAIIELLRFKKRVLYIDIDVHHGDGVEEAF 258

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDD S+ ++F+ +I 
Sbjct: 259 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGPGKNYAVNFPLRDGIDDNSYKKIFEPVID 317

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ Y P A+VLQCG+DSL+GDRLGCFNLS+ GHA CV FV+ + LP LV GGGGYT  
Sbjct: 318 AVMKYYQPEAVVLQCGSDSLSGDRLGCFNLSMRGHANCVDFVRGYGLPTLVLGGGGYTMR 377

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR W  ETG L+  ++   +P NEY +Y+ P+  L +
Sbjct: 378 NVARTWAYETGRLVGVDMDRTLPYNEYYEYYGPDYELDV 416


>gi|440804685|gb|ELR25562.1| histone deacetylase 1, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 328

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/323 (65%), Positives = 267/323 (82%), Gaps = 1/323 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +I YFYDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L+K+M+IYRP  A   E+AQ
Sbjct: 2   SKQRICYFYDGDVGNYYYGNGHPMKPHRIRMTHNLLLNYGLYKQMKIYRPRHATKQEMAQ 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV+FL  ITPD  + + ++L ++N+GEDCPVF+ +++FCQI +GG+I  A +LN+
Sbjct: 62  FHAEDYVKFLRLITPDNMNEYTKQLQRFNVGEDCPVFDGMYQFCQISSGGSIGGAVKLNH 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCYIND+VL ILELLKYHARVLYIDID+HHGDGVEEA
Sbjct: 122 GESDIAINWAGGLHHAKKSEASGFCYINDIVLAILELLKYHARVLYIDIDIHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG ++GK+Y++N PL+DGIDD S+  +FK II
Sbjct: 182 FYTTDRVMTVSFHKYGE-YFPGTGDIRDIGAQKGKYYSVNFPLRDGIDDESYENIFKPII 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV++ Y PGA+VLQCGADSL+GDRLGCFNLS+ GH  CV FV+ F LPLLV GGGGYT 
Sbjct: 241 QKVMDWYRPGAVVLQCGADSLSGDRLGCFNLSLKGHGACVEFVQSFGLPLLVLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTELPNEI 325
            NVARCWT ET +LL  ++ + +
Sbjct: 301 RNVARCWTYETALLLKKDINDAL 323


>gi|238879740|gb|EEQ43378.1| histone deacetylase RPD3 [Candida albicans WO-1]
          Length = 478

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/357 (58%), Positives = 269/357 (75%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+ ++G  H MKPHR+ M H L+++Y+L+KKMEIYR   A  +EL QF
Sbjct: 16  KRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD  HLF +E   +N+G+DCPVF+ L EFC+I  GG+++ A RLN  
Sbjct: 76  HTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAIN+AGGLHHAKK EASGFCY ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAF
Sbjct: 136 QADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++AIN+PL+DGIDD S+  +F+ II+
Sbjct: 196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIIT 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   +P++V GGGGYT  
Sbjct: 255 KIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPMMVLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+     LP E+P N Y +Y+AP  E  +R  N     S + +DK +
Sbjct: 315 NVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKIL 371


>gi|328860682|gb|EGG09787.1| hypothetical protein MELLADRAFT_74327 [Melampsora larici-populina
           98AG31]
          Length = 388

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/344 (61%), Positives = 268/344 (77%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I YF+D D+G+ ++GP HPMKPHR+ MTH LV++Y L+KKMEI+R   A   E+AQF
Sbjct: 13  KRRICYFFDSDIGNYHYGPGHPMKPHRIRMTHALVMNYGLYKKMEIFRAKPATRKEMAQF 72

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYVEFL R+TPD    F +E  K+NLG+DCPVF+ LFE+C I AGG+++ A RL+  
Sbjct: 73  HTDDYVEFLSRVTPDNMEGFLKEQAKFNLGDDCPVFDGLFEYCSISAGGSMEGAARLSRD 132

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EA+GFCY+ND+VLGILELL+YH RVLY+DIDVHHGDGVEEAF
Sbjct: 133 KCDIAVNWAGGLHHAKKAEANGFCYVNDIVLGILELLRYHKRVLYVDIDVHHGDGVEEAF 192

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+N PL+DGI D ++  +F+ +I 
Sbjct: 193 YTTDRVMTCSFHKYGE-FFPGTGELRDIGSGKGKRYAVNFPLRDGITDEAYKNIFEPVIM 251

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++ETY P AIVLQCG DSLAGDRLG FN+S+ GHA CV+F+K   LPLL+ GGGGYT  
Sbjct: 252 KIMETYQPSAIVLQCGGDSLAGDRLGSFNVSLKGHANCVQFIKSLGLPLLLLGGGGYTIR 311

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NV+R W  ETG+    EL  EIP NEY +YF P   L +P  ++
Sbjct: 312 NVSRTWAFETGLAAGQELCREIPMNEYYEYFGPTYHLDVPASNM 355


>gi|123438020|ref|XP_001309799.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121891541|gb|EAX96869.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 453

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 261/339 (76%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD D+G+ Y+  +HPMKP R+ MTH LVL Y LH+ M+++ P +A P E+ +F
Sbjct: 5   KRRIAYFYDEDIGNYYYTHSHPMKPVRVRMTHSLVLGYKLHEHMDVFHPRRASPEEMMRF 64

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+  Y++FL   TP   +   ++   YN+G DCPVF+N+FEFCQI AGG+I AA+RLN  
Sbjct: 65  HTPGYIKFLQTATPSNTNPKSEDAVHYNIGFDCPVFDNIFEFCQISAGGSISAAQRLNYN 124

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
           L D+AINWAGGLHHA++ +ASGFCYI D VLGI+ELLKYH RV+YIDID+HHGDGVEEAF
Sbjct: 125 LADVAINWAGGLHHARRDQASGFCYIADCVLGIMELLKYHPRVMYIDIDIHHGDGVEEAF 184

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRV+TVSFHK+G  FFP +G + ++G   GK+YA+NVPL+DG+ D ++  LFK II 
Sbjct: 185 YNTDRVLTVSFHKYGKEFFPESGHISDVGINSGKYYAVNVPLRDGMTDEAYHYLFKPIIR 244

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++  Y PGAI LQCGADSL GD LG FNLS  GH ECV+FV+ F +PLLV GGGGY K+
Sbjct: 245 NLIHFYQPGAIFLQCGADSLVGDLLGYFNLSTYGHGECVKFVQSFGIPLLVAGGGGYIKQ 304

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           +VARCWT ET ++++ ++P+E+PEN+Y++YF P   L +
Sbjct: 305 SVARCWTYETSLIVNQDIPDELPENDYLEYFQPSYKLHL 343


>gi|345778325|ref|XP_532270.3| PREDICTED: histone deacetylase 2 [Canis lupus familiaris]
 gi|410959878|ref|XP_003986525.1| PREDICTED: histone deacetylase 2 [Felis catus]
          Length = 458

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/323 (63%), Positives = 263/323 (81%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct: 240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|344248728|gb|EGW04832.1| Histone deacetylase 2 [Cricetulus griseus]
          Length = 458

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/323 (63%), Positives = 263/323 (81%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct: 240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|397503309|ref|XP_003822268.1| PREDICTED: histone deacetylase 2 isoform 1 [Pan paniscus]
 gi|397503311|ref|XP_003822269.1| PREDICTED: histone deacetylase 2 isoform 2 [Pan paniscus]
 gi|426354308|ref|XP_004044608.1| PREDICTED: histone deacetylase 2 isoform 2 [Gorilla gorilla
           gorilla]
 gi|119568637|gb|EAW48252.1| histone deacetylase 2, isoform CRA_a [Homo sapiens]
 gi|119568638|gb|EAW48253.1| histone deacetylase 2, isoform CRA_a [Homo sapiens]
 gi|193787281|dbj|BAG52487.1| unnamed protein product [Homo sapiens]
          Length = 458

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/323 (63%), Positives = 263/323 (81%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct: 240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|332213073|ref|XP_003255643.1| PREDICTED: histone deacetylase 2 isoform 2 [Nomascus leucogenys]
 gi|390461981|ref|XP_003732767.1| PREDICTED: histone deacetylase 2-like [Callithrix jacchus]
 gi|402868498|ref|XP_003898338.1| PREDICTED: histone deacetylase 2 isoform 2 [Papio anubis]
 gi|441601510|ref|XP_004087680.1| PREDICTED: histone deacetylase 2 [Nomascus leucogenys]
          Length = 458

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/323 (63%), Positives = 263/323 (81%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct: 240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|444709097|gb|ELW50129.1| Histone deacetylase 2 [Tupaia chinensis]
          Length = 458

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/323 (63%), Positives = 263/323 (81%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct: 240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|170575666|ref|XP_001893332.1| Histone deacetylase 1 [Brugia malayi]
 gi|158600724|gb|EDP37830.1| Histone deacetylase 1, putative [Brugia malayi]
          Length = 481

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/340 (58%), Positives = 263/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD +VG+ Y+G  H MKPHR+ MTHHL+L+Y +++ +E+YRP  A   E+ +
Sbjct: 9   SKRRVAYYYDANVGNYYYGQGHVMKPHRIRMTHHLLLNYGIYRNLEVYRPFPATFEEMTR 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL   TPD    F +++ K+N+GEDCPVF+ LFEFCQ+  GG++ AA +LN 
Sbjct: 69  FHTNEYMMFLRTATPDNLKQFNKQMLKFNVGEDCPVFDGLFEFCQLSCGGSLAAAVKLNK 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEA
Sbjct: 129 RKADIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+GD FFPGTG++K+IG   GK+YA+NVPL+DGI D S+  +F  ++
Sbjct: 189 FYTTDRVMTCSFHKYGD-FFPGTGELKDIGAGRGKYYAVNVPLRDGITDESYQSIFVPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+ET+ P A+VLQ GADSL GDRLG FNL++ GH  C RF ++ ++PL++ GGGGYT 
Sbjct: 248 ERVMETFQPCAVVLQNGADSLNGDRLGTFNLTLRGHGACARFFRERHIPLMMLGGGGYTP 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET I +D E+ +++P N+Y +YF P   L I
Sbjct: 308 RNVARCWTYETSIAVDMEVSDDLPYNDYFEYFGPHYRLHI 347


>gi|68480433|ref|XP_715815.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
 gi|68480540|ref|XP_715765.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
 gi|46437404|gb|EAK96751.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
 gi|46437456|gb|EAK96802.1| potential Sin3.Rpd3 histone deacetylase complex component Rpd3p
           [Candida albicans SC5314]
          Length = 480

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/357 (58%), Positives = 269/357 (75%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+ ++G  H MKPHR+ M H L+++Y+L+KKMEIYR   A  +EL QF
Sbjct: 16  KRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD  HLF +E   +N+G+DCPVF+ L EFC+I  GG+++ A RLN  
Sbjct: 76  HTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAIN+AGGLHHAKK EASGFCY ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAF
Sbjct: 136 QADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++AIN+PL+DGIDD S+  +F+ II+
Sbjct: 196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIIT 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   +P++V GGGGYT  
Sbjct: 255 KIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+     LP E+P N Y +Y+AP  E  +R  N     S + +DK +
Sbjct: 315 NVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKIL 371


>gi|312076531|ref|XP_003140903.1| histone deacetylase 1 [Loa loa]
          Length = 464

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/340 (58%), Positives = 263/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD +VG+ Y+G  H MKPHR+ MTHHL+L+Y +++ +E+YRP  A   E+ +
Sbjct: 9   SKRRVAYYYDANVGNYYYGQGHVMKPHRIRMTHHLLLNYGIYRNLEVYRPFPATFEEMTR 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL   TPD    F +++ K+N+GEDCPVF+ LFEFCQ+  GG++ AA +LN 
Sbjct: 69  FHTNEYMMFLRTATPDNLKQFNKQMLKFNVGEDCPVFDGLFEFCQLSCGGSLAAAVKLNK 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEA
Sbjct: 129 RKADIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+GD FFPGTG++K+IG   GK+YA+NVPL+DGI D S+  +F  ++
Sbjct: 189 FYTTDRVMTCSFHKYGD-FFPGTGELKDIGAGRGKYYAVNVPLRDGITDESYQSIFVPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+ET+ P A+VLQ GADSL GDRLG FNL++ GH  C RF ++ ++PL++ GGGGYT 
Sbjct: 248 ERVMETFQPCAVVLQNGADSLNGDRLGTFNLTLRGHGACARFFRERHIPLMMLGGGGYTP 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET I +D E+ +++P N+Y +YF P   L I
Sbjct: 308 RNVARCWTYETSIAVDMEVSDDLPYNDYFEYFGPHYRLHI 347


>gi|452824684|gb|EME31685.1| histone deacetylase 1/2 [Galdieria sulphuraria]
          Length = 415

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/346 (58%), Positives = 260/346 (75%), Gaps = 3/346 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    K+ YF D D+G  Y+G +HPMKPHRL MTH+L+L+Y LH+ +++YR   A   EL
Sbjct: 1   MSKGSKVCYFMDTDIGGYYYGQHHPMKPHRLAMTHNLMLAYGLHQHLDVYRARLATTEEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE---DCPVFENLFEFCQIYAGGTIDAA 117
             FHS++Y++FL RI PD    F ++L K+N+G    D P+F+ L+++C +YA G+ID A
Sbjct: 61  TTFHSSEYIDFLRRINPDNAQEFVKQLQKFNVGRTGGDNPIFDGLYDYCCLYASGSIDGA 120

Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
           ++L      IAINWAGGLHHAKK EASGFCY+ND+VL ILE LKY  RV+YIDIDVHHGD
Sbjct: 121 KKLLTGKAQIAINWAGGLHHAKKSEASGFCYVNDIVLAILEFLKYWPRVVYIDIDVHHGD 180

Query: 178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
           GVEEAFY TDRVMTVSFHK+GD FFPGTGD+ + G   G++YA+NVPLKDGIDD S+ ++
Sbjct: 181 GVEEAFYVTDRVMTVSFHKYGDNFFPGTGDIWDKGSGAGEYYAVNVPLKDGIDDESYFQI 240

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           FK ++ KV ET+ P A+VLQCG DSLA DRLG FNL++ GHA CV+FVK F +P+LV GG
Sbjct: 241 FKPVVEKVFETFQPSAVVLQCGTDSLARDRLGGFNLTVKGHARCVQFVKSFGVPMLVVGG 300

Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           GGY   +VARCW  ET +LLD E+ + IP N+Y +YFAPE  +  P
Sbjct: 301 GGYNIRSVARCWLHETSVLLDREVDDRIPYNDYWEYFAPEYRIHQP 346


>gi|393908162|gb|EFO23171.2| histone deacetylase 1 [Loa loa]
          Length = 465

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/340 (58%), Positives = 263/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD +VG+ Y+G  H MKPHR+ MTHHL+L+Y +++ +E+YRP  A   E+ +
Sbjct: 9   SKRRVAYYYDANVGNYYYGQGHVMKPHRIRMTHHLLLNYGIYRNLEVYRPFPATFEEMTR 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL   TPD    F +++ K+N+GEDCPVF+ LFEFCQ+  GG++ AA +LN 
Sbjct: 69  FHTNEYMMFLRTATPDNLKQFNKQMLKFNVGEDCPVFDGLFEFCQLSCGGSLAAAVKLNK 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEA
Sbjct: 129 RKADIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+GD FFPGTG++K+IG   GK+YA+NVPL+DGI D S+  +F  ++
Sbjct: 189 FYTTDRVMTCSFHKYGD-FFPGTGELKDIGAGRGKYYAVNVPLRDGITDESYQSIFVPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+ET+ P A+VLQ GADSL GDRLG FNL++ GH  C RF ++ ++PL++ GGGGYT 
Sbjct: 248 ERVMETFQPCAVVLQNGADSLNGDRLGTFNLTLRGHGACARFFRERHIPLMMLGGGGYTP 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET I +D E+ +++P N+Y +YF P   L I
Sbjct: 308 RNVARCWTYETSIAVDMEVSDDLPYNDYFEYFGPHYRLHI 347


>gi|19112125|ref|NP_595333.1| histone deacetylase (class I) Clr6 [Schizosaccharomyces pombe
           972h-]
 gi|33300910|sp|O59702.1|CLR6_SCHPO RecName: Full=Histone deacetylase clr6; AltName: Full=Cryptic loci
           regulator 6
 gi|3135992|emb|CAA19053.1| histone deacetylase (class I) Clr6 [Schizosaccharomyces pombe]
 gi|4159997|gb|AAD05211.1| putative histone deacetylase [Schizosaccharomyces pombe]
          Length = 405

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/339 (59%), Positives = 262/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+SYFYD DVG+ ++GP HPMKPHR+ M H+LV++Y+L++K+ +  P +A   ++ + 
Sbjct: 5   KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL R+TPDT   F+    K+N+G+DCPVF+ L+EFC I AGG+I AA+ LN+ 
Sbjct: 65  HTDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSG 124

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINWAGGLHHAKK EASGFCY+ND+ L  LELLKYH RVLYIDIDVHHGDGVEE F
Sbjct: 125 NAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFF 184

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHKFG+ +FPGTG +K+ G   GK YA+NVPL+DGIDD S+  +FK +IS
Sbjct: 185 YTTDRVMTCSFHKFGE-YFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVIS 243

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            +++ + P A++LQCG DSLAGDRLGCFNLS+ GH+ CV FVK FNLP++  GGGGYT  
Sbjct: 244 HIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVR 303

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR WT ETG+L   EL   +P N+Y++Y+ P+  L +
Sbjct: 304 NVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNV 342


>gi|426201863|gb|EKV51786.1| hypothetical protein AGABI2DRAFT_198321 [Agaricus bisporus var.
           bisporus H97]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/344 (59%), Positives = 269/344 (78%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L++KMEI+R   A   E+ QF
Sbjct: 13  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYEKMEIFRAKPATKREMTQF 72

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYVEFL +ITP   + F +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+  
Sbjct: 73  HSDDYVEFLSKITPSNMNSFVKEQHKYNVGDDCPVFDGLFDYCSISAGGSMEGAARLSRD 132

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 133 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHHRVLYIDIDVHHGDGVEEAF 192

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DGI D ++  +F+ +I 
Sbjct: 193 YTTDRVMTVSFHKYGE-YFPGTGELRDVGVMKGKYYALNFPLRDGISDENYKSVFEPVIR 251

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+++Y P AIVLQCG DSL+GD+LGC NLS+ GHA+CVRFVK FN PLL+ GGGGYT  
Sbjct: 252 QVMQSYDPSAIVLQCGTDSLSGDKLGCLNLSMRGHADCVRFVKSFNKPLLLLGGGGYTMR 311

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NV+R W  ETG+    EL  +IP NEY +YF P+  L + + ++
Sbjct: 312 NVSRAWAFETGLAAGFELAPDIPVNEYYEYFGPDYRLDVKSSNV 355


>gi|222622422|gb|EEE56554.1| hypothetical protein OsJ_05884 [Oryza sativa Japonica Group]
          Length = 509

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/342 (63%), Positives = 266/342 (77%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL--HKKMEIYRPHKAYPVEL 60
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L    KME+ RP  A   +L
Sbjct: 22  QKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVLRPLPARDRDL 81

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ +CQ YAG ++ AA +L
Sbjct: 82  CRFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKL 141

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 142 NHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVE 201

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK 
Sbjct: 202 EAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP 260

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGGY
Sbjct: 261 IISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGY 320

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ETG+ L  EL  ++P NEY +YF PE SL +
Sbjct: 321 TIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSLYV 362


>gi|409083086|gb|EKM83443.1| hypothetical protein AGABI1DRAFT_110107 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 577

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/344 (59%), Positives = 269/344 (78%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L++KMEI+R   A   E+ QF
Sbjct: 13  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYEKMEIFRAKPATKREMTQF 72

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYVEFL +ITP   + F +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+  
Sbjct: 73  HSDDYVEFLSKITPSNMNSFVKEQHKYNVGDDCPVFDGLFDYCSISAGGSMEGAARLSRD 132

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 133 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHHRVLYIDIDVHHGDGVEEAF 192

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DGI D ++  +F+ +I 
Sbjct: 193 YTTDRVMTVSFHKYGE-YFPGTGELRDVGVMKGKYYALNFPLRDGISDENYKSVFEPVIR 251

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+++Y P AIVLQCG DSL+GD+LGC NLS+ GHA+CVRFVK FN PLL+ GGGGYT  
Sbjct: 252 QVMQSYDPSAIVLQCGTDSLSGDKLGCLNLSMRGHADCVRFVKSFNKPLLLLGGGGYTMR 311

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NV+R W  ETG+    EL  +IP NEY +YF P+  L + + ++
Sbjct: 312 NVSRAWAFETGLAAGFELAPDIPVNEYYEYFGPDYRLDVKSSNV 355


>gi|399218722|emb|CCF75609.1| unnamed protein product [Babesia microti strain RI]
          Length = 451

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/327 (63%), Positives = 256/327 (78%), Gaps = 5/327 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++YF+D D+GS Y+GP HPMKP R+ M H LVLSYDL++ ME++RPH+A   EL  FH 
Sbjct: 3   RVAYFHDPDIGSYYYGPGHPMKPQRIRMAHSLVLSYDLYRHMEVFRPHRAVEPELLSFHD 62

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           +DY+ FL  ++P+    F  +  ++N+GE  DCPVF+ LF+F Q  +G +ID A +LN+Q
Sbjct: 63  SDYICFLSSVSPENYLDFSYQSKRFNVGEATDCPVFDGLFDFQQSCSGASIDGAHKLNHQ 122

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI INW+GGLHHAK+ EASGFCYIND+VLGILELLKY+ RV+YIDID+HHGDGVEEAF
Sbjct: 123 QADICINWSGGLHHAKRSEASGFCYINDIVLGILELLKYYTRVMYIDIDIHHGDGVEEAF 182

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y T RVMTVSFHKFG+ FFPGTGD+ +IG   GK+Y++NVPL DGIDD SF  LFK II 
Sbjct: 183 YVTHRVMTVSFHKFGN-FFPGTGDITDIGMSTGKYYSVNVPLNDGIDDESFVDLFKVIIG 241

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K VE+Y PGAIVLQCGADSL GDRLG FNL+I GHA CV FVK+ N+PLLV GGGGYT  
Sbjct: 242 KCVESYRPGAIVLQCGADSLTGDRLGKFNLTIKGHAACVAFVKELNIPLLVLGGGGYTIR 301

Query: 304 NVARCWTVETGILLD--TELPNEIPEN 328
           NVARCW  ETG++LD   E+ N+I  N
Sbjct: 302 NVARCWAYETGVVLDKHNEMSNQITLN 328


>gi|14190351|gb|AAK55656.1| histone deacetylase RPD3 [Candida albicans]
          Length = 478

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/357 (57%), Positives = 269/357 (75%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+ ++G  H MKPHR+ M H L+++Y+L+KKMEIYR   A  +EL QF
Sbjct: 16  KRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD  H+  +E   +N+G+DCPVF+ L EFC+I  GG+++ A RLN  
Sbjct: 76  HTDEYIDFIDRVTPDNLHIIEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAIN+AGGLHHAKK EASGFCY ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAF
Sbjct: 136 QADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++AIN+PL+DGIDD S+  +F+ II+
Sbjct: 196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIIT 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   +P++V GGGGYT  
Sbjct: 255 KIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPMMVLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W +ETG+     LP E+P N Y +Y+AP  E  +R  N     S + +DK +
Sbjct: 315 NVARTWALETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKIL 371


>gi|401888469|gb|EJT52427.1| hypothetical protein A1Q1_04639 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 626

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/343 (60%), Positives = 273/343 (79%), Gaps = 2/343 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E++Q
Sbjct: 12  SKKRVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKQMEIFRAKPATKREMSQ 71

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FLHRITPD +  F +E  KYN+G+DCP+F+ LFE+C I AGG+++ A RL+ 
Sbjct: 72  FHTDEYVDFLHRITPDNEAQFAKEQVKYNVGDDCPIFDGLFEYCSISAGGSMEGAARLSR 131

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLY+DIDVHHGDGVEEA
Sbjct: 132 DKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHQRVLYVDIDVHHGDGVEEA 191

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTGDV++ G  +GK YA+NVPL+DG+ D ++  +F+ +I
Sbjct: 192 FYTTDRVMTCSFHKYGE-FFPGTGDVRDTGIGKGKGYAVNVPLRDGMSDANYASIFQPVI 250

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           ++++E Y PGAIVLQCG+DSL+GDRLG FNLS+ GHA CV+F+K F LPLL+ GGGGYT 
Sbjct: 251 TRIIEWYKPGAIVLQCGSDSLSGDRLGSFNLSMRGHAACVQFIKGFGLPLLMLGGGGYTV 310

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           ++V+R W  ETG+    EL + IP NEY +Y+ P+  L + PN
Sbjct: 311 KSVSRTWAYETGLAAGVELGSSIPNNEYYEYYGPDYELDVKPN 353


>gi|242776089|ref|XP_002478774.1| histone deacetylase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218722393|gb|EED21811.1| histone deacetylase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1130

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/340 (58%), Positives = 258/340 (75%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SYFYD D G   + P HPMKP R+ + H L+ +Y +H+KM++YR  +A  +E+ Q
Sbjct: 18  SKSRVSYFYDDDAGQYAYYPGHPMKPFRIRLAHELITTYGVHRKMQVYRAKRATAMEMTQ 77

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ DYV+FL RITPD    F     ++ + ED PVFE L+EFC I AGG+++ A  LN+
Sbjct: 78  FHTDDYVDFLRRITPDNIRQFPSAHAEFGIWEDNPVFEGLYEFCSISAGGSMEGAAHLNH 137

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINWAGGLHHAKK  A+GFCYIND+VLGILELL++H RVLYIDIDVHHGDGVEEA
Sbjct: 138 GKCDIAINWAGGLHHAKKSMANGFCYINDIVLGILELLRFHQRVLYIDIDVHHGDGVEEA 197

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           F  TDRVMTVSFH+FGD FFPGTGD+++IG   G+++A+NVPL+DGIDD S+  +F+ II
Sbjct: 198 FLTTDRVMTVSFHRFGD-FFPGTGDIRDIGVNRGRYHAVNVPLRDGIDDASYKSIFQPII 256

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             +++ + P AIV+QCG+DSL+GDRLG FNLS++GHA CV FVK F +P+LV GGGGYT 
Sbjct: 257 CGIMKHFRPEAIVMQCGSDSLSGDRLGSFNLSMEGHANCVSFVKTFGIPMLVLGGGGYTV 316

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVAR W  ET +L + EL   IP N + ++FAP+  L +
Sbjct: 317 RNVARAWANETAVLAEEELSPVIPYNTFYEHFAPDYMLEV 356


>gi|162459945|ref|NP_001104901.1| histone deacetylase [Zea mays]
 gi|4193320|gb|AAD10139.1| histone deacetylase [Zea mays]
          Length = 458

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/339 (59%), Positives = 259/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP+ A   ++ +F
Sbjct: 21  RRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASEADIRRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSDDYVAFLASATGNPGVLDPRAIKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMTVSFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDDT+F  LF+ II 
Sbjct: 201 FTTNRVMTVSFHKYGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDTTFRGLFQCIIK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+RF++ +N+P++V GGGGYT  
Sbjct: 260 KVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSYNVPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYTLHI 358


>gi|193783546|dbj|BAG53457.1| unnamed protein product [Homo sapiens]
          Length = 458

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/323 (63%), Positives = 263/323 (81%), Gaps = 1/323 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L++ L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNHGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct: 180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct: 240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query: 326 PENEYIKYFAPECSLRIPNGHIV 348
           P N+Y +YF P+  L I   ++ 
Sbjct: 300 PYNDYFEYFGPDFKLHISPSNMT 322


>gi|170086091|ref|XP_001874269.1| histone deacetylase complex, catalytic component RPD3 [Laccaria
           bicolor S238N-H82]
 gi|164651821|gb|EDR16061.1| histone deacetylase complex, catalytic component RPD3 [Laccaria
           bicolor S238N-H82]
          Length = 548

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 265/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ QF
Sbjct: 10  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQF 69

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV+FL RI P   + F +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+  
Sbjct: 70  HSDEYVDFLSRINPSNMNSFIKEQHKYNVGDDCPVFDGLFDYCSISAGGSMEGAARLSRD 129

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH+RVLYIDIDVHHGDGVEEAF
Sbjct: 130 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHSRVLYIDIDVHHGDGVEEAF 189

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DGI D ++  +F+ +I 
Sbjct: 190 YTTDRVMTVSFHKYGE-YFPGTGELRDVGVMKGKYYALNFPLRDGITDENYKSVFEPVIR 248

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+ETY P AIVLQCG DSL+GD+LGC NLS+ GHA CV+FVK FN PLL+ GGGGYT  
Sbjct: 249 QVMETYDPSAIVLQCGTDSLSGDKLGCLNLSMRGHANCVKFVKSFNKPLLLLGGGGYTMR 308

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R W  ETG+    EL  +IP NEY +YF P+  L +
Sbjct: 309 NVSRAWAYETGLAAGVELGPDIPVNEYYEYFGPDYELDV 347


>gi|218190315|gb|EEC72742.1| hypothetical protein OsI_06366 [Oryza sativa Indica Group]
          Length = 645

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/342 (62%), Positives = 266/342 (77%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL--HKKMEIYRPHKAYPVEL 60
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+ +Y L    KME+ RP  A  ++L
Sbjct: 22  QKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLANYGLLAPAKMEVLRPLPARGIDL 81

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV FL  +TP+TQ    + L ++N+G DCPVF+ L+ +CQ YAG ++ AA +L
Sbjct: 82  CRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKL 141

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 142 NHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVE 201

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK 
Sbjct: 202 EAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP 260

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II KV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGGY
Sbjct: 261 IIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGY 320

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ETG+ L  EL  ++P NEY +YF PE SL +
Sbjct: 321 TIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSLYV 362


>gi|194707608|gb|ACF87888.1| unknown [Zea mays]
 gi|413922017|gb|AFW61949.1| histone deacetylase [Zea mays]
          Length = 458

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/339 (59%), Positives = 259/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP+ A   ++ +F
Sbjct: 21  RRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASEADIRRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSDDYVAFLASATGNPGVLDPRAIKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMTVSFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDDT+F  LF+ II 
Sbjct: 201 FTTNRVMTVSFHKYGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDTTFRGLFQCIIK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+RF++ +N+P++V GGGGYT  
Sbjct: 260 KVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSYNVPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYTLHI 358


>gi|46805201|dbj|BAD17681.1| putative histone deacetylase HDAC3 [Oryza sativa Japonica Group]
 gi|49387953|dbj|BAD25051.1| putative histone deacetylase HDAC3 [Oryza sativa Japonica Group]
 gi|215736958|dbj|BAG95887.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 509

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/342 (63%), Positives = 266/342 (77%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL--HKKMEIYRPHKAYPVEL 60
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L    KM++ RP  A   +L
Sbjct: 22  QKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDL 81

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ +CQ YAG ++ AA +L
Sbjct: 82  CRFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKL 141

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 142 NHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVE 201

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK 
Sbjct: 202 EAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP 260

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGGY
Sbjct: 261 IISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGY 320

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ETG+ L  EL  ++P NEY +YF PE SL +
Sbjct: 321 TIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSLYV 362


>gi|83770222|dbj|BAE60355.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 430

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 202/343 (58%), Positives = 266/343 (77%), Gaps = 3/343 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           +SK +++YFYD DVG+  +   HPMKPHR+ M H L+L+Y L+KKMEIYR   A   E+ 
Sbjct: 17  QSKRRVAYFYDSDVGNYAYVSGHPMKPHRMRMAHSLILNYGLYKKMEIYRAKPATKYEMT 76

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +FHS +Y++FL ++TPDT      E  KYN  +D PV++ L EFC I AGG+++AA RLN
Sbjct: 77  RFHSDEYIDFLFKVTPDTISKHLTEQVKYNFNDDNPVWDGLSEFCSISAGGSMEAAARLN 136

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N+ CDIAINWAGGLHHAKK EA+GFCY+ND+VLGILELL++H RVLYIDIDVHHGDGVEE
Sbjct: 137 NRKCDIAINWAGGLHHAKKSEANGFCYVNDIVLGILELLRFHPRVLYIDIDVHHGDGVEE 196

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFH++GD FFPGTGD+ +IG  EGK +++NVPL+ G+DD S++R+F+ +
Sbjct: 197 AFYTTDRVMTVSFHQYGD-FFPGTGDIGDIGVSEGKNHSVNVPLRPGMDDVSYSRVFQRV 255

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V++ Y P A+VLQCG DSL+GDRLG FNLS+ GHA CV +VK FNLP ++ GGGGYT
Sbjct: 256 IKGVMDWYRPDAVVLQCGGDSLSGDRLGSFNLSMRGHANCVNYVKSFNLPTMLVGGGGYT 315

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYI--KYFAPECSLRI 342
             NVAR W  ETG+++  E+  ++P +++   +Y+AP+  L +
Sbjct: 316 MRNVARTWAFETGVVVGEEVGPDLPYDDFYGHQYYAPDYILDV 358


>gi|403160872|ref|XP_003321297.2| histone deacetylase 1/2 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|375170431|gb|EFP76878.2| histone deacetylase 1/2 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 632

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/361 (58%), Positives = 273/361 (75%), Gaps = 5/361 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I YF+D D+G+ ++GP HPMKPHR+ MTH LV++Y L+KKMEI+R   A   E+AQF
Sbjct: 13  KKRICYFFDSDIGNYHYGPGHPMKPHRIRMTHALVMNYGLYKKMEIFRAKPATRKEMAQF 72

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV+FL ++TPD    F +E  K+NLG+DCPVF+ LFE+C I AGG+++ A RL+  
Sbjct: 73  HTDDYVDFLSKVTPDNMEEFAKEQAKFNLGDDCPVFDGLFEYCSISAGGSMEGAARLSRD 132

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EA+GFCY+ND+VLGILELL+YH RVLY+DIDVHHGDGVEEAF
Sbjct: 133 KCDIAVNWAGGLHHAKKAEANGFCYVNDIVLGILELLRYHKRVLYVDIDVHHGDGVEEAF 192

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTG++++ G  +GK YA+N PL+DGI D ++  +F+ +I 
Sbjct: 193 YTTDRVMTCSFHKYGE-FFPGTGELRDTGHGKGKHYAVNFPLRDGITDEAYKNIFEPVIM 251

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++ETY P AIVLQCG DSL+GDRLG FN+S+ GHA CVRF+K   LPLL+ GGGGYT  
Sbjct: 252 KIMETYQPSAIVLQCGGDSLSGDRLGSFNVSMRGHANCVRFIKSLGLPLLLLGGGGYTIR 311

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI----VCSFKEIDKFIL 359
           NV+R W  ETG+    EL  +IP NEY +YF P   L +P  ++    V  + E  K  +
Sbjct: 312 NVSRTWAYETGLAAGQELCTDIPMNEYYEYFGPTYRLDVPPSNMEDMNVVKYLEKTKIQI 371

Query: 360 F 360
           F
Sbjct: 372 F 372


>gi|31324095|gb|AAP47172.1| histone deacetylase HDAC2 [Oryza sativa Japonica Group]
          Length = 498

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/342 (63%), Positives = 266/342 (77%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL--HKKMEIYRPHKAYPVEL 60
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L    KM++ RP  A   +L
Sbjct: 22  QKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDL 81

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ +CQ YAG ++ AA +L
Sbjct: 82  CRFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKL 141

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 142 NHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVE 201

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK 
Sbjct: 202 EAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP 260

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGGY
Sbjct: 261 IISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGY 320

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ETG+ L  EL  ++P NEY +YF PE SL +
Sbjct: 321 TIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSLYV 362


>gi|115445009|ref|NP_001046284.1| Os02g0214900 [Oryza sativa Japonica Group]
 gi|31324097|gb|AAP47173.1| histone deacetylase HDAC3 [Oryza sativa Japonica Group]
 gi|49387950|dbj|BAD25048.1| histone deacetylase HDAC3 [Oryza sativa Japonica Group]
 gi|113535815|dbj|BAF08198.1| Os02g0214900 [Oryza sativa Japonica Group]
          Length = 510

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/342 (63%), Positives = 266/342 (77%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL--HKKMEIYRPHKAYPVEL 60
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L    KME+ RP  A  ++L
Sbjct: 22  QKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVLRPLPARGIDL 81

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV FL  +TP+TQ    + L ++N+G DCPVF+ L+ +CQ YAG ++ AA +L
Sbjct: 82  CRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKL 141

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 142 NHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVE 201

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK 
Sbjct: 202 EAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP 260

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGGY
Sbjct: 261 IISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGY 320

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ETG+ L  EL  ++P NEY +YF PE SL +
Sbjct: 321 TIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSLYV 362


>gi|116181286|ref|XP_001220492.1| hypothetical protein CHGG_01271 [Chaetomium globosum CBS 148.51]
 gi|88185568|gb|EAQ93036.1| hypothetical protein CHGG_01271 [Chaetomium globosum CBS 148.51]
          Length = 670

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/383 (54%), Positives = 270/383 (70%), Gaps = 28/383 (7%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIY------------- 50
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++YD++K +EIY             
Sbjct: 24  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYDVYKFLEIYVSLLLCGGTCLLR 83

Query: 51  ------------RPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPV 98
                       R   A   E+ QFH+ +Y+EFL ++TPD    F +E  KYN+G+DCPV
Sbjct: 84  TLADGVCLASKQRAKPAVTSEMTQFHTDEYIEFLQKVTPDNMDGFMREQGKYNVGDDCPV 143

Query: 99  FENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILE 158
           F+ LFEFC I AGG+++ A RLN + CDIAINWAGGLHHAKK EASGFCY+ND+VL ILE
Sbjct: 144 FDGLFEFCGISAGGSMEGAARLNREKCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILE 203

Query: 159 LLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKF 218
           LL++  RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTG++++IG   GK 
Sbjct: 204 LLRFKKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGELRDIGIGNGKH 262

Query: 219 YAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGH 278
           YA+N PL+DGIDDT++  +F+ +I  V++ + P A+VLQCG DSL+GDRLGCFNLS+ GH
Sbjct: 263 YAVNFPLRDGIDDTTYDTIFEPVIEAVMKYFQPEAVVLQCGGDSLSGDRLGCFNLSMRGH 322

Query: 279 AECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAP-- 336
           A CV FV+ FNLP LV GGGGYT  NVAR W  ETG L+  E+ + +P NEY  Y+ P  
Sbjct: 323 ANCVNFVRSFNLPTLVLGGGGYTMRNVARTWAYETGRLVGVEMDSVLPYNEYYTYYGPDY 382

Query: 337 ECSLRIPNGHIVCSFKEIDKFIL 359
           E  +R  N     S++ ++K  +
Sbjct: 383 ELDVRSSNMENANSYEYLEKIKI 405


>gi|17017398|gb|AAL33653.1|AF440226_1 histone deacetylase [Zea mays]
          Length = 436

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 202/337 (59%), Positives = 258/337 (76%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP+ A   ++ +FHS
Sbjct: 1   RVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASEADIRRFHS 60

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DYV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN    
Sbjct: 61  DDYVAFLASATGNPGVLDPRAIKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDA 120

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF+ 
Sbjct: 121 DITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFT 180

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           T+RVMTVSFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDDT+F  LF+ II KV
Sbjct: 181 TNRVMTVSFHKYGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDTTFRGLFQCIIKKV 239

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+RF++ +N+P++V GGGGYT  NV
Sbjct: 240 MEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSYNVPMMVLGGGGYTIRNV 299

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           ARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 300 ARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYTLHI 336


>gi|345565659|gb|EGX48608.1| hypothetical protein AOL_s00080g237 [Arthrobotrys oligospora ATCC
           24927]
          Length = 704

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/337 (60%), Positives = 259/337 (76%), Gaps = 3/337 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+AQFH+ +YV+FL ++TPD    F
Sbjct: 99  HPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATRKEMAQFHTDEYVDFLWKVTPDNMDQF 158

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +E TKYN+G+DCPVF+ LFEFC I  GG+++ A RLN + CDIAINWAGGLHHAKK EA
Sbjct: 159 TKEQTKYNVGDDCPVFDGLFEFCGISGGGSMEGAARLNREKCDIAINWAGGLHHAKKSEA 218

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCYIND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 219 SGFCYINDIVLGIIELLRYKKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 277

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTG++++IG   GK+YA+N PL+DGI D ++  +F+ +I  V++ Y P A+VLQCG DSL
Sbjct: 278 GTGELRDIGVGLGKYYAVNFPLRDGITDETYKSIFEPVIGAVMQWYQPEAVVLQCGGDSL 337

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 323
           +GDRLGCFNLS+ GHA CV FVK FNLP+LV GGGGYT  NV+R W  ETG+L+   L  
Sbjct: 338 SGDRLGCFNLSMRGHANCVGFVKSFNLPVLVLGGGGYTMRNVSRTWCYETGVLVGQNLTP 397

Query: 324 EIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
            +P  ++ +YF P  E  +R  N   + S + +DK +
Sbjct: 398 TLPYCDFYEYFGPDYELDVRPSNMENLNSKEYLDKIL 434


>gi|218190318|gb|EEC72745.1| hypothetical protein OsI_06369 [Oryza sativa Indica Group]
          Length = 510

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/340 (63%), Positives = 265/340 (77%), Gaps = 3/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL--HKKMEIYRPHKAYPVEL 60
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L    KM++ RP  A   +L
Sbjct: 22  QKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDL 81

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV FL  +TP+TQ    + L ++N+GEDCPVF+ L+ +CQ YAG ++ AA +L
Sbjct: 82  CRFHSDDYVAFLRAVTPETQLDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKL 141

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGVE
Sbjct: 142 NHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVE 201

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK 
Sbjct: 202 EAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP 260

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           IISKV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGGY
Sbjct: 261 IISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGY 320

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NVARCW  ETG+ L  EL  ++P NEY +YF PE SL
Sbjct: 321 TIRNVARCWCYETGVALGEELREKLPYNEYYEYFGPEYSL 360


>gi|393247958|gb|EJD55465.1| hypothetical protein AURDEDRAFT_109783 [Auricularia delicata
           TFB-10046 SS5]
          Length = 575

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 266/339 (78%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E+ QF
Sbjct: 13  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKQMEIFRAKPATKREMTQF 72

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYV+FL++ITP+  + + +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RL+  
Sbjct: 73  HSDDYVDFLNKITPNNMNQYVREQSKYNVGDDCPVFDGLFEFCSISAGGSMEGAARLSRD 132

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINW+GGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 133 KCDIAINWSGGLHHAKKGEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEAF 192

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+Y+ N PL+DGI D ++  +F+ +I 
Sbjct: 193 YTTDRVMTVSFHKYGE-YFPGTGELRDVGFSKGKYYSCNFPLRDGITDENYRSVFQPVIR 251

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y PGAIVLQCG DSL+GD+LGC NLS+ GHA+CV FVK F  PLL+ GGGGYT  
Sbjct: 252 GVMENYNPGAIVLQCGTDSLSGDKLGCLNLSMRGHADCVAFVKSFGRPLLLLGGGGYTMR 311

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R W  ETG+    EL ++IP NEY +YF P+  L +
Sbjct: 312 NVSRAWAYETGLAAGVELADDIPVNEYYEYFGPDHKLDV 350


>gi|354544845|emb|CCE41570.1| hypothetical protein CPAR2_801220 [Candida parapsilosis]
          Length = 491

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/357 (57%), Positives = 267/357 (74%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+ ++G  H MKPHR+ MTH L+++Y+L+KKMEIYR   A  +EL QF
Sbjct: 16  KRRIAYFYDQDVGNYFYGTGHCMKPHRIRMTHSLIMNYELYKKMEIYRAEPATNLELTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD  HLF +E   +N+GEDCPVF+ L EFC+I  GG+++ A RLNN 
Sbjct: 76  HTDEYIDFIDRVTPDNLHLFPREAQIFNVGEDCPVFDGLNEFCKISCGGSMEGAARLNNG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI IN+AGGLHHAKK EASGFCY ND+VL I+ELL+ H RVLYID DVHHGDGVEEAF
Sbjct: 136 SADIVINYAGGLHHAKKSEASGFCYTNDIVLAIVELLRKHPRVLYIDTDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++A+NVPL+DGIDD S+  +F+ ++ 
Sbjct: 196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAVNVPLRDGIDDASYKSIFEPLVK 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            +V+ Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   LP++V GGGGYT  
Sbjct: 255 TIVDWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGLPMMVLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+     LP E+P N Y +Y+AP  E  +R  N +   S + +DK +
Sbjct: 315 NVARTWAFETGVCNGVILPKELPYNGYYEYYAPTYELDVRSSNMNNANSKEYLDKLL 371


>gi|308476026|ref|XP_003100230.1| hypothetical protein CRE_21947 [Caenorhabditis remanei]
 gi|308265754|gb|EFP09707.1| hypothetical protein CRE_21947 [Caenorhabditis remanei]
          Length = 459

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 197/340 (57%), Positives = 261/340 (76%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ +I+Y+YD ++G+ Y+G  H MKP+R+ M HHL+L+Y +++ + I+RP  A   E+++
Sbjct: 14  SRRRIAYYYDANIGNYYYGVEHVMKPNRIRMAHHLILNYGMYRHLGIFRPFPATVEEMSR 73

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+  Y+EFL + TPD  +     + KYN+GEDCPVF+ LFEFCQ+ +GG++ AA +LN 
Sbjct: 74  FHNPGYLEFLKKATPDNLNRLGGGMLKYNVGEDCPVFDGLFEFCQLSSGGSLAAAIKLNK 133

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEA
Sbjct: 134 KRADIAINWMGGLHHAKKGEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEA 193

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD FFPGTGD+K  G   GK +++NVPLK  I+D S+  +FK ++
Sbjct: 194 FYTTDRVMTVSFHKFGD-FFPGTGDIKTTGHGIGKNFSVNVPLKSDINDQSYQSIFKPVM 252

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+E + P AIVLQCGADSL GD LG FN+++ GH ECVRF++ FN+P+++ GGGGY+ 
Sbjct: 253 QRVIERFEPAAIVLQCGADSLNGDPLGRFNMTLKGHGECVRFLRSFNIPMMLLGGGGYSP 312

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ET I  + EL N+IP N+++++F P   L I
Sbjct: 313 NNVARCWAYETAIACNVELSNDIPSNDFMEFFGPNYKLHI 352


>gi|242078961|ref|XP_002444249.1| hypothetical protein SORBIDRAFT_07g018230 [Sorghum bicolor]
 gi|241940599|gb|EES13744.1| hypothetical protein SORBIDRAFT_07g018230 [Sorghum bicolor]
          Length = 458

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/339 (59%), Positives = 257/339 (75%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP+ A   ++ +F
Sbjct: 21  RRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASEADIRRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSDDYVAFLASATGNPSVLDPRAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMTVSFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDD +F  LF+ II 
Sbjct: 201 FTTNRVMTVSFHKYGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDATFRDLFQCIIK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+RF++ +N+P++V GGGGYT  
Sbjct: 260 KVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSYNVPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+  L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYILHI 358


>gi|47219554|emb|CAG09908.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 486

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/356 (58%), Positives = 270/356 (75%), Gaps = 17/356 (4%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANGEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 68  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSVGGSVAGAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK--- 239
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK   
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPAR 246

Query: 240 --------TIISKVVETYAPGAIVLQCG-----ADSLAGDRLGCFNLSIDGHAECVRFVK 286
                    ++ +       G +  QCG     +DSL+GDRLGCFNL+I GHA+CV ++K
Sbjct: 247 ARLLLSVTEVVPRADNGQGDGDVPAQCGGSPVRSDSLSGDRLGCFNLTIKGHAKCVEYMK 306

Query: 287 KFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            FNLPLL+ GGGGYT  NVARCWT ET + LD  +PNE+P N+Y +YF P+  L I
Sbjct: 307 SFNLPLLMLGGGGYTIRNVARCWTYETAVALDASIPNELPYNDYFEYFGPDFKLHI 362


>gi|296423533|ref|XP_002841308.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637545|emb|CAZ85499.1| unnamed protein product [Tuber melanosporum]
          Length = 642

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 196/317 (61%), Positives = 252/317 (79%), Gaps = 1/317 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH L+++Y L+KKMEIYR   A   E+ QFH+ +Y++FL ++TPD    + +
Sbjct: 1   MKPHRIRMTHSLIMNYRLYKKMEIYRAKPATKQEMCQFHTDEYIDFLSKVTPDNMEQYSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           E  KYN+G+DCPVF+ LFEFC I  GG+++ A RLN   CDIAINWAGGLHHAKK EASG
Sbjct: 61  EQGKYNVGDDCPVFDGLFEFCGISGGGSMEGAARLNRGKCDIAINWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VLGI+ELL+Y  RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLGIIELLRYKQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           G++++IG   GK+YA+N PL+DGI DT++  +F+ +I  V+E Y P A+VLQCGADSL+G
Sbjct: 180 GELRDIGVGAGKYYAVNFPLRDGITDTTYKEVFEPVIGHVMEFYQPDAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLS+ GHA CV +VKKFNLP LV GGGGYT  NV+R WT ETGIL++ ++   +
Sbjct: 240 DRLGCFNLSMAGHANCVEYVKKFNLPTLVVGGGGYTMRNVSRAWTYETGILVNQKVGPNL 299

Query: 326 PENEYIKYFAPECSLRI 342
           P +++ +YF P+  L +
Sbjct: 300 PFSDFYEYFGPDYELDV 316


>gi|242221226|ref|XP_002476366.1| predicted protein [Postia placenta Mad-698-R]
 gi|220724395|gb|EED78441.1| predicted protein [Postia placenta Mad-698-R]
          Length = 448

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/346 (60%), Positives = 267/346 (77%), Gaps = 2/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ YF+D DV   ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ Q
Sbjct: 13  NKKRVCYFFDSDVSGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQ 72

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YVEFL RITP+    + +E  KYN+G+DCPVF+ LFE+C I AGG+++ A RL+ 
Sbjct: 73  FHSDEYVEFLSRITPNNMLNYSKEQHKYNVGDDCPVFDGLFEYCSISAGGSMEGAARLSR 132

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYIN-DLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
             CDIA+NWAGGLHHAKK EASGFCY+N D+VLGILELL+YH RVLYIDIDVHHGDGVEE
Sbjct: 133 NKCDIAVNWAGGLHHAKKSEASGFCYVNEDIVLGILELLRYHTRVLYIDIDVHHGDGVEE 192

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+N+PL+DGI D S+  +F+ +
Sbjct: 193 AFYTTDRVMTCSFHKYGE-FFPGTGELRDIGIGKGKHYAMNLPLRDGITDESYKSVFEPV 251

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V+E Y PGAIVLQCG DSL+GD+LGC NLS+ GHA CV+FVK FN PLL+ GGGGYT
Sbjct: 252 IQSVMEHYDPGAIVLQCGTDSLSGDKLGCLNLSMRGHASCVKFVKSFNKPLLLLGGGGYT 311

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
             NV+RCW  ETG+    EL  EIP NEY +YF P+  L + + ++
Sbjct: 312 MRNVSRCWAYETGLAAGVELGKEIPMNEYYEYFGPDYELDVKSSNM 357


>gi|240279524|gb|EER43029.1| histone deacetylase RpdA [Ajellomyces capsulatus H143]
          Length = 667

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/358 (56%), Positives = 267/358 (74%), Gaps = 15/358 (4%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIY            F
Sbjct: 18  KKRVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIY------------F 65

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 66  HTDEYIDFLAKVTPDNMDSYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 125

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 126 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 185

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK Y++N PL+DGI+D S+  +F+ +I 
Sbjct: 186 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYSVNFPLRDGIEDVSYKGIFEPVIK 244

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 245 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 304

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 305 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 362


>gi|154422069|ref|XP_001584047.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121918292|gb|EAY23061.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 430

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 196/342 (57%), Positives = 260/342 (76%), Gaps = 1/342 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +K ++ YFYD D+G+ Y+ PNHPMKPHR+ M H+L+L+YDL  KM + RP +A   ++
Sbjct: 1   MSTKQRVVYFYDEDIGNFYYAPNHPMKPHRVRMAHNLILAYDLLPKMRVLRPRRATATDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS +YV+FL  + P+ +        K+N+GED P+FE LFEFCQI AG +I AA+ L
Sbjct: 61  TRFHSDEYVQFLQMVNPENEGKQNGLFDKFNVGEDSPIFEGLFEFCQISAGSSISAAQEL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN   DIAINWAGGLHHAKK EASGFCY+ D VLGIL+LL+ + RV+YIDID+HHGDGVE
Sbjct: 121 NNGTADIAINWAGGLHHAKKAEASGFCYVADCVLGILKLLERYERVMYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY +DRV+TVSFHK+G+ FFPGTG   ++G   GK Y++NVPL DG+DD S+  +F+ 
Sbjct: 181 EAFYTSDRVLTVSFHKYGE-FFPGTGHWTDVGLGRGKHYSVNVPLNDGMDDISYQNIFRP 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           I+S++VE Y P AI+LQCGADSL GDRLG FNL+I GHA CV ++K F +P++VTGGGGY
Sbjct: 240 IMSRLVEWYRPQAILLQCGADSLTGDRLGSFNLTIKGHASCVEYMKSFGIPMIVTGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ET ++L  E+ +++P N+Y+ Y+ P+  L +
Sbjct: 300 TVRNVARCWAYETAVVLGEEIEDKLPYNDYLGYYGPDYRLHL 341


>gi|300175746|emb|CBK21289.2| unnamed protein product [Blastocystis hominis]
          Length = 443

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 196/344 (56%), Positives = 267/344 (77%), Gaps = 3/344 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M SKD+I+YFY GD+ + Y+GP HPMKP RL +TH+L+L+Y L++ +E+Y+PHKA   EL
Sbjct: 1   MSSKDRIAYFYHGDLPNYYYGPGHPMKPQRLRLTHNLLLTYKLYRFLEVYKPHKASAEEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
            +FH+ DY++FL  I P     ++  + KY++    D PVF+ +++FC +Y G ++DAA 
Sbjct: 61  ERFHTKDYIDFLSNINPGIIDSYKDSMQKYSMSNEADNPVFDGIYDFCSMYTGASLDAAS 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           RLN  L  + INW+GGLHHAKK EASGFCYIND+VL ILELLK   RV+Y+DIDVHHGDG
Sbjct: 121 RLNQGLNQVCINWSGGLHHAKKAEASGFCYINDIVLAILELLKVFPRVMYVDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY T+RVMTVSFHK+G+ +FPGTG+V ++G++EG  YA+N+PLKDG+ D ++  +F
Sbjct: 181 VEEAFYLTNRVMTVSFHKYGN-YFPGTGNVSDVGQKEGANYAVNIPLKDGMTDNAYKYIF 239

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + II+K VET+ PGAIV+ CGADS+ GDRLGCFNL++ GHA CV F++K NLP+LV GGG
Sbjct: 240 EPIITKCVETFQPGAIVMCCGADSVTGDRLGCFNLTLRGHAACVEFIRKLNLPMLVLGGG 299

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           GYT +NV+R W+ ET +LL  E+ +EIP N +I+++AP   L +
Sbjct: 300 GYTIKNVSRTWSYETAVLLRKEVSDEIPYNNFIEWYAPTYKLHL 343


>gi|226292946|gb|EEH48366.1| histone deacetylase RPD3 [Paracoccidioides brasiliensis Pb18]
          Length = 677

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/358 (56%), Positives = 267/358 (74%), Gaps = 15/358 (4%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++YFYD DVG+  +   HPMKPHR+ M H LV++Y L+KKMEIY            F
Sbjct: 19  RKRVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLVMNYGLYKKMEIY------------F 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 67  HTDEYIDFLAKVTPDNMDSYVKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 126

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAF
Sbjct: 127 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAF 186

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGI+D S+  +F+ +I 
Sbjct: 187 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKHYAVNFPLRDGIEDISYKGIFEPVIK 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++V+ F +P ++ GGGGYT  
Sbjct: 246 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVRSFGIPTMIVGGGGYTMR 305

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFIL 359
           NVAR W  ETGIL+  +L  E+P N+Y +YF+P  E  +R  N     S + +DK  +
Sbjct: 306 NVARTWCFETGILVGEQLGTELPYNDYYEYFSPDYELDVRPSNMDNANSKEYLDKIRM 363


>gi|448508569|ref|XP_003865960.1| Rpd3 hypothetical proteinistone deacetylase [Candida orthopsilosis
           Co 90-125]
 gi|380350298|emb|CCG20519.1| Rpd3 hypothetical proteinistone deacetylase [Candida orthopsilosis
           Co 90-125]
          Length = 491

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/357 (57%), Positives = 266/357 (74%), Gaps = 3/357 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+ ++G  H MKPHR+ MTH L+++Y+L+K MEIYR   A  +EL QF
Sbjct: 16  KRRIAYFYDQDVGNYFYGTGHCMKPHRIRMTHSLIMNYELYKNMEIYRAEPATNLELTQF 75

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++F+ R+TPD  HLF +E   +N+GEDCPVF+ L EFC+I  GG+++ A RLNN 
Sbjct: 76  HTDEYIDFIDRVTPDNLHLFPREAQIFNVGEDCPVFDGLNEFCKISCGGSMEGAARLNNG 135

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI IN+AGGLHHAKK EASGFCY ND+VL I+ELL+ H RVLYID DVHHGDGVEEAF
Sbjct: 136 SADIVINYAGGLHHAKKSEASGFCYTNDIVLAIIELLRKHPRVLYIDTDVHHGDGVEEAF 195

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++A+NVPL+DGIDD S+  +F+ +I 
Sbjct: 196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAVNVPLRDGIDDASYKSIFEPVIK 254

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            +V+ Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   LP++V GGGGYT  
Sbjct: 255 TIVDWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGLPMMVLGGGGYTIR 314

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP--ECSLRIPNGHIVCSFKEIDKFI 358
           NVAR W  ETG+     LP E+P N Y +Y+AP  E  +R  N +   S + +D+ +
Sbjct: 315 NVARTWAFETGVCNGVILPKELPYNGYYEYYAPTYELDVRSSNMNNANSKEYLDRLL 371


>gi|241747530|ref|XP_002414330.1| histone deacetylase 1, 2 ,3, putative [Ixodes scapularis]
 gi|215508184|gb|EEC17638.1| histone deacetylase 1, 2 ,3, putative [Ixodes scapularis]
          Length = 392

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/338 (60%), Positives = 267/338 (78%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK  + YF+D DVG+ ++GP HPMKP RL +TH LVL Y L+KKM+  +   +   ++ +
Sbjct: 7   SKKNVMYFWDPDVGNFHYGPGHPMKPQRLSVTHSLVLHYGLYKKMQASQLSSSNSHDMCR 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y++FL R+TP     F + L+ +N+G+DCPVF+ L++FC +Y G +++ A +LNN
Sbjct: 67  FHSEEYIDFLERVTPQNIQTFTKSLSHFNVGDDCPVFDGLYDFCSMYTGASLEGAVKLNN 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           + CDIAINW+GGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 127 ECCDIAINWSGGLHHAKKFEASGFCYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVQEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y++NVPLK+GIDD S+ ++FK +I
Sbjct: 187 FYLTDRVMTVSFHKYGNYFFPGTGDMYELGAESGRYYSVNVPLKEGIDDASYFQVFKPVI 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E + P  IVLQCGADSLAGDRLGCFNLSI GH ECVRF+++  LPLLV GGGGYT 
Sbjct: 247 QGVMEFFQPSCIVLQCGADSLAGDRLGCFNLSIRGHGECVRFIRELGLPLLVLGGGGYTV 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVAR WT ET +L+D  + +EIP NEY +YFAP+ +L
Sbjct: 307 RNVARAWTYETALLVDEPVSSEIPYNEYFEYFAPDFTL 344


>gi|395816818|ref|XP_003781884.1| PREDICTED: histone deacetylase 2-like [Otolemur garnettii]
          Length = 634

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/311 (65%), Positives = 258/311 (82%), Gaps = 1/311 (0%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL
Sbjct: 201 GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 260

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWA
Sbjct: 261 RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWA 320

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTV
Sbjct: 321 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTV 380

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P 
Sbjct: 381 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPS 439

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT E
Sbjct: 440 AVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYE 499

Query: 313 TGILLDTELPN 323
           T + LD E+PN
Sbjct: 500 TAVALDCEIPN 510


>gi|302694911|ref|XP_003037134.1| hypothetical protein SCHCODRAFT_72852 [Schizophyllum commune H4-8]
 gi|300110831|gb|EFJ02232.1| hypothetical protein SCHCODRAFT_72852 [Schizophyllum commune H4-8]
          Length = 530

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 264/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ QF
Sbjct: 10  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQF 69

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV+FL +ITP   +   +E  KYN+G+DCP+F+ LFE+C I AGG+++ A RL+  
Sbjct: 70  HSDEYVDFLSKITPVNMNSHVREQHKYNVGDDCPIFDGLFEYCSISAGGSMEGAARLSRD 129

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 130 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEAF 189

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DGI D ++  +F+ +I 
Sbjct: 190 YTTDRVMTVSFHKYGE-YFPGTGELRDVGVVKGKYYALNFPLRDGITDDNYKSVFEPVIR 248

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V+ETY P A+VLQCG DSL+GD+LGCFNLS+ GHA CV+FVK FN PLL+ GGGGYT  
Sbjct: 249 SVMETYDPSAVVLQCGTDSLSGDKLGCFNLSMRGHANCVKFVKSFNKPLLLLGGGGYTMR 308

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R W  ETG+    EL  EIP NEY +YF P+  L +
Sbjct: 309 NVSRAWAYETGLAAGVELQPEIPVNEYYEYFGPDYQLDV 347


>gi|115442738|ref|XP_001218176.1| histone deacetylase RPD3 [Aspergillus terreus NIH2624]
 gi|114188045|gb|EAU29745.1| histone deacetylase RPD3 [Aspergillus terreus NIH2624]
          Length = 675

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/337 (60%), Positives = 250/337 (74%), Gaps = 25/337 (7%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIY               
Sbjct: 20  KVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLYKKMEIY--------------- 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
                    +TPD    F +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN   C
Sbjct: 65  ---------VTPDNMDSFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKC 115

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAFY 
Sbjct: 116 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAFYT 175

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+G+ +FPGTG++++IG   GK+YA+N PL+DGIDD S+  +F+ +I  V
Sbjct: 176 TDRVMTVSFHKYGE-YFPGTGELRDIGVGHGKYYAVNFPLRDGIDDVSYKSIFEPVIKSV 234

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV FVK FNLP L+ GGGGYT  NV
Sbjct: 235 MEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNFVKSFNLPTLILGGGGYTMRNV 294

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           AR W  ETGIL+   L  E+P N+Y +YFAP+  L +
Sbjct: 295 ARTWAFETGILVGDNLGAELPYNDYYEYFAPDYELDV 331


>gi|358057427|dbj|GAA96776.1| hypothetical protein E5Q_03447 [Mixia osmundae IAM 14324]
          Length = 490

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/340 (60%), Positives = 265/340 (77%), Gaps = 1/340 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++ YF+D D+ + ++G  HPMKPHR+ MTH L ++Y L+K+MEI+R   A   E+AQF
Sbjct: 12  RKRVCYFFDSDIANHHYGSGHPMKPHRIKMTHSLTMNYGLYKRMEIFRAKPATRKEMAQF 71

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +YVE L RITPD    + +E  K+N+G+DCPVF+ LFE+C I AGG+++ A RL+  
Sbjct: 72  HTDEYVELLARITPDNMEAYAREQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRD 131

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCYIND+VLGILELL+YH+RVLY+DIDVHHGDGVEEAF
Sbjct: 132 KCDIAINWAGGLHHAKKAEASGFCYINDIVLGILELLRYHSRVLYVDIDVHHGDGVEEAF 191

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHKFG+ FFPGTG++++IG  +GK Y++N PL+DGI D ++  +F+ +IS
Sbjct: 192 YTTDRVMTCSFHKFGE-FFPGTGELRDIGHGKGKHYSVNFPLRDGITDENYRSVFEPVIS 250

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           K++E Y P A+VLQCG+DSL+GDRLG FNLS+ GHA CV F+K F LPLL+ GGGGYT  
Sbjct: 251 KIMEFYRPSAVVLQCGSDSLSGDRLGSFNLSMRGHANCVSFIKSFGLPLLLLGGGGYTIR 310

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           NV+R W  ETG+    EL +EIP NEY +YF P   L +P
Sbjct: 311 NVSRAWAYETGLAAGMELGSEIPMNEYYEYFGPTYRLDVP 350


>gi|170578252|ref|XP_001894336.1| histone deacetylase 1 (HD1) [Brugia malayi]
 gi|158599157|gb|EDP36848.1| histone deacetylase 1 (HD1), putative [Brugia malayi]
          Length = 464

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/342 (59%), Positives = 263/342 (76%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YDGDVG+ Y+G  HPMKPHR+ M H+L+L+Y L+++ME+YRPH A   E+ +
Sbjct: 11  SKIRVAYYYDGDVGNYYYGQGHPMKPHRIRMAHNLILNYGLYRRMEVYRPHVATFEEMTK 70

Query: 63  FHSADYVEFLHRITPD--TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           +HS DY+ FL    P+        +   +YN+GEDCPVF+ ++EFCQ   GG++ AA +L
Sbjct: 71  YHSNDYLTFLKNARPEDXIDSNTAKARQRYNVGEDCPVFDGMYEFCQTSCGGSLAAAAKL 130

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N +  DI INW GGLHHAKK EASGFCY ND+VL ILELL +H RVLY+DIDVHHGDGVE
Sbjct: 131 NKKQADITINWMGGLHHAKKSEASGFCYTNDIVLAILELLNHHQRVLYVDIDVHHGDGVE 190

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHKFG+ +FPGTGD+++IG   GK+YA+N PL DGIDD ++  +F+ 
Sbjct: 191 EAFYTTDRVMTVSFHKFGE-YFPGTGDIQDIGSGRGKYYAVNCPLHDGIDDDTYQSIFRA 249

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++ +V+ +Y P AIVLQCGADSL GDRLGCFNLS+ GH +CV F+KKFNLPLL+ GGGGY
Sbjct: 250 VMEQVMLSYQPSAIVLQCGADSLVGDRLGCFNLSLKGHGKCVEFMKKFNLPLLLLGGGGY 309

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ET I LD E+ NE+P N+Y +Y++ +  L I
Sbjct: 310 TIRNVARCWAYETAIALDVEISNELPYNDYFEYYSNDFKLHI 351


>gi|222641212|gb|EEE69344.1| hypothetical protein OsJ_28666 [Oryza sativa Japonica Group]
          Length = 458

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/339 (58%), Positives = 257/339 (75%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP+ A   ++ +F
Sbjct: 21  RRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMT SFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDD +F  LF+ II 
Sbjct: 201 FTTNRVMTCSFHKYGD-FFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+R+++ FN+P++V GGGGYT  
Sbjct: 260 KVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHI 358


>gi|115476000|ref|NP_001061596.1| Os08g0344100 [Oryza sativa Japonica Group]
 gi|38637022|dbj|BAD03280.1| putative histone deacetylase [Oryza sativa Japonica Group]
 gi|113623565|dbj|BAF23510.1| Os08g0344100 [Oryza sativa Japonica Group]
 gi|215767222|dbj|BAG99450.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218200995|gb|EEC83422.1| hypothetical protein OsI_28889 [Oryza sativa Indica Group]
          Length = 458

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/339 (58%), Positives = 257/339 (75%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP+ A   ++ +F
Sbjct: 21  RRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMT SFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDD +F  LF+ II 
Sbjct: 201 FTTNRVMTCSFHKYGD-FFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+R+++ FN+P++V GGGGYT  
Sbjct: 260 KVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHI 358


>gi|196008889|ref|XP_002114310.1| hypothetical protein TRIADDRAFT_64072 [Trichoplax adhaerens]
 gi|190583329|gb|EDV23400.1| hypothetical protein TRIADDRAFT_64072 [Trichoplax adhaerens]
          Length = 565

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/342 (59%), Positives = 254/342 (74%), Gaps = 29/342 (8%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           +  K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+LVL+Y L++KMEI+          
Sbjct: 4   LERKRKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLVLNYGLYRKMEIF---------- 53

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
               S  + E L                K N+GEDCPVF+ L+EFCQ+  GG+I AA ++
Sbjct: 54  ----SNKHCECLD--------------IKVNVGEDCPVFDGLYEFCQLSGGGSIAAAVKV 95

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVE
Sbjct: 96  NKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVE 155

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DG+DD  + ++F  
Sbjct: 156 EAFYTTDRVMTVSFHKYGE-YFPGTGDIRDIGASKGKYYAVNFPLRDGVDDECYDQIFSP 214

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +ISKV+E Y P  IVLQCGADSLAGDRLGCFNLS+ GH+ CV F+KKFNLP+++ GGGGY
Sbjct: 215 VISKVMEMYQPSVIVLQCGADSLAGDRLGCFNLSLKGHSACVEFMKKFNLPIVLLGGGGY 274

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ET   L  E+PNE+P N+Y +YF P+  L I
Sbjct: 275 TIRNVARCWAQETSAALGVEIPNELPYNDYFEYFGPDFKLNI 316


>gi|219128670|ref|XP_002184530.1| histone deacetylase 1 isoform [Phaeodactylum tricornutum CCAP
           1055/1]
 gi|217403980|gb|EEC43929.1| histone deacetylase 1 isoform [Phaeodactylum tricornutum CCAP
           1055/1]
          Length = 426

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/346 (58%), Positives = 258/346 (74%), Gaps = 5/346 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K ++SYFY       Y+GP+HPMKPHRL + HHL+L+Y L+K+M+ YRPH A   E+
Sbjct: 1   MTGKSRVSYFYHPTCPLFYYGPSHPMKPHRLKLAHHLILTYGLYKEMDCYRPHPAAAGEM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
            QFHS DYV F+ ++TPD    +   + ++N G+  DCPVF+ LFEF Q+Y G ++D A 
Sbjct: 61  TQFHSEDYVNFMSKVTPDNLRQYSASMQRFNAGDSTDCPVFDGLFEFTQLYTGSSLDGAL 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +L     DIAINW+GGLHHAKK EASGFCYIND+VL ILELLK HARVLY+DIDVHHGDG
Sbjct: 121 QLCQGNTDIAINWSGGLHHAKKGEASGFCYINDIVLAILELLKVHARVLYVDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGI-DDTSFTRL 237
           VEEAFY TDRVMT S HK+GD FFPGTG + + G ++G  +++N PL  GI D+T F  L
Sbjct: 181 VEEAFYTTDRVMTFSIHKYGD-FFPGTGHISDTGAKDGTGFSVNAPLNSGITDETYFHDL 239

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           FK ++ K+++ + PGA+VLQCGADSL GDRLGCFNL++ GHA CV +VK F +P LV GG
Sbjct: 240 FKPVMEKIMQVFNPGAVVLQCGADSLTGDRLGCFNLTLKGHAACVEYVKSFGVPTLVLGG 299

Query: 298 GGYTKENVARCWTVETGILLD-TELPNEIPENEYIKYFAPECSLRI 342
           GGYT  NVARCW  ET +LLD  ++PNEIP N+Y +Y+AP+  L +
Sbjct: 300 GGYTIRNVARCWAYETAVLLDKKDIPNEIPYNDYYEYYAPDYELHL 345


>gi|397600922|gb|EJK57763.1| hypothetical protein THAOC_22160 [Thalassiosira oceanica]
          Length = 406

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 195/318 (61%), Positives = 253/318 (79%), Gaps = 1/318 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+LV++Y L+KKM+++RP    P  + +FHS DY+ FL  ITPD  + + +
Sbjct: 1   MKPHRVRMTHNLVVNYGLYKKMDVFRPRLINPTAMTRFHSDDYINFLKVITPDNMNDYTR 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           +L ++N+GEDCPVF+ +FEFCQ+Y  G+I  A RLN+   DI +NW+GGLHHAKK EASG
Sbjct: 61  QLQRFNVGEDCPVFDGMFEFCQMYTSGSIGGAARLNDDDADIVVNWSGGLHHAKKAEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCYIND VL ILELLK H RVLYIDID+HHGDGVEEAFY T+RVMTVSFHKFG+ +FPGT
Sbjct: 121 FCYINDCVLAILELLKKHERVLYIDIDIHHGDGVEEAFYSTNRVMTVSFHKFGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GDV +IG  +GK ++IN PL DG+DD S+  +FK +ISK++E ++PGA+VLQCGADSL+G
Sbjct: 180 GDVLDIGYAQGKNFSINFPLNDGMDDASYHSVFKPVISKIMEHFSPGAVVLQCGADSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLS+ GH ECV FV+ FN+P+LV GGGGYT  NV RCWT ET +++   + +++
Sbjct: 240 DRLGCFNLSVKGHGECVNFVRSFNIPMLVLGGGGYTLRNVPRCWTYETSVVVGEPVKDDM 299

Query: 326 PENEYIKYFAPECSLRIP 343
           P N+Y +YF P+ SL +P
Sbjct: 300 PFNDYYEYFGPDYSLHLP 317


>gi|390604222|gb|EIN13613.1| histone deacetylase complex catalytic component RPD3 [Punctularia
           strigosozonata HHB-11173 SS5]
          Length = 522

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 262/339 (77%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ QF
Sbjct: 20  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQF 79

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL RITP   + + +E  KYN+G+DCPVF+ +F++C I AGG+++ A RL+  
Sbjct: 80  HTDEYIDFLGRITPSNMNAYIKEQHKYNVGDDCPVFDGMFDYCSISAGGSMEGAARLSRD 139

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH+RVLYIDIDVHHGDGVEEAF
Sbjct: 140 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHSRVLYIDIDVHHGDGVEEAF 199

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHK+G+ FFPGTGD+++IG  +GK YA+N PL+DGI D S+  +F+ +I 
Sbjct: 200 YTTDRVMTCSFHKYGE-FFPGTGDIRDIGIGKGKHYALNFPLRDGITDESYKSVFEPVIR 258

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+E+Y P AIVLQCG DSL+GD+LGCFNLS+ GHA CV+FVK FN PLL+ GGGGYT  
Sbjct: 259 QVMESYDPAAIVLQCGTDSLSGDKLGCFNLSMRGHANCVKFVKSFNKPLLLLGGGGYTMR 318

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R W  ETG+    EL   IP NEY  YF P   L +
Sbjct: 319 NVSRAWAFETGLAAGVELGPNIPVNEYYDYFGPTYELDV 357


>gi|406701744|gb|EKD04856.1| hypothetical protein A1Q2_00802 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 622

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/347 (59%), Positives = 273/347 (78%), Gaps = 6/347 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E++Q
Sbjct: 12  SKKRVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKQMEIFRAKPATKREMSQ 71

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FLHRITPD +  F +E  KYN+G+DCP+F+ LFE+C I AGG+++ A RL+ 
Sbjct: 72  FHTDEYVDFLHRITPDNEAQFAKEQVKYNVGDDCPIFDGLFEYCSISAGGSMEGAARLSR 131

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYIN----DLVLGILELLKYHARVLYIDIDVHHGDG 178
             CDIA+NWAGGLHHAKK EASGFCY+N    D+VLGILELL+YH RVLY+DIDVHHGDG
Sbjct: 132 DKCDIAVNWAGGLHHAKKAEASGFCYVNELTSDIVLGILELLRYHQRVLYVDIDVHHGDG 191

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY TDRVMT SFHK+G+ FFPGTGDV++ G  +GK YA+NVPL+DG+ D ++  +F
Sbjct: 192 VEEAFYTTDRVMTCSFHKYGE-FFPGTGDVRDTGIGKGKGYAVNVPLRDGMSDANYASIF 250

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + +I++++E Y PGAIVLQCG+DSL+GDRLG FNLS+ GHA CV+F+K F LPLL+ GGG
Sbjct: 251 QPVITRIIEWYKPGAIVLQCGSDSLSGDRLGSFNLSMRGHAACVQFIKGFGLPLLMLGGG 310

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           GYT ++V+R W  ETG+    EL + IP NEY +Y+ P+  L + PN
Sbjct: 311 GYTVKSVSRTWAYETGLAAGVELGSSIPNNEYYEYYGPDYELDVKPN 357


>gi|427793339|gb|JAA62121.1| Putative histone deacetylase complex catalytic component rpd3,
           partial [Rhipicephalus pulchellus]
          Length = 548

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/368 (55%), Positives = 265/368 (72%), Gaps = 38/368 (10%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL
Sbjct: 1   GDIGNYYYGQGHPMKPHRMRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFL 60

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWA
Sbjct: 61  RSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQATDIAVNWA 120

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYID+D+HHGDGVEEAFY TDRVMT 
Sbjct: 121 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDVDIHHGDGVEEAFYTTDRVMTC 180

Query: 193 SFHKFGDLF--------------------------------------FPGTGDVKEIGER 214
           SFHK+G+ F                                      FPGTGD+++IG  
Sbjct: 181 SFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYXXXXEYFPGTGDLRDIGAG 240

Query: 215 EGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 274
           +GK+YA+N PL+DGIDD S+  +F+ +ISKV+E Y P A+VLQCGADSL+GDRLGCFNL+
Sbjct: 241 KGKYYAVNFPLRDGIDDESYESIFQPLISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLT 300

Query: 275 IDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYF 334
           + GH +C  FV+++NLPLL  GGGGYT  NVARCWT ET + L  E+ NE+P N+Y +YF
Sbjct: 301 LKGHGKCAEFVRRYNLPLLQLGGGGYTIRNVARCWTYETAVALGVEIANELPYNDYFEYF 360

Query: 335 APECSLRI 342
            P+  L I
Sbjct: 361 GPDFKLHI 368


>gi|388854022|emb|CCF52366.1| probable histone deacetylase [Ustilago hordei]
          Length = 675

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/340 (61%), Positives = 267/340 (78%), Gaps = 2/340 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E++QFH+
Sbjct: 45  RVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMSQFHT 104

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YVEFL+R+TPD    F +E  K+N+G+DCPVF+ LFE+C I AGG+++ A RL+   C
Sbjct: 105 DEYVEFLNRVTPDNVDSFVREQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRDKC 164

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+YH RVLYIDIDVHHGDGVEEAFY 
Sbjct: 165 DIAINWAGGLHHAKKGEASGFCYINDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYT 224

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ FFPGTG++++IG  +GK Y+ N PL+DGI D S+  +F+ +IS++
Sbjct: 225 TDRVMTCSFHKYGE-FFPGTGELRDIGIGKGKMYSCNFPLRDGITDESYKTVFEPVISQI 283

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG+DSLAGD+LGCFNLS+ GHA CV FVK F LPLL+ GGGGYT  NV
Sbjct: 284 MQHYRPSAVVLQCGSDSLAGDKLGCFNLSMRGHANCVEFVKSFGLPLLLLGGGGYTMRNV 343

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           +R W  ETG+    EL  +IP NEY +YF P+  L + PN
Sbjct: 344 SRAWAFETGLAAGQELNPQIPVNEYYEYFGPDYRLDVRPN 383


>gi|402469008|gb|EJW04077.1| hypothetical protein EDEG_01653 [Edhazardia aedis USNM 41457]
          Length = 423

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 190/346 (54%), Positives = 267/346 (77%), Gaps = 1/346 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           +S  +I+YFYD ++ + ++   HPMKP R+ M H L+  Y+L+K M ++ PH A    L 
Sbjct: 8   KSMKRIAYFYDPNIATYHYAQGHPMKPLRVRMAHSLITQYNLYKHMTVHNPHHASFENLT 67

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            FHS DY++FL  +TP   +    +L K+N+GEDCPVF+ LF++C+   GGT+ +A ++N
Sbjct: 68  NFHSTDYIKFLSSVTPFNMNNMLSDLQKFNVGEDCPVFQGLFDYCKSTTGGTLASAYKIN 127

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   D+AINW+GGLHHAK+ EASGFCY+ND+V+GILELLKYH+RVLYIDIDVHHGDGVEE
Sbjct: 128 SMQVDVAINWSGGLHHAKRSEASGFCYVNDIVIGILELLKYHSRVLYIDIDVHHGDGVEE 187

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRV TVSFHK+GD +FPGTG + +IGE +G+ Y++NVPLKDGI+D S++ +FK +
Sbjct: 188 AFYTTDRVFTVSFHKYGD-YFPGTGSINDIGELKGRGYSVNVPLKDGINDLSYSYIFKPV 246

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  V++T+ P  +VLQCGADSL+GDRLGCFNLS  GHAECV+FV+ FN+P++V GGGGYT
Sbjct: 247 IQNVIDTFKPNVVVLQCGADSLSGDRLGCFNLSHKGHAECVKFVQSFNIPMIVLGGGGYT 306

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            +NV+R W  ET  +L  E+ +++P NE+ ++FAP+ ++ + + ++
Sbjct: 307 VKNVSRTWAYETSCILGVEIDDDLPYNEFYEHFAPDYTIEVKSNNM 352


>gi|357145870|ref|XP_003573796.1| PREDICTED: histone deacetylase 6-like [Brachypodium distachyon]
          Length = 457

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 259/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP  A   ++++F
Sbjct: 21  RRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPFPASEADISRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSEEYVSFLASATGNPNILDPRAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMTVSFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDD++F  LF+ I+ 
Sbjct: 201 FTTNRVMTVSFHKYGD-FFPGTGHITDVGAGEGKHYAVNVPLSDGIDDSTFRDLFQCIMK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+E Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+R+++ FN+P++V GGGGYT  
Sbjct: 260 RVMEVYQPEVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNVPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHI 358


>gi|326507482|dbj|BAK03134.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 458

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/339 (58%), Positives = 258/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP  A   ++++F
Sbjct: 21  RRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLVIHYGLHRLLELSRPFPASEADISRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSDEYVSFLASATGNPTILDPRAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLYIDIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYIDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMTVSFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDD +F  LF+ II 
Sbjct: 201 FTTNRVMTVSFHKYGD-FFPGTGHITDVGAGEGKHYAVNVPLSDGIDDDTFRDLFQCIIK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V++ Y P  +VLQCGADSLAGDRLGCFNLS+ GHA+C+RF++ FN+P++V GGGGYT  
Sbjct: 260 RVMDVYQPEVVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHI 358


>gi|389751602|gb|EIM92675.1| histone deacetylase complex catalytic component RPD3 [Stereum
           hirsutum FP-91666 SS1]
          Length = 547

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/340 (59%), Positives = 264/340 (77%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D DVG  ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E+ Q
Sbjct: 12  SKKRVCYFFDSDVGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMTQ 71

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +YV+FL +ITP   + F +E  K N+G+DCPVF+ LF++C I AGG+++ A RL+ 
Sbjct: 72  FHSDEYVDFLSKITPSNMNAFVKEQHKCNVGDDCPVFDGLFDYCSISAGGSMEGAARLSR 131

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 132 DKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHPRVLYIDIDVHHGDGVEEA 191

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ +FPGTG+++++G  +GK+YA+N PL+DGI+D ++  +F+ +I
Sbjct: 192 FYTTDRVMTASFHKYGE-YFPGTGELRDVGIGKGKYYALNFPLRDGINDANYKSVFEPVI 250

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+++Y P AIVLQCG DSLAGD+LGC NLS+ GHA CV+FVK FN PLL+ GGGGYT 
Sbjct: 251 QEVMQSYQPSAIVLQCGTDSLAGDKLGCLNLSMRGHANCVKFVKSFNKPLLLLGGGGYTM 310

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+R W  ETG+    EL   IP NEY +YF P+  L +
Sbjct: 311 RNVSRAWAYETGLATGVELGPTIPTNEYYEYFGPDHQLDV 350


>gi|341882523|gb|EGT38458.1| CBN-HDA-3 protein [Caenorhabditis brenneri]
          Length = 461

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 192/340 (56%), Positives = 261/340 (76%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YDGD G+ Y+G  HPMKPHR+ MTH L+++Y L++K+ + RP  A   E+ +
Sbjct: 8   SKSRVAYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPAPASFNEITR 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY+ FL  +  D    F   + ++++GEDCPVF+ ++EFCQ+  GG++ AA  LN 
Sbjct: 68  YHSDDYINFLRNVRSDNISSFTDHMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAANLNR 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  +IAINW GGLHHAKK EASGFCY ND+VL ILELLK H RVLYIDIDVHHGDGVEEA
Sbjct: 128 KESEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKQHKRVLYIDIDVHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK G+ +FPGTGD+K++G   GK+YA+NVPL+DG+DD ++ R+F+ ++
Sbjct: 188 FYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGSGKYYALNVPLRDGVDDLTYERIFRAVM 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +V+  + P A+VLQCGADSLAGDRLG FNL+ +GH +CV ++K FN+PLL+ GGGGYT 
Sbjct: 247 GEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTNGHGKCVEYMKSFNVPLLMVGGGGYTI 306

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCW  ET I L+ ++ +++P N+Y +YF P+  L I
Sbjct: 307 RNVSRCWLYETSIALNLDVSDDLPINDYFEYFMPDYKLHI 346


>gi|52548252|gb|AAU82113.1| histone deacetylase [Triticum aestivum]
          Length = 458

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 199/339 (58%), Positives = 258/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + ++SYFY+  +G  Y+G  HPMKPHR+ M H LV+ Y LH+ +E+ RP  A   ++++F
Sbjct: 21  RRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLVIHYGLHRLLELSRPFPASEADISRF 80

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV FL   T +   L  + + ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN  
Sbjct: 81  HSDEYVSFLASATGNPTILDPRAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRG 140

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NWAGGLHHAKK EASGFCY+ND+VL ILELLK+H RVLY+DIDVHHGDGVEEAF
Sbjct: 141 DADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAF 200

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           + T+RVMTVSFHK+GD FFPGTG + ++G  EGK YA+NVPL DGIDD +F  LF+ II 
Sbjct: 201 FTTNRVMTVSFHKYGD-FFPGTGHITDVGAGEGKHYAVNVPLSDGIDDDTFRDLFQCIIK 259

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V+E Y P  +VLQCGADSLAG+RLGCFNLS+ GHA+C+RF++ FN+P++V GGGGYT  
Sbjct: 260 RVMEVYQPEVVVLQCGADSLAGNRLGCFNLSVKGHADCLRFLRSFNIPMMVLGGGGYTIR 319

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET + +  E  N++P N+Y +YF P+ +L I
Sbjct: 320 NVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHI 358


>gi|358060890|dbj|GAA93406.1| hypothetical protein E5Q_00047 [Mixia osmundae IAM 14324]
          Length = 720

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/371 (56%), Positives = 278/371 (74%), Gaps = 5/371 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK  +SYF+  DVG  +FG  HPMKPHRL +T+HLV+ Y LH+KM +Y+P  A   EL  
Sbjct: 108 SKKAVSYFFPKDVGEYHFGERHPMKPHRLTLTNHLVMGYGLHQKMGVYQPRIADKAELQT 167

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH  DY++FL RITPD    F   L+++N+G+DCP+F+++F++C+ YAG ++ AARRL  
Sbjct: 168 FHDQDYIDFLSRITPDNAKEFGNTLSRFNIGDDCPIFDSMFDYCRQYAGASLSAARRLAA 227

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+ HARVLYIDID+HHGDGV+EA
Sbjct: 228 GTTDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRVHARVLYIDIDIHHGDGVQEA 287

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RV+T+SFHK+ + FFPGTG + E+G + GK++++NVPL+DGID+ S+  LFK+I+
Sbjct: 288 FYNSNRVLTMSFHKYSEHFFPGTGHMDELGSQLGKYFSLNVPLQDGIDNESYVALFKSIM 347

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              + T+ P  IVLQCGADSL  DRLGCFNLSI  H ECVRF+K FNLPLLV GGGGYT 
Sbjct: 348 EPTIATFQPSVIVLQCGADSLGCDRLGCFNLSIAAHGECVRFIKAFNLPLLVLGGGGYTI 407

Query: 303 ENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLRIP-NGHI--VCSFKEIDKF 357
           +NV+RCWT ET +LLD   ++ N +P   Y  +FAP+  L  P +G I  + + K++D+ 
Sbjct: 408 KNVSRCWTYETSVLLDAHNDISNVLPMTAYDDFFAPDFKLHPPLSGKIENLNTRKQLDQI 467

Query: 358 ILFNKQILYFI 368
            +   + L F+
Sbjct: 468 RVGLLERLRFM 478


>gi|388582081|gb|EIM22387.1| histone deacetylase [Wallemia sebi CBS 633.66]
          Length = 448

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/342 (60%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ QFH+
Sbjct: 12  RVCYFHDTDIGHYHYGPGHPMKPTRVKMCHSLVMNYGLYKKMEIFRAKPATRKEMTQFHT 71

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL+RI+PD    + +E  K+N+G+DCPVF+ LFE+C I AGG+++ A RL+    
Sbjct: 72  DEYVDFLNRISPDNMDSYAKEQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRNKT 131

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+YH RVLYIDID+HHGDGVEEAFY 
Sbjct: 132 DIAINWAGGLHHAKKAEASGFCYINDIVLGILELLRYHDRVLYIDIDIHHGDGVEEAFYT 191

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHKFG+ +FPGTGD+++IG  +G+ Y++NVPL+DGI D ++  +F+ +I KV
Sbjct: 192 TDRVMTVSFHKFGE-YFPGTGDLRDIGFGKGRKYSLNVPLRDGITDDNYKSIFEPVIGKV 250

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           VE Y P AIVLQCG+DSL+GD+LGCFNLS+ GHA CV FVK+FNLPLL+ GGGGYT  NV
Sbjct: 251 VEWYKPSAIVLQCGSDSLSGDKLGCFNLSMRGHANCVSFVKQFNLPLLMLGGGGYTIRNV 310

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           +R W  ETG+    EL   +P  EYI YF P   L +P+ ++
Sbjct: 311 SRAWAYETGLAAGQELSPTLPTTEYIDYFGPSYKLDVPSSNM 352


>gi|359491241|ref|XP_002281317.2| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 452

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/341 (59%), Positives = 260/341 (76%), Gaps = 15/341 (4%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YFY+  +G  Y+G  HPMKPHR+ M H+LV+ Y LH++MEI RP  A P ++ +F
Sbjct: 18  KRRVCYFYEPTIGDYYYGQGHPMKPHRIRMAHNLVVHYALHRRMEINRPFPAGPDDIRRF 77

Query: 64  HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           HS DYV+FL  +TPD+   H   + L ++N+GEDCPVF+ LF FCQ  AGG+I AA +LN
Sbjct: 78  HSDDYVDFLASVTPDSLHDHAHSRYLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 137

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
            +  DIA+NWAGGLHHAKK EASGFCY+ND+VLGILELLK H RVLY+DID+HHGDGVEE
Sbjct: 138 RRDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDIHHGDGVEE 197

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AF+ TDRVMTVSFHKFGD FFPGTG +++IG   GK+YA+NVPL DG+DD          
Sbjct: 198 AFFTTDRVMTVSFHKFGD-FFPGTGHIRDIGVGPGKYYALNVPLNDGMDD---------- 246

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
             +++  Y P A+VLQCGADSL+GDRLGCFNLS++GHA+C+RF++ FN+PL+V GGGGYT
Sbjct: 247 --EIMAVYQPDAVVLQCGADSLSGDRLGCFNLSVNGHADCLRFLRSFNVPLMVLGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NVARCW  ET + +  E  N++P NEY +YF P+ +L I
Sbjct: 305 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHI 345


>gi|154415587|ref|XP_001580818.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121915039|gb|EAY19832.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 425

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/347 (58%), Positives = 259/347 (74%), Gaps = 5/347 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +ISYFYD ++G+ Y+   HPMKP R+ MTH LVL+Y LH+ +EI+RP  A P E+ +
Sbjct: 2   SKHRISYFYDEEIGNFYYDEGHPMKPIRVRMTHELVLAYGLHEHLEIFRPRHATPQEMMK 61

Query: 63  FHSADYVEFLHRITP-DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY+ FL    P +       EL ++N+G+DCP+FEN+FE+CQI AGG+I AA+RLN
Sbjct: 62  FHSLDYINFLRTTNPHNVSSHPVSELKRFNIGDDCPIFENIFEYCQISAGGSICAAQRLN 121

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           + LC IAINWAGGLHHA K   SGFCYI D VLGI+ELLKYH RV+YIDID+HHGDGVEE
Sbjct: 122 SGLCHIAINWAGGLHHAAKDHPSGFCYIADCVLGIIELLKYHPRVMYIDIDIHHGDGVEE 181

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY +DRV+T SFHKF   FFPGTG + ++G   GK+YA+NVPL+DGI D+++ ++FK I
Sbjct: 182 AFYNSDRVLTCSFHKFSRDFFPGTGHIYDVGIDVGKYYAVNVPLQDGITDSAYEKIFKPI 241

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  ++E + PGAI+LQCGADSL GDRLG FNLS  GH ECV +VK F +PLLV GGGGYT
Sbjct: 242 IKHLIEWFRPGAILLQCGADSLVGDRLGFFNLSTKGHGECVSYVKSFGIPLLVCGGGGYT 301

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           KE+VARCW  ET +L   ++ N +PE +Y  +   +C    PN H+ 
Sbjct: 302 KESVARCWAYETSLLCGVDVGNNLPETDYSPFLVKQC----PNLHLT 344


>gi|392597105|gb|EIW86427.1| histone deacetylase complex catalytic component RPD3 [Coniophora
           puteana RWD-64-598 SS2]
          Length = 560

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/344 (58%), Positives = 264/344 (76%), Gaps = 1/344 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E+ QF
Sbjct: 14  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMTQF 73

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YV+FL RITP   + + +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+  
Sbjct: 74  HSDEYVDFLSRITPSNMNSYIKEQHKYNVGDDCPVFDGLFDYCSISAGGSMEGAARLSRD 133

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 134 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHTRVLYIDIDVHHGDGVEEAF 193

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ FFPGTG+++++G  +GK Y++N PL+DGI D S+  +F+ +I 
Sbjct: 194 YTTDRVMTVSFHKYGE-FFPGTGELRDVGIGKGKGYSLNFPLRDGITDESYKSIFEPVIQ 252

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +V++ + P AIVLQCG DSL+GD++GC NLS+ GH  CV+FVK FN PLL+ GGGGYT  
Sbjct: 253 QVMDNFDPSAIVLQCGTDSLSGDKIGCLNLSMRGHGNCVKFVKSFNKPLLLLGGGGYTMR 312

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NV+R W  ETG+    EL  EIP NEY +YF P   L + + ++
Sbjct: 313 NVSRAWAYETGLAAGVELGPEIPVNEYYEYFGPNYELDVKSSNM 356


>gi|71008408|ref|XP_758212.1| hypothetical protein UM02065.1 [Ustilago maydis 521]
 gi|46097952|gb|EAK83185.1| hypothetical protein UM02065.1 [Ustilago maydis 521]
          Length = 569

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/340 (60%), Positives = 267/340 (78%), Gaps = 2/340 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E++QFH+
Sbjct: 45  RVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMSQFHT 104

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YVEFL+R+TPD    F +E  K+N+G+DCPVF+ LFE+C I AGG+++ A RL+   C
Sbjct: 105 DEYVEFLNRVTPDNVDSFVREQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRDKC 164

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+YH RVLYIDIDVHHGDGVEEAFY 
Sbjct: 165 DIAINWAGGLHHAKKGEASGFCYINDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYT 224

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ FFPGTG++++IG  +GK Y+ N PL+DGI D S+  +F+ +IS++
Sbjct: 225 TDRVMTCSFHKYGE-FFPGTGELRDIGIGKGKMYSCNFPLRDGITDESYKSVFEPVISQI 283

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG+DSLAGD+LGCFNLS+ GHA CV +VK F LPLL+ GGGGYT  NV
Sbjct: 284 MQHYQPSAVVLQCGSDSLAGDKLGCFNLSMRGHANCVEYVKSFGLPLLLLGGGGYTMRNV 343

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           +R W  ETG+    EL  +IP NEY +YF P+  L + PN
Sbjct: 344 SRAWAFETGLAAGQELNAQIPVNEYYEYFGPDYRLDVRPN 383


>gi|449016856|dbj|BAM80258.1| histone deacetylase [Cyanidioschyzon merolae strain 10D]
          Length = 428

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 197/337 (58%), Positives = 258/337 (76%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++YFYD DVG+ Y+   HPMKPHR+ M H L+++Y +H+K+++ +P +A   +L +FHS
Sbjct: 21  RVAYFYDHDVGNYYYALGHPMKPHRMRMVHELLIAYGVHEKLQVLQPPRATERDLTRFHS 80

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+EFL RITP+T      +L ++ L ED P F++++ FCQI AGG++  A RLN   C
Sbjct: 81  DEYIEFLRRITPETAQKQLDQLQRFGLFEDSPCFDDIYRFCQISAGGSLAGAARLNRGFC 140

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+AINW+GGLHHAKK EASGFCY+ND VL ILELLK+HARVLY DIDVHHGDGVEEAFY 
Sbjct: 141 DVAINWSGGLHHAKKSEASGFCYVNDCVLAILELLKHHARVLYCDIDVHHGDGVEEAFYT 200

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           T+RVMT SFHKFG+ FFPGTGDV++IG   G+ YA+N PL+DGIDD  +  +F  I+S+V
Sbjct: 201 TNRVMTCSFHKFGN-FFPGTGDVRDIGYGPGRHYALNFPLQDGIDDVCYREIFAPIMSRV 259

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCGADSL+GDRLGCFNLS+DGHA+CVRF +++ + L++ GGGGYT  NV
Sbjct: 260 MEWYQPTAVVLQCGADSLSGDRLGCFNLSLDGHAQCVRFFQRYGVQLMLLGGGGYTIRNV 319

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           ARCW  ET +     L + IP N Y +Y+ P+  LRI
Sbjct: 320 ARCWAYETALAAGVVLDDMIPYNPYYEYYGPDFRLRI 356


>gi|384249468|gb|EIE22949.1| histone deacetylase 3 [Coccomyxa subellipsoidea C-169]
          Length = 462

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 195/346 (56%), Positives = 256/346 (73%), Gaps = 8/346 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD D+G+ Y+GPNHPMKPHR+ +T++L+L Y L+  +E Y+P KA   ++  FHS
Sbjct: 2   QVSYFYDPDIGTFYYGPNHPMKPHRITLTNNLILHYGLYNMLESYKPRKATGEDMVDFHS 61

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+ FL  +TP  +  + +++  +N+GEDCPVF   F FCQ+YAGG+I  A +LN  L 
Sbjct: 62  EEYINFLQSVTPQNKDQYAKQMQMFNVGEDCPVFSGQFRFCQLYAGGSIGGAVKLNYGLS 121

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+ INWAGGLHHAKK EASGFCY+ND+VL ILELLKY+ARVLYIDID+HHGDGVEEAF  
Sbjct: 122 DVVINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYNARVLYIDIDIHHGDGVEEAFMM 181

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TD+VMTVSFHK+G  FFPGTGD+  +G  +GK ++INVPLKDG+ DT++  LFK ++ +V
Sbjct: 182 TDKVMTVSFHKYGGGFFPGTGDLGSVGRGQGKHHSINVPLKDGMTDTAYEMLFKPVMRRV 241

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNL--------SIDGHAECVRFVKKFNLPLLVTGG 297
           V+ Y P  IV Q GADSLAGD+LG FNL        ++ GHAEC +++  F LP+LV GG
Sbjct: 242 VDVYQPEVIVFQSGADSLAGDKLGAFNLLLTLLLRHALQGHAECQQYMMSFGLPMLVLGG 301

Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           GGY   +VARCW  ETG +L  EL +E+PEN++   F P   L +P
Sbjct: 302 GGYNIASVARCWAYETGRILGVELEDELPENDHQSLFQPGAKLHLP 347


>gi|440494401|gb|ELQ76782.1| Histone deacetylase complex, catalytic component RPD3
           [Trachipleistophora hominis]
          Length = 416

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 194/339 (57%), Positives = 261/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K++I+YFYD ++G+ ++   HPMKPHR+ MTH L+++Y L+K M++++P  A    L  F
Sbjct: 2   KNRIAYFYDSNIGNYHYSEGHPMKPHRVRMTHSLLVNYSLYKHMDVFKPTMASFENLTNF 61

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY+ FL  ++        ++L K+N+G+DCP+F  L+++C+  AG ++ A  +LN +
Sbjct: 62  HSIDYINFLQSVSQSNMDDMIKDLQKFNVGDDCPIFRGLYDYCRSTAGSSLCATYKLNTR 121

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAK+ EASGFCY+ND+VLGILELLKY+ RV+YIDID HHGDGVEEAF
Sbjct: 122 EADIAINWSGGLHHAKRGEASGFCYVNDIVLGILELLKYNERVMYIDIDCHHGDGVEEAF 181

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG +K+ G   G+ YA+NVPLKDGIDD S+  +F+ I+S
Sbjct: 182 YTTDRVMTVSFHKYGE-YFPGTGALKDTGLLRGRNYAVNVPLKDGIDDFSYQSIFRPIVS 240

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           + VE + P AIVLQCGADSLAGDRLGCFNL+  GHAECVR+VK   +PLLV GGGGYT +
Sbjct: 241 RAVEMFRPCAIVLQCGADSLAGDRLGCFNLTNKGHAECVRYVKNLQIPLLVLGGGGYTIK 300

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R WT ET I+ D ++P E+P NEY+++F PE  + +
Sbjct: 301 NVSRTWTYETAIICDVQIPEELPYNEYMEHFGPEYKIHV 339


>gi|356518948|ref|XP_003528137.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6-like [Glycine
           max]
          Length = 462

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/343 (58%), Positives = 262/343 (76%), Gaps = 6/343 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFY+  +G  ++G  HPMKPHR  M H+L++ Y LH++M++ RP  A   ++ +F
Sbjct: 24  KRRMTYFYEPCIGYYFYGQGHPMKPHRFRMAHNLIVHYGLHRRMQVNRPFPAAEADIGRF 83

Query: 64  HSADYVEFLHRITPD----TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           HS DYV+FL  ++P       H   ++L ++N+GEDCPVF+ LF+FC+ + GG+I AA R
Sbjct: 84  HSDDYVDFLSTVSPQILSQNSHSHYRQLKRFNVGEDCPVFDGLFDFCRAFPGGSIGAAVR 143

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN    DIAINWAGGLHHAKK EASGFCY+ND+VLGILELLK H  VLYIDIDVHHGDGV
Sbjct: 144 LNRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHT-VLYIDIDVHHGDGV 202

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMTVSFHKF D FFPGTG  K+IG   GK Y++NVPL DG+DD +F  LF+
Sbjct: 203 EEAFYTTDRVMTVSFHKFRD-FFPGTGHSKDIGVGAGKNYSLNVPLNDGLDDETFCGLFR 261

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            II KV++ Y P A+VLQCGADSL+GD+LGCFNL++ GHA+C+RF++ F++PL+V GGGG
Sbjct: 262 PIIQKVMDIYQPDAVVLQCGADSLSGDQLGCFNLTVKGHADCLRFLRSFSVPLMVLGGGG 321

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           YT +NVARCWT ET + +  E   ++P NEY +YF P+ +L I
Sbjct: 322 YTVQNVARCWTYETAVAVGVEPSPKLPYNEYYEYFGPDYNLHI 364


>gi|20257590|gb|AAM15960.1|AF495526_1 histone deacetylase Hda1 [Ustilago maydis]
          Length = 569

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/340 (60%), Positives = 267/340 (78%), Gaps = 2/340 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E++QFH+
Sbjct: 45  RVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMSQFHT 104

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YVEFL+R+TPD    F +E  K+N+G+DCPVF+ LFE+C I AGG+++ A +L+   C
Sbjct: 105 DEYVEFLNRVTPDNVDSFVREQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAAKLSRDKC 164

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+YH RVLYIDIDVHHGDGVEEAFY 
Sbjct: 165 DIAINWAGGLHHAKKGEASGFCYINDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYT 224

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ FFPGTG++++IG  +GK Y+ N PL+DGI D S+  +F+ +IS++
Sbjct: 225 TDRVMTCSFHKYGE-FFPGTGELRDIGIGKGKMYSCNFPLRDGITDESYKSVFEPVISQI 283

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG+DSLAGD+LGCFNLS+ GHA CV +VK F LPLL+ GGGGYT  NV
Sbjct: 284 MQHYQPSAVVLQCGSDSLAGDKLGCFNLSMRGHANCVEYVKSFGLPLLLLGGGGYTMRNV 343

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           +R W  ETG+    EL  +IP NEY +YF P+  L + PN
Sbjct: 344 SRAWAFETGLAAGQELNAQIPVNEYYEYFGPDYRLDVRPN 383


>gi|308505626|ref|XP_003114996.1| CRE-HDA-3 protein [Caenorhabditis remanei]
 gi|308259178|gb|EFP03131.1| CRE-HDA-3 protein [Caenorhabditis remanei]
          Length = 483

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 194/357 (54%), Positives = 264/357 (73%), Gaps = 18/357 (5%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIY------------ 50
           SK ++SY+YDGD G+ Y+G  HPMKPHR+ MTH L+++Y L++ + +             
Sbjct: 8   SKQRVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRALNVMVRQEKRRTAVFL 67

Query: 51  -----RPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEF 105
                RP +A   E+ ++HS DY+ FL ++  D       ++T++++GEDCPVF+ ++EF
Sbjct: 68  TQKFQRPARASFYEMTRYHSDDYINFLRQVKSDNISTLTDQMTRFSVGEDCPVFDGMYEF 127

Query: 106 CQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHAR 165
           CQ+  GG++ AA +LN +  DIAINW GGLHHAKK EASGFCY ND+VL ILELLK H R
Sbjct: 128 CQLSCGGSLAAAAQLNRKESDIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKVHKR 187

Query: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPL 225
           VLYIDIDVHHGDGVEEAFY TDRVMTVSFHK G+ +FPGTGD+K++G   GK+YA+NVPL
Sbjct: 188 VLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGHGKYYALNVPL 246

Query: 226 KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV 285
           +DG+DD ++ R+F+T++ +V+  + P A+VLQCGADSLAGDRLG FNL+  GH +CV ++
Sbjct: 247 RDGVDDFTYERIFQTVMGEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYM 306

Query: 286 KKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           K FN+PLL+ GGGGYT  NV+RCW  ET I L+ ++ +++P N+Y +YF P+  L I
Sbjct: 307 KSFNVPLLLVGGGGYTIRNVSRCWVYETSIALNLDVADDLPVNDYFEYFIPDYKLHI 363


>gi|154418530|ref|XP_001582283.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121916517|gb|EAY21297.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 417

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/334 (60%), Positives = 247/334 (73%), Gaps = 1/334 (0%)

Query: 9   YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
           YFYD D+G  Y+ PNH MKPHR+ M H L+ +Y L KKM   RP +A   ++ +FHSADY
Sbjct: 7   YFYDDDIGKFYYAPNHAMKPHRVRMAHTLITAYGLDKKMRCLRPKRATANDMMRFHSADY 66

Query: 69  VEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA 128
           + FL R+ P+          K+NL  D P+FE +FEFCQI AGGT+ AA  L     DIA
Sbjct: 67  ISFLERVQPENIDQLNGLAEKFNLNTDTPIFEGVFEFCQISAGGTLSAAEELIKGKADIA 126

Query: 129 INWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDR 188
           INWAGGLHHAK  +ASGFCY+ D VLGIL+LL+ + RV+YIDIDVHHGDGVEEAFY TDR
Sbjct: 127 INWAGGLHHAKMTQASGFCYVADCVLGILKLLERYKRVMYIDIDVHHGDGVEEAFYTTDR 186

Query: 189 VMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVET 248
           V+TVSFHK+G  +FPG+G+  ++G   GK+Y+INVPLKDGIDD ++T LFK II+   E 
Sbjct: 187 VLTVSFHKYGH-YFPGSGNSNDVGAGRGKYYSINVPLKDGIDDNTYTMLFKNIITTAFEW 245

Query: 249 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARC 308
           Y P AI+LQCGADSL GDRLG FNL+I GHAEC+R  K F +PLL+TGGGGYT  NVARC
Sbjct: 246 YRPEAILLQCGADSLTGDRLGTFNLTISGHAECIRICKSFGVPLLLTGGGGYTVRNVARC 305

Query: 309 WTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           WT ET ++L  EL N+IP N+Y+ YF P+ +L I
Sbjct: 306 WTYETALVLGEELENQIPYNQYLPYFGPDYNLHI 339


>gi|85112564|ref|XP_964367.1| histone deacetylase RPD3 [Neurospora crassa OR74A]
 gi|28926146|gb|EAA35131.1| histone deacetylase RPD3 [Neurospora crassa OR74A]
          Length = 646

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 196/344 (56%), Positives = 259/344 (75%), Gaps = 13/344 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y+++K +E+Y            F
Sbjct: 25  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYNVYKFLEVY------------F 72

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 73  HTDEYIEFLQKVTPDNMDGFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRD 132

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 133 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYIDIDVHHGDGVEEAF 192

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDDT+++ +F+ +IS
Sbjct: 193 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGSGKNYAVNFPLRDGIDDTTYSSIFQPVIS 251

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ + P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +V+ F LP LV GGGGYT  
Sbjct: 252 AVMQYFQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVRSFGLPTLVLGGGGYTMR 311

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVAR W  ETG L+  E+   +P NEY  Y+ P+  L + + ++
Sbjct: 312 NVARTWAYETGRLVGVEMNPVLPYNEYYDYYGPDYELDVRSSNM 355


>gi|336463811|gb|EGO52051.1| histone deacetylase RPD3 [Neurospora tetrasperma FGSC 2508]
 gi|350295883|gb|EGZ76860.1| histone deacetylase RPD3 [Neurospora tetrasperma FGSC 2509]
          Length = 644

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 196/344 (56%), Positives = 259/344 (75%), Gaps = 13/344 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +++YFYD D+G+  +   HPMKPHR+ + H LV++Y+++K +E+Y            F
Sbjct: 25  KKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMNYNVYKFLEVY------------F 72

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y+EFL ++TPD    F +E  KYN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 73  HTDEYIEFLQKVTPDNMDGFMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRD 132

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 133 KCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYIDIDVHHGDGVEEAF 192

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK YA+N PL+DGIDDT+++ +F+ +IS
Sbjct: 193 YTTDRVMTVSFHKYGE-YFPGTGELRDIGIGSGKNYAVNFPLRDGIDDTTYSSIFQPVIS 251

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            V++ + P A+VLQCG DSL+GDRLGCFNLS+ GHA CV +V+ F LP LV GGGGYT  
Sbjct: 252 AVMQYFQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVNYVRSFGLPTLVLGGGGYTMR 311

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           NVAR W  ETG L+  E+   +P NEY  Y+ P+  L + + ++
Sbjct: 312 NVARTWAYETGRLVGVEMNPVLPYNEYYDYYGPDYELDVRSSNM 355


>gi|336374362|gb|EGO02699.1| hypothetical protein SERLA73DRAFT_176038 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336387256|gb|EGO28401.1| hypothetical protein SERLADRAFT_458766 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 537

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/339 (59%), Positives = 261/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++ YF+D D+G  ++GP HPMKP R+ M H LV++Y L+KKMEI+R   A   E+ QF
Sbjct: 14  KKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMTQF 73

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +YVEFL RITP   + + +E  KYN+G+DCPVF+ LF++C I AGG+++ A RL+  
Sbjct: 74  HSDEYVEFLSRITPSNMNSYIKEQHKYNVGDDCPVFDGLFDYCSISAGGSMEGAARLSRD 133

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLY+DIDVHHGDGVEEAF
Sbjct: 134 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHTRVLYVDIDVHHGDGVEEAF 193

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG  +GK YA+N P +DG+ D ++  +F+ II 
Sbjct: 194 YATDRVMTVSFHKYGE-YFPGTGELRDIGIGKGKHYALNFPFRDGVSDENYKNVFEPIIG 252

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +VV++Y P  IVLQ G DSL+GD+LGC NLS+ GHA CV+F+K FN PLL+ GGGGYT  
Sbjct: 253 QVVDSYRPSVIVLQSGTDSLSGDKLGCLNLSMRGHANCVKFIKSFNKPLLLLGGGGYTMR 312

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R W  ETG++   EL   IP NEY +YF P+  L +
Sbjct: 313 NVSRAWAYETGLVTGVELDPRIPINEYYEYFGPDYELDV 351


>gi|429965616|gb|ELA47613.1| hypothetical protein VCUG_00936 [Vavraia culicis 'floridensis']
          Length = 416

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/339 (57%), Positives = 258/339 (76%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K++I+YFYD ++G+ ++   HPMKPHR+ MTH L+++Y L+K M +Y+P  A    L  F
Sbjct: 2   KNRIAYFYDSNIGNYHYSEGHPMKPHRVRMTHSLLVNYSLYKHMNVYKPTMASFENLTNF 61

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY+ FL  ++        ++L K+N+G+DCP+F  L+++C+  AG ++ A  +LN +
Sbjct: 62  HSIDYINFLQSVSQSNMDDMIKDLQKFNVGDDCPIFRGLYDYCRSTAGSSLCATYKLNTR 121

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAK+ EASGFCY+ND+VLGILELLKY+ RV+YIDID HHGDGVEEAF
Sbjct: 122 EADIAINWSGGLHHAKRGEASGFCYVNDIVLGILELLKYNERVMYIDIDCHHGDGVEEAF 181

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG +K+ G   GK YAINVPL+DGIDD S+  +F  I+S
Sbjct: 182 YTTDRVMTVSFHKYGE-YFPGTGALKDTGLLRGKNYAINVPLRDGIDDFSYQSIFGPIVS 240

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           + VE + P AIVLQCGADSLAGDRLGCFNL+  GHAECVR+VK   +PLLV GGGGYT +
Sbjct: 241 RAVEMFRPSAIVLQCGADSLAGDRLGCFNLTSKGHAECVRYVKNLQIPLLVLGGGGYTIK 300

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NV+R WT ET I+ D ++  ++P NEY+++F PE  + +
Sbjct: 301 NVSRTWTYETAIICDVQIAEDLPYNEYMEHFGPEYKIHV 339


>gi|443894857|dbj|GAC72204.1| histone deacetylase complex, catalytic component RPD3 [Pseudozyma
           antarctica T-34]
          Length = 556

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/340 (60%), Positives = 266/340 (78%), Gaps = 2/340 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E++QFH+
Sbjct: 45  RVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMSQFHT 104

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YV+FL+R+TPD    F +E  K+N+G+DCPVF+ LFE+C I AGG+++ A RL+   C
Sbjct: 105 DEYVDFLNRVTPDNVDSFVREQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRDKC 164

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+YH RVLYIDIDVHHGDGVEEAFY 
Sbjct: 165 DIAINWAGGLHHAKKGEASGFCYINDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYT 224

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ FFPGTG++++ G  +GK Y+ N PL+DGI D S+  +F+ +I+++
Sbjct: 225 TDRVMTCSFHKYGE-FFPGTGELRDTGIGKGKMYSCNFPLRDGITDESYKTVFEPVIAQI 283

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P A+VLQCG+DSLAGD+LGCFNLS+ GHA CV +VK F LPLL+ GGGGYT  NV
Sbjct: 284 MEHYRPSAVVLQCGSDSLAGDKLGCFNLSMRGHANCVEYVKSFGLPLLLLGGGGYTMRNV 343

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           +R W  ETG+    EL  +IP NEY +YF P+  L + PN
Sbjct: 344 SRAWAFETGLAAGQELNPQIPVNEYYEYFGPDYRLDVRPN 383


>gi|148698240|gb|EDL30187.1| mCG12239 [Mus musculus]
          Length = 428

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 189/298 (63%), Positives = 242/298 (81%), Gaps = 1/298 (0%)

Query: 51  RPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYA 110
           RPHKA   E+ ++HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  
Sbjct: 1   RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLST 60

Query: 111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYID 170
           GG++ +A +LN Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYID
Sbjct: 61  GGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYID 120

Query: 171 IDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGID 230
           ID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGID
Sbjct: 121 IDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGID 179

Query: 231 DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNL 290
           D S+  +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNL
Sbjct: 180 DESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNL 239

Query: 291 PLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           P+L+ GGGGYT  NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 240 PMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMT 297


>gi|392573879|gb|EIW67017.1| hypothetical protein TREMEDRAFT_72293 [Tremella mesenterica DSM
           1558]
          Length = 581

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/340 (59%), Positives = 267/340 (78%), Gaps = 5/340 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YF+D D+G+ ++G  HPMKP R+ M H LV++Y L+KKMEI+R   A   E++Q
Sbjct: 9   SKKRVCYFFDSDIGNYHYGSGHPMKPTRIRMCHSLVMNYGLYKKMEIFRAKPATKREMSQ 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FLHRITP+  H F +E +KYN+G+DCP+F+ LFE+C I AGG+++ A RL+ 
Sbjct: 69  FHTDEYVDFLHRITPENAHQFSKEQSKYNVGDDCPIFDGLFEYCSISAGGSMEGAARLSR 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEA
Sbjct: 129 DKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ FFPGTG+V++ G  +GK YA+NVPL+DGI D ++  +F+ ++
Sbjct: 189 FYTTDRVMTASFHKYGE-FFPGTGEVRDNGIGKGKGYAVNVPLRDGITDENYRSIFQPVM 247

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +++++ Y PGAIVLQCGADSL+GDRLG FNLS+ GHA CV+F+K FNLPLL+ GGGGYT 
Sbjct: 248 TRIIDFYQPGAIVLQCGADSLSGDRLGSFNLSMRGHAACVQFIKSFNLPLLLLGGGGYTV 307

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           ++V+R W  ETG+    EL       + + Y+ P+  L +
Sbjct: 308 KSVSRTWAYETGLAAGVELRG----GKLLLYYGPDYQLDV 343


>gi|452824795|gb|EME31795.1| histone deacetylase 1/2 [Galdieria sulphuraria]
          Length = 475

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 196/339 (57%), Positives = 254/339 (74%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SY+YD DVG+ Y+   HPMKPHR+ MTH L+ +Y + K M + RP +A   ++ +F
Sbjct: 6   KRRVSYYYDPDVGNYYYSQGHPMKPHRMRMTHALIAAYGMFKHMAVQRPPRASEKDITRF 65

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS  Y+ FL   +P+        + K+N+ EDCPVF+ L+EFCQI AGG++ AA  LN+ 
Sbjct: 66  HSDSYINFLKSASPEKVWDMNSSIRKFNVCEDCPVFDGLWEFCQISAGGSLAAASELNSG 125

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAK  EASGFCY+ND VLGILELLK H RVLY DID+HHGDGVEEAF
Sbjct: 126 RADIAINWSGGLHHAKMSEASGFCYVNDCVLGILELLKCHTRVLYADIDIHHGDGVEEAF 185

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT SFHKFGD +FPGTGD+ +IG   GK+Y++N+PL DG+DD S   +F  +++
Sbjct: 186 YTTDRVMTCSFHKFGD-YFPGTGDIGDIGYGPGKYYSLNIPLYDGMDDESHREIFDAVMT 244

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E Y PGA+VLQ GADSL+GDRLGCFNL+I GH+ C+ F KK+N+P+L+ GGGGYT  
Sbjct: 245 KVMEWYQPGAVVLQGGADSLSGDRLGCFNLTIAGHSHCIDFFKKYNVPILMLGGGGYTIR 304

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVARCW  ET   L+ E+  +IP NEY++Y+ PE  ++I
Sbjct: 305 NVARCWAYETSRALNLEIQEDIPYNEYLEYYGPEFRIQI 343


>gi|303388791|ref|XP_003072629.1| histone deacetylase 1 [Encephalitozoon intestinalis ATCC 50506]
 gi|303301770|gb|ADM11269.1| histone deacetylase 1 [Encephalitozoon intestinalis ATCC 50506]
          Length = 414

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/346 (56%), Positives = 263/346 (76%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++ YFYD ++G+  +   HPMKP R+ MTH L++ Y+L+K M+I RP +A    L  
Sbjct: 2   SSKRVVYFYDPEIGNFSYAMGHPMKPLRVKMTHTLLVGYELYKYMDILRPFQASYENLTN 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  ++ +      ++L K+N+ +DCPVF  L+++C++ AGG+I AA+++++
Sbjct: 62  FHSVDYINFLSSVSSENMEEMIKDLHKFNIRDDCPVFPGLYDYCKLTAGGSIYAAQKISS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              D+AINWAGGLHHAK+ EASGFCY+ND+VLGILELLKY+ RVLYIDIDVHHGDGVEEA
Sbjct: 122 GKYDVAINWAGGLHHAKRSEASGFCYVNDIVLGILELLKYNKRVLYIDIDVHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+GD +FPGTG V +IG  +G+ Y++NVPLKDGIDD S+  +FK ++
Sbjct: 182 FYTTDRVMTVSFHKYGD-YFPGTGMVSDIGLAKGRGYSVNVPLKDGIDDESYFSIFKPVV 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E Y P AIVLQ GADSL+GD+LGCFNLS  GH+ C++FV+ FN+PL++ GGGGYT 
Sbjct: 241 SKVIEVYRPNAIVLQSGADSLSGDKLGCFNLSHLGHSRCIKFVQSFNIPLILLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
            NV++ W   T ++LD ++P EIP NEY  Y+AP   + +P  +I 
Sbjct: 301 GNVSKAWAYGTSVVLDVDIPKEIPYNEYFDYYAPTYKIDVPTSNIA 346


>gi|213407988|ref|XP_002174765.1| histone deacetylase phd1 [Schizosaccharomyces japonicus yFS275]
 gi|212002812|gb|EEB08472.1| histone deacetylase phd1 [Schizosaccharomyces japonicus yFS275]
          Length = 423

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/339 (57%), Positives = 253/339 (74%), Gaps = 1/339 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++Y +D  VG+ ++G  HPMKPHRL +T+HL++ Y LH +M++Y P KA   E+A+
Sbjct: 13  QKKRVTYHHDSAVGNYHYGDKHPMKPHRLTITNHLIMGYGLHHEMDVYCPRKATFKEMAE 72

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+EFL R+TP     +   L K+N+G+DCPVF  ++EF Q  AG ++DA+RRL  
Sbjct: 73  FHSEDYLEFLQRVTPQNVDEYSDVLQKFNIGDDCPVFNGIYEFSQRSAGASLDASRRLLQ 132

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAK+ EASGFCY+ND+VL IL LL+Y+ RVLYIDID+HHGDGV+EA
Sbjct: 133 GQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILSLLRYYPRVLYIDIDIHHGDGVQEA 192

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY +DRVMT+SFHK+   FFP TG   EIG+ +GK +A+N+PL DGIDD S+T LFK+I+
Sbjct: 193 FYESDRVMTLSFHKYNGTFFPATGKFDEIGKNKGKHFALNIPLDDGIDDVSYTSLFKSIV 252

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              + T+ P AIVLQCGADSL  DRLG FNLS+  H ECVRF K FN+P+LV GGGGYT 
Sbjct: 253 EPTINTFQPSAIVLQCGADSLGYDRLGVFNLSVKAHGECVRFTKSFNIPMLVIGGGGYTV 312

Query: 303 ENVARCWTVETGILLDTELPNEIPE-NEYIKYFAPECSL 340
           +NVA  W  ET I +D  +PNE+P    Y ++FAP+ +L
Sbjct: 313 KNVALAWCYETSICVDASIPNELPAFTPYFEFFAPDYTL 351


>gi|402221041|gb|EJU01111.1| histone deacetylase [Dacryopinax sp. DJM-731 SS1]
          Length = 453

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/341 (58%), Positives = 263/341 (77%), Gaps = 2/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ ++ YF+D D+G  ++GP+HPMKP R+ M H LV++Y L+K+MEI+R   A   E+ Q
Sbjct: 9   TRKRVCYFFDADIGGFHYGPSHPMKPTRIKMCHALVMNYGLYKRMEIFRAKPATKREMTQ 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FH+ DY+EFL + +P T H F +E  KY +G +DCP+F+ LF++C I +GG+++ A RL+
Sbjct: 69  FHTDDYIEFLGKASPSTAHQFVKEQGKYQVGVDDCPIFDGLFDYCSISSGGSMEGAARLS 128

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIAINWAGGLHHAKK EASGFCY+ND+VLG+LE+L+++ RVLYIDID HHGDGVEE
Sbjct: 129 RDKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGVLEMLRHYERVLYIDIDCHHGDGVEE 188

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY T+RVMTVSFHK+G+ +FPGTGD +++G  +GK YA+N PL+DGI D S+  +F+ I
Sbjct: 189 AFYTTERVMTVSFHKYGE-YFPGTGDFRDVGVGKGKGYALNFPLRDGITDQSYRSVFEPI 247

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I+ V+E Y P AIVLQCG DSLAGD+LGC NLS+ GHA CV FVKKFNLPLL+ GGGGYT
Sbjct: 248 ITAVMEQYQPQAIVLQCGTDSLAGDKLGCLNLSMRGHANCVAFVKKFNLPLLLLGGGGYT 307

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             NV+RCW  ETG+    EL  +IP NEY  YF P+  L +
Sbjct: 308 MRNVSRCWAYETGLATGVELGEDIPMNEYYNYFGPDYKLDV 348


>gi|398412986|ref|XP_003857811.1| histone deacetylase, partial [Zymoseptoria tritici IPO323]
 gi|339477696|gb|EGP92787.1| histone deacetylase [Zymoseptoria tritici IPO323]
          Length = 508

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/317 (61%), Positives = 247/317 (77%), Gaps = 1/317 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ M H L+++Y L+KK+EIYR   A   E+ QFH+ +YV+FL R+TPD    F +
Sbjct: 1   MKPHRIRMAHSLIMNYGLYKKLEIYRAKPASKYEMTQFHTDEYVDFLQRVTPDNMDGFVK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           E  +YN+G+DCPVF+ LFEFC I AGG+++ A RLN   CD+A+NWAGGLHHAKK EASG
Sbjct: 61  EQGRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRGKCDVAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCYIND+VLGILELL++H RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYINDIVLGILELLRFHPRVLYIDIDVHHGDGVEEAFYSTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           G++++IG   GK Y++N PL+DGIDD S+  +F+  I  V+E Y P A+VLQCG DSL+G
Sbjct: 180 GELRDIGVGAGKNYSVNFPLRDGIDDKSYKGIFEPTIGWVMEYYKPTAVVLQCGGDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLS+ GHA CV FVK F LP L+ GGGGYT  NVAR W  ETG L+  E+ +++
Sbjct: 240 DRLGCFNLSMRGHANCVNFVKSFGLPTLILGGGGYTMRNVARTWAFETGQLVGVEMGSDL 299

Query: 326 PENEYIKYFAPECSLRI 342
           P  +Y +Y++P+  L +
Sbjct: 300 PFTDYYEYYSPDFELDV 316


>gi|297282850|ref|XP_001096929.2| PREDICTED: histone deacetylase 1-like [Macaca mulatta]
          Length = 518

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 189/292 (64%), Positives = 240/292 (82%), Gaps = 1/292 (0%)

Query: 51  RPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYA 110
           RPHKA   E+ ++HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  
Sbjct: 91  RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLST 150

Query: 111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYID 170
           GG++ +A +LN Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYID
Sbjct: 151 GGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYID 210

Query: 171 IDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGID 230
           ID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGID
Sbjct: 211 IDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGID 269

Query: 231 DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNL 290
           D S+  +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNL
Sbjct: 270 DESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNL 329

Query: 291 PLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           P+L+ GGGGYT  NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 330 PMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 381


>gi|262301885|gb|ACY43535.1| histone deacetylase [Metajapyx subterraneus]
          Length = 283

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 192/284 (67%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I+SKV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYELIFMPILSKVIETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+N+PLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNVPLLILGGGGYTIRNVAR 283


>gi|410927322|ref|XP_003977098.1| PREDICTED: histone deacetylase 3-like [Takifugu rubripes]
          Length = 409

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/367 (55%), Positives = 262/367 (71%), Gaps = 25/367 (6%)

Query: 5   DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
           ++ SYFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P+KA   ++ +FH
Sbjct: 3   NRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62

Query: 65  SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           S DY+                           PVF  LFEFC  Y G ++  A +LN+++
Sbjct: 63  SEDYMXXXXXXX-------------------XPVFPGLFEFCSRYTGASLQGATQLNHKI 103

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
           CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 104 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 163

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 164 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 223

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT  N
Sbjct: 224 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRN 283

Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFI 358
           VARCWT ET +LL+  + +E+P +EY +YFAP+ +L      RI N +     ++I + +
Sbjct: 284 VARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 343

Query: 359 LFNKQIL 365
             N ++L
Sbjct: 344 FENLKML 350


>gi|401881702|gb|EJT45992.1| histone deacetylase 3 [Trichosporon asahii var. asahii CBS 2479]
 gi|406697767|gb|EKD01020.1| histone deacetylase 3 [Trichosporon asahii var. asahii CBS 8904]
          Length = 484

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/346 (59%), Positives = 260/346 (75%), Gaps = 1/346 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK  +SY++  DVG+ ++G  HPM+PHRL +T++LVL Y LH  M++Y P KA   EL +
Sbjct: 36  SKPTVSYYFPKDVGNYHYGERHPMRPHRLMLTNNLVLGYGLHNNMDMYNPRKATEDELRE 95

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH ADYVEFL R+TP       ++ T YN+G+DCP+F +LF FC+ YAGG++ A R+L+ 
Sbjct: 96  FHDADYVEFLKRVTPKNAQQLTKDYTMYNIGDDCPIFHDLFNFCKQYAGGSLAAGRKLSQ 155

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL+YH RVLYIDID+HHGDGV+EA
Sbjct: 156 GGTDIAINWSGGLHHAKKGEASGFCYVNDIVLAILELLRYHPRVLYIDIDIHHGDGVQEA 215

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RV+TVSFHK+   FFPGTG++ EIG   GK +AINVPL DGIDD S+  LFK+++
Sbjct: 216 FYLSNRVLTVSFHKYAVDFFPGTGNLSEIGSNLGKHFAINVPLLDGIDDESYISLFKSVM 275

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              + TY P AIVLQCGADSL  DRLG FNLSI  H ECVRF+K F LPLLV GGGGY +
Sbjct: 276 EPTITTYRPSAIVLQCGADSLGCDRLGTFNLSIAAHGECVRFIKTFGLPLLVLGGGGYRQ 335

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHI 347
            +V+RCW  ETG+    ELP E+P N Y ++F P+ SL  P +GHI
Sbjct: 336 SSVSRCWAYETGVCNGVELPKELPPNNYYEFFGPDYSLHPPLSGHI 381


>gi|378755068|gb|EHY65095.1| histone deacetylase 1 [Nematocida sp. 1 ERTm2]
          Length = 427

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 192/337 (56%), Positives = 251/337 (74%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           KISYFYD ++G+  + P HPMKPHR+ +TH L+++Y + K++ +Y P  A   +L +FHS
Sbjct: 3   KISYFYDQEIGNYKYAPGHPMKPHRIRLTHSLIMNYSVFKRLNVYSPMAASFEDLTRFHS 62

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+EFL  I  +      +EL++YN+ EDCPVFE ++E+CQ  AGG+I  A  +N  L 
Sbjct: 63  DDYIEFLQNIRKENADTKEKELSRYNMIEDCPVFEGVYEYCQKTAGGSIQGAAHINEGLS 122

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D++INW+GGLHHAK+ EASGFCY+ND+VLGILELL+YH RV+YIDIDVHHGDGVEEAFY 
Sbjct: 123 DVSINWSGGLHHAKRREASGFCYVNDIVLGILELLRYHERVMYIDIDVHHGDGVEEAFYC 182

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           +DRVMT+SFH  G+ FFPGTG V ++G  +G+ Y+IN+PL  GIDD ++  +FK ++   
Sbjct: 183 SDRVMTISFHMHGE-FFPGTGAVTDVGIEKGRGYSINIPLNSGIDDNTYLSIFKPVVGAA 241

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           VE Y P  IVLQCGADSLAGDRLGCFNL+  GHA CV FVK  N+PLLV GGGGYT  NV
Sbjct: 242 VEKYRPDVIVLQCGADSLAGDRLGCFNLTHKGHAGCVEFVKSLNIPLLVLGGGGYTISNV 301

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           +R W  ET IL + ++P+E+P  EY  ++ P  +L I
Sbjct: 302 SRVWAYETAILANVDVPSELPYTEYFDHYHPNYTLEI 338


>gi|343429032|emb|CBQ72606.1| Histone deacetylase [Sporisorium reilianum SRZ2]
          Length = 610

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/340 (60%), Positives = 263/340 (77%), Gaps = 2/340 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YF+D D+G+ ++GP HPMKP R+ M H LV++Y L+K+MEI+R   A   E++QFH+
Sbjct: 45  RVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIFRAKPATKREMSQFHT 104

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +YVEFL+R+TPD    F +E  K+N+G+DCPVF+ LFE+C I AGG+++ A RL+   C
Sbjct: 105 DEYVEFLNRVTPDNVDSFVREQAKFNVGDDCPVFDGLFEYCSISAGGSMEGAARLSRDKC 164

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+YH RVLYIDIDVHHGDGVEEAFY 
Sbjct: 165 DIAINWAGGLHHAKKGEASGFCYINDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYT 224

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ FFPGTG++++ G   GK Y+ N PL+DGI D S+  +F+ +I+ +
Sbjct: 225 TDRVMTCSFHKYGE-FFPGTGELRDTGIGAGKMYSCNFPLRDGITDESYKSVFEPVIAHI 283

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+VLQCG+DSLAGD+LGCFNLS+ GHA CV +VK F LPLL+ GGGGYT  NV
Sbjct: 284 MQHYQPSAVVLQCGSDSLAGDKLGCFNLSMRGHANCVEYVKSFGLPLLLLGGGGYTMRNV 343

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           +R W  ETG+    EL   IP NEY +YF P+  L + PN
Sbjct: 344 SRAWAFETGLAAGQELNPHIPVNEYYEYFGPDYRLDVRPN 383


>gi|449531394|ref|XP_004172671.1| PREDICTED: histone deacetylase 9-like, partial [Cucumis sativus]
          Length = 219

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/211 (95%), Positives = 207/211 (98%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKD+ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY+LHKKMEIYRPHKAYPVEL
Sbjct: 1   MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHSADYVEFLHRI PDTQHLF  EL+KYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
Sbjct: 61  AQFHSADYVEFLHRINPDTQHLFANELSKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH+RVLYIDIDVHHGDGVE
Sbjct: 121 NHQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHSRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEI 211
           EAFYFTDRVMTVSFHK+GDLFFPGTGDVK I
Sbjct: 181 EAFYFTDRVMTVSFHKYGDLFFPGTGDVKVI 211


>gi|300122684|emb|CBK23251.2| unnamed protein product [Blastocystis hominis]
          Length = 428

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/340 (58%), Positives = 259/340 (76%), Gaps = 1/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++Y+YD ++G+  +G +H  KPHR+ + HHL+L+YDL K+M++++P      ++ +
Sbjct: 23  QKRRVAYYYDTEIGNYSYGKHHCWKPHRVRIVHHLLLAYDLCKEMDMFKPALTDYKDIMR 82

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DYV FL  I PD     ++E  ++N+GED PVF+ LF++ + Y  G+I  A RLN 
Sbjct: 83  FHSDDYVNFLRTINPDNAASMQKEQIQFNVGEDSPVFDGLFDYIRSYCSGSIGGACRLNE 142

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            L D+ INW+GGLHHAKK EASGFCY+ND+VL ILELLK   RVLYIDID+HHGDGVEEA
Sbjct: 143 GLSDVVINWSGGLHHAKKSEASGFCYVNDIVLAILELLKKFTRVLYIDIDIHHGDGVEEA 202

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RVMTVSFHKFGD FFPGTGD+ +IG  EGK Y++N PL+ GIDD +F  +F+ +I
Sbjct: 203 FYTTNRVMTVSFHKFGD-FFPGTGDISDIGFGEGKGYSLNFPLRAGIDDANFVAIFEPVI 261

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+E Y P AIVLQCGADSL+GDRLGCFNLS+ GHA+CV+FV+ F LP LV GGGGYT 
Sbjct: 262 RGVMEHYQPEAIVLQCGADSLSGDRLGCFNLSLKGHAQCVKFVRSFGLPTLVLGGGGYTV 321

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NV+RCWT ET I+L  E+ NE+P  +Y++YF P+ SL+I
Sbjct: 322 RNVSRCWTYETAIVLGKEVKNELPFTDYLEYFGPDYSLQI 361


>gi|396081127|gb|AFN82746.1| histone deacetylase 1 [Encephalitozoon romaleae SJ-2008]
          Length = 415

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 191/342 (55%), Positives = 262/342 (76%), Gaps = 1/342 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YFYD ++G+  +   HPMKP R+ MTH L++ Y+L+K M++ RP +A    L  FH+
Sbjct: 5   RVVYFYDPEIGTFSYAMGHPMKPLRVKMTHTLLVGYELYKYMDVLRPFQASYENLTNFHA 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ++ +      ++L K+N+ +DCPVF  L+++C++ +GG+I AA+++N+   
Sbjct: 65  VDYINFLSSVSSENMEEMIKDLHKFNIRDDCPVFPGLYDYCKLTSGGSIYAAQKINSGKY 124

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+AINWAGGLHHAK+ EASGFCY+ND+VLGILELLKY+ RVLYIDIDVHHGDGVEEAFY 
Sbjct: 125 DVAINWAGGLHHAKRSEASGFCYVNDIVLGILELLKYNKRVLYIDIDVHHGDGVEEAFYT 184

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+GD +FPGTG V +IG  +GK Y++NVPL+DGIDD S+  +FK ++SKV
Sbjct: 185 TDRVMTVSFHKYGD-YFPGTGMVTDIGLAKGKGYSVNVPLRDGIDDESYFSIFKPVVSKV 243

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P AIVLQ GADSL+GD+LGCFNLS  GH+ C++FV+ FN+PL++ GGGGYT  NV
Sbjct: 244 IEVYRPDAIVLQSGADSLSGDKLGCFNLSHLGHSRCIKFVQSFNIPLILLGGGGYTIGNV 303

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           ++ W   T ++LD E+P EIP NEY  Y+AP   + +P  ++
Sbjct: 304 SKAWAYGTSVVLDVEIPREIPYNEYFDYYAPTYKIDVPTSNM 345


>gi|401825821|ref|XP_003887005.1| histone deacetylase [Encephalitozoon hellem ATCC 50504]
 gi|392998162|gb|AFM98024.1| histone deacetylase [Encephalitozoon hellem ATCC 50504]
          Length = 415

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 262/343 (76%), Gaps = 1/343 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YFYD ++G+  +   HPMKP R+ MTH L++ Y+L+K M++ RP +A    L  FHS
Sbjct: 5   RVVYFYDPEIGTFSYAMGHPMKPLRVKMTHTLLVGYELYKYMDVLRPFQASYENLTNFHS 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ++ +      ++L K+N+ +DCPVF  L+++C++ +GG+I AA+++N+   
Sbjct: 65  VDYINFLSSVSSENMEEMIKDLHKFNIRDDCPVFPGLYDYCRLTSGGSIYAAQKINSGKY 124

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+AINWAGGLHHAK+ EASGFCY+ND+VLGILELLKY+ RVLYIDIDVHHGDGVEEAFY 
Sbjct: 125 DVAINWAGGLHHAKRSEASGFCYVNDIVLGILELLKYNKRVLYIDIDVHHGDGVEEAFYT 184

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+GD +FPGTG V +IG  +GK Y++NVPLKDGIDD S+  +FK ++S+V
Sbjct: 185 TDRVMTVSFHKYGD-YFPGTGMVTDIGLAKGKGYSVNVPLKDGIDDESYFSIFKPVVSRV 243

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P AIVLQ GADSL+GD+LGCFNLS  GH+ C++FV+ FN+PL++ GGGGYT  NV
Sbjct: 244 IEVYRPDAIVLQSGADSLSGDKLGCFNLSHLGHSRCIKFVQSFNIPLILLGGGGYTIGNV 303

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ++ W   T ++LD ++P EIP NEY  Y+AP   + +P  ++ 
Sbjct: 304 SKAWAYGTSVVLDVDIPREIPYNEYFDYYAPTYKIDVPTSNMA 346


>gi|300708557|ref|XP_002996455.1| hypothetical protein NCER_100451 [Nosema ceranae BRL01]
 gi|239605759|gb|EEQ82784.1| hypothetical protein NCER_100451 [Nosema ceranae BRL01]
          Length = 417

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/355 (55%), Positives = 265/355 (74%), Gaps = 3/355 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            I YFYD ++G  ++   HPMKP R+ MTH L+++Y L++KM+I +P  A    L  FHS
Sbjct: 4   NIVYFYDPEIGIYHYATGHPMKPLRVRMTHSLIVNYGLYRKMDILKPFMASYKNLTNFHS 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  +T +       +LTK+N+ +DCPVF  L++FC++ AGGT+ AA+++N+   
Sbjct: 64  IDYINFLSSVTTENMQEITSDLTKFNVKDDCPVFSGLYDFCRLTAGGTMYAAQKINSGKY 123

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAK+ EASGFCY+ND+VLGILELLKY+ RVLYIDIDVHHGDGVEEAFY 
Sbjct: 124 DIAINWSGGLHHAKRNEASGFCYVNDIVLGILELLKYNKRVLYIDIDVHHGDGVEEAFYT 183

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK GD +FPGTG + +IG  +GK YA+NVPL++GIDD ++  LFK+II KV
Sbjct: 184 TDRVMTVSFHKHGD-YFPGTGSIDDIGLGKGKNYAVNVPLRNGIDDVTYIALFKSIIDKV 242

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A++LQCGADSLAGD+LGCFNLS  GH+ECV+ VK FN+PL++ GGGGYT  NV
Sbjct: 243 MDLYRPNAVILQCGADSLAGDKLGCFNLSHIGHSECVKHVKSFNIPLILLGGGGYTIGNV 302

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCSFKE--IDKFI 358
           +R W  +T  +L+ E+ +++P NE+ +YF P   + +P  ++        IDK I
Sbjct: 303 SRAWAYDTATVLNEEIDSDLPFNEFYEYFGPTYKIDVPTSNMTNKNTSDYIDKLI 357


>gi|156097514|ref|XP_001614790.1| histone deacetylase [Plasmodium vivax Sal-1]
 gi|148803664|gb|EDL45063.1| histone deacetylase, putative [Plasmodium vivax]
          Length = 448

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/346 (60%), Positives = 266/346 (76%), Gaps = 5/346 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M ++ K++YF+D D+GS Y+G  HPMKP R+ MTH L++SY+L+K ME+YRPHK+   EL
Sbjct: 1   MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FH  +YV+FL  I+ +    F  +L ++N+GE  DCPVF+ LF+F Q  AG +ID A 
Sbjct: 61  TLFHDYEYVDFLSSISMENYREFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAA 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LN+   DI +NW+GGLHHAK  EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDG
Sbjct: 121 KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY T RVMTVSFHKFGD +FPGTGD+ +IG   GK+Y++NVPL DGI D +F  LF
Sbjct: 181 VEEAFYVTHRVMTVSFHKFGD-YFPGTGDITDIGVHHGKYYSVNVPLNDGITDDAFVDLF 239

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I K V+TY PGAI+LQCGADSL GDRLG FNL+I GHA CV  V+ +NLPLLV GGG
Sbjct: 240 KVVIDKCVQTYKPGAIILQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNLPLLVLGGG 299

Query: 299 GYTKENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLRI 342
           GYT  NV+RCW  ETG++L+   E+P++I  N+Y  Y+AP+  L +
Sbjct: 300 GYTIRNVSRCWAYETGVVLNKHHEMPDQISLNDYYDYYAPDFQLHL 345


>gi|336366622|gb|EGN94968.1| hypothetical protein SERLA73DRAFT_95597 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 541

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/347 (57%), Positives = 262/347 (75%), Gaps = 3/347 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YDGDVGS  +G  HPMKPHR+ +TH LV +YD+  KM I RP +A P  +  
Sbjct: 2   SKRRVAYYYDGDVGSFTYGLGHPMKPHRIRITHDLVSAYDMLDKMHILRPKRASPEAMTS 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV FL+R+TP+T        T++ +GED P FE +F+FC I AGG+I AA+R+++
Sbjct: 62  FHTDEYVHFLNRVTPETAEQLTYHGTRFLMGEDNPAFEGVFDFCTISAGGSICAAQRISS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+ ++RVLYIDID HHGDGVEEA
Sbjct: 122 GAVDIAINWAGGLHHAKKREASGFCYINDIVLGILELLRTYSRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ +FPGTG   + G  +GK YA+NVPLKDG+ D +F  +F+ I+
Sbjct: 182 FYTTDRVMTCSFHKFGE-YFPGTGTQDDCGRGKGKGYAVNVPLKDGLTDEAFKSIFEPIV 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK ++ +AP  +VLQCGADSLAGD+LGCFN+++ GHA CV+F++K N+PL++ GGGGYT 
Sbjct: 241 SKCMQVFAPSVVVLQCGADSLAGDKLGCFNITMHGHAHCVQFLRKQNIPLILLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIPNGHI 347
           +NVAR WT ET   L  E  +  ++P NEY ++F P   L +P  ++
Sbjct: 301 KNVARVWTYETACALGIEDTIDEKLPWNEYFEWFGPRYRLEVPENNM 347


>gi|225710598|gb|ACO11145.1| Histone deacetylase 1 [Caligus rogercresseyi]
          Length = 322

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 189/292 (64%), Positives = 242/292 (82%), Gaps = 1/292 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ KI Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   SRKKICYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++ +A +LN 
Sbjct: 68  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVASAVKLNK 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 128 QAADIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+   F  II
Sbjct: 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDDSYQNTFVPII 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLV 294
           SKV+E+Y P AIVLQCGADSL+GDRLGC NL++ GHA+CV F+KK+NLPL++
Sbjct: 247 SKVMESYHPSAIVLQCGADSLSGDRLGCLNLTLKGHAKCVEFMKKYNLPLML 298


>gi|123439206|ref|XP_001310377.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121892144|gb|EAX97447.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 415

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 196/342 (57%), Positives = 250/342 (73%), Gaps = 1/342 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K ++ Y YD +VG   + P HPMKPHR+ M H+L+L+YDL   M + +P +A   ++
Sbjct: 1   MSGKKRVYYLYDDEVGDYLYSPTHPMKPHRIRMAHNLILAYDLFPHMHVLKPRRATATDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FH+ +Y++FL  I+P         + K+N+GED PVF  LFEFC I AGG+I+ A  L
Sbjct: 61  TRFHTDEYIQFLQMISPQNTKTLSGVMEKFNVGEDSPVFAGLFEFCSISAGGSINGAEIL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINWAGGLHHAKK EASGFCY+ D VLG+L+LL+ + RV+YIDID+HHGDGVE
Sbjct: 121 NDGKADIAINWAGGLHHAKKSEASGFCYVADCVLGLLKLLERYQRVMYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDR +TVSFHK+G+ +FPGTG V +IG   GK YAINVPL DGI D +F  LFK 
Sbjct: 181 EAFYTTDRCLTVSFHKYGE-YFPGTGAVTDIGIGRGKHYAINVPLHDGITDIAFDVLFKD 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I   +E Y P AI+LQCGADSL GDRLG FNL+I GH ECVR+VK F +PLLVTGGGGY
Sbjct: 240 VIGTAIEWYRPQAILLQCGADSLRGDRLGAFNLTIRGHGECVRYVKSFGIPLLVTGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T  NVARCW  ET +LLD E+ +++P N+Y+ Y+ P+  L +
Sbjct: 300 TVRNVARCWAYETAVLLDQEIDDDLPYNDYLGYYGPDYHLHL 341


>gi|262301909|gb|ACY43547.1| histone deacetylase [Nicoletia meinerti]
          Length = 283

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 238/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  DI INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASDICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F+ IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFQPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSR 283


>gi|347558872|gb|AEP04146.1| histone deacetylase 6 [Musa acuminata AAA Group]
          Length = 415

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/333 (60%), Positives = 252/333 (75%), Gaps = 17/333 (5%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR- 84
           +KPHR+ M H+LV+ Y LH+ ME+ RP  A   ++ +FHS DYV+FL  ++P T  L   
Sbjct: 1   IKPHRIRMAHNLVVHYALHRLMEVSRPFPASAADIRRFHSDDYVDFLASVSPATAALASA 60

Query: 85  ---------------QELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAI 129
                          ++L ++N+GEDCPVF+ LFEFCQ  AGG+I AA ++N    DIAI
Sbjct: 61  QAQPLSDPASASASSRQLKRFNVGEDCPVFDGLFEFCQASAGGSIGAAVKINRGDADIAI 120

Query: 130 NWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRV 189
           NWAGGLHHAKKCEASGFCY+ND+VLGILELLKYH RVLY+DID+HHGDGVEEAF+ TDRV
Sbjct: 121 NWAGGLHHAKKCEASGFCYVNDIVLGILELLKYHRRVLYVDIDIHHGDGVEEAFFTTDRV 180

Query: 190 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETY 249
           MTVSFHK+GD FFPGTG +K++G  +GK+YA+NVPL DG+DD SF  LF+ II KV+  Y
Sbjct: 181 MTVSFHKYGD-FFPGTGHIKDVGFGQGKYYALNVPLNDGMDDESFRGLFRPIIQKVMAVY 239

Query: 250 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCW 309
            P A+VLQCGADSLAGDRLGCFNLS+ GHA+C+R+++ FN+P+LV GGGGYT  NVARCW
Sbjct: 240 QPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNVPMLVLGGGGYTMRNVARCW 299

Query: 310 TVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
             ET + +  E  N++P NEY +YF P+  L I
Sbjct: 300 YYETAVAIGVEPDNQLPYNEYYEYFGPDYDLHI 332


>gi|262301845|gb|ACY43515.1| histone deacetylase [Ctenolepisma lineata]
 gi|262301903|gb|ACY43544.1| histone deacetylase [Machiloides banksi]
          Length = 283

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  DI INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASDICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFNPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSR 283


>gi|262301923|gb|ACY43554.1| histone deacetylase [Pedetontus saltator]
          Length = 283

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  DI INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASDICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFNPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSR 283


>gi|19173094|ref|NP_597645.1| HISTONE DEACETYLASE 1 [Encephalitozoon cuniculi GB-M1]
 gi|19168761|emb|CAD26280.1| HISTONE DEACETYLASE 1 [Encephalitozoon cuniculi GB-M1]
 gi|449330136|gb|AGE96399.1| histone deacetylase 1 [Encephalitozoon cuniculi]
          Length = 416

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 190/343 (55%), Positives = 261/343 (76%), Gaps = 1/343 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YFYD ++G   +   HPMKP R+ MTH L++ Y+L+K M++ RP +A    L  FH+
Sbjct: 5   RVVYFYDPEIGCFSYAMGHPMKPLRVKMTHTLLVGYELYKYMDVLRPFQASYENLTNFHA 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ++ +      ++L K+N+ +DCPVF  L+++C++ +GG+I AA+++N+   
Sbjct: 65  VDYINFLSSVSSENMEEMIKDLHKFNIRDDCPVFPGLYDYCRLTSGGSIYAAQKINSGKY 124

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+AINWAGGLHHAK+ EASGFCY+ND+VLGILELLKY+ R+LYIDID+HHGDGVEEAFY 
Sbjct: 125 DVAINWAGGLHHAKRGEASGFCYVNDIVLGILELLKYNKRILYIDIDIHHGDGVEEAFYT 184

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+GD +FPGTG V + G  +GK Y++NVPLKDGIDD S+  +FK I+SKV
Sbjct: 185 TDRVMTVSFHKYGD-YFPGTGMVTDTGLAKGKGYSVNVPLKDGIDDESYFSIFKPIVSKV 243

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +ETY P AIVLQ GADSL+GD+LGCFNLS  GH+ C++FV+ FN+PL++ GGGGYT  NV
Sbjct: 244 IETYQPNAIVLQSGADSLSGDKLGCFNLSHLGHSRCIKFVQSFNIPLILLGGGGYTIGNV 303

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           ++ W   T ++LD ++P EIP NEY  Y+AP   + +P  ++ 
Sbjct: 304 SKAWAYGTSVVLDVDIPREIPYNEYFDYYAPTYRIDVPTSNMA 346


>gi|123495267|ref|XP_001326705.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121909623|gb|EAY14482.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 394

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/352 (55%), Positives = 254/352 (72%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I YFYD D+G+  +   HPMKPHR+ M H+L+++Y+L   M + RP +A  +++ +F
Sbjct: 2   KKRIVYFYDDDIGNFMYNQGHPMKPHRIRMAHNLIMAYELFSSMRVLRPRRATALDMTRF 61

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +YV+FL   TP         L K+N+  D PVF  +FEFCQI AGG+I  A+ L + 
Sbjct: 62  HTDEYVQFLQVATPKNTSGDDPVLEKFNIDGDSPVFNGVFEFCQISAGGSISGAQELISG 121

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIAINWAGGLHHAKK EASGFCY  D VLGIL+LL  + RV+YIDID+HHGDGVEEAF
Sbjct: 122 KCDIAINWAGGLHHAKKAEASGFCYCADCVLGILKLLDRYDRVMYIDIDIHHGDGVEEAF 181

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRV+TVSFHK+GD FFP TG+  +IG   GK YA+NVPL DG+DD +F  +FK ++S
Sbjct: 182 YTTDRVLTVSFHKYGDDFFPCTGNKNDIGIDRGKGYAVNVPLSDGLDDAAFESIFKPVMS 241

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +++E Y PGAI+LQCGADSL GDR+GCFNL++ GHA  V F+K   +PLLVTGGGGYT  
Sbjct: 242 RLIEWYRPGAILLQCGADSLTGDRIGCFNLTLKGHAMAVEFIKNLKIPLLVTGGGGYTVR 301

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCSFKEID 355
           NVARCW  ET +L +T + +E+P NEY+ YF P+  L +   ++  +  E D
Sbjct: 302 NVARCWAYETAVLTETPISDELPYNEYMGYFGPDYRLHLQPSNMENTNSEQD 353


>gi|50548063|ref|XP_501501.1| YALI0C06061p [Yarrowia lipolytica]
 gi|49647368|emb|CAG81802.1| YALI0C06061p [Yarrowia lipolytica CLIB122]
          Length = 433

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 192/343 (55%), Positives = 256/343 (74%), Gaps = 2/343 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K ++SY ++ +    ++G  HPMKP RL +T HLVL Y LH K+++YR  +A   E+ +
Sbjct: 26  QKRRVSYHFNEEAARYHYGVRHPMKPFRLMLTDHLVLGYKLHNKLDLYRSRRATETEVRE 85

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL R+TPD    F++ L K+N+G+DCP+F+ ++++  IYAG ++DA+R+L  
Sbjct: 86  FHAEEYIDFLQRVTPDNIKKFQRVLPKFNIGDDCPIFDGMYDYSIIYAGSSLDASRKLLA 145

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VL IL LL+ + RVLYIDID+HHGDGV+EA
Sbjct: 146 GQSDIAINWSGGLHHAKKFEASGFCYVNDIVLAILNLLRMYPRVLYIDIDIHHGDGVQEA 205

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT+SFHK+   FFPGTG+  EIG   GK Y++NVPL+DGIDD S+ RLFK+++
Sbjct: 206 FYSTDRVMTLSFHKYNGEFFPGTGNFDEIGTSLGKNYSLNVPLRDGIDDESYVRLFKSVL 265

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+ +Y P AIVLQCGADSL GDRLGCFNL+I  H ECV + K F LPL+V GGGGYT 
Sbjct: 266 EPVLNSYRPSAIVLQCGADSLGGDRLGCFNLNIKAHGECVAYTKSFGLPLIVLGGGGYTP 325

Query: 303 ENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLRIPN 344
            NV+R W  ET + LD +L   +P +  ++KYFAP+ SL  PN
Sbjct: 326 RNVSRLWCYETSVCLDVDLETRLPSSMPFLKYFAPDYSLH-PN 367


>gi|353236836|emb|CCA68822.1| related to histone deacetylase [Piriformospora indica DSM 11827]
          Length = 511

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/317 (61%), Positives = 253/317 (79%), Gaps = 1/317 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKP R+ MTH LV++Y L+KKMEIYR   A   E+ QFHS DY+EFL ++TP+  +++++
Sbjct: 1   MKPTRVRMTHSLVMNYGLYKKMEIYRAKPATKREMTQFHSDDYIEFLSKVTPNNMNMYQK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           E  KY +G+DCP+F+ LF++C I AGG+++ A RL+   CDIAINWAGGLHHAKK EASG
Sbjct: 61  EQAKYTVGDDCPIFDGLFDYCAISAGGSMEGAARLSRDKCDIAINWAGGLHHAKKGEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAFY TDRV+TVSFHK+G+ FFPGT
Sbjct: 121 FCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEAFYTTDRVLTVSFHKYGE-FFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD++++G  +GK YA N PL++GI D ++ R+F+ +I++V+E+Y PGAIVLQCG DSL+G
Sbjct: 180 GDLRDMGSGKGKRYACNFPLREGITDENYKRIFEPVINQVMESYRPGAIVLQCGTDSLSG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           D+LGC NLS+ GHA C+RFVK FNLPLL+ GGGGYT  NV+R W  ETG+    EL  ++
Sbjct: 240 DKLGCLNLSMRGHANCIRFVKSFNLPLLLLGGGGYTMRNVSRAWAYETGLAAGYELGADL 299

Query: 326 PENEYIKYFAPECSLRI 342
           P NEY  YF P+  L +
Sbjct: 300 PVNEYYDYFGPDYKLDV 316


>gi|388583103|gb|EIM23406.1| hypothetical protein WALSEDRAFT_59594 [Wallemia sebi CBS 633.66]
          Length = 588

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 189/345 (54%), Positives = 251/345 (72%), Gaps = 2/345 (0%)

Query: 1   MRS--KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPV 58
           MRS  K ++SY+Y   VG  ++G  HPMKPHRL +T+ LVL Y +HK MEIY P +A   
Sbjct: 19  MRSHYKPRVSYYYSKGVGDYHYGEKHPMKPHRLALTNSLVLGYGMHKYMEIYEPQRATRE 78

Query: 59  ELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAAR 118
           E+ +FH  DY++FL R++          + ++N+ +DCP F NL++FCQ YAG ++  AR
Sbjct: 79  EICEFHDEDYIDFLSRLSSPPTPTMINLMKQFNMTDDCPAFPNLYDFCQQYAGASLLGAR 138

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
            + +Q  DIAINW GGLHHA K EASGFCY+ND+VL ILELL++H RVLYIDID+HHGDG
Sbjct: 139 HITSQRSDIAINWTGGLHHAHKAEASGFCYVNDIVLAILELLRFHPRVLYIDIDIHHGDG 198

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           V+EAFY ++RVMTVSFHK+   FFPGTG + E G+  GK +++NVPL+DGIDD S+  LF
Sbjct: 199 VQEAFYNSNRVMTVSFHKYTGDFFPGTGALSETGQGAGKHFSLNVPLQDGIDDYSYVALF 258

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K ++S  +E+Y P AI+LQCGADSL  DRLG FNLSI  H ECV+++K + +PL+V GGG
Sbjct: 259 KNVMSSTIESYRPSAILLQCGADSLGCDRLGAFNLSIKAHGECVQYIKSWGIPLMVVGGG 318

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+RCW  ET +LL+  + + +P+  Y +YFAP+  L  P
Sbjct: 319 GYTIRNVSRCWAYETSVLLNMGVNDTLPQTSYDEYFAPDYVLHPP 363


>gi|336379303|gb|EGO20458.1| hypothetical protein SERLADRAFT_452574 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 541

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/347 (57%), Positives = 261/347 (75%), Gaps = 3/347 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YDGDVG  + G  HPMKPHR+ +TH LV +YD+  KM I RP +A P  +  
Sbjct: 2   SKRRVAYYYDGDVGFSHMGLGHPMKPHRIRITHDLVSAYDMLDKMHILRPKRASPEAMTS 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV FL+R+TP+T        T++ +GED P FE +F+FC I AGG+I AA+R+++
Sbjct: 62  FHTDEYVHFLNRVTPETAEQLTYHGTRFLMGEDNPAFEGVFDFCTISAGGSICAAQRISS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+ ++RVLYIDID HHGDGVEEA
Sbjct: 122 GAVDIAINWAGGLHHAKKREASGFCYINDIVLGILELLRTYSRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ +FPGTG   + G  +GK YA+NVPLKDG+ D +F  +F+ I+
Sbjct: 182 FYTTDRVMTCSFHKFGE-YFPGTGTQDDCGRGKGKGYAVNVPLKDGLTDEAFKSIFEPIV 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK ++ +AP  +VLQCGADSLAGD+LGCFN+++ GHA CV+F++K N+PL++ GGGGYT 
Sbjct: 241 SKCMQVFAPSVVVLQCGADSLAGDKLGCFNITMHGHAHCVQFLRKQNIPLILLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIPNGHI 347
           +NVAR WT ET   L  E  +  ++P NEY ++F P   L +P  ++
Sbjct: 301 KNVARVWTYETACALGIEDTIDEKLPWNEYFEWFGPRYRLEVPENNM 347


>gi|358056605|dbj|GAA97574.1| hypothetical protein E5Q_04252 [Mixia osmundae IAM 14324]
          Length = 509

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/345 (58%), Positives = 265/345 (76%), Gaps = 1/345 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K +I+Y++D D+G+  +   HPMKPHR+ M H+L+++Y L KKM++ RP +A P  +  
Sbjct: 6   AKKRIAYYHDDDIGAYSYTYVHPMKPHRIRMAHNLIVNYGLDKKMDVLRPERASPHSMTA 65

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL  +T DT        T++ +GEDCP F+ LFEFC I AGG+I +ARRLN+
Sbjct: 66  FHTDEYINFLTTVTSDTLEELTGHGTRFLIGEDCPAFDGLFEFCSISAGGSISSARRLND 125

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++HARVLYIDID+HHGDGVEEA
Sbjct: 126 GQADIAINWAGGLHHAKKREASGFCYVNDIVLAILELLRFHARVLYIDIDIHHGDGVEEA 185

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFGD +FPGTG + + G  +GK YAINVPL+DGI+D S+  +FK II
Sbjct: 186 FYTTDRVMTCSFHKFGD-YFPGTGALGDQGIGKGKGYAINVPLRDGIEDESYHSMFKPII 244

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             +++ Y PGA++LQCGADSLA D+LGCFNLS+ GHAECV+F+K F++PL+V GGGGYT 
Sbjct: 245 QHLMDWYRPGAVILQCGADSLAEDKLGCFNLSMRGHAECVQFMKTFDVPLIVLGGGGYTI 304

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            NVAR W  ETGIL   ++  ++P N+YI+Y+ P   L +PN ++
Sbjct: 305 RNVARTWAYETGILAGVDMNEDLPFNDYIEYYGPAFKLDVPNNNM 349


>gi|357618085|gb|EHJ71179.1| histone deacetylase 3 [Danaus plexippus]
          Length = 389

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 185/294 (62%), Positives = 236/294 (80%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFC 106
           M++YRP++A   ++ +FHS DY+EFL  +TP     + ++L  YN+G+DCPVFE LF+FC
Sbjct: 1   MQVYRPYRASAHDMCRFHSEDYIEFLQNVTPQNIQTYSKDLLHYNVGDDCPVFEGLFDFC 60

Query: 107 QIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARV 166
            +Y G +++ A +LNN  CDIAINW+GGLHHAKK E SGFCY+ND+V+ +LELLKYH RV
Sbjct: 61  SMYTGASLEGAMKLNNNACDIAINWSGGLHHAKKFEPSGFCYVNDIVIAVLELLKYHPRV 120

Query: 167 LYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLK 226
           LYIDIDVHHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G+++++NVPLK
Sbjct: 121 LYIDIDVHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYFSVNVPLK 180

Query: 227 DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVK 286
           +GIDD S+ ++FK +IS V+E Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK
Sbjct: 181 EGIDDQSYVQIFKPVISNVMEFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVK 240

Query: 287 KFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             N+P LV GGGGYT  NVARCWT ET +L+D  + NE+P  EY+++FAP+  L
Sbjct: 241 NLNVPTLVVGGGGYTLRNVARCWTYETSLLVDENISNELPYTEYLEFFAPDFQL 294


>gi|68076263|ref|XP_680051.1| Histone deacetylase [Plasmodium berghei strain ANKA]
 gi|56500923|emb|CAH98271.1| Histone deacetylase, putative [Plasmodium berghei]
          Length = 447

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/353 (59%), Positives = 267/353 (75%), Gaps = 10/353 (2%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M ++ K++YF+D D+GS Y+G  HPMKP R+ MTH L++SY+L+K ME+YRPHK+   EL
Sbjct: 1   MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FH  +YV+FL  I+ +    F  +L ++N+GE  DCPVF+ LF+F Q  AG +ID A 
Sbjct: 61  TLFHDYEYVDFLSSISMENYRDFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAA 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LN+   DI +NW+GGLHHAK  EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDG
Sbjct: 121 KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY T RVMTVSFHKFGD +FPGTGD+ ++G   GK+Y++NVPL DGI D +F  LF
Sbjct: 181 VEEAFYVTHRVMTVSFHKFGD-YFPGTGDITDVGVNHGKYYSVNVPLNDGITDEAFVDLF 239

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I K V++Y PGAI+LQCGADSL GDRLG FNL+I GHA CV  V+ +NLPLLV GGG
Sbjct: 240 KVVIDKCVQSYKPGAIILQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNLPLLVLGGG 299

Query: 299 GYTKENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLR-----IPN 344
           GYT  NV+RCW  ETG++L+   E+ ++I  N+Y  Y+AP+  L      IPN
Sbjct: 300 GYTIRNVSRCWAYETGVVLNKHHEMSDQISLNDYYDYYAPDFQLHLQPSSIPN 352


>gi|82539406|ref|XP_724093.1| histone deacetylase [Plasmodium yoelii yoelii 17XNL]
 gi|23478622|gb|EAA15658.1| histone deacetylase [Plasmodium yoelii yoelii]
          Length = 447

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/353 (59%), Positives = 267/353 (75%), Gaps = 10/353 (2%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M ++ K++YF+D D+GS Y+G  HPMKP R+ MTH L++SY+L+K ME+YRPHK+   EL
Sbjct: 1   MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FH  +YV+FL  I+ +    F  +L ++N+GE  DCPVF+ LF+F Q  AG +ID A 
Sbjct: 61  TLFHDYEYVDFLSSISMENYRDFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAA 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LN+   DI +NW+GGLHHAK  EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDG
Sbjct: 121 KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY T RVMTVSFHKFGD +FPGTGD+ ++G   GK+Y++NVPL DGI D +F  LF
Sbjct: 181 VEEAFYVTHRVMTVSFHKFGD-YFPGTGDITDVGVNHGKYYSVNVPLNDGITDEAFVDLF 239

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I K V++Y PGAI+LQCGADSL GDRLG FNL+I GHA CV  V+ +NLPLLV GGG
Sbjct: 240 KVVIDKCVQSYKPGAIILQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNLPLLVLGGG 299

Query: 299 GYTKENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLR-----IPN 344
           GYT  NV+RCW  ETG++L+   E+ ++I  N+Y  Y+AP+  L      IPN
Sbjct: 300 GYTIRNVSRCWAYETGVVLNKHHEMSDQISLNDYYDYYAPDFQLHLQPSSIPN 352


>gi|70952251|ref|XP_745306.1| Histone deacetylase [Plasmodium chabaudi chabaudi]
 gi|56525588|emb|CAH87890.1| Histone deacetylase, putative [Plasmodium chabaudi chabaudi]
          Length = 447

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/353 (59%), Positives = 267/353 (75%), Gaps = 10/353 (2%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M ++ K++YF+D D+GS Y+G  HPMKP R+ MTH L++SY+L+K ME+YRPHK+   EL
Sbjct: 1   MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAAR 118
             FH  +Y++FL  I+ +    F  +L ++N+GE  DCPVF+ LF+F Q  AG +ID A 
Sbjct: 61  TLFHDYEYIDFLSSISMENYRDFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAA 120

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
           +LN+   DI +NW+GGLHHAK  EASGFCYIND+VLGILELLKYHARV+YIDIDVHHGDG
Sbjct: 121 KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG 180

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY T RVMTVSFHKFGD +FPGTGD+ ++G   GK+Y++NVPL DGI D +F  LF
Sbjct: 181 VEEAFYVTHRVMTVSFHKFGD-YFPGTGDITDVGVNHGKYYSVNVPLNDGITDEAFVDLF 239

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I K V++Y PGAI+LQCGADSL GDRLG FNL+I GHA CV  V+ +NLPLLV GGG
Sbjct: 240 KVVIDKCVQSYKPGAIILQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNLPLLVLGGG 299

Query: 299 GYTKENVARCWTVETGILLDT--ELPNEIPENEYIKYFAPECSLR-----IPN 344
           GYT  NV+RCW  ETG++L+   E+ ++I  N+Y  Y+AP+  L      IPN
Sbjct: 300 GYTIRNVSRCWAYETGVVLNKHHEMSDQISLNDYYDYYAPDFQLHLQPSSIPN 352


>gi|427793337|gb|JAA62120.1| Putative histone deacetylase complex catalytic component rpd3,
           partial [Rhipicephalus pulchellus]
          Length = 530

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/330 (59%), Positives = 253/330 (76%), Gaps = 14/330 (4%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL
Sbjct: 1   GDIGNYYYGQGHPMKPHRMRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFL 60

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWA
Sbjct: 61  RSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQATDIAVNWA 120

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYID+D+HHGDGVEEAFY TDRVMT 
Sbjct: 121 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDVDIHHGDGVEEAFYTTDRVMTC 180

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+                  
Sbjct: 181 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEXXXS------------- 226

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCGADSL+GDRLGCFNL++ GH +C  FV+++NLPLL  GGGGYT  NVARCWT E
Sbjct: 227 AVVLQCGADSLSGDRLGCFNLTLKGHGKCAEFVRRYNLPLLQLGGGGYTIRNVARCWTYE 286

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRI 342
           T + L  E+ NE+P N+Y +YF P+  L I
Sbjct: 287 TAVALGVEIANELPYNDYFEYFGPDFKLHI 316


>gi|321264702|ref|XP_003197068.1| histone deacetylase 3 [Cryptococcus gattii WM276]
 gi|317463546|gb|ADV25281.1| Histone deacetylase 3, putative [Cryptococcus gattii WM276]
          Length = 475

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/341 (58%), Positives = 258/341 (75%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S   ++Y++  +VG+ ++G  HPM+PHRL +T+ LVLSY LH+KM  + P  A   EL Q
Sbjct: 35  SNPSVAYYHPKNVGNYHYGERHPMRPHRLELTNQLVLSYGLHEKMSYHAPRAATEEELLQ 94

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH ADYV+FL R+TP       ++ TK+N+G+DCP+F +LF FC+ YAGG++ AAR+L++
Sbjct: 95  FHEADYVDFLKRVTPKNAQALTKDWTKFNVGDDCPIFYDLFSFCKQYAGGSLAAARKLSS 154

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VLGILELL+YH RVLYIDID+HHGDGV+EA
Sbjct: 155 GSADIAINWSGGLHHAKKGEASGFCYVNDIVLGILELLRYHPRVLYIDIDIHHGDGVQEA 214

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RV+TVSFHK+   FFP TG++ EIG   GK++ +NVPL+DGIDD S+  LFK ++
Sbjct: 215 FYLSNRVLTVSFHKYAADFFPNTGNLSEIGSDLGKYFCLNVPLQDGIDDESYISLFKAVM 274

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              +  + P AIVLQCGADSL  DRLG FNLSI  H ECVRF+K F LPLL  GGGGY +
Sbjct: 275 EPTITIFKPSAIVLQCGADSLGCDRLGTFNLSIAAHGECVRFIKSFGLPLLALGGGGYRQ 334

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            +V+RCWT ETG+L   +L NE+P+N Y ++FAP+  L  P
Sbjct: 335 SSVSRCWTYETGVLAGVQLSNELPQNNYYEFFAPDYKLHPP 375


>gi|262301851|gb|ACY43518.1| histone deacetylase [Cryptocellus centralis]
          Length = 283

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 184/284 (64%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ ++SKV+E Y P A++LQCG+DSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFQPLVSKVMEMYQPSAVILQCGSDSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GH +C+ FVKK+NLP+LV GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHGKCLEFVKKYNLPMLVLGGGGYTIRNVAR 283


>gi|262301925|gb|ACY43555.1| histone deacetylase [Prokoenenia wheeleri]
          Length = 282

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 185/283 (65%), Positives = 236/283 (83%), Gaps = 1/283 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQATDIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA+Y TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAYYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD SF R+F+ +ISKV+E Y P A++LQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESFERIFQPLISKVMEMYQPSALILQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
           +GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NVA
Sbjct: 240 SGDRLGCFNLTLKGHGKCVEFVKKYNLPTLILGGGGYTIRNVA 282


>gi|58270458|ref|XP_572385.1| histone deacetylation-related protein [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117922|ref|XP_772342.1| hypothetical protein CNBL2100 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254955|gb|EAL17695.1| hypothetical protein CNBL2100 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228643|gb|AAW45078.1| histone deacetylation-related protein, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 475

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/341 (58%), Positives = 258/341 (75%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S   ++Y++  +VG+ ++G  HPM+PHRL +T+ LVLSY LH+KM  + P  A   EL +
Sbjct: 35  SNPSVAYYHPKNVGNYHYGERHPMRPHRLELTNQLVLSYGLHEKMSYHAPRAATEEELLE 94

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH ADYV+FL R+TP       ++ TK+N+G+DCP+F +LF FC+ YAGG++ AAR+L++
Sbjct: 95  FHEADYVDFLKRVTPKNAQALTKDWTKFNVGDDCPIFYDLFSFCKQYAGGSLAAARKLSS 154

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCYIND+VLGILELL+YH RVLYIDID+HHGDGV+EA
Sbjct: 155 GSADIAINWSGGLHHAKKGEASGFCYINDIVLGILELLRYHPRVLYIDIDIHHGDGVQEA 214

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RV+TVSFHK+   FFP TG++ EIG   GK++ +NVPL+DGIDD S+  LFK ++
Sbjct: 215 FYLSNRVLTVSFHKYAADFFPNTGNLSEIGSDLGKYFCLNVPLQDGIDDESYISLFKAVM 274

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              +  + P AIVLQCGADSL  DRLG FNLSI  H ECVRF+K F LPLL  GGGGY +
Sbjct: 275 EPTITIFKPSAIVLQCGADSLGCDRLGTFNLSIAAHGECVRFIKSFGLPLLALGGGGYRQ 334

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            +V+RCWT ETG+L   +L NE+P+N Y ++FAP+  L  P
Sbjct: 335 SSVSRCWTYETGVLAGVQLSNELPQNNYYEFFAPDYKLHPP 375


>gi|307107820|gb|EFN56062.1| hypothetical protein CHLNCDRAFT_145535 [Chlorella variabilis]
          Length = 453

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 205/361 (56%), Positives = 253/361 (70%), Gaps = 24/361 (6%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K+KI+YFYD D    Y+GP+HPMKP R+ MTH LVL Y LHK +++YRP  A   EL  F
Sbjct: 5   KNKIAYFYDNDYTGYYYGPDHPMKPQRIAMTHQLVLGYGLHKHLDVYRPRLAQYDELTAF 64

Query: 64  HSADYVEFLHRITPDTQHLFRQE--------------------LTKYNLGEDCPVFENLF 103
           HS ++++ L   TP+ Q   R +                      ++ +  DCP+F  LF
Sbjct: 65  HSEEFIDMLRSTTPEMQARRRAQGQALHSMHSMHSMLKAKWDSYLRWGIEYDCPIFHGLF 124

Query: 104 EFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 163
           +FC+ YA  +ID A +LN+   DIAINWAGGLHHAKK EASGFCYIND VLGILELLK++
Sbjct: 125 KFCRQYAAASIDGAYKLNHGQADIAINWAGGLHHAKKAEASGFCYINDCVLGILELLKHN 184

Query: 164 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH----KFGDLFFPGTGDVKEIGEREGKFY 219
            RVLYIDID+HHGDGVEEAFY TDRVM VSFH      G  FFPGTG ++EIGE +GK Y
Sbjct: 185 PRVLYIDIDIHHGDGVEEAFYTTDRVMCVSFHLKQEWGGQPFFPGTGALEEIGEYQGKGY 244

Query: 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA 279
           ++NVPL  GID   +  LFK IISKV+E + PGAIVLQCGADSL GDRLG FNL+++GHA
Sbjct: 245 SLNVPLVQGIDTEQYLGLFKPIISKVMEVFQPGAIVLQCGADSLVGDRLGMFNLTLEGHA 304

Query: 280 ECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECS 339
           E VR+VK F LP+LV GGGGYTK  VAR WT+ET +L + E+ + +P+  Y+ YF+PE  
Sbjct: 305 EAVRYVKSFGLPILVLGGGGYTKTTVARAWTLETAVLCEQEVEDALPQQMYLDYFSPEYR 364

Query: 340 L 340
           L
Sbjct: 365 L 365


>gi|429962861|gb|ELA42405.1| hypothetical protein VICG_00504 [Vittaforma corneae ATCC 50505]
          Length = 417

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 190/342 (55%), Positives = 257/342 (75%), Gaps = 1/342 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K+ Y YD ++G  ++   HPMKP R+ MTH L+++Y LHK M+I RP  A    L  FHS
Sbjct: 4   KVLYLYDPEIGCYHYAKGHPMKPLRVQMTHSLIVNYGLHKYMDIKRPLHASYDNLINFHS 63

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ++ +  +   ++L K+N+ EDCPVF  LF++C++ AGGT+ AA +LN+   
Sbjct: 64  EDYINFLSTVSNENMNQLVKDLHKFNIKEDCPVFTGLFDYCKLTAGGTMMAAHKLNSGEY 123

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINWAGGLHHAK+ EASGFCY+ND+VLGILELLK + RVLYIDID+HHGDGVEEAFY 
Sbjct: 124 DIAINWAGGLHHAKRSEASGFCYVNDIVLGILELLKVYERVLYIDIDIHHGDGVEEAFYT 183

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT+SFHK+GD +FPGTG ++++G  +GK+YA+NVPLKDGIDD ++ ++F  I+S++
Sbjct: 184 TDRVMTLSFHKYGD-YFPGTGMLEDVGYAKGKYYAVNVPLKDGIDDQTYQQVFNPIVSRI 242

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y P  +VLQCGADS++GD+LGCFNLS  GH  CV+FV+ FN+P ++ GGGGYT ENV
Sbjct: 243 MEMYRPSVVVLQCGADSISGDKLGCFNLSNIGHGNCVKFVRSFNIPTIILGGGGYTIENV 302

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           ++ W  +T + L   +  ++P NEYI Y+ P   L IP  +I
Sbjct: 303 SKVWAYDTAMALGVNIEKDLPYNEYIDYYGPSYKLEIPKLNI 344


>gi|262301893|gb|ACY43539.1| histone deacetylase [Plathemis lydia]
          Length = 281

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 188/282 (66%), Positives = 235/282 (83%), Gaps = 1/282 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    + +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEYNK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  DI INW GGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASDICINWGGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL G
Sbjct: 180 GDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFNPIISKVMETFQPSAVVLQCGADSLTG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           DRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NV+R
Sbjct: 240 DRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSR 281


>gi|407921727|gb|EKG14866.1| Histone deacetylase superfamily [Macrophomina phaseolina MS6]
          Length = 577

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/347 (55%), Positives = 256/347 (73%), Gaps = 1/347 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +K +++Y YD D+G   + P H MKP R+ MTH LV++Y L+K ME+YR   A  +E+
Sbjct: 1   MTNKTRVAYMYDPDIGCYDYEPGHCMKPFRIRMTHDLVMTYGLYKHMEVYRAKPATGLEM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            QFH+ +Y+EFL R+TPDT    +QE  KY++  DCPVF+ LFE+C I AGG+++ A RL
Sbjct: 61  TQFHTDEYIEFLQRVTPDTLGSCQQEALKYDISGDCPVFDGLFEYCSISAGGSMEGAARL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N   CDIA+NWAGGLHHAKK +A GFCY+ND+VL  LELL+ + RVLYIDIDVHHGDGVE
Sbjct: 121 NRGRCDIAVNWAGGLHHAKKNQAGGFCYVNDIVLACLELLRVYQRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMT SFHKFG+ F+PGTG + +IG  +GK YA+NVPL+DGI D ++  +F+ 
Sbjct: 181 EAFYTTDRVMTCSFHKFGE-FYPGTGHLMDIGIGKGKKYAVNVPLRDGITDEAYRGIFEA 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +IS +++ + P A+VLQCGADSL+GDRLG FNLS++GHA CV FVK F LP ++ GGGGY
Sbjct: 240 VISDIMKCFRPEAVVLQCGADSLSGDRLGSFNLSMEGHANCVNFVKSFGLPTMILGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           +  NVAR W  ET   +   +   +P ++Y +Y+ PE  L +P  +I
Sbjct: 300 SIRNVARTWAYETAQAVGQPVGKVLPFSDYYEYYCPEYLLDVPQSNI 346


>gi|262301913|gb|ACY43549.1| histone deacetylase [Periplaneta americana]
          Length = 283

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 188/284 (66%), Positives = 236/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DYV FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYVRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ +GG++ AA +LN Q  +I INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAAAVKLNKQASEICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH +CV FVKK+ LP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGKCVEFVKKYGLPFLMVGGGGYTIRNVSR 283


>gi|262301865|gb|ACY43525.1| histone deacetylase [Ephemerella inconstans]
          Length = 282

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 187/283 (66%), Positives = 235/283 (83%), Gaps = 1/283 (0%)

Query: 25  PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
           PMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS +Y+ FL  I PD    + 
Sbjct: 1   PMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDEYIRFLRSIRPDNMSEYN 60

Query: 85  QELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 144
           +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  DI INW GGLHHAKK EAS
Sbjct: 61  KQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASDICINWGGGLHHAKKSEAS 120

Query: 145 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 204
           GFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct: 121 GFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 179

Query: 205 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 264
           TGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL 
Sbjct: 180 TGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFNPIISKVMETFQPSAVVLQCGADSLT 239

Query: 265 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           GDRLGCFNL++ GH +CV FVKK+ LP L+ GGGGYT  NV+R
Sbjct: 240 GDRLGCFNLTVKGHGKCVEFVKKYGLPFLMVGGGGYTIRNVSR 282


>gi|430811164|emb|CCJ31339.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 513

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/342 (56%), Positives = 253/342 (73%), Gaps = 19/342 (5%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++YFYD DVG+  +G  HPMKPHR+ MTH L+++Y L+KKMEIYR   A   E+ QFHS
Sbjct: 20  RVAYFYDSDVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKKMEIYRAKPATKHEMCQFHS 79

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+EFL R+T +    + +E  ++N+G+DCPVFE LFEFC I  GG+++ A RLN   C
Sbjct: 80  DDYIEFLSRVTLENMDNYIKEQGRFNVGDDCPVFEGLFEFCAISGGGSMEGAARLNRGKC 139

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NWA                  D+VLGI+ELL+Y+ RVLYIDIDVHHGDGVEEAFY 
Sbjct: 140 DIALNWA------------------DIVLGIIELLRYYPRVLYIDIDVHHGDGVEEAFYT 181

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+G+ +FPGTG++++IG  +GK+Y++N PL+DGIDD S+  +F+ ++S  
Sbjct: 182 TDRVMTCSFHKYGE-YFPGTGELRDIGVGKGKYYSVNFPLRDGIDDESYAYVFEPVVSAC 240

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E Y PGA+VLQCGADSLAGDRLGCFNLS+ GHA CV+FVKKF LP LV GGGGYT  NV
Sbjct: 241 MEWYRPGAVVLQCGADSLAGDRLGCFNLSMKGHASCVKFVKKFGLPTLVLGGGGYTMRNV 300

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           +R WT ETG++ D E+  E+P N+Y +Y+ P   L +P  ++
Sbjct: 301 SRTWTYETGLINDVEIGPEMPFNDYYEYYGPTYELNVPASNM 342


>gi|393230311|gb|EJD37919.1| hypothetical protein AURDEDRAFT_116664 [Auricularia delicata
           TFB-10046 SS5]
          Length = 551

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/344 (56%), Positives = 255/344 (74%), Gaps = 4/344 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ ++SY+YD DVGS  +GPNHPMKP R+ MTHHLV SY +  KM++ RP +A P+++A 
Sbjct: 2   ARKRVSYYYDNDVGSFSYGPNHPMKPFRMRMTHHLVASYGMLDKMQVLRPRRADPIQMAA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLN 121
           FH+ +YV+FL ++TP+T      +  +Y L E D P FE LFEFC +YAGG++DAA R+N
Sbjct: 62  FHTDEYVDFLSKVTPETAEELTGKGQRYLLTELDNPAFEGLFEFCSLYAGGSLDAAERIN 121

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL+   RVLYIDID HHGDGVEE
Sbjct: 122 DGSSDIAINWSGGLHHAKKREASGFCYVNDIVLCILELLRTFPRVLYIDIDCHHGDGVEE 181

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRV+T+SFHK+G+ +FPGTG + + G  +G  Y+INVP KDGI D  F  +F+  
Sbjct: 182 AFYGTDRVLTLSFHKYGE-YFPGTGALADRGRGKGLGYSINVPFKDGITDADFRDIFERT 240

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           + +V + Y P AIVLQCGADSLAGD+LGC N+S++ HA CV+FV+    PL++ GGGGYT
Sbjct: 241 MRRVADWYRPSAIVLQCGADSLAGDKLGCLNISMEAHANCVQFVRALGTPLVLLGGGGYT 300

Query: 302 KENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRIP 343
            +NVAR WT ET   L    ++P ++P N+Y ++F P   L +P
Sbjct: 301 VKNVARVWTFETACALGIQDDIPRDLPFNDYFEWFGPRYRLEVP 344


>gi|262301861|gb|ACY43523.1| histone deacetylase [Eumesocampa frigilis]
          Length = 283

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 186/284 (65%), Positives = 236/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS +Y+ FL  I PD     
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTKFHSDEYIRFLRSIRPDNMSEH 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ LFEFCQ+ AGG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAGAVKLNKQASEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD SF  +F  I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESFESIFVPIVSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFN+++ GHA+CV F+K++  PLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNVTLKGHAKCVEFMKQYQAPLLILGGGGYTIRNVAR 283


>gi|157813978|gb|ABV81734.1| putative histone deacetylase 1 [Prodoxus quinquepunctellus]
          Length = 283

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 187/284 (65%), Positives = 234/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAXEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  +I INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH  CV  VK+F LP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGGGGYTIRNVSR 283


>gi|427794091|gb|JAA62497.1| Putative histone deacetylase complex catalytic component rpd3,
           partial [Rhipicephalus pulchellus]
          Length = 417

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/314 (61%), Positives = 254/314 (80%)

Query: 27  KPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQE 86
           KP RL +TH LV+ Y L+KKM+++RP++A   ++ +FHS +Y++FL R+TP     F + 
Sbjct: 1   KPQRLSVTHSLVMHYGLYKKMQVFRPYRASSHDMCRFHSEEYIDFLERVTPQNIQTFTKS 60

Query: 87  LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 146
           L+ +N+G+DCPVF+ L++FC +Y G +++ A +LNN+ CDIAINW+GGLHHAKK EASGF
Sbjct: 61  LSHFNVGDDCPVFDGLYDFCSMYTGASLEGAVKLNNECCDIAINWSGGLHHAKKFEASGF 120

Query: 147 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTG 206
           CY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTG
Sbjct: 121 CYVNDIVIAILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTG 180

Query: 207 DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 266
           D+ E+G   G++Y++NVPLK+GIDD S+ ++FK +I  V+E + P  IVLQCGADSLAGD
Sbjct: 181 DMYELGAESGRYYSVNVPLKEGIDDASYFQVFKPVIQGVMEFFQPSCIVLQCGADSLAGD 240

Query: 267 RLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 326
           RLGCFNLSI GH ECV+F+++  LPLLV GGGGYT  NVAR WT ET +LLD  + +EIP
Sbjct: 241 RLGCFNLSIRGHGECVKFIRELGLPLLVLGGGGYTVRNVARAWTYETSLLLDEPVSSEIP 300

Query: 327 ENEYIKYFAPECSL 340
            NEY +YFAP+ +L
Sbjct: 301 YNEYFEYFAPDFTL 314


>gi|157813952|gb|ABV81721.1| putative histone deacetylase 1 [Limulus polyphemus]
 gi|262301849|gb|ACY43517.1| histone deacetylase [Carcinoscorpius rotundicauda]
          Length = 283

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 184/284 (64%), Positives = 235/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ M H+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMAHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ ++SKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYESIFQPLVSKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GH +CV FVKK+++P+L  GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHGKCVEFVKKYSMPMLQLGGGGYTIRNVAR 283


>gi|387593483|gb|EIJ88507.1| histone deacetylase 1 [Nematocida parisii ERTm3]
 gi|387597137|gb|EIJ94757.1| histone deacetylase 1 [Nematocida parisii ERTm1]
          Length = 427

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 188/337 (55%), Positives = 248/337 (73%), Gaps = 1/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           KISYFYD ++G+  + P HPMKPHR+ +TH L+++Y + K++ +Y P  A   +L +FHS
Sbjct: 3   KISYFYDQEIGNYKYAPGHPMKPHRIRLTHSLIMNYSVFKRLNVYSPVAASFEDLTRFHS 62

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+EFL  I  +      +EL+KYN+ EDCPVFE ++E+CQ  AGG+I  A  +N  + 
Sbjct: 63  DDYIEFLQGIRKENADAKEKELSKYNMIEDCPVFEGVYEYCQKSAGGSIQGAAHINEGVS 122

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D++INW+GGLHHAK+ EASGFCY+ND+VLGILELL+Y+ RV+YIDIDVHHGDGVEEAFY 
Sbjct: 123 DVSINWSGGLHHAKRREASGFCYVNDIVLGILELLRYNERVMYIDIDVHHGDGVEEAFYC 182

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           +DRVMT+SFH  G+ FFPGTG V ++G  +G+ Y+IN+PL  GIDD ++  +FK ++   
Sbjct: 183 SDRVMTISFHMHGE-FFPGTGAVTDVGIEKGRGYSINIPLNSGIDDNTYLSIFKPVVGAA 241

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           VE + P  IVLQCGADSLAGDRLGCFNL+  GH  CV FVK  N+P+LV GGGGYT  NV
Sbjct: 242 VEKFRPNVIVLQCGADSLAGDRLGCFNLTHKGHGGCVEFVKSLNIPILVLGGGGYTISNV 301

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           +R W  ET IL D ++  E+P  EY  ++ P  +L I
Sbjct: 302 SRAWAYETAILADVDVATELPYTEYFDHYHPNYTLEI 338


>gi|384486542|gb|EIE78722.1| hypothetical protein RO3G_03427 [Rhizopus delemar RA 99-880]
          Length = 409

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/330 (58%), Positives = 251/330 (76%), Gaps = 9/330 (2%)

Query: 27  KPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDT------Q 80
           +P R+ M H++V++Y L+KK++I +P +    ++ +FHS +YV FL  +TPD       Q
Sbjct: 12  QPKRMHMVHNMVVNYGLYKKLDIVKPTRCTAFQMTRFHSDEYVNFLQTVTPDNLESLALQ 71

Query: 81  HL-FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAK 139
           H    Q + ++N+GEDCPVFE LFEFC I AGG+I AA +L N   DIAINW+GGLHHAK
Sbjct: 72  HGGLEQGIARFNVGEDCPVFEGLFEFCSISAGGSIGAANKLLNGEADIAINWSGGLHHAK 131

Query: 140 KCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD 199
           K EASGFCY+ND+VLGILELL+YH RVLY+DIDVHHGDGVEEAFY TDRVMT SFHKFG+
Sbjct: 132 KTEASGFCYVNDIVLGILELLRYHQRVLYVDIDVHHGDGVEEAFYTTDRVMTCSFHKFGE 191

Query: 200 LFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCG 259
            FFPGTGD+K+ G  +GK YA+NVPL+DGIDD ++  +F+ +I  +++ Y PGA+VLQCG
Sbjct: 192 -FFPGTGDIKDTGLGKGKRYAVNVPLRDGIDDETYKSVFQPVIQHIMDWYRPGAVVLQCG 250

Query: 260 ADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDT 319
            DSL+GDRLGCFNLS+ GHA CV F+K FN+P+++ GGGGYT  NVAR WT ETG+ +  
Sbjct: 251 GDSLSGDRLGCFNLSMRGHASCVEFIKSFNIPMMMVGGGGYTIRNVARTWTFETGLAVGE 310

Query: 320 ELP-NEIPENEYIKYFAPECSLRIPNGHIV 348
           +L   E+P N Y +Y+ PE  L +P+ ++ 
Sbjct: 311 DLTEQELPYNNYFEYYGPEYKLDVPSNNMT 340


>gi|366990473|ref|XP_003675004.1| hypothetical protein NCAS_0B05480 [Naumovozyma castellii CBS 4309]
 gi|342300868|emb|CCC68632.1| hypothetical protein NCAS_0B05480 [Naumovozyma castellii CBS 4309]
          Length = 451

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/337 (56%), Positives = 250/337 (74%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V + ++G  HPMKP RL +T HLV SY LHK M++Y   +A   E++QFHS
Sbjct: 29  RVSYHFNPKVSNYHYGVRHPMKPFRLMLTDHLVSSYGLHKIMDLYETREATREEMSQFHS 88

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY+EFL ++TP+    + R  L K+N+G+DCP+F+N++++  +Y G ++DA+R+L N  
Sbjct: 89  QDYIEFLSKVTPENLSKMPRGTLEKFNIGDDCPIFQNIYDYSTLYTGASLDASRKLINDQ 148

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 149 SDIAINWSGGLHHAKKNNPSGFCYVNDIVLSILNLLRYHPRVLYIDIDLHHGDGVQEAFY 208

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHKF   FFPGTGD  EIG  +GK +A+NVPL+DGIDD S+  LFK+II  
Sbjct: 209 TTDRVFTISFHKFNGEFFPGTGDFDEIGCAKGKHFAMNVPLEDGIDDDSYINLFKSIIDP 268

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++  Y P  I+ QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+LV GGGGYT  N
Sbjct: 269 LITAYKPTVIIQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGIPMLVVGGGGYTPRN 328

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETG+L +  LP+EIPE   +   F P+ SL
Sbjct: 329 VSRLWTYETGVLNNVLLPSEIPEEIPFRDSFGPDYSL 365


>gi|313238138|emb|CBY13235.1| unnamed protein product [Oikopleura dioica]
          Length = 419

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 189/336 (56%), Positives = 252/336 (75%), Gaps = 3/336 (0%)

Query: 9   YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
           Y+YD  VGS ++G  HPMKPHR+ +TH LVLSY+L+K M  YRP  A   +L  FH+ DY
Sbjct: 21  YYYDPVVGSFHYGQRHPMKPHRIHITHSLVLSYNLNKHMHFYRPKLATKWDLCTFHAQDY 80

Query: 69  VEFLHRITPDTQHLFRQELTKYNLGE---DCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
           ++FL R+T D    F  EL K+++G    D PVF  ++EFCQ + GG+++AA+ +N  L 
Sbjct: 81  IDFLSRVTNDNMSQFSAELKKFSVGSPNGDSPVFGGMYEFCQRFCGGSLNAAQHMNQGLS 140

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+ INWAGGLHHAKK EASGFCY+ND+ + ILELLK+H RV+Y+DIDVHHGDGV+EAFY 
Sbjct: 141 DVTINWAGGLHHAKKAEASGFCYVNDICVAILELLKHHPRVMYLDIDVHHGDGVQEAFYL 200

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           +DRVMTVSFHK+G  FFPGTGD+ EIGE++GK+Y++NVPL+DGI+D ++  ++K I+  +
Sbjct: 201 SDRVMTVSFHKYGRDFFPGTGDMYEIGEQQGKYYSVNVPLRDGINDETYHDVYKPIMDGI 260

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++ Y P A+V+QCGADSL  DRLG FNLSI GH E V  +K + LP++  GGGGYT  NV
Sbjct: 261 IKHYRPTALVMQCGADSLGMDRLGVFNLSISGHGEAVNHMKSYGLPIMYLGGGGYTLRNV 320

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 341
           ARCWT ET I+   ++ NE+P N+Y  +F P+  L+
Sbjct: 321 ARCWTYETSIIAGQKIANELPYNDYHGFFNPDYVLQ 356


>gi|157813976|gb|ABV81733.1| putative histone deacetylase 1 [Cydia pomonella]
          Length = 283

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/284 (65%), Positives = 234/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  +I INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH  CV  VK+F LP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGGGGYTIRNVSR 283


>gi|342321515|gb|EGU13448.1| Histone deacetylase [Rhodotorula glutinis ATCC 204091]
          Length = 586

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/371 (54%), Positives = 262/371 (70%), Gaps = 17/371 (4%)

Query: 4   KDKISYFYD--------------GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEI 49
           K  ++YFYD               DVG+  F   HPMKPHR+ M H+L+ +Y L K M++
Sbjct: 19  KRTVAYFYDVASKALTSLAHARTDDVGAYAFNLVHPMKPHRIKMAHNLITNYGLDKHMDV 78

Query: 50  YRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIY 109
            +P +  P E+ +FH+ +Y++ L R+TP+T         ++ +GEDCP FE LFEFC I 
Sbjct: 79  LKPDRCPPHEMTRFHTDEYIDCLARVTPETFDEMTGHGQRFLIGEDCPPFEGLFEFCSIS 138

Query: 110 AGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYI 169
           AGG++ AARRL     D+A+NWAGGLHHAKK EASGFCYIND+VL ILELL+YH+RVLYI
Sbjct: 139 AGGSLSAARRLIEGKADVAVNWAGGLHHAKKREASGFCYINDIVLAILELLRYHSRVLYI 198

Query: 170 DIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGI 229
           DIDVHHGDGVEEAFY TDRVMT SFHKFGD FFPGTG   + G   GK YA+N PLKDGI
Sbjct: 199 DIDVHHGDGVEEAFYTTDRVMTASFHKFGD-FFPGTGAEGDKGRGRGKGYAVNFPLKDGI 257

Query: 230 DDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFN 289
           DD S+  +F+ I+  +++ Y PGA+VLQCGADSLA D+LG FNLS++GHA CV F++ FN
Sbjct: 258 DDESYRSVFRPIMQAIMDWYRPGAVVLQCGADSLASDKLGSFNLSMNGHASCVAFMRTFN 317

Query: 290 LPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI-- 347
           +PL++ GGGGYT  NVAR W  ETGI    ++  ++P NEYI+YF PE  L +P+ ++  
Sbjct: 318 VPLIIVGGGGYTIRNVARTWAYETGIACGVQMQRDLPFNEYIEYFGPEFKLDVPSNNMDN 377

Query: 348 VCSFKEIDKFI 358
             S + +DK +
Sbjct: 378 ANSREYLDKIV 388


>gi|157813974|gb|ABV81732.1| putative histone deacetylase 1 [Antheraea paukstadtorum]
          Length = 283

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/284 (65%), Positives = 234/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNMAEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  +I INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH  CV  VK+F LP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGGGGYTIRNVSR 283


>gi|256071317|ref|XP_002571987.1| histone deacetylase [Schistosoma mansoni]
 gi|353229514|emb|CCD75685.1| histone deacetylase 1 [Schistosoma mansoni]
          Length = 469

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/302 (64%), Positives = 245/302 (81%), Gaps = 1/302 (0%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFC 106
           ME+YRP KAY  ++ +FHS +YV+FL  + PD  H F +++ ++N+GEDCPVF+ LFEFC
Sbjct: 1   MEVYRPSKAYSEDMTRFHSDEYVKFLKNVRPDNMHEFNKQMQRFNVGEDCPVFDGLFEFC 60

Query: 107 QIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARV 166
           Q+ AGG+I AA +LN Q  DIAINW GGLHHAKK EASGFCYIND+V+GILELLKYH RV
Sbjct: 61  QLSAGGSIAAAVKLNKQQTDIAINWGGGLHHAKKSEASGFCYINDIVIGILELLKYHQRV 120

Query: 167 LYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLK 226
           LY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+K+IG   GK+YA+N PL+
Sbjct: 121 LYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLKDIGAGRGKYYAVNCPLR 179

Query: 227 DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVK 286
           DG+DD  + R+FK +++KV+ET+ PGA+VLQCGADSL GDRLGCFNLS+ GH +CV F++
Sbjct: 180 DGMDDDCYERIFKPVVTKVMETFRPGAVVLQCGADSLCGDRLGCFNLSLKGHGKCVEFIR 239

Query: 287 KFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGH 346
            F LPLL+ GGGGYT  NVARCWT ET I L TE+PN++P N+Y +YF P+  L I   +
Sbjct: 240 SFPLPLLLVGGGGYTIRNVARCWTNETSIALATEIPNDLPYNDYYEYFGPDFKLHISPSN 299

Query: 347 IV 348
           + 
Sbjct: 300 MA 301


>gi|268571987|ref|XP_002641202.1| Hypothetical protein CBG09063 [Caenorhabditis briggsae]
          Length = 455

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/365 (52%), Positives = 260/365 (71%), Gaps = 2/365 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           +SK ++ Y+YD +VG+ Y+GP H MKPHR+ M + L+LSY L++ + IYRP  A    + 
Sbjct: 10  QSKRRVCYYYDTNVGNYYYGPGHVMKPHRIRMANELILSYGLYQNLSIYRPRPASFEAMT 69

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRL 120
            FHS +Y+ FL     D  + F     K++   +DCP+F+ L+EFCQ+  GG++ AA +L
Sbjct: 70  TFHSDEYITFLRDANIDNLNSFGASKGKFSQNNDDCPLFDGLYEFCQLSCGGSLAAAIKL 129

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N +  DIAINW GGLHHAKK E+SGFCY ND+V+GILELLK+H RVLY+DID+HHGDGVE
Sbjct: 130 NKKKTDIAINWMGGLHHAKKSESSGFCYTNDIVVGILELLKFHKRVLYVDIDIHHGDGVE 189

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAF+ T+RVMTVSFH+FG+ FFPGTGD+K++G   G+ Y++NVPL DGI D S+ R+F  
Sbjct: 190 EAFFDTNRVMTVSFHRFGN-FFPGTGDIKDVGIYNGRLYSVNVPLSDGITDESYERIFVP 248

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++ KV+E + P A+VLQCGADSL GDRLG FNLS+ GH  C  F +K+++PL++ GGGGY
Sbjct: 249 VMKKVMEMFDPQAVVLQCGADSLYGDRLGKFNLSLRGHGACAEFFRKYDVPLMMVGGGGY 308

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCSFKEIDKFILF 360
           T  NVARCW  ET I +  E+PNE+P N Y +YF P+  L I    ++ +     K +  
Sbjct: 309 TPRNVARCWAYETSIAVGIEVPNELPFNNYYEYFGPDYKLHIEPSQVLKNDNPDQKLLEL 368

Query: 361 NKQIL 365
            K+I 
Sbjct: 369 QKEIF 373


>gi|367010594|ref|XP_003679798.1| hypothetical protein TDEL_0B04580 [Torulaspora delbrueckii]
 gi|359747456|emb|CCE90587.1| hypothetical protein TDEL_0B04580 [Torulaspora delbrueckii]
          Length = 446

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/340 (56%), Positives = 252/340 (74%), Gaps = 8/340 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V + ++G  HPMKP RL +T HLV SY LHK M++Y    A   E+A+FH+
Sbjct: 27  RVSYHFNPKVSNYHYGVRHPMKPFRLLLTDHLVSSYGLHKIMDLYETRVATSEEIAEFHT 86

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY++FLH++TP+    + R  L K+N+G+DCP+F+NLF +C++YAG ++DAAR+L N  
Sbjct: 87  QDYIDFLHKVTPENLSKMPRGTLEKFNIGDDCPIFQNLFNYCKLYAGASLDAARKLINDQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKSNPSGFCYVNDIVLAILNLLRYHPRVLYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTG+  E+G   GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVYTVSFHKYNGEFFPGTGNHDEVGCANGKHFAMNVPLEDGIDDDSYINLFKSIMDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ +Y P  I+ QCGADSL  DR+GCFNL+I GH ECV+F++ F +P+LV GGGGYT  N
Sbjct: 267 LITSYKPTVIIQQCGADSLGHDRIGCFNLTIKGHGECVKFIRSFGIPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETG----ILLDTELPNEIPENEYIKYFAPECSL 340
           V+R W  ETG    +LL  ELP EIP   +  +F P+ SL
Sbjct: 327 VSRLWAYETGVLNNVLLSKELPEEIP---FRNWFGPDYSL 363


>gi|262301839|gb|ACY43512.1| histone deacetylase [Armadillidium vulgare]
          Length = 283

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/284 (69%), Positives = 241/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ F+  I PD  + +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQDEMTKFHSDDYIRFIRSIRPDNMNEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ K+N+GEDCPVF+ L+EFCQ+ AGG+I  A +LN Q CDIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQKFNVGEDCPVFDGLYEFCQLSAGGSIAGAVKLNKQACDIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD SF  +F  I++KV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSFESIFVPILTKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|255581997|ref|XP_002531796.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
 gi|223528562|gb|EEF30584.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
          Length = 455

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/310 (63%), Positives = 251/310 (80%), Gaps = 1/310 (0%)

Query: 33  MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNL 92
           MTH L+  Y L + M++ +P  A   +L +FH+ DYV FL  ITP+TQ    ++L ++N+
Sbjct: 1   MTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNV 60

Query: 93  GEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDL 152
           GEDCPVF+ L+ FCQ YAGG++  A +LN+ LCDIAINWAGGLHHAKKCEASGFCY+ND+
Sbjct: 61  GEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDI 120

Query: 153 VLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG 212
           VL ILELLK H RVLY+DID+HHGDGVEEAFY TDRVMTVSFHKFGD +FPGTGD+++IG
Sbjct: 121 VLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIG 179

Query: 213 EREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 272
             +GK+Y++NVPL DGIDD S+  LFK II KV+E + PGA+VLQCGADSL+GDRLGCFN
Sbjct: 180 YGKGKYYSLNVPLDDGIDDESYHFLFKPIIGKVMEVFKPGAVVLQCGADSLSGDRLGCFN 239

Query: 273 LSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIK 332
           LSI GHAECV+F++ FN+PLL+ GGGGYT  NVARCW  ETG+ L  ++ +++P++EY +
Sbjct: 240 LSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGMDVDDKMPQHEYYE 299

Query: 333 YFAPECSLRI 342
           YF P+ +L +
Sbjct: 300 YFGPDYTLHV 309


>gi|157813948|gb|ABV81719.1| putative histone deacetylase 1 [Forficula auricularia]
          Length = 283

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/284 (65%), Positives = 235/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS  YV FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDXYVRFLRSIRPDNXXEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ +GG++ AA +LN Q  +I INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAAAVKLNKQASEICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESIFVPIISKVMETFXPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH +CV FVKK+ LP L+ GGGGYT  NV+R
Sbjct: 240 TGDRLGCFNLTVRGHGKCVEFVKKYGLPFLMVGGGGYTIRNVSR 283


>gi|262301901|gb|ACY43543.1| histone deacetylase [Hexagenia limbata]
          Length = 279

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 185/278 (66%), Positives = 232/278 (83%), Gaps = 1/278 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS +Y+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDEYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  DI INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASDICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFNPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
            GDRLGCFNL++ GH +CV FVKK+ LP L+ GGGGYT
Sbjct: 240 TGDRLGCFNLTVKGHGKCVEFVKKYGLPFLMVGGGGYT 277


>gi|262301907|gb|ACY43546.1| histone deacetylase [Neogonodactylus oerstedii]
          Length = 283

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/284 (68%), Positives = 241/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ F+  I PD  + +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQDEMTKFHSDDYIRFIRSIRPDNMNEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ K+N+GEDCPVF+ L+EFCQ+ +GG+I  A +LN Q CDIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQKFNVGEDCPVFDGLYEFCQLSSGGSIAGAVKLNKQACDIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I++KV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFVPIMTKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL+I GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTIKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|365983432|ref|XP_003668549.1| hypothetical protein NDAI_0B02710 [Naumovozyma dairenensis CBS 421]
 gi|343767316|emb|CCD23306.1| hypothetical protein NDAI_0B02710 [Naumovozyma dairenensis CBS 421]
          Length = 453

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/337 (56%), Positives = 248/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V + ++G  HPMKP RL +T HLV SY LHK M++Y    A   E+ QFHS
Sbjct: 31  RVSYHFNPKVSNYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRPATNEEMVQFHS 90

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY++FL ++TP+    + R  L K+N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 91  EDYLDFLSKVTPENLSKMPRGTLEKFNIGDDCPIFQNLYDYSTLYTGASLDATRKLINDQ 150

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCYIND+VL I+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 151 SDIAINWSGGLHHAKKNNPSGFCYINDIVLSIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 210

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHKF   FFPGTGD  E G  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 211 TTDRVFTISFHKFNGEFFPGTGDYDETGCAKGKHFAMNVPLEDGIDDDSYINLFKSIMDP 270

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ +Y P  IV QCGADSL  DRLGCFNL+I GH ECV+F+K F +P+LV GGGGYT  N
Sbjct: 271 LITSYKPTVIVQQCGADSLGHDRLGCFNLNIKGHGECVKFIKSFGIPMLVVGGGGYTPRN 330

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL +  LPNE+PE   +   F P+ SL
Sbjct: 331 VSRLWTYETGILNNVLLPNELPEGIPFRDSFGPDYSL 367


>gi|409079404|gb|EKM79765.1| hypothetical protein AGABI1DRAFT_72379 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 421

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/342 (56%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y++D DVG+  +G  HPMKPHR+ +TH LV +YD+  KM + RP +A P +++ 
Sbjct: 2   SKRRVAYYFDPDVGAYTYGLGHPMKPHRIRVTHDLVAAYDMLPKMHVLRPKRASPEDISA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV FL R+TP+T        T++ +G+D P FE LFEFC I AGG+I AA+R+++
Sbjct: 62  FHTDEYVHFLTRVTPETAEELTYHGTRFLVGDDNPGFEGLFEFCSISAGGSICAAQRISS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+ + RVLYIDID HHGDGVEEA
Sbjct: 122 GAADIAINWAGGLHHAKKREASGFCYVNDIVLGILELLRSYPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ +FPGTG  ++ G  +GK YAINVPLKDGI D S+  +F+ +I
Sbjct: 182 FYTTDRVMTCSFHKFGE-YFPGTGTQEDKGRGKGKGYAINVPLKDGITDESYKSVFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +K+++ + P A+VLQCGADSLAGD+LGCFN+++ GHA CV+F+++ N+PL++ GGGGYT 
Sbjct: 241 AKILDVFQPSAVVLQCGADSLAGDKLGCFNVTMKGHAHCVQFLRQQNIPLILLGGGGYTV 300

Query: 303 ENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
           +NVA+ WT ET   L  + E+   +P NEY ++FAP   L +
Sbjct: 301 KNVAKTWTFETACALGIEDEIDFSLPWNEYFEWFAPRYRLEV 342


>gi|426192656|gb|EKV42592.1| histone deacetylase complex catalytic component RPD3 [Agaricus
           bisporus var. bisporus H97]
          Length = 427

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/342 (56%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y++D DVG+  +G  HPMKPHR+ +TH LV +YD+  KM + RP +A P +++ 
Sbjct: 2   SKRRVAYYFDPDVGAYTYGLGHPMKPHRIRVTHDLVAAYDMLPKMHVLRPKRASPEDISA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV FL R+TP+T        T++ +G+D P FE LFEFC I AGG+I AA+R+++
Sbjct: 62  FHTDEYVHFLTRVTPETAEELTYHGTRFLVGDDNPGFEGLFEFCSISAGGSICAAQRISS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+ + RVLYIDID HHGDGVEEA
Sbjct: 122 GAADIAINWAGGLHHAKKREASGFCYVNDIVLGILELLRSYPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ +FPGTG  ++ G  +GK YAINVPLKDGI D S+  +F+ +I
Sbjct: 182 FYTTDRVMTCSFHKFGE-YFPGTGTQEDKGRGKGKGYAINVPLKDGITDESYKSVFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +K+++ + P A+VLQCGADSLAGD+LGCFN+++ GHA CV+F+++ N+PL++ GGGGYT 
Sbjct: 241 AKILDVFQPSAVVLQCGADSLAGDKLGCFNVTMKGHAHCVQFLRQQNIPLILLGGGGYTV 300

Query: 303 ENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
           +NVA+ WT ET   L  + E+   +P NEY ++FAP   L +
Sbjct: 301 KNVAKTWTFETACALGIEDEIDFSLPWNEYFEWFAPRYRLEV 342


>gi|449542777|gb|EMD33755.1| hypothetical protein CERSUDRAFT_142079 [Ceriporiopsis subvermispora
           B]
          Length = 560

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/342 (56%), Positives = 255/342 (74%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD DVG+  +G  H MKP R+ +TH LV +Y++  KM++ R  +A    + +
Sbjct: 2   SKRRVAYYYDPDVGAFAYGLGHYMKPQRMRITHELVSAYNMLGKMDVLRASRASAETMTR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FL R+TP+T        +++ +G+D PVFE +FEFC I AGG+I AA+RL +
Sbjct: 62  FHTDEYVQFLSRVTPETAEELTFHGSRFLVGDDNPVFEGVFEFCSISAGGSIAAAQRLTS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCYIND+VL ILELL+   RVLYIDID HHGDGVEEA
Sbjct: 122 GAADIAINWAGGLHHAKKREASGFCYINDIVLAILELLRSVPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ +FPGTGD+++ G  +GK YA+NVPLKDGI+D SF  +F  +I
Sbjct: 182 FYTTDRVMTCSFHKFGE-YFPGTGDIRDRGRGKGKGYAVNVPLKDGINDESFMSVFSPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + P AIVLQCGADSL+GD+LGCFNLS++GHA CV++++  N+PL++ GGGGYT 
Sbjct: 241 DKVLEVFQPSAIVLQCGADSLSGDKLGCFNLSMEGHARCVQYIRARNIPLVLLGGGGYTV 300

Query: 303 ENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
           +NVAR W  ET   L  + E+   +P NEY ++F P   L +
Sbjct: 301 KNVARTWAYETACALGIENEIDPNMPWNEYFEWFGPRYRLEV 342


>gi|448114584|ref|XP_004202614.1| Piso0_001458 [Millerozyma farinosa CBS 7064]
 gi|359383482|emb|CCE79398.1| Piso0_001458 [Millerozyma farinosa CBS 7064]
          Length = 456

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/339 (56%), Positives = 253/339 (74%), Gaps = 8/339 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY ++ DV   +FGP+HPMKP RL +T HL+LSY L++KM++Y P +A   E  +FHS 
Sbjct: 35  VSYHFNPDVSKYHFGPHHPMKPFRLKLTDHLMLSYKLYEKMDLYAPRRATKDEFLEFHSD 94

Query: 67  DYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
           DYV FL  +TP+ +Q L  Q L ++N+G+DCP+F+ ++++  IY+G ++DA+R+L   + 
Sbjct: 95  DYVNFLQSVTPENSQKLTNQILAQFNIGDDCPIFDGMYDYSAIYSGASLDASRKLIAGMS 154

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK E SGFCY+ND+VL IL LL+ H R++YIDID+HHGDGV+EAF+ 
Sbjct: 155 DIAINWSGGLHHAKKSEPSGFCYVNDIVLSILNLLRVHPRIMYIDIDLHHGDGVQEAFFL 214

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFH +   FFPGTG + EIG ++GK YA+NVPLKDGIDD S+ RLFK+II  +
Sbjct: 215 TDRVMTVSFHMYNGEFFPGTGSIDEIGLQKGKNYAVNVPLKDGIDDDSYIRLFKSIIEPL 274

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  + P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+LV GGGGYT  NV
Sbjct: 275 IVKFQPSCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFVKSFGIPMLVLGGGGYTPRNV 334

Query: 306 ARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL 340
           +R W  ET +L    LD ++PN IP  +   +F P+ SL
Sbjct: 335 SRLWCYETSVLNDVTLDPKIPNFIPTYD---WFGPDYSL 370


>gi|262301889|gb|ACY43537.1| histone deacetylase [Libinia emarginata]
          Length = 283

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/284 (67%), Positives = 241/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ F+  I PD  + +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQDEMTKFHSDDYIRFIRSIRPDNMNEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ K+N+GEDCPVF+ L+EFCQ+ +GG+I  A +LN Q CDIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQKFNVGEDCPVFDGLYEFCQLSSGGSIAGAVKLNKQACDIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I++KV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFVPILTKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|401840632|gb|EJT43375.1| HOS2-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 452

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 247/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL +FHS
Sbjct: 27  RVSYHFNPKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLEFHS 86

Query: 66  ADYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY+ FL +++PD +  L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 87  EDYINFLSKVSPDNSNKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL D  LP +IPEN  +   F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPENIPFRDSFGPDYSL 363


>gi|262301825|gb|ACY43505.1| histone deacetylase [Acheta domesticus]
          Length = 281

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 186/282 (65%), Positives = 233/282 (82%), Gaps = 1/282 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH L+L+Y L++KMEIYRPHKA   E+ +FHS DYV FL  I PD    + +
Sbjct: 1   MKPHRIXMTHXLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYVRFLRSIRPDNMSEYNK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ L+EFCQ+ +GG++ AA +LN Q  +I INW GGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLYEFCQLSSGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL G
Sbjct: 180 GDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           DRLGCFNL++ GH +CV FVKK+ LP L+ GGGGYT  NV+R
Sbjct: 240 DRLGCFNLTVRGHGKCVEFVKKYGLPFLMVGGGGYTIRNVSR 281


>gi|125581295|gb|EAZ22226.1| hypothetical protein OsJ_05881 [Oryza sativa Japonica Group]
          Length = 509

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/343 (60%), Positives = 257/343 (74%), Gaps = 6/343 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL--HKKMEIYRPHKAYPVEL 60
            K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L    KME+ R  +  P   
Sbjct: 22  QKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVLR--RLPPAAS 79

Query: 61  AQFHSADYVEFLHR-ITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
               S   +  L R + P+TQ    + L ++N+G DCPVF+ L+ +CQ YAG ++ AA +
Sbjct: 80  TSAASIRRLRRLPRAVNPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVK 139

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELLK H RVLYIDID+HHGDGV
Sbjct: 140 LNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGV 199

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY T+RVMTVSFHKFGD +FPGTGD+++IG  EGK+Y +NVPL DGIDD S+  +FK
Sbjct: 200 EEAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFK 258

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            IISKV+E Y PGA+VLQCGADSL+GDRLGCFNLS  GHAECV+F++ FN+PLL+ GGGG
Sbjct: 259 PIISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGG 318

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           YT  NVARCW  ETG+ L  EL  ++P NEY +YF PE SL +
Sbjct: 319 YTIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSLYV 361


>gi|326477614|gb|EGE01624.1| histone deacetylase RPD3 [Trichophyton equinum CBS 127.97]
          Length = 666

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 183/291 (62%), Positives = 235/291 (80%), Gaps = 1/291 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K +I+YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ QF
Sbjct: 64  KKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKKMEIYRAKPASKFEMTQF 123

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ +Y++FL ++TPD    + +E ++YN+G+DCPVF+ LFEFC I AGG+++ A RLN  
Sbjct: 124 HTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRN 183

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
            CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLYIDIDVHHGDGVEEAF
Sbjct: 184 KCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYIDIDVHHGDGVEEAF 243

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTG++++IG   GK+Y++N PL+DGIDD S+  +F+ +I 
Sbjct: 244 YTTDRVMTVSFHKYGE-YFPGTGELRDIGVGAGKYYSVNFPLRDGIDDVSYKGIFEPVIK 302

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLV 294
            V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+
Sbjct: 303 HVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLI 353


>gi|448112012|ref|XP_004201987.1| Piso0_001458 [Millerozyma farinosa CBS 7064]
 gi|359464976|emb|CCE88681.1| Piso0_001458 [Millerozyma farinosa CBS 7064]
          Length = 456

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/339 (56%), Positives = 253/339 (74%), Gaps = 8/339 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY ++ DV   +FGP+HPMKP RL +T HL+LSY L++KM++Y P +A   EL +FHS 
Sbjct: 35  VSYHFNPDVSKYHFGPHHPMKPFRLKLTDHLILSYKLYEKMDLYAPRRATKEELLEFHSD 94

Query: 67  DYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
           DYV FL  +TP+ +Q L  Q L ++N+G+DCP+F+ ++++  IY+G ++DA+R+L   + 
Sbjct: 95  DYVNFLQSVTPENSQKLTNQILAQFNIGDDCPIFDGMYDYSSIYSGASLDASRKLIAGMS 154

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK E SGFCY+ND+VL IL LL+ H R++YIDID+HHGDGV+EAF+ 
Sbjct: 155 DIAINWSGGLHHAKKSEPSGFCYVNDIVLSILNLLRVHPRIMYIDIDLHHGDGVQEAFFL 214

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFH +   FFPGTG + EIG ++GK  A+NVPLKDGIDD S+ RLFK+II  +
Sbjct: 215 TDRVMTVSFHMYNGEFFPGTGSIDEIGLQKGKNCAVNVPLKDGIDDDSYIRLFKSIIEPL 274

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  + P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+LV GGGGYT  NV
Sbjct: 275 IVKFQPSCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFVKSFGIPMLVLGGGGYTPRNV 334

Query: 306 ARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL 340
           +R W  ET +L    LD ++PN IP  +   +F P+ SL
Sbjct: 335 SRLWCYETSVLNDVTLDPKIPNFIPTYD---WFGPDYSL 370


>gi|19114991|ref|NP_594079.1| histone deacetylase (class I) Hos2 [Schizosaccharomyces pombe
           972h-]
 gi|3024397|sp|O13298.1|PHD1_SCHPO RecName: Full=Histone deacetylase phd1
 gi|2641699|dbj|BAA23598.1| histone deacetylase 1 [Schizosaccharomyces pombe]
 gi|2706458|emb|CAA15916.1| histone deacetylase (class I) Hos2 [Schizosaccharomyces pombe]
          Length = 434

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/339 (54%), Positives = 250/339 (73%), Gaps = 1/339 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
            K +++Y  D  VG+ ++G  HPMKPHR+ +T+HLV+ Y LH KM ++ P  A   E+++
Sbjct: 24  QKKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSE 83

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH  DY++FL R+TPD    F  +  ++N+G+DCPVF+  +EF Q  AG ++DA+R+L  
Sbjct: 84  FHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQ 143

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAK+ EASGFCY+ND+VL IL +L++  RVLYIDID+HHGDGV++A
Sbjct: 144 GQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQA 203

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY +DRV+TVSFHK+   FFP TG+  E G + GK++A+NVPL+DGI D  +T LFK+II
Sbjct: 204 FYESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSII 263

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              + T+ P AIVLQCGADSL  DRLG FNLSI  H ECVRF + FN+P+LV GGGGYT 
Sbjct: 264 EPTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTL 323

Query: 303 ENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSL 340
            NVAR W  ET I ++ ++P+E+P E  Y ++FAP+ +L
Sbjct: 324 RNVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTL 362


>gi|146183953|ref|XP_001027442.2| Histone deacetylase family protein [Tetrahymena thermophila]
 gi|146143417|gb|EAS07200.2| Histone deacetylase family protein [Tetrahymena thermophila SB210]
          Length = 1480

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 177/338 (52%), Positives = 243/338 (71%), Gaps = 7/338 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +I+Y++D  +G   +   HPMKP R+ MT  L   Y     +  Y       + L  FHS
Sbjct: 18  RIAYYFDETIGCYNYANGHPMKPLRVAMTDTLDRDY-----VNTYIRAVNEKI-LTNFHS 71

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+E + ++ P+ +H +  +L ++N GEDCPV + L+++C  YA G++  A  L NQ  
Sbjct: 72  DEYIELIQKVHPNNKHFYEDQLYRFNFGEDCPVLDRLYDYCLTYAAGSVAGANLLANQKV 131

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIA+NW+GGLHHAK+ EASGFCYIND VL ILELLK + RVLYIDID+HHGDGVEEAFY 
Sbjct: 132 DIALNWSGGLHHAKQSEASGFCYINDCVLAILELLKVYQRVLYIDIDIHHGDGVEEAFYL 191

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHK+ D +FPGTG + +IG ++GKF+A+N PL +G+DD SF  + K ++ K+
Sbjct: 192 TDRVMTCSFHKYKD-YFPGTGHLDDIGTQQGKFHAVNFPLNEGLDDESFVYIMKPVLQKI 250

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           ++T+ P A+VLQCGADSL+GDRLGCFNLSI GH EC RF+K F +P+++ GGGGYT  NV
Sbjct: 251 MDTFRPEAVVLQCGADSLSGDRLGCFNLSIKGHGECARFMKSFGVPIILLGGGGYTLRNV 310

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            RCW  ET ++++ EL +++P+NE++ YF PE  L +P
Sbjct: 311 PRCWVYETSVVVNEELQDQMPQNEFLHYFGPEYKLHMP 348


>gi|294654649|ref|XP_456707.2| DEHA2A08712p [Debaryomyces hansenii CBS767]
 gi|199429042|emb|CAG84663.2| DEHA2A08712p [Debaryomyces hansenii CBS767]
          Length = 456

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/374 (52%), Positives = 268/374 (71%), Gaps = 16/374 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY Y+  V   +FGP+HPMKP RL +T HLV+SY L+++M++Y P +A   EL +FH+ 
Sbjct: 35  VSYHYNPQVSQYHFGPHHPMKPFRLMLTDHLVISYKLYEQMDLYTPRRATKEELLEFHAE 94

Query: 67  DYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
           DY++FL  ITP+ T  +  Q+L ++N+G+DCPVF+ ++++  IYAG ++DA+R+L + + 
Sbjct: 95  DYIDFLQTITPEKTLKMSDQKLAQFNIGDDCPVFDGIYDYSSIYAGASLDASRKLISGMS 154

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+EAFY 
Sbjct: 155 DIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQEAFYV 214

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+   FFPGTG V E G  +GK YA+NVPLKDGIDD S+ RLFK+I+  +
Sbjct: 215 TDRVMTVSFHKYNGEFFPGTGSVDETGLGKGKNYAVNVPLKDGIDDDSYIRLFKSIMEPL 274

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  + P  IV QCGADSL  DRLGCFNL+I  H ECV+++K F +P+LV GGGGYT  NV
Sbjct: 275 ITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKYIKSFGIPMLVLGGGGYTPRNV 334

Query: 306 ARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEID 355
           +R W  ET +L    LD  +PN +P ++   +F P+ SL      RI N +     + + 
Sbjct: 335 SRLWCYETSVLNDVTLDHTIPNYLPTHD---WFGPDYSLHPQLDGRIDNKNSKKYLESVK 391

Query: 356 KFILFNKQILYFIF 369
           + +L  +Q+ Y  +
Sbjct: 392 QEVL--EQLRYLTY 403


>gi|410077677|ref|XP_003956420.1| hypothetical protein KAFR_0C02920 [Kazachstania africana CBS 2517]
 gi|372463004|emb|CCF57285.1| hypothetical protein KAFR_0C02920 [Kazachstania africana CBS 2517]
          Length = 453

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/337 (56%), Positives = 250/337 (74%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V + ++G NHPMKP RL +T HLV SY LHK M++Y   +A   E++QFHS
Sbjct: 29  RVSYHFNPKVSNYHYGVNHPMKPFRLMLTDHLVSSYGLHKIMDLYETREATKEEMSQFHS 88

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           +DY++FL +I+PDT   + R  L K+N+G DCP+FEN++++  +Y G ++DA+R+L N  
Sbjct: 89  SDYLDFLEKISPDTLNKIPRGTLEKFNIGSDCPIFENIYDYSTLYTGASLDASRKLINGQ 148

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK   SGFCYIND+VL IL LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 149 SEIAINWSGGLHHAKKNNPSGFCYINDIVLSILNLLRYHPRVLYIDIDLHHGDGVQEAFY 208

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTG+  EIG   GK +A+NVPL DGIDD S+ +LFK+II  
Sbjct: 209 TTDRVFTISFHKYNGEFFPGTGNYDEIGCSGGKHFAMNVPLNDGIDDDSYIKLFKSIIDP 268

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ +Y P  I+ QCGADSL  DRLGCFNL+I  H ECV+FV  F +P+LV GGGGYT  N
Sbjct: 269 LITSYQPTVIIQQCGADSLGHDRLGCFNLNIKAHGECVKFVSSFGIPMLVVGGGGYTPRN 328

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R W  ETGIL +  LP E+PE   + + F P+ SL
Sbjct: 329 VSRLWAYETGILNNVLLPKELPEELPFRENFGPDYSL 365


>gi|6321244|ref|NP_011321.1| Hos2p [Saccharomyces cerevisiae S288c]
 gi|1723948|sp|P53096.1|HOS2_YEAST RecName: Full=Probable histone deacetylase HOS2
 gi|1322819|emb|CAA96906.1| RTL1 [Saccharomyces cerevisiae]
 gi|151943623|gb|EDN61933.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|285812021|tpg|DAA07921.1| TPA: Hos2p [Saccharomyces cerevisiae S288c]
 gi|349578040|dbj|GAA23206.1| K7_Hos2p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 452

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 247/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL QFHS
Sbjct: 27  RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86

Query: 66  ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 87  EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 363


>gi|299748382|ref|XP_001839089.2| histone deacetylase RPD3 [Coprinopsis cinerea okayama7#130]
 gi|298407947|gb|EAU82749.2| histone deacetylase RPD3 [Coprinopsis cinerea okayama7#130]
          Length = 557

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/355 (55%), Positives = 258/355 (72%), Gaps = 11/355 (3%)

Query: 3   SKDKISYFYD--------GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHK 54
           SK K++YFYD         DVGS  +G  HPMKPHR+ +TH LV +YD+  +M + RP +
Sbjct: 2   SKRKVAYFYDPCGLTNIAADVGSYTYGLGHPMKPHRIRVTHDLVTAYDMLDQMHVLRPTR 61

Query: 55  AYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTI 114
           A    + +FH+ +YV FL+R+TP+T        T++ +GED P FE +FEFC I AGG+I
Sbjct: 62  ATAETMTKFHTDEYVHFLNRVTPETAEELTYHGTRFLVGEDNPAFEGVFEFCSISAGGSI 121

Query: 115 DAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVH 174
            AA+R+ +   DIAINWAGGLHHAKK EASGFCYIND+VLGILELL+ + RVLYIDID H
Sbjct: 122 GAAQRIASGAADIAINWAGGLHHAKKREASGFCYINDIVLGILELLRIYPRVLYIDIDCH 181

Query: 175 HGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSF 234
           HGDGVEEAFY TDRVMT SFHKFG+ +FPGTG  ++ G  +GK YA+NVPLKDGI D SF
Sbjct: 182 HGDGVEEAFYTTDRVMTCSFHKFGE-YFPGTGTQEDRGRGKGKGYAVNVPLKDGITDESF 240

Query: 235 TRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLV 294
             +F+ +ISK++E + P A+VLQCGADSLAGD+LGCFNL++ GHA C +F++K N+PL++
Sbjct: 241 KSVFEPVISKILEVFKPSAVVLQCGADSLAGDKLGCFNLTMYGHAHCTQFLRKHNIPLIL 300

Query: 295 TGGGGYTKENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            GGGGYT +NVAR WT ET   L  + ++   +P N Y ++F P   L +   ++
Sbjct: 301 LGGGGYTVKNVARTWTYETACALGIENDIDVNLPWNPYFEWFGPRYRLEVAENNM 355


>gi|190407133|gb|EDV10400.1| histone deacetylase phd1 [Saccharomyces cerevisiae RM11-1a]
 gi|256269371|gb|EEU04669.1| Hos2p [Saccharomyces cerevisiae JAY291]
 gi|392299558|gb|EIW10652.1| Hos2p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 452

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 247/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL QFHS
Sbjct: 27  RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86

Query: 66  ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 87  EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 363


>gi|156836690|ref|XP_001642394.1| hypothetical protein Kpol_246p5 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112911|gb|EDO14536.1| hypothetical protein Kpol_246p5 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 453

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/337 (56%), Positives = 248/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V + ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL  FHS
Sbjct: 31  RVSYHFNPKVSNYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATKDELLDFHS 90

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL ++TP+    + R  L KYN+G+DCP+F+NL+++  +YAG ++DA+R+L N  
Sbjct: 91  DDYVSFLQKVTPENLSKMPRGTLEKYNIGDDCPIFQNLYDYSALYAGASLDASRKLINNQ 150

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 151 SDIAINWSGGLHHAKKTNPSGFCYVNDIVLAILNLLRYHPRVLYIDIDLHHGDGVQEAFY 210

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTG+  EIG  +GK +A+NVPL+DGIDD S+  LFK+II  
Sbjct: 211 TTDRVFTISFHKYNGEFFPGTGNYDEIGCAQGKHFAMNVPLEDGIDDDSYINLFKSIIDP 270

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ +Y P  I+ QCGADSL  DRLGCFNL+I  H ECV+F++ F +P+LV GGGGYT  N
Sbjct: 271 LITSYKPTVIIQQCGADSLGHDRLGCFNLNIKAHGECVKFIRSFGIPMLVVGGGGYTPRN 330

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETG+L +  LP E+PE+  +   F P+ SL
Sbjct: 331 VSRLWTYETGVLNNVLLPAELPEDIPFRDSFGPDHSL 367


>gi|260947174|ref|XP_002617884.1| hypothetical protein CLUG_01343 [Clavispora lusitaniae ATCC 42720]
 gi|238847756|gb|EEQ37220.1| hypothetical protein CLUG_01343 [Clavispora lusitaniae ATCC 42720]
          Length = 449

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/339 (55%), Positives = 252/339 (74%), Gaps = 8/339 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY ++ DV   ++GP HPMKP RL +T HLV+SY LH+KM++Y P +A   EL +FHS 
Sbjct: 29  VSYHFNPDVSRYHYGPYHPMKPFRLMLTDHLVVSYKLHEKMDLYSPRRATKEELLEFHSQ 88

Query: 67  DYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
           DY++FL  +TP+    L   +L ++N+G+DCP+F+ ++++  IYAG ++DA+R+L + + 
Sbjct: 89  DYMDFLQSVTPELASKLGEDKLAQFNIGDDCPIFDGMYDYSSIYAGASLDASRKLISGMS 148

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK E SGFCY+ND+VL IL LL+ H RV+YIDID+HHGDGV+EAFY 
Sbjct: 149 DIAINWSGGLHHAKKFEPSGFCYVNDIVLAILNLLRVHPRVMYIDIDLHHGDGVQEAFYT 208

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHKF   FFPGTG + E G   GK +A+NVPLKDGIDD S+T LFK+++  +
Sbjct: 209 TDRVMTVSFHKFNGEFFPGTGSIDETGIGSGKNFAVNVPLKDGIDDDSYTYLFKSVMEPL 268

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  + P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+LV GGGGYT  NV
Sbjct: 269 ITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFVKSFGIPMLVLGGGGYTPRNV 328

Query: 306 ARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL 340
           +R W  ET +L    L+++LP +IP  +   +F P+ SL
Sbjct: 329 SRLWCYETSVLNDVTLESKLPQDIPSYD---WFGPDYSL 364


>gi|365760843|gb|EHN02531.1| Hos2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 475

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 247/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL +FHS
Sbjct: 27  RVSYHFNPKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLEFHS 86

Query: 66  ADYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY+ FL +++PD +  L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 87  EDYINFLSKVSPDNSNKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL D  LP +IPEN  +   F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPENIPFRDSFGPDYSL 363


>gi|440294331|gb|ELP87348.1| histone deacetylase, putative [Entamoeba invadens IP1]
          Length = 449

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 249/342 (72%), Gaps = 2/342 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YFYD +VG   +G  HPMKP R  + HHL++ Y +++++ IY+P +A   +L  FHS
Sbjct: 3   RVCYFYDHNVGEFDYGFGHPMKPLRNKLVHHLIMEYGIYQRLNIYKPWRATNEQLEMFHS 62

Query: 66  ADYVEFLHRITPDTQHL--FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL R+TP+   L  FR+ L ++N  +DCPVF+ L+ F Q   G ++  A ++N +
Sbjct: 63  KDYIDFLQRVTPEMAQLQHFRRSLEEFNFTDDCPVFDGLYPFVQTVVGSSLGCAMKINER 122

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+ +NW+GGLHHAKK +ASGFCYIND+V  ILELLK H+RVLYIDID HHGDGVEEAF
Sbjct: 123 AADVCVNWSGGLHHAKKSQASGFCYINDIVCAILELLKVHSRVLYIDIDHHHGDGVEEAF 182

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             T+RVMT+S HK+GD +FPGTGDV E+G  EGK Y+INVPLKDGI+D  + +LF  II 
Sbjct: 183 KATNRVMTLSLHKYGDNYFPGTGDVDEVGVDEGKNYSINVPLKDGINDDYYHKLFNPIID 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           + +E + PGA+V+QCGADSL GDRLG FNLSI GH EC++ VK F LP+++ GGGGYT  
Sbjct: 243 RAMEVFQPGAVVMQCGADSLNGDRLGFFNLSIQGHCECMKRVKAFGLPMILVGGGGYTVS 302

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNG 345
           N ARCW  ET    D  +P++IP N+Y++Y+ P+  + IP  
Sbjct: 303 NTARCWCYETAAACDLTIPDQIPVNDYLEYYVPDLKITIPTS 344


>gi|207345493|gb|EDZ72300.1| YGL194Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 453

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 247/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL QFHS
Sbjct: 27  RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86

Query: 66  ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 87  EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 363


>gi|157813950|gb|ABV81720.1| putative histone deacetylase 1 [Lithobius forticatus]
          Length = 283

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 240/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F+ I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFQPIVSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFN+++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNVTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|262301935|gb|ACY43560.1| histone deacetylase [Tomocerus sp. 'Tom2']
          Length = 283

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/284 (67%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMAEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN ++ DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKEVADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I+SKV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFNPILSKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 TGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|395330338|gb|EJF62722.1| histone deacetylase [Dichomitus squalens LYAD-421 SS1]
          Length = 464

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/360 (54%), Positives = 254/360 (70%), Gaps = 8/360 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVELA 61
           S+  +SY++   VG+ ++G +HPMKPHRL +T+ LVL Y L K++  IY P  A   EL 
Sbjct: 38  SRPIVSYYHPKGVGAQHYGEHHPMKPHRLTLTNALVLGYGLDKQIHNIYSPRPATQAELE 97

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H  DY+EFL R+TP  Q   +  + ++N  EDCP+F ++++FC++YAG ++ AAR+L 
Sbjct: 98  AYHDHDYIEFLSRVTPHNQSEMKSMIDRFNCVEDCPIFADMYDFCKMYAGASLAAARKLC 157

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL++H RVLYIDID+HHGDGVE 
Sbjct: 158 AGTTDIAINWSGGLHHAKKAEASGFCYVNDIVLAILELLRFHPRVLYIDIDIHHGDGVEF 217

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+   FFPGTG + + G   GK +A+NVPLKDGIDD  +  +FKT+
Sbjct: 218 AFYHTDRVMTVSFHKYTGDFFPGTGKLDDNGTGLGKHFALNVPLKDGIDDDMYLTIFKTV 277

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I   V  + P AIVLQCGADSL  DRLG FNLSI  H ECV FV+KFN+PLLV GGGGYT
Sbjct: 278 IDDTVTAFRPTAIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKFNVPLLVLGGGGYT 337

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
            +NV+RCWT ET +L+   +P+E+P   Y  +F        P  + R+ N +   S + +
Sbjct: 338 IKNVSRCWTYETSVLVGAAIPDELPVTIYDSFFRETKWKLHPPLTGRVENQNTASSLQRV 397


>gi|294888060|ref|XP_002772330.1| histone deacetylase 3, putative [Perkinsus marinus ATCC 50983]
 gi|239876449|gb|EER04146.1| histone deacetylase 3, putative [Perkinsus marinus ATCC 50983]
          Length = 498

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/344 (59%), Positives = 255/344 (74%), Gaps = 6/344 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  ++YFY+ D GS Y+G  HPMKP R+ M H LV+ Y L+K M +YRPH A   EL  F
Sbjct: 18  KADVTYFYEPDHGSYYYGEGHPMKPQRIRMAHDLVVGYGLYKHMTVYRPHVATDAELTNF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGE---DCPVFENLFEFCQIYAGGTIDAARRL 120
           H  +Y+ FL     D    +  +  ++ +G+   DCPVF+ L++F +  AGG++DAA  L
Sbjct: 78  HGEEYISFLKIANADNVRDYTSQSKRFRVGDIITDCPVFDGLYDFQRTLAGGSLDAAHEL 137

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
            ++  DIAINWAGGLHHAK+ EASGFCY+ND+VL ILELL++H RVLYIDIDVHHGDGVE
Sbjct: 138 CSRNADIAINWAGGLHHAKRNEASGFCYVNDIVLAILELLRFHPRVLYIDIDVHHGDGVE 197

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T RVMTVSFHK+GD FFPGTGD+ +IG  EG+FYA+NVPL +GI D  F+ LFKT
Sbjct: 198 EAFYQTSRVMTVSFHKYGD-FFPGTGDISDIGTGEGRFYALNVPLDEGITDDLFSDLFKT 256

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II++VVE Y PGAIVLQCGADSLA DRLG FNL++ GHA CVR VK F +PLL+ GGGGY
Sbjct: 257 IITRVVEIYQPGAIVLQCGADSLAHDRLGRFNLTLQGHANCVRLVKSFGIPLLLLGGGGY 316

Query: 301 TKENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
           T  NV+RCW  ET + L  D +L N++P N++  Y+AP+  L+I
Sbjct: 317 TIRNVSRCWAYETAVALNRDQDLSNQLPMNDFWHYYAPDYKLQI 360


>gi|262301867|gb|ACY43526.1| histone deacetylase [Endeis laevis]
          Length = 283

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 240/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVAGAVKLNKQATEIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDR+MTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRLMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F+ +ISKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYEKIFQPVISKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHAECV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAECVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|254570182|ref|XP_002492201.1| Histone deacetylase [Komagataella pastoris GS115]
 gi|238031998|emb|CAY69921.1| Histone deacetylase [Komagataella pastoris GS115]
 gi|328351311|emb|CCA37710.1| histone deacetylase phd1 [Komagataella pastoris CBS 7435]
          Length = 462

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 188/342 (54%), Positives = 252/342 (73%), Gaps = 2/342 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  +SY ++ +V   ++G  HPMKP RL +T HLV+SY L+++M++Y+P  A   EL QF
Sbjct: 33  KSNVSYHFNPNVSKYHYGVRHPMKPFRLLLTDHLVISYKLYEQMDLYQPRSATEDELKQF 92

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY+ FL  +TP+  + F Q+L K+N+G+DCPVFE +F++   YAG ++DA+R+L N 
Sbjct: 93  HSDDYITFLKNVTPENSNKFIQDLRKFNIGDDCPVFEGIFDYSSYYAGASLDASRKLING 152

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK E SGFCY+ND+VL IL LL+ H RVLYIDID+HHGDGV+EAF
Sbjct: 153 QSDIAINWSGGLHHAKKSEPSGFCYVNDIVLSILNLLRVHPRVLYIDIDIHHGDGVQEAF 212

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y +DRVMTVSFH++   FFPGTG+  E G   GK +A+NVPL+DGIDD ++ RLFK+++ 
Sbjct: 213 YLSDRVMTVSFHQYNGQFFPGTGNYDETGLGVGKHFALNVPLRDGIDDENYVRLFKSVME 272

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++ ++ P  IV QCGADSL  DRLG FNL+I  H ECV F+K F +PLLV GGGGYT  
Sbjct: 273 PLIRSFQPTCIVQQCGADSLGCDRLGGFNLNIRAHGECVNFIKSFGIPLLVLGGGGYTPR 332

Query: 304 NVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLRIPN 344
           NV+R W  ET I+ +T+L +++PE   +  +F P+ SL  PN
Sbjct: 333 NVSRLWCYETSIMTNTKLASKLPEELPFRNFFEPDYSLH-PN 373


>gi|262301899|gb|ACY43542.1| histone deacetylase [Lynceus sp. 'Lyn']
          Length = 283

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/284 (67%), Positives = 240/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQATEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFVPIMSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|388580110|gb|EIM20427.1| histone deacetylase [Wallemia sebi CBS 633.66]
          Length = 475

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/322 (58%), Positives = 243/322 (75%), Gaps = 1/322 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ M H+LVL+Y L KKM+I +P +A P E+ +FH+ +Y++FL  +TP+T     +
Sbjct: 1   MKPHRMRMVHNLVLNYGLDKKMQILKPPRASPEEMTRFHTDEYIDFLKHVTPETAADLTR 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
               +  GEDCP FE LFEFC I AGG+I AA RL +   DI++NWAGGLHHAKK EASG
Sbjct: 61  NHEIFLSGEDCPSFEGLFEFCSISAGGSIAAANRLTSGESDISVNWAGGLHHAKKREASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL I+ELL+YH RVLYIDID+HHGDGVEEAFY TDRV+T SFHK+ D +FPGT
Sbjct: 121 FCYVNDIVLAIIELLRYHQRVLYIDIDIHHGDGVEEAFYTTDRVLTCSFHKYPD-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           G   + G  +GK Y++N PL+DGIDD S+  +F+  I  ++E Y PGA+VLQCGADSLAG
Sbjct: 180 GSTDDTGMFKGKSYSVNFPLRDGIDDESYHSVFRPTIQHIMEWYRPGAVVLQCGADSLAG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           D+LG FNLS+ GHA+CV+FVK FNLP++V GGGGY   NV+R WT ETG+L+D  L  ++
Sbjct: 240 DKLGVFNLSMKGHADCVKFVKAFNLPMIVLGGGGYAVRNVSRTWTYETGLLVDKHLEEDL 299

Query: 326 PENEYIKYFAPECSLRIPNGHI 347
           P N+Y+ Y+ P   L +P  ++
Sbjct: 300 PFNDYLDYYGPRYKLDVPETNM 321


>gi|320581768|gb|EFW95987.1| Histone deacetylase [Ogataea parapolymorpha DL-1]
          Length = 466

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/340 (55%), Positives = 252/340 (74%), Gaps = 2/340 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +SY Y+ DV   ++G  HPMKP RL +T HLV++Y L+++M+IY+P +A   EL +FHS
Sbjct: 40  NVSYHYNPDVSKYHYGVRHPMKPFRLMLTDHLVIAYKLYEQMDIYQPRRATKEELLEFHS 99

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY++FL  +TPD    + Q L ++N+G+DCPVF+ ++++ QIYAG ++DA+R+L   + 
Sbjct: 100 EDYIKFLESVTPDNAKKYAQHLRQFNIGDDCPVFDGMYDYSQIYAGASLDASRKLIAGMS 159

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK E SGFCY+ND+VL IL LL+ H RVLYIDID+HHGDGV+EAFY 
Sbjct: 160 DIAINWSGGLHHAKKHEPSGFCYVNDIVLSILNLLRVHPRVLYIDIDLHHGDGVQEAFYL 219

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+   FFPGTG+  E+G  +GK +A+NVPL DGIDD S+  LFK+I+  V
Sbjct: 220 TDRVMTVSFHKYDGEFFPGTGNHDEVGLGKGKHFALNVPLHDGIDDESYISLFKSIMEPV 279

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  + P AIV QCGADSL  DRLG FNL+I  H ECV+FVK F +P+LV GGGGYT  NV
Sbjct: 280 ITNFRPTAIVQQCGADSLGCDRLGSFNLNIRAHGECVKFVKSFGIPMLVLGGGGYTPRNV 339

Query: 306 ARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLRIPN 344
           +R W  ET ++ + +L + +PE   +  +F P+ SL  PN
Sbjct: 340 SRLWCYETSVMTNVKLNSRLPEVLPFRTFFQPDYSLH-PN 378


>gi|401625811|gb|EJS43801.1| hos2p [Saccharomyces arboricola H-6]
          Length = 452

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 246/337 (72%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL +FHS
Sbjct: 27  RVSYHFNPKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLEFHS 86

Query: 66  ADYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL +++P+ T  L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 87  EDYVNFLSKVSPENTNKLPRGALENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLDDGIDDDSYINLFKSIVDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPILVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 363


>gi|159473829|ref|XP_001695036.1| histone deacetylase [Chlamydomonas reinhardtii]
 gi|158276415|gb|EDP02188.1| histone deacetylase [Chlamydomonas reinhardtii]
          Length = 419

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/338 (55%), Positives = 255/338 (75%), Gaps = 6/338 (1%)

Query: 1   MRSKDKI-SYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE 59
           M+S +K+ +YFYD ++G+  +G  +PM+PHR  M + LV SY L KKM + RP      E
Sbjct: 1   MKSAEKVVAYFYDEEIGNYCYGGGNPMRPHRARMCYSLVDSYGLTKKMMVQRPRPREFEE 60

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLG----EDCPVFENLFEFCQIYAGGTID 115
           L  FH+ DY+ FL  +TP+T      +L ++N+G     DCPVF+ ++E+CQ Y+GG++D
Sbjct: 61  LTDFHADDYINFLRGVTPNTVDENMMQLRRFNMGIAGEADCPVFDGMYEYCQTYSGGSVD 120

Query: 116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH 175
            A +L +   +IA NW+GG+HHAKK EASGFCY+ND+V+ ILELLK HARVLY+DID+HH
Sbjct: 121 GAAQLASGNAEIAFNWSGGMHHAKKAEASGFCYVNDIVMAILELLKTHARVLYVDIDIHH 180

Query: 176 GDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFT 235
           GDGVEEAFY TDRVMTVSFHK+G+ FFPGTG + +IG  +GK+Y +NVPLKDG+DD S+ 
Sbjct: 181 GDGVEEAFYLTDRVMTVSFHKYGE-FFPGTGALDDIGYGKGKYYTVNVPLKDGMDDDSYK 239

Query: 236 RLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
            L++ I+ KV+E Y PGAIV+ CGADSL+GDRLGCFNLS++GH+ C+ F+ +FN+P+L+ 
Sbjct: 240 LLYEPIMQKVMEMYQPGAIVMCCGADSLSGDRLGCFNLSLEGHSNCLEFLARFNVPMLIL 299

Query: 296 GGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKY 333
           GGGGYT  NVARCW  ETG ++  +LP+ +PE    +Y
Sbjct: 300 GGGGYTLRNVARCWCYETGRMMGIDLPDVLPEKALDEY 337


>gi|409082829|gb|EKM83187.1| hypothetical protein AGABI1DRAFT_104911 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 642

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/366 (53%), Positives = 257/366 (70%), Gaps = 10/366 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVELA 61
           S+  +SY++   VG+ ++G  HPMKPHRL +T+ LV+ Y L K++  IY P  A   EL 
Sbjct: 38  SRPIVSYYFPKGVGAQHYGERHPMKPHRLTLTNALVMGYGLDKQIHNIYDPRPATQEELE 97

Query: 62  QFHSADYVEFLHRITPDTQ--HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
            +H  DYVEFL R+TP +Q  +  +Q +  +N  EDCPVF ++++FC++YAG ++  AR+
Sbjct: 98  MYHDHDYVEFLSRVTPQSQAQNDMKQMIDSFNCIEDCPVFADMYDFCRLYAGASLAGARK 157

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           L     DIAINW+GGLHHAK+ EASGFCY+ND+VL ILELL+YH RVLYIDID+HHGDGV
Sbjct: 158 LCAGTTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILELLRYHPRVLYIDIDIHHGDGV 217

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           E AFY ++RVMTVSFHK+   FFPGTG + + G   GK Y +NVPL+DGIDD  +  +FK
Sbjct: 218 ELAFYQSNRVMTVSFHKYTGDFFPGTGKLDDNGSGPGKHYCLNVPLQDGIDDEMYLTIFK 277

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           T+I  +V  + P AIVLQCGADSL  DRLG FNLSI  H ECV FV+K+N+PLLV GGGG
Sbjct: 278 TVIDDIVTAFRPSAIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKYNVPLLVVGGGG 337

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFK 352
           YT +NV+RCWT ET +L+  E+P+E+P   Y  +FA       P  + ++ N +   S K
Sbjct: 338 YTIKNVSRCWTYETSVLVGAEIPDELPRTVYDAFFADSHWKLHPPLTGKVDNQNTPASLK 397

Query: 353 EIDKFI 358
            I   I
Sbjct: 398 RITMSI 403


>gi|358342847|dbj|GAA41197.2| histone deacetylase 1/2 [Clonorchis sinensis]
          Length = 446

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 183/283 (64%), Positives = 228/283 (80%), Gaps = 1/283 (0%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + +FHS +YV+FL  I PD  H F +++ ++N+GEDCPVF+ LFEFCQ+ AGG+I  A +
Sbjct: 1   MTKFHSDEYVKFLKSIRPDNMHEFNKQMQRFNVGEDCPVFDGLFEFCQLSAGGSIAGAVK 60

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN Q  DIAINW GGLHHAKK EASGFCYIND+V+GILELLKYH RVLY+DID+HHGDGV
Sbjct: 61  LNKQQTDIAINWGGGLHHAKKSEASGFCYINDIVMGILELLKYHQRVLYVDIDIHHGDGV 120

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMT SFHK+G+ +FPGTGD K+IG   GK+YA+N P++DG+DD  + R FK
Sbjct: 121 EEAFYTTDRVMTCSFHKYGE-YFPGTGDSKDIGAGRGKYYALNFPMRDGMDDECYERCFK 179

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +ISKV+E + PGA+VLQCGADSL+GDRLGCFNL++ GH +CV F++ F +PLL  GGGG
Sbjct: 180 PVISKVMEYFRPGAVVLQCGADSLSGDRLGCFNLTLKGHGKCVEFIRSFPIPLLQVGGGG 239

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           YT  NVARCWT ET I L TE+PN++P N+Y +YF P+  L I
Sbjct: 240 YTIRNVARCWTYETSIALATEIPNDLPYNDYYEYFGPDFKLHI 282


>gi|294931915|ref|XP_002780050.1| histone deacetylase 3, putative [Perkinsus marinus ATCC 50983]
 gi|239889894|gb|EER11845.1| histone deacetylase 3, putative [Perkinsus marinus ATCC 50983]
          Length = 413

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/344 (59%), Positives = 255/344 (74%), Gaps = 6/344 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  ++YFY+ D GS Y+G  HPMKP R+ M H LV+ Y L+K M +YRPH A   EL  F
Sbjct: 18  KADVTYFYEPDHGSYYYGEGHPMKPQRIRMAHDLVVGYGLYKHMTVYRPHVATDAELTNF 77

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGE---DCPVFENLFEFCQIYAGGTIDAARRL 120
           H  +Y+ FL     D    +  +  ++ +G+   DCPVF+ L++F +  AGG++DAA  L
Sbjct: 78  HGEEYISFLKIANADNVRDYTSQSKRFRVGDIITDCPVFDGLYDFQRTLAGGSLDAAHEL 137

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
            ++  DIAINWAGGLHHAK+ EASGFCY+ND+VL ILELL++H RVLYIDIDVHHGDGVE
Sbjct: 138 CSRNADIAINWAGGLHHAKRNEASGFCYVNDIVLAILELLRFHPRVLYIDIDVHHGDGVE 197

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T RVMTVSFHK+GD FFPGTGD+ +IG  EG+FYA+NVPL +GI D  F+ LFKT
Sbjct: 198 EAFYQTSRVMTVSFHKYGD-FFPGTGDISDIGTGEGRFYALNVPLDEGITDDLFSDLFKT 256

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           II++VVE Y PGAIVLQCGADSLA DRLG FNL++ GHA CVR VK F +PLL+ GGGGY
Sbjct: 257 IITRVVEIYQPGAIVLQCGADSLAHDRLGRFNLTLQGHANCVRLVKSFGIPLLLLGGGGY 316

Query: 301 TKENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
           T  NV+RCW  ET + L  D +L N++P N++  Y+AP+  L+I
Sbjct: 317 TIRNVSRCWAYETAVALNRDQDLSNQLPMNDFWHYYAPDYKLQI 360


>gi|1177634|emb|CAA62950.1| putative transcriptional regulator [Saccharomyces cerevisiae]
          Length = 452

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/324 (58%), Positives = 241/324 (74%), Gaps = 1/324 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL QFHS
Sbjct: 27  RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86

Query: 66  ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 87  EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN 328
           V+R WT ETGIL D  LP +IPE+
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPED 350


>gi|45198690|ref|NP_985719.1| AFR172Cp [Ashbya gossypii ATCC 10895]
 gi|44984700|gb|AAS53543.1| AFR172Cp [Ashbya gossypii ATCC 10895]
 gi|374108950|gb|AEY97856.1| FAFR172Cp [Ashbya gossypii FDAG1]
          Length = 449

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/337 (56%), Positives = 245/337 (72%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY Y+  V   ++G  HPMKP RL +T HLV  Y LHK M++Y    A   E+  FH+
Sbjct: 27  RVSYHYNSRVSQYHYGVRHPMKPFRLMLTDHLVSRYGLHKVMDLYETRAATKEEVLAFHA 86

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV+FL  + P+    L R  L K+N+G+DCP+F+ LFE+  +YAG ++DA+R+L N  
Sbjct: 87  QDYVDFLSHVAPENLNKLPRGSLEKFNIGDDCPIFQGLFEYSMLYAGASLDASRKLINGQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 147 SEIAINWSGGLHHAKKSNPSGFCYVNDIVLAILNLLRYHPRVLYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTGD+ EIG   GK +++NVPL DGIDD S+  LFK+II  
Sbjct: 207 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFSLNVPLNDGIDDDSYINLFKSIIDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           +V +Y P  I+ QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+L  GGGGYT  N
Sbjct: 267 LVTSYKPTVIIQQCGADSLGHDRLGCFNLNIRAHGECVKFVKSFGIPMLCVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL D  LP++IPE+  + ++F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPSDIPEDIPFREWFGPDYSL 363


>gi|440296394|gb|ELP89221.1| histone deacetylase Rpd3, putative [Entamoeba invadens IP1]
          Length = 450

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/343 (54%), Positives = 250/343 (72%), Gaps = 3/343 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YFYD +VG   +G  HPMKP R  + HHL++SY +++++ IY+P +A   +L  FHS
Sbjct: 3   RVFYFYDHNVGEFDYGFGHPMKPLRNKLVHHLIMSYGVYQRLNIYKPWRATNEQLEMFHS 62

Query: 66  ADYVEFLHRITPDTQHL--FRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNN 122
            +Y+EFL R+TP    L  FR+ L ++N   +DCPVF+ L+ F Q   G TI  A ++N 
Sbjct: 63  KEYIEFLQRVTPSKALLPYFRRSLEEFNFTVDDCPVFDGLYPFVQTVVGSTIGCAMKINE 122

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  D+ INW+GGLHHAKK +ASGFCYIND+V GI+ELLK H+RVLYIDID HHGDGVEEA
Sbjct: 123 RAADVCINWSGGLHHAKKSQASGFCYINDIVCGIMELLKVHSRVLYIDIDHHHGDGVEEA 182

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           F  T+RVMT+S HK+GD +FPGTGDV E+G  EGK Y+INVPLKDGI+D S+ +L+  II
Sbjct: 183 FKATNRVMTISLHKYGDNYFPGTGDVDEVGVEEGKNYSINVPLKDGINDESYHKLYMPII 242

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            + +E + PGA+V+QCGADSL GDRLG FNLSI GH  C+  VKKF +P+++ GGGGYT 
Sbjct: 243 DRAMEVFQPGAVVMQCGADSLNGDRLGFFNLSIQGHCACMTHVKKFGVPMILVGGGGYTV 302

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNG 345
            N ARCW  ET    D  +P++IP N+Y++Y+ P+  + IP  
Sbjct: 303 SNTARCWCYETAAACDLSIPDQIPINDYLEYYVPDMRITIPTS 345


>gi|426200699|gb|EKV50623.1| hypothetical protein AGABI2DRAFT_217434 [Agaricus bisporus var.
           bisporus H97]
          Length = 645

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/366 (53%), Positives = 257/366 (70%), Gaps = 10/366 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVELA 61
           S+  +SY++   VG+ ++G  HPMKPHRL +T+ LV+ Y L K++  IY P  A   EL 
Sbjct: 38  SRPIVSYYFPKGVGAQHYGERHPMKPHRLTLTNALVMGYGLDKQIHNIYDPRPATQEELE 97

Query: 62  QFHSADYVEFLHRITPDTQ--HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
            +H  DYVEFL R+TP +Q  +  +Q +  +N  EDCPVF ++++FC++YAG ++  AR+
Sbjct: 98  MYHDHDYVEFLSRVTPQSQAQNDMKQMIDSFNCIEDCPVFADMYDFCRLYAGASLAGARK 157

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           L     DIAINW+GGLHHAK+ EASGFCY+ND+VL ILELL+YH RVLYIDID+HHGDGV
Sbjct: 158 LCAGTTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILELLRYHPRVLYIDIDIHHGDGV 217

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           E AFY ++RVMTVSFHK+   FFPGTG + + G   GK Y +NVPL+DGIDD  +  +FK
Sbjct: 218 ELAFYQSNRVMTVSFHKYTGDFFPGTGKLDDNGSGPGKHYCLNVPLQDGIDDEMYLTIFK 277

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           T+I  +V  + P AIVLQCGADSL  DRLG FNLSI  H ECV FV+K+N+PLLV GGGG
Sbjct: 278 TVIDDIVTAFRPSAIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKYNVPLLVVGGGG 337

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFK 352
           YT +NV+RCWT ET +L+  E+P+E+P   Y  +FA       P  + ++ N +   S K
Sbjct: 338 YTIKNVSRCWTYETSVLVGAEIPDELPRTVYDAFFADSHWKLHPPLTGKVDNQNTPASLK 397

Query: 353 EIDKFI 358
            I   I
Sbjct: 398 RITMSI 403


>gi|367003886|ref|XP_003686676.1| hypothetical protein TPHA_0H00320 [Tetrapisispora phaffii CBS 4417]
 gi|357524978|emb|CCE64242.1| hypothetical protein TPHA_0H00320 [Tetrapisispora phaffii CBS 4417]
          Length = 450

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/337 (55%), Positives = 248/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY Y+  V + ++G  HPMKP R  +T HLV SY LH  M++Y   +A   EL QFHS
Sbjct: 28  RVSYHYNPKVSNYHYGVKHPMKPFRFMLTDHLVSSYGLHNIMDLYETREATKEELLQFHS 87

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYVEFL +++PD    + R    KYN+G+DCP+F+N++E+C++YAG ++DA+R+L N  
Sbjct: 88  EDYVEFLSKVSPDNISKMPRGTFDKYNIGDDCPIFQNIYEYCKLYAGASLDASRKLINDQ 147

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL  L LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 148 SDIAINWSGGLHHAKKSNPSGFCYVNDIVLATLNLLRYHPRVLYIDIDLHHGDGVQEAFY 207

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTG+  EIG  EGK +A+NVPL DGIDD S+  LFK+++  
Sbjct: 208 TTDRVFTVSFHKYNGEFFPGTGNYDEIGCAEGKHFAMNVPLNDGIDDDSYINLFKSVMEP 267

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ ++ P AI+ QCGADSL  DRLGCFNL+I  H ECV+F++ F +P++V GGGGYT  N
Sbjct: 268 IITSFKPTAIIQQCGADSLGHDRLGCFNLNIKAHGECVKFIRSFGIPMVVVGGGGYTPRN 327

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R +  ETGIL +  L +E+PE+  +   F P+ SL
Sbjct: 328 VSRLYAYETGILNNVLLQSELPEDMPFRNQFGPDYSL 364


>gi|157813964|gb|ABV81727.1| putative histone deacetylase 1 [Podura aquatica]
          Length = 283

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/284 (67%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DYV FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYVRFLRSIRPDNMAEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN +  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKEAAEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD SF  +F  I+ KV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDASFESIFNPIVGKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 TGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|262301891|gb|ACY43538.1| histone deacetylase [Limnadia lenticularis]
          Length = 283

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/284 (67%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQATEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEHIFVPIMSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|190347190|gb|EDK39423.2| hypothetical protein PGUG_03521 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 452

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/374 (52%), Positives = 264/374 (70%), Gaps = 10/374 (2%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           +  +SY ++ +V   +FGP HPMKP RL +T HLV+SY L++KM++Y P +A   EL +F
Sbjct: 30  QSNVSYHFNPEVSQYHFGPYHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKEELLEF 89

Query: 64  HSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           HS DY++FL ++TP+T   L    L  +N+G+DCPVF+ ++++  IYAG T+DA+R+L +
Sbjct: 90  HSDDYIDFLAKVTPETVTKLPESTLAHFNIGDDCPVFDGMYDYSTIYAGATLDASRKLIS 149

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            + DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+EA
Sbjct: 150 GMSDIAINWSGGLHHAKKYEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQEA 209

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+   FFPGTG + E G  +GK +AINVPLKDGIDD S+ RLFK+I+
Sbjct: 210 FYATDRVMTVSFHKYNGEFFPGTGSIDERGMDKGKNFAINVPLKDGIDDESYVRLFKSIM 269

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT 
Sbjct: 270 EPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIKAHGECVKFIKSFEIPMLVLGGGGYTP 329

Query: 303 ENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL------RIPNGHIVCSFKEID 355
            NV+R W  ET +L D  L ++IP       +F P+ SL      RI N +     + + 
Sbjct: 330 RNVSRLWCYETSVLTDVTLNHKIPNYLPSYDWFGPDFSLHPQLDGRIDNKNSKKYLESVK 389

Query: 356 KFILFNKQILYFIF 369
           + IL  +Q+ Y  +
Sbjct: 390 QDIL--EQLRYLAY 401


>gi|444319162|ref|XP_004180238.1| hypothetical protein TBLA_0D02140 [Tetrapisispora blattae CBS 6284]
 gi|387513280|emb|CCH60719.1| hypothetical protein TBLA_0D02140 [Tetrapisispora blattae CBS 6284]
          Length = 456

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/340 (57%), Positives = 246/340 (72%), Gaps = 8/340 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V S +FG  HPMKP RL +T HLV  Y LHK M++Y   KA   EL +FH+
Sbjct: 29  RVSYHFNPKVSSYHFGVRHPMKPFRLMLTDHLVSGYGLHKIMDLYETRKASDDELLEFHT 88

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY+ FL ++ PD    + R  L K+N+G+DCP+F NL+E+  +Y G ++DA+R+L N  
Sbjct: 89  DDYINFLKKVNPDNVNKMPRGTLDKFNIGDDCPIFHNLYEYSSLYTGASLDASRKLLNGQ 148

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCYIND+VL IL LL++H RVLYIDID+HHGDGV+EAFY
Sbjct: 149 SDIAINWSGGLHHAKKTSPSGFCYINDIVLSILNLLRFHPRVLYIDIDLHHGDGVQEAFY 208

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTG+  E G   GK +A+NVPLKDGIDD S+  LFK+II  
Sbjct: 209 TTDRVYTVSFHKYNGEFFPGTGNYDETGCSNGKHFALNVPLKDGIDDDSYINLFKSIIDP 268

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ +Y P  I+ QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+LV GGGGYT +N
Sbjct: 269 LITSYNPTVIIQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGIPMLVVGGGGYTPKN 328

Query: 305 VARCWTVETGI----LLDTELPNEIPENEYIKYFAPECSL 340
           V+R WT ETGI    LL  ELP++IP   ++ YF  E SL
Sbjct: 329 VSRLWTYETGILNNVLLSPELPSDIP---FLNYFDDEYSL 365


>gi|262301931|gb|ACY43558.1| histone deacetylase [Scolopendra polymorpha]
          Length = 283

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 238/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I+SKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFVPIVSKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|392567752|gb|EIW60927.1| hypothetical protein TRAVEDRAFT_166025 [Trametes versicolor
           FP-101664 SS1]
          Length = 588

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/362 (53%), Positives = 254/362 (70%), Gaps = 10/362 (2%)

Query: 3   SKDKISYFYDGDVGSVYFG--PNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVE 59
           S+  +SY++   VG+ ++G   +HPMKPHRL +T+ LVL Y L K++  IY P  A   E
Sbjct: 38  SRPIVSYYFPKGVGAQHYGVREHHPMKPHRLTLTNALVLGYGLDKQIHNIYNPRPATQTE 97

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           L  +H  DY+EFL R+TP  Q+  +Q +  +N  EDCP+F ++++FC++YAG ++ AAR+
Sbjct: 98  LEAYHDHDYIEFLSRVTPHNQNDMKQMIDSFNCVEDCPIFSDMYDFCKMYAGASLAAARK 157

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           L     DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL++H RVLYIDID+HHGDGV
Sbjct: 158 LCAGTTDIAINWSGGLHHAKKAEASGFCYVNDIVLAILELLRFHPRVLYIDIDIHHGDGV 217

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           E AFY T+RVMTVSFHK+   FFPGTG + + G   GK + +NVPLKDGIDD  +   FK
Sbjct: 218 EFAFYHTNRVMTVSFHKYTGDFFPGTGKLDDNGTGPGKHFCLNVPLKDGIDDDMYLATFK 277

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           T+I   V ++ P AIVLQCGADSL  DRLG FNLSI  H ECV FV+KFN+PLLV GGGG
Sbjct: 278 TVIEDTVASFRPTAIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKFNVPLLVLGGGG 337

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFK 352
           YT +NV+RCWT ET +L+   +P+E+P   Y  +F        P  + R+ N +   S +
Sbjct: 338 YTIKNVSRCWTYETSVLVGAAIPDELPVTMYDSFFRETKWKLHPPLTGRVENQNTAASLQ 397

Query: 353 EI 354
            I
Sbjct: 398 RI 399


>gi|157813960|gb|ABV81725.1| putative histone deacetylase 1 [Nebalia hessleri]
          Length = 283

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/284 (68%), Positives = 241/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPH+A   E+ +FHS DY+ FL  I PD  + +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHRATQDEMTKFHSDDYIRFLRSIRPDNMNEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ K+N+GEDCPVF+ L+EFCQ+ +GG+I  A +LN Q CDIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQKFNVGEDCPVFDGLYEFCQLSSGGSIAGAVKLNKQACDIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I++KV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFIPIMTKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL+I GHA+CV FVKK+NLPLLV GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTIKGHAKCVEFVKKYNLPLLVLGGGGYTIRNVAR 283


>gi|262301847|gb|ACY43516.1| histone deacetylase [Nymphon unguiculatum-charcoti complex sp.
           SEM-1997]
          Length = 283

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMTEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVAGAVKLNKQATEIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDR+MTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRLMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+YA+N PL+DGIDD S+ ++F+ +ISKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYAVNFPLRDGIDDDSYEKIFQPVISKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|167376623|ref|XP_001734073.1| histone deacetylase Rpd3 [Entamoeba dispar SAW760]
 gi|165904583|gb|EDR29792.1| histone deacetylase Rpd3, putative [Entamoeba dispar SAW760]
          Length = 448

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 184/339 (54%), Positives = 248/339 (73%), Gaps = 2/339 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YFYD +VG   +G  HPMKP R  + HHL++ Y ++K++ IY+P +A   ++  FHS
Sbjct: 3   RVCYFYDQNVGEFDYGFGHPMKPLRNKLVHHLIMEYGIYKRLNIYKPWRATNEQMEMFHS 62

Query: 66  ADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            +Y++FL R+TP+   Q  F++ L ++N  +DCPVFE L+ F Q   G ++  A ++N +
Sbjct: 63  KEYIDFLQRVTPEMALQPHFKKSLEEFNFTDDCPVFEGLYPFVQTVVGSSLGCAMKINER 122

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NW+GGLHHAKK +ASGFCYIND+V  ILELLK H+RVLYIDID HHGDGVEEAF
Sbjct: 123 AADICVNWSGGLHHAKKSQASGFCYINDIVCAILELLKVHSRVLYIDIDHHHGDGVEEAF 182

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             T+RVMT S HK+GD +FPGTGDV EIG  EGK Y+INVPLKDGI+D  + RLF  II 
Sbjct: 183 KATNRVMTFSLHKYGDNYFPGTGDVDEIGIDEGKNYSINVPLKDGINDEGYHRLFYPIID 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +++E + P  +V+QCGADSL GDRLG FNLSI GH +C+++VKKF LP+++ GGGGYT  
Sbjct: 243 RIMEVFQPSVVVMQCGADSLNGDRLGFFNLSIQGHCDCMKYVKKFGLPMILVGGGGYTVS 302

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           N ARCW  ET    D  +P++IP N+Y++Y+ P+  + I
Sbjct: 303 NTARCWCYETAAACDLNIPDQIPINDYLEYYVPDMKITI 341


>gi|157813972|gb|ABV81731.1| putative histone deacetylase 1 [Tanystylum orbiculare]
          Length = 283

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/284 (66%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVAGAVKLNKQATEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDR+MTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRLMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+YA+N PL+DGIDD S+ ++F+ +ISKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYAVNFPLRDGIDDDSYEKIFQPVISKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|392576014|gb|EIW69146.1| hypothetical protein TREMEDRAFT_68989 [Tremella mesenterica DSM
           1558]
          Length = 434

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/347 (57%), Positives = 254/347 (73%), Gaps = 6/347 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K+SY++   VG  ++G  HPM+P RL +T  L L+Y LH++M I+ P  A   E+  
Sbjct: 35  SLPKVSYYHPKGVGEYHYGDRHPMRPFRLELTTQLALAYSLHERMTIHSPRLATSEEMTM 94

Query: 63  FHSADYVEFLHRITPDTQ------HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDA 116
           +HS DYV+FL R+ P ++      +L      KYN+G DCPVF ++FEFCQ Y GG++ A
Sbjct: 95  YHSEDYVDFLQRVLPASKSAIKLKNLLEYGEKKYNVGNDCPVFSDVFEFCQKYTGGSLAA 154

Query: 117 ARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHG 176
           A+RL ++  DIAINW+GGLHHAKK EASGFC+IND+VL ILELL+ H RVLYIDID+HHG
Sbjct: 155 AKRLVSEGTDIAINWSGGLHHAKKGEASGFCFINDIVLAILELLRVHPRVLYIDIDIHHG 214

Query: 177 DGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR 236
           DGV++AFY +DRV+TVSFHK+G LFFPGTG + E G ++GK +AINVPLKDGIDD S+  
Sbjct: 215 DGVQDAFYLSDRVLTVSFHKYGGLFFPGTGGLSETGAKDGKNFAINVPLKDGIDDESYIS 274

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LFK II   +  + P AIVLQCGADSL  DRLG FNLSI  H ECVRFVK F LPLLV G
Sbjct: 275 LFKNIIEPTISRFRPSAIVLQCGADSLGADRLGTFNLSIAAHGECVRFVKSFGLPLLVLG 334

Query: 297 GGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           GGGY   +VARCW  ETGIL   ++P+++P  +Y +Y+AP+ SL  P
Sbjct: 335 GGGYRISSVARCWAYETGILTGVKMPDQLPRTKYHEYYAPDYSLHPP 381


>gi|262301831|gb|ACY43508.1| histone deacetylase [Abacion magnum]
          Length = 283

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 238/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I++KV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFVPIVTKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|262301835|gb|ACY43510.1| histone deacetylase [Argulus sp. Arg2]
          Length = 283

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/284 (67%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ +A +LN Q  DIAINW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVASAVKLNKQAADIAINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I+SKV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFVPIMSKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH +C+ FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 TGDRLGCFNLTLKGHGKCLEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|262301853|gb|ACY43519.1| histone deacetylase [Craterostigmus tasmanianus]
          Length = 283

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD SF  +F  ++SKV+E Y P A++LQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESFEHIFVPVVSKVMEMYQPSAVILQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|50310945|ref|XP_455495.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644631|emb|CAG98203.1| KLLA0F09119p [Kluyveromyces lactis]
          Length = 452

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/340 (56%), Positives = 247/340 (72%), Gaps = 8/340 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV +Y LHK M++Y    A   EL +FHS
Sbjct: 30  RVSYHFNSKVSQYHYGVKHPMKPFRLMLTDHLVSAYGLHKVMDLYETRSATKDELTKFHS 89

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL ++TPDT   L R  L K+N+G+DCP+F+ +F++  +YAG ++DA+R+L N  
Sbjct: 90  EDYVNFLAKVTPDTLNKLPRGSLEKFNIGDDCPIFQGMFDYAALYAGASLDASRKLLNGQ 149

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK   SGFCY+ND+VL I+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 150 SEIAINWSGGLHHAKKNNPSGFCYVNDIVLAIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 209

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTGD+ EIG   GK +A+NVPL+DGI+D S+  LFK+II  
Sbjct: 210 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSRGKHFALNVPLQDGIEDDSYINLFKSIIDP 269

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           V+ ++ P  I+ QCGADSL  DRLGCFNL+I  H ECVRFVK F +P+LV GGGGYT  N
Sbjct: 270 VITSFRPSVIIQQCGADSLGHDRLGCFNLNIKAHGECVRFVKSFGVPMLVVGGGGYTPRN 329

Query: 305 VARCWTVET----GILLDTELPNEIPENEYIKYFAPECSL 340
           V+R WT ET    G+LL  +LP  IP   +  +F P+ SL
Sbjct: 330 VSRLWTYETGLLNGVLLQPKLPEGIP---FRDWFGPDYSL 366


>gi|67468454|ref|XP_650263.1| histone deacetylase [Entamoeba histolytica HM-1:IMSS]
 gi|54306306|gb|AAV33348.1| histone deacetylase 1 [Entamoeba histolytica]
 gi|56466860|gb|EAL44877.1| histone deacetylase, putative [Entamoeba histolytica HM-1:IMSS]
 gi|407043680|gb|EKE42084.1| histone deacetylase, putative [Entamoeba nuttalli P19]
 gi|449709995|gb|EMD49150.1| histone deacetylase Rpd3, putative [Entamoeba histolytica KU27]
          Length = 448

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 183/339 (53%), Positives = 248/339 (73%), Gaps = 2/339 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++ YFYD +VG   +G  HPMKP R  + HHL++ Y ++K++ IY+P +A   ++  FHS
Sbjct: 3   RVCYFYDQNVGEFDYGFGHPMKPLRNKLVHHLIMEYGIYKRLNIYKPWRATNEQMEMFHS 62

Query: 66  ADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            +Y++FL R+TP+   Q  F++ L ++N  +DCPVFE L+ F Q   G ++  A ++N +
Sbjct: 63  KEYIDFLQRVTPEMALQPHFKKSLEEFNFTDDCPVFEGLYPFVQTVVGSSLGCAMKINER 122

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DI +NW+GGLHHAKK +ASGFCYIND+V  ILELLK H+RVLYIDID HHGDGVEEAF
Sbjct: 123 AADICVNWSGGLHHAKKSQASGFCYINDIVCAILELLKVHSRVLYIDIDHHHGDGVEEAF 182

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             T+RVMT S HK+GD +FPGTGDV E+G  EGK Y+INVPLKDGI+D  + RLF  II 
Sbjct: 183 KATNRVMTFSLHKYGDNYFPGTGDVDEVGIDEGKNYSINVPLKDGINDEGYHRLFYPIID 242

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +++E + P  +V+QCGADSL GDRLG FNLSI GH +C+++VKKF LP+++ GGGGYT  
Sbjct: 243 RIMEVFQPSVVVMQCGADSLNGDRLGFFNLSIQGHCDCMKYVKKFGLPMILVGGGGYTVS 302

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           N ARCW  ET    D  +P++IP N+Y++Y+ P+  + I
Sbjct: 303 NTARCWCYETAAACDLNIPDQIPINDYLEYYVPDMKITI 341


>gi|262301857|gb|ACY43521.1| histone deacetylase [Daphnia magna]
          Length = 283

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/284 (67%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMTEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQATEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFVPIMSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVDFVKKHNLPLLLLGGGGYTIRNVAR 283


>gi|11065949|gb|AAG28403.1|AF193434_1 putative histone deacetylase [Cryptosporidium parvum]
          Length = 437

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/343 (55%), Positives = 249/343 (72%), Gaps = 2/343 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +K KI+YFYD +VG+ ++G  HPMKPHR+ MTH LV  Y L +K+++  P       L
Sbjct: 1   MGAKKKIAYFYDEEVGNFHYGLGHPMKPHRVRMTHDLVSQYGLLEKVDVMVPTPGTVESL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV+FL  +  D  H +   L ++N+GEDCPVF+ L+EFCQ+ AGG++  A+ +
Sbjct: 61  TRFHSNDYVDFLRSVNTDNMHDYSDHLARFNVGEDCPVFDGLWEFCQLSAGGSLGGAQSV 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N      AINWAGGLHH KK EASGFCY+ND VLG LE LKY  RV Y+DID+HHGDGVE
Sbjct: 121 NELGYQYAINWAGGLHHGKKHEASGFCYVNDCVLGALEFLKYQHRVCYVDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY + R M VSFHK+GD +FPGTG + ++G  EG  Y++NVPLKDG+DD +F  LF  
Sbjct: 181 EAFYTSPRCMCVSFHKYGD-YFPGTGALNDVGVEEGLGYSVNVPLKDGVDDATFIDLFTK 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +++ V+E Y PGAIVLQCGADSL+GDRLGCFNLS+ GH   V F+KKFN+PLL+ GGGGY
Sbjct: 240 VMTLVMENYRPGAIVLQCGADSLSGDRLGCFNLSLKGHGHAVSFLKKFNVPLLILGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSLRI 342
           T  NV +CWT ET +++DT +  ++P  + +  Y+ P+ SL +
Sbjct: 300 TLRNVPKCWTYETSLIVDTYIDEQLPNSSNFYGYYGPDFSLAV 342


>gi|262301827|gb|ACY43506.1| histone deacetylase [Achelia echinata]
          Length = 283

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/284 (65%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ F+  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFIRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVAGAVKLNKQATEIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDR+MTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRLMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+YA+N PL+DGIDD S+ ++F+ +ISKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYAVNFPLRDGIDDESYEKIFQPVISKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVK++NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKRYNLPLLLLGGGGYTIRNVAR 283


>gi|66475386|ref|XP_627509.1| histone deacetylase  [Cryptosporidium parvum Iowa II]
 gi|46229275|gb|EAK90124.1| histone deacetylase HDA2/Rpd3p [Cryptosporidium parvum Iowa II]
          Length = 440

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/343 (55%), Positives = 249/343 (72%), Gaps = 2/343 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +K KI+YFYD +VG+ ++G  HPMKPHR+ MTH LV  Y L +K+++  P       L
Sbjct: 9   MGAKKKIAYFYDEEVGNFHYGLGHPMKPHRVRMTHDLVSQYGLLEKVDVMVPTPGTVESL 68

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV+FL  +  D  H +   L ++N+GEDCPVF+ L+EFCQ+ AGG++  A+ +
Sbjct: 69  TRFHSNDYVDFLRSVNTDNMHDYSDHLARFNVGEDCPVFDGLWEFCQLSAGGSLGGAQSV 128

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N      AINWAGGLHH KK EASGFCY+ND VLG LE LKY  RV Y+DID+HHGDGVE
Sbjct: 129 NELGYQYAINWAGGLHHGKKHEASGFCYVNDCVLGALEFLKYQHRVCYVDIDIHHGDGVE 188

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY + R M VSFHK+GD +FPGTG + ++G  EG  Y++NVPLKDG+DD +F  LF  
Sbjct: 189 EAFYTSPRCMCVSFHKYGD-YFPGTGALNDVGVEEGLGYSVNVPLKDGVDDATFIDLFTK 247

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +++ V+E Y PGAIVLQCGADSL+GDRLGCFNLS+ GH   V F+KKFN+PLL+ GGGGY
Sbjct: 248 VMTLVMENYRPGAIVLQCGADSLSGDRLGCFNLSLKGHGHAVSFLKKFNVPLLILGGGGY 307

Query: 301 TKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSLRI 342
           T  NV +CWT ET +++DT +  ++P  + +  Y+ P+ SL +
Sbjct: 308 TLRNVPKCWTYETSLIVDTYIDEQLPNSSNFYGYYGPDFSLAV 350


>gi|67623773|ref|XP_668169.1| histone deacetylase [Cryptosporidium hominis TU502]
 gi|32398722|emb|CAD98682.1| putative histone deacetylase [Cryptosporidium parvum]
 gi|54659349|gb|EAL37930.1| histone deacetylase [Cryptosporidium hominis]
          Length = 432

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/343 (55%), Positives = 249/343 (72%), Gaps = 2/343 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +K KI+YFYD +VG+ ++G  HPMKPHR+ MTH LV  Y L +K+++  P       L
Sbjct: 1   MGAKKKIAYFYDEEVGNFHYGLGHPMKPHRVRMTHDLVSQYGLLEKVDVMVPTPGTVESL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV+FL  +  D  H +   L ++N+GEDCPVF+ L+EFCQ+ AGG++  A+ +
Sbjct: 61  TRFHSNDYVDFLRSVNTDNMHDYSDHLARFNVGEDCPVFDGLWEFCQLSAGGSLGGAQSV 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N      AINWAGGLHH KK EASGFCY+ND VLG LE LKY  RV Y+DID+HHGDGVE
Sbjct: 121 NELGYQYAINWAGGLHHGKKHEASGFCYVNDCVLGALEFLKYQHRVCYVDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY + R M VSFHK+GD +FPGTG + ++G  EG  Y++NVPLKDG+DD +F  LF  
Sbjct: 181 EAFYTSPRCMCVSFHKYGD-YFPGTGALNDVGVEEGLGYSVNVPLKDGVDDATFIDLFTK 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +++ V+E Y PGAIVLQCGADSL+GDRLGCFNLS+ GH   V F+KKFN+PLL+ GGGGY
Sbjct: 240 VMTLVMENYRPGAIVLQCGADSLSGDRLGCFNLSLKGHGHAVSFLKKFNVPLLILGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSLRI 342
           T  NV +CWT ET +++DT +  ++P  + +  Y+ P+ SL +
Sbjct: 300 TLRNVPKCWTYETSLIVDTYIDEQLPNSSNFYGYYGPDFSLAV 342


>gi|157813958|gb|ABV81724.1| putative histone deacetylase 1 [Narceus americanus]
          Length = 283

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/284 (66%), Positives = 238/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGI+D S+ ++F+ I++KV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIEDDSYEQIFQPIVTKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+C  FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCAEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|50284967|ref|XP_444912.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524214|emb|CAG57805.1| unnamed protein product [Candida glabrata]
          Length = 450

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/337 (56%), Positives = 246/337 (72%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY  + +V   ++G  HPMKP RL +T HLV  Y LHK M++Y+  KA   E+ +FHS
Sbjct: 27  RVSYHINPEVSHYHYGVRHPMKPFRLMLTDHLVSGYGLHKIMDLYKTRKATAEEMEEFHS 86

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL ++TP+    L R  L K+N+G+DCP+F N+F++  +Y G ++DA+R+L N  
Sbjct: 87  EDYVNFLSKVTPENLSKLPRGTLEKFNIGDDCPIFPNIFQYSSLYTGASLDASRKLINNQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCYIND+VL IL LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYINDIVLAILNLLRYHPRVLYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTG   E G  +GK +A+NVPL+DGIDD S+  LFK+II  
Sbjct: 207 TTDRVYTISFHKYNGEFFPGTGKNDETGCADGKHFAMNVPLEDGIDDDSYINLFKSIIDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ T+ P  I+ QCGADSL  DRLGCFNL+I  H ECV+FV+ F +P+LV GGGGYT  N
Sbjct: 267 LITTFKPTVILQQCGADSLGHDRLGCFNLNIKAHGECVKFVRSFGIPMLVVGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL +  LP E+P+N  + + F P+ SL
Sbjct: 327 VSRLWTYETGILNNVLLPEELPDNLPFKESFGPDYSL 363


>gi|269994398|dbj|BAI50363.1| histone deacetylase 3 [Leiolepis reevesii rubritaeniata]
          Length = 309

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 182/279 (65%), Positives = 225/279 (80%)

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +FHS DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LN
Sbjct: 1   RFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLN 60

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N++CDIAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+E
Sbjct: 61  NKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQE 120

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +
Sbjct: 121 AFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPV 180

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I++VVE Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT
Sbjct: 181 INQVVEFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYT 240

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
             NVARCWT ET +L+D  +  E+P +EY +YFAP+ +L
Sbjct: 241 VRNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTL 279


>gi|363749361|ref|XP_003644898.1| hypothetical protein Ecym_2346 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888531|gb|AET38081.1| Hypothetical protein Ecym_2346 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 485

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/337 (55%), Positives = 248/337 (73%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV  Y LHK M++Y   +A   EL +FH+
Sbjct: 63  QVSYHFNPKVSQYHYGVRHPMKPFRLMLTDHLVSCYGLHKIMDLYETREATKEELLEFHA 122

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY+EFL  +TP+    L R  L K+N+G+DCP+F+ +F++  +YAG ++DAAR+L N  
Sbjct: 123 PDYIEFLSHVTPENLNKLPRGSLEKFNIGDDCPIFQGMFDYSILYAGASLDAARKLINNQ 182

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK   SGFCY+ND+VL I+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 183 SEIAINWSGGLHHAKKSNPSGFCYVNDIVLAIISLLRYHPRVLYIDIDLHHGDGVQEAFY 242

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTGD+ EIG  +GK +++NVPL+DGIDD S+  LFK+II  
Sbjct: 243 TTDRVFTVSFHKYNGEFFPGTGDLDEIGCSKGKKFSLNVPLQDGIDDDSYINLFKSIIDP 302

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           +V +Y P  I+ QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+L  GGGGYT  N
Sbjct: 303 LVTSYKPTVIIQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGIPILCVGGGGYTPRN 362

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R W  ETG+L D  LP++IP++  +  +F P+ SL
Sbjct: 363 VSRLWAYETGVLNDVLLPSDIPKDIPFTDWFGPDYSL 399


>gi|262301915|gb|ACY43550.1| histone deacetylase [Peripatus sp. 'Pep']
          Length = 283

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 185/284 (65%), Positives = 238/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMT SFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTASFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ I+SKV+E Y P A++LQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEHIFQPIVSKVMEMYQPSAVILQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLP+L+ GGGGYT  +VAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVDFVKKYNLPMLLLGGGGYTIRSVAR 283


>gi|405124228|gb|AFR98990.1| histone deacetylase phd1 [Cryptococcus neoformans var. grubii H99]
          Length = 454

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/320 (60%), Positives = 245/320 (76%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPM+PHRL +T+ LVLSY LH+KM  + P  A   EL +FH ADYV+FL R+TP      
Sbjct: 35  HPMRPHRLELTNQLVLSYGLHEKMSYHAPRAATEEELLEFHEADYVDFLKRVTPKNAQAL 94

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            ++ TK+N+G+DCP+F +LF FC+ YAGG++ AAR+L++   DIAINW+GGLHHAKK EA
Sbjct: 95  TKDWTKFNVGDDCPIFYDLFSFCKQYAGGSLAAARKLSSGSADIAINWSGGLHHAKKGEA 154

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELL+YH RVLYIDID+HHGDGV+EAFY ++RV+TVSFHK+   FFP
Sbjct: 155 SGFCYVNDIVLGILELLRYHPRVLYIDIDIHHGDGVQEAFYLSNRVLTVSFHKYAADFFP 214

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
            TG++ EIG   GK++ +NVPL+DGIDD S+  LFK ++   +  + P AIVLQCGADSL
Sbjct: 215 NTGNLSEIGSDLGKYFCLNVPLQDGIDDESYISLFKAVMEPTITIFKPSAIVLQCGADSL 274

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 323
             DRLG FNLSI  H ECVRF+K F LPLL  GGGGY + +V+RCWT ETG+L   +L N
Sbjct: 275 GCDRLGTFNLSIAAHGECVRFIKSFGLPLLALGGGGYRQSSVSRCWTYETGVLAGVQLSN 334

Query: 324 EIPENEYIKYFAPECSLRIP 343
           E+P+N Y ++FAP+  L  P
Sbjct: 335 ELPQNNYYEFFAPDYKLHPP 354


>gi|339254540|ref|XP_003372493.1| putative histone deacetylase family protein [Trichinella spiralis]
 gi|316967078|gb|EFV51568.1| putative histone deacetylase family protein [Trichinella spiralis]
          Length = 441

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 184/371 (49%), Positives = 266/371 (71%), Gaps = 9/371 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ +++Y+YD ++G  ++G  HPM+P R+ +TH+L+ SY L+++M+IYRP +A   ++ Q
Sbjct: 4   SRKRVAYYYDAEIGCYHYGRGHPMRPFRITLTHNLICSYGLNERMKIYRPLRATADQMKQ 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+EFL       + +F + + +YN+G+DCP+F  +F FCQI AGG++  A+++ +
Sbjct: 64  FHSDDYIEFLKSKDGMEELIFTKSMHRYNVGDDCPLFNGMFSFCQISAGGSLACAQKITS 123

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DI INW GGLHHA+  EASGFCY+ND+VL IL LL+Y+ RVLYIDID HHGDGVEEA
Sbjct: 124 EEADIVINWGGGLHHARSREASGFCYVNDIVLAILHLLEYYQRVLYIDIDCHHGDGVEEA 183

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RV+T+SFHKFG+ FFPG+GD+ +IG  EG++YA+NVPL+DGI D  + +LF+ I+
Sbjct: 184 FYATNRVLTMSFHKFGE-FFPGSGDINDIGADEGRYYAVNVPLRDGITDEYYQQLFEPIV 242

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECVRFVKKFNLPLLVTGGGG 299
              V+ + P  IV+QCG+DSL+GDRLG  NL+  G   H  CV +V+  N+PL++ GGGG
Sbjct: 243 HMAVQYFQPNVIVMQCGSDSLSGDRLGVLNLTAKGIARHGNCVEYVRSLNIPLMLVGGGG 302

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL-----RIPNGHIVCSFKEI 354
           YT +NVARCWT ET + +  EL N +P +EYI ++AP+  L      I N +     +E 
Sbjct: 303 YTIKNVARCWTYETALAIGAELDNNLPVHEYIGFYAPDFLLHFAPTNIENRNTSTYLEET 362

Query: 355 DKFILFNKQIL 365
              IL N +++
Sbjct: 363 RNTILRNLRLM 373


>gi|262301917|gb|ACY43551.1| histone deacetylase [Polyzonium germanicum]
          Length = 283

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/284 (66%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I++KV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIFVPIVTKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+C  FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCAEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|150863843|ref|XP_001382456.2| hypothetical protein PICST_75957 [Scheffersomyces stipitis CBS
           6054]
 gi|149385099|gb|ABN64427.2| histone deacetylase [Scheffersomyces stipitis CBS 6054]
          Length = 453

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/339 (56%), Positives = 249/339 (73%), Gaps = 6/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +SY Y+ +V   ++G  HPMKP RL +T HLV+SY L++KM+++ P +A   EL  FHS
Sbjct: 35  NVSYHYNPEVSQYHYGALHPMKPFRLMLTDHLVISYKLYEKMDLFTPRRATKEELLAFHS 94

Query: 66  ADYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY+ FL  ITP+ T  L  Q L ++N+G+DCPVF+ ++++  IYAG ++DA+R+L + +
Sbjct: 95  EDYINFLQTITPEKTAKLPDQTLAQFNIGDDCPVFDGMYDYSAIYAGASLDASRKLISGM 154

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+EAFY
Sbjct: 155 SDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIMNLLRVHPRVMYIDIDLHHGDGVQEAFY 214

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRVMTVSFHK+   FFPGTG V E G  +GK YAINVPL+DGIDD S+ RLFK+I+  
Sbjct: 215 TTDRVMTVSFHKYNGEFFPGTGSVDETGLGKGKNYAINVPLRDGIDDESYIRLFKSIMEP 274

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F LP+LV GGGGYT  N
Sbjct: 275 LISKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGLPMLVLGGGGYTPRN 334

Query: 305 VARCWTVETGILLDTELPNEIPENEYI---KYFAPECSL 340
           V+R W  ET +L D  L ++IP   Y+    +F P+ SL
Sbjct: 335 VSRLWCYETSVLNDVTLNHKIP--NYLPTYDWFGPDFSL 371


>gi|209878552|ref|XP_002140717.1| histone deacetylase hda2/rpd3p [Cryptosporidium muris RN66]
 gi|209556323|gb|EEA06368.1| histone deacetylase hda2/rpd3p, putative [Cryptosporidium muris
           RN66]
          Length = 432

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 194/361 (53%), Positives = 254/361 (70%), Gaps = 4/361 (1%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M  K +I+YFYD +VG+ ++G  HPMKPHR+ MTH LV  Y L +K+++  P       L
Sbjct: 1   MGGKTRIAYFYDEEVGNFHYGLGHPMKPHRVRMTHDLVTQYGLTEKLDVMIPTPGTRESL 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FHS DYV+FL  +  D  H +   L ++N+GEDCPVF+ L+EFCQ+ AGG++  A+ +
Sbjct: 61  TRFHSNDYVDFLRTVNTDNMHDYSDHLARFNVGEDCPVFDGLWEFCQLSAGGSLGGAQSV 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N    D AINWAGGLHH KK EASGFCY+ND VLG LE LKY  RV YIDID+HHGDGVE
Sbjct: 121 NELGYDYAINWAGGLHHGKKHEASGFCYVNDCVLGALEFLKYQHRVCYIDIDIHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY + R M VSFHK+GD +FPGTG + ++G  EG  Y++NVPLKDG+DD +F  LF  
Sbjct: 181 EAFYTSPRCMCVSFHKYGD-YFPGTGAINDVGVEEGLGYSVNVPLKDGVDDATFIDLFTK 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +++ V+E Y PGAIVLQCGADSL+GDRLGCFNLS+ GH   V F+KKF +P+L+ GGGGY
Sbjct: 240 VMTLVMEKYRPGAIVLQCGADSLSGDRLGCFNLSLKGHGYAVSFLKKFKIPMLILGGGGY 299

Query: 301 TKENVARCWTVETGILLDTELPNEIPE-NEYIKYFAPECSL--RIPNGHIVCSFKEIDKF 357
           T  NV +CW  ET +++DT +  ++P  + +  Y+ P+ SL  R  N   + S K+ D  
Sbjct: 300 TLRNVPKCWAYETSLIVDTYIDEQLPNASNFYGYYGPDFSLAVRTSNMENLNSKKDCDNI 359

Query: 358 I 358
           I
Sbjct: 360 I 360


>gi|255714957|ref|XP_002553760.1| KLTH0E06446p [Lachancea thermotolerans]
 gi|238935142|emb|CAR23323.1| KLTH0E06446p [Lachancea thermotolerans CBS 6340]
          Length = 449

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/337 (55%), Positives = 245/337 (72%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +SY ++ DV   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL +FH+
Sbjct: 27  NVSYHFNSDVSQFHYGVRHPMKPFRLMLTDHLVSSYGLHKIMDLYETRPATREELCEFHA 86

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYVEFL +++PD    L R  L K+N+G+DCP+F+ L+++  +YAG ++DA R+L N  
Sbjct: 87  DDYVEFLAKVSPDNLSKLPRGTLEKFNIGDDCPIFQGLYQYSTLYAGASLDATRKLINGQ 146

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK   SGFCY+ND+VL +L LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 147 SEIAINWSGGLHHAKKSSPSGFCYVNDIVLSVLNLLRYHPRVLYIDIDLHHGDGVQEAFY 206

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTG++ E G   GK +A+NVPL+DGIDD S+  LFK+II  
Sbjct: 207 TTDRVFTVSFHKYNGEFFPGTGNLDETGCSRGKHFALNVPLEDGIDDDSYINLFKSIIDP 266

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ ++ P  I+ QCGADSL  DRLGCFNL++  H ECVRFVK F +P+LV GGGGYT  N
Sbjct: 267 LITSFKPTVIIQQCGADSLGHDRLGCFNLNVKAHGECVRFVKSFGIPMLVLGGGGYTPRN 326

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ET +L    +P EIPE+  +  +F P+ +L
Sbjct: 327 VSRLWTYETALLNGVSVPQEIPEDIPFRDWFGPDYTL 363


>gi|307107149|gb|EFN55393.1| hypothetical protein CHLNCDRAFT_8472, partial [Chlorella
           variabilis]
          Length = 383

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/333 (58%), Positives = 249/333 (74%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K+++SYFYD D+G  ++G  HPMKPHR+ MT+ LVL Y LH K+E Y P +A   ++  F
Sbjct: 1   KNRVSYFYDPDIGQFFYGQGHPMKPHRVRMTNSLVLHYGLHSKLEYYTPTRARAEDMKAF 60

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+ DYV+FL  I PD    F +EL +YN+ EDCPVF  L+E+CQI AGG++ AA +LN Q
Sbjct: 61  HADDYVDFLQNINPDNLSQFTRELREYNMYEDCPVFSGLYEYCQISAGGSLGAAVKLNYQ 120

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINWAGGLHHAK+ EASGFCY ND+VL +LELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 121 TADIAINWAGGLHHAKRSEASGFCYFNDIVLAVLELLKYHQRVLYLDIDVHHGDGVEEAF 180

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             TDRVMTVSFHKFG  +FP TGD+   G+ +G  Y++NVPL+DGI D ++ +LF+ ++ 
Sbjct: 181 LTTDRVMTVSFHKFGGGYFPDTGDIHNCGQGKGLGYSLNVPLRDGITDEAYHQLFRPVML 240

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P  +VLQCG DSLAGDRLG FNLS  GHA C+ F+K F LPL++ GGGGY   
Sbjct: 241 KVMEVFQPEVVVLQCGTDSLAGDRLGVFNLSSTGHAACIDFMKGFGLPLMLLGGGGYKII 300

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAP 336
           NVARCW  ETG+ +  ++  ++P NEY  Y+ P
Sbjct: 301 NVARCWAYETGLAVGADMDEKLPPNEYYDYYGP 333


>gi|146416341|ref|XP_001484140.1| hypothetical protein PGUG_03521 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 452

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/371 (52%), Positives = 261/371 (70%), Gaps = 10/371 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY ++ +V   +FGP HPMKP RL +T HLV+SY L++KM++Y P +A   EL +FHS 
Sbjct: 33  VSYHFNPEVSQYHFGPYHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKEELLEFHSD 92

Query: 67  DYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
           DY++FL ++TP+T   L    L  +N+G+DCPVF+ ++++  IYAG T+DA R+L + + 
Sbjct: 93  DYIDFLAKVTPETVTKLPESTLAHFNIGDDCPVFDGMYDYSTIYAGATLDALRKLISGMS 152

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+EAFY 
Sbjct: 153 DIAINWSGGLHHAKKYEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQEAFYA 212

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMTVSFHK+   FFPGTG + E G  +GK +AINVPLKDGIDD S+ RLFK I+  +
Sbjct: 213 TDRVMTVSFHKYNGEFFPGTGSIDERGMDKGKNFAINVPLKDGIDDESYVRLFKLIMEPL 272

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT  NV
Sbjct: 273 ITKFQPTCIVQQCGADSLGYDRLGCFNLNIKAHGECVKFIKSFEIPMLVLGGGGYTPRNV 332

Query: 306 ARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL------RIPNGHIVCSFKEIDKFI 358
           +R W  ET +L D  L ++IP       +F P+ SL      RI N +     + + + I
Sbjct: 333 SRLWCYETSVLTDVTLNHKIPNYLPSYDWFGPDFSLHPQLDGRIDNKNSKKYLESVKQDI 392

Query: 359 LFNKQILYFIF 369
           L  +Q+ Y  +
Sbjct: 393 L--EQLRYLAY 401


>gi|321263085|ref|XP_003196261.1| histone deacetylase 1 (hd1) [Cryptococcus gattii WM276]
 gi|317462736|gb|ADV24474.1| histone deacetylase 1 (hd1), putative [Cryptococcus gattii WM276]
          Length = 622

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/387 (48%), Positives = 259/387 (66%), Gaps = 51/387 (13%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL---------------------- 43
           +++Y+YD DVG+  +   HPMKPHR+ M H+L+++Y +                      
Sbjct: 21  RVAYYYDQDVGNYNYYLGHPMKPHRIRMAHNLIVNYGMCDEEGQEHGPAEVWGEGKRMVN 80

Query: 44  ----------------------------HKKMEIYRPHKAYPVELAQFHSADYVEFLHRI 75
                                        K M++++P +A   E+ +FH+ +Y++ L  +
Sbjct: 81  DEMAQNWGGGLMGEAEMKWEKAALSGSRSKMMQVFKPRRATKEEMTRFHTDEYIDLLEAV 140

Query: 76  TPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL 135
           TP+T        T+  +GEDCP F+ LFEFC I AGG++ AA RLN    DI INWAGGL
Sbjct: 141 TPETADALTGGGTRCLIGEDCPAFDGLFEFCTISAGGSLGAAERLNAGAADIVINWAGGL 200

Query: 136 HHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 195
           HHAKK EASGFCY+ND+VLGILELL+ H RVLYID+DVHHGDGVEEAFY TDRVMT SFH
Sbjct: 201 HHAKKTEASGFCYVNDIVLGILELLRIHPRVLYIDVDVHHGDGVEEAFYVTDRVMTCSFH 260

Query: 196 KFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIV 255
           +FG+ FFPGTGDV+++G ++GK YA+NVPL+DGI D +F  +FK +I +++  + P A+V
Sbjct: 261 RFGE-FFPGTGDVRDVGMKKGKGYAVNVPLRDGITDETFQSIFKPVIDRIMSHFRPSAVV 319

Query: 256 LQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGI 315
           LQ GADS++GD+LG FNL+++GHAEC RF+K FN+P+++ GGGGYT +NVAR WT ET I
Sbjct: 320 LQMGADSISGDKLGGFNLTLEGHAECARFIKGFNVPVMMVGGGGYTVKNVARAWTKETAI 379

Query: 316 LLDTELPNEIPENEYIKYFAPECSLRI 342
           +   +LP ++P N++++Y+ P   L +
Sbjct: 380 MCGVDLPEDLPYNQFLEYYGPRYKLEV 406


>gi|448527932|ref|XP_003869617.1| Hos2 histone deacetylase [Candida orthopsilosis Co 90-125]
 gi|380353970|emb|CCG23484.1| Hos2 histone deacetylase [Candida orthopsilosis]
          Length = 414

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/325 (58%), Positives = 244/325 (75%), Gaps = 1/325 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+SY Y+ +V + ++G  HPMKP RL +T HLV +Y LH+KM++Y P KA   EL Q
Sbjct: 30  SKTKVSYHYNPEVANYHYGTLHPMKPFRLMLTDHLVSTYKLHEKMDLYTPRKATQEELLQ 89

Query: 63  FHSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY++FL  +TP+T + L  Q L K+N+G+DCPVF+ +F++  IYAG ++DA+R++ 
Sbjct: 90  FHSEDYIDFLQSVTPETVKTLSDQTLAKFNIGDDCPVFDGMFDYSSIYAGASLDASRKIL 149

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
             + DIAINW+GGLHHAKK E SGFCYIND+VL I+ LL+ H RVLY+DID+HHGDGV+E
Sbjct: 150 AGMADIAINWSGGLHHAKKFEPSGFCYINDIVLCIINLLRIHPRVLYVDIDLHHGDGVQE 209

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+   FFPGTG   E G  +GK +AINVPL+DGIDD S+  LFK+I
Sbjct: 210 AFYTTDRVMTVSFHKYDGEFFPGTGSGDEAGIGKGKNFAINVPLRDGIDDESYVALFKSI 269

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +  V+  + P  IV QCGADSL GDRLG FNLS+ GH  C+ F+K F +P++V GGGGYT
Sbjct: 270 MQVVMPKFQPSIIVAQCGADSLGGDRLGRFNLSLKGHGNCLNFLKSFGIPMVVLGGGGYT 329

Query: 302 KENVARCWTVETGILLDTELPNEIP 326
            +NV+R W  ET +L DT L  +IP
Sbjct: 330 PKNVSRLWCYETAVLTDTTLNGKIP 354


>gi|262301829|gb|ACY43507.1| histone deacetylase [Ammothea hilgendorfi]
          Length = 283

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/284 (66%), Positives = 238/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ F+  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFIRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVAGAVKLNKQATEIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDR+MTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRLMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+YA+N PL+DGIDD S+ ++F  +ISKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYAVNFPLRDGIDDDSYEKIFVPVISKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFVKKYNLPLLLLGGGGYTIRNVAR 283


>gi|170091358|ref|XP_001876901.1| histone deacetylase complex, catalytic component RPD3 [Laccaria
           bicolor S238N-H82]
 gi|164648394|gb|EDR12637.1| histone deacetylase complex, catalytic component RPD3 [Laccaria
           bicolor S238N-H82]
          Length = 408

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/339 (56%), Positives = 248/339 (73%), Gaps = 3/339 (0%)

Query: 11  YDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVE 70
           Y  DVG+  +G  HPMKPHR+ +TH LV +Y +  KM + R  +A P  +  FH+ +YV 
Sbjct: 1   YPADVGAYTYGLGHPMKPHRIRVTHDLVTAYGMLDKMHVLRAKRATPETMTSFHTDEYVH 60

Query: 71  FLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAIN 130
           FL+R+TP+T        T++ +GED P FE +FEFC I AGG+I AA+R+ +   DIAIN
Sbjct: 61  FLNRVTPETSEELTYHGTRFLVGEDNPAFEGVFEFCSISAGGSIAAAQRITSGAADIAIN 120

Query: 131 WAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVM 190
           WAGGLHHAKK EASGFCYIND+VLGILELL+ + RVLYIDID HHGDGVEEAFY TDRVM
Sbjct: 121 WAGGLHHAKKREASGFCYINDIVLGILELLRTYPRVLYIDIDCHHGDGVEEAFYTTDRVM 180

Query: 191 TVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYA 250
           T SFHKFG+ +FPGTG  ++ G   G+ YA+NVPLKDGI D SF  +F+ +I+K++ET+ 
Sbjct: 181 TCSFHKFGE-YFPGTGTQEDKGRGRGRGYAVNVPLKDGITDESFRSVFEPVITKILETFQ 239

Query: 251 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWT 310
           P AIVLQCGADSLAGD+LGCFNL++ GHA CV+FV+K N+P ++ GGGGYT +NVAR WT
Sbjct: 240 PSAIVLQCGADSLAGDKLGCFNLTMHGHAHCVQFVRKQNIPFILLGGGGYTVKNVARTWT 299

Query: 311 VETGILLDTE--LPNEIPENEYIKYFAPECSLRIPNGHI 347
            ET   L  E  +   +P N+Y ++F P   L +   ++
Sbjct: 300 YETACALGIEESIDPNLPWNQYFEWFGPRYRLEVAENNM 338


>gi|302696127|ref|XP_003037742.1| hypothetical protein SCHCODRAFT_62855 [Schizophyllum commune H4-8]
 gi|300111439|gb|EFJ02840.1| hypothetical protein SCHCODRAFT_62855 [Schizophyllum commune H4-8]
          Length = 651

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/344 (54%), Positives = 254/344 (73%), Gaps = 3/344 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +  +ISY+YD DVGS  +G  HPMKPHR+ +TH LV +Y +  KM I R  +A   ++
Sbjct: 1   MTANKRISYYYDPDVGSYTYGLGHPMKPHRMRVTHELVSAYGMLDKMHILRAKRASTEDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +FH+ +YV+FL+R+TP+T      + T++ +G+D P FE +FEFC I AGG++ AA R+
Sbjct: 61  TRFHTDEYVDFLNRVTPETAEDLTYQGTRFLVGDDNPAFEGVFEFCSISAGGSLAAAERI 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           ++   DI INW+GGLHHAKK EASGFCYIND+VL IL+LL+ H RVLY+DID HHGDGVE
Sbjct: 121 SSGASDICINWSGGLHHAKKREASGFCYINDIVLCILDLLRTHPRVLYVDIDCHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMT SFHKFG+ +FPGTG   + G  +GK YA+NVPLKDGI D S+  +F+ 
Sbjct: 181 EAFYTTDRVMTCSFHKFGE-YFPGTGTQDDRGHGKGKGYAVNVPLKDGITDDSYQSIFEP 239

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++++V+E + P  ++LQCG+DSL+GD+LGCFNLS++GHA CV+F +K NLPL++ GGGGY
Sbjct: 240 VVTRVLEVFRPSVVILQCGSDSLSGDKLGCFNLSMEGHARCVQFFRKQNLPLIMLGGGGY 299

Query: 301 TKENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRI 342
           T +NVAR WT ET   L  E  +   +P NEY ++F P   L +
Sbjct: 300 TVKNVARTWTYETACALGIEDTIDPHMPWNEYFEWFGPRYRLEV 343


>gi|262301841|gb|ACY43513.1| histone deacetylase [Semibalanus balanoides]
 gi|262301843|gb|ACY43514.1| histone deacetylase [Chthamalus fragilis]
          Length = 283

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/284 (66%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNQQAAEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+YA+N PL+DGIDD  + ++F  I+SKV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYAVNFPLRDGIDDEVYEQIFVPIMSKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFIKRYNLPLLLLGGGGYTIRNVAR 283


>gi|262301883|gb|ACY43534.1| histone deacetylase [Ischnura verticalis]
          Length = 271

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 181/272 (66%), Positives = 227/272 (83%), Gaps = 1/272 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  DI INW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASDICINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N+PL+DG+DD S+  +F  IISKV+ET+ P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFNPIISKVMETFQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
            GDRLGCFNL++ GH +CV FVKK+NLP L+ 
Sbjct: 240 TGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMV 271


>gi|2654535|gb|AAB87752.1| histone deacetylase-3C [Homo sapiens]
 gi|119582322|gb|EAW61918.1| histone deacetylase 3, isoform CRA_c [Homo sapiens]
          Length = 371

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/312 (59%), Positives = 237/312 (75%), Gaps = 6/312 (1%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + +FHS DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +
Sbjct: 1   MCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQ 60

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LNN++CDIAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV
Sbjct: 61  LNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGV 120

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           +EAFY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+
Sbjct: 121 QEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQ 180

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +I++VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGG
Sbjct: 181 PVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGG 240

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKE 353
           YT  NVARCWT ET +L++  +  E+P +EY +YFAP+ +L      RI N +      +
Sbjct: 241 YTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQ 300

Query: 354 IDKFILFNKQIL 365
           I + I  N ++L
Sbjct: 301 IRQTIFENLKML 312


>gi|262301887|gb|ACY43536.1| histone deacetylase [Lepas anserifera]
          Length = 283

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/284 (66%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNQQAAEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+YA+N PL+DGIDD  + ++F  I+SKV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYAVNFPLRDGIDDDVYEQIFVPIMSKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFIKRYNLPLLLLGGGGYTIRNVAR 283


>gi|123489954|ref|XP_001325510.1| acetylpolyamine aminohydrolase [Trichomonas vaginalis G3]
 gi|121908410|gb|EAY13287.1| acetylpolyamine aminohydrolase, putative [Trichomonas vaginalis G3]
          Length = 405

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/337 (57%), Positives = 239/337 (70%), Gaps = 1/337 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  I Y YD + G   +  +HPMKP+R+ MTH L+ +Y L  K+++  P +A   +L QF
Sbjct: 3   KKNIVYLYDEESGGFVYERSHPMKPYRIKMTHSLLCAYGLLDKLQVLTPRRARVEDLIQF 62

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H   Y+ F+           R     YN+  D P F  LFEFCQI AG +I AA  LN+ 
Sbjct: 63  HDEGYINFIKNSNDKNISKNRNAAEYYNITGDSPFFPGLFEFCQISAGASITAAELLNSG 122

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
              IAINWAGGLHHA+K EASGFCY+ND VLGIL+LL+ + RVLYIDID+HHGDGVEEAF
Sbjct: 123 KTQIAINWAGGLHHARKAEASGFCYVNDCVLGILKLLERYQRVLYIDIDIHHGDGVEEAF 182

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRV TVSFHKFGD FFPGTG + +IG R+GK+YA+NVPL+DG++D  +  LFK I++
Sbjct: 183 YTTDRVFTVSFHKFGD-FFPGTGALSDIGTRKGKYYALNVPLRDGMNDEDYLGLFKPILT 241

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
            ++E Y P AI  QCGADSLAGD+LG FNLSI GH ECVRFVK F +P++V GGGGYT  
Sbjct: 242 NIIEWYRPNAIFFQCGADSLAGDKLGGFNLSIHGHGECVRFVKNFGIPMVVAGGGGYTTR 301

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           NV+RCWT ET ILLD  L N IPE+E+  Y+APE  L
Sbjct: 302 NVSRCWTYETAILLDEVLDNNIPEHEFSSYYAPEMHL 338


>gi|170093772|ref|XP_001878107.1| histone deacetylase complex, catalytic component RPD3 [Laccaria
           bicolor S238N-H82]
 gi|164646561|gb|EDR10806.1| histone deacetylase complex, catalytic component RPD3 [Laccaria
           bicolor S238N-H82]
          Length = 531

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/356 (53%), Positives = 251/356 (70%), Gaps = 8/356 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVELAQFHS 65
           +SY++   VG+ ++G  HPMKPHRL +T+ LV+ Y L K++  IY P  A   EL  +H 
Sbjct: 1   VSYYFPKGVGAQHYGERHPMKPHRLTLTNALVMGYGLDKQIHHIYDPRPATQEELENYHD 60

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+EFL ++TP  Q   RQ +  +N  EDCP+F ++++FC++YAGG++  AR+L     
Sbjct: 61  HDYIEFLSKVTPQNQGQMRQMIDNFNCVEDCPIFADIYDFCRMYAGGSLAGARKLCAGTT 120

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAK+ EASGFCY+ND+VLGILELL+YH RVLYIDID+HHGDGVE AFY 
Sbjct: 121 DIAINWSGGLHHAKRGEASGFCYVNDIVLGILELLRYHPRVLYIDIDIHHGDGVELAFYQ 180

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           ++RVMTVSFHK+   FFPGTG + + G   GK + +NVPL DGIDD  +  +FKT+I   
Sbjct: 181 SNRVMTVSFHKYTGDFFPGTGKLDDNGNGLGKHFCLNVPLLDGIDDDMYLTIFKTVIDDT 240

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           V  + P AIVLQCGADSL  DRLG FNLSI  H ECV FV+K+N+PLLV GGGGYT +NV
Sbjct: 241 VTAFRPSAIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKYNVPLLVVGGGGYTIKNV 300

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
           +RCWT ET +L+  E+P+E+P   Y  +F        P  + ++ N +   S + I
Sbjct: 301 SRCWTYETSVLVGAEIPDELPATVYDSFFEDSHWKLHPPLTGKVDNQNSPASLQRI 356


>gi|262301929|gb|ACY43557.1| histone deacetylase [Skogsbergia lerneri]
          Length = 282

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/283 (66%), Positives = 237/283 (83%), Gaps = 1/283 (0%)

Query: 25  PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
           PMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    + 
Sbjct: 1   PMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEYN 60

Query: 85  QELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 144
           +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct: 61  KQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEAS 120

Query: 145 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 204
           GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct: 121 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 179

Query: 205 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 264
           TGD+++IG  +GK+YA+N PL+DGI+D S+  +F  I+SKV+ETY P A+VLQCGADSL+
Sbjct: 180 TGDLRDIGAGKGKYYAVNFPLRDGIEDESYESIFVPIMSKVMETYQPSAVVLQCGADSLS 239

Query: 265 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           GDRLGCFNL++ GHA+CV FVK++NLPLL+ GGGGYT  NVAR
Sbjct: 240 GDRLGCFNLTLRGHAKCVEFVKRYNLPLLLLGGGGYTIRNVAR 282


>gi|157813962|gb|ABV81726.1| putative histone deacetylase 1 [Cypridopsis vidua]
          Length = 283

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   +L +FHS DY+ FL  I PD    F
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATYEDLTRFHSGDYIGFLRTIRPDNLVEF 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            + + K+N+GEDCPVF+ ++EFCQ+ +GG+I  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  SKAMGKFNVGEDCPVFDGMYEFCQLSSGGSIAGAVKLNKQQTDIAINWAGGLHHAKKAEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYANDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD++++G  +GK+YA+N PL+DGIDD+S+  +F+ +++KV+ETY PG IVLQCGADSL
Sbjct: 180 GTGDLRDLGAGKGKYYAVNFPLRDGIDDSSYESIFEPVMTKVMETYQPGIIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV F+K++NLP+L+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFMKRYNLPVLLLGGGGYTIRNVAR 283


>gi|255732563|ref|XP_002551205.1| histone deacetylase phd1 [Candida tropicalis MYA-3404]
 gi|240131491|gb|EER31051.1| histone deacetylase phd1 [Candida tropicalis MYA-3404]
          Length = 451

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/343 (54%), Positives = 250/343 (72%), Gaps = 8/343 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S   +SY Y+  V   ++G  HPMKP RL +T HLV+SY L++KM++Y P +A   EL +
Sbjct: 30  SNTNVSYHYNPAVSHFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPREATEEELLE 89

Query: 63  FHSADYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY+ FL  ITPD  ++L    L K+N+G+DCP+F+ ++++  IYAG ++DA R+L 
Sbjct: 90  FHSEDYINFLQTITPDKVKNLSNDTLIKFNIGDDCPIFDGMYDYSAIYAGASLDATRKLM 149

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           + + DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+E
Sbjct: 150 SGMSDIAINWSGGLHHAKKSEPSGFCYVNDIVLSIINLLRKHPRVMYIDIDLHHGDGVQE 209

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+   FFP TG V E+G  +G+ +AINVPL+DGIDD S+ RLFK+I
Sbjct: 210 AFYNTDRVMTVSFHKYNGEFFPATGSVDEVGVGKGENFAINVPLRDGIDDESYIRLFKSI 269

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +  ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT
Sbjct: 270 MEPLISKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 329

Query: 302 KENVARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL 340
             NV+R W  ET +L    LD ++PN +P  +   +F P+ SL
Sbjct: 330 PRNVSRLWCYETSVLNDVTLDHKIPNYLPTYD---WFGPDYSL 369


>gi|403419064|emb|CCM05764.1| predicted protein [Fibroporia radiculosa]
          Length = 581

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/333 (55%), Positives = 241/333 (72%), Gaps = 1/333 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVELA 61
           S+  +SY++   +G  ++G  HPMKPHRL +T+ LV+ Y L K++  IY P  A   EL 
Sbjct: 36  SRPIVSYYFPKGIGEQHYGERHPMKPHRLTLTNALVMGYGLDKQIHHIYNPRPATQAELE 95

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H  DY+EFL R+TP  Q   +  +  +N  EDCP+F +++EFC++YAGG++ AAR+L 
Sbjct: 96  AYHDHDYIEFLSRVTPQNQADMKHLIDSFNCVEDCPIFSDMYEFCRMYAGGSLAAARKLC 155

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL+YH RVLYIDID+HHGDGVE 
Sbjct: 156 AGTTDIAINWSGGLHHAKKGEASGFCYVNDIVLAILELLRYHPRVLYIDIDIHHGDGVEF 215

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY T+RVMTVSFHK+   FFPGTG + + G   GK + +NVPL+DGIDD  +  +FK++
Sbjct: 216 AFYHTNRVMTVSFHKYTGDFFPGTGKLDDNGTGPGKHFCLNVPLQDGIDDNMYLTIFKSV 275

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I   V  + P +IVLQCGADSL  DRLG FNLSI  H ECV FV+ FN+PLLV GGGGYT
Sbjct: 276 IDDTVTAFRPTSIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRNFNVPLLVVGGGGYT 335

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYF 334
            +NV+RCWT ET +L+   +P+E+P   Y  +F
Sbjct: 336 IKNVSRCWTYETSVLVGAAVPDELPATIYDSFF 368


>gi|262301837|gb|ACY43511.1| histone deacetylase [Artemia salina]
          Length = 283

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEITKFHSDDYIRFLRSIRPDNMGEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQSTDIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYEQIFVPIMSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GH +CV F KK N+PLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHGKCVEFFKKLNIPLLLLGGGGYTIRNVAR 283


>gi|302848215|ref|XP_002955640.1| hypothetical protein VOLCADRAFT_66043 [Volvox carteri f.
           nagariensis]
 gi|300259049|gb|EFJ43280.1| hypothetical protein VOLCADRAFT_66043 [Volvox carteri f.
           nagariensis]
          Length = 414

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 184/328 (56%), Positives = 251/328 (76%), Gaps = 6/328 (1%)

Query: 1   MRSKDKI-SYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE 59
           M+  +K+ +YFYD D+G+  +G  +PM+PHR  M + LV SY L KKM + RP      E
Sbjct: 1   MKPAEKVVAYFYDDDIGNYCYGGGNPMRPHRARMCYTLVDSYGLTKKMMVQRPRAREFEE 60

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLG----EDCPVFENLFEFCQIYAGGTID 115
           L QFH+ DY+ FL  +TP+       +L ++N+G     DCPVF+ L+E+CQ+YAGG++D
Sbjct: 61  LTQFHADDYINFLRGVTPNMVDENMTQLRRFNMGIAGEADCPVFDGLYEYCQVYAGGSVD 120

Query: 116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH 175
            A +L +   +I+ NW+GG+HHAKK EASGFCY+ND+V+ ILELLK +ARVLY+DID+HH
Sbjct: 121 GAAQLASGAAEISFNWSGGMHHAKKAEASGFCYVNDIVMAILELLKTYARVLYVDIDIHH 180

Query: 176 GDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFT 235
           GDGVEEAFY TDRVMTVSFHK+G+ FFPGTG + +IG  +GK+Y +NVPLKDG+DD S+ 
Sbjct: 181 GDGVEEAFYLTDRVMTVSFHKYGE-FFPGTGALDDIGYGKGKYYTVNVPLKDGMDDDSYR 239

Query: 236 RLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
            +++ I+ KV+E Y PGAIV+ CGADSL+GDRLGCFNLS++GH+ C+ F+ KFN+P+++ 
Sbjct: 240 LVYEPIMQKVMEMYQPGAIVMCCGADSLSGDRLGCFNLSLEGHSNCLEFLAKFNVPMVIL 299

Query: 296 GGGGYTKENVARCWTVETGILLDTELPN 323
           GGGGYT  NVARCW  ETG +++ +LP+
Sbjct: 300 GGGGYTLRNVARCWCYETGRMMNIDLPD 327


>gi|58270722|ref|XP_572517.1| histone deacetylase 1 (hd1) [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134115999|ref|XP_773386.1| hypothetical protein CNBI3250 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256010|gb|EAL18739.1| hypothetical protein CNBI3250 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228775|gb|AAW45210.1| histone deacetylase 1 (hd1), putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 621

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/387 (48%), Positives = 258/387 (66%), Gaps = 51/387 (13%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL---------------------- 43
           +++Y+YD DVG+  +   HPMKPHR+ M H+L+++Y +                      
Sbjct: 21  RVAYYYDQDVGNYNYYLGHPMKPHRIRMAHNLIVNYGMCDEEGQEHGPAEVWGEGKRAVN 80

Query: 44  ----------------------------HKKMEIYRPHKAYPVELAQFHSADYVEFLHRI 75
                                        K M++++P +A   E+ +FH+ +Y++ L  +
Sbjct: 81  DEIAQNWGGGEMGDAEVKWEKAALRGSRSKTMQVFKPRRATKEEMTRFHTDEYIDLLEAV 140

Query: 76  TPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL 135
           TP+T        T+  +GEDCP F+ LFEFC I AGG++ AA RLN    DI INWAGGL
Sbjct: 141 TPETADALTGGGTRCLIGEDCPAFDGLFEFCTISAGGSLGAAERLNAGAADIVINWAGGL 200

Query: 136 HHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 195
           HHAKK EASGFCY+ND+VLGILELL+ H RVLYID+DVHHGDGVEEAFY TDRVMT SFH
Sbjct: 201 HHAKKTEASGFCYVNDIVLGILELLRIHPRVLYIDVDVHHGDGVEEAFYVTDRVMTCSFH 260

Query: 196 KFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIV 255
           +FG+ FFPGTGDV+++G ++GK YA+NVPL+DGI D SF  +FK +I +++  + P A+V
Sbjct: 261 RFGE-FFPGTGDVRDVGMKKGKGYAVNVPLRDGITDDSFQSIFKPVIDRIMSHFRPSAVV 319

Query: 256 LQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGI 315
           LQ GADS++GD+LG FNL+++GHAEC RF+K FN+P+++ GGGGYT +NVAR WT ET I
Sbjct: 320 LQMGADSISGDKLGGFNLTLEGHAECARFIKSFNVPVMMVGGGGYTVKNVARAWTKETAI 379

Query: 316 LLDTELPNEIPENEYIKYFAPECSLRI 342
           +   +L  ++P N++++Y+ P   L +
Sbjct: 380 MCGVDLAEDLPYNQFLEYYGPRYKLEV 406


>gi|262301823|gb|ACY43504.1| histone deacetylase [Aphonopelma chalcodes]
          Length = 284

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/285 (66%), Positives = 238/285 (83%), Gaps = 2/285 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DYV FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYVRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR-LFKTIISKVVETYAPGAIVLQCGADS 262
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ + +F+ +ISKV+E Y P A+VLQCGADS
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQGIFQPLISKVMEMYQPSAVVLQCGADS 239

Query: 263 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           L+GDRLGCFNL++ GH +CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 LSGDRLGCFNLTLKGHGKCVEFVKKYNLPLLLLGGGGYTIRNVAR 284


>gi|254586507|ref|XP_002498821.1| ZYRO0G19316p [Zygosaccharomyces rouxii]
 gi|238941715|emb|CAR29888.1| ZYRO0G19316p [Zygosaccharomyces rouxii]
          Length = 448

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/337 (56%), Positives = 244/337 (72%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V + ++G  HPMKP RL +T HLV SY LHK M++Y    A   E+  FHS
Sbjct: 26  RVSYHFNPKVSNYHYGTKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRVATWEEMTAFHS 85

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            +YV+F+ R+TP+    L R  L K+N+G+DCP+F NL+++  +YAG ++DA+R+L N  
Sbjct: 86  EEYVDFMKRVTPENLNKLPRGTLEKFNIGDDCPIFPNLYDYSSLYAGASLDASRKLINDQ 145

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL  L LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 146 SDIAINWSGGLHHAKKSNPSGFCYVNDIVLATLNLLRYHPRVLYIDIDLHHGDGVQEAFY 205

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV TVSFHK+   FFPGTG+  E+G   GK +A+NVPL+DGIDD S+  LFK+II  
Sbjct: 206 TTDRVYTVSFHKYNGEFFPGTGNHDEVGCARGKHFALNVPLQDGIDDDSYINLFKSIIDP 265

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++ +Y P  IV QCGADSL  DRLGCFNL++  H ECV FV+ F LP+LV GGGGYT  N
Sbjct: 266 LITSYKPTVIVQQCGADSLGHDRLGCFNLNVKAHGECVNFVRSFGLPMLVVGGGGYTPRN 325

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R WT ETGIL +  LP ++PE   +   F P+ SL
Sbjct: 326 VSRLWTYETGILNNVLLPKDLPEGIPFRDRFGPDYSL 362


>gi|331224551|ref|XP_003324947.1| histone deacetylase 1/2 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309303937|gb|EFP80528.1| histone deacetylase 1/2 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 606

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/350 (55%), Positives = 262/350 (74%), Gaps = 9/350 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++Y+YD DVG+  + P+HPMKPHR+ M H+L+L+  L++KM++    +A   E+ +FH+
Sbjct: 3   RVAYYYDDDVGAYAYAPHHPMKPHRIKMAHNLILNAGLNQKMDMLCAKRATREEMTKFHT 62

Query: 66  ADYVEFLHRIT---PDTQHLFRQEL--TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +Y+  + ++    P+T    R +    ++ +G+DCP FE LFEFC I AGG+I AA+R+
Sbjct: 63  DEYICHIAQVNQEDPETLVSGRDKSGDNRFLVGDDCPGFEGLFEFCSISAGGSIAAAKRI 122

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL++H+RVLYIDID+HHGDGVE
Sbjct: 123 NSGQADIAINWSGGLHHAKKREASGFCYVNDIVLAILELLRFHSRVLYIDIDIHHGDGVE 182

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRVMT SFHKFGD FFPGTG V + G  +GK YA+NVPLK GIDD ++  +F+ 
Sbjct: 183 EAFYTTDRVMTCSFHKFGD-FFPGTGHVGDRGIGKGKGYAVNVPLKTGIDDDTYRSIFRP 241

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I+ ++  Y PGAIVLQCGADSLA D+LG FNLS++GHA+CVR VK FN+PL+V GGGGY
Sbjct: 242 VINHIMSWYQPGAIVLQCGADSLAEDKLGSFNLSMNGHADCVRHVKSFNVPLVVLGGGGY 301

Query: 301 TKENVARCWTVETGILLDT--ELP-NEIPENEYIKYFAPECSLRIPNGHI 347
           T  NVAR W  ET + L    EL   ++P NEY++YF P   L +P+ ++
Sbjct: 302 TIRNVARTWAFETSVCLGPHEELSLADLPYNEYMEYFGPNFKLEVPSNNM 351


>gi|222635799|gb|EEE65931.1| hypothetical protein OsJ_21797 [Oryza sativa Japonica Group]
          Length = 478

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/340 (58%), Positives = 248/340 (72%), Gaps = 42/340 (12%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K ++ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L  +M+              
Sbjct: 20  AKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQ-------------- 65

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
                                     ++N+GEDCPVF+ L+ FCQ YAGG++  A +LN+
Sbjct: 66  --------------------------RFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNH 99

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEA
Sbjct: 100 GH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 158

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHKFGD +FPGTGD+++IG  +GK+Y++NVPL DGIDD S+  LFK I+
Sbjct: 159 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 217

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVRF++ FN+PLL+ GGGGYT 
Sbjct: 218 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTI 277

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCW  ETG+ L  EL +++P NEY +YF P+ +L +
Sbjct: 278 RNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHV 317


>gi|262301897|gb|ACY43541.1| histone deacetylase [Loxothylacus texanus]
          Length = 283

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 239/284 (84%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQDEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  +IAINW+GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNQQATEIAINWSGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+YA+N PL+DGIDD ++ ++F  I+SKV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYAVNFPLRDGIDDDAYEQIFVPIMSKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA CVRF+K++NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHARCVRFIKRYNLPLLMLGGGGYTIRNVAR 283


>gi|68476398|ref|XP_717660.1| potential SET3 histone deacetylase complex component Hos2p [Candida
           albicans SC5314]
 gi|46439380|gb|EAK98698.1| potential SET3 histone deacetylase complex component Hos2p [Candida
           albicans SC5314]
          Length = 454

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/376 (51%), Positives = 264/376 (70%), Gaps = 16/376 (4%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K  +SY Y+ +V   ++G  HPMKP RL +T HLV+SY L++KM++Y P +A   EL +
Sbjct: 33  NKYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELLE 92

Query: 63  FHSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY++FL  ITP+  + +    L ++N+G+DCP+F+ ++++  IYAG ++DA R+L 
Sbjct: 93  FHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKLI 152

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           + + DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+E
Sbjct: 153 SGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQE 212

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+   FFPGTG V E+G   GK YAINVPL+DGIDD S+ RLFK+I
Sbjct: 213 AFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSI 272

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +  ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT
Sbjct: 273 MEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 332

Query: 302 KENVARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSF 351
             NV+R W  ET +L    LD ++PN +P  +   +F P+ SL      RI N +     
Sbjct: 333 PRNVSRLWCYETSVLNDVNLDHKIPNYLPTYD---WFGPDYSLHPQLDGRIDNKNSKKYL 389

Query: 352 KEIDKFILFNKQILYF 367
           + +   I+  +QI Y 
Sbjct: 390 QSVQTTIM--EQIRYL 403


>gi|262301821|gb|ACY43503.1| histone deacetylase [Armillifer armillatus]
          Length = 283

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 236/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GGT+ AA +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGTVAAAVKLNKQATDIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+ L ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIALAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DG+DD SF  +F  ++SKV+ETY P A+VLQCG+DSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGMDDESFESVFVPVVSKVMETYQPSAVVLQCGSDSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GH +CV FVKKFNLPLL+ GGGGYT  NVAR
Sbjct: 240 TGDRLGCFNLTLKGHGKCVEFVKKFNLPLLMLGGGGYTIRNVAR 283


>gi|312385914|gb|EFR30302.1| hypothetical protein AND_00159 [Anopheles darlingi]
          Length = 374

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 180/281 (64%), Positives = 230/281 (81%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + +FHS +Y+EFL R+TP     + + L+ +N+G+DCPVF+ LFEFC +Y G +++ A++
Sbjct: 1   MCRFHSDEYIEFLQRVTPQNIQGYTKCLSVFNVGDDCPVFDGLFEFCAMYTGASLEGAQK 60

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN+   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV
Sbjct: 61  LNHNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGV 120

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           +EAFY TDRVMTVSFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK
Sbjct: 121 QEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYVQVFK 180

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +IS V+E Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK  N+P LV GGGG
Sbjct: 181 PVISAVMEFYQPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKDLNVPTLVVGGGG 240

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           YT  NVARCWT ET +L+D  + NE+P N+Y+++FAP+ +L
Sbjct: 241 YTLRNVARCWTYETSLLIDETISNELPMNDYLEFFAPDFTL 281


>gi|351710106|gb|EHB13025.1| Histone deacetylase 2 [Heterocephalus glaber]
          Length = 431

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/336 (58%), Positives = 247/336 (73%), Gaps = 32/336 (9%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL
Sbjct: 20  GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 79

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWA
Sbjct: 80  RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWA 139

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTV
Sbjct: 140 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTV 199

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD++                               IISKV+E Y P 
Sbjct: 200 SFHKYGE-YFPGTGDLR-------------------------------IISKVMEMYQPS 227

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT E
Sbjct: 228 AVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYE 287

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           T   LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 288 TAAALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 323


>gi|241952595|ref|XP_002419019.1| histone deacetylase, putative [Candida dubliniensis CD36]
 gi|223642359|emb|CAX42601.1| histone deacetylase, putative [Candida dubliniensis CD36]
          Length = 454

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/376 (51%), Positives = 263/376 (69%), Gaps = 16/376 (4%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K  +SY Y+ +V   ++G  HPMKP RL +T HLV+SY L++KM++Y P +A   EL +
Sbjct: 33  NKYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKEELLE 92

Query: 63  FHSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY+ FL  ITP+  + +    L ++N+G+DCP+F+ ++++  IYAG ++DA R+L 
Sbjct: 93  FHSEDYINFLQSITPEKCKTIGNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKLI 152

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           + + DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+E
Sbjct: 153 SGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQE 212

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+   FFPGTG V E+G   GK YAINVPL+DGIDD S+ RLFK+I
Sbjct: 213 AFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSI 272

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +  ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT
Sbjct: 273 MEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 332

Query: 302 KENVARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSF 351
             NV+R W  ET +L    LD ++PN +P  +   +F P+ SL      RI N +     
Sbjct: 333 PRNVSRLWCYETSVLNDVSLDHKIPNYLPTYD---WFGPDYSLHPQLDGRIDNKNSKKYL 389

Query: 352 KEIDKFILFNKQILYF 367
           + +   I+  +QI Y 
Sbjct: 390 QSVQTTIM--EQIRYL 403


>gi|354547341|emb|CCE44075.1| hypothetical protein CPAR2_503000 [Candida parapsilosis]
          Length = 414

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/325 (56%), Positives = 245/325 (75%), Gaps = 1/325 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+SY Y+ +V + ++G  HPMKP RL +T HLV +Y LH+KM++Y P +A   EL Q
Sbjct: 30  SKTKVSYHYNPEVANYHYGTLHPMKPFRLMLTDHLVSTYKLHEKMDLYTPRRATKDELLQ 89

Query: 63  FHSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY++FL  +TP+T + L  Q L K+N+G+DCPVF+ +F++  IYAG ++DA+R++ 
Sbjct: 90  FHSEDYIDFLQSVTPETVKRLSDQTLAKFNIGDDCPVFDGMFDYSSIYAGASLDASRKII 149

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
             + DIAINW+GGLHHAKK E SGFCYIND+VL I+ LL+ + RVLY+DID+HHGDGV+E
Sbjct: 150 AGMSDIAINWSGGLHHAKKFEPSGFCYINDIVLCIINLLRIYPRVLYVDIDLHHGDGVQE 209

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+   FFPGTG   E+G  +GK ++INVPL+DG+DD S+  LFK+I
Sbjct: 210 AFYTTDRVMTVSFHKYDGEFFPGTGSGDEVGIGKGKNFSINVPLRDGVDDESYVALFKSI 269

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +  V+  + P  IV QCGADSL GDRLG FNLS+ GH  C+ F+K F +P++V GGGGYT
Sbjct: 270 MQGVIPKFQPSIIVAQCGADSLGGDRLGRFNLSLKGHGSCLNFLKSFEIPMVVLGGGGYT 329

Query: 302 KENVARCWTVETGILLDTELPNEIP 326
            +NV+R W  ET +L DT L  +IP
Sbjct: 330 PKNVSRLWCYETAVLTDTTLNGKIP 354


>gi|68476209|ref|XP_717754.1| potential SET3 histone deacetylase complex component Hos2p [Candida
           albicans SC5314]
 gi|46439481|gb|EAK98798.1| potential SET3 histone deacetylase complex component Hos2p [Candida
           albicans SC5314]
 gi|238880514|gb|EEQ44152.1| histone deacetylase phd1 [Candida albicans WO-1]
          Length = 454

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/376 (51%), Positives = 264/376 (70%), Gaps = 16/376 (4%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K  +SY Y+ +V   ++G  HPMKP RL +T HLV+SY L++KM++Y P +A   EL +
Sbjct: 33  NKYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELLE 92

Query: 63  FHSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY++FL  ITP+  + +    L ++N+G+DCP+F+ ++++  IYAG ++DA R+L 
Sbjct: 93  FHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKLI 152

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           + + DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+E
Sbjct: 153 SGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQE 212

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMTVSFHK+   FFPGTG V E+G   GK YAINVPL+DGIDD S+ RLFK+I
Sbjct: 213 AFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSI 272

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +  ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT
Sbjct: 273 MEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 332

Query: 302 KENVARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSF 351
             NV+R W  ET +L    LD ++PN +P  +   +F P+ SL      RI N +     
Sbjct: 333 PRNVSRLWCYETSVLNDVNLDHKIPNYLPTYD---WFGPDYSLHPQLDGRIDNKNSKKYL 389

Query: 352 KEIDKFILFNKQILYF 367
           + +   I+  +QI Y 
Sbjct: 390 QSVQTTIM--EQIRYL 403


>gi|389746784|gb|EIM87963.1| hypothetical protein STEHIDRAFT_138470 [Stereum hirsutum FP-91666
           SS1]
          Length = 597

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 183/342 (53%), Positives = 251/342 (73%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++SY+YD D+G   +G  HPMKP R+ +TH L+ +YDL  ++++ R  +A P  +  
Sbjct: 4   SPRRVSYYYDPDIGCFSYGQPHPMKPLRMRITHELLTAYDLLPRLDVMRAKRATPEMMTA 63

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV FL+R+TPDT      + T++ +G+D P FE +FEFC I AGGTI AA+RL +
Sbjct: 64  FHTDEYVHFLNRVTPDTAEALTYQGTRFLMGDDNPAFEGIFEFCSISAGGTIAAAQRLTS 123

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            L DIA+NWAGGLHHAKK EASGFCYIND+VLGILELLK+  RVLY+DID HHGDGVEEA
Sbjct: 124 GLSDIALNWAGGLHHAKKREASGFCYINDIVLGILELLKHFPRVLYVDIDCHHGDGVEEA 183

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRV+T SFHKFGD +FPGTG +++ G   G+ Y +NVPLK+G+ D SF  +F+ +I
Sbjct: 184 FYTTDRVLTCSFHKFGD-YFPGTGTIEDRGTGAGRGYTVNVPLKNGLGDESFKSIFEPVI 242

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             +++ + P AIVLQCG+DSL+GD+LGCFN+++ GHA  V+F+++FN+P+++ GGGGYT 
Sbjct: 243 QAILDRFQPSAIVLQCGSDSLSGDKLGCFNITMHGHASAVQFLRRFNIPMILVGGGGYTV 302

Query: 303 ENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRI 342
           +N +R W  ET   L  E  L   +P NE+ ++F P   L +
Sbjct: 303 KNASRTWAFETACALGVEDQLDPRLPWNEFFEWFGPRYRLEV 344


>gi|157813956|gb|ABV81723.1| putative histone deacetylase 1 [Mastigoproctus giganteus]
          Length = 284

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/285 (66%), Positives = 238/285 (83%), Gaps = 2/285 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR-LFKTIISKVVETYAPGAIVLQCGADS 262
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ + +F+ +ISKV+E Y P AIVLQCGADS
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQGVFQPLISKVMEMYQPSAIVLQCGADS 239

Query: 263 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           L+GDRLGCFNL++ GH +CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 LSGDRLGCFNLTLKGHGKCVDFVKKYNLPLLLLGGGGYTIRNVAR 284


>gi|355562127|gb|EHH18759.1| hypothetical protein EGK_15423 [Macaca mulatta]
          Length = 467

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/298 (63%), Positives = 240/298 (80%), Gaps = 1/298 (0%)

Query: 51  RPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYA 110
           RPHKA   E+ ++HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  
Sbjct: 56  RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLST 115

Query: 111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYID 170
           GG++  A +LN Q  D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYID
Sbjct: 116 GGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYID 175

Query: 171 IDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGID 230
           ID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGID
Sbjct: 176 IDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGID 234

Query: 231 DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNL 290
           D S+ ++FK IISKV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNL
Sbjct: 235 DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNL 294

Query: 291 PLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           PLL+ GGGGYT  NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 295 PLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352


>gi|302676938|ref|XP_003028152.1| hypothetical protein SCHCODRAFT_36526 [Schizophyllum commune H4-8]
 gi|300101840|gb|EFI93249.1| hypothetical protein SCHCODRAFT_36526 [Schizophyllum commune H4-8]
          Length = 411

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/364 (53%), Positives = 253/364 (69%), Gaps = 8/364 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVELA 61
           S+  +SY++   VGS +FG  HPMKPHRL +T+ LV+ Y L K++ EI+    A   EL 
Sbjct: 5   SRPAVSYYFPKGVGSYHFGELHPMKPHRLTLTNALVMGYGLDKQIHEIFDARPATREELE 64

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H ADY+E+L ++TP  Q   + E+  +N GEDCP+F  +++FCQ YAGGT+ AAR+L 
Sbjct: 65  VYHDADYIEYLSKVTPQNQKSMKAEVEAHNCGEDCPIFAGMYDFCQKYAGGTLAAARKLC 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DIAINW+GGLHHAK+ EASGFCY+ND+VLGILELL+Y+ RVLYIDID+HHGDGVE 
Sbjct: 125 SGKTDIAINWSGGLHHAKRGEASGFCYVNDIVLGILELLRYYPRVLYIDIDIHHGDGVEL 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY T+RVMT+SFHK+   FFPGTG + + G   GK +A+NVPL+DGIDD  +  LFK+I
Sbjct: 185 AFYHTNRVMTLSFHKYTGEFFPGTGKLDDNGIGLGKHFALNVPLQDGIDDKMYLDLFKSI 244

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           ++ V + Y P AIVLQCGADSL  DRLG FNLSI  H  CV  V+ F +PLLV GGGGYT
Sbjct: 245 VNDVRDKYQPSAIVLQCGADSLGCDRLGAFNLSIAAHGACVGHVRAFGIPLLVVGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
             NV+RCWT ET +L    +P+ +P   Y  +FA       P  + R+ N +   S  +I
Sbjct: 305 LNNVSRCWTYETAVLAGATVPDALPRTPYDSFFADSRWTLHPPLTGRVDNQNTPQSLAKI 364

Query: 355 DKFI 358
              I
Sbjct: 365 TSAI 368


>gi|262301875|gb|ACY43530.1| histone deacetylase [Hadrurus arizonensis]
          Length = 283

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/284 (65%), Positives = 236/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD ++  +F+ +ISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDEAYEGIFQPLISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GH +CV FVKK+ +PLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHGKCVEFVKKYQMPLLLLGGGGYTIRNVAR 283


>gi|262301869|gb|ACY43527.1| histone deacetylase [Euperipatoides rowelli]
          Length = 283

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/284 (64%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+ A+N PL+DGIDD S+  +F+ I+SKV+E Y P A++LQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYXAVNFPLRDGIDDESYEHIFQPIVSKVMEMYQPSAVILQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV FVK +NLP+L+ GGGGYT  +VAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVDFVKXYNLPMLLLGGGGYTIRSVAR 283


>gi|26342186|dbj|BAC34755.1| unnamed protein product [Mus musculus]
          Length = 304

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 180/290 (62%), Positives = 235/290 (81%), Gaps = 9/290 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct: 9   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct: 69  HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLL 293
           KV+E Y P A+VLQCGADSL+GDRLGCFNL++ G        K+F  PL+
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKG--------KQFTFPLV 289


>gi|262301863|gb|ACY43524.1| histone deacetylase [Eremocosta gigasella]
          Length = 281

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/282 (65%), Positives = 234/282 (82%), Gaps = 1/282 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ +ISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYESIFQPLISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +GDRLGCFNL++ GH  CV FVKK+NLPLL+ GGGGYT  NV
Sbjct: 240 SGDRLGCFNLTLRGHGRCVEFVKKYNLPLLLLGGGGYTIRNV 281


>gi|402853779|ref|XP_003891567.1| PREDICTED: histone deacetylase 1 [Papio anubis]
          Length = 450

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/340 (54%), Positives = 243/340 (71%), Gaps = 33/340 (9%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 7   TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++        
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVXXXXXXXX 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
                A                                KYH RVLYIDID+HHGDGVEEA
Sbjct: 127 XHPGTA--------------------------------KYHQRVLYIDIDIHHGDGVEEA 154

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 155 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 213

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct: 214 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 273

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I
Sbjct: 274 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 313


>gi|47229522|emb|CAF99510.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 441

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/275 (65%), Positives = 229/275 (83%), Gaps = 1/275 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L+++MEIYRPHKA   E+ +
Sbjct: 7   TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRRMEIYRPHKASGEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct: 67  YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG 277
           +KV+E Y P AIVLQCGADSL+GDRLGCFNL+I G
Sbjct: 246 AKVMEMYQPSAIVLQCGADSLSGDRLGCFNLTIKG 280


>gi|262301819|gb|ACY43502.1| histone deacetylase [Acanthocyclops vernalis]
          Length = 283

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 238/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEI+RPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKATQEEMTKFHSDDYIRFLRSIRPDNMGEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ +A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVASAVKLNKQAADIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMT SFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTASFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD SF  +F  IISKV+E+Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESFQNIFVPIISKVMESYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFN+++ GHA+CV F+KK+NLPL++ GGGGYT  NVAR
Sbjct: 240 TGDRLGCFNVTLKGHAKCVEFMKKYNLPLMLLGGGGYTIRNVAR 283


>gi|262301927|gb|ACY43556.1| histone deacetylase [Scutigera coleoptrata]
          Length = 279

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/278 (67%), Positives = 234/278 (84%), Gaps = 1/278 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  IISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYEQIFVPIISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +GDRLGCFNL+I GH++CV FVKK+NLPLL+ GGGGYT
Sbjct: 240 SGDRLGCFNLTIKGHSKCVEFVKKYNLPLLLLGGGGYT 277


>gi|395333317|gb|EJF65694.1| histone deacetylase RPD3 [Dichomitus squalens LYAD-421 SS1]
          Length = 554

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 182/347 (52%), Positives = 252/347 (72%), Gaps = 3/347 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S+ +++Y+YD DVG+  FG  HPMKP R+ +TH LV +Y++  KM + R  +A   ++ +
Sbjct: 2   SRRRVAYYYDPDVGAYSFGMTHPMKPQRMRITHELVSAYEMLPKMRVLRAKRASATDMTK 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV FL R+TP+          ++ +G+D P F+ +FEFC I AGG++ AA+RL  
Sbjct: 62  FHTDEYVHFLSRVTPENARQLTYNGNQFLVGDDNPAFDGVFEFCSISAGGSVAAAQRLME 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             CDIAINWAGGLHHAKK EASGFCY+ND+VLGILE+L+   RVLYIDID HHGDGVEEA
Sbjct: 122 GKCDIAINWAGGLHHAKKREASGFCYVNDIVLGILEMLRSVPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RVMT SFHK+G+ +FPGTG   + G  +G+ YA+N+PLKDGI D ++  +F+ +I
Sbjct: 182 FYTTNRVMTCSFHKYGE-YFPGTGTQHDKGRGKGRGYALNIPLKDGITDEAYRSVFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K+++ + P AIVLQCGADSL+GD+LGC NL++ GHA CVR+V+  N+PL++ GGGGYT 
Sbjct: 241 DKILDVFQPSAIVLQCGADSLSGDKLGCLNLTMHGHANCVRYVRSKNIPLMLLGGGGYTV 300

Query: 303 ENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           +NVAR WT ET   L  + ++   +P NEY ++F P   L +P  ++
Sbjct: 301 KNVARTWTYETACALGIENDIDLNLPWNEYFEWFGPRYRLEVPESNM 347


>gi|336368017|gb|EGN96361.1| hypothetical protein SERLA73DRAFT_170752 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336380747|gb|EGO21900.1| hypothetical protein SERLADRAFT_451909 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 574

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/360 (52%), Positives = 249/360 (69%), Gaps = 8/360 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVELA 61
           S+  +SY++   VG  ++G  HPMKPHRL +T+ LV+ Y L K++  IY P  A   EL 
Sbjct: 36  SRPIVSYYFPKGVGEHHYGERHPMKPHRLTLTNALVMGYGLDKQIHHIYNPRPATQAELE 95

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H  DY++FL R+TP  Q   R  +  +N  EDCP+F  +++FC++YAGG++  AR+L 
Sbjct: 96  AYHDHDYIDFLSRVTPRNQSEMRHLIDTFNCVEDCPIFAEMYDFCRMYAGGSLAGARKLC 155

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              CDIAINW+GGLHHAK+ EASGFCY+ND+VL ILELL+YH RVLYIDID+HHGDGVE 
Sbjct: 156 AGTCDIAINWSGGLHHAKRGEASGFCYVNDVVLAILELLRYHPRVLYIDIDIHHGDGVEL 215

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY ++RVMTVSFHK+   FFPGTG + + G   GK + +NVPL+DGIDD  +  +FKT+
Sbjct: 216 AFYHSNRVMTVSFHKYTGEFFPGTGKLDDNGAGIGKHFCLNVPLQDGIDDDMYLTIFKTV 275

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I   V  + P +IVLQCGADSL  DRLG FNLSI  H ECV FV+KFN+PLL+ GGGGYT
Sbjct: 276 IEDTVTAFRPTSIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKFNVPLLILGGGGYT 335

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
            +NV+RCW  ET +L+   +P+E+P   Y  +F        P  + R+ N +   S + I
Sbjct: 336 IKNVSRCWAYETAVLVGASIPDELPATVYDPFFRDSQWKLHPPLTGRVENQNSPASLQRI 395


>gi|262301919|gb|ACY43552.1| histone deacetylase [Phrynus marginemaculatus]
          Length = 284

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/285 (65%), Positives = 237/285 (83%), Gaps = 2/285 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMT SFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTASFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR-LFKTIISKVVETYAPGAIVLQCGADS 262
           GTGD+++IG  +GK+YA+N PL+DG+DD S+ + +F+ +ISKV+E Y P AIVLQCGADS
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGVDDDSYEQGVFQPLISKVMEMYQPSAIVLQCGADS 239

Query: 263 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           L+GDRLGCFNL++ GH +CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 LSGDRLGCFNLTLKGHGKCVEFVKKYNLPLLLLGGGGYTIRNVAR 284


>gi|262301895|gb|ACY43540.1| histone deacetylase [Leiobunum verrucosum]
          Length = 283

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/284 (66%), Positives = 236/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ +ISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYESIFQPLISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GH +CV FVKK+NLPLL  GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHGKCVDFVKKYNLPLLQLGGGGYTIRNVAR 283


>gi|449543349|gb|EMD34325.1| hypothetical protein CERSUDRAFT_55438, partial [Ceriporiopsis
           subvermispora B]
          Length = 547

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/356 (53%), Positives = 251/356 (70%), Gaps = 8/356 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVELAQFHS 65
           +SY++   +G+ ++G +HPMKPHRL +T+ LV+ Y L K++  I+ P  A   EL  +H 
Sbjct: 1   VSYYFPKGIGAQHYGEHHPMKPHRLTLTNALVMGYGLDKQIHHIFNPRPATQAELEVYHD 60

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+EFL R+TP  Q   R  +  +N  EDCP+F ++++FC++YAGG++ AAR+L     
Sbjct: 61  HDYIEFLSRVTPQNQADMRHLIDTFNCVEDCPIFADMYDFCRMYAGGSLAAARKLCAGTT 120

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL+YH RVLYIDID+HHGDGVE AFY 
Sbjct: 121 DIAINWSGGLHHAKKGEASGFCYVNDIVLAILELLRYHPRVLYIDIDIHHGDGVEFAFYH 180

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           +DRVMTVSFHK+   FFPGTG + + G   GK + +NVPL+DGIDD  +  +FKT+I   
Sbjct: 181 SDRVMTVSFHKYTGDFFPGTGKLDDNGAGLGKHFCLNVPLQDGIDDDMYLTIFKTVIEDT 240

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           V  + P +IVLQCGADSL  DRLG FNLSI  H ECV FV+KFN+PLLV GGGGYT +NV
Sbjct: 241 VTAFRPTSIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKFNVPLLVVGGGGYTIKNV 300

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
           +RCWT ET +L+   +P+E+P   Y  +F        P  + ++ N +   S + I
Sbjct: 301 SRCWTYETSVLVGAAVPDELPVTIYDSFFRDSQWKLHPPLTGKVDNQNSAASLQRI 356


>gi|323303279|gb|EGA57075.1| Rpd3p [Saccharomyces cerevisiae FostersB]
          Length = 373

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 183/314 (58%), Positives = 243/314 (77%), Gaps = 3/314 (0%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFC 106
           MEIYR   A   E+ QFH+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C
Sbjct: 1   MEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYC 60

Query: 107 QIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARV 166
            I  GG+++ A RLN   CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RV
Sbjct: 61  SISGGGSMEGAARLNRGKCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRV 120

Query: 167 LYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLK 226
           LYIDIDVHHGDGVEEAFY TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+
Sbjct: 121 LYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLR 179

Query: 227 DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVK 286
           DGIDD ++  +F+ +I K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK
Sbjct: 180 DGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVK 239

Query: 287 KFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPE--CSLRIPN 344
            F +P++V GGGGYT  NVAR W  ETG+L +  L  ++P NEY +Y+ P+   S+R  N
Sbjct: 240 SFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVXLDKDLPYNEYYEYYGPDYKLSVRPSN 299

Query: 345 GHIVCSFKEIDKFI 358
              V + + +DK +
Sbjct: 300 MFNVNTPEYLDKVM 313


>gi|149245829|ref|XP_001527387.1| histone deacetylase phd1 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146449781|gb|EDK44037.1| histone deacetylase phd1 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 440

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/339 (56%), Positives = 247/339 (72%), Gaps = 6/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +SY Y+ +V   ++G  HPMKP RL +T HLV+SY L++KM++Y P KA   EL QFHS
Sbjct: 37  NVSYHYNPEVSRYHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRKATKDELLQFHS 96

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DY+ FL  ITP+  ++L    L K+N+G+DCP+F+ ++++  IYAG ++DA R+L + +
Sbjct: 97  EDYINFLQTITPEACKNLDELTLAKFNIGDDCPIFDGMYDYLAIYAGASLDATRKLISGM 156

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+EAFY
Sbjct: 157 SDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQEAFY 216

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRVMTVSFHK+   FFPGTG V E G  +GK +AINVPL+DGIDD S+ RLFK I+  
Sbjct: 217 TTDRVMTVSFHKYNGEFFPGTGSVDETGIGKGKNFAINVPLRDGIDDESYVRLFKLIMEP 276

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV F+K F +P+LV GGGGYT  N
Sbjct: 277 LITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVNFIKSFGIPMLVVGGGGYTPRN 336

Query: 305 VARCWTVETGILLDTELPNEIPENEYI---KYFAPECSL 340
           V+R W  ET +L D  L ++IP   Y+    +F P+ SL
Sbjct: 337 VSRLWCYETSVLNDVTLNHKIP--NYLPTYDWFGPDFSL 373


>gi|392567133|gb|EIW60308.1| histone deacetylase RPD3 [Trametes versicolor FP-101664 SS1]
          Length = 555

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 182/347 (52%), Positives = 253/347 (72%), Gaps = 3/347 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD DVG+  +G  HPMKP R+  TH L+ +YD+  +M + R  +A    + +
Sbjct: 2   SKRRVTYYYDPDVGAFTYGLTHPMKPQRMRATHELLTAYDMLPRMHVLRAKRASAETMTR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FL R+TP+       + T++ +GED P F+ +FEFC I AGG++ AA RL N
Sbjct: 62  FHTDEYVQFLSRVTPENAPQLSYQGTRFLVGEDNPAFDGVFEFCSISAGGSLAAAHRLMN 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCY+ND+VL ILE+L+   RVLYIDID HHGDGVEEA
Sbjct: 122 GQTDIAINWAGGLHHAKKREASGFCYVNDIVLAILEMLRTVPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RVMT SFHKFG+ +FPGTG + + G  +G+ YA+NVPLKDG+ D ++  +F+ +I
Sbjct: 182 FYTTNRVMTCSFHKFGE-YFPGTGTLDDRGRGKGRGYAVNVPLKDGVTDEAYRSVFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K+++ + P AIVLQCGADSL+GD+LGC NL++ GHA CV++++K N+PL++ GGGGYT 
Sbjct: 241 DKILDVFQPSAIVLQCGADSLSGDKLGCLNLTMQGHASCVQYIRKKNIPLMLLGGGGYTV 300

Query: 303 ENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRIPNGHI 347
           +NVAR WT ET   L  + ++   +P NEY ++F P   L +P  ++
Sbjct: 301 KNVARTWTYETACALGIENDIDLNMPWNEYFEWFGPRYRLEVPASNM 347


>gi|242215843|ref|XP_002473733.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727128|gb|EED81057.1| predicted protein [Postia placenta Mad-698-R]
          Length = 405

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/364 (53%), Positives = 250/364 (68%), Gaps = 8/364 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVELA 61
           S+  +SY++   VG  ++G  HPMKPHRL +T+ LV  Y L K++  IY P  A   EL 
Sbjct: 2   SRPIVSYYFPKGVGEQHYGERHPMKPHRLTLTNTLVTGYGLDKQIHNIYNPRSATQAELE 61

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H  DY+EFL R+TP  Q   +  +  +N  EDCP+F ++++FC++YAG ++ AAR+L 
Sbjct: 62  VYHDHDYIEFLSRVTPQNQADMKHLIDTFNCVEDCPIFADMYDFCRMYAGASLAAARKLC 121

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINW+GGLHHAKK EASGFCY+ND+VL ILELL+YH RVLYIDID+HHGDGVE 
Sbjct: 122 AGTTDIAINWSGGLHHAKKGEASGFCYVNDIVLAILELLRYHPRVLYIDIDIHHGDGVEF 181

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY T+RVMTVSFHK+   FFPGTG + + G   GK + +NVPL+DGIDD  +  +FKT+
Sbjct: 182 AFYHTNRVMTVSFHKYTGDFFPGTGKLDDNGAGLGKHFCLNVPLQDGIDDNMYLTIFKTV 241

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I   V  + P AIVLQCGADSL  DRLG FNLSI  H ECV FV+KF +PLLV GGGGYT
Sbjct: 242 IEDTVTAFRPTAIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKFGVPLLVVGGGGYT 301

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
            +NV+RCWT ET +L+   +P+E+P   Y  +F        P  + ++ N + V S + I
Sbjct: 302 IKNVSRCWTYETSVLVGAAIPDELPVTIYDSFFRESQWKLHPPLTGKVENQNTVASLQRI 361

Query: 355 DKFI 358
              I
Sbjct: 362 TTGI 365


>gi|227202596|dbj|BAH56771.1| AT3G44680 [Arabidopsis thaliana]
          Length = 222

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/218 (85%), Positives = 203/218 (93%), Gaps = 2/218 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+
Sbjct: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           AQFHS DYVEFL RI P+ Q+LF  E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRL
Sbjct: 61  AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL 120

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           NN+LCDIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct: 121 NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKF 218
           EAFYFTDRVMTVSFHKFGD FFPGTGDVKE  + +G F
Sbjct: 181 EAFYFTDRVMTVSFHKFGDKFFPGTGDVKE--KEKGNF 216


>gi|157813970|gb|ABV81730.1| putative histone deacetylase 1 [Triops longicaudatus]
          Length = 283

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/284 (66%), Positives = 235/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  +IAINW GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQATEIAINWGGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD  +  +F  I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDEGYESIFVPIMSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GHA CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 TGDRLGCFNLTLKGHARCVEFVKKYNLPLLLVGGGGYTIRNVAR 283


>gi|388855251|emb|CCF51145.1| probable HOS2-putative histone deacetylase [Ustilago hordei]
          Length = 442

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/342 (55%), Positives = 251/342 (73%), Gaps = 2/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SY++   VG  ++G  HPMKP RL +T+ LVL+Y LHK M ++ P +A   EL  
Sbjct: 49  SKTRVSYYHPAGVGDFHYGERHPMKPARLTLTNRLVLAYGLHKHMSVFTPREATKEELEM 108

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH +DYV+FL  +TP T        TK+N  +DCPVF+ +++FC+ Y+G ++  ARRL  
Sbjct: 109 FHDSDYVDFLANVTPSTPP--SAAFTKFNFADDCPVFDGMYDFCKAYSGASLAGARRLAA 166

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDID+HHGDGV+EA
Sbjct: 167 GETDIAINWSGGLHHAKKFEASGFCYVNDIVLGIMELLRYHPRVLYIDIDIHHGDGVQEA 226

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RVMTVSFHK+G+ FFP TG++ EIG   GK + +NVPL+DG+DD+ +  LFK+++
Sbjct: 227 FYNSNRVMTVSFHKYGNDFFPCTGNIDEIGTGLGKHFCLNVPLQDGVDDSGYVALFKSVM 286

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             ++ T+ P ++VLQCGADSL  DRLGCFNLSI  H ECV+F+K F LPLLV GGGGYT 
Sbjct: 287 EPIITTFRPSSVVLQCGADSLGLDRLGCFNLSIAAHGECVQFIKSFGLPLLVLGGGGYTI 346

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
            NVARCW  ET +L    +P+ +P   Y+++FAP   L  P 
Sbjct: 347 RNVARCWAYETSVLTGCSIPDTLPSTPYMEFFAPTYRLHEPT 388


>gi|403216697|emb|CCK71193.1| hypothetical protein KNAG_0G01350 [Kazachstania naganishii CBS
           8797]
          Length = 451

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/337 (54%), Positives = 242/337 (71%), Gaps = 2/337 (0%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY ++  V   ++G  HPMKP RL +T HLV  Y +HK M++Y    A   EL +FH+
Sbjct: 28  RVSYHFNPKVSHYHYGVKHPMKPFRLMLTDHLVSGYGMHKVMDLYETRAATNDELTEFHT 87

Query: 66  ADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            DYV FL +++PD    L R  L K+N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct: 88  EDYVHFLQKVSPDNLGKLPRGTLEKFNIGDDCPIFQNLYDYATLYTGASLDATRKLINGQ 147

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK   SGFCY+ND+VL I+ LL+YH RVLYIDID+HHGDGV+EAFY
Sbjct: 148 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSIVNLLRYHPRVLYIDIDLHHGDGVQEAFY 207

Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
            TDRV T+SFHK+   FFPGTGD+ E G   G+ +A+NVPL+DGIDD S+  LFK++I  
Sbjct: 208 TTDRVYTISFHKYNGDFFPGTGDIDETGCDAGERFALNVPLEDGIDDDSYINLFKSVIGP 267

Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           ++  Y P  I+ QCGADSL  DRLGCFNL+I  H ECV+FVK F +P+LV GGGGYT  N
Sbjct: 268 LITAYNPTVIIQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGIPMLVVGGGGYTPRN 327

Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           V+R W  ETG+L D  LP ++PE   +  +F P+ SL
Sbjct: 328 VSRLWAYETGVLNDVILPKDLPEGLSFKNFFGPDYSL 364


>gi|393242517|gb|EJD50035.1| hypothetical protein AURDEDRAFT_161056 [Auricularia delicata
           TFB-10046 SS5]
          Length = 550

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/348 (53%), Positives = 253/348 (72%), Gaps = 3/348 (0%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           +SK ++SYFYD D+G++ +G N  MKP R+ MTHHL+ +Y + +KM + RP +A  +++ 
Sbjct: 4   QSKRRVSYFYDPDLGAMSYGWNAYMKPFRMRMTHHLIAAYGMLEKMHVLRPKRATALQMT 63

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            FH+ +Y++FL ++TP+T     Q     +   D P ++ LF+FC + +GG+I AA+ L 
Sbjct: 64  AFHTDEYIDFLTKVTPETCQELLQGRDFLSPELDNPPWDGLFDFCSVSSGGSISAAQHLT 123

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DIAINW+GGLHHAKK  ASGFCY+ND+VL ILELL+ + RV+YIDID HHGDGVEE
Sbjct: 124 SGAADIAINWSGGLHHAKKRSASGFCYVNDIVLCILELLRTYTRVVYIDIDCHHGDGVEE 183

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRV+TVSFHKFGD FFPGTG + + G   G  YA+NVPL+DG+ D SF + F+ I
Sbjct: 184 AFYGTDRVLTVSFHKFGD-FFPGTGALHDRGRGRGTGYAVNVPLQDGVSDASFAQAFEPI 242

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           ++++ E Y PGAIVLQCGADSLAGDRLGC NLS++GHA CV FV+  ++PL++ GGGGYT
Sbjct: 243 VTRICEWYRPGAIVLQCGADSLAGDRLGCLNLSMEGHARCVEFVRGLDVPLVLLGGGGYT 302

Query: 302 KENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIPNGHI 347
             NVAR WT ET   L  +  +P ++P NE+ ++F P   L +P  ++
Sbjct: 303 VRNVARTWTYETACALGVQDDIPRDLPHNEFFEWFGPRYRLEVPRSNM 350


>gi|262301871|gb|ACY43528.1| histone deacetylase [Eurypauropus spinosus]
          Length = 280

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/281 (68%), Positives = 235/281 (83%), Gaps = 1/281 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMAEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAGAVKLNKQAADIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD SF ++F  IISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSFEQIFVPIISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
            GDRLGCFN++I GHA+CV FVKK+NLPLLV GGGGYT  N
Sbjct: 240 TGDRLGCFNVTIRGHAKCVEFVKKYNLPLLVLGGGGYTIRN 280


>gi|392567972|gb|EIW61146.1| histone deacetylase [Trametes versicolor FP-101664 SS1]
          Length = 592

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/343 (54%), Positives = 247/343 (72%), Gaps = 5/343 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD DVGS  +G  H MKP R+ +TH LV +YD+  KM + R  +A    + +
Sbjct: 2   SKRRVAYYYDPDVGSYTYGLTHAMKPQRMRITHELVSAYDMLPKMHVLRAKRATAETMTR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y++FL ++TP+       + T++ +G+D P FE +FEF  I AGG+I AA+RL  
Sbjct: 62  FHTDEYIDFLAKVTPENARRLTYQGTRFLVGDDNPPFEGVFEFSSISAGGSIAAAKRLME 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCYIND+VLGILE+L+Y  RVLYIDID HHGDGVEEA
Sbjct: 122 GQADIAINWAGGLHHAKKREASGFCYINDIVLGILEMLRYAPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ FFPGTG + + G   G+ YA+NVPLKDGI D S+  +F+ +I
Sbjct: 182 FYTTDRVMTASFHKFGE-FFPGTGQITDRGRGPGRGYAVNVPLKDGITDESYKSIFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K+++ + P  IVLQCGADSL+GD+LG  NL++ GHA CV++V+  N+PL++ GGGGYT 
Sbjct: 241 DKIIDVFRPSGIVLQCGADSLSGDKLGGLNLTMQGHAHCVQYVRAKNIPLMLLGGGGYTV 300

Query: 303 ENVARCWTVETGILLDTEL---PNEIPENEYIKYFAPECSLRI 342
           +NVAR WT ET   L  E    PN +P NEY ++F P   L +
Sbjct: 301 KNVARAWTYETACALGIEQDIDPN-LPWNEYFEWFGPRYRLEV 342


>gi|345561258|gb|EGX44354.1| hypothetical protein AOL_s00193g82 [Arthrobotrys oligospora ATCC
           24927]
          Length = 467

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/340 (58%), Positives = 252/340 (74%), Gaps = 2/340 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+SY ++      +FG  HPMKP RL +T+ LVL Y +H  M++Y P +A   ELA 
Sbjct: 44  SKVKVSYHHNPAADEHHFGATHPMKPWRLTLTNQLVLGYGMHHLMDVYVPRRASEDELAD 103

Query: 63  FHSADYVEFLHRITPDTQHLFRQEL-TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DY+EFL R+TP     F  ++ TKYN+G+DCP+F+ +++F  +YAG ++D AR+L 
Sbjct: 104 FHSTDYLEFLRRVTPHNTDTFSSDMITKYNIGDDCPIFDGMYDFGSLYAGASLDGARKLI 163

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N   DIAINW+GGLHHAKK EASGFCYIND+VL IL+LL++H RVLYIDIDVHHGDGVE+
Sbjct: 164 NHQSDIAINWSGGLHHAKKSEASGFCYINDIVLAILQLLRHHPRVLYIDIDVHHGDGVEQ 223

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           AF+ TDRVMT+SFHK+    FFPGTG   +IG   GK YA+NVPLKDGIDD S+  LFK+
Sbjct: 224 AFWSTDRVMTLSFHKYDPKEFFPGTGGFDDIGAGNGKHYALNVPLKDGIDDNSYILLFKS 283

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           I   V+ +Y P AIVLQCGADSL  DRLGCFNL+I  H  CV F+K FNLPLLV GGGGY
Sbjct: 284 ISEAVLLSYRPSAIVLQCGADSLGCDRLGCFNLNIKAHGACVDFIKSFNLPLLVLGGGGY 343

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
           T  NV+R W  ETG+ L+ EL N++P ++Y  ++ P+ +L
Sbjct: 344 TPRNVSRLWAYETGLCLNLELDNKLPASQYADWWKPDYTL 383


>gi|308497150|ref|XP_003110762.1| hypothetical protein CRE_04702 [Caenorhabditis remanei]
 gi|308242642|gb|EFO86594.1| hypothetical protein CRE_04702 [Caenorhabditis remanei]
          Length = 446

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/358 (51%), Positives = 252/358 (70%), Gaps = 3/358 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD ++G+ Y+GP H MKPHR+ M H L+L+Y L++ + IYRP  A   ++ +
Sbjct: 11  SKRRVAYYYDSNIGNYYYGPGHVMKPHRIRMAHELILNYGLYRNLSIYRPTPASFKDITR 70

Query: 63  FHSADYVEFLHRITPDTQHLF--RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           FHS +YV +L     D    F    + +     +DCP+F+ L++FC++  GG++ AA +L
Sbjct: 71  FHSEEYVNYLKGANLDNVTSFGINNQFSSVLTNDDCPMFDGLYDFCRLSCGGSLAAAVKL 130

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N +  DIAINW GGLHHAKK EASGFCY ND+V+GILELLK+H RVLY+DID+HHGDGVE
Sbjct: 131 NKKKTDIAINWMGGLHHAKKSEASGFCYTNDIVIGILELLKHHKRVLYVDIDIHHGDGVE 190

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAF+ TDRVMTVSFH+ GD FFPGTGD+ +IG  +GK Y++NVPL DGI D ++  LF+ 
Sbjct: 191 EAFFTTDRVMTVSFHRHGD-FFPGTGDITDIGAGKGKLYSVNVPLADGIRDEAYKNLFEK 249

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++ +V+  + P A+VLQCGADSL  DRLG FNL++ GH  CV + +   LPL++ GGGGY
Sbjct: 250 VMDEVMYRFQPEAVVLQCGADSLNQDRLGRFNLTLKGHGNCVSYFRSRGLPLMLVGGGGY 309

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIVCSFKEIDKFI 358
           T  NVARCW  ET + +D E+ N IP N Y +YF P+  L I    +     ++DK I
Sbjct: 310 TPRNVARCWAYETALAVDMEVSNNIPFNNYYEYFGPDFQLHIDQRPVKDDNIDLDKKI 367


>gi|403347804|gb|EJY73335.1| Histone deacetylase [Oxytricha trifallax]
 gi|403375197|gb|EJY87569.1| Histone deacetylase [Oxytricha trifallax]
          Length = 381

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/316 (60%), Positives = 242/316 (76%), Gaps = 4/316 (1%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKP R+ MTH LVL+Y L++KM +Y+PHKA   E+  FHS DY+E L R  P+   L   
Sbjct: 1   MKPFRIKMTHQLVLAYGLYRKMSVYQPHKATDQEMIAFHSQDYIEHLKRAAPNL--LNNN 58

Query: 86  ELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 144
              K+N+GE DCP F  L+EF  I AGG++DAA +LN++  DI INWAGGLHHAKK EAS
Sbjct: 59  FEMKFNVGENDCPCFPGLYEFSSISAGGSLDAAIKLNHKSADICINWAGGLHHAKKMEAS 118

Query: 145 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 204
           GFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY T+RVMTVSFH++GD FFPG
Sbjct: 119 GFCYVNDIVLGILELLKYHNRVLYIDIDVHHGDGVEEAFYCTNRVMTVSFHRYGD-FFPG 177

Query: 205 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 264
           TGD+K+IG   G++YA+NVPL  GIDD S+  LFKTII +V + + P A+V+QCGADSLA
Sbjct: 178 TGDIKDIGYGNGQYYALNVPLNSGIDDDSYFNLFKTIIEEVRQRFRPDAVVIQCGADSLA 237

Query: 265 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 324
            DRLG +N ++ GH ECV+ +K + +P++V GGGGYT +NVARCW  ETGI L  +L N+
Sbjct: 238 YDRLGTYNTTLRGHGECVKHIKSWGIPMMVVGGGGYTIKNVARCWAYETGICLGLDLDNQ 297

Query: 325 IPENEYIKYFAPECSL 340
           IP N++ +++  +  L
Sbjct: 298 IPMNDFYEFYGNDYKL 313


>gi|403411876|emb|CCL98576.1| predicted protein [Fibroporia radiculosa]
          Length = 568

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 253/343 (73%), Gaps = 4/343 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD DVGS  +G +H MKP R+ +TH LV +Y++  KM + R ++A    + +
Sbjct: 2   SKRRVTYYYDPDVGSYTYGFSHMMKPQRMRLTHELVSAYNMLDKMHVLRANRASAETMTR 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKY-NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FH+ +YV+FL R+TP+TQ       ++Y  LG+D P FE ++EFC I AGG+I AA+RL+
Sbjct: 62  FHTDEYVQFLSRVTPETQEELTFNGSRYLVLGDDNPAFEGVYEFCSISAGGSIAAAQRLS 121

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DI INWAGGLHHAKK EASGFCYIND+VL ILELL+   RVLYIDID HHGDGVEE
Sbjct: 122 CGAADITINWAGGLHHAKKREASGFCYINDIVLCILELLRSFPRVLYIDIDCHHGDGVEE 181

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AF  TDRVMT SFHKFG+ +FPGTG +++ G  +G+ YA+NVPLKDGI D SF  +F+ +
Sbjct: 182 AFLTTDRVMTCSFHKFGE-YFPGTGSLEDRGRGKGRGYAVNVPLKDGITDESFKSVFEPV 240

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I K++E + P AIVLQCGADSLAGDRLGCFN+++ GHA C+++V+  N+PL++ GGGGYT
Sbjct: 241 IEKILEVFQPSAIVLQCGADSLAGDRLGCFNITMKGHANCLQYVRACNIPLVLLGGGGYT 300

Query: 302 KENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
            +NVAR WT ET   L  + E+   +P NEY ++F P   L +
Sbjct: 301 VKNVARAWTYETACALGIENEIDPNLPWNEYFEWFGPRYRLEV 343


>gi|384249770|gb|EIE23251.1| hypothetical protein COCSUDRAFT_66237 [Coccomyxa subellipsoidea
           C-169]
          Length = 583

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 182/312 (58%), Positives = 237/312 (75%), Gaps = 5/312 (1%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           M+PHR+ +TH LV +Y L+ KM ++RP      ++ +FH  DYV+FL+ +TPD Q  F  
Sbjct: 1   MRPHRVRLTHSLVSNYGLNSKMYVHRPQARSKEQIEEFHCDDYVDFLNSVTPDNQDEFIL 60

Query: 86  ELTKYNLGE----DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKC 141
           ++ ++NLG     DCPVF+ +F++C +Y+GG++  A  +N Q  DI +NWAGG+HHAKK 
Sbjct: 61  QMRRFNLGPVGEADCPVFDGMFDYCAVYSGGSVGGAMLMNEQKADICLNWAGGMHHAKKA 120

Query: 142 EASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLF 201
           EASGFCYIND+VLGILELLK H RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+GD F
Sbjct: 121 EASGFCYINDIVLGILELLKVHQRVLYVDIDIHHGDGVEEAFYLTDRVMTVSFHKYGD-F 179

Query: 202 FPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGAD 261
           FPGTG + ++G + GK Y++NVPL++G+DD S+  +F+ I+ KV+E Y PGAIV+  GAD
Sbjct: 180 FPGTGALGDVGYQGGKNYSVNVPLQEGMDDDSYKFVFEPIMQKVMEMYQPGAIVVCGGAD 239

Query: 262 SLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTEL 321
           SL+GDRLGCFNLS+ GHA C+ F+  F +P+LV GGGGYT  NVARCW  ETG LL  EL
Sbjct: 240 SLSGDRLGCFNLSLQGHAACMEFLAGFGVPMLVLGGGGYTMRNVARCWCYETGRLLGQEL 299

Query: 322 PNEIPENEYIKY 333
           P+E+PE     Y
Sbjct: 300 PDELPEEALRSY 311


>gi|307107179|gb|EFN55423.1| hypothetical protein CHLNCDRAFT_23482 [Chlorella variabilis]
          Length = 414

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/347 (53%), Positives = 250/347 (72%), Gaps = 7/347 (2%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
           + +  ++YF+D ++ +  +G  +PM+PHR  +T +LV  Y L +KM + RP      E+ 
Sbjct: 8   KPQRNVAYFFDEELCNYNYGGGNPMRPHRHRLTTNLVKGYQLDEKMRLIRPRARSREEIM 67

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLG----EDCPVFENLFEFCQIYAGGTIDAA 117
            FH+ DYV+FL  +TP+ Q  F  ++ ++NLG     DCPVF+ + E+ QIY  G++  A
Sbjct: 68  YFHADDYVDFLTSVTPENQEEFMMQMRRFNLGPVGEADCPVFDGMMEYFQIYTAGSVGGA 127

Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
             +N    D+ +NW+GG+HHAKK EASGFCYIND+VL ILELLK H RVLY+DID+HHGD
Sbjct: 128 SLINEGEADVVMNWSGGMHHAKKGEASGFCYINDIVLAILELLKVHQRVLYVDIDIHHGD 187

Query: 178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
           GVEEAFY T+RVMTVSFHK+GD FFPGTG + + G  EGK Y++NVPL++G+DD S+  +
Sbjct: 188 GVEEAFYTTNRVMTVSFHKYGD-FFPGTGALGDTGHAEGKLYSVNVPLQEGMDDESYKYV 246

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           ++ ++ KV+E Y PGAIV+ CGADSL+GD+LGCFNLSI GH+ C+ F+ +FN+PLLV GG
Sbjct: 247 YEPVMQKVMELYQPGAIVMCCGADSLSGDKLGCFNLSIQGHSACIEFMARFNVPLLVLGG 306

Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEY--IKYFAPECSLRI 342
           GGYT  NV+RCW  ETG LL  +LP+EIPE  Y    YF     LRI
Sbjct: 307 GGYTMRNVSRCWCYETGRLLGLDLPDEIPEAGYRDYDYFMDTHRLRI 353


>gi|323508206|emb|CBQ68077.1| probable HOS2-putative histone deacetylase [Sporisorium reilianum
           SRZ2]
          Length = 442

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/342 (55%), Positives = 249/342 (72%), Gaps = 2/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++SY++   VG  ++G  HPMKP RL +T+ LVL+Y LHK M ++ P +A   EL  
Sbjct: 49  SNPRVSYYHPAGVGDFHYGERHPMKPARLTLTNRLVLAYGLHKHMSVFTPREATKEELEM 108

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH +DYV+FL  +TP T        TK+N  +DCPVF+ +++FC+ Y+G ++  ARRL  
Sbjct: 109 FHDSDYVDFLANVTPSTPP--SAAFTKFNFADDCPVFDGMYDFCKAYSGASLAGARRLAA 166

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDID+HHGDGV+EA
Sbjct: 167 GETDIAINWSGGLHHAKKFEASGFCYVNDIVLGIMELLRYHPRVLYIDIDIHHGDGVQEA 226

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RVMTVSFHK+G+ FFP TG++ EIG   GK + +NVPL+DGIDD+ +  LFK+++
Sbjct: 227 FYNSNRVMTVSFHKYGNDFFPCTGNIDEIGTGLGKHFCLNVPLQDGIDDSGYVALFKSVM 286

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              + T+ P +IVLQCGADSL  DRLGCFNLSI  H ECV+F+K F LPLLV GGGGYT 
Sbjct: 287 EPCITTFRPSSIVLQCGADSLGLDRLGCFNLSIAAHGECVQFIKSFGLPLLVLGGGGYTI 346

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
            NVARCW  ET +L    +P+ +P   Y+++FAP   L  P 
Sbjct: 347 RNVARCWAYETSVLTGCSIPDTLPSTPYMEFFAPSYRLHEPT 388


>gi|443896569|dbj|GAC73913.1| histone deacetylase complex, catalytic component RPD3 [Pseudozyma
           antarctica T-34]
          Length = 442

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/342 (55%), Positives = 249/342 (72%), Gaps = 2/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++SY++   VG  ++G  HPMKP RL +T+ LVL+Y LHK M ++ P +A   EL  
Sbjct: 49  SNPRVSYYHPAGVGDFHYGERHPMKPARLTLTNRLVLAYGLHKHMNVFTPREATKEELEM 108

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH +DYV+FL  +TP T        TK+N  +DCPVF+ +++FC+ Y+G ++  ARRL  
Sbjct: 109 FHDSDYVDFLANVTPSTPP--SAAFTKFNFADDCPVFDGMYDFCKAYSGASLAGARRLAA 166

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDID+HHGDGV+EA
Sbjct: 167 GETDIAINWSGGLHHAKKFEASGFCYVNDIVLGIMELLRYHPRVLYIDIDIHHGDGVQEA 226

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RVMTVSFHK+G+ FFP TG++ EIG   GK + +NVPL+DGIDD+ +  LFK+++
Sbjct: 227 FYNSNRVMTVSFHKYGNDFFPCTGNIDEIGTGLGKHFCLNVPLQDGIDDSGYVALFKSVM 286

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              + T+ P +IVLQCGADSL  DRLGCFNLSI  H ECV+F+K F LPLLV GGGGYT 
Sbjct: 287 EPCITTFRPSSIVLQCGADSLGLDRLGCFNLSIAAHGECVQFIKSFGLPLLVLGGGGYTI 346

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
            NVARCW  ET +L    +P+ +P   Y+++FAP   L  P 
Sbjct: 347 RNVARCWAYETSVLTGCSIPDTLPSTPYMEFFAPSYRLHEPT 388


>gi|262301937|gb|ACY43561.1| histone deacetylase [Streptocephalus seali]
          Length = 281

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/282 (65%), Positives = 235/282 (83%), Gaps = 1/282 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEITKFHSDDYIRFLRSIRPDNMGEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+  +EFCQ+ AGG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGXYEFCQLSAGGSVAGAVKLNKQSTDIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+ ++F  I+SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYEQIFVPIMSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +GDRLGCFNL++ GH +CV F KK++LPLL+ GGGGYT  NV
Sbjct: 240 SGDRLGCFNLTLKGHGKCVEFFKKYSLPLLLLGGGGYTIRNV 281


>gi|374255991|gb|AEZ00857.1| putative histone deacyltylase protein, partial [Elaeis guineensis]
          Length = 291

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/292 (65%), Positives = 232/292 (79%), Gaps = 4/292 (1%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ M H+LV+ Y LH+ MEI RP  A   ++ +FHS DYV+FL  +   T    
Sbjct: 1   HPMKPHRIRMAHNLVVHYSLHRLMEICRPFPASADDIRRFHSDDYVDFLSALACPTPAPP 60

Query: 84  R---QELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 140
               + L ++N+GEDCPVF+ LF+FCQ  AGG+I AA ++N    DIAINWAGGLHHAKK
Sbjct: 61  PADPRLLKRFNVGEDCPVFDGLFQFCQASAGGSIGAAVKINRGDADIAINWAGGLHHAKK 120

Query: 141 CEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
           CEASGFCY+ND+VLGILELLK+H RVLY+DIDVHHGDGVEEAF+ TDRVMTVSFHK+GD 
Sbjct: 121 CEASGFCYVNDIVLGILELLKFHRRVLYVDIDVHHGDGVEEAFFTTDRVMTVSFHKYGD- 179

Query: 201 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 260
           FFPGTG +K+ G  +GK+YA+NVPL DG+DD SF  LF+ I+ KV+E Y P A+VLQCGA
Sbjct: 180 FFPGTGHIKDNGFGKGKYYALNVPLNDGMDDDSFRGLFRPIVQKVMEVYQPDAVVLQCGA 239

Query: 261 DSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           DSLAGDRLGCFNLS+ GHA+C+R++K FN+PL+V GGGGYT  NVARCW  E
Sbjct: 240 DSLAGDRLGCFNLSVKGHADCLRYLKSFNVPLMVLGGGGYTIRNVARCWCYE 291


>gi|262301855|gb|ACY43520.1| histone deacetylase [Dinothrombium pandorae]
          Length = 283

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/284 (65%), Positives = 236/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ M H+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMAHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIAINW+GGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAINWSGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD ++  +F+ +ISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDAYESIFQPLISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GH +CV FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHGKCVDFVKKYNLPLLLVGGGGYTIRNVAR 283


>gi|339254898|ref|XP_003372672.1| histone deacetylase Rpd3 protein [Trichinella spiralis]
 gi|316966872|gb|EFV51395.1| histone deacetylase Rpd3 protein [Trichinella spiralis]
          Length = 459

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 182/341 (53%), Positives = 247/341 (72%), Gaps = 20/341 (5%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
            +VG+ Y+G  HPMKP R+ M ++L+L+Y L++ MEIY+P  A   E+ QFHS DY+ FL
Sbjct: 21  SEVGNFYYGQGHPMKPQRIRMANNLILNYGLYRHMEIYKPTWATVDEIRQFHSEDYITFL 80

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             + P+    + + + ++N+GEDCPVFE               +A +LN + CDIAINWA
Sbjct: 81  ESVHPENLMDYNKHMQRFNVGEDCPVFEA--------------SACKLNRRACDIAINWA 126

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL IL LL++H R+LY+DID HHGDGVEEAF+ +DRVMTV
Sbjct: 127 GGLHHAKKYEASGFCYVNDIVLAILSLLRHHQRILYVDIDCHHGDGVEEAFFTSDRVMTV 186

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+K++G   GK+YA+N PL+DGI D S+  +F+ +I+KV+E++ P 
Sbjct: 187 SFHKYGE-YFPGTGDLKDVGAGRGKYYAVNFPLRDGITDDSYRSIFEPVITKVMESFQPS 245

Query: 253 AIVLQCGADSLAGDRLGCFNLS-----IDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            IV+QCGADSL GDRLGC NL+     + GH  CV F+++ NLP+L+ GGGGYT  NVAR
Sbjct: 246 LIVMQCGADSLTGDRLGCLNLTVKGTVVKGHGRCVDFIRRQNLPMLMLGGGGYTVRNVAR 305

Query: 308 CWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           CWT ET + + TE+ N++P N+Y +YF P+  L IP   I 
Sbjct: 306 CWTYETSVAIGTEISNDLPYNDYFEYFGPDFKLHIPPSAIT 346


>gi|389746785|gb|EIM87964.1| hypothetical protein STEHIDRAFT_146108 [Stereum hirsutum FP-91666
           SS1]
          Length = 618

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/342 (54%), Positives = 248/342 (72%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ ++SYFYD DVG   +G  H MKPHR+ +TH LV +Y +  KM I RP +A PV++  
Sbjct: 5   TRKRVSYFYDPDVGCYSYGLTHLMKPHRMRITHELVTAYGMLPKMNILRPKRATPVQMTA 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FLH++TP+T        +++ L +D P FE LFEFC I AGG+I AA ++ +
Sbjct: 65  FHTDEYVQFLHKVTPETAESLTHNNSRFLLLDDNPAFEGLFEFCSISAGGSIAAASQITS 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCYIND+VL ILELL+ + RVLYIDIDVHHGDGVEEA
Sbjct: 125 NSADIAINWSGGLHHAKKREASGFCYINDIVLCILELLRSYPRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY +DRVMT SFHK+G+ FFPGTG + + GE  GK YA+NVPL DG  D +F  +F T+I
Sbjct: 185 FYSSDRVMTCSFHKYGE-FFPGTGALHDRGEGRGKGYAVNVPLNDGCGDETFGNVFDTVI 243

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +++E + P AIVLQCG+DSLAGD+LG FN++  GH+ CV+F++  N+PL++ GGGGYT 
Sbjct: 244 DRILERFRPEAIVLQCGSDSLAGDKLGPFNMTHLGHSHCVQFIRSKNIPLILVGGGGYTV 303

Query: 303 ENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRI 342
           +N +R W  ET   L TE  +   +P N+Y ++F P   L +
Sbjct: 304 KNASRAWAYETACALGTEKDIDPALPWNDYFEWFGPRYRLEV 345


>gi|328849944|gb|EGF99116.1| hypothetical protein MELLADRAFT_118370 [Melampsora larici-populina
           98AG31]
          Length = 571

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/349 (54%), Positives = 242/349 (69%), Gaps = 9/349 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  +++Y++   VG  +FG  HPMKPHRL + +HLV  Y LH  ME + P  A   EL  
Sbjct: 46  SPARVAYYFPKGVGEYHFGKGHPMKPHRLTILNHLVAGYGLHNHMEFHSPRPASREELEV 105

Query: 63  FHSADYVEFLH----RITPDTQHLFRQELT--KYNLGEDCPVFENLFEFCQIYAGGTIDA 116
           FHSA Y++FL     R  PD +    Q L+   +N GEDCP+F+ ++EFC  YAG ++ A
Sbjct: 106 FHSAPYLDFLELNNIRTLPDQKVEGGQSLSLGPHNTGEDCPMFDGIYEFCSKYAGASLMA 165

Query: 117 ARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHG 176
           AR+LN+   DI INW+GGLHHAKK EASGFCY+ND+VL I+ELL+ H RVLYIDID+HHG
Sbjct: 166 ARKLNSGTSDITINWSGGLHHAKKSEASGFCYVNDIVLAIIELLRIHPRVLYIDIDIHHG 225

Query: 177 DGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR 236
           DGV+EAFY ++RV TVSFHK+   FFPGTG + EIG   GK ++ N+PL DGID+ S+  
Sbjct: 226 DGVQEAFYLSNRVCTVSFHKYNGEFFPGTGTIDEIGYGLGKNFSFNLPLSDGIDNESYIN 285

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF++ I  ++  + P AIVLQCGADSL GDRLG FN+SI  H ECVRF+K F +PLLV G
Sbjct: 286 LFRSTIEPIMNCFKPSAIVLQCGADSLGGDRLGGFNISIAAHGECVRFMKSFRIPLLVLG 345

Query: 297 GGGYTKENVARCWTVETGILL-DT--ELPNEIPENEYIKYFAPECSLRI 342
           GGGYT  NVARCWT ET +L+ DT   +PN +P   Y   F  E  L +
Sbjct: 346 GGGYTPRNVARCWTYETSVLVSDTCPTIPNTLPSTPYDSIFKDEPKLHV 394


>gi|406604020|emb|CCH44482.1| histone deacetylase HOS2 [Wickerhamomyces ciferrii]
          Length = 444

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/342 (57%), Positives = 251/342 (73%), Gaps = 8/342 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY Y+  V   ++G  HPMKP RL +T HLV+ Y L++KM++Y P  A   EL +FHS 
Sbjct: 29  VSYHYNPKVSEYHYGVKHPMKPFRLMLTDHLVIGYKLYEKMDLYIPKAASKDELLEFHSE 88

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL ++TPD    +   L ++N+G+DCPVF+  +++  IY G ++DA ++L +   D
Sbjct: 89  DYIDFLQKVTPDNVSKYSNLLKEFNIGDDCPVFDGFYDYSSIYTGASLDATQKLISGASD 148

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINW+GGLHHAKK E SGFCY+ND+VL IL+LL+YH RVLYIDID+HHGDGV+EAFY T
Sbjct: 149 IAINWSGGLHHAKKSEPSGFCYVNDIVLSILDLLRYHPRVLYIDIDLHHGDGVQEAFYTT 208

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+  LFFPGTG+V E G   GK YAINVPL DGIDD S+ RLFK+++  ++
Sbjct: 209 DRVMTVSFHKYNGLFFPGTGNVDETGVGRGKHYAINVPLNDGIDDESYIRLFKSVMDPLI 268

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + P  IV QCGADSL GDRLGCFNL+I  H ECV+F+K F LPLLV GGGGYT  NV+
Sbjct: 269 TNFKPTVIVQQCGADSLGGDRLGCFNLNIKAHGECVKFIKSFGLPLLVLGGGGYTPRNVS 328

Query: 307 RCWTVETGIL----LDTELPNEIPENEYIKYFAPECSLRIPN 344
           R W  ET IL    LD++LP+ +P   +  +F P+CSL  PN
Sbjct: 329 RLWCYETSILTDVTLDSKLPDVLP---FRNFFNPDCSLH-PN 366


>gi|410041916|ref|XP_003951328.1| PREDICTED: histone deacetylase 1-like [Pan troglodytes]
          Length = 417

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 174/266 (65%), Positives = 222/266 (83%), Gaps = 1/266 (0%)

Query: 83  FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCE 142
           + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK E
Sbjct: 22  YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSE 81

Query: 143 ASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFF 202
           ASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +F
Sbjct: 82  ASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YF 140

Query: 203 PGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADS 262
           PGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DS
Sbjct: 141 PGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDS 200

Query: 263 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELP 322
           L+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+P
Sbjct: 201 LSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIP 260

Query: 323 NEIPENEYIKYFAPECSLRIPNGHIV 348
           NE+P N+Y +YF P+  L I   ++ 
Sbjct: 261 NELPYNDYFEYFGPDFKLHISPSNMT 286


>gi|58265630|ref|XP_569971.1| histone deacetylase 1-1 (hd1) [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57226203|gb|AAW42664.1| histone deacetylase 1-1 (hd1), putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 659

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/374 (49%), Positives = 252/374 (67%), Gaps = 38/374 (10%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLH--------------------- 44
           +++Y+YD DVG+ +FG  HPMKPHR+ MTH+LV++Y L                      
Sbjct: 21  RVAYYYDHDVGNYHFGLGHPMKPHRIRMTHNLVVNYGLADDYEAMEEEGRRKVNARMGME 80

Query: 45  ----------------KKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELT 88
                           K+M+I+RP +A   ++ +FH+ +Y+E L  + P+         +
Sbjct: 81  NDEARWVNAEMRGSRAKRMQIFRPRRATKTDMTRFHTDEYIELLESVLPENADALTGNRS 140

Query: 89  KYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 148
           +   G DCP  E +FEF  I AGG+I AA +LN  + DIAINWAGGLHHAKK EASGFCY
Sbjct: 141 RGLTGSDCPAVEGIFEFSSISAGGSIGAAEKLNEGIADIAINWAGGLHHAKKTEASGFCY 200

Query: 149 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 208
           +ND+VLGILELL+ ++RVLYIDIDVHHGDGVEEAFY TDRVMT SFH FG+ FFPGTG +
Sbjct: 201 VNDIVLGILELLRVNSRVLYIDIDVHHGDGVEEAFYSTDRVMTCSFHLFGN-FFPGTGTL 259

Query: 209 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 268
           K++G  +GK YA+NVPL++GI D  F  +FK +I++++E Y P  +VLQ GADS++GD+L
Sbjct: 260 KDVGLGKGKGYAVNVPLREGITDEGFHSIFKPVIAEIMEHYRPCVVVLQGGADSMSGDKL 319

Query: 269 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 328
           G  NLS  GHAEC +F++ F++PL++ GGGGYT +NVAR WT ET I    EL  ++P N
Sbjct: 320 GRLNLSDKGHAECAKFLRTFSVPLMLLGGGGYTTKNVARAWTRETAIACGQELSEDLPSN 379

Query: 329 EYIKYFAPECSLRI 342
           +Y++Y+ P   L +
Sbjct: 380 QYMEYYGPRYKLEV 393


>gi|340505093|gb|EGR31460.1| hypothetical protein IMG5_109090 [Ichthyophthirius multifiliis]
          Length = 424

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 181/345 (52%), Positives = 246/345 (71%), Gaps = 8/345 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPH--KAYPVE---- 59
            ++Y++D  +G   +   HPMKP R+ MT  L+ SY+L ++M  Y       Y  E    
Sbjct: 12  NVAYYFDESIGCFNYAQCHPMKPLRVAMTDTLIKSYNLDQQMNHYDRDYVNQYIREVNEK 71

Query: 60  -LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAAR 118
            L  FHS +Y+  +  +TP  ++ +  +L ++N G+DCPV + L+++C  Y+ G+I  A 
Sbjct: 72  MLTNFHSDEYINLIKNVTPFNKNDYEDQLYRFNFGDDCPVLDRLYDYCLTYSAGSIAGAN 131

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
            L N+  DIAINW+GGLHHAK+ EASGFCYIND VL ILELLK + RVLYIDID+HHGDG
Sbjct: 132 LLANKKVDIAINWSGGLHHAKQSEASGFCYINDCVLAILELLKVYQRVLYIDIDIHHGDG 191

Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
           VEEAFY TDRVMT SFHK+ D +FPGTG +++IG ++GK+YA+N PL +G+DD  F  +F
Sbjct: 192 VEEAFYLTDRVMTCSFHKYKD-YFPGTGHIEDIGFQKGKYYAVNFPLNEGLDDEQFIYIF 250

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K ++++++  Y P A+VLQCGADSL+GDRLGCFNLSI GH EC RF+K F +PL++ GGG
Sbjct: 251 KPVLTQIMNQYRPEAVVLQCGADSLSGDRLGCFNLSIKGHGECTRFMKSFGVPLMLLGGG 310

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV RCW  ET I ++ E+ +E+PEN+Y+ YF PE  L +P
Sbjct: 311 GYTLRNVPRCWVYETSIAVNQEIQDEMPENDYLHYFGPEYKLHMP 355


>gi|389583095|dbj|GAB65831.1| histone deacetylase, partial [Plasmodium cynomolgi strain B]
          Length = 421

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/328 (61%), Positives = 249/328 (75%), Gaps = 10/328 (3%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKP R+ MTH L++SY+L+K ME+YRPHK+   EL  FH  +YV+FL  I+ +    F  
Sbjct: 1   MKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNELTLFHDYEYVDFLSSISMENYREFTY 60

Query: 86  ELTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
           +L ++N+GE  DCPVF+ LF+F Q  AG +ID A +LN+   DI +NW+GGLHHAK  EA
Sbjct: 61  QLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAAKLNHHCADICVNWSGGLHHAKMSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCYIND+VLGILELLKYHARV+YIDIDVHHGDGVEEAFY T RVMTVSFHKFGD +FP
Sbjct: 121 SGFCYINDIVLGILELLKYHARVMYIDIDVHHGDGVEEAFYVTHRVMTVSFHKFGD-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+ +IG   GK+Y++NVPL DGI D +F  LFK +I K V+TY PGAI+LQCGADSL
Sbjct: 180 GTGDITDIGVHHGKYYSVNVPLNDGITDDAFVDLFKVVIDKCVQTYKPGAIILQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDT--EL 321
            GDRLG FNL+I GHA CV  V+ +NLPLLV GGGGYT  NV+RCW  ETG++L+   E+
Sbjct: 240 TGDRLGRFNLTIKGHARCVEHVRSYNLPLLVLGGGGYTIRNVSRCWAYETGVVLNKHHEM 299

Query: 322 PNEIPENEYIKYFAPECSLR-----IPN 344
           P++I  N+Y  Y+AP+  L      IPN
Sbjct: 300 PDQISLNDYYDYYAPDFQLHLQPSSIPN 327


>gi|393216237|gb|EJD01728.1| histone deacetylase complex, catalytic component RPD3 [Fomitiporia
           mediterranea MF3/22]
          Length = 416

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/358 (51%), Positives = 257/358 (71%), Gaps = 4/358 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD DVG   +G  H MKPHR+ MTH LV +Y +  KM++ RP +A    +  
Sbjct: 2   SKRRVAYYYDNDVGLFSYGTWHAMKPHRIRMTHDLVSTYGMLDKMQVLRPRRATSENMTA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS +Y+ FL+R+TPD+      + T++ LGED P FE +FEFC I AGG+IDAA+R+ +
Sbjct: 62  FHSDEYIHFLNRVTPDSALELTGQGTRFLLGEDNPAFEGVFEFCSISAGGSIDAAKRVAD 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCY+ND+VL ILELL+ + RVLYIDID+HHGDGVEEA
Sbjct: 122 GSADIAINWAGGLHHAKKSEASGFCYVNDIVLCILELLRTYPRVLYIDIDIHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRV T SFHKFG+ +FPGTG V + G+ +G  Y +NVPL+DG+D+ SF  +F+ I+
Sbjct: 182 FYTTDRVFTCSFHKFGE-YFPGTGHVDDYGKGKGLGYCVNVPLRDGMDNESFKSVFEPIV 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            ++++ Y P  +VLQCGADSLAGD+LG FNLS++GHA CV++++   +PL++ GGGGYT 
Sbjct: 241 QRILDWYRPSVVVLQCGADSLAGDKLGVFNLSMEGHANCVQYLRDSGIPLVLLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIPNGHIVCSFKEIDKFI 358
           +NV R W  ET   L+ E  +   +P  E+ ++F P   L + + +++     ID ++
Sbjct: 301 KNVCRTWAYETACALNIEDTIDRNLPWTEHFEWFGPRYQLEVLSNNMM-DMNPIDGYL 357


>gi|169806168|ref|XP_001827829.1| deacetylase [Enterocytozoon bieneusi H348]
 gi|161779277|gb|EDQ31300.1| deacetylase [Enterocytozoon bieneusi H348]
          Length = 400

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 181/339 (53%), Positives = 248/339 (73%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  I Y +D ++ +  +   HPMKP R+ MT+ L+++Y+L   M+I +P KA   +L  F
Sbjct: 2   KKSILYLHDDEIQNYNYARAHPMKPLRVSMTYSLMINYELFHHMDILKPTKASYNDLLDF 61

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS+DY++FL  I+ +       ++ K+N+ +DCP+F  LF++C+  AG +I  A+++N +
Sbjct: 62  HSSDYIDFLSSISGELTSEMVNDINKFNVKDDCPIFPGLFDYCRSTAGASILGAKKINTK 121

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
                INW+GGLHHAK+ EASGFCY+ND+VLGILELLK H RVLYIDIDVHHGDGVEEAF
Sbjct: 122 EYHTVINWSGGLHHAKRSEASGFCYVNDIVLGILELLKVHDRVLYIDIDVHHGDGVEEAF 181

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMT+SFHK+GD FFPGTG + + G  +G+ YA+NVPLKDG+DD S+  +FK I+ 
Sbjct: 182 YLTDRVMTLSFHKYGD-FFPGTGRLDDKGLEKGENYAVNVPLKDGMDDESYEMIFKPIVE 240

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           +++  + P A+VLQCGAD L+GD+LGCFNL+  GH  CV +VK FNLP++V GGGGYT E
Sbjct: 241 RIMNVFKPSAVVLQCGADCLSGDKLGCFNLTEKGHGMCVEYVKSFNLPMMVLGGGGYTIE 300

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NVAR WT +TGI+   +L  +IP NE++ Y+ P   L+I
Sbjct: 301 NVARAWTYDTGIVCGIKLNEDIPYNEFMDYYCPTYKLKI 339


>gi|390598549|gb|EIN07947.1| hypothetical protein PUNSTDRAFT_135464 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 602

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/362 (51%), Positives = 250/362 (69%), Gaps = 10/362 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVELA 61
           S+  +SY++   VG  ++G  HPMKPHRL +T+ LVL Y L K++  IY P +A   EL 
Sbjct: 36  SRPIVSYYFPKGVGEHHYGDRHPMKPHRLTLTNELVLGYGLDKQIHNIYNPPRASREELL 95

Query: 62  QFHSADYVEFLHRITPDTQHL--FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
            +H  DY++FL R+TP  Q+    +  +  +N  EDCP+F  +++FC++YAG ++ AAR+
Sbjct: 96  GYHDPDYIDFLSRVTPQNQNQNNMKHLIENHNCTEDCPIFAEMYDFCRMYAGSSLAAARK 155

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           L     DIAINW+GGLHHAK+ EASGFCY+ND+VL ILE+LKYH RVLYIDID+HHGDGV
Sbjct: 156 LCAGTTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILEILKYHPRVLYIDIDIHHGDGV 215

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           E AFY T+RVMT+SFHK+   FFP TG + + G   GK++A+NVPL DGI D  +  +FK
Sbjct: 216 ELAFYHTNRVMTLSFHKYNGDFFPATGKLDDNGAELGKYFALNVPLSDGITDEMYLEIFK 275

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           T++   V  + P  IVLQCGADSL  DRLG FNLSI  H ECV FV+K+N+PLLV GGGG
Sbjct: 276 TVVDDTVTAFRPSVIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKYNVPLLVLGGGG 335

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFK 352
           Y  +NV+RCWT ET +L+  E+P+E+P   Y  +F        P  + R+ N +   S +
Sbjct: 336 YNIKNVSRCWTYETSVLVGAEIPDELPRTVYDSFFRDSQWKLHPPLTGRVDNMNTPQSLQ 395

Query: 353 EI 354
           +I
Sbjct: 396 KI 397


>gi|242786943|ref|XP_002480904.1| histone deacetylase HosA [Talaromyces stipitatus ATCC 10500]
 gi|218721051|gb|EED20470.1| histone deacetylase HosA [Talaromyces stipitatus ATCC 10500]
          Length = 498

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 10/347 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY  +  V + +FG +HPMKP RL +T  LVL+Y +H  M++Y    A   E+A+FH+ 
Sbjct: 44  VSYHANPAVEAHHFGSSHPMKPWRLVLTKELVLAYGMHHAMDLYLSRAATFEEMAEFHTE 103

Query: 67  DYVEFLHRITPDTQHLFRQE--LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           DY+EFL ++ P       Q   +  YN+G+DCP+F+ LF +C +YAGGT+DAAR+L N  
Sbjct: 104 DYLEFLRQVIPADMEAAEQSDRIASYNIGDDCPIFDGLFNYCSLYAGGTVDAARKLVNNQ 163

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK EASGFCY+ND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF+
Sbjct: 164 ADIAINWSGGLHHAKKTEASGFCYVNDIVLGILQLLRFHPRVMYIDIDVHHGDGVEQAFW 223

Query: 185 FTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLFK 239
            TDRV+TVSFHK+  D FFPGTG +   G       G  +AINVPL DGI+D  + +LFK
Sbjct: 224 STDRVLTVSFHKYDKDNFFPGTGALDSNGPSHPLNPGSRHAINVPLNDGIEDGDYLQLFK 283

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +IS  VETY PGAIVLQCGADSL  DRLGCFNL++ GH  CV + K   LP+LV GGGG
Sbjct: 284 AVISSCVETYNPGAIVLQCGADSLGCDRLGCFNLNVTGHGACVAYTKTLGLPMLVVGGGG 343

Query: 300 YTKENVARCWTVETGILLDT--ELPNEIPEN-EYIKYFAPECSLRIP 343
           YT  NV+R W  ET IL+D   ++   IP+   +   FAP+ SL  P
Sbjct: 344 YTPRNVSRAWAHETSILIDAADKIDPNIPDTVTFRNQFAPDYSLFPP 390


>gi|157813966|gb|ABV81728.1| putative histone deacetylase 1 [Speleonectes tulumensis]
          Length = 283

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/284 (65%), Positives = 234/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  +IA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSGGGSVAGAVKLNKQAAEIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I+SKV+E Y P A+VLQ GADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFVPILSKVMEMYQPSAVVLQNGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA C  FVKK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHARCAEFVKKYNLPLLMLGGGGYTIRNVAR 283


>gi|322788145|gb|EFZ13927.1| hypothetical protein SINV_02893 [Solenopsis invicta]
          Length = 304

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/325 (57%), Positives = 239/325 (73%), Gaps = 35/325 (10%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y +++KMEIY                                 
Sbjct: 3   HPMKPHRIRMTHNLLLNYGIYRKMEIY--------------------------------V 30

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
           R  L  +N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  +I INW+GGLHHAKK EA
Sbjct: 31  RTFL--FNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWSGGLHHAKKSEA 88

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 89  SGFCYVNDIVLAILELLKYHQRVLYIDIDVHHGDGVEEAFYATDRVMTVSFHKYGE-YFP 147

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+ ++G  +GK+YA+NVPL+DG+DD S+  +F  +ISKV+E + P A+VLQCGADSL
Sbjct: 148 GTGDLHDVGAGKGKYYAVNVPLRDGMDDESYESIFVPVISKVMEMFQPSAVVLQCGADSL 207

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 323
            GDRLGCFNL++ GH +CV FVK++NLP L+ GGGGYT  NV+RCWT ET + L  E+ N
Sbjct: 208 TGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMLGGGGYTIRNVSRCWTYETSVALGCEIDN 267

Query: 324 EIPENEYIKYFAPECSLRIPNGHIV 348
           E+P N+Y +YF P+  L I   +I+
Sbjct: 268 ELPYNDYFEYFGPDFKLHISPSNIL 292


>gi|262301879|gb|ACY43532.1| histone deacetylase [Heterometrus spinifer]
          Length = 279

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 181/278 (65%), Positives = 232/278 (83%), Gaps = 1/278 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD ++  +F+ +ISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDEAYEGIFQPLISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +GDRLGCFNL++ GH +CV FVKK+ +PLL+ GGGGYT
Sbjct: 240 SGDRLGCFNLTLKGHGKCVEFVKKYQMPLLLLGGGGYT 277


>gi|393220735|gb|EJD06221.1| hypothetical protein FOMMEDRAFT_166468 [Fomitiporia mediterranea
           MF3/22]
          Length = 646

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/363 (51%), Positives = 254/363 (69%), Gaps = 7/363 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVELA 61
           S+  +SY++   VG  ++G  HPMKPHRL +T+ LV+ Y L K++   + P  A   EL 
Sbjct: 35  SRPIVSYYFPKGVGEHHYGERHPMKPHRLTLTNALVIGYGLDKQVHHFFNPKPATREELE 94

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H ++Y++FL R+TP  Q+  +  +  +N  EDCP+F ++++F ++YAGG++  AR+L 
Sbjct: 95  AYHDSEYIDFLSRVTPRNQNEMKHLIDTFNCVEDCPIFADMYDFTRMYAGGSLAGARKLC 154

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIAINW+GGLHHAK+ EASGFCYIND+VL ILELL+YH RVLYIDID+HHGDGVE 
Sbjct: 155 AGTTDIAINWSGGLHHAKRGEASGFCYINDIVLAILELLRYHPRVLYIDIDIHHGDGVEL 214

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AF+ ++RVMTVSFHK+   FFPGTG + + G   GK +A+NVPL DGIDD ++  +F+T+
Sbjct: 215 AFWNSNRVMTVSFHKYTGDFFPGTGRLDDNGGGLGKHFALNVPLLDGIDDENYLSVFRTV 274

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I   V  + P AIVLQCGADSL  DRLG FNLSI GH ECV FV+KF +PLLV GGGGYT
Sbjct: 275 IDDTVTAFRPSAIVLQCGADSLGCDRLGAFNLSIAGHGECVNFVRKFGVPLLVLGGGGYT 334

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFA------PECSLRIPNGHIVCSFKEID 355
             NV+RCWT ET +L+  E+P+ +P+  Y  +FA      P  + RI N +   + + I 
Sbjct: 335 VHNVSRCWTYETSVLVGCEVPDALPQTPYDAWFADDYTLHPTLAGRIDNQNTPAALQRIT 394

Query: 356 KFI 358
           + I
Sbjct: 395 RSI 397


>gi|409046594|gb|EKM56074.1| hypothetical protein PHACADRAFT_96102 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 592

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/360 (51%), Positives = 247/360 (68%), Gaps = 8/360 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVELA 61
           S+  +SY+    VG+ ++G  HPMKPHRL +T+ LV  Y L K++  IY P  A   EL 
Sbjct: 40  SRPIVSYYSPKGVGAQHYGERHPMKPHRLTLTNALVFGYGLDKQIHHIYDPRPATQAELE 99

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H  DYVEFL R+TP  Q   +  + ++N  EDCP+F ++++FC++YAG ++ AAR+L 
Sbjct: 100 AYHDRDYVEFLGRVTPQNQGEMKHLIDQFNCVEDCPIFADMYDFCKLYAGASLAAARKLC 159

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIA+NW+GGLHHAKK EASGFCY+ND+VL ILELL++H RVLYIDID+HHGDGVE 
Sbjct: 160 AGTTDIAVNWSGGLHHAKKAEASGFCYVNDIVLAILELLRFHPRVLYIDIDIHHGDGVEF 219

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY ++RVMT+SFHK+   FFPGTG + + G   GK + +NVPL+DGIDD  +   FKT+
Sbjct: 220 AFYNSNRVMTLSFHKYTGDFFPGTGKLDDNGAGLGKHFCLNVPLQDGIDDDMYLTTFKTV 279

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +   V  + P AIVLQCGADSL  DRLG FNLSI  H ECV FV+K+ +PLLV GGGGYT
Sbjct: 280 VDDTVTAFRPSAIVLQCGADSLGCDRLGAFNLSIAAHGECVNFVRKYGVPLLVVGGGGYT 339

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
            +NV+RCWT ET +L+   +P+ +P   Y  +F        P  + R+ N +   S + I
Sbjct: 340 IKNVSRCWTYETAVLVGASIPDSLPVTIYDSFFRESQWKLHPPLTGRVENQNTPASLQRI 399


>gi|321253561|ref|XP_003192774.1| histone deacetylase 1-1 (hd1) [Cryptococcus gattii WM276]
 gi|317459243|gb|ADV20987.1| Histone deacetylase 1-1 (hd1), putative [Cryptococcus gattii WM276]
          Length = 614

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/374 (50%), Positives = 249/374 (66%), Gaps = 38/374 (10%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLH--------------------- 44
           +++Y+YD DVG+ +FG  HPMKPHR+ MTH+LV++Y L                      
Sbjct: 22  RVAYYYDHDVGNYHFGLGHPMKPHRIRMTHNLVVNYGLADDYETMEEEGKRKVNAQMGME 81

Query: 45  ----------------KKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELT 88
                           K M+I+RP +A   ++ +FH+ +Y+E L  + P+         +
Sbjct: 82  NDEARWVNAELRGSRGKWMQIFRPRRATKTDMTRFHTDEYIELLESVLPENVDALTGNGS 141

Query: 89  KYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 148
           +   G DCP  E +FEF  I AGG+I AA +LN    DIAINWAGGLHHAKK EASGFCY
Sbjct: 142 RGLTGSDCPAVEGIFEFSSISAGGSIGAAEKLNEGTADIAINWAGGLHHAKKTEASGFCY 201

Query: 149 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 208
           +ND+VLGILELL+ ++RVLYIDIDVHHGDGVEEAFY TDRVMT SFH FG+ FFPGTG +
Sbjct: 202 VNDIVLGILELLRVNSRVLYIDIDVHHGDGVEEAFYSTDRVMTCSFHLFGN-FFPGTGTL 260

Query: 209 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 268
           K+ G  +GK YA+NVPL++GI D  F  +FK +I++++E Y P  IVLQ GADS++GD+L
Sbjct: 261 KDTGLGKGKGYAVNVPLREGITDQGFHSIFKPVIAEIMEHYRPSVIVLQGGADSMSGDKL 320

Query: 269 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 328
           G  NLS  GHAEC RF++ F++PL++ GGGGYT +NVAR WT ET I    EL  ++P N
Sbjct: 321 GRLNLSDKGHAECARFLRTFSVPLMLLGGGGYTTKNVARAWTRETAIACGQELSEDLPSN 380

Query: 329 EYIKYFAPECSLRI 342
           +Y++Y+ P   L +
Sbjct: 381 QYMEYYGPRYKLEV 394


>gi|262301859|gb|ACY43522.1| histone deacetylase [Eurytemora affinis]
          Length = 283

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/284 (65%), Positives = 237/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KME+YRPHKA   E+ +FHS DY++FL  I PD    +
Sbjct: 1   HPMKPHRMRMTHNLLLNYGLYRKMEVYRPHKATQDEMTKFHSDDYIKFLRSIRPDNMGEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            + L ++N+GEDCPVF+ L+EFCQ+ +GG++ +A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  SKLLQRFNVGEDCPVFDGLYEFCQLSSGGSVASAVKLNKQAADIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG   GK+Y++N PL+DGIDD S+  LF  ++S+V+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGRGKYYSLNFPLRDGIDDMSYEGLFVPVMSRVMELYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV F+K++ LPL++ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFMKRYKLPLMLLGGGGYTIRNVAR 283


>gi|390603655|gb|EIN13047.1| histone deacetylase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 517

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/350 (53%), Positives = 248/350 (70%), Gaps = 8/350 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD DVG+  +G  H MKPHR+ + H LV +Y +  KM I +P +  P ++  
Sbjct: 2   SKRRVAYYYDPDVGAYTYGLGHCMKPHRIRIAHELVTAYGMLDKMHILKPSRCPPEKMTA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL R+TP+ +     + T++ +G D P FE +FEFC I AGG++ AA R+ +
Sbjct: 62  FHTDEYIHFLSRVTPEKERELTYDGTRFLVGYDNPAFEGVFEFCSISAGGSLAAAERITS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIA+NWAGGLHHAKK EASGFCYIND+VL ILELL++  RVLYIDID HHGDGVEEA
Sbjct: 122 DSADIAVNWAGGLHHAKKREASGFCYINDIVLCILELLRFFPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+GD FFPGTG   + G  +GK Y +N+PLKDGI D S+  +F+ +I
Sbjct: 182 FYTTDRVMTCSFHKYGD-FFPGTGTQNDKGTGKGKNYTVNIPLKDGITDESYKSIFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           ++++E Y P  +VLQCGADSL+GD+LGCFNLS+ GHA CV+F++K N+P ++ GGGGYT 
Sbjct: 241 TRILEVYRPSVVVLQCGADSLSGDKLGCFNLSMHGHANCVQFMRKQNIPTVLLGGGGYTV 300

Query: 303 ENVARCWTVETGILLDTELPNEI-----PENEYIKYFAPECSLRIPNGHI 347
           +NVA+ W  ET   L  E  NEI     P NEY  +F P   L +   ++
Sbjct: 301 KNVAKTWAYETACALGIE--NEIDQTAMPWNEYFDWFGPRYRLEVATSNM 348


>gi|212543537|ref|XP_002151923.1| histone deacetylase HosA [Talaromyces marneffei ATCC 18224]
 gi|210066830|gb|EEA20923.1| histone deacetylase HosA [Talaromyces marneffei ATCC 18224]
          Length = 499

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/347 (54%), Positives = 249/347 (71%), Gaps = 10/347 (2%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY  +  V + +FG +HPMKP RL +T  LVL+Y +H  M++Y    A   E+A+FH+A
Sbjct: 44  VSYHANPAVEAHHFGQSHPMKPWRLVLTKELVLAYGMHHAMDLYLSRAATFEEMAEFHTA 103

Query: 67  DYVEFLHRITPDTQHLFRQE--LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           DY++FL ++ P       Q   +  YN+G+DCP+F+ LF++C +YAGGT+DAAR+L N  
Sbjct: 104 DYLDFLRQVIPADMEAAEQSDRIASYNIGDDCPIFDGLFDYCSLYAGGTVDAARKLINNQ 163

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            DIAINW+GGLHHAKK EASGFCY+ND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF+
Sbjct: 164 ADIAINWSGGLHHAKKTEASGFCYVNDIVLGILQLLRFHPRVMYIDIDVHHGDGVEQAFW 223

Query: 185 FTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLFK 239
            TDRV+TVSFHK+  D FFPGTG ++  G       G  +AINVPL DGI+D ++ +L+K
Sbjct: 224 STDRVLTVSFHKYDKDNFFPGTGGLESNGPAHPLNPGSKHAINVPLNDGIEDDAYLQLYK 283

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            ++S  VETY PGAIVLQCGADSL  DRLGCFNL++ GH  CV + K   LP+LV GGGG
Sbjct: 284 DVVSSCVETYQPGAIVLQCGADSLGCDRLGCFNLNVTGHGACVAYTKTLGLPMLVVGGGG 343

Query: 300 YTKENVARCWTVETGILLDT--ELPNEIPEN-EYIKYFAPECSLRIP 343
           YT  NV+R W  ET IL+D   ++   IP+   +  +F P+ SL  P
Sbjct: 344 YTPRNVSRAWAHETSILIDAVDKVDPNIPDTVTFRNHFGPDYSLFPP 390


>gi|262301933|gb|ACY43559.1| histone deacetylase [Stenochrus portoricensis]
          Length = 284

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/285 (65%), Positives = 236/285 (82%), Gaps = 2/285 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIA+NWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAVNWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMT SFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTASFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR-LFKTIISKVVETYAPGAIVLQCGADS 262
           GTGD+++IG  +GK+YA+N PL+DG+DD S+   +F+ +ISKV+E Y P A+VLQCGADS
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGVDDDSYEHGVFQPLISKVMEMYQPSAVVLQCGADS 239

Query: 263 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           L+GDRLGCFNL++ GH +CV FVKK+NLPLLV GGGGYT  NVAR
Sbjct: 240 LSGDRLGCFNLTLKGHGKCVDFVKKYNLPLLVLGGGGYTIRNVAR 284


>gi|262301905|gb|ACY43545.1| histone deacetylase [Milnesium tardigradum]
          Length = 283

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/284 (64%), Positives = 236/284 (83%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+LVL+Y L++KMEIYRPHKA   E+++FHS DY+ FL  + PD    +
Sbjct: 1   HPMKPHRIRMTHNLVLNYGLYRKMEIYRPHKATFEEMSKFHSDDYIRFLKSVKPDNLQSY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            + + ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN +  DIA+NWAGGLHHAKK EA
Sbjct: 61  NRFMQQFNVGEDCPVFDGLYEFCQLSAGGSVAGAIKLNKKQTDIAVNWAGGLHHAKKAEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLY+DID+HHGDGVEEAF+ TDRV+TVS+HK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYVDIDIHHGDGVEEAFFTTDRVLTVSYHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+ ++G  +GK YA+N PLKDGIDD S+  +F  ++ KV+E Y PGA+VLQCGADSL
Sbjct: 180 GTGDLTDVGAGKGKHYAVNFPLKDGIDDESYEEIFVPVMRKVMEFYDPGAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GHA+CV F+K+FN PLL+ GGGGYT +NVAR
Sbjct: 240 TGDRLGCFNLTVKGHAKCVEFMKRFNKPLLLLGGGGYTIKNVAR 283


>gi|385302784|gb|EIF46896.1| histone deacetylase [Dekkera bruxellensis AWRI1499]
          Length = 437

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 182/296 (61%), Positives = 229/296 (77%), Gaps = 3/296 (1%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFC 106
           MEIYR   A   E+ QFHS +Y++FL R TPD   LF +E  K+N+G+DCPVF+ LFEFC
Sbjct: 1   MEIYRAKPATREEMCQFHSDEYIDFLARATPDNLDLFNKE--KFNVGDDCPVFDGLFEFC 58

Query: 107 QIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARV 166
            I  GG+++ A RLN   CD+AIN+AGGLHHAKK EASGFCY+ND+ LGILELL+YH RV
Sbjct: 59  SISGGGSMEGAARLNRGKCDVAINYAGGLHHAKKSEASGFCYVNDIALGILELLRYHPRV 118

Query: 167 LYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLK 226
           LYIDIDVHHGDGVEEAFY TDRVMT SFHK+G+ FFPGTG++ +IG  +GK YA+NVPL+
Sbjct: 119 LYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELHDIGVGKGKHYAVNVPLR 177

Query: 227 DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVK 286
           DGIDD ++  +F+ +I  ++E Y P AI LQCG DSL+GDRLGCFNLS+ GHA CV +VK
Sbjct: 178 DGIDDVTYRSIFEPLIKTIIEWYQPSAIXLQCGGDSLSGDRLGCFNLSMRGHANCVNYVK 237

Query: 287 KFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            F +PL++ GGGGYT  NVAR WT ETG++  T L  ++P N+Y +Y+ P+  L +
Sbjct: 238 GFGIPLMIVGGGGYTIRNVARTWTFETGLINQTILGPDLPFNDYYEYYGPDYKLDV 293


>gi|262301877|gb|ACY43531.1| histone deacetylase [Hutchinsoniella macracantha]
          Length = 283

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 182/284 (64%), Positives = 233/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMK  R+ MTH+L L+Y  ++K E YRPHKA   E+ +FHS DY+ FL  I PD    +
Sbjct: 1   HPMKXQRIRMTHNLXLNYGXYRKXEXYRPHKATADEMTRFHSDDYIRFLRSIRPDNMSDY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG+I  A +LN Q  ++AINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSIAGAVKLNKQATEVAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VLGILELLKYH RVLY+DID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLGILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  ++SKV+ETY P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFVPVMSKVMETYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV F+K++N+PLL+ GGGGYT  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFMKRYNVPLLLLGGGGYTIRNVAR 283


>gi|302681241|ref|XP_003030302.1| hypothetical protein SCHCODRAFT_77889 [Schizophyllum commune H4-8]
 gi|300103993|gb|EFI95399.1| hypothetical protein SCHCODRAFT_77889 [Schizophyllum commune H4-8]
          Length = 554

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 181/343 (52%), Positives = 248/343 (72%), Gaps = 5/343 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YD DVG+  +G  HPMKPHR+ + H L+ +Y +  KM + +  +A P  +  
Sbjct: 2   SKRRVTYYYDPDVGAYTYGLGHPMKPHRIRVAHELISAYGMLDKMHVLKAKRATPERMTA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV+FL++++P+T        +++ +G+D P FE +FE+CQ  AGG+I AA R+ +
Sbjct: 62  FHTDEYVDFLNKVSPETVRELTYNGSRFLVGDDNPAFEGVFEYCQTSAGGSIAAANRIAS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCYIND+VLGI+ELL+ + RVLY+DID HHGDGVEEA
Sbjct: 122 GATDIAINWAGGLHHAKKREASGFCYINDIVLGIIELLRTYPRVLYVDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHK+G+ +FPGTG  ++ G   G  YA+NVP KDG+ D S   +F+ II
Sbjct: 182 FYTTDRVMTCSFHKYGE-YFPGTGTQEDTGVGRGTGYAVNVPFKDGLTDESLASVFEPII 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E + P A+VLQCG+DSL+GD+LGCFNL++ GHA CV+F++  N+PL++ GGGGYT 
Sbjct: 241 DKILEVFQPSAVVLQCGSDSLSGDKLGCFNLTMQGHAHCVQFLRSKNIPLILLGGGGYTV 300

Query: 303 ENVARCWTVETGILL---DTELPNEIPENEYIKYFAPECSLRI 342
           +NV R W  ET   L   DT  PN +P NEY ++F P   L +
Sbjct: 301 KNVGRTWAYETACALGIEDTIDPN-LPWNEYFEWFGPRYRLEV 342


>gi|21637259|gb|AAM70418.1|AF512725_1 histone deacetylase [Arabidopsis thaliana]
          Length = 206

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 181/206 (87%), Positives = 195/206 (94%)

Query: 23  NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHL 82
           NHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+AQFHS DYVEFL RI P+ Q+L
Sbjct: 1   NHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENQNL 60

Query: 83  FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCE 142
           F  E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRLNN+LCDIAINWAGGLHHAKKC+
Sbjct: 61  FPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCD 120

Query: 143 ASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFF 202
           ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD FF
Sbjct: 121 ASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFF 180

Query: 203 PGTGDVKEIGEREGKFYAINVPLKDG 228
           PGTGDVKEIGEREGKFYAINVPLKDG
Sbjct: 181 PGTGDVKEIGEREGKFYAINVPLKDG 206


>gi|350585862|ref|XP_003127820.3| PREDICTED: histone deacetylase 1-like [Sus scrofa]
          Length = 397

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/267 (65%), Positives = 220/267 (82%), Gaps = 1/267 (0%)

Query: 82  LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKC 141
           + R+     N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN Q  DIA+NWAGGLHHAKK 
Sbjct: 1   MSRECWDAVNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKS 60

Query: 142 EASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLF 201
           EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +
Sbjct: 61  EASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-Y 119

Query: 202 FPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGAD 261
           FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+D
Sbjct: 120 FPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSD 179

Query: 262 SLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTEL 321
           SL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+
Sbjct: 180 SLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEI 239

Query: 322 PNEIPENEYIKYFAPECSLRIPNGHIV 348
           PNE+P N+Y +YF P+  L I   ++ 
Sbjct: 240 PNELPYNDYFEYFGPDFKLHISPSNMT 266


>gi|262301881|gb|ACY43533.1| histone deacetylase [Idiogaryops pumilis]
          Length = 284

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/285 (64%), Positives = 234/285 (82%), Gaps = 2/285 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ M H+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y+ FL  I PD    +
Sbjct: 1   HPMKPHRIRMAHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDEYIRFLRSIRPDBMTEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQATDIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMT SFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTCSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSF-TRLFKTIISKVVETYAPGAIVLQCGADS 262
           GTGD+++IG  +GK+YA+N PL+DGIDD S+   +F  +I+KV+E Y P A+VLQCGADS
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYHENVFVPLITKVMEMYQPSAVVLQCGADS 239

Query: 263 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           L+GDRLGCFNL++ GH +CV FVKK+N+PLL+ GGGGYT  NVAR
Sbjct: 240 LSGDRLGCFNLTLRGHGKCVEFVKKYNIPLLLLGGGGYTIRNVAR 284


>gi|403295552|ref|XP_003938702.1| PREDICTED: histone deacetylase 2 [Saimiri boliviensis boliviensis]
          Length = 334

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 171/263 (65%), Positives = 221/263 (84%), Gaps = 1/263 (0%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L+KKMEIYRPHKA   E+ ++HS +Y++FL
Sbjct: 43  GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYKKMEIYRPHKATAEEMTKYHSDEYIKFL 102

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWA
Sbjct: 103 RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWA 162

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
           GGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTV
Sbjct: 163 GGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTV 222

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P 
Sbjct: 223 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPS 281

Query: 253 AIVLQCGADSLAGDRLGCFNLSI 275
           A+VLQCGADSL+GDRLGCFNL++
Sbjct: 282 AVVLQCGADSLSGDRLGCFNLTV 304


>gi|262301833|gb|ACY43509.1| histone deacetylase [Amblyomma sp. 'Amb2']
          Length = 280

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 181/281 (64%), Positives = 231/281 (82%), Gaps = 1/281 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL  I PD    +
Sbjct: 1   HPMKPHRMRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFLRSIRPDNMSEY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            +++ ++N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EA
Sbjct: 61  NKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQATDIAINWAGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND+VL ILELLKYH RVLYID+D+HHGDGVEEAFY TDRVMT SFHK+G+ +FP
Sbjct: 121 SGFCYVNDIVLAILELLKYHQRVLYIDVDIHHGDGVEEAFYTTDRVMTCSFHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ +ISKV+E Y P A+VLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFQPLISKVMEMYQPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
           +GDRLGCFNL++ GH +C  FV+++NLPLL  GGGGYT  N
Sbjct: 240 SGDRLGCFNLTLKGHGKCAEFVRRYNLPLLQLGGGGYTIRN 280


>gi|402226574|gb|EJU06634.1| histone deacetylase-like protein HD1 [Dacryopinax sp. DJM-731 SS1]
          Length = 444

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/339 (53%), Positives = 243/339 (71%), Gaps = 4/339 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SYFYD DVG   +   HPMKPHR+ M H L+ SY +  +M++ RP +A  ++L +FH+
Sbjct: 12  RVSYFYDPDVGGFAYPYQHPMKPHRMRMAHALIGSYGMLGRMQVVRPRRANELDLTRFHT 71

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y++FL  IT +  ++      K+   +DCP ++ LF+F  + AG +I AA  L     
Sbjct: 72  DEYIQFLKTITAE-NYMEWTANKKFCQTDDCPPWDGLFDFATLTAGSSISAAHSLVTGHS 130

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAI WAGGLHHAK+ EASGFCY+ND+VLGILELL+ HARVLY+DID+HHGDGVEEAFY 
Sbjct: 131 DIAIAWAGGLHHAKRTEASGFCYVNDIVLGILELLRVHARVLYVDIDIHHGDGVEEAFYT 190

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRVMT SFHKFGD FFPGTG V +IG+  GK YA+N P +DG  D  F   FK ++ K+
Sbjct: 191 TDRVMTCSFHKFGD-FFPGTGTVSDIGKGRGKGYAVNFPCRDGFTDEKFVEYFKAVVGKI 249

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E + PGA+VLQ GADSLAGD+LG FNLS+ GHA C  +V+ FN+PL++ GGGGYT +NV
Sbjct: 250 MEWFRPGAVVLQGGADSLAGDKLGVFNLSMHGHAACAAYVRTFNVPLMMVGGGGYTVKNV 309

Query: 306 ARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
           AR WT ET + +   T++  ++P NEY+++F P   L +
Sbjct: 310 ARTWTYETAVAIGCQTQISPDLPNNEYLEWFGPRYKLEV 348


>gi|258575991|ref|XP_002542177.1| histone deacetylase phd1 [Uncinocarpus reesii 1704]
 gi|237902443|gb|EEP76844.1| histone deacetylase phd1 [Uncinocarpus reesii 1704]
          Length = 492

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/348 (54%), Positives = 245/348 (70%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG NHPMKP RL +T  LVL+Y +H  M++Y    A   ELA+FHS
Sbjct: 42  RVSWHANPAVEPHHFGSNHPMKPWRLTLTKQLVLAYGMHHAMDLYLSRSATYEELAEFHS 101

Query: 66  ADYVEFLHRITPDTQHLFRQ--ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           +DY+EFL ++ P       Q   L ++N G+DCPVF+ LF +C +YAGGT+DAAR+L N 
Sbjct: 102 SDYLEFLTQVLPADMESTSQVDTLARFNFGDDCPVFDGLFNYCSLYAGGTLDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCY+ND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKAEASGFCYVNDIVLGILQLLRIHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  + FFPGTG +   G       G  +++N+PL DG++D+ +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKENFFPGTGPLDSTGPSHPLNPGAHHSLNIPLNDGVEDSDYVALF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K+II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GGG
Sbjct: 282 KSIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVVGGG 341

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I LD E  L   +PE+ ++  +F P+C+L  P
Sbjct: 342 GYTPRNVSRLWAYETAICLDAENDLNPVLPESLKFRNHFRPDCTLFPP 389


>gi|262301911|gb|ACY43548.1| histone deacetylase [Orchesella imitari]
          Length = 283

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/284 (64%), Positives = 232/284 (81%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ MTH+L+L+Y L++KMEIYRPHK+   ++ +FH  DY+ FL  I PD     
Sbjct: 1   HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKSTFEDMTKFHREDYIRFLRSIRPDNMTEH 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
            ++L ++N+G DCPVF+ L++FCQ+ AGG++  A +LN +  DIAINW GGLHHAKK EA
Sbjct: 61  NKQLQRFNVGNDCPVFDGLYDFCQLSAGGSVAGAIKLNKKATDIAINWXGGLHHAKKSEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFC++ND+VL I ELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ FFP
Sbjct: 121 SGFCFVNDIVLAIXELLKYHXRVLYIDIDIHHGDGVEEAFYITDRVMTVSFHKYGE-FFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+++IG  +GK+YA+N PL+DGIDD S+  +F  I+SKV+ETY P AIVLQCGADSL
Sbjct: 180 GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYQSIFIPIMSKVMETYQPSAIVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           +GDRLGCFNL++ GHA+CV F+ K+NLPLL+ GGGG T  NVAR
Sbjct: 240 SGDRLGCFNLTLKGHAKCVEFMMKYNLPLLLLGGGGXTIRNVAR 283


>gi|344231261|gb|EGV63143.1| hypothetical protein CANTEDRAFT_130666 [Candida tenuis ATCC 10573]
          Length = 449

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/343 (57%), Positives = 252/343 (73%), Gaps = 8/343 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S   +SY Y+ +V   ++GP+HPMKP RL +T HLV+SY L+++M++Y P +A   EL Q
Sbjct: 25  SPPNVSYHYNPEVTRYHYGPHHPMKPFRLLLTDHLVISYKLYEQMDLYTPRRATKDELLQ 84

Query: 63  FHSADYVEFLHRITPD-TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           FHS DYV FL  +TP  T  L  + L ++N+GEDCPVF+ ++++  IYAG ++DA R+L 
Sbjct: 85  FHSEDYVNFLESVTPQATGKLAEKTLAQFNIGEDCPVFDGMYDYSAIYAGASLDATRKLI 144

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+E
Sbjct: 145 SGQSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIMNLLRVHPRVMYIDIDLHHGDGVQE 204

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY +DRVMTVSFHK+   FFPGTG + E G   GK YAINVPLKDGIDD S+ RLFK+I
Sbjct: 205 AFYTSDRVMTVSFHKYNGEFFPGTGAMDERGIGRGKNYAINVPLKDGIDDDSYIRLFKSI 264

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           +  ++  + P AIV QCGADSL  DRLGCFNL+I  H ECV+F+K F LPLLV GGGGYT
Sbjct: 265 MEPLITKFQPTAIVQQCGADSLGFDRLGCFNLNIRAHGECVKFIKSFGLPLLVLGGGGYT 324

Query: 302 KENVARCWTVETGIL----LDTELPNEIPENEYIKYFAPECSL 340
             NV+R W  ET IL    LD ++PN +P  +   +FAP+ SL
Sbjct: 325 PRNVSRLWCYETSILNDVSLDDKIPNYLPTYD---WFAPDYSL 364


>gi|403175418|ref|XP_003334238.2| histone deacetylase HOS2 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|375171593|gb|EFP89819.2| histone deacetylase HOS2 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 553

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/349 (51%), Positives = 239/349 (68%), Gaps = 10/349 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++SY++   VG  +FG  HPMKPHRL + +HLV  Y LH  ME + P  A   EL  
Sbjct: 48  SPSRVSYYFPKGVGDYHFGKGHPMKPHRLTILNHLVAGYGLHHHMEYHSPRLANREELGS 107

Query: 63  FHSADYVEFLHRIT------PDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDA 116
           FHS+ Y++FL R        P + +       ++N GEDCP+F+ +++FC+ YAG ++ A
Sbjct: 108 FHSSSYLDFLERNNIRLGEDPKSNNPTSNS-GEHNTGEDCPMFDGIYDFCRQYAGASLMA 166

Query: 117 ARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHG 176
           +R+LN+   DI INW+GGLHHAKK EASGFCY+ND+V+GI+ELL+ H RVLYIDID+HHG
Sbjct: 167 SRKLNSGTSDITINWSGGLHHAKKSEASGFCYVNDIVIGIIELLRIHPRVLYIDIDIHHG 226

Query: 177 DGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR 236
           DGV+EAFY ++RV TVSFHK+   FFPGTG + E G   GK ++ N+PL DGID+ S+  
Sbjct: 227 DGVQEAFYLSNRVCTVSFHKYNGEFFPGTGTIDEFGYGLGKNFSFNLPLSDGIDNESYVN 286

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF++++  ++ T+ P  IVLQCGADSL GDRLG FN+SI  H ECVRF+K F +PL+V G
Sbjct: 287 LFRSVMEPIITTFRPSVIVLQCGADSLGGDRLGGFNISIAAHGECVRFIKAFRIPLMVLG 346

Query: 297 GGGYTKENVARCWTVETGILLDTELP---NEIPENEYIKYFAPECSLRI 342
           GGGYT  NVARCWT ET +L+    P   N +P   Y   F  E  L +
Sbjct: 347 GGGYTPRNVARCWTYETSLLVSDTCPSISNHLPSTPYDSIFKDEPRLHV 395


>gi|402225842|gb|EJU05903.1| histone deacetylase [Dacryopinax sp. DJM-731 SS1]
          Length = 501

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/343 (57%), Positives = 247/343 (72%), Gaps = 2/343 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYR-PHKAYPVELA 61
           S+  + YF+   VG  ++G  HPMKPHRL +T+ LV+ Y LH+ ++ +  P  A   +L 
Sbjct: 8   SRRSVDYFFTKGVGDYHYGEGHPMKPHRLSITNSLVIGYGLHEHIDNFLCPQPATVSQLE 67

Query: 62  QFHSADYVEFLHRITP-DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            FH +DYV+FL ++TP + + +FR      N  EDCPVF  LFEFC+ YAG +I AARRL
Sbjct: 68  TFHDSDYVDFLSKLTPRNVEEMFRLHGDMVNSSEDCPVFTGLFEFCKQYAGASILAARRL 127

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
             + CD+AINW GGLHHAKK  ASGFCY+ND+VL I  LL+ +ARVLYIDID+HHGDGVE
Sbjct: 128 GEESCDVAINWTGGLHHAKKRGASGFCYVNDIVLAIQHLLRKYARVLYIDIDIHHGDGVE 187

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY T+RV+TVSFHK+   FFPGTG + + G   GK +A+NVPLKDGIDD S+  +F+ 
Sbjct: 188 EAFYNTNRVLTVSFHKYNGEFFPGTGKLDDNGSGLGKHFALNVPLKDGIDDESYVTMFRA 247

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           ++  V+ T+ P AIVLQCGADSL  DRLG FNLSI  H ECVRFVK F+LPLLV GGGGY
Sbjct: 248 VMEPVIATFRPSAIVLQCGADSLGCDRLGAFNLSIKAHGECVRFVKSFHLPLLVLGGGGY 307

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           T  NVARCWT ET +LL  +LPN++P  +Y +YF  +  L  P
Sbjct: 308 TVSNVARCWTYETSVLLGVQLPNQLPSTKYDRYFLNDRRLHPP 350


>gi|145238532|ref|XP_001391913.1| histone deacetylase HOS2 [Aspergillus niger CBS 513.88]
 gi|89521423|gb|ABD76555.1| conserved hypothetical protein [Aspergillus niger]
 gi|134076402|emb|CAK48220.1| unnamed protein product [Aspergillus niger]
 gi|350635878|gb|EHA24239.1| hypothetical protein ASPNIDRAFT_39718 [Aspergillus niger ATCC 1015]
          Length = 484

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/348 (54%), Positives = 248/348 (71%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   ELA FH 
Sbjct: 41  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARAATYEELADFHK 100

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           +DY++FL ++ P D ++  + E + ++N G+DCP+F+ L+ +C +YAGGTIDAAR+L N 
Sbjct: 101 SDYLDFLQQVVPGDMENPEQSENIARFNFGDDCPIFDGLYNYCSLYAGGTIDAARKLCNN 160

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IA+NW+GGLHHAKK EASGFCYIND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF
Sbjct: 161 QSEIAVNWSGGLHHAKKAEASGFCYINDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAF 220

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGIDD S+ +LF
Sbjct: 221 WSTDRVLTVSFHKYDKDNFFPGTGGLDSTGPTHPLNPGAHHSVNVPLHDGIDDESYIQLF 280

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + ++   VE Y PGAIVLQCGADSL  DRLGCFNL++  H  CV FVK FNLPLLV GGG
Sbjct: 281 RDVVGSCVEVYRPGAIVLQCGADSLGCDRLGCFNLNVAAHGACVAFVKTFNLPLLVVGGG 340

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL+D +  +   IPE   +  +F P+ SL  P
Sbjct: 341 GYTPRNVSRAWAHETSILIDAQDTIDPHIPETVTFRNHFGPDFSLFPP 388


>gi|358368850|dbj|GAA85466.1| histone deacetylase HosA [Aspergillus kawachii IFO 4308]
          Length = 484

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/348 (54%), Positives = 248/348 (71%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   ELA FH 
Sbjct: 41  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARAATYEELADFHK 100

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           +DY++FL ++ P D ++  + E + ++N G+DCP+F+ L+ +C +YAGGTIDAAR+L N 
Sbjct: 101 SDYLDFLKQVVPGDMENPEQSENIARFNFGDDCPIFDGLYNYCSLYAGGTIDAARKLCNN 160

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IA+NW+GGLHHAKK EASGFCYIND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF
Sbjct: 161 QSEIAVNWSGGLHHAKKAEASGFCYINDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAF 220

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGIDD S+ +LF
Sbjct: 221 WSTDRVLTVSFHKYDKDNFFPGTGGLDSTGPTHPLNPGAHHSVNVPLHDGIDDESYIQLF 280

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + ++   VE Y PGAIVLQCGADSL  DRLGCFNL++  H  CV FVK FNLPLLV GGG
Sbjct: 281 RDVVGSCVEVYRPGAIVLQCGADSLGCDRLGCFNLNVAAHGACVAFVKTFNLPLLVVGGG 340

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL+D +  +   IPE   +  +F P+ SL  P
Sbjct: 341 GYTPRNVSRAWAHETSILIDAQDTIDPHIPETVTFRNHFGPDFSLFPP 388


>gi|157813968|gb|ABV81729.1| putative histone deacetylase 1 [Thulinius stephaniae]
          Length = 283

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/284 (63%), Positives = 235/284 (82%), Gaps = 1/284 (0%)

Query: 24  HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           HPMKPHR+ M H+LVL+Y L++KME+YRPHKA   E+++FHS +YV FL  + PD    +
Sbjct: 1   HPMKPHRIRMAHNLVLNYGLYRKMEVYRPHKATFEEMSKFHSDEYVRFLKTVKPDNLSQY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
           ++ + ++N+GEDCPVF+ L+EFCQ+ AGG++  A +LN +  +IA+NWAGGLHHAKK EA
Sbjct: 61  QRYMQQFNVGEDCPVFDGLYEFCQLSAGGSVAGAIKLNKRQTEIAVNWAGGLHHAKKAEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCYIND+VL ILELLKYH RVLY+DIDVHHGDGVEE F+ TDRV+TVS+HK+G+ +FP
Sbjct: 121 SGFCYINDIVLAILELLKYHQRVLYVDIDVHHGDGVEEXFFTTDRVLTVSYHKYGE-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTGD+ +IG  +GK YA+N PL+DGIDD S+  +F  +++KV+E Y PGA+VLQCGADSL
Sbjct: 180 GTGDLNDIGAGKGKHYAVNFPLRDGIDDASYEEIFAPVMTKVMEYYDPGAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            GDRLGCFNL++ GHA+CV F++KFN PLL+ GGGGYT +NVAR
Sbjct: 240 TGDRLGCFNLTVKGHAKCVEFMRKFNKPLLLLGGGGYTIKNVAR 283


>gi|393216231|gb|EJD01722.1| hypothetical protein FOMMEDRAFT_126875 [Fomitiporia mediterranea
           MF3/22]
          Length = 558

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/347 (54%), Positives = 252/347 (72%), Gaps = 3/347 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++SY+YD DVG   +G  HPMKPHR+ MTH LV +Y +  KM+I RP +A P  +  
Sbjct: 2   SKRRVSYYYDNDVGLFSYGLGHPMKPHRIRMTHDLVSAYGMLDKMDILRPRRASPTNMTA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL R+TP+T        T++ +GED P FE +FEFC I AGG+IDAA+R+  
Sbjct: 62  FHTDEYIHFLGRVTPETAEELTYHGTRFLVGEDNPAFEGVFEFCTISAGGSIDAAKRIAA 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+   RVLYIDID HHGDGVEEA
Sbjct: 122 GATDIAINWAGGLHHAKKREASGFCYVNDIVLGILELLRTFPRVLYIDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRV+T SFHKFG+ +FPGTG V + G  +G  YA+NVPL+DG+ D +F  +F+ +I
Sbjct: 182 FYTTDRVLTCSFHKFGE-YFPGTGHVDDHGRDKGLGYAVNVPLRDGLTDEAFKGVFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +++E Y P A+VLQCGADSL+GD+LGCFNL+++GHA  V++++K  LPL++ GGGGYT 
Sbjct: 241 QRILEWYQPSAVVLQCGADSLSGDKLGCFNLTMEGHASSVQYLRKSGLPLILLGGGGYTI 300

Query: 303 ENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSLRIPNGHI 347
           +NV+R W  ET   L+ E  +   +P N Y ++F P   L +   ++
Sbjct: 301 KNVSRAWAYETACALNIEDTIDRNLPWNAYFEWFGPRYRLEVAENNM 347


>gi|268529728|ref|XP_002629990.1| C. briggsae CBR-HDA-2 protein [Caenorhabditis briggsae]
          Length = 503

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/335 (54%), Positives = 243/335 (72%), Gaps = 3/335 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  ++Y+Y  DVG  ++G  HPMKP RL + + LV SY++ + M + +  K    ++A F
Sbjct: 26  KRNVAYYYHPDVGHFHYGQLHPMKPQRLVVCNDLVASYEMPRYMTVVQSPKLEASDIAAF 85

Query: 64  HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           HS DYV FL  +TP      + + L K+N+GEDCP+F  L+++C +Y+GG+++ ARRLN+
Sbjct: 86  HSQDYVNFLQTVTPKLATTMQDDVLRKFNIGEDCPLFAGLWDYCTLYSGGSVEGARRLNH 145

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           ++ DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 146 KMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 205

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           F  +DRVMTVSFH+FG  +FPG+G + + G   GK++AIN+PL   I D  + +LF+++I
Sbjct: 206 FNNSDRVMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFAINLPLMAAIRDEPYVKLFESVI 264

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V E + P AIVLQCG+DSL  DRLG F LS + HA  V++VK    PL+V GGGGYT 
Sbjct: 265 SSVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLGGGGYTL 324

Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAP 336
            NVARCW +ETG++L   + +EIPE+  Y  YF+P
Sbjct: 325 RNVARCWALETGVILGLRMKDEIPESSLYSHYFSP 359


>gi|336374067|gb|EGO02405.1| hypothetical protein SERLA73DRAFT_178334 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336386985|gb|EGO28131.1| hypothetical protein SERLADRAFT_462682 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 538

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/346 (54%), Positives = 250/346 (72%), Gaps = 6/346 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +++Y+YDGDVGS  +G  H MKPHR+ + H L+ +Y +  KM + RP +A    +  
Sbjct: 2   SKRRVAYYYDGDVGSFTYGLGHLMKPHRMRVAHDLITAYGMLDKMHVLRPKRASAKTMTS 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +YV FL R+TP+T        T++ +G+D P FE +F+FC I AGG+I AA R+ +
Sbjct: 62  FHTDEYVHFLSRVTPETAEELTYHGTRFLMGDDNPPFEGVFDFCSISAGGSICAAERIAS 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EA+GFCYIND+VLGILELL+   RVLY+DID HHGDGVEEA
Sbjct: 122 GSADIAINWAGGLHHAKKREAAGFCYINDIVLGILELLRTFPRVLYVDIDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT SFHKFG+ +FPGTG   + G+ +GK YA+NVP KDG+ D +F  +F+ ++
Sbjct: 182 FYTTDRVMTCSFHKFGE-YFPGTGTQDDKGKGKGKGYAVNVPFKDGLTDEAFKSVFEPVV 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           ++ +E + P  +VLQCG DS+AGD+LGCFN+++ GHA CV+F++K N+PL++ GGGGYT 
Sbjct: 241 ARCLEVFRPSVVVLQCGGDSIAGDKLGCFNITMHGHAHCVQFIRKKNIPLILLGGGGYTV 300

Query: 303 ENVARCWTVETGILL---DTELPNEIPENEYIKYFAPECSLRI-PN 344
           +NVAR W  ET   L   DT  PN +P NEY ++F P   L + PN
Sbjct: 301 KNVARAWAYETACALGIEDTIDPN-LPWNEYFEWFGPRYRLEVLPN 345


>gi|238484831|ref|XP_002373654.1| histone deacetylase HosA [Aspergillus flavus NRRL3357]
 gi|317140827|ref|XP_003189302.1| histone deacetylase HOS2 [Aspergillus oryzae RIB40]
 gi|220701704|gb|EED58042.1| histone deacetylase HosA [Aspergillus flavus NRRL3357]
          Length = 486

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/348 (53%), Positives = 243/348 (69%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FH 
Sbjct: 41  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARSATYEEMAEFHK 100

Query: 66  ADYVEFLHRITPDTQHLFRQ--ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P       Q   + ++N G+DCP+F+ L+ +C +YAGG+IDAAR+L N 
Sbjct: 101 TDYLDFLRQVMPGDMENPEQGENIARFNFGDDCPIFDGLYNYCSLYAGGSIDAARKLCNN 160

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCY+ND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF
Sbjct: 161 QSEIAINWSGGLHHAKKAEASGFCYVNDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAF 220

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +A+NVPL DGIDD S+ RLF
Sbjct: 221 WSTDRVLTVSFHKYDKDNFFPGTGALDSTGPTHPLNPGAHHAVNVPLHDGIDDESYIRLF 280

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + +I   + TY PGAIVLQCGADSL  DRLGCFNL++  H  CV +VK F LPLLV GGG
Sbjct: 281 REVIGSCISTYQPGAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYVKTFGLPLLVVGGG 340

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL+D +  +   IPE   +  +F P+ SL  P
Sbjct: 341 GYTPRNVSRAWAHETSILIDAQDTIDPNIPETVAFRNHFGPDYSLFPP 388


>gi|9858062|gb|AAG00980.1| histone deacetylase I [Tetrahymena thermophila]
          Length = 429

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/346 (51%), Positives = 247/346 (71%), Gaps = 12/346 (3%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIY-RPHKAYPVE----- 59
           +I+Y++D  +GS  +   HPMKPHR+ MT  LV SY++ KKM  + R +    +      
Sbjct: 18  RIAYYFDETIGSYNYANPHPMKPHRVAMTDTLVRSYEIDKKMNHFDRDYVNTYIRAVNEK 77

Query: 60  -LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAAR 118
            L  FHS +Y+E + ++ P+ +H +  +L ++N GEDCPV + L+++C  YA G++  A 
Sbjct: 78  ILTNFHSDEYIELIQKVHPNNKHFYEDQLYRFNFGEDCPVLDRLYDYCLTYAAGSVAGAN 137

Query: 119 RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGD 177
            L NQ  DIA+NW+GGLHHAK+ EASGFCYIND VL ILELLK +  RVLYIDID+HHGD
Sbjct: 138 LLANQKVDIALNWSGGLHHAKQSEASGFCYINDCVLAILELLKPFIQRVLYIDIDIHHGD 197

Query: 178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
           GVEE  Y TDRVMT SFHK+    FPGTG + +IG ++GKF+A+N PL +G+DD S    
Sbjct: 198 GVEE--YLTDRVMTSSFHKYK--IFPGTGHLDDIGTQQGKFHAVNFPLNEGLDDQSICLY 253

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           +K ++ K+++T+ P A+VLQCGADSL+GDRLGCFNLSI GH EC  F+K F +P+++ GG
Sbjct: 254 YKPVLQKIMDTFRPEAVVLQCGADSLSGDRLGCFNLSIKGHGECATFMKSFGVPIILLGG 313

Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           GGYT  NV RCW  ET ++++ EL +++P+NE++ YF PE  L +P
Sbjct: 314 GGYTLRNVPRCWVYETSVVVNEELQDQMPQNEFLHYFGPEYKLHMP 359


>gi|115442648|ref|XP_001218131.1| histone deacetylase phd1 [Aspergillus terreus NIH2624]
 gi|114188000|gb|EAU29700.1| histone deacetylase phd1 [Aspergillus terreus NIH2624]
          Length = 484

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/348 (53%), Positives = 247/348 (70%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   ELA+FH 
Sbjct: 41  RVSWHANPAVELHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARAATYEELAEFHK 100

Query: 66  ADYVEFLHRITPDTQHLFRQE--LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P       Q   + ++N G+DCP+F+ L+++C +YAGGT+DAAR+L N 
Sbjct: 101 TDYLDFLRQVVPGDMEKAEQSENIARFNFGDDCPIFDGLYDYCALYAGGTVDAARKLCNN 160

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IA+NW+GGLHHAKK EASGFCY+ND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF
Sbjct: 161 QAEIAVNWSGGLHHAKKAEASGFCYVNDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAF 220

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +AINVPL DGIDD S+ +LF
Sbjct: 221 WSTDRVLTVSFHKYDKDNFFPGTGALDSTGPTHPLNPGAHHAINVPLHDGIDDHSYIQLF 280

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + ++   V+TY PGAIVLQCGADSL  DRLGCFNL++  H  CV FVK FNLPLLV GGG
Sbjct: 281 RDVVGACVDTYRPGAIVLQCGADSLGCDRLGCFNLNVAAHGACVAFVKTFNLPLLVVGGG 340

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPE-NEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL+D +  +   IP+  ++  +F P+ SL  P
Sbjct: 341 GYTPRNVSRAWAHETSILIDAQDVIDPVIPDVVKFRNHFGPDYSLFPP 388


>gi|119479971|ref|XP_001260014.1| histone deacetylase HosA [Neosartorya fischeri NRRL 181]
 gi|119408168|gb|EAW18117.1| histone deacetylase HosA [Neosartorya fischeri NRRL 181]
          Length = 487

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/348 (53%), Positives = 248/348 (71%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FH 
Sbjct: 42  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARAATYEEMAEFHQ 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D ++  + E + ++N G+DCP+F  L+ +C +YAGG+IDAAR+L N 
Sbjct: 102 TDYLDFLRQVMPGDMENPEQSENIARFNFGDDCPIFNGLYNYCSLYAGGSIDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IA+NW+GGLHHAKK EASGFCY+ND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAVNWSGGLHHAKKAEASGFCYVNDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +A+NVPL DGIDD S+ +LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHAVNVPLNDGIDDESYIQLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + I+   V+TY PGAIVLQCGADSL  DRLGCFNL++  H  CV FVK F LPLLV GGG
Sbjct: 282 RDIVGACVDTYRPGAIVLQCGADSLGCDRLGCFNLNVGAHGACVAFVKTFGLPLLVVGGG 341

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL+D +  +   IP+   +  +F P+ SL  P
Sbjct: 342 GYTPRNVSRAWAHETSILIDAQDLIDPNIPDTVAFRNHFGPDFSLFPP 389


>gi|389741223|gb|EIM82412.1| hypothetical protein STEHIDRAFT_102910 [Stereum hirsutum FP-91666
           SS1]
          Length = 594

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/360 (51%), Positives = 247/360 (68%), Gaps = 8/360 (2%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVELA 61
           S+  +SY++   VG  ++G  HPMKPHRL +T+ LV+ Y L K++  ++ P  A   EL 
Sbjct: 36  SRPIVSYYFPKGVGEHHYGERHPMKPHRLSLTNALVMGYGLDKQIHFMHDPRPATRTELE 95

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H  +Y++FL ++TP  Q   R  +  +N  EDCPVF +++EF ++YAGG++  AR+L 
Sbjct: 96  VYHDPEYLDFLAKVTPGNQDDMRHLIDTFNCVEDCPVFGDMYEFSKMYAGGSLAGARKLC 155

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIA+NW+GGLHHAK+ EASGFCY+ND VL ILE+LKYH RVLYIDID+HHGDGVE 
Sbjct: 156 AGTTDIAMNWSGGLHHAKRGEASGFCYVNDAVLAILEMLKYHPRVLYIDIDIHHGDGVEL 215

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY ++RVMTVSFHK+   FFPGTG + + G   GK + +NVPL+DGI D  +  +FKT+
Sbjct: 216 AFYHSNRVMTVSFHKYTGDFFPGTGKLDDNGAGLGKHFCLNVPLQDGITDEMYLSVFKTV 275

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I   V T+ P  I+LQCGADSL  DRLG FNLSI  H ECV FV+KFN+PLLV GGGGYT
Sbjct: 276 IGDTVTTFQPSCILLQCGADSLGLDRLGAFNLSIAAHGECVNFVRKFNVPLLVVGGGGYT 335

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFA-------PECSLRIPNGHIVCSFKEI 354
            +NV+RCWT ET +L+  EL +E+P   Y  +F        P  + ++ N +   S + I
Sbjct: 336 VKNVSRCWTYETAVLVGAELADEVPATVYDAFFQDSAWKLHPPLTGKVENQNSPASLQRI 395


>gi|70989327|ref|XP_749513.1| histone deacetylase HosA [Aspergillus fumigatus Af293]
 gi|66847144|gb|EAL87475.1| histone deacetylase HosA [Aspergillus fumigatus Af293]
 gi|159128924|gb|EDP54038.1| histone deacetylase HosA [Aspergillus fumigatus A1163]
          Length = 487

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/348 (53%), Positives = 248/348 (71%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FH 
Sbjct: 42  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARAATYEEMAEFHQ 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D ++  + E + ++N G+DCP+F  L+ +C +YAGG+IDAAR+L N 
Sbjct: 102 TDYLDFLRQVMPGDMENPEQSENIARFNFGDDCPIFNGLYNYCSLYAGGSIDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IA+NW+GGLHHAKK EASGFCY+ND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAVNWSGGLHHAKKAEASGFCYVNDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +A+NVPL DGIDD S+ +LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHAVNVPLNDGIDDESYIQLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + I+   V+TY PGAIVLQCGADSL  DRLGCFNL++  H  CV FVK F LPLLV GGG
Sbjct: 282 RDIVGACVDTYRPGAIVLQCGADSLGCDRLGCFNLNVGAHGACVAFVKTFGLPLLVVGGG 341

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL+D +  +   IP+   +  +F P+ SL  P
Sbjct: 342 GYTPRNVSRAWAHETSILIDAQDLIDPNIPDTVAFRNHFGPDYSLFPP 389


>gi|154279642|ref|XP_001540634.1| histone deacetylase phd1 [Ajellomyces capsulatus NAm1]
 gi|150412577|gb|EDN07964.1| histone deacetylase phd1 [Ajellomyces capsulatus NAm1]
          Length = 481

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 242/350 (69%), Gaps = 16/350 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + DV   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FHS 
Sbjct: 43  VSWHANPDVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHHAMDLYKTREATYEEMAEFHSP 102

Query: 67  DYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           +Y++FL  + P           +  +N G+DCPVF+ L+ +C  YAGGT+DAAR+L N  
Sbjct: 103 EYLDFLQTVIPSDMENTALNDRMAGFNFGDDCPVFDGLYNYCSHYAGGTLDAARKLCNNQ 162

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF+
Sbjct: 163 SEIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAFW 222

Query: 185 FTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRLFK 239
            TDRV+TVSFHK+  D FFPGTG + + G       G  +A+NVPL DGI+D  +  LFK
Sbjct: 223 STDRVLTVSFHKYDKDNFFPGTGGLDDTGPSNPFNPGAHHALNVPLHDGIEDAEYVSLFK 282

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           +II   + TY PGAI+LQCGADSL  DRLGCFNL+I  H  CV + K FNLP LV GGGG
Sbjct: 283 SIIGPCIRTYQPGAIILQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFNLPTLVVGGGG 342

Query: 300 YTKENVARCWTVETGILLD------TELPNEIPENEYIKYFAPECSLRIP 343
           YT  NV+R W  ET I +D       +LP+ +P   +  +F P+CSL  P
Sbjct: 343 YTPRNVSRLWAYETAICIDGATDINPQLPDSLP---FRSHFKPDCSLFPP 389


>gi|71004284|ref|XP_756808.1| hypothetical protein UM00661.1 [Ustilago maydis 521]
 gi|46095596|gb|EAK80829.1| hypothetical protein UM00661.1 [Ustilago maydis 521]
          Length = 381

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/330 (56%), Positives = 242/330 (73%), Gaps = 2/330 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  ++SY++   VG  ++G  HPMKP RL +T+ LVL+Y LHK M ++ P +A   EL  
Sbjct: 49  SNPRVSYYHPAGVGDFHYGERHPMKPARLTLTNRLVLAYGLHKHMSVFTPRQATKEELEM 108

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH +DYVEFL  +TP T        TK+N  +DCPVF+ +++FC+ Y+G ++  ARRL  
Sbjct: 109 FHDSDYVEFLANVTPSTPP--SAAFTKFNFADDCPVFDGMYDFCKSYSGASLAGARRLAA 166

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDID+HHGDGV+EA
Sbjct: 167 GETDIAINWSGGLHHAKKFEASGFCYVNDIVLGIMELLRYHPRVLYIDIDIHHGDGVQEA 226

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY ++RVMTVSFHK+G+ FFP TG++ EIG   GK + +NVPL+DGIDD+ +  LFK+++
Sbjct: 227 FYNSNRVMTVSFHKYGNDFFPCTGNIDEIGTGLGKHFCLNVPLQDGIDDSGYVALFKSVM 286

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              + T+ P +IVLQCGADSL  DRLGCFNLSI  H ECV+F+K F LPLLV GGGGYT 
Sbjct: 287 EPCITTFRPSSIVLQCGADSLGLDRLGCFNLSIAAHGECVQFIKSFGLPLLVLGGGGYTI 346

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIK 332
            NVARCW  ET +L    +P+ +P  +  K
Sbjct: 347 RNVARCWAYETSVLTGCSIPDTLPSWQSRK 376


>gi|328853223|gb|EGG02363.1| hypothetical protein MELLADRAFT_75492 [Melampsora larici-populina
           98AG31]
          Length = 382

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/368 (51%), Positives = 252/368 (68%), Gaps = 27/368 (7%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +++Y++D D+G+  F P+HPMKPHR+ M H LVL+  LH+KM++    +A   E+ +FH+
Sbjct: 3   RVAYYFDDDIGAYAFAPHHPMKPHRIKMAHSLVLNAGLHQKMDVLTAKRASKEEMTKFHT 62

Query: 66  ADYVEFLHRITPDTQHLF-----RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
            +Y+  +  +  D   +      +    ++  G+DCP FE LFEFC I AGG+I AA+R+
Sbjct: 63  DEYISHIASLNLDDPEMLASGRDKSGDNRFLAGDDCPGFEGLFEFCSISAGGSIAAAKRI 122

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
           N+   DIAINWAGGLHHAKK EASGFCY+ND+VL ILELL++H RVLYIDID+HHGDGVE
Sbjct: 123 NSGQADIAINWAGGLHHAKKREASGFCYVNDIVLSILELLRFHTRVLYIDIDIHHGDGVE 182

Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
           EAFY TDRV+T SFHKFGD FFPGTG V ++G  +G  YA+NVPLK GI+D ++  +F+ 
Sbjct: 183 EAFYTTDRVLTCSFHKFGD-FFPGTGHVGDLGIGKGNGYAVNVPLKTGINDETYRSIFQP 241

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLG---------CFNLSID---------GHAECV 282
           +I+ ++  Y PGA+VLQCGADSLA D+LG           N  ID         GHA+CV
Sbjct: 242 VINHIMAWYQPGAVVLQCGADSLAEDKLGISVRSCRLLLLNAEIDMIESPYTLTGHADCV 301

Query: 283 RFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL---DTELPNEIPENEYIKYFAPECS 339
           R VK F +PL++ GGGGYT  NVAR W  ET + L   +   P E+P NEY++YF P   
Sbjct: 302 RHVKSFGVPLILLGGGGYTIRNVARTWAYETSVCLGPSEEMNPAELPYNEYMEYFGPTFK 361

Query: 340 LRIPNGHI 347
           L +P+ ++
Sbjct: 362 LDVPSNNM 369


>gi|359067616|ref|XP_003586365.1| PREDICTED: histone deacetylase 3-like [Bos taurus]
 gi|296485251|tpg|DAA27366.1| TPA: histone deacetylase 3 [Bos taurus]
          Length = 277

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/273 (63%), Positives = 219/273 (80%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct: 5   VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
           DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct: 65  DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
           IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
           DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA 279
           + Y P  IVLQCGADSL  DRLGCFNLSI GH 
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHG 277


>gi|262301873|gb|ACY43529.1| histone deacetylase [Hanseniella sp. 'Han2']
          Length = 277

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/278 (65%), Positives = 229/278 (82%), Gaps = 1/278 (0%)

Query: 30  RLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTK 89
           R+ MTH+L+L+Y L++KMEIYRPHKA   E+ +FHS DY+ FL  I PD    + +++ +
Sbjct: 1   RIRMTHNLLLNYGLYRKMEIYRPHKATQEEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQR 60

Query: 90  YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 149
           +N+GEDCPVF+ L+EFCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EASGFCY+
Sbjct: 61  FNVGEDCPVFDGLYEFCQLSTGGSVAGAVKLNKQAADIAINWAGGLHHAKKSEASGFCYV 120

Query: 150 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 209
           ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD++
Sbjct: 121 NDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLR 179

Query: 210 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 269
           +IG  +GK+YA+N PL+DGIDD S+  +F  I++KV+E Y P A+VLQCGADSL GDRLG
Sbjct: 180 DIGAGKGKYYAVNFPLRDGIDDDSYQSIFVPIVTKVMEMYQPSAVVLQCGADSLTGDRLG 239

Query: 270 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           CFNL++ GHA+C  FVK++NLPLL+ GGGGYT  NVAR
Sbjct: 240 CFNLTLKGHAKCAEFVKRYNLPLLMLGGGGYTIRNVAR 277


>gi|351700103|gb|EHB03022.1| Histone deacetylase 1 [Heterocephalus glaber]
          Length = 400

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 172/272 (63%), Positives = 219/272 (80%), Gaps = 1/272 (0%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFC 106
           MEIYRPHKA   E+ ++HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFC
Sbjct: 1   MEIYRPHKANAEEMTKYHSDDYIKFLCSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFC 60

Query: 107 QIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARV 166
           Q+  GG++ +A +LN Q  DIA+NWA GLHHAKK EASGFCY+ND+VL ILELLKYH R+
Sbjct: 61  QLSTGGSVASAVKLNKQQTDIAVNWARGLHHAKKSEASGFCYVNDIVLAILELLKYHQRM 120

Query: 167 LYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLK 226
           LYIDID+HHGDGVEEAFY TD VMTVSFHK+G+ +FPGTGD+ +IG  +GK+Y ++ PL+
Sbjct: 121 LYIDIDIHHGDGVEEAFYTTDWVMTVSFHKYGE-YFPGTGDLWDIGAGKGKYYPVDYPLR 179

Query: 227 DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVK 286
           DGIDD S   +FK ++SKV+E + P A+VLQCG+DS +GDRLGCFNL+I GHA+CV FVK
Sbjct: 180 DGIDDESHEAIFKPVMSKVMEMFQPSAVVLQCGSDSHSGDRLGCFNLTIRGHAKCVEFVK 239

Query: 287 KFNLPLLVTGGGGYTKENVARCWTVETGILLD 318
            FNLP+L+ GGGGY   NVARCWT +T + LD
Sbjct: 240 SFNLPMLMLGGGGYNIHNVARCWTYKTAVALD 271


>gi|341882716|gb|EGT38651.1| hypothetical protein CAEBREN_31379 [Caenorhabditis brenneri]
          Length = 405

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 178/336 (52%), Positives = 243/336 (72%), Gaps = 3/336 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  ++Y++  DVG  ++G  HPMKP RL + + LV+SY++ K M +    K    +++ F
Sbjct: 25  KRNVAYYFHKDVGHFHYGQLHPMKPQRLSVCNDLVVSYEMPKYMTVVESPKLNADDISVF 84

Query: 64  HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           HS DYV FL  +TP +      E   K+N+GEDCP+F  ++++C +YAGG+++ ARRLN+
Sbjct: 85  HSNDYVNFLKTVTPRSALTMTDEHFRKFNIGEDCPLFAGIWDYCTLYAGGSVEGARRLNH 144

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           ++ DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 145 KINDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 204

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           F  +DRVMTVSFH+FG+ +FPG+G + + G   G+++A+N+PL+ GI D  + +LF+++I
Sbjct: 205 FNNSDRVMTVSFHRFGN-YFPGSGSIMDKGTGPGRYFAVNLPLQSGIKDEPYLKLFESVI 263

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V E + P AIVLQCG+DSL  DRLG F+LS + HA  V++VK    PL+V GGGGYT 
Sbjct: 264 SSVEENFNPEAIVLQCGSDSLCEDRLGQFSLSFNAHARAVKYVKSLGKPLMVLGGGGYTL 323

Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAPE 337
            NVARCW +ETG++L   + +EIP    Y  YF P 
Sbjct: 324 RNVARCWALETGVILGLRMSDEIPGTSLYSHYFTPR 359


>gi|121710376|ref|XP_001272804.1| histone deacetylase HosA [Aspergillus clavatus NRRL 1]
 gi|119400954|gb|EAW11378.1| histone deacetylase HosA [Aspergillus clavatus NRRL 1]
          Length = 487

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/348 (53%), Positives = 247/348 (70%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   ELA FH+
Sbjct: 42  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARAATYEELADFHT 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D ++  + E + ++N G+DCP+F  L+ +C +YAGG+IDAAR+L N 
Sbjct: 102 TDYLDFLQQVMPGDMENPAQSENVARFNFGDDCPIFNGLYNYCSLYAGGSIDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IA+NW+GGLHHAKK EASGFCY+ND+VLG+L+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAVNWSGGLHHAKKAEASGFCYVNDIVLGVLQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +AINVPL DGIDD S+ +LF
Sbjct: 222 WSTDRVLTVSFHKYDRDNFFPGTGPLDSNGPTHPLNPGAHHAINVPLNDGIDDESYIQLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           + +I   + TY PGAIVLQCGADSL  DRLGCFNL++  H  CV FVK F LP+LV GGG
Sbjct: 282 RDVIGPCINTYHPGAIVLQCGADSLGCDRLGCFNLNVGAHGACVAFVKTFGLPMLVVGGG 341

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL+D +  +   IP+   +  +F P+ SL  P
Sbjct: 342 GYTPRNVSRAWAHETSILIDAQDLIDPNIPDTVAFRNHFGPDYSLFPP 389


>gi|325092600|gb|EGC45910.1| histone deacetylase HosA [Ajellomyces capsulatus H88]
          Length = 487

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 241/350 (68%), Gaps = 16/350 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + DV   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FHS 
Sbjct: 43  VSWHANPDVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHYAMDLYKTREATYEEMAEFHSP 102

Query: 67  DYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           +Y++FL  + P           +  +N G+DCPVF+ L+ +C  YAGGT+DAAR+L N  
Sbjct: 103 EYLDFLQTVIPSDMENTALNDRMAGFNFGDDCPVFDGLYNYCSHYAGGTLDAARKLCNNQ 162

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF+
Sbjct: 163 SEIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAFW 222

Query: 185 FTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRLFK 239
            TDRV+TVSFHK+  D FFPGTG + + G       G  +A+NVPL DGI+D  +  LFK
Sbjct: 223 STDRVLTVSFHKYDKDNFFPGTGGLDDTGPSNPFNPGAHHALNVPLHDGIEDAEYVSLFK 282

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           +II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GGGG
Sbjct: 283 SIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVVGGGG 342

Query: 300 YTKENVARCWTVETGILLD------TELPNEIPENEYIKYFAPECSLRIP 343
           YT  NV+R W  ET I +D       +LP+ +P   +  +F P+CSL  P
Sbjct: 343 YTPRNVSRLWAYETAICIDGATDINPQLPDSLP---FRSHFKPDCSLFPP 389


>gi|262301921|gb|ACY43553.1| histone deacetylase [Polyxenus fasciculatus]
          Length = 277

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 181/278 (65%), Positives = 227/278 (81%), Gaps = 1/278 (0%)

Query: 30  RLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTK 89
           R+ MTH+L+L+  L++KMEIYRPHKA   E+  FHS BY+ FL  I PD    + +++ +
Sbjct: 1   RIRMTHNLLLNSGLYRKMEIYRPHKATQEEMTXFHSDBYIRFLRSIRPDNMTEYNKQMQR 60

Query: 90  YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 149
           +N+GEDCPVF+ L+ FCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EASGFCY+
Sbjct: 61  FNVGEDCPVFDGLYXFCQLSTGGSVAGAVKLNKQAADIAINWAGGLHHAKKSEASGFCYV 120

Query: 150 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 209
           ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD++
Sbjct: 121 NDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLR 179

Query: 210 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 269
           +IG  +GK+YA N PL+DGIDD  + ++F  IISKV+E Y P AIVLQCGADSL+GDRLG
Sbjct: 180 DIGAGKGKYYATNFPLRDGIDDEMYEQIFVPIISKVMEMYQPSAIVLQCGADSLSGDRLG 239

Query: 270 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
           CFN+++ GHA+CV F+KK+NLPLL+ GGGGYT  NVAR
Sbjct: 240 CFNVTLKGHAKCVEFIKKYNLPLLLLGGGGYTIRNVAR 277


>gi|240279470|gb|EER42975.1| histone deacetylase HosA [Ajellomyces capsulatus H143]
          Length = 487

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 241/350 (68%), Gaps = 16/350 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + DV   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FHS 
Sbjct: 43  VSWHANPDVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHYAMDLYKTREATYEEMAEFHSP 102

Query: 67  DYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           +Y++FL  + P           +  +N G+DCPVF+ L+ +C  YAGGT+DAAR+L N  
Sbjct: 103 EYLDFLQTVIPSDMENTALNDRMAGFNFGDDCPVFDGLYNYCSHYAGGTLDAARKLCNNQ 162

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF+
Sbjct: 163 SEIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAFW 222

Query: 185 FTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRLFK 239
            TDRV+TVSFHK+  D FFPGTG + + G       G  +A+NVPL DGI+D  +  LFK
Sbjct: 223 STDRVLTVSFHKYDKDNFFPGTGGLDDTGPSNPFNPGAHHALNVPLHDGIEDAEYVSLFK 282

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           +II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GGGG
Sbjct: 283 SIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVVGGGG 342

Query: 300 YTKENVARCWTVETGILLD------TELPNEIPENEYIKYFAPECSLRIP 343
           YT  NV+R W  ET I +D       +LP+ +P   +  +F P+CSL  P
Sbjct: 343 YTPRNVSRLWAYETAICIDGATDINPQLPDSLP---FRSHFKPDCSLFPP 389


>gi|339251472|ref|XP_003372758.1| histone deacetylase 1 [Trichinella spiralis]
 gi|316968900|gb|EFV53101.1| histone deacetylase 1 [Trichinella spiralis]
          Length = 363

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/341 (55%), Positives = 245/341 (71%), Gaps = 1/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ YFYD D+G+  F PNH MKP R+ M H LV  Y L++ + I  PH+A P E+  
Sbjct: 7   SKKRVCYFYDPDIGNYMFSPNHDMKPIRVRMVHCLVYEYQLYRHVTIMEPHRATPDEMKI 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH  DY++ L R  P+  +     L+ YN+G+DCP+F+ +FE+CQI  GG+I  A+ LN+
Sbjct: 67  FHDEDYIDMLRRAKPEHMNCNLDALSYYNIGDDCPLFDGIFEYCQITTGGSIAGAQSLNS 126

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGG+HHAK  +ASGFC++ND+VL IL+LLK H RVLY+DID HHGDGVEEA
Sbjct: 127 GEYDIAINWAGGMHHAKWYKASGFCFVNDIVLAILQLLKKHQRVLYVDIDCHHGDGVEEA 186

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT+SFHKFG+ FFPGTG+   IG  +G  YA+N PL +GI D S+  +F+ +I
Sbjct: 187 FYTTDRVMTISFHKFGN-FFPGTGNYDSIGYGKGLHYAVNFPLHEGITDLSYMIVFRGVI 245

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           SK VE + P AIV+QCGADSLA DRLGCFNL++ GH E V++++ FNLPLL+ GGGGYT 
Sbjct: 246 SKAVERFRPNAIVMQCGADSLAMDRLGCFNLTVAGHGELVKYIRSFNLPLLLVGGGGYTL 305

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
            NV RCWT ET +    E+ NE+P  E+   +AP  +L  P
Sbjct: 306 SNVGRCWTYETAVAAGVEISNELPICEHYSLYAPTYTLHAP 346


>gi|255943141|ref|XP_002562339.1| Pc18g05110 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587072|emb|CAP94735.1| Pc18g05110 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 505

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/345 (54%), Positives = 240/345 (69%), Gaps = 10/345 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A FH 
Sbjct: 40  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLARAATYEEMADFHD 99

Query: 66  ADYVEFLHRITPDTQHLFRQ--ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL +I P       Q   + ++N G+DCP+F+ L+ +C +YAGGT+DAAR+L N 
Sbjct: 100 TDYLDFLQQIMPGDIDRPEQADNVVRFNFGDDCPIFDGLYSYCSLYAGGTVDAARKLCND 159

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCY+ND+VLG L+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 160 QSDIAINWSGGLHHAKKAEASGFCYVNDIVLGTLQLLRHHPRVMYIDIDVHHGDGVEQAF 219

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG  ++ G       G  +AINVPL DGIDD S+  LF
Sbjct: 220 WSTDRVLTVSFHKYDKDNFFPGTGAREDTGPAHPLNPGAHHAINVPLNDGIDDESYIALF 279

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I     TY PGAIVLQCGADSL  DRLGCFNL++  H  CV + K F LPLLV GGG
Sbjct: 280 KEVIGACTRTYQPGAIVLQCGADSLGCDRLGCFNLNVRAHGACVAYTKTFGLPLLVVGGG 339

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSL 340
           GYT  NV+R W  ET ILLD E  +   IP++  +  +F P+ SL
Sbjct: 340 GYTPRNVSRAWAHETSILLDAENVINPTIPDSVAFRNHFGPDFSL 384


>gi|225562664|gb|EEH10943.1| histone deacetylase HosA [Ajellomyces capsulatus G186AR]
          Length = 487

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 241/350 (68%), Gaps = 16/350 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + DV   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FHS 
Sbjct: 43  VSWHANPDVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHYAMDLYKTREATYEEMAEFHSP 102

Query: 67  DYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           +Y++FL  + P           +  +N G+DCPVF+ L+ +C  YAGGT+DAAR+L N  
Sbjct: 103 EYLDFLQTVIPSDMENTALNDRMAGFNFGDDCPVFDGLYNYCSHYAGGTLDAARKLCNNQ 162

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF+
Sbjct: 163 SEIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRLHPRVMYIDIDVHHGDGVEQAFW 222

Query: 185 FTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRLFK 239
            TDRV+TVSFHK+  D FFPGTG + + G       G  +A+NVPL DGI+D  +  LFK
Sbjct: 223 STDRVLTVSFHKYDKDNFFPGTGGLDDTGPSNPFNPGAHHALNVPLHDGIEDAEYVSLFK 282

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           +II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GGGG
Sbjct: 283 SIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVVGGGG 342

Query: 300 YTKENVARCWTVETGILLD------TELPNEIPENEYIKYFAPECSLRIP 343
           YT  NV+R W  ET I +D       +LP+ +P   +  +F P+CSL  P
Sbjct: 343 YTPRNVSRLWAYETAICIDGATDINPQLPDSLP---FRSHFKPDCSLFPP 389


>gi|261196940|ref|XP_002624873.1| histone deacetylase phd1 [Ajellomyces dermatitidis SLH14081]
 gi|239596118|gb|EEQ78699.1| histone deacetylase phd1 [Ajellomyces dermatitidis SLH14081]
 gi|239609705|gb|EEQ86692.1| histone deacetylase phd1 [Ajellomyces dermatitidis ER-3]
 gi|327355364|gb|EGE84221.1| histone deacetylase HosA [Ajellomyces dermatitidis ATCC 18188]
          Length = 487

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 241/350 (68%), Gaps = 16/350 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + DV   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FH+ 
Sbjct: 43  VSWHANPDVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHHAMDLYKTREATYEEMAEFHTR 102

Query: 67  DYVEFLHRITPD--TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
           +Y++FL  + P    +      +  +N G+DCPVF+ LF +C  YAGGT+DAAR+L N  
Sbjct: 103 EYLDFLQSVIPSDMEESSLLDRMAGFNFGDDCPVFDGLFNYCSHYAGGTLDAARKLCNNQ 162

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
            +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF+
Sbjct: 163 SEIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRVHPRVMYIDIDVHHGDGVEQAFW 222

Query: 185 FTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRLFK 239
            TDRV+TVSFHK+  D FFPGTG + + G       G  +A+NVPL DGI+D  +  LFK
Sbjct: 223 STDRVLTVSFHKYDKDNFFPGTGGLDDTGPSNPLNPGAHHALNVPLHDGIEDGEYVSLFK 282

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
           TI+   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GGGG
Sbjct: 283 TIVGPAIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKSFGLPTLVVGGGG 342

Query: 300 YTKENVARCWTVETGILLD------TELPNEIPENEYIKYFAPECSLRIP 343
           YT  NV+R W  ET I +D        LP+ +P   +  +F P+CSL  P
Sbjct: 343 YTPRNVSRLWAYETAICIDGAQDINPRLPDSLP---FRTHFKPDCSLFPP 389


>gi|296419414|ref|XP_002839303.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635431|emb|CAZ83494.1| unnamed protein product [Tuber melanosporum]
          Length = 378

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/320 (59%), Positives = 237/320 (74%), Gaps = 2/320 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKP RL +T+ LVL Y LHK M+ Y    A   EL  FH  DY+EFL R+TP     F  
Sbjct: 1   MKPWRLTLTNQLVLGYGLHKHMDTYATRPANEDELKDFHGDDYLEFLKRVTPHNTQEFAN 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           +L+K+N+G+DCP+F+ ++++C +YAG ++DAA++L N   DIAINW+GGLHHAKK EASG
Sbjct: 61  DLSKFNIGDDCPIFDGIWDYCSLYAGASLDAAKKLINHQSDIAINWSGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG-DLFFPG 204
           FCYIND+VL IL+LL+YH RVLYIDIDVHHGDGVE+AF+ TDRVMT+S HK+  D FFPG
Sbjct: 121 FCYINDIVLAILQLLRYHPRVLYIDIDVHHGDGVEQAFFSTDRVMTLSLHKYDKDNFFPG 180

Query: 205 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 264
           TG+  +IG   GK YA+NVPLKDGIDD S+ RLFK I+  V+E Y P A+VLQCGADSL 
Sbjct: 181 TGNWDDIGGGAGKHYALNVPLKDGIDDESYVRLFKQIVEPVIEKYCPTAVVLQCGADSLG 240

Query: 265 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 324
            D+LGCFNL+I  H ECV FVK F LPLLV GGGGYT  NV+R WT ET I +  E+ ++
Sbjct: 241 SDKLGCFNLNIKAHGECVEFVKAFGLPLLVLGGGGYTPRNVSRLWTYETAICVGAEIEDD 300

Query: 325 IP-ENEYIKYFAPECSLRIP 343
           +P    Y +YF P+  L  P
Sbjct: 301 LPARTPYREYFGPDYKLHPP 320


>gi|296810954|ref|XP_002845815.1| histone deacetylase phd1 [Arthroderma otae CBS 113480]
 gi|238843203|gb|EEQ32865.1| histone deacetylase phd1 [Arthroderma otae CBS 113480]
          Length = 483

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/351 (53%), Positives = 243/351 (69%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHANATVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYVARAATYDEMAEFHS 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D     +Q+ L  +N G+DCP+F+ L+++C +Y+GGT+DAAR+L N 
Sbjct: 102 TDYLDFLSQVIPADMDSAAQQDRLAGFNFGDDCPIFDGLYDYCALYSGGTVDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKTEASGFCYINDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHSLNVPLNDGIEDNDYVNLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY P AIVLQCGADSL  DRLGCFNL+I  H  CV F K F LP LV GGG
Sbjct: 282 KAIIGPCINTYQPSAIVLQCGADSLGCDRLGCFNLNIRAHGACVAFTKSFGLPTLVLGGG 341

Query: 299 GYTKENVARCWTVETGIL------LDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I       LD +LP  +P   +  +F P+CSL  P
Sbjct: 342 GYTPRNVSRLWAYETAICIGAENQLDPKLPETLP---FRSHFQPDCSLFPP 389


>gi|406605314|emb|CCH43270.1| Histone deacetylase 1 [Wickerhamomyces ciferrii]
          Length = 360

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/301 (58%), Positives = 234/301 (77%), Gaps = 3/301 (0%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + QFH+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A R
Sbjct: 1   MCQFHTDEYIDFLSRVTPDNLDMFQKESVKFNVGDDCPVFDGLYEYCGISGGGSMEGAAR 60

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN   CDIA+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGV
Sbjct: 61  LNRGKCDIAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGV 120

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMT SFHK+G+ FFPGTG++++IG  +GK YA+NVPL+DGIDD ++  +F+
Sbjct: 121 EEAFYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKNYAVNVPLRDGIDDGTYKSVFE 179

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            +ISK++E Y P AIVLQCG DSL+GDRLGCFNLS+ GHA CV F K   +PL++ GGGG
Sbjct: 180 PVISKIMEWYQPSAIVLQCGGDSLSGDRLGCFNLSMKGHANCVNFCKSLGVPLMILGGGG 239

Query: 300 YTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL--RIPNGHIVCSFKEIDKF 357
           YT  NVAR W  ETG+L +  L  ++P N+Y +Y+ P+  L  R  N +   S + +DK 
Sbjct: 240 YTMRNVARTWAFETGLLNNEILDLDLPYNDYYEYYGPDYKLDVRPSNMYNANSPEYLDKI 299

Query: 358 I 358
           +
Sbjct: 300 M 300


>gi|302502969|ref|XP_003013445.1| hypothetical protein ARB_00263 [Arthroderma benhamiae CBS 112371]
 gi|291177009|gb|EFE32805.1| hypothetical protein ARB_00263 [Arthroderma benhamiae CBS 112371]
          Length = 483

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/351 (53%), Positives = 243/351 (69%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHSNATVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYVARAATYDEMAEFHS 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D     +Q+ L  +N G+DCP+F+ L+++C +Y+GGT+DAAR+L N 
Sbjct: 102 TDYLDFLSQVIPADMDSAAQQDRLAGFNFGDDCPIFDGLYDYCALYSGGTVDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKTEASGFCYINDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHSLNVPLNDGIEDNDYVNLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY P AIVLQCGADSL  DRLGCFNL+I  H  CV F K F LP LV GGG
Sbjct: 282 KAIIGPCITTYQPTAIVLQCGADSLGCDRLGCFNLNIRAHGACVAFTKSFGLPTLVLGGG 341

Query: 299 GYTKENVARCWTVETGIL------LDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I       LD +LP  +P   +  +F P+CSL  P
Sbjct: 342 GYTPRNVSRLWAYETAICVGAEDQLDPKLPETLP---FRSHFQPDCSLFPP 389


>gi|302652788|ref|XP_003018236.1| hypothetical protein TRV_07757 [Trichophyton verrucosum HKI 0517]
 gi|291181857|gb|EFE37591.1| hypothetical protein TRV_07757 [Trichophyton verrucosum HKI 0517]
          Length = 483

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/351 (53%), Positives = 243/351 (69%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHSNATVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYVARAATYDEMAEFHS 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D     +Q+ L  +N G+DCP+F+ L+++C +Y+GGT+DAAR+L N 
Sbjct: 102 TDYLDFLSQVIPADMDSAAQQDRLAGFNFGDDCPIFDGLYDYCALYSGGTVDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKTEASGFCYINDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHSLNVPLNDGIEDNDYVNLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY P AIVLQCGADSL  DRLGCFNL+I  H  CV F K F LP LV GGG
Sbjct: 282 KAIIGPCITTYQPTAIVLQCGADSLGCDRLGCFNLNIRAHGACVAFTKSFGLPTLVLGGG 341

Query: 299 GYTKENVARCWTVETGIL------LDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I       LD +LP  +P   +  +F P+CSL  P
Sbjct: 342 GYTPRNVSRLWAYETAICVGAEDQLDPKLPETLP---FRSHFQPDCSLFPP 389


>gi|393241119|gb|EJD48642.1| hypothetical protein AURDEDRAFT_162098 [Auricularia delicata
           TFB-10046 SS5]
          Length = 562

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/343 (54%), Positives = 248/343 (72%), Gaps = 2/343 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM-EIYRPHKAYPVELA 61
           S+  +SY+Y   VG  ++G  HPMKPHRL +T+ LVL Y L K++ + Y P  A   EL 
Sbjct: 33  SRPIVSYYYPKGVGEYHYGERHPMKPHRLSLTNALVLGYGLDKQIDQFYSPRPATRAELE 92

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
            +H +DY++FL R+TP+TQ+  +  + KYN  EDCPVF +++ FC+ YAG ++  AR+L 
Sbjct: 93  SYHDSDYIDFLARVTPETQNEMKAAIDKYNCVEDCPVFTDMYTFCRQYAGASLAGARKLT 152

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
               DIA+NW+GGLHHA++ EASGFCY+ND+V+ ILELL+YH RVLYIDID+HHGDGVE 
Sbjct: 153 QGTTDIAVNWSGGLHHARRGEASGFCYVNDIVMAILELLRYHPRVLYIDIDIHHGDGVEL 212

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGER-EGKFYAINVPLKDGIDDTSFTRLFKT 240
           AF+ ++RVMTVSFHK+   FFPGTG + + G    GK +A+NVPL+DGIDD S+ ++F +
Sbjct: 213 AFWHSNRVMTVSFHKYTGDFFPGTGRLDDNGGGLLGKHFALNVPLQDGIDDESYLKIFHS 272

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I   V  + P +IVLQCGADSL  DRLG FNLSI  H  CV FV+++NLPLLV GGGGY
Sbjct: 273 VIDDTVTAFRPSSIVLQCGADSLGCDRLGAFNLSIAAHGSCVDFVRRYNLPLLVLGGGGY 332

Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           T  NV+RCWT ET +L+   LP  +P   Y +YFAP+ +L  P
Sbjct: 333 TIHNVSRCWTHETAVLVGRTLPASLPRTAYYEYFAPDHALHPP 375


>gi|326473188|gb|EGD97197.1| histone deacetylase phd1 [Trichophyton tonsurans CBS 112818]
 gi|326477653|gb|EGE01663.1| histone deacetylase phd1 [Trichophyton equinum CBS 127.97]
          Length = 483

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/351 (53%), Positives = 243/351 (69%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHSNATVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYVARAATYDEMAEFHS 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D     +Q+ L  +N G+DCP+F+ L+++C +Y+GGT+DAAR+L N 
Sbjct: 102 TDYLDFLSQVIPADMDSAAQQDRLAGFNFGDDCPIFDGLYDYCALYSGGTVDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKTEASGFCYINDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHSLNVPLNDGIEDNDYVNLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY P AIVLQCGADSL  DRLGCFNL+I  H  CV F K F LP LV GGG
Sbjct: 282 KAIIGPCITTYQPTAIVLQCGADSLGCDRLGCFNLNIRAHGACVAFTKSFGLPTLVLGGG 341

Query: 299 GYTKENVARCWTVETGIL------LDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I       LD +LP  +P   +  +F P+CSL  P
Sbjct: 342 GYTPRNVSRLWAYETAICVGAEDQLDPKLPETLP---FRSHFQPDCSLFPP 389


>gi|327296365|ref|XP_003232877.1| histone deacetylase phd1 [Trichophyton rubrum CBS 118892]
 gi|326465188|gb|EGD90641.1| histone deacetylase phd1 [Trichophyton rubrum CBS 118892]
          Length = 483

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/351 (53%), Positives = 243/351 (69%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHSNATVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYVARAATYDEMAEFHS 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P D     +Q+ L  +N G+DCP+F+ L+++C +Y+GGT+DAAR+L N 
Sbjct: 102 TDYLDFLSQVIPADMDSAAQQDRLAGFNFGDDCPIFDGLYDYCALYSGGTVDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKTEASGFCYINDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHSLNVPLNDGIEDNDYVNLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY P AIVLQCGADSL  DRLGCFNL+I  H  CV F K F LP LV GGG
Sbjct: 282 KAIIGPCITTYQPTAIVLQCGADSLGCDRLGCFNLNIRAHGACVAFTKSFGLPTLVLGGG 341

Query: 299 GYTKENVARCWTVETGIL------LDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I       LD +LP  +P   +  +F P+CSL  P
Sbjct: 342 GYTPRNVSRLWAYETAICVGAEDQLDPKLPETLP---FRSHFQPDCSLFPP 389


>gi|308509866|ref|XP_003117116.1| CRE-HDA-2 protein [Caenorhabditis remanei]
 gi|308242030|gb|EFO85982.1| CRE-HDA-2 protein [Caenorhabditis remanei]
          Length = 504

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/335 (54%), Positives = 239/335 (71%), Gaps = 3/335 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  ++Y++  DVG  ++G  HPMKP RL + + LV+SY++ K M I    K    ++A F
Sbjct: 26  KRNVAYYFHPDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMAKYMTIVESPKLEAEDIAVF 85

Query: 64  HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           HS DYV FL  +TP        E L K+N+GEDCP+F  ++++C +Y+GG+++ ARRLN+
Sbjct: 86  HSQDYVNFLQTVTPKLALTMPDEVLRKFNIGEDCPLFAGIWDYCTLYSGGSVEGARRLNH 145

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            + D  INW GGLHHAK+ EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 146 GMNDTVINWPGGLHHAKRSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 205

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           F  +DRVMTVSFH+FG+ +FPG+G + + G   GK++AINVPL   I D  + +LF++II
Sbjct: 206 FNNSDRVMTVSFHRFGN-YFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYVKLFESII 264

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V E + P AIVLQCG+DSL  DRLG F LS +GHA  V++VK    PL+V GGGGYT 
Sbjct: 265 SSVDENFNPEAIVLQCGSDSLCEDRLGQFALSFNGHARAVKYVKSLGKPLMVLGGGGYTL 324

Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAP 336
            NVARCW +ETG++L   + +EIP    Y  YF P
Sbjct: 325 RNVARCWALETGVILGLRMGDEIPGTSLYSHYFTP 359


>gi|253747892|gb|EET02366.1| Histone deacetylase [Giardia intestinalis ATCC 50581]
          Length = 467

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/345 (50%), Positives = 244/345 (70%), Gaps = 4/345 (1%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  K S+FY+    + YFG +HPMKP R+ + + L+L+Y L + +  Y P  A   +++ 
Sbjct: 2   SSSKPSFFYNPLFPTFYFGLHHPMKPFRIALVNELILAYGLDEHLNYYTPRDATFQDMSL 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +H+ DYV FL  ITP+T   F+    +YN+ EDCPVF  L+++C +  G ++ A   LN+
Sbjct: 62  YHTPDYVRFLKNITPETLSKFQDLAKRYNITEDCPVFSGLYDYCSMTVGASVSACAHLNH 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
            LC++A+NW GG HHAK  EASGFCY NDLVLGILELLK H RVLY+DID+H GDGVEEA
Sbjct: 122 GLCNVALNWMGGFHHAKASEASGFCYANDLVLGILELLKVHERVLYVDIDIHAGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY T+RV+T+SFHK+   FFPGTG++ + G  +GK YAIN PLKD IDD +F  +F +++
Sbjct: 182 FYTTNRVLTLSFHKYDTDFFPGTGNLFDNGADQGKGYAINFPLKDAIDDDTFIYIFGSVV 241

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFN----LPLLVTGGG 298
            +V+  Y P A+VLQCGADSLAGDRLG FN+++ GH ECV+ + ++     +PLL+TGGG
Sbjct: 242 KEVMCCYDPQAVVLQCGADSLAGDRLGVFNVTLKGHGECVKILSQYTQAKGIPLLLTGGG 301

Query: 299 GYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  + A+CWT ET ++ +  L  +IP N++ +Y+ P+ SL +P
Sbjct: 302 GYTARSAAKCWTYETSLVCNQVLSEQIPANQFYEYYGPDYSLLVP 346


>gi|425769350|gb|EKV07845.1| Histone deacetylase [Penicillium digitatum Pd1]
 gi|425771122|gb|EKV09576.1| Histone deacetylase [Penicillium digitatum PHI26]
          Length = 505

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/348 (53%), Positives = 243/348 (69%), Gaps = 10/348 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A FH 
Sbjct: 40  RVSWHANPAVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYLSRAATYEEMADFHE 99

Query: 66  ADYVEFLHRITPDTQHLFRQ--ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL +I P       Q   + ++N G+DCP+F+ L+ +C +YAGGT+DAAR+L N 
Sbjct: 100 TDYLDFLQQIMPGDIDRPEQADNVARFNFGDDCPIFDGLYSYCSLYAGGTVDAARKLCNN 159

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCY+ND+VLG L+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 160 QSDIAINWSGGLHHAKKAEASGFCYVNDIVLGTLQLLRHHPRVMYIDIDVHHGDGVEQAF 219

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG  ++ G       G  +AINVPL DGIDD S+  LF
Sbjct: 220 WSTDRVLTVSFHKYDKDNFFPGTGAREDTGPAHPLNPGAHHAINVPLNDGIDDESYIALF 279

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I   ++TY PGAIVLQCGADSL  DRLGCFNL++  H  CV + K F +PLLV GGG
Sbjct: 280 KEVIGACMKTYQPGAIVLQCGADSLGCDRLGCFNLNVQAHGACVAYTKTFKIPLLVVGGG 339

Query: 299 GYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GYT  NV+R W  ET IL++ E  +   IP++  +  +F P+ SL  P
Sbjct: 340 GYTPRNVSRAWAHETSILVEAENIINPTIPDSVTFRNHFGPDFSLFPP 387


>gi|119188857|ref|XP_001245035.1| hypothetical protein CIMG_04476 [Coccidioides immitis RS]
 gi|392867941|gb|EAS33661.2| histone deacetylase phd1 [Coccidioides immitis RS]
          Length = 492

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/351 (53%), Positives = 243/351 (69%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG NHPMKP RL +T  LVL+Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHANPAVEPHHFGSNHPMKPWRLTLTKQLVLAYGMHHAMDLYLSRSATYEEMAEFHS 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY+EFL ++ P D +   + E L ++N G+DCPVF+ L+ +C +YAG T+DAAR+L N 
Sbjct: 102 TDYLEFLTQVMPADMESTAQVETLARFNFGDDCPVFDGLYNYCSLYAGATLDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCY+ND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKSEASGFCYVNDIVLGILQLLRIHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  + FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKENFFPGTGPLDSTGPSHPLNPGAHHSLNVPLNDGIEDNDYIALF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GGG
Sbjct: 282 KAIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVVGGG 341

Query: 299 GYTKENVARCWTVETGILLDTE------LPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I L+ E      LP+ +   ++  +F P+C+L  P
Sbjct: 342 GYTPRNVSRLWAYETAICLEAESDLNPVLPDSL---KFRNHFRPDCTLFPP 389


>gi|361130541|gb|EHL02310.1| putative Histone deacetylase RPD3 [Glarea lozoyensis 74030]
          Length = 562

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/309 (56%), Positives = 232/309 (75%), Gaps = 11/309 (3%)

Query: 39  LSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPV 98
           ++Y +++KMEIYR   A   E+ QFH+ +Y++FL ++TPD    F +E  KYN+G+DCPV
Sbjct: 1   MNYGVYQKMEIYRAKPATRHEMTQFHTDEYIDFLQKVTPDNMDTFAKEQGKYNVGDDCPV 60

Query: 99  FENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILE 158
           F+ LFEFC I AGG+++ A RLN           GGLHHAKK EASGFCY+ND+VLGI+E
Sbjct: 61  FDGLFEFCGISAGGSMEGAARLNR----------GGLHHAKKSEASGFCYVNDIVLGIIE 110

Query: 159 LLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKF 218
           LL++  RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTG++++IG   GK 
Sbjct: 111 LLRFKKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGSGKN 169

Query: 219 YAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGH 278
           YA+N PL+DGI+D ++  +F+ +I  V++ Y P AIVLQCG DSL+GDRLGCFNLS+ GH
Sbjct: 170 YAVNFPLRDGINDETYKSIFEPVIQSVMDYYDPEAIVLQCGGDSLSGDRLGCFNLSMRGH 229

Query: 279 AECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPEC 338
           A CV+FVK FN P LV GGGGYT  NVAR W  ETG+L+  ++   +P NEY +Y+ P+ 
Sbjct: 230 ANCVQFVKSFNKPTLVLGGGGYTMRNVARTWAFETGVLVGQDMGPMLPFNEYYEYYGPDY 289

Query: 339 SLRIPNGHI 347
            L + + ++
Sbjct: 290 ELDVRSSNM 298


>gi|303323523|ref|XP_003071753.1| histone deacetylase HosA, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240111455|gb|EER29608.1| histone deacetylase HosA, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320035106|gb|EFW17048.1| histone deacetylase phd1 [Coccidioides posadasii str. Silveira]
          Length = 492

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/351 (53%), Positives = 243/351 (69%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG NHPMKP RL +T  LVL+Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHANPAVEPHHFGSNHPMKPWRLTLTKQLVLAYGMHHAMDLYLSRSATYEEMAEFHS 101

Query: 66  ADYVEFLHRITP-DTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY+EFL ++ P D +   + E L ++N G+DCPVF+ L+ +C +YAG T+DAAR+L N 
Sbjct: 102 TDYLEFLTQVMPADMESTAQVETLARFNFGDDCPVFDGLYNYCSLYAGATLDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +IAINW+GGLHHAKK EASGFCY+ND+VLGIL+LL+ H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSEIAINWSGGLHHAKKSEASGFCYVNDIVLGILQLLRIHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  + FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKENFFPGTGPLDSTGPSHPLNPGAHHSLNVPLNDGIEDNDYIALF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GGG
Sbjct: 282 KAIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVVGGG 341

Query: 299 GYTKENVARCWTVETGILLDTE------LPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I L+ E      LP+ +   ++  +F P+C+L  P
Sbjct: 342 GYTPRNVSRLWAYETAICLEAESDLNPVLPDSL---KFRNHFRPDCTLFPP 389


>gi|301088874|ref|XP_002894820.1| histone deacetylase, putative [Phytophthora infestans T30-4]
 gi|262107357|gb|EEY65409.1| histone deacetylase, putative [Phytophthora infestans T30-4]
          Length = 319

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/317 (57%), Positives = 226/317 (71%), Gaps = 22/317 (6%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ + HHLV++YDL+ KM+++ PH A   E+  FH+ DY+EFL  ++P  Q     
Sbjct: 1   MKPHRMKLAHHLVVNYDLYHKMDVFEPHWASADEMKVFHAPDYIEFLQHVSPANQRDPTI 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           +L K     DCPVF+ +F+FCQIY GGT+DA  RLN  LCDIAINW+GGLHHAKK     
Sbjct: 61  DLAKCT-DTDCPVFDGVFDFCQIYTGGTLDAVARLNFGLCDIAINWSGGLHHAKKA---- 115

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
                           YH RVLYIDID HHGDGVEEAFY TDRVMTVSFHK+GD FFPGT
Sbjct: 116 ----------------YHPRVLYIDIDAHHGDGVEEAFYVTDRVMTVSFHKYGD-FFPGT 158

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GDVK+IG + GK+YA+N PL  G+DD S+  +FK +I KV+ET+ P A+VLQCGADSL G
Sbjct: 159 GDVKDIGAKSGKYYAVNFPLHSGMDDDSYESIFKPVIDKVMETFCPSAVVLQCGADSLTG 218

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFN++  GH ECVRFVK F LP+LV GGGGY   NV+R W  ET IL++ E+ N I
Sbjct: 219 DRLGCFNVTTRGHGECVRFVKGFGLPMLVLGGGGYRIRNVSRAWAYETSILVNQEVSNNI 278

Query: 326 PENEYIKYFAPECSLRI 342
           P N+Y ++++PE  L +
Sbjct: 279 PYNDYFEFYSPEFKLHL 295


>gi|444707342|gb|ELW48624.1| Histone deacetylase 1 [Tupaia chinensis]
          Length = 509

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/380 (50%), Positives = 250/380 (65%), Gaps = 58/380 (15%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY++FL  I PD      +
Sbjct: 1   MKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEHSK 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
           ++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EASG
Sbjct: 61  QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct: 121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAP----GAIV------ 255
           GD+++IG  +GK+YA+N PL+DGIDD S+  +FK    +   + A     GA V      
Sbjct: 180 GDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPGCLRCGRSEAGPLGLGACVALRVCV 239

Query: 256 -LQCGADSLAGD-------RLG---------------------------CFNLSIDG--- 277
              CG  ++  D       R+G                           C + S+ G   
Sbjct: 240 GALCGYQAIRDDPHSAYPWRMGGPCLWRQLWEVTSKVMEMFQPSAVVLQCGSDSLSGDRL 299

Query: 278 ---------HAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 328
                    HA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+P N
Sbjct: 300 GCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYN 359

Query: 329 EYIKYFAPECSLRIPNGHIV 348
           +Y +YF P+  L I   ++ 
Sbjct: 360 DYFEYFGPDFKLHISPSNMT 379


>gi|17534739|ref|NP_495678.1| Protein HDA-2 [Caenorhabditis elegans]
 gi|1176665|sp|Q09440.1|HDA2_CAEEL RecName: Full=Putative histone deacetylase 2
 gi|3874170|emb|CAA86662.1| Protein HDA-2 [Caenorhabditis elegans]
          Length = 507

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/335 (53%), Positives = 239/335 (71%), Gaps = 3/335 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K  ++Y+Y  DVG  ++G  HPMKP RL + + LV+SY++ K M +    K    +++ F
Sbjct: 28  KRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVF 87

Query: 64  HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           H+ DYV FL  +TP        + L ++N+GEDCP+F  L+++C +YAGG+++ ARRLN+
Sbjct: 88  HTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNH 147

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           ++ DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 148 KMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 207

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           F  +DRVMTVSFH+FG  +FPG+G + + G   GK++AINVPL   I D  + +LF+++I
Sbjct: 208 FNNSDRVMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVI 266

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           S V E + P AIVLQCG+DSL  DRLG F LS + HA  V++VK    PL+V GGGGYT 
Sbjct: 267 SGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLGGGGYTL 326

Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAP 336
            NVARCW +ETG++L   + +EIP    Y  YF P
Sbjct: 327 RNVARCWALETGVILGLRMDDEIPGTSLYSHYFTP 361


>gi|159109241|ref|XP_001704886.1| Histone deacetylase [Giardia lamblia ATCC 50803]
 gi|52857648|gb|AAU89077.1| histone deacetylase HDAC [Giardia intestinalis]
 gi|157432961|gb|EDO77212.1| Histone deacetylase [Giardia lamblia ATCC 50803]
          Length = 467

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 243/342 (71%), Gaps = 4/342 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K S+FY+    + YFG +HPMKP R+ + + L+L+Y L + +  Y P  A   ++A +H+
Sbjct: 5   KPSFFYNPLFPTFYFGLHHPMKPFRIALVNELILAYGLDEHLNYYTPRDATFQDMALYHT 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ITP+T   F+    +YN+ EDCPVF  L+++C +  G +++A   LN+ +C
Sbjct: 65  PDYIRFLKNITPETLSKFQDLAKRYNITEDCPVFSGLYDYCSMTVGASVNACAHLNHGMC 124

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NW GG HHAK  EASGFCY NDLVLGILELLK H RVLY+DID+H GDGVEEAFY 
Sbjct: 125 DVALNWMGGFHHAKASEASGFCYANDLVLGILELLKVHERVLYVDIDIHAGDGVEEAFYT 184

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           T+RV+T+SFHK+   FFPGTG++ + G  +GK YAIN PLKD IDD +F  +F +++  V
Sbjct: 185 TNRVLTLSFHKYDTDFFPGTGNLFDNGADQGKGYAINFPLKDAIDDDTFIYIFGSVVKDV 244

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFN----LPLLVTGGGGYT 301
           +  Y P A+VLQCGADSLAGDRLG FN+++ GH ECV+ + ++     +PLL+TGGGGYT
Sbjct: 245 MCCYDPQAVVLQCGADSLAGDRLGVFNVTLKGHGECVKILYQYTQAKGIPLLLTGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
             + A+CWT ET ++ +  L  +IP N++ +Y+ P+ SL +P
Sbjct: 305 ARSAAKCWTYETSLVCNQVLSEQIPANQFYEYYGPDYSLLVP 346


>gi|308160291|gb|EFO62784.1| Histone deacetylase [Giardia lamblia P15]
          Length = 467

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 242/342 (70%), Gaps = 4/342 (1%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K S+FY+    + YFG +HPMKP R+ + + L+L+Y L + +  Y P  A   ++A +H+
Sbjct: 5   KPSFFYNPLFPTFYFGLHHPMKPFRIALVNELILAYGLDEHLNYYTPRDATFQDMALYHT 64

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            DY+ FL  ITP+T   F+    +YN+ EDCPVF  L+++C +  G ++ A   LN+ +C
Sbjct: 65  PDYIRFLKNITPETLSKFQDLAKRYNITEDCPVFSGLYDYCSMTVGASVSACAHLNHGMC 124

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           D+A+NW GG HHAK  EASGFCY NDLVLGILELLK H RVLY+DID+H GDGVEEAFY 
Sbjct: 125 DVALNWMGGFHHAKASEASGFCYANDLVLGILELLKVHERVLYVDIDIHAGDGVEEAFYT 184

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           T+RV+T+SFHK+   FFPGTG++ + G  +GK YAIN PLKD IDD +F  +F +++  V
Sbjct: 185 TNRVLTLSFHKYDTDFFPGTGNLFDNGADQGKGYAINFPLKDAIDDDTFIYIFGSVVKDV 244

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFN----LPLLVTGGGGYT 301
           +  Y P A+VLQCGADSLAGDRLG FN+++ GH ECV+ + ++     +PLL+TGGGGYT
Sbjct: 245 MCCYDPQAVVLQCGADSLAGDRLGVFNVTLKGHGECVKILYQYTQAKGIPLLLTGGGGYT 304

Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
             + A+CWT ET ++ +  L  +IP N++ +Y+ P+ SL +P
Sbjct: 305 ARSAAKCWTYETSLVCNQVLSEQIPANQFYEYYGPDYSLLVP 346


>gi|268580755|ref|XP_002645360.1| Hypothetical protein CBG15416 [Caenorhabditis briggsae]
          Length = 470

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/341 (53%), Positives = 242/341 (70%), Gaps = 2/341 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           S  KI+Y+YD ++G+ +FGP HPMKP+R+ + H LV +Y L++ M+I+RP  A   ++ +
Sbjct: 9   SSKKIAYYYDSNIGNFHFGPEHPMKPNRIRLAHQLVTAYGLYRHMDIFRPFPATRKDMQE 68

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH  DY  FL    P       +++ KYN+GEDCP+  +LF++ Q   GGT+ AA +LN 
Sbjct: 69  FHPEDYTYFLSVAEPQRVEWLAKDMKKYNIGEDCPIISDLFQYNQTTCGGTLAAATKLNK 128

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DI INW GG  HAK  EA+GFC+ ND+VLGIL+LL +H RVLY+DIDV HGDGVEEA
Sbjct: 129 QKADIVINWMGGSSHAKYAEANGFCFTNDVVLGILKLLDFHPRVLYVDIDVLHGDGVEEA 188

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFH++G   FPGTG+V+ IG  EG  Y++NVPLK+GI D  +  +FK II
Sbjct: 189 FYCTDRVMTVSFHQYGKGVFPGTGNVQSIGAEEGTGYSVNVPLKEGITDKVYQSIFKPII 248

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
           +KV++ + P  IVLQCG DSL+GD++G FNL++DGH ECV F++ FNLPL++ GGGG+  
Sbjct: 249 TKVMDRFDPSVIVLQCGPDSLSGDKIGRFNLTLDGHGECVSFLRSFNLPLMLLGGGGFNS 308

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
           +NVA+CW  ET I     LP   P N+Y KYF    S R+P
Sbjct: 309 DNVAKCWANETAIACGQNLPVRPPGNDYKKYF--RSSFRLP 347


>gi|15238556|ref|NP_198410.1| histone deacetylase7 [Arabidopsis thaliana]
 gi|75262461|sp|Q9FH09.1|HDA7_ARATH RecName: Full=Histone deacetylase 7
 gi|10176806|dbj|BAB09994.1| histone deacetylase [Arabidopsis thaliana]
 gi|21360986|gb|AAM49768.1| HDA7 [Arabidopsis thaliana]
 gi|91806930|gb|ABE66192.1| histone deacetylase [Arabidopsis thaliana]
 gi|332006602|gb|AED93985.1| histone deacetylase7 [Arabidopsis thaliana]
          Length = 409

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/345 (53%), Positives = 242/345 (70%), Gaps = 11/345 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFY+  +G  Y+G N P KP R+ +TH+L+LSY+LH+ MEI  P  A   +  +F
Sbjct: 9   KRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKF 68

Query: 64  HSADYVEFLHRITPDT----QHLFRQELTKYNLGEDC--PVFENLFEFCQIYAGGTIDAA 117
           HS +Y+ FL  +TP+T         + L ++N+  D   PVF NLF++C+ YAGG+I AA
Sbjct: 69  HSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAA 128

Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
            +LN Q  DIAINWAGG+HH KK +ASGF Y+ND+VL ILELLK   RVLYI+I   HGD
Sbjct: 129 AKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGD 188

Query: 178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
            VEEAF  TDRVMTVSFHK GD     TGD+ + GE +G++Y++N PLKDG+DD S   L
Sbjct: 189 EVEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGL 243

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F  +I + +E Y P  IVLQCGADSLAGD  G FNLSI GH +C+++V+ FN+PL++ GG
Sbjct: 244 FIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGG 303

Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           GGYT  NVARCW  ET I +  +L N++P N+Y+KYF P+  L I
Sbjct: 304 GGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHI 348


>gi|116831537|gb|ABK28721.1| unknown [Arabidopsis thaliana]
          Length = 410

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/345 (53%), Positives = 242/345 (70%), Gaps = 11/345 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K ++SYFY+  +G  Y+G N P KP R+ +TH+L+LSY+LH+ MEI  P  A   +  +F
Sbjct: 9   KRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKF 68

Query: 64  HSADYVEFLHRITPDT----QHLFRQELTKYNLGEDC--PVFENLFEFCQIYAGGTIDAA 117
           HS +Y+ FL  +TP+T         + L ++N+  D   PVF NLF++C+ YAGG+I AA
Sbjct: 69  HSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAA 128

Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
            +LN Q  DIAINWAGG+HH KK +ASGF Y+ND+VL ILELLK   RVLYI+I   HGD
Sbjct: 129 AKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGD 188

Query: 178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
            VEEAF  TDRVMTVSFHK GD     TGD+ + GE +G++Y++N PLKDG+DD S   L
Sbjct: 189 EVEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGL 243

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F  +I + +E Y P  IVLQCGADSLAGD  G FNLSI GH +C+++V+ FN+PL++ GG
Sbjct: 244 FIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGG 303

Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           GGYT  NVARCW  ET I +  +L N++P N+Y+KYF P+  L I
Sbjct: 304 GGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHI 348


>gi|315051748|ref|XP_003175248.1| histone deacetylase phd1 [Arthroderma gypseum CBS 118893]
 gi|311340563|gb|EFQ99765.1| histone deacetylase phd1 [Arthroderma gypseum CBS 118893]
          Length = 483

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 16/351 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LV++Y +H  M++Y    A   E+A+FHS
Sbjct: 42  RVSWHSNATVEPHHFGQSHPMKPWRLTLTKQLVMAYGMHHAMDLYVARAATYDEMAEFHS 101

Query: 66  ADYVEFLHRITPDTQHLFRQE--LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
            DY++FL ++ P       Q+  L  +N G+DCP+F+ L+++C +Y+GGT+DAAR+L N 
Sbjct: 102 TDYLDFLSQVIPSDMDSTAQQDRLAGFNFGDDCPIFDGLYDYCALYSGGTVDAARKLCNN 161

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCYIND+VLGIL+LL++H RV+YIDIDVHHGDGVE+AF
Sbjct: 162 QSDIAINWSGGLHHAKKTEASGFCYINDIVLGILQLLRHHPRVMYIDIDVHHGDGVEQAF 221

Query: 184 YFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRLF 238
           + TDRV+TVSFHK+  D FFPGTG +   G       G  +++NVPL DGI+D  +  LF
Sbjct: 222 WSTDRVLTVSFHKYDKDNFFPGTGPLDSTGPTHPLNPGAHHSLNVPLNDGIEDNDYVNLF 281

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K II   + TY P AIVLQCGADSL  DRLGCFNL+I  H  CV F K F LP LV GGG
Sbjct: 282 KAIIGPCITTYQPTAIVLQCGADSLGCDRLGCFNLNIRAHGACVAFTKSFGLPTLVLGGG 341

Query: 299 GYTKENVARCWTVETGIL------LDTELPNEIPENEYIKYFAPECSLRIP 343
           GYT  NV+R W  ET I       LD +LP  +P   +  +F P+ SL  P
Sbjct: 342 GYTPRNVSRLWAYETAICVGAEDHLDPKLPETLP---FRSHFQPDFSLFPP 389


>gi|351705261|gb|EHB08180.1| Histone deacetylase 2 [Heterocephalus glaber]
          Length = 357

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 166/273 (60%), Positives = 221/273 (80%), Gaps = 1/273 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 8   SKKKVCYYYDGDIGNYYYGQGHPMKPHRIPMTHNLLLNYGLYRKMEIYRPHKATAEEMTK 67

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +HS +Y++FL  I PD    + +++ ++N+GEDC VF+ LFEFCQ+  G ++  A +LN 
Sbjct: 68  YHSDEYIKFLRSIRPDNMSEYGKQMQRFNVGEDCSVFDALFEFCQLSTGSSVAGAVKLNR 127

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  D+A+NWAGGLHHAKK EASGFCY+ND+V  ILELL YH R+LYIDI +HHGDGVEEA
Sbjct: 128 QQTDMAVNWAGGLHHAKKSEASGFCYVNDIVFAILELLNYHQRILYIDIGIHHGDGVEEA 187

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           F  TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK II
Sbjct: 188 FCTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI 275
           SKV+E Y P  +VLQCGADSL+G+RL CFNL++
Sbjct: 247 SKVMELYQPSVVVLQCGADSLSGNRLDCFNLTV 279


>gi|384494644|gb|EIE85135.1| histone deacetylase RPD3 [Rhizopus delemar RA 99-880]
          Length = 502

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/252 (67%), Positives = 211/252 (83%), Gaps = 1/252 (0%)

Query: 91  NLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYIN 150
           N+G+D PVFE LFE+C + AGG+++ A RLN  LCDIAINWAGGLHHAKK EASGFCY+N
Sbjct: 8   NVGDDSPVFEGLFEYCGLSAGGSMEGAARLNRGLCDIAINWAGGLHHAKKSEASGFCYVN 67

Query: 151 DLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKE 210
           D+VLGILELL+Y+ARVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ FFPGTG++K+
Sbjct: 68  DIVLGILELLRYYARVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-FFPGTGELKD 126

Query: 211 IGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGC 270
           +G ++GK+Y++NVPL+DGIDD S+   F+ +I KV+E Y P A+VLQCG DSL+GD+LGC
Sbjct: 127 VGVQKGKYYSVNVPLRDGIDDESYRTTFEPVIEKVMEWYRPAAVVLQCGGDSLSGDKLGC 186

Query: 271 FNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEY 330
           FNLS+ GHA CVRFVKKFNLP LV GGGGYT  NVAR W  ETG+++  ++  E+P N+Y
Sbjct: 187 FNLSMKGHANCVRFVKKFNLPTLVLGGGGYTMRNVARAWAYETGVVVGQDIGPEMPYNDY 246

Query: 331 IKYFAPECSLRI 342
            +YF P+  L +
Sbjct: 247 YEYFGPDYKLDV 258


>gi|164663425|ref|XP_001732834.1| hypothetical protein MGL_0609 [Malassezia globosa CBS 7966]
 gi|159106737|gb|EDP45620.1| hypothetical protein MGL_0609 [Malassezia globosa CBS 7966]
          Length = 372

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/318 (58%), Positives = 227/318 (71%), Gaps = 2/318 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKP RL +T+ LV  Y LHK M +Y P  A   EL  FH +DYV+FL   TP T      
Sbjct: 1   MKPARLALTNRLVHGYGLHKYMSVYSPRWASREELEMFHDSDYVDFLSTATPSTP--LSS 58

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             T++N  +DCPVF+ +++FC+ YAG ++ AARRL     DIAINW GGLHHAKK EASG
Sbjct: 59  AFTRFNFADDCPVFDGMYDFCRAYAGSSLAAARRLAAGATDIAINWTGGLHHAKKFEASG 118

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCYIND+VL ILELL+   RVLYIDID+HHGDGV+EAFY ++RVMTVSFHK+G+ FFP T
Sbjct: 119 FCYINDIVLAILELLRTFPRVLYIDIDIHHGDGVQEAFYTSNRVMTVSFHKYGNDFFPCT 178

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           GD+ E G   GK + +NVPL+DGIDD ++  LFK++I   V T+ P AIVLQCGADSL  
Sbjct: 179 GDISETGVGLGKHFCLNVPLQDGIDDGAYVCLFKSVIEPCVYTFQPSAIVLQCGADSLGL 238

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
           DRLGCFNLSI  H ECV F K F LP+LV GGGGYT  NVARCWT ET +L  T++P+++
Sbjct: 239 DRLGCFNLSIAAHGECVAFTKAFGLPMLVLGGGGYTIRNVARCWTYETSVLTGTQIPDDL 298

Query: 326 PENEYIKYFAPECSLRIP 343
           P   Y  +FAP   L  P
Sbjct: 299 PHTPYDAFFAPTHRLHEP 316


>gi|378730780|gb|EHY57239.1| histone deacetylase HOS2 [Exophiala dermatitidis NIH/UT8656]
          Length = 502

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/384 (51%), Positives = 249/384 (64%), Gaps = 22/384 (5%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+ ++  V + +FG  HPMKP RL +T  LVLSY +H  M+ Y    A   E+A+FH  
Sbjct: 46  VSWHHNPAVENHHFGQTHPMKPWRLTLTKSLVLSYGMHTAMDTYISRAATRDEIAEFHKE 105

Query: 67  DYVEFLHRITPDTQHLFRQELTK---------YNLGEDCPVFENLFEFCQIYAGGTIDAA 117
           +YVEFL+  TP   +    EL           + +GEDCP+F+ L+ FC  YAG +IDAA
Sbjct: 106 EYVEFLNVATPQNIYEMYPELATGPQGYTSSIFGVGEDCPIFDGLYAFCTNYAGASIDAA 165

Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
           R+L NQ  DIAINW+GGLHHAKK EASGFCY+ND+VL IL+LL+YH RVLYIDIDVHHGD
Sbjct: 166 RKLVNQQSDIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRYHPRVLYIDIDVHHGD 225

Query: 178 GVEEAFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIG----EREGKFYAINVPLKDGIDDT 232
           GVE+AF+ TDRVM VSFHK+  ++FFPGTG +   G    +  GK Y INVPL DGIDD 
Sbjct: 226 GVEQAFWSTDRVMCVSFHKYDKEVFFPGTGPLDSTGPLHPDNPGKNYTINVPLNDGIDDD 285

Query: 233 SFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPL 292
            +  LF+ +I   ++ Y P AIVLQCGADSL  DRLGCFNL+I GH  CV FVK F +P+
Sbjct: 286 GYAYLFQNVIEPTIKIYKPTAIVLQCGADSLGHDRLGCFNLNIRGHGRCVDFVKSFRIPM 345

Query: 293 LVTGGGGYTKENVARCWTVETGILL--DTELPNEIPEN-EYIKYFAPECSLRIPN----- 344
           LV GGGGYT  NVAR W  ET I +  D  L   +PE+  Y + F  E     PN     
Sbjct: 346 LVVGGGGYTPRNVARAWAHETSICIGADKNLNPALPEHLPYREAFRREGLTLFPNLGGWR 405

Query: 345 GHIVCSFKEIDKFILFNKQILYFI 368
              + S  +I++ I   ++ L +I
Sbjct: 406 KENMNSRADIERIIRHVREQLSYI 429


>gi|395728991|ref|XP_003775468.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 1-like [Pongo
           abelii]
          Length = 496

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/354 (51%), Positives = 246/354 (69%), Gaps = 15/354 (4%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YD DVG+ Y+  +HPMKPH++  TH+L+ SY LH K+EI  PHK    E+ +
Sbjct: 7   TRRKVCYYYDRDVGNYYYRQDHPMKPHQIXTTHNLLPSYGLHXKIEICHPHKPSTEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +H  DY++FL  I  D      +++ ++++G+DCPV   LFEF Q+  GG++ +A +LN 
Sbjct: 67  YHRDDYIKFLRSIRSDYMFEHSKQMXRFSVGKDCPVLVGLFEFLQLSTGGSVASAVKLNK 126

Query: 123 QLCDIAINWAGGLHHAKKCEA------SGFCYINDLVLGILELLKYHARVLYIDIDVHHG 176
           Q  DIA+NWAGGL+HAKK  A      SGF YIND+VL ILELL YH RVLYIDID+HHG
Sbjct: 127 QQIDIAVNWAGGLNHAKKPLASITSMTSGFYYINDIVLAILELLTYHQRVLYIDIDIHHG 186

Query: 177 DGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTR 236
           DG+EEAFY TD VMT+S  K+G+  F GT D+++ G  +GK+YAIN  L DGIDD S+  
Sbjct: 187 DGMEEAFYTTDWVMTMSSPKYGE-NFSGTRDLQDTGAGKGKYYAINYLLXDGIDDKSYEA 245

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGH--------AECVRFVKKF 288
           +FK +  KV+E + P A++LQC +DSL+GD LGCFNL I  H        A+C+ FVK F
Sbjct: 246 IFKLVTFKVIEMFQPSAVLLQCDSDSLSGDWLGCFNLIIKAHAGLGGGAYAKCMEFVKSF 305

Query: 289 NLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           NLP+L+ GG G    NVA CWT ETG+ LDTE+PNE+P  +Y++   P+  LRI
Sbjct: 306 NLPMLMLGGSGSIICNVAXCWTYETGVALDTEIPNELPYGDYLEXLGPDFKLRI 359


>gi|8886514|gb|AAF80490.1|AF164342_1 histone deacetylase HosA [Emericella nidulans]
          Length = 481

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/351 (51%), Positives = 242/351 (68%), Gaps = 13/351 (3%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LVL+Y +H  M++Y    A   EL+ FH+
Sbjct: 38  RVSWHANPAVELHHFGQSHPMKPWRLTLTKQLVLAYGMHHAMDLYHCRAATVEELSDFHT 97

Query: 66  ADYVEFLHRITP----DTQHL-FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
           +DY++FL  + P    D Q   F + + ++N G+DCP+F+ LF++C +YAG ++DAAR+L
Sbjct: 98  SDYLDFLQTVVPGDMNDAQSKDFSENIVRFNFGDDCPIFDGLFQYCSLYAGASLDAARKL 157

Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
            N   DIAINW+GGLHHAKK EASGFCY+ND+VL IL+LL+ H RV+YIDIDVHHGDGVE
Sbjct: 158 CNNQADIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRIHPRVMYIDIDVHHGDGVE 217

Query: 181 EAFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFT 235
           +AF+ TDRV+TVSFHK+  + FFPGTG +   G       G  +A+NVPL DGIDD S+ 
Sbjct: 218 QAFWSTDRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDGIDDESYV 277

Query: 236 RLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
           +LFK ++   V  + P AIVLQCGADSL  DRLGCFNL++  H  CV + K F LP+LV 
Sbjct: 278 QLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTKTFGLPMLVV 337

Query: 296 GGGGYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
           GGGGYT  NV+R W  ET IL+D +  +   IP N  +  +F P+ SL  P
Sbjct: 338 GGGGYTPRNVSRAWAHETSILIDAQDKINPVIPSNVAFRNHFGPDFSLFPP 388


>gi|67526697|ref|XP_661410.1| hypothetical protein AN3806.2 [Aspergillus nidulans FGSC A4]
 gi|40740824|gb|EAA60014.1| hypothetical protein AN3806.2 [Aspergillus nidulans FGSC A4]
 gi|259481637|tpe|CBF75342.1| TPA: Histone deacetylase HosA [Source:UniProtKB/TrEMBL;Acc:Q9P4F4]
           [Aspergillus nidulans FGSC A4]
          Length = 482

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/352 (51%), Positives = 242/352 (68%), Gaps = 14/352 (3%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++S+  +  V   +FG +HPMKP RL +T  LVL+Y +H  M++Y    A   EL+ FH+
Sbjct: 38  RVSWHANPAVELHHFGQSHPMKPWRLTLTKQLVLAYGMHHAMDLYHCRAATVEELSDFHT 97

Query: 66  ADYVEFLHRITP----DTQHL--FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           +DY++FL  + P    D Q    F + + ++N G+DCP+F+ LF++C +YAG ++DAAR+
Sbjct: 98  SDYLDFLQTVVPGDMNDAQASKDFSENIVRFNFGDDCPIFDGLFQYCSLYAGASLDAARK 157

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           L N   DIAINW+GGLHHAKK EASGFCY+ND+VL IL+LL+ H RV+YIDIDVHHGDGV
Sbjct: 158 LCNNQADIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRIHPRVMYIDIDVHHGDGV 217

Query: 180 EEAFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSF 234
           E+AF+ TDRV+TVSFHK+  + FFPGTG +   G       G  +A+NVPL DGIDD S+
Sbjct: 218 EQAFWSTDRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDGIDDESY 277

Query: 235 TRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLV 294
            +LFK ++   V  + P AIVLQCGADSL  DRLGCFNL++  H  CV + K F LP+LV
Sbjct: 278 VQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTKTFGLPMLV 337

Query: 295 TGGGGYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIP 343
            GGGGYT  NV+R W  ET IL+D +  +   IP N  +  +F P+ SL  P
Sbjct: 338 VGGGGYTPRNVSRAWAHETSILIDAQDKINPVIPSNVAFRNHFGPDFSLFPP 389


>gi|227206286|dbj|BAH57198.1| AT5G63110 [Arabidopsis thaliana]
          Length = 378

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 171/258 (66%), Positives = 211/258 (81%), Gaps = 1/258 (0%)

Query: 85  QELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 144
           + L ++N+GEDCPVF+ LF+FC+  AGG+I AA +LN Q  DIAINW GGLHHAKK EAS
Sbjct: 8   RNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEAS 67

Query: 145 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 204
           GFCY+ND+VLGILELLK   RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHKFGD FFPG
Sbjct: 68  GFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPG 126

Query: 205 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 264
           TG ++++G  +GK+YA+NVPL DG+DD SF  LF+ +I KV+E Y P A+VLQCGADSL+
Sbjct: 127 TGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLS 186

Query: 265 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 324
           GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT  NVARCW  ET + +  E  N+
Sbjct: 187 GDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNK 246

Query: 325 IPENEYIKYFAPECSLRI 342
           +P NEY +YF P+ +L +
Sbjct: 247 LPYNEYFEYFGPDYTLHV 264


>gi|395323204|gb|EJF55691.1| hypothetical protein DICSQDRAFT_73148 [Dichomitus squalens LYAD-421
           SS1]
          Length = 582

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 242/342 (70%), Gaps = 3/342 (0%)

Query: 8   SYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSAD 67
           S  +  DV +  +G +H MKP R+ +TH LV +YD+  KM + RP +A P  + +FH+ +
Sbjct: 17  STGHSADVAAYSYGVHHAMKPQRMRITHELVQAYDMLPKMSVLRPKRATPEVMTRFHTDE 76

Query: 68  YVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDI 127
           Y+ FL ++T +       + T++ +GED P FE +FEF  I AGG+I AA+RL     DI
Sbjct: 77  YINFLTKVTHENVRRLTYQGTRFLIGEDNPPFEGVFEFSSISAGGSIAAAKRLMEGQSDI 136

Query: 128 AINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTD 187
            INWAGGLHHAKK EASGFCYIND+VLGILE+L+Y  RVLYIDID HHGDGVEEAF+ TD
Sbjct: 137 TINWAGGLHHAKKREASGFCYINDIVLGILEMLRYVPRVLYIDIDCHHGDGVEEAFWMTD 196

Query: 188 RVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVE 247
           RVMT+S HKFG+ FFPGTG +++ G  +G  Y++N+PLKDGI D S+  +F+ ++ K+++
Sbjct: 197 RVMTLSLHKFGE-FFPGTGLLEDRGRDKGFGYSVNIPLKDGITDESYKSIFEPVVDKILD 255

Query: 248 TYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVAR 307
            + P AIVLQCGADSL+GD+LG  NL++ GH  CV++++  N+PL++ GGGGYT +NVAR
Sbjct: 256 VFRPSAIVLQCGADSLSGDKLGGLNLTMHGHGRCVQYIRSKNIPLMLLGGGGYTVKNVAR 315

Query: 308 CWTVETGILL--DTELPNEIPENEYIKYFAPECSLRIPNGHI 347
            WT ET   L  + ++   +P NEY ++F P   L +   ++
Sbjct: 316 AWTYETACALGIENDIDPNLPWNEYFEWFGPRYRLEVQESNL 357


>gi|325183227|emb|CCA17685.1| histone deacetylase putative [Albugo laibachii Nc14]
          Length = 346

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 161/263 (61%), Positives = 214/263 (81%), Gaps = 1/263 (0%)

Query: 81  HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 140
           H + ++L ++N+GEDCPVF+ +FEFCQ+YA  +I  A +LN +  DI INW+GGLHHAK+
Sbjct: 2   HEYVRQLQRFNVGEDCPVFDGIFEFCQLYASASIGGAAKLNEKSADIVINWSGGLHHAKR 61

Query: 141 CEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
            EASGFCYIND VLGILELLK H RVLYIDID+HHGDGVEEAFY T+RVMT SFHK+G+ 
Sbjct: 62  SEASGFCYINDCVLGILELLKTHQRVLYIDIDIHHGDGVEEAFYTTNRVMTCSFHKYGE- 120

Query: 201 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 260
           +FPGTGD+K+IG  EGK YA+N P +DG+DD +FT +F+++I+ +++ +AP A+++QCG 
Sbjct: 121 YFPGTGDIKDIGYGEGKNYAVNFPCRDGMDDEAFTSIFRSVIATIMQHFAPDAVLMQCGT 180

Query: 261 DSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 320
           DSL+GDRLGCFNLS+ GHA+CV +V+ FN+P+LV GGGGYT  NVARCW  ET +L + E
Sbjct: 181 DSLSGDRLGCFNLSVKGHADCVAYVRSFNIPMLVVGGGGYTLRNVARCWCYETSVLTNVE 240

Query: 321 LPNEIPENEYIKYFAPECSLRIP 343
           +P+ +P N+Y +YF PE  + +P
Sbjct: 241 IPDAMPYNDYFEYFGPEYRIHMP 263


>gi|387593754|gb|EIJ88778.1| histone deacetylase [Nematocida parisii ERTm3]
 gi|387595061|gb|EIJ92687.1| histone deacetylase [Nematocida parisii ERTm1]
          Length = 369

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/337 (51%), Positives = 235/337 (69%), Gaps = 8/337 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +I+YFY  D GS ++G +HPMKPHR+ +T+ +V +Y L K M+I+    A  +E+ Q+H+
Sbjct: 3   RIAYFYSPDSGSFHYGASHPMKPHRIAVTNSIVFAYGLQKYMDIFAIKPATKMEMQQYHT 62

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+  L     D        +    + +DCP FE + E C +Y+GG++ AAR LN    
Sbjct: 63  EEYISSLISEGSD--------VPCDRITDDCPYFEGIGEMCALYSGGSLQAARALNQSQY 114

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK   SGFCY ND+VL I ELLK H +V+YIDID+HHGDGVEEAFY 
Sbjct: 115 DIAINWSGGLHHAKKAGPSGFCYTNDIVLAIQELLKKHRKVMYIDIDIHHGDGVEEAFYH 174

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRV+T+SFHK+GD FFPGTG++   G   G+  A+NVPL  GIDD S+  +FK ++   
Sbjct: 175 TDRVLTLSFHKYGDRFFPGTGNICCTGRGAGRGCAVNVPLDFGIDDESYHYVFKNVVKMC 234

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E++ P AI++QCG+DSLA DR+GCF LSI GH+ECVR+V+ FN+P+LV GGGGY  ++V
Sbjct: 235 IESFGPEAILMQCGSDSLAADRIGCFGLSIKGHSECVRYVRDFNIPMLVVGGGGYKPKHV 294

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           +RCW  ET IL   E+ N+IP N + +Y   +  L I
Sbjct: 295 SRCWASETAILCGVEVDNKIPPNPHSEYLGEDAELYI 331


>gi|295661414|ref|XP_002791262.1| histone deacetylase phd1 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226280824|gb|EEH36390.1| histone deacetylase phd1 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 487

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/352 (51%), Positives = 244/352 (69%), Gaps = 20/352 (5%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  +  V   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FHS+
Sbjct: 43  VSWHANPLVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHHAMDLYKTRQATYEEMAEFHSS 102

Query: 67  DYVEFLHRITP----DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +Y++FL  + P    DT       ++ +N+G+DCPVF+ LF++C  YAGGT+DAAR+L N
Sbjct: 103 EYLDFLQSVIPADMDDTA--LSDRISSFNIGDDCPVFDGLFDYCSHYAGGTLDAARKLCN 160

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
               IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ + RV+YIDIDVHHGDGVE+A
Sbjct: 161 NQSAIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRLYPRVMYIDIDVHHGDGVEQA 220

Query: 183 FYFTDRVMTVSFHKFGDL-FFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRL 237
           F+ TDRV+TVSFHK+    FFPGTG + + G       G  +A+NVPL DGI+D  +  L
Sbjct: 221 FWSTDRVLTVSFHKYDKTNFFPGTGGLDDTGPPNPLNPGAHHALNVPLHDGIEDGDYISL 280

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F++II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GG
Sbjct: 281 FQSIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVLGG 340

Query: 298 GGYTKENVARCWTVETGILLDT------ELPNEIPENEYIKYFAPECSLRIP 343
           GGYT  NV+R W  ET I +D       +LP+ +P   +  +F P+C+L  P
Sbjct: 341 GGYTPRNVSRLWAYETAICIDAASQLNPKLPDCLP---FRNHFKPDCTLFPP 389


>gi|392592714|gb|EIW82040.1| histone deacetylase RPD3 [Coniophora puteana RWD-64-598 SS2]
          Length = 528

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 247/342 (72%), Gaps = 3/342 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK +ISY+YD +VGS  +G  H MKPHR+ M H L+ +Y + +KM + R  +A    +  
Sbjct: 2   SKKRISYYYDPEVGSYTYGLGHLMKPHRIRMAHELITAYGMLEKMSVLRAKRASAESMTA 61

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FH+ +Y+ FL R+TP+T        T++ LG+D P F+ +FE+  I AGG++ AARR+ +
Sbjct: 62  FHTDEYIHFLSRVTPETADELTYNGTRFLLGDDNPPFDGVFEYSSISAGGSLAAARRIQD 121

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINWAGGLHHAKK EASGFCYIND+VL ILELL+ +ARVLYID+D HHGDGVEEA
Sbjct: 122 GAADIAINWAGGLHHAKKREASGFCYINDIVLCILELLRTYARVLYIDVDCHHGDGVEEA 181

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMT S HKFG+ FFPGTG + + G  +GK Y++NVPLKDGI D S+  +F+ +I
Sbjct: 182 FYTTDRVMTCSLHKFGE-FFPGTGTLDDKGYGKGKGYSVNVPLKDGIRDDSYKSVFEPVI 240

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            K++E + P A+VLQ GADSLAGD+LGCFNL++ GHA CV F++   LPL++ GGGGYT 
Sbjct: 241 GKILEVFRPSAVVLQLGADSLAGDKLGCFNLTMHGHANCVTFLRNAGLPLVLLGGGGYTT 300

Query: 303 ENVARCWTVETGILL--DTELPNEIPENEYIKYFAPECSLRI 342
           +NVAR WT ETG+ L  + EL + +P   + +++ P   L +
Sbjct: 301 KNVARAWTYETGVALNMEQELDDNLPWCSHFEWYGPRYKLEV 342


>gi|225680492|gb|EEH18776.1| histone deacetylase [Paracoccidioides brasiliensis Pb03]
          Length = 487

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/352 (51%), Positives = 243/352 (69%), Gaps = 20/352 (5%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  +  V   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FHS+
Sbjct: 43  VSWHANPLVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHHAMDLYKTRQATYEEMAEFHSS 102

Query: 67  DYVEFLHRITP----DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +Y++FL  + P    DT       ++ +N+G+DCPVF+ LF +C  YAGGT+DAAR+L N
Sbjct: 103 EYLDFLQSVIPADMDDTA--LSDRISSFNIGDDCPVFDGLFNYCSHYAGGTLDAARKLCN 160

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
               IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ + RV+YIDIDVHHGDGVE+A
Sbjct: 161 NQSAIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRLYPRVMYIDIDVHHGDGVEQA 220

Query: 183 FYFTDRVMTVSFHKFGDL-FFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRL 237
           F+ TDRV+TVSFHK+    FFPGTG + + G       G  +A+NVPL DGI+D  +  L
Sbjct: 221 FWSTDRVLTVSFHKYDKTNFFPGTGGLDDTGPPNPLNPGAHHALNVPLHDGIEDGDYVSL 280

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F++II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GG
Sbjct: 281 FQSIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVLGG 340

Query: 298 GGYTKENVARCWTVETGILLDT------ELPNEIPENEYIKYFAPECSLRIP 343
           GGYT  NV+R W  ET I +D       +LP+ +P   +  +F P+C+L  P
Sbjct: 341 GGYTPRNVSRLWAYETAICIDAASQLNPKLPDCLP---FRNHFKPDCTLFPP 389


>gi|226292872|gb|EEH48292.1| histone deacetylase phd1 [Paracoccidioides brasiliensis Pb18]
          Length = 487

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/352 (51%), Positives = 243/352 (69%), Gaps = 20/352 (5%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  +  V   +FG +HPMKP RL +T  +V++Y +H  M++Y+  +A   E+A+FHS+
Sbjct: 43  VSWHANPLVEPHHFGSSHPMKPWRLTLTKQIVMAYGMHHAMDLYKTRQATYEEMAEFHSS 102

Query: 67  DYVEFLHRITP----DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +Y++FL  + P    DT       ++ +N+G+DCPVF+ LF +C  YAGGT+DAAR+L N
Sbjct: 103 EYLDFLQSVIPADMDDTA--LSDRISSFNIGDDCPVFDGLFNYCSHYAGGTLDAARKLCN 160

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
               IAINW+GGLHHAKK EASGFCYIND+VLGIL+LL+ + RV+YIDIDVHHGDGVE+A
Sbjct: 161 NQSAIAINWSGGLHHAKKSEASGFCYINDIVLGILQLLRLYPRVMYIDIDVHHGDGVEQA 220

Query: 183 FYFTDRVMTVSFHKFGDL-FFPGTGDVKEIGE----REGKFYAINVPLKDGIDDTSFTRL 237
           F+ TDRV+TVSFHK+    FFPGTG + + G       G  +A+NVPL DGI+D  +  L
Sbjct: 221 FWSTDRVLTVSFHKYDKTNFFPGTGGLDDTGPPNPLNPGAHHALNVPLHDGIEDGDYVSL 280

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F++II   + TY PGAIVLQCGADSL  DRLGCFNL+I  H  CV + K F LP LV GG
Sbjct: 281 FQSIIGPCIRTYQPGAIVLQCGADSLGCDRLGCFNLNIRAHGACVAYTKTFGLPTLVLGG 340

Query: 298 GGYTKENVARCWTVETGILLDT------ELPNEIPENEYIKYFAPECSLRIP 343
           GGYT  NV+R W  ET I +D       +LP+ +P   +  +F P+C+L  P
Sbjct: 341 GGYTPRNVSRLWAYETAICIDAASQLNPKLPDCLP---FRNHFKPDCTLFPP 389


>gi|145533268|ref|XP_001452384.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420072|emb|CAK84987.1| unnamed protein product [Paramecium tetraurelia]
          Length = 443

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/349 (50%), Positives = 241/349 (69%), Gaps = 11/349 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM--------EIYRPHKA 55
           K K++Y+YD + G+  +   HPMKP R+ +T  LV  Y L + M        + Y     
Sbjct: 24  KQKVTYYYDEEFGTYNYSTTHPMKPLRVAITDDLVGHYGLKQYMNCIDQSFVQTYIKRVD 83

Query: 56  YPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTID 115
             V L QFHS +Y++ +  ITP+ +  +  +L ++N  EDCPV + LF+FC     G++ 
Sbjct: 84  EDV-LTQFHSYEYIDLIKIITPENKCQYEDQLYRFNFMEDCPVLDRLFDFCLCQTSGSVG 142

Query: 116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH 175
           AA  + +Q  +IAINW+GGLHHAK+ EASGFCY+ND VLGILELLK + RVLY+DID+HH
Sbjct: 143 AACVIADQKSNIAINWSGGLHHAKQSEASGFCYVNDCVLGILELLKTYQRVLYVDIDIHH 202

Query: 176 GDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFT 235
           GDGVEEAFY TDRVMT SFHKF + +FPGTG + ++G  +GK+YA+N PL +G++D S  
Sbjct: 203 GDGVEEAFYLTDRVMTCSFHKFKE-YFPGTGHIDDVGHDKGKYYAVNFPLNEGLNDDSIQ 261

Query: 236 RLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
            +FK +I K++E + P  ++LQ G DSL+GDRLGCFNLSI GH  C+ ++KKFN+P+++ 
Sbjct: 262 HIFKPVIDKIMENFRPDVVMLQGGTDSLSGDRLGCFNLSIKGHGTCIEYLKKFNVPIIMV 321

Query: 296 GGGGYTKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSLRIP 343
           GGGGYT  NV RCWT ET + L+  + + IP E+EY  YF PE  L +P
Sbjct: 322 GGGGYTLRNVPRCWTYETSLALNVPIQDNIPDESEYKVYFGPEYKLHLP 370


>gi|323333618|gb|EGA75011.1| Hos2p [Saccharomyces cerevisiae AWRI796]
          Length = 385

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/296 (58%), Positives = 221/296 (74%), Gaps = 2/296 (0%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEF 105
           M++Y    A   EL QFHS DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++
Sbjct: 1   MDLYETRSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDY 60

Query: 106 CQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHAR 165
             +Y G ++DA R+L N   DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH+R
Sbjct: 61  TTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHSR 120

Query: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPL 225
           +LYIDID+HHGDGV+EAFY TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL
Sbjct: 121 ILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPL 180

Query: 226 KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV 285
           +DGIDD S+  LFK+I+  ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FV
Sbjct: 181 EDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFV 240

Query: 286 KKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           K F LP+LV GGGGYT  NV+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 241 KSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 296


>gi|323337528|gb|EGA78773.1| Hos2p [Saccharomyces cerevisiae Vin13]
 gi|365765760|gb|EHN07266.1| Hos2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 385

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/296 (58%), Positives = 220/296 (74%), Gaps = 2/296 (0%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEF 105
           M++Y    A   EL QFHS DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++
Sbjct: 1   MDLYETRSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDY 60

Query: 106 CQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHAR 165
             +Y G ++DA R+L N   DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R
Sbjct: 61  TTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPR 120

Query: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPL 225
           +LYIDID+HHGDGV+EAFY TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL
Sbjct: 121 ILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPL 180

Query: 226 KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV 285
           +DGIDD S+  LFK+I+  ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FV
Sbjct: 181 EDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFV 240

Query: 286 KKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           K F LP+LV GGGGYT  NV+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 241 KSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 296


>gi|323304959|gb|EGA58713.1| Hos2p [Saccharomyces cerevisiae FostersB]
          Length = 385

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/296 (58%), Positives = 220/296 (74%), Gaps = 2/296 (0%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEF 105
           M++Y    A   EL QFHS DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++
Sbjct: 1   MDLYETRSATRDELLQFHSXDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDY 60

Query: 106 CQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHAR 165
             +Y G ++DA R+L N   DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R
Sbjct: 61  TTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPR 120

Query: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPL 225
           +LYIDID+HHGDGV+EAFY TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL
Sbjct: 121 ILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPL 180

Query: 226 KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV 285
           +DGIDD S+  LFK+I+  ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FV
Sbjct: 181 EDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFV 240

Query: 286 KKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           K F LP+LV GGGGYT  NV+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 241 KSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 296


>gi|323309190|gb|EGA62416.1| Hos2p [Saccharomyces cerevisiae FostersO]
          Length = 385

 Score =  369 bits (948), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 173/296 (58%), Positives = 220/296 (74%), Gaps = 2/296 (0%)

Query: 47  MEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEF 105
           M++Y    A   EL QFHS DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++
Sbjct: 1   MDLYETRSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDY 60

Query: 106 CQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHAR 165
             +Y G ++DA R+L N   DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R
Sbjct: 61  TTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPR 120

Query: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPL 225
           +LYIDID+HHGDGV+EAFY TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL
Sbjct: 121 ILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPL 180

Query: 226 KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV 285
           +DGIDD S+  LFK+I+  ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FV
Sbjct: 181 EDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFV 240

Query: 286 KKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
           K F LP+LV GGGGYT  NV+R WT ETGIL D  LP +IPE+  +   F P+ SL
Sbjct: 241 KSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 296


>gi|145497537|ref|XP_001434757.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401885|emb|CAK67360.1| unnamed protein product [Paramecium tetraurelia]
          Length = 417

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 177/343 (51%), Positives = 238/343 (69%), Gaps = 4/343 (1%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKME-IYRPHKAYPVE-LA 61
           K K++Y+YD + G+  +   HPMKP R+ +T  LV  Y L + M  I R       + L 
Sbjct: 5   KQKVTYYYDEEFGTFNYSTTHPMKPLRVAITDDLVGHYGLKQYMNCIVRCINLVDEDVLT 64

Query: 62  QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
           QFHS +Y+  +  ITP+ +     +L ++N  EDCPV + LF+FC     G++ AA  + 
Sbjct: 65  QFHSEEYINLIKIITPENKCQHEDQLYRFNFMEDCPVLDRLFDFCLCQTSGSVGAACVIA 124

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +Q  +IAINW+GGLHHAK+ EASGFCY+ND VLGILELLK + RVLYIDID+HHGDGVEE
Sbjct: 125 DQKSNIAINWSGGLHHAKQSEASGFCYVNDCVLGILELLKTYQRVLYIDIDIHHGDGVEE 184

Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
           AFY TDRVMT SFHKF + +FPGTG + +IG  +GK+YA+N PL +G++D S   +FK +
Sbjct: 185 AFYLTDRVMTCSFHKFKE-YFPGTGHIDDIGHDKGKYYAVNFPLNEGLNDDSIQLIFKPV 243

Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           I  ++E + P  ++LQ G DSL+GDRLGCFNLSI GH  C  ++KKFN+P+++ GGGGYT
Sbjct: 244 IDSIMENFRPDVVMLQGGTDSLSGDRLGCFNLSIKGHGSCTEYLKKFNVPIIMVGGGGYT 303

Query: 302 KENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSLRIP 343
             NV RCWT ET + L+  +P+ IP E++Y  YF PE  L +P
Sbjct: 304 LRNVPRCWTYETSLALNVPIPDNIPDESDYKIYFGPEYKLHLP 346


>gi|397471284|ref|XP_003807226.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 1-like [Pan
           paniscus]
          Length = 476

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 184/348 (52%), Positives = 242/348 (69%), Gaps = 23/348 (6%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           ++ K+ Y+YDGDVG+ Y+  +HPMKPH++  TH+L+ SY LH  +EI  PHK    E+ +
Sbjct: 7   TRRKVCYYYDGDVGNXYYRQDHPMKPHQIXTTHNLLPSYGLHXTIEICHPHKPSTEEMTK 66

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +H  DY++FL  I+ DT         ++N+G+DCPVF  LFEF Q+  GG++ +A +LN 
Sbjct: 67  YHRDDYIKFLRPISSDTCSSTASRC-RFNVGKDCPVFNGLFEFLQLSTGGSLASAVKLNK 125

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA+NWAGGL+HAKK EASGF YIND+VL ILELL YH RVLYIDID+HHGDG+EEA
Sbjct: 126 QQIDIAVNWAGGLNHAKKPEASGFYYINDIVLAILELLTYHQRVLYIDIDIHHGDGMEEA 185

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TD VMT+S  K GD  F GT D+++IG  +GK+YA+N  L+DGIDD S+  +     
Sbjct: 186 FYTTDWVMTMSSPKXGD-NFSGTRDLQDIGAGKGKYYAVNYLLRDGIDDKSYEAI----- 239

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSID--------GHAECVRFVKKFNLPLLV 294
                     A++LQCG+DSL+GD LGCFNL I         GHA+C+ FVK FNLP+L+
Sbjct: 240 --------SSAVLLQCGSDSLSGDWLGCFNLIIKAHAGLGXGGHAKCMEFVKSFNLPMLM 291

Query: 295 TGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
            GG G    NVA CWT ETG+ LDTE+PNE+P ++Y++ F P+  L I
Sbjct: 292 LGGSGXPICNVAXCWTYETGVALDTEIPNELPYSDYLEXFGPDFKLHI 339


>gi|440632070|gb|ELR01989.1| hypothetical protein GMDG_05158 [Geomyces destructans 20631-21]
          Length = 589

 Score =  369 bits (947), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 7/342 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +ISY+YD DV + Y+  +HPM+P R+ MTH L++   ++KK+ I R   A   E+  FH+
Sbjct: 23  RISYYYDEDVANHYYREDHPMEPQRIKMTHSLIMHTGIYKKLSILRAKPATADEMKNFHA 82

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
            +YV+FL R+TP+T     +E   + LGE DCP FE +F F  I A G+++ A +L    
Sbjct: 83  DEYVDFLERVTPETVLPPPEEC--FGLGENDCPAFEEVFRFSAISAAGSLEGAAKLGLNN 140

Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
           CDIAINWAGGLHHA K +ASGFCYIND+VLGILELL+++ RVLYIDIDVHHGD VE AF 
Sbjct: 141 CDIAINWAGGLHHAMKSQASGFCYINDIVLGILELLRHYPRVLYIDIDVHHGDAVETAFL 200

Query: 185 FTDRVMTVSFHKFGDL--FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
            TDRVMT SFH++     FFP TG + ++G  EG+ +++N PL  GIDD S+  +F+ +I
Sbjct: 201 TTDRVMTASFHQYSPSAGFFPQTGSLSDVGRGEGRNFSVNFPLSKGIDDASYKGIFEPVI 260

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
            +++  + P  IVLQCGADSL  D+LG  NLS+ GHA C+ FVK+ ++P LV GGGGYT 
Sbjct: 261 EEIMARFCPSVIVLQCGADSLNQDKLGGLNLSMRGHANCIEFVKRLSVPTLVLGGGGYTI 320

Query: 303 ENVARCWTVETGILLDTEL-PNEIPEN-EYIKYFAPECSLRI 342
            NVAR W  ETG+L+ T+L P+++P N EY +Y+AP+  L +
Sbjct: 321 RNVARTWAYETGVLVGTDLQPSDLPVNDEYYEYYAPDYKLDV 362


>gi|384496818|gb|EIE87309.1| hypothetical protein RO3G_12020 [Rhizopus delemar RA 99-880]
          Length = 427

 Score =  369 bits (947), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/338 (52%), Positives = 223/338 (65%), Gaps = 42/338 (12%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK K++YF+D  VG+ ++G  HPMKPHRL +T+HLVL Y LH+KMEI++P +A   E+  
Sbjct: 26  SKKKVAYFHDEGVGNYHYGERHPMKPHRLTLTNHLVLKYGLHEKMEIFQPRRATDSEIRN 85

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DYV+FL ++TPD    +     ++N+G+DCP+F+ +++FCQ YAG TI+A+R    
Sbjct: 86  FHSEDYVDFLKKVTPDNADEYENLFQRFNVGDDCPIFDGIYDFCQRYAGATIEASR---- 141

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
                                                 KY  RVLYIDID+HHGDGV+EA
Sbjct: 142 --------------------------------------KYFPRVLYIDIDIHHGDGVQEA 163

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVS HK+   FFP TG + EIG   GK+Y++NVPL+DGIDD ++  LFK +I
Sbjct: 164 FYSTDRVMTVSLHKYNGDFFPATGHIDEIGSSLGKYYSVNVPLRDGIDDDAYVWLFKEVI 223

Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             V+ TY P AIVLQCGADSL  DRLGCFNLSI  H  CV+ VK FN+PLLV GGGGYT 
Sbjct: 224 DAVIGTYQPSAIVLQCGADSLGCDRLGCFNLSIRAHGRCVQLVKNFNIPLLVVGGGGYTV 283

Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
            NVARCWT ET +L+DTEL   +P NEY  +F P+  L
Sbjct: 284 RNVARCWTYETSVLVDTELSENLPPNEYRDFFKPDYKL 321


>gi|392580278|gb|EIW73405.1| hypothetical protein TREMEDRAFT_24902 [Tremella mesenterica DSM
           1558]
          Length = 358

 Score =  368 bits (944), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 172/290 (59%), Positives = 220/290 (75%), Gaps = 6/290 (2%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + +FH+ +Y+E L  + PD   +     T+  +GEDCP FE +FEFC I AGG+I AA R
Sbjct: 1   MTRFHTDEYIELLEMVNPDNAEILTGGGTRCLIGEDCPPFEGVFEFCTISAGGSISAAER 60

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           +N+   DIAINWAGGLHHAKK EASGFCY+ND+VL ILELL+ H RVLYID+DVHHGDGV
Sbjct: 61  INSGHADIAINWAGGLHHAKKNEASGFCYVNDIVLAILELLRIHTRVLYIDVDVHHGDGV 120

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMT SFH+FG+ FFPGTGDV+++G   GK YA+NVPL+DGI + SF  +FK
Sbjct: 121 EEAFYTTDRVMTASFHRFGE-FFPGTGDVRDVGMGRGKGYAVNVPLRDGITNESFHYIFK 179

Query: 240 T----IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
                II  +++ + PGA+VLQ GADSL+GD+LG FNL++DGHAEC RFVK FN+P ++ 
Sbjct: 180 PVSSFIIQHIIDWFRPGAVVLQMGADSLSGDKLGGFNLTLDGHAECARFVKSFNIPTIML 239

Query: 296 GGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
           GGGGYT +NVAR WT ET ++   ELP ++P N+Y++Y+ P   L + PN
Sbjct: 240 GGGGYTTKNVARAWTNETAVMCGRELPLDLPYNQYMEYYGPRYKLEVLPN 289


>gi|146181207|ref|XP_001022315.2| Histone deacetylase family protein [Tetrahymena thermophila]
 gi|146144291|gb|EAS02070.2| Histone deacetylase family protein [Tetrahymena thermophila SB210]
          Length = 456

 Score =  367 bits (943), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 177/360 (49%), Positives = 241/360 (66%), Gaps = 23/360 (6%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +ISYFY+ ++G  Y+  +HPMKP R+ M H L+ ++ L+K +++Y   +A   E+ +FH 
Sbjct: 13  RISYFYNPEIGKFYYSKDHPMKPKRVAMAHSLIQNFGLYKDLDVYTARQATFEEMIKFHD 72

Query: 66  ADYVEFLHRITPD--TQHLFR--------------------QELTKYNLGEDCPVFENLF 103
            +Y+ +L     +  TQ L +                    ++ +K     DCP FE L+
Sbjct: 73  IEYINYLQNYVSNGWTQELKKLKQDPLINLESSYHINNPKKRQTSKVGDTSDCPGFEGLY 132

Query: 104 EFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 163
            FCQI AGG++D A  + NQ  DIAINW GGLHHAKK EASGFCY+ND+VL  LELLKY+
Sbjct: 133 NFCQISAGGSLDCASMIINQQSDIAINWGGGLHHAKKKEASGFCYVNDIVLCALELLKYY 192

Query: 164 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINV 223
            RV+YIDIDVHHGDGVEEAF+ T+RVMTVSFH++GD FFPG+G +  IG+  GK++AINV
Sbjct: 193 PRVIYIDIDVHHGDGVEEAFFLTNRVMTVSFHEYGDDFFPGSGSLNSIGDGPGKYHAINV 252

Query: 224 PLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVR 283
           PL+ GI+D +F ++FK ++ KV+E Y P  I+LQCGADSLA D+LG FNLS  GH + V 
Sbjct: 253 PLRPGINDETFEQVFKDVMKKVMEVYRPNVILLQCGADSLAYDKLGHFNLSTKGHGKAVE 312

Query: 284 FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE-YIKYFAPECSLRI 342
           ++K F +PL++ GGGGY   NVARCW  ET I +  ++   IP  E +  YF P+  L +
Sbjct: 313 YMKSFGIPLILMGGGGYNVPNVARCWAYETSICVGNKIDGNIPITEPFYDYFGPDHKLHV 372


>gi|145527340|ref|XP_001449470.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417058|emb|CAK82073.1| unnamed protein product [Paramecium tetraurelia]
          Length = 424

 Score =  367 bits (942), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 174/351 (49%), Positives = 238/351 (67%), Gaps = 11/351 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE---- 59
           K K++Y+YD + G+  +   HPMKP R+ +T  LV  Y L + M      +++       
Sbjct: 5   KQKVTYYYDEEFGTFNYSTTHPMKPLRVAITDDLVGHYGLKQYMNCIVQDQSFVQTYIKR 64

Query: 60  -----LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTI 114
                L QFHS +Y++ +  ITP+ +     +L ++N  EDCPV + LF+FC     G++
Sbjct: 65  VDEDVLTQFHSEEYIDLIKIITPENKCQHEDQLYRFNFMEDCPVLDRLFDFCLCQTSGSV 124

Query: 115 DAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVH 174
            AA  + +Q  +IAINW+GGLHHAK+ EASGFCY+ND VLGILELLK + RVLYIDID+H
Sbjct: 125 GAACVIADQKSNIAINWSGGLHHAKQSEASGFCYVNDCVLGILELLKTYQRVLYIDIDIH 184

Query: 175 HGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSF 234
           HGDGVEEAFY TDRVMT SFHKF + +FPGTG + +IG  +GK+YA+N PL +G++D S 
Sbjct: 185 HGDGVEEAFYLTDRVMTCSFHKFKE-YFPGTGHIDDIGHDKGKYYAVNFPLNEGLNDDSI 243

Query: 235 TRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLV 294
             +FK +I  ++E + P  ++LQ G DSL+GDRLGCFNLSI GH  C  ++KKFN+P+++
Sbjct: 244 QLIFKPVIDSIMENFRPDVVMLQGGTDSLSGDRLGCFNLSIKGHGSCTEYLKKFNVPIIM 303

Query: 295 TGGGGYTKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSLRIPN 344
            GGGGYT  NV RCWT ET + L+  +P+ IP E++Y  YF PE  +   N
Sbjct: 304 VGGGGYTLRNVPRCWTYETSLALNVPIPDNIPDESDYKVYFGPEYQITFTN 354


>gi|145475491|ref|XP_001423768.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124390829|emb|CAK56370.1| unnamed protein product [Paramecium tetraurelia]
          Length = 370

 Score =  367 bits (941), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 175/349 (50%), Positives = 240/349 (68%), Gaps = 11/349 (3%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKM--------EIYRPHKA 55
           K  ++Y+YD + G+  +   HPMKP R+ +T  LV  Y L + M        + Y     
Sbjct: 5   KQNVTYYYDEEFGTYNYSTTHPMKPLRVAITDDLVGHYGLKQYMNCIDQSFVQTYIKRVD 64

Query: 56  YPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTID 115
             V L QFHS +Y++ +  ITP+ +  +  +L ++N  EDCPV + LF+FC     G++ 
Sbjct: 65  EDV-LTQFHSYEYIDLIKIITPENKCQYEDQLYRFNFMEDCPVLDRLFDFCLCQTSGSVG 123

Query: 116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH 175
           AA  + +Q  +IAINW+GGLHHAK+ EASGFCY+ND VLGILELLK + RVLY+DID+HH
Sbjct: 124 AACVIADQKSNIAINWSGGLHHAKQSEASGFCYVNDCVLGILELLKTYQRVLYVDIDIHH 183

Query: 176 GDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFT 235
           GDGVEEAFY TDRVMT SFHKF + +FPGTG + ++G  +GK+YA+N PL +G++D S  
Sbjct: 184 GDGVEEAFYLTDRVMTCSFHKFKE-YFPGTGHIDDVGHDKGKYYAVNFPLNEGLNDDSIQ 242

Query: 236 RLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295
            +FK +I K++E + P  ++LQ G DSL+GDRLGCFNLSI GH  C+ ++KKFN+P+++ 
Sbjct: 243 YIFKPVIDKIMENFRPDVVMLQGGTDSLSGDRLGCFNLSIKGHGTCIEYLKKFNVPIIMV 302

Query: 296 GGGGYTKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSLRIP 343
           GGGGYT  NV RCWT ET I L+  + + IP E++Y  YF PE  L +P
Sbjct: 303 GGGGYTLRNVPRCWTYETSIALNVPIQDNIPDESDYKVYFGPEYKLHLP 351


>gi|432107862|gb|ELK32919.1| Histone deacetylase 2 [Myotis davidii]
          Length = 415

 Score =  367 bits (941), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 174/260 (66%), Positives = 215/260 (82%), Gaps = 1/260 (0%)

Query: 89  KYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 148
           + N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASGFCY
Sbjct: 21  RINVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCY 80

Query: 149 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 208
           +ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+
Sbjct: 81  VNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDL 139

Query: 209 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 268
           ++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+GDRL
Sbjct: 140 RDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRL 199

Query: 269 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 328
           GCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+P N
Sbjct: 200 GCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYN 259

Query: 329 EYIKYFAPECSLRIPNGHIV 348
           +Y +YF P+  L I   ++ 
Sbjct: 260 DYFEYFGPDFKLHISPSNMT 279


>gi|405119763|gb|AFR94535.1| histone deacetylase 1-1 [Cryptococcus neoformans var. grubii H99]
          Length = 595

 Score =  366 bits (940), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 170/346 (49%), Positives = 232/346 (67%), Gaps = 51/346 (14%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDL---------------------- 43
           +++Y+YD DVG+  +   HPMKPHR+ M H+L+++Y +                      
Sbjct: 21  RVAYYYDQDVGNYNYYLGHPMKPHRIRMAHNLIVNYGMCDEEGQEHGPAEVWGEGKRAMN 80

Query: 44  ----------------------------HKKMEIYRPHKAYPVELAQFHSADYVEFLHRI 75
                                        K M++++P +A   E+ +FH+ +Y++ L  +
Sbjct: 81  DEITQNWGGGKMGEAEVKWEKAALRGSRSKMMQVFKPRRATKEEMTRFHTDEYIDLLEAV 140

Query: 76  TPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL 135
           TP+T        T+  +GEDCP F+ LFEFC I AGG++ AA RLN    DI INWAGGL
Sbjct: 141 TPETADALTGGGTRCLIGEDCPAFDGLFEFCTISAGGSLGAAERLNAGAADIVINWAGGL 200

Query: 136 HHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 195
           HHAKK EASGFCY+ND+VLGILELL+ H RVLYID+DVHHGDGVEEAFY TDRVMT SFH
Sbjct: 201 HHAKKTEASGFCYVNDIVLGILELLRIHPRVLYIDVDVHHGDGVEEAFYVTDRVMTCSFH 260

Query: 196 KFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIV 255
           +FG+ FFPGTGDV+++G ++GK YA+NVPL+DGI D +F  +FK +I +++  + P A+V
Sbjct: 261 RFGE-FFPGTGDVRDVGMKKGKGYAVNVPLRDGITDETFQSIFKPVIDRIMSHFRPSAVV 319

Query: 256 LQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
           LQ GADS++GD+LG FNL+++GHAEC RF+K FN+P+++ GGGGYT
Sbjct: 320 LQMGADSISGDKLGGFNLTLEGHAECARFIKSFNVPVMMVGGGGYT 365


>gi|378756320|gb|EHY66345.1| histone deacetylase 3 [Nematocida sp. 1 ERTm2]
          Length = 365

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 169/337 (50%), Positives = 234/337 (69%), Gaps = 8/337 (2%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +I+YFY  D GS ++G +HPMKPHR+ +T+ +V +Y L + M+I     A  +E+ Q+H+
Sbjct: 3   RIAYFYSPDSGSFHYGASHPMKPHRIAVTNSIVFAYGLQRYMDIIAIKPATKIEMEQYHT 62

Query: 66  ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
            +Y+  L     D        +    + +DCP FE + E C +Y+GG++ AAR LN    
Sbjct: 63  EEYIASLISEGSD--------VPCDRITDDCPYFEGVGEMCALYSGGSLQAARALNQNQY 114

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK   SGFCY ND+VL I ELLK H +V+YIDID+HHGDGVEEAFY 
Sbjct: 115 DIAINWSGGLHHAKKGGPSGFCYTNDIVLAIQELLKKHTKVMYIDIDIHHGDGVEEAFYH 174

Query: 186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
           TDRV+T+S HK+GD FFPGTG++   G   G+  ++NVPL  GIDD S+  +FK ++   
Sbjct: 175 TDRVLTLSLHKYGDRFFPGTGNICCTGRDAGRGTSVNVPLDFGIDDESYHYVFKNVVKMC 234

Query: 246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
           +E+++P  I++QCG+DSLAGDR+GCF LSI GH+ECVR+V+ FN+P+LV GGGGY  ++V
Sbjct: 235 IESFSPKVILMQCGSDSLAGDRIGCFGLSIKGHSECVRYVRDFNIPMLVVGGGGYKPKHV 294

Query: 306 ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
           +RCW  ET IL   ++ N+IP+N + +Y      L I
Sbjct: 295 SRCWASETAILCGVDVDNKIPQNPHSEYLGEGAELYI 331


>gi|323456831|gb|EGB12697.1| hypothetical protein AURANDRAFT_18932 [Aureococcus anophagefferens]
          Length = 352

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 167/258 (64%), Positives = 214/258 (82%), Gaps = 3/258 (1%)

Query: 87  LTKYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 144
           +T++N+GE  DCPV++ LFEF QI +G +ID A +LN+   DIAINW+GGLHHAKK EAS
Sbjct: 1   MTRFNVGECTDCPVYDGLFEFQQIASGASIDGAVKLNHGATDIAINWSGGLHHAKKSEAS 60

Query: 145 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 204
           GFCYIND+VL ILELLKYHARVLYIDID+HHGDGVEEAFY TDRVMT SFHK+GD FFPG
Sbjct: 61  GFCYINDIVLAILELLKYHARVLYIDIDIHHGDGVEEAFYCTDRVMTCSFHKYGD-FFPG 119

Query: 205 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 264
           TG+V ++G ++GK+Y++N PLK+G++D S+ ++FK +I K+++ Y P A+VLQCGADSL 
Sbjct: 120 TGNVADVGAKKGKYYSVNFPLKEGMEDVSYGQVFKPVIQKIMDVYRPTAVVLQCGADSLT 179

Query: 265 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 324
           GDRLGCFNL+++GH +CVRFVK F +PLLV GGGGYT  NVARCW  ET +LLDT +  +
Sbjct: 180 GDRLGCFNLTLEGHGDCVRFVKGFGVPLLVLGGGGYTIRNVARCWAYETSVLLDTPVGED 239

Query: 325 IPENEYIKYFAPECSLRI 342
           IP N+Y +Y++P+  L +
Sbjct: 240 IPYNDYFEYYSPDFKLHL 257


>gi|353240871|emb|CCA72719.1| related to histone deacetylase [Piriformospora indica DSM 11827]
          Length = 677

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 174/321 (54%), Positives = 226/321 (70%), Gaps = 5/321 (1%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKPHR+ MTH LV +YDL  K+E+ RPH A P ++ +FH+ +Y+ FL R+TP+T     +
Sbjct: 1   MKPHRIKMTHTLVAAYDLLPKLEVLRPHAATPEQMTRFHTDEYIHFLKRVTPETAGELSE 60

Query: 86  ELTKY--NLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
             T+Y  N G D P +E  FEFC I AGG+I  A+RL+    DIA+NWAGGLHHAKK  A
Sbjct: 61  NGTRYLTNFGYDNPPYEGAFEFCAISAGGSISGAKRLSEGATDIAVNWAGGLHHAKKGGA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCYIND+VLGILELL+   RVLY+DID HHGD VEEAFY +DRV+T S HKFGD FFP
Sbjct: 121 SGFCYINDIVLGILELLRTFPRVLYVDIDCHHGDAVEEAFYTSDRVLTCSLHKFGD-FFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTG   + G  +G  Y+INVP + G+ D +F  ++  ++ K++  + P A+VLQCGADSL
Sbjct: 180 GTGLPDDRGVGKGFRYSINVPFRSGLTDENFASVYVPLMDKILARFRPSAVVLQCGADSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL--DTEL 321
           AGDRLG +NLS+ GHA+CVR+ +   +PL+V GGGGYT  NVAR W  ET  +L  + +L
Sbjct: 240 AGDRLGQYNLSMQGHADCVRYFRDKGIPLMVLGGGGYTIRNVARTWAYETACVLGCEKDL 299

Query: 322 PNEIPENEYIKYFAPECSLRI 342
              +P N+Y  YF PE  + +
Sbjct: 300 DVNLPYNQYFDYFGPEYKMEV 320


>gi|145548860|ref|XP_001460110.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427938|emb|CAK92713.1| unnamed protein product [Paramecium tetraurelia]
          Length = 481

 Score =  364 bits (935), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 178/387 (45%), Positives = 255/387 (65%), Gaps = 45/387 (11%)

Query: 2   RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
            +  +++YFY   +G  ++G  HPMKP R+ M H+L+++Y L++ +++Y   +A   E+ 
Sbjct: 4   ETNKRVAYFYHPQIGRYHYGKEHPMKPKRIAMAHNLIVNYGLYRNLDVYMNRQASLKEME 63

Query: 62  QFHSADYVEFLHRIT----------------PD----TQHLFRQ-ELTKYNL-------- 92
           +FH  +Y+++L + T                P+    T H++ + +L  YN         
Sbjct: 64  KFHEPEYLQYLSQFTSVRSQIVNEYQHYNQQPNITHFTSHIYNEFDLLDYNTPHTHEPIE 123

Query: 93  ---------------GEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHH 137
                            D P F  L++FCQ+ AGG+IDAA  L +Q  +IAIN++GGLHH
Sbjct: 124 TNNNYPQPNSFRVGDSTDNPSFPGLYDFCQLSAGGSIDAAHVLISQDAEIAINYSGGLHH 183

Query: 138 AKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF 197
           AKK EASGFCY+ND+V+ ILELL+ H RVLY+DIDVHHGDGVEEAF  T+RVMT SFH++
Sbjct: 184 AKKREASGFCYVNDIVIAILELLRVHQRVLYVDIDVHHGDGVEEAFLLTNRVMTCSFHQY 243

Query: 198 GDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQ 257
           GD FFPG+GD+   GE  G+++A+N+PLK G++D +FT +F+ II++V++ Y P A+VLQ
Sbjct: 244 GDDFFPGSGDIDSYGEGLGRYHALNIPLKIGMNDETFTEIFQKIITQVMDIYRPEAVVLQ 303

Query: 258 CGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL 317
           CGADSL  DRLG +NLS  GH  CV F+ K+N+P+LV GGGGYT +NVARCW  ETG+ L
Sbjct: 304 CGADSLCHDRLGGYNLSTKGHGACVEFMIKYNVPILVLGGGGYTIQNVARCWAYETGLCL 363

Query: 318 DTELPNEIPENE-YIKYFAPECSLRIP 343
           + ++   IP +E Y +Y+AP+  L  P
Sbjct: 364 NKKIDAPIPTSEIYYEYYAPDYKLHFP 390


>gi|2995806|gb|AAC08351.1| histone deacetylase 3 [Homo sapiens]
          Length = 259

 Score =  363 bits (931), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 165/244 (67%), Positives = 200/244 (81%)

Query: 97  PVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI 156
           PVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+ND+V+GI
Sbjct: 1   PVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI 60

Query: 157 LELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREG 216
           LELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ E+G   G
Sbjct: 61  LELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 120

Query: 217 KFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSID 276
           ++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGADSL  DRLGCFNLSI 
Sbjct: 121 RYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 180

Query: 277 GHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAP 336
           GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +EY +YFAP
Sbjct: 181 GHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAP 240

Query: 337 ECSL 340
           + +L
Sbjct: 241 DFTL 244


>gi|154301161|ref|XP_001550994.1| hypothetical protein BC1G_10553 [Botryotinia fuckeliana B05.10]
 gi|347840373|emb|CCD54945.1| similar to histone deacetylase [Botryotinia fuckeliana]
          Length = 477

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 176/328 (53%), Positives = 229/328 (69%), Gaps = 12/328 (3%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  +  +   +FGP HPMKP RL ++  L+++Y +H  M+ Y    A   EL  FH+ 
Sbjct: 44  VSFHMNPMIEKHHFGPKHPMKPWRLTLSKGLIMAYGMHVAMDTYVSRAATQDELEDFHTH 103

Query: 67  DYVEFLH--RITPDTQHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           DY+E+L   ++ P  + +     T YNLG  DCPVF+ LF +C +Y+G +IDAAR L+N 
Sbjct: 104 DYLEYLKSAKVGPPDERI----ETPYNLGSFDCPVFDGLFNYCSMYSGASIDAARNLSNG 159

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCY+ND+VL IL+LL+   RVLYIDIDVHHGDGVEEAF
Sbjct: 160 TSDIAINWSGGLHHAKKTEASGFCYVNDIVLAILQLLRKVPRVLYIDIDVHHGDGVEEAF 219

Query: 184 YFTDRVMTVSFHKFGDL-FFPGTGDVKEIGER----EGKFYAINVPLKDGIDDTSFTRLF 238
           + T RVMTVSFHK+  + FFPGTG + + G +    +G  +A+NVPL DGIDD  + R+F
Sbjct: 220 WSTGRVMTVSFHKWDPVNFFPGTGALDDTGPKNENNQGAHHAVNVPLNDGIDDEQYIRVF 279

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           K +I K VE + P AIVLQCGADSLAGDR+G FN+ + GH  CV  VK + +PL++ GGG
Sbjct: 280 KQVIDKCVEKFRPSAIVLQCGADSLAGDRIGTFNVLVQGHGACVEHVKGYGIPLMLVGGG 339

Query: 299 GYTKENVARCWTVETGILLDTELPNEIP 326
           GYT  NVAR WT ET I +  +L  E+P
Sbjct: 340 GYTPRNVARAWTNETSIAIGAKLNEELP 367


>gi|126697466|gb|ABO26690.1| histone deacetylase 2 [Haliotis discus discus]
          Length = 258

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 159/253 (62%), Positives = 207/253 (81%), Gaps = 1/253 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +F
Sbjct: 7   KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATAEEMTKF 66

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DY++FL  I PD    + +++ ++N+GEDCPVF+ ++EFCQ+  GG++  A +LN Q
Sbjct: 67  HSDDYIKFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGMYEFCQLSTGGSVAGAVKLNKQ 126

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLY+DID+HHGDGVEEAF
Sbjct: 127 AADIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAF 186

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
           Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I 
Sbjct: 187 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFKPVIM 245

Query: 244 KVVETYAPGAIVL 256
           KV+E Y P AIVL
Sbjct: 246 KVMEMYQPSAIVL 258


>gi|344249727|gb|EGW05831.1| Histone deacetylase 1 [Cricetulus griseus]
          Length = 250

 Score =  362 bits (928), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 161/251 (64%), Positives = 206/251 (82%), Gaps = 1/251 (0%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + ++HS DY++FLH I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +
Sbjct: 1   MTKYHSDDYIKFLHSICPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 60

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LN Q  DIA+NWAGGLHHAKK EASGFCYIND++L ILELLKYH RVLY DID+HHG GV
Sbjct: 61  LNKQQTDIAVNWAGGLHHAKKSEASGFCYINDIILAILELLKYHQRVLYFDIDIHHGHGV 120

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TD+VMTVSFHK+G+ +FPGTGD+ +IG  +GK+YA+N P  DGIDD S+  +FK
Sbjct: 121 EEAFYTTDQVMTVSFHKYGE-YFPGTGDLLDIGAGKGKYYAVNYPPHDGIDDDSYEAIFK 179

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            ++ KV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGG
Sbjct: 180 PVMFKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGG 239

Query: 300 YTKENVARCWT 310
           YT  NVA+CWT
Sbjct: 240 YTIHNVAQCWT 250


>gi|241626601|ref|XP_002407932.1| histone deacetylase 1, 2 ,3, putative [Ixodes scapularis]
 gi|215501103|gb|EEC10597.1| histone deacetylase 1, 2 ,3, putative [Ixodes scapularis]
          Length = 484

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 173/336 (51%), Positives = 236/336 (70%), Gaps = 28/336 (8%)

Query: 13  GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFL 72
           GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS DY+ FL
Sbjct: 8   GDIGNYYYGQGHPMKPHRMRMTHNLILNYGLYRKMEIYRPHKATQEEMTKYHSDDYIRFL 67

Query: 73  HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWA 132
             I PD    + +++ ++N+GEDCPVF+ L+EFCQ+  GG++   R L            
Sbjct: 68  RSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSTGGSVVWKRLLG----------- 116

Query: 133 GGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
                           + +L++      +YH RVLYID+D+HHGDGVEEAFY TDRVMT 
Sbjct: 117 ----------------VAELMMRACAWDRYHQRVLYIDVDIHHGDGVEEAFYTTDRVMTC 160

Query: 193 SFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPG 252
           SFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +F+ +ISKV+E Y P 
Sbjct: 161 SFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFQPLISKVMEMYQPS 219

Query: 253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
           A+VLQCGADSL+GDRLGCFNL++ GH +C  FV+K+NLPLL  GGGGYT  NVARCWT E
Sbjct: 220 AVVLQCGADSLSGDRLGCFNLTLKGHGKCAEFVRKYNLPLLQLGGGGYTIRNVARCWTYE 279

Query: 313 TGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
           T + L  ++ NE+P N+Y +YF P+  L I   ++ 
Sbjct: 280 TAVALGVDIANELPYNDYFEYFGPDFKLHISPSNMA 315


>gi|339233494|ref|XP_003381864.1| histone deacetylase 3 [Trichinella spiralis]
 gi|316979274|gb|EFV62082.1| histone deacetylase 3 [Trichinella spiralis]
          Length = 409

 Score =  361 bits (926), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 176/339 (51%), Positives = 231/339 (68%), Gaps = 1/339 (0%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + +++YF    VG  ++GP HPMKP R+ +T+ LV  Y L K M+ Y    A    L +F
Sbjct: 6   RKRVAYFISPYVGDHHYGPGHPMKPQRVAVTNSLVYQYGLTKYMDTYMAMPASDENLKEF 65

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           H+  YV+FL ++     H   QE+ +  L  DCP F  L+++C  YAG ++ AA  LN+ 
Sbjct: 66  HAPAYVDFLKQLNIHNFHHQNQEIVRSYLDTDCPFFHGLYDYCASYAGASLAAASHLNHG 125

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAK  +ASGFCYIND+VL ILELLKY+ RVLY+DIDVHHGDGV+EAF
Sbjct: 126 KADIAINWSGGLHHAKMSKASGFCYINDIVLAILELLKYYPRVLYVDIDVHHGDGVQEAF 185

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             +DRV+T S H+F + FFPGTG   EIG   GK++A+N+PLK+G    +F +  K ++ 
Sbjct: 186 IQSDRVLTFSSHQFSEGFFPGTGLPDEIGIGPGKYFAVNIPLKEGATLATFEQAVKPLLR 245

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             VE++ P  IVLQCGADSLA DRLG F+L I+ H  CV FV+ FNLP+LV GGGGYT +
Sbjct: 246 LAVESFLPSVIVLQCGADSLACDRLGHFSLGIEDHGVCVSFVRDFNLPMLVVGGGGYTLK 305

Query: 304 NVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLR 341
           NVARCW  ET +L+  ++PN IP   EY + F P+  LR
Sbjct: 306 NVARCWAYETSLLVRKDVPNHIPLTCEYREMFKPKYLLR 344


>gi|403373368|gb|EJY86603.1| Histone deacetylase [Oxytricha trifallax]
          Length = 390

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 162/320 (50%), Positives = 224/320 (70%), Gaps = 3/320 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYR--PHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
           MKP R+ MT  ++ SY + K+M+     P     V+   +HS DYV+ L  +T D + L+
Sbjct: 1   MKPFRVRMTDEMIRSYGMDKQMKRMEVEPEFIENVDFTVYHSDDYVDVLKNLTLDNRDLY 60

Query: 84  RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 143
             ++ ++N GEDCP+F+ ++++CQIY  G++ AA  +     DI INWAGGLHHAKK EA
Sbjct: 61  ADQINRFNFGEDCPIFDGMYDYCQIYTAGSLRAASWVAQGNSDIGINWAGGLHHAKKMEA 120

Query: 144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
           SGFCY+ND V+ ILE LK + RVLYIDID HHGDGVEEAF+ T+RVMT SFHKFGD +FP
Sbjct: 121 SGFCYVNDCVMAILEFLKTYERVLYIDIDCHHGDGVEEAFFTTNRVMTASFHKFGD-YFP 179

Query: 204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
           GTG + +IG   GK Y++N PL +G+DD +F + FK ++ ++++ + P AIV QCG DSL
Sbjct: 180 GTGAIDDIGAGPGKHYSMNFPLSEGVDDFTFEQAFKPVMKEIMDRFKPQAIVHQCGTDSL 239

Query: 264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 323
           +GDRLG FNLS+ GH   V +++ F +P+++ GGGGY+  NVARCWT ET + L  E+ N
Sbjct: 240 SGDRLGLFNLSVKGHGATVEYMRSFGIPMILVGGGGYSLRNVARCWTYETSVALGIEIDN 299

Query: 324 EIPENEYIKYFAPECSLRIP 343
            IP +EY  YF P+  + +P
Sbjct: 300 NIPHHEYSSYFQPDSKIVVP 319


>gi|146177173|ref|XP_001470889.1| histone deacetylase 1, 2 ,3 [Tetrahymena thermophila]
 gi|146144634|gb|EDK31538.1| histone deacetylase 1, 2 ,3 [Tetrahymena thermophila SB210]
          Length = 473

 Score =  358 bits (919), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 175/365 (47%), Positives = 241/365 (66%), Gaps = 22/365 (6%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M +K K++YFY+ ++G+  +G  H M P R+ MTH L++ Y ++K +++Y   +A   E+
Sbjct: 1   METKKKVAYFYNNEIGNYNYGKLHLMNPKRISMTHSLIVGYGVYKDLDVYTTREATKEEI 60

Query: 61  AQFHSADYVEFLHRITPDTQHLF--------------------RQELTKYNLGEDCPVFE 100
            QFH  DYVE+L      ++  F                    +++    ++  DCP F+
Sbjct: 61  MQFHDQDYVEYLSNYVSSSKIDFLKKNGCSIPLIDEDAKNDSDKKKQYGIDVQADCPGFD 120

Query: 101 NLFEFCQIY-AGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILEL 159
            L+ F Q+   GG+IDAA  + N   DIAINW GGLHHAKK EA GFCY+ND+V+ ILEL
Sbjct: 121 GLYTFSQLSTGGGSIDAAHLIINNAADIAINWGGGLHHAKKGEAYGFCYVNDIVICILEL 180

Query: 160 LKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFY 219
           LK   RVLYIDIDVHHGDGVEEAFY T+RVMTVSFH+FG+ FFPGTG +   GE  GK Y
Sbjct: 181 LKVFPRVLYIDIDVHHGDGVEEAFYTTNRVMTVSFHEFGEDFFPGTGGLNSNGEGLGKNY 240

Query: 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA 279
           A+NVPL+ G+DD S+ +LFK +++KV+E Y P  +V Q GADSLA D++G FNLSI GH 
Sbjct: 241 AVNVPLRPGMDDESYVQLFKNVMNKVMEVYRPDVVVFQTGADSLANDKIGHFNLSIKGHG 300

Query: 280 ECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPEC 338
           +C+ ++  FN+PL+V GGGGYT +NV+RCW  ETG+L+   L   IP ++ +   +  + 
Sbjct: 301 QCLTYMMGFNVPLVVLGGGGYTIQNVSRCWAFETGLLVKKSLNGPIPVDDPFFHLYEKQN 360

Query: 339 SLRIP 343
            L +P
Sbjct: 361 VLHVP 365


>gi|299754213|ref|XP_002911959.1| histone deacetylase-3 [Coprinopsis cinerea okayama7#130]
 gi|298410653|gb|EFI28465.1| histone deacetylase-3 [Coprinopsis cinerea okayama7#130]
          Length = 504

 Score =  356 bits (913), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 170/324 (52%), Positives = 221/324 (68%), Gaps = 8/324 (2%)

Query: 39  LSYDLHKKM-EIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCP 97
           + Y L K++  IY P  A   EL  +H  DY+EFL R+TP  Q   R  +  +N  EDCP
Sbjct: 1   MGYGLDKQIHNIYDPRPATQEELENYHDHDYIEFLSRVTPQKQDEMRSMIEAFNCVEDCP 60

Query: 98  VFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGIL 157
           +F +L++FC++YAG ++  AR+L     DIAINW+GGLHHAK+ EASGFCY+ND+VL IL
Sbjct: 61  IFADLYDFCKMYAGASLAGARKLCAGTTDIAINWSGGLHHAKRGEASGFCYVNDIVLAIL 120

Query: 158 ELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGK 217
           E+L+Y  RVLYIDID+HHGDGVE AFY ++RVMTVSFHK+   FFPGTG + + G   GK
Sbjct: 121 EMLRYFPRVLYIDIDIHHGDGVEMAFYHSNRVMTVSFHKYTGDFFPGTGKLDDNGTGLGK 180

Query: 218 FYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG 277
            + +NVPL DGIDD  +  +FK +I   V  + P AIVLQCGADSL  DRLG FNLSI G
Sbjct: 181 NFCLNVPLLDGIDDDMYLTIFKAVIGDTVNAFRPSAIVLQCGADSLGCDRLGAFNLSIAG 240

Query: 278 HAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFA-- 335
           H ECV FV++F +PLLV GGGGYT +NV+RCW  ET +L+  ++PNE+P   Y  +F   
Sbjct: 241 HGECVDFVRRFGVPLLVLGGGGYTIKNVSRCWAYETSVLVGVKVPNELPATVYDSFFEDS 300

Query: 336 -----PECSLRIPNGHIVCSFKEI 354
                P  + ++ N +   S + I
Sbjct: 301 EWKLHPPLTGKVDNQNSPASLQRI 324


>gi|392341722|ref|XP_003754409.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 1-like [Rattus
           norvegicus]
 gi|392349708|ref|XP_003750449.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 1-like [Rattus
           norvegicus]
          Length = 493

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/339 (51%), Positives = 236/339 (69%), Gaps = 22/339 (6%)

Query: 4   KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
           + K  Y YD DVG+   G  HP+KPH + +TH+L+LSY L++KM++Y PHKA   E+ ++
Sbjct: 52  QKKFCYGYDWDVGNYNSGQGHPVKPHSMHVTHNLLLSYGLYRKMDVYCPHKANAKEMTKY 111

Query: 64  HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           HS DYV+FL  I P+    +  +L  +N+GEDCPVF+ L EFCQ++ GG++ +A +LN Q
Sbjct: 112 HSDDYVKFLGSICPNNISEYSXQLQXFNVGEDCPVFDGLSEFCQLFTGGSVASAVKLNKQ 171

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIA+NWAG LH AKK EASGFC I+D+VL ILELLKYH  VL +DIDVHHG GVEEAF
Sbjct: 172 QTDIAVNWAGRLHRAKKSEASGFCCIHDIVLAILELLKYHQSVLCMDIDVHHGVGVEEAF 231

Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             TD+V+TVS H + + +FPGTG+++++G       AIN PL+DG+DD S   +FK ++S
Sbjct: 232 CTTDQVITVSAHNYRE-YFPGTGNLRDMG------LAINYPLRDGVDDESHDAIFKPVMS 284

Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
           KV+E + P  +VLQCG+DSLAG RLGC +L+I  H +CV FVK FNLP+L          
Sbjct: 285 KVMEMFXPSTVVLQCGSDSLAGGRLGCSSLTIKAHTKCVEFVKSFNLPMLT--------- 335

Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
                   ET ++LDTE+PNE+P ++  +YF P+  L I
Sbjct: 336 ------PYETAVVLDTEIPNELPYDDNFEYFGPDFKLHI 368


>gi|409050643|gb|EKM60120.1| hypothetical protein PHACADRAFT_251017 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 499

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/286 (58%), Positives = 215/286 (75%), Gaps = 5/286 (1%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
           + +FH+ +YV FL R++P+T        T++ +G+D P +E LFEFC + AGG+I+AA R
Sbjct: 1   MTRFHTDEYVHFLSRVSPETTEDLTYHGTRFLVGDDNPAWEGLFEFCSLSAGGSIEAATR 60

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           L +   DIAINWAGGLHHAKK EASGFCY+ND+VLGILELL+ H RVLYIDID HHGDGV
Sbjct: 61  LTSGAVDIAINWAGGLHHAKKREASGFCYVNDIVLGILELLRSHPRVLYIDIDCHHGDGV 120

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           EEAFY TDRVMT SFHKFG+ +FPGTG  ++ G  +GK YAIN+PLKDGI D ++  +F+
Sbjct: 121 EEAFYTTDRVMTCSFHKFGE-YFPGTGTQEDRGRNKGKGYAINIPLKDGITDEAYKSVFE 179

Query: 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299
            I++K+ E Y P AIVLQCGADSLAGD+LGCFN+++ GHA CV+FV+K  +P ++ GGGG
Sbjct: 180 PIVTKINEVYRPSAIVLQCGADSLAGDKLGCFNITMQGHANCVQFVRKLGIPFMLLGGGG 239

Query: 300 YTKENVARCWTVETGILL---DTELPNEIPENEYIKYFAPECSLRI 342
           YT +NVAR W  ET   L   D+  PN +P NEY ++F P   L +
Sbjct: 240 YTVKNVARTWAFETACALGIEDSIDPN-MPWNEYFEWFGPRYRLEV 284


>gi|367018956|ref|XP_003658763.1| histone deacetylase phd1-like protein [Myceliophthora thermophila
           ATCC 42464]
 gi|347006030|gb|AEO53518.1| histone deacetylase phd1-like protein [Myceliophthora thermophila
           ATCC 42464]
          Length = 496

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/334 (53%), Positives = 227/334 (67%), Gaps = 11/334 (3%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           ++SY    ++   +FG  HPMKP RL +T  LV SY +   M+ Y   +A   EL  FHS
Sbjct: 65  RVSYHATPEMEKHHFGQTHPMKPWRLTLTKSLVTSYGMPFAMDNYVTREATYEELNAFHS 124

Query: 66  ADYVEFLHRITPDTQHL---FRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +DY+++L   TP+ Q        +  KYNLG  DCP+F  L+ +C + AG ++DAAR++ 
Sbjct: 125 SDYLDYLSTATPEDQPQDIDNSDKEVKYNLGGSDCPLFHGLYNYCSMSAGCSLDAARKIT 184

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N   DIAI W GGLHHAKK EASGFCYIND+VL IL+LL+ + RVLYIDIDVHHGDGVEE
Sbjct: 185 NNQSDIAIAWGGGLHHAKKYEASGFCYINDIVLAILQLLRIYPRVLYIDIDVHHGDGVEE 244

Query: 182 AFYFTDRVMTVSFHKF-GDLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AFY TDRVMTVSFHK+  + FFPGTG +++ G +     G  +AINVPL+DGI D  +  
Sbjct: 245 AFYSTDRVMTVSFHKYHPETFFPGTGALEDNGPKSEHNPGAHHAINVPLQDGITDEQYEN 304

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF++II  + E Y P AI LQCGADSLAGDRLG FNL + GH  CVR+ K   LP+++ G
Sbjct: 305 LFQSIIGPINERYRPSAIALQCGADSLAGDRLGRFNLRVQGHGACVRYCKSLGLPMIMFG 364

Query: 297 GGGYTKENVARCWTVETGILL--DTELPNEIPEN 328
           GGGYT  NVAR W  ET I +  DT +P  IPE+
Sbjct: 365 GGGYTPRNVARAWAYETSIAIGADTRIPETIPEH 398


>gi|358336402|dbj|GAA30935.2| histone deacetylase 3 [Clonorchis sinensis]
          Length = 373

 Score =  354 bits (908), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 176/298 (59%), Positives = 223/298 (74%), Gaps = 17/298 (5%)

Query: 60  LAQFHSADYVEFLHRITPDTQHLF-RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAAR 118
           +  FHS DY EFL  +TP   H F +++L  YN+GEDCP+F+ +++FC IY G ++ AA+
Sbjct: 1   MITFHSQDYAEFLRDVTPHNMHTFPKEKLLTYNIGEDCPIFDGIYQFCSIYTGASLQAAK 60

Query: 119 RLNNQLCDIAINWAGGLHHAKKCE--------------ASGFCYINDLVLGILELLKYHA 164
            LNN++ DIAINW+GGLHHAKK E              ASGFCYIND+V+ ILELLKYH 
Sbjct: 61  YLNNEVADIAINWSGGLHHAKKFEVRSAFHPTKLRYFQASGFCYINDIVIAILELLKYHP 120

Query: 165 RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVP 224
           RVLYIDIDVHHGDGV+EAFY TDRVMTVSFH++G++FFPGTGD+ E+G + GK+Y+INVP
Sbjct: 121 RVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHRYGNMFFPGTGDMYEVGAKAGKYYSINVP 180

Query: 225 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 284
           LK+GIDD  +  +F+ +++ VV  Y P A+VLQCGADSL  DRLG FNLSI GH  CV+ 
Sbjct: 181 LKEGIDDDMYFNIFRCVVNDVVTYYRPTAVVLQCGADSLGCDRLGVFNLSIRGHGRCVKM 240

Query: 285 VKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE--LPNEIPENEYIKYFAPECSL 340
           VK   LPLLV GGGGYT  NVARCW  ET +LLD E  + N++P + YI++F P+ +L
Sbjct: 241 VKALGLPLLVLGGGGYTVRNVARCWAYETAVLLDQEDNISNDLPYSPYIEFFHPDYTL 298


>gi|449549308|gb|EMD40273.1| hypothetical protein CERSUDRAFT_110877 [Ceriporiopsis subvermispora
           B]
          Length = 532

 Score =  353 bits (907), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 178/319 (55%), Positives = 232/319 (72%), Gaps = 3/319 (0%)

Query: 26  MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
           MKP R+ +TH LV +Y++  KM++ R  +A    + +FH+ +YV FL R+TP+T      
Sbjct: 1   MKPQRMRLTHELVSAYNMLDKMDVIRAKRASAEAMTRFHTDEYVHFLSRVTPETAEELTY 60

Query: 86  ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             T++ +GED P FE +FEFC I AGG++ AA R+++   DIAINWAGGLHHAKK EASG
Sbjct: 61  NGTRFLVGEDNPAFEGVFEFCTISAGGSLAAAHRISDGAADIAINWAGGLHHAKKREASG 120

Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
           FCYIND+VL ILELL+   RVLY+DID HHGDGVEEAFY TDRVMT SFHKFG+ +FPGT
Sbjct: 121 FCYINDIVLAILELLRVFPRVLYVDIDCHHGDGVEEAFYTTDRVMTCSFHKFGE-YFPGT 179

Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
           G +++ G   G+ YAINVP KDGI D SF  +F+ +I K++E Y P AIVLQCGADSLAG
Sbjct: 180 GTLEDRGRGRGRGYAINVPFKDGITDESFKSVFEPVIDKILEVYQPSAIVLQCGADSLAG 239

Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL--DTELPN 323
           D+LGCFN+++ GHA CV++++   LPL++ GGGGYT +NVAR W  ET   L  + E+  
Sbjct: 240 DKLGCFNITMQGHASCVQYMRGRGLPLILLGGGGYTVKNVARTWAYETACALGIEKEIDL 299

Query: 324 EIPENEYIKYFAPECSLRI 342
            +P NEY ++F P   L +
Sbjct: 300 NLPWNEYFEWFGPRYRLEV 318


>gi|342884535|gb|EGU84745.1| hypothetical protein FOXB_04756 [Fusarium oxysporum Fo5176]
          Length = 499

 Score =  353 bits (906), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 177/342 (51%), Positives = 236/342 (69%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA+FHS
Sbjct: 68  NVSFHCNPDIEKHHFGVTHPMKPWRLTLSKSLIYSYGMSFAMDNYISRAATYEELAEFHS 127

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +DY++FL  + P+   + L  Q +  K+NLG  DCP+F+ LF +C + AGG++DAAR++ 
Sbjct: 128 SDYLDFLGTVLPEPVPRDLENQGVDLKFNLGGSDCPLFDGLFNYCSLSAGGSLDAARKIC 187

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           ++  DIAI+W GGLHHAK+ EASGFCYIND+V+ ILELL+Y+ RVLYIDIDVHHGDGVEE
Sbjct: 188 SKQSDIAISWGGGLHHAKRSEASGFCYINDIVIAILELLRYYPRVLYIDIDVHHGDGVEE 247

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+  + FFPGTG + + G +     G  +A NVPL DGI D  +  
Sbjct: 248 AFFSTDRVMTVSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAFNVPLNDGITDEQYDH 307

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF T+I K+VE + PGAI LQCGADSLAGDRLG FNL + GH  CV+F K+  +P+++ G
Sbjct: 308 LFNTVIGKIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVKFCKEMGIPMILFG 367

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I ++ +      LP   P  ++ +
Sbjct: 368 GGGYTPRNVARAWTYETSIAINAQDKINPILPEHAPWRDHFR 409


>gi|156057015|ref|XP_001594431.1| hypothetical protein SS1G_04238 [Sclerotinia sclerotiorum 1980]
 gi|154702024|gb|EDO01763.1| hypothetical protein SS1G_04238 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 472

 Score =  353 bits (906), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 175/329 (53%), Positives = 224/329 (68%), Gaps = 14/329 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  +  V   +FG +HPMKP RL +   L+++Y +H  M+ Y   KA   EL  FH+ 
Sbjct: 44  VSFHINPMVEKHHFGRSHPMKPWRLTLAKGLIMAYGMHVAMDTYVSRKATQAELEDFHTH 103

Query: 67  DYVEFLHRIT---PDTQHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +Y+E++       PD       E   YNLG  DCPVF+ LF +C +Y+G +IDAAR L +
Sbjct: 104 EYLEYIKTAKVGLPDDD-----ENKPYNLGSYDCPVFDGLFNYCSMYSGASIDAARSLCD 158

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
              DIAINW+GGLHHAKK EASGFCY+ND+VL IL+LL+   RVLYIDIDVHHGDGVEEA
Sbjct: 159 GTSDIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRKVPRVLYIDIDVHHGDGVEEA 218

Query: 183 FYFTDRVMTVSFHKFGDL-FFPGTGDVKEIGER----EGKFYAINVPLKDGIDDTSFTRL 237
           F+ T RVMTVSFHK+    FFPG+G + + G +    +G  +A+NVPL DGIDD  + R+
Sbjct: 219 FWSTGRVMTVSFHKYDPQNFFPGSGGLDDTGPKNENNQGAHHAVNVPLNDGIDDDQYLRV 278

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           FK +ISK  E + P AIVLQCGADSLAGDR+G FN+ + GH  CV +VK   +PL++ GG
Sbjct: 279 FKQVISKCTEKFRPSAIVLQCGADSLAGDRIGTFNILVQGHGACVEYVKSLGIPLMLVGG 338

Query: 298 GGYTKENVARCWTVETGILLDTELPNEIP 326
           GGYT  NVAR WT ET I +  +L  EIP
Sbjct: 339 GGYTPRNVARAWTNETSIAIGAKLHEEIP 367


>gi|346320646|gb|EGX90246.1| histone deacetylase phd1 [Cordyceps militaris CM01]
          Length = 542

 Score =  353 bits (906), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 232/342 (67%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA FHS
Sbjct: 111 NVSFHCNPDMEKHHFGMTHPMKPWRLTLSKSLIYSYGMSFAMDNYVSRAATYEELATFHS 170

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY++FL  + P+   + L  Q    K+NLG  DCP+F+ L+++C + AGG +D AR+L 
Sbjct: 171 TDYLDFLGTVLPEPVPRDLENQNPDLKFNLGGSDCPLFDGLYDYCSMSAGGALDGARKLC 230

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           ++  DIAI W GGLHHAKK EASGFCYIND+V+ IL+LL+Y+ RVLYIDIDVHHGDGVEE
Sbjct: 231 SKQSDIAIAWGGGLHHAKKAEASGFCYINDIVIAILQLLRYYPRVLYIDIDVHHGDGVEE 290

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+  + FFPGTG + + G +     G  +A+NVPL DGI D  +  
Sbjct: 291 AFFSTDRVMTVSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAVNVPLNDGITDEQYEW 350

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF +II ++VE + PGAI LQCGADSLAGDRLG FNL + GH  CV F KK+NLPL++ G
Sbjct: 351 LFNSIIGRIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVEFCKKYNLPLILFG 410

Query: 297 GGGYTKENVARCWTVETGIL------LDTELPNEIPENEYIK 332
           GGGYT  NVAR W  ET I       +++ LP  +P  E  +
Sbjct: 411 GGGYTPRNVARAWAYETSIAIGCDDKINSTLPQHVPWREQFR 452


>gi|339253806|ref|XP_003372126.1| histone deacetylase 1 [Trichinella spiralis]
 gi|316967514|gb|EFV51929.1| histone deacetylase 1 [Trichinella spiralis]
          Length = 584

 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 171/325 (52%), Positives = 225/325 (69%), Gaps = 10/325 (3%)

Query: 21  GP--NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD 78
           GP   H MKP R  MT  LV SY L + M++ +   A   +L  FH+ +Y+E +   T  
Sbjct: 127 GPLLTHLMKPFRAAMTDSLVQSYGLTQCMKVMKTEWASEDDLKVFHTNEYIEAIKVAT-- 184

Query: 79  TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHA 138
                + +  K     DCP F  + E+C+  AG ++ +AR +N +  DI INW GG+HHA
Sbjct: 185 -----KTKSKKRGGDADCPEFFGVLEYCRAVAGSSLSSARVMNMRTSDIIINWNGGMHHA 239

Query: 139 KKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
           K  EASGFC+IND+VL ILELLK + RVLY+DID HHGDGVEEAFY T+RVMTVSFHK+G
Sbjct: 240 KSYEASGFCFINDIVLAILELLKVYDRVLYVDIDCHHGDGVEEAFYTTNRVMTVSFHKYG 299

Query: 199 DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 258
           D FFPG+G +++IG  EG+ YA+NVPL  GI D ++  LF+ II+K+VE + P AIV+QC
Sbjct: 300 D-FFPGSGRLEDIGLDEGEKYAVNVPLNSGIGDANYVALFRMIITKIVEHFRPSAIVMQC 358

Query: 259 GADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLD 318
           GADSLA DRLGCFNLS+ GH ECV+FV+   +PL++ GGGGY+  NVARCWT ET I LD
Sbjct: 359 GADSLAHDRLGCFNLSVSGHGECVKFVRSLQIPLMLLGGGGYSLHNVARCWTYETSIALD 418

Query: 319 TELPNEIPENEYIKYFAPECSLRIP 343
             + N++P +EY  +++P   L +P
Sbjct: 419 VPINNDLPFHEYYNFYSPSFKLHLP 443


>gi|145543266|ref|XP_001457319.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425135|emb|CAK89922.1| unnamed protein product [Paramecium tetraurelia]
          Length = 444

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 169/378 (44%), Positives = 243/378 (64%), Gaps = 37/378 (9%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYD-LHKKMEIYRPHKAYPVELA 61
           S  +++YFY+  +G   +G  HPMKP R+ M H+L+++Y  L ++M++Y   +A   E+ 
Sbjct: 8   SSRRVAYFYNRFIGKFQYGKEHPMKPKRIIMAHNLIVNYGYLFRQMDVYLIREAQLQEIG 67

Query: 62  QFHSADYVEFLHR--------------------ITPDT-------------QHLFRQELT 88
           +FH  DY+ +L +                    + P+              Q   + E +
Sbjct: 68  KFHDPDYIIYLSQFMSQNKINFVKEYCSANNESVIPENLLEEFKLIIKWSQQQKVKTENS 127

Query: 89  KYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 146
           ++ +G+  D P F  LF +CQ+ +G +ID A  +     DIAINW+GGLHHAKK EASGF
Sbjct: 128 EFKVGDSPDNPTFSGLFSYCQLSSGASIDCAHSILTGQADIAINWSGGLHHAKKKEASGF 187

Query: 147 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTG 206
           CYIND+VL ILELL+ + RVLY+DID HHGDGVEEAFY T+RVMT+SFH++GD F+PGTG
Sbjct: 188 CYINDIVLCILELLRVYVRVLYVDIDCHHGDGVEEAFYLTNRVMTLSFHQYGDDFYPGTG 247

Query: 207 DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 266
            +  +G   G++Y++NVP+K G+ D  +  +FK I S+V++ Y P  IV+QCGADSL+ D
Sbjct: 248 QLNSVGVGVGRYYSVNVPMKPGMSDQPYIEMFKKITSRVMQVYRPDCIVMQCGADSLSLD 307

Query: 267 RLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 326
           +LG FNLSI GH  CV ++K F +P+++ GGGGYT +NV+RCW  ETGI L  ++   IP
Sbjct: 308 KLGGFNLSIKGHGACVEYMKSFGIPMILLGGGGYTIQNVSRCWAYETGIALGQQIDQAIP 367

Query: 327 ENE-YIKYFAPECSLRIP 343
            N+ Y  Y++P+  L  P
Sbjct: 368 SNDIYYDYYSPDYLLHFP 385


>gi|302921911|ref|XP_003053357.1| histone deacetylase [Nectria haematococca mpVI 77-13-4]
 gi|256734298|gb|EEU47644.1| histone deacetylase [Nectria haematococca mpVI 77-13-4]
          Length = 497

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 179/334 (53%), Positives = 233/334 (69%), Gaps = 11/334 (3%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           K+S+  + D+ S +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA FHS
Sbjct: 66  KVSFHCNPDIESHHFGVTHPMKPWRLTLSKSLIYSYGMSFAMDNYIARAATYEELADFHS 125

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY++FL  + P+   + L  Q +  K+NLG  DCP+F+ LF +C + AGG++DAAR++ 
Sbjct: 126 TDYLDFLGTVLPEPVPRDLENQAVDLKFNLGGSDCPLFDGLFNYCSLSAGGSLDAARKIC 185

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +   DIAI+W GGLHHAKK EASGFCYIND+VL +L+LL+Y+ RVLYIDIDVHHGDGVEE
Sbjct: 186 SGQSDIAISWGGGLHHAKKSEASGFCYINDIVLAVLQLLRYYPRVLYIDIDVHHGDGVEE 245

Query: 182 AFYFTDRVMTVSFHKFGDL-FFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+    FFPGTG + + G +     G  +A NVPL DGI D  +  
Sbjct: 246 AFFSTDRVMTVSFHKYDPQNFFPGTGALDDNGPKSEHNPGAHHAFNVPLMDGITDEQYDG 305

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF +II K+VE + PGAI LQCGADSLAGDRLG FNL + GH  CV+F K+  +P+++ G
Sbjct: 306 LFNSIIGKIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVKFCKEMRIPMILFG 365

Query: 297 GGGYTKENVARCWTVETGILL--DTELPNEIPEN 328
           GGGYT  NVAR WT ET I    D ++ + +PE+
Sbjct: 366 GGGYTPRNVARAWTYETSIATNCDDKISSILPEH 399


>gi|171696090|ref|XP_001912969.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948287|emb|CAP60451.1| unnamed protein product [Podospora anserina S mat+]
          Length = 500

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 177/333 (53%), Positives = 228/333 (68%), Gaps = 11/333 (3%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY    ++   +FG  HPMKP RL +T  LV +Y +   M+ Y    A   EL  FHS+
Sbjct: 66  VSYHATSEMEKHHFGQTHPMKPWRLTLTKSLVTAYGMPFAMDNYNTRHATYEELNSFHSS 125

Query: 67  DYVEFLHRITPDTQHL---FRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           DY+++L    P+ Q        +  K+NLG  DCP+F  L+++C + AG ++DAAR++ N
Sbjct: 126 DYLDYLATAAPEDQPRDLDNPDKDVKFNLGGSDCPLFHGLYDYCSMSAGTSLDAARKICN 185

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAI W GGLHHAKK EASGFCYIND+VL IL+LL+ + RVLYIDIDVHHGDGVEEA
Sbjct: 186 KQSDIAIAWGGGLHHAKKSEASGFCYINDIVLAILQLLRLYPRVLYIDIDVHHGDGVEEA 245

Query: 183 FYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRL 237
           F+ TDRVMTVSFHK+  ++FFPGTG + + G +     G  +AINVPL DGI D  +  L
Sbjct: 246 FFSTDRVMTVSFHKYQPEVFFPGTGGLNDNGPKSEHNPGAHHAINVPLNDGITDEQYEHL 305

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           FK+II +V  T+ P AI LQCGADSLAGDRLG FNL ++GHA CVRF K   +P+++ GG
Sbjct: 306 FKSIIGQVNTTFRPSAIALQCGADSLAGDRLGRFNLKVEGHAACVRFCKSLGIPMILFGG 365

Query: 298 GGYTKENVARCWTVETGILL--DTELPNEIPEN 328
           GGYT  NVAR W  ET I +  D  +P EIP++
Sbjct: 366 GGYTPRNVARAWAYETSIAIGADQNIPAEIPQH 398


>gi|56754549|gb|AAW25462.1| SJCHGC03853 protein [Schistosoma japonicum]
          Length = 268

 Score =  350 bits (899), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 156/266 (58%), Positives = 207/266 (77%), Gaps = 1/266 (0%)

Query: 1   MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
           M    ++ YFYD D G+ ++GPNHPMKPHRL +TH LV++Y+L   M++Y+P+ A   ++
Sbjct: 1   MGKDRRVVYFYDPDCGNFHYGPNHPMKPHRLTLTHTLVVNYNLTDSMKVYKPYHASMKDM 60

Query: 61  AQFHSADYVEFLHRITPDTQHLF-RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
             FHS +Y+EFL  +TP   H F +++L  YN+GEDCP+F+ ++ F  IY G ++ AA+ 
Sbjct: 61  ISFHSQEYIEFLRDVTPTNVHTFPKEKLLTYNIGEDCPIFDGIYRFSSIYTGASLQAAKY 120

Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
           LNN + DIAINW+GGLHHAKK EASGFCY+ND+V+  LELLKY+ RVLYIDIDVHHGDGV
Sbjct: 121 LNNGVTDIAINWSGGLHHAKKFEASGFCYVNDIVIATLELLKYNPRVLYIDIDVHHGDGV 180

Query: 180 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 239
           +EAFY TDRVMTVSFH++G++FFPGTGD+ E+G + GK+YA+NVPLK+GIDD  +  +F+
Sbjct: 181 QEAFYLTDRVMTVSFHRYGNMFFPGTGDMYEVGAKAGKYYAVNVPLKEGIDDDMYFSVFR 240

Query: 240 TIISKVVETYAPGAIVLQCGADSLAG 265
            +I+ VV  Y P  IVLQCGADSLA 
Sbjct: 241 AVINDVVAFYRPTTIVLQCGADSLAA 266


>gi|340507263|gb|EGR33254.1| hypothetical protein IMG5_057740 [Ichthyophthirius multifiliis]
          Length = 465

 Score =  350 bits (897), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 176/360 (48%), Positives = 242/360 (67%), Gaps = 23/360 (6%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
           +ISYFY+ ++G  Y+  +HPMKP R+ M H L+ ++ L+K +E+Y   +A   E+ +FH 
Sbjct: 12  RISYFYNPEIGKFYYSKDHPMKPKRVAMAHSLIQNFGLYKDLEVYTSREATFEEMLKFHD 71

Query: 66  ADYVEFLHRITPD--TQHL--------------------FRQELTKYNLGEDCPVFENLF 103
            +Y+++L     +  TQ L                     ++++ K     DCP FE L+
Sbjct: 72  VEYLQYLQNYVSNGWTQELKKLKIDPLSDLNGAYHINNPQKKQINKIGDTSDCPGFEGLY 131

Query: 104 EFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 163
            FCQI AGG++D A+ + N L +IAINW GGLHHAKK EASGFCY+ND+VL  LELLKY+
Sbjct: 132 NFCQISAGGSLDCAQMIINNLSEIAINWGGGLHHAKKREASGFCYVNDIVLCALELLKYY 191

Query: 164 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINV 223
            RVLYIDIDVHHGDGVEEAF+ T+RVMTVSFH++G  FFPG+G +  +G+  GKF++INV
Sbjct: 192 ERVLYIDIDVHHGDGVEEAFFLTNRVMTVSFHEYGGGFFPGSGSLNSVGDGLGKFHSINV 251

Query: 224 PLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVR 283
           PLK G++D SF  LFK +I+KV+E Y P  ++LQCGADSLA D+LG FNLS  GH + V 
Sbjct: 252 PLKPGMNDDSFEHLFKDVINKVMEIYRPNVVILQCGADSLAYDKLGHFNLSTRGHGKAVE 311

Query: 284 FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE-YIKYFAPECSLRI 342
            +K + +PL++ GGGGY   NVARCW  ET + +  ++   IP  E + +YF P+  L +
Sbjct: 312 IMKSYGVPLILVGGGGYNVPNVARCWAYETSVCIGKKIDGNIPNTEPFYEYFGPDHRLHV 371


>gi|170070248|ref|XP_001869513.1| histone deacetylase [Culex quinquefasciatus]
 gi|167866142|gb|EDS29525.1| histone deacetylase [Culex quinquefasciatus]
          Length = 275

 Score =  349 bits (896), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 156/248 (62%), Positives = 200/248 (80%), Gaps = 1/248 (0%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
           SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct: 5   SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query: 63  FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           FHS DY+ FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct: 65  FHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
           FY TDRVMTVSFHK+G+ +FPGTGD+++IG   GK+YA+N+PL+DG+DD S+  +F  II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYESIFVPII 243

Query: 243 SKVVETYA 250
           SK V   A
Sbjct: 244 SKAVAAEA 251


>gi|340520312|gb|EGR50548.1| predicted protein [Trichoderma reesei QM6a]
          Length = 496

 Score =  349 bits (896), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 175/342 (51%), Positives = 232/342 (67%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + ++   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA FHS
Sbjct: 65  NVSFHCNPEMEKHHFGMTHPMKPWRLTLSKSLIYSYGMSFAMDNYLTRAATYEELASFHS 124

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY++FL  + P+   + L  Q    K+NLG  DCP+F+ L+++C + AG  +DAAR++ 
Sbjct: 125 TDYLDFLGTVLPEAVPRDLENQNPDLKFNLGGSDCPLFDGLYDYCSMSAGSALDAARKIC 184

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +Q  DIAI W GGLHHAKK EASGFCYIND+V+ ILELL+++ RVLYIDIDVHHGDGVEE
Sbjct: 185 SQQSDIAIAWGGGLHHAKKAEASGFCYINDIVIAILELLRFYPRVLYIDIDVHHGDGVEE 244

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+  + FFPGTG + + G +     G  +A+NVPL+DGI D  +  
Sbjct: 245 AFFSTDRVMTVSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAVNVPLQDGITDEQYDS 304

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF  I+ ++VE + PGAI LQCGADSLAGDRLG FNL + GH  CV F K+ N+P+++ G
Sbjct: 305 LFNNIVGRIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVEFCKRMNIPMILFG 364

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I ++ +      LP   P  E+ +
Sbjct: 365 GGGYTPRNVARAWTYETSIAINCQDKISPILPEHAPWREHFR 406


>gi|116181764|ref|XP_001220731.1| hypothetical protein CHGG_01510 [Chaetomium globosum CBS 148.51]
 gi|88185807|gb|EAQ93275.1| hypothetical protein CHGG_01510 [Chaetomium globosum CBS 148.51]
          Length = 496

 Score =  349 bits (896), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 245/381 (64%), Gaps = 20/381 (5%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +SY    ++   +FG  HPMKP RL +T  LV SY +   M+ Y   +A   EL  FHS+
Sbjct: 66  VSYHATPEMEKHHFGQTHPMKPWRLTLTKSLVTSYGMPFAMDNYLTREATYEELNSFHSS 125

Query: 67  DYVEFLHRITPDTQHLFRQEL---TKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           +Y+++L    P+ Q    +E     K+NLG  DCP+F  L+ +C + AG ++DAAR++ +
Sbjct: 126 EYLDYLATAAPEDQPQDIEEPGKDVKFNLGGSDCPLFHGLYNYCSMSAGCSLDAARKITS 185

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIAI W GGLHHAK+ EASGFCYIND+VL IL+LL+ H RVLYIDIDVHHGDGVEEA
Sbjct: 186 KQSDIAIAWGGGLHHAKRKEASGFCYINDIVLAILQLLRTHPRVLYIDIDVHHGDGVEEA 245

Query: 183 FYFTDRVMTVSFHKF-GDLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRL 237
           F+ TDRVMTVSFHK+  + FFPGTG +++ G +     G  +AINVPL+DGI D  +  L
Sbjct: 246 FFSTDRVMTVSFHKYHPETFFPGTGALEDNGPKSEHNPGAHHAINVPLQDGITDEQYETL 305

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F++II  + E Y P AI LQCGADSLAGDRLG FNL + GH  CVR+ K   LP++V GG
Sbjct: 306 FQSIIGSINERYRPSAIALQCGADSLAGDRLGRFNLRVQGHGACVRYCKSLGLPMIVFGG 365

Query: 298 GGYTKENVARCWTVETGILL--DTELPNEIPENEYIK--------YFAPECSLRIPNGHI 347
           GGYT  NVAR W  ET I +  DT +P  IP++   +        + + E SL  P  H 
Sbjct: 366 GGYTPRNVARAWAYETAIAIGADTRIPETIPDHAPWREHFIHDTLFPSLEQSLNEPR-HN 424

Query: 348 VCSFKEIDKFILFNKQILYFI 368
             S K + + I   ++ L F+
Sbjct: 425 RNSDKRLREIITHVQEQLRFV 445


>gi|145513931|ref|XP_001442876.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410237|emb|CAK75479.1| unnamed protein product [Paramecium tetraurelia]
          Length = 482

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 171/378 (45%), Positives = 240/378 (63%), Gaps = 37/378 (9%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY-DLHKKMEIYRPHKAYPVELA 61
           S  +++YFY+  +G  ++G  HPMKP R+ M H L++++  L++ +++Y   +A   EL 
Sbjct: 8   SSRRVAYFYNRLIGKFHYGKEHPMKPKRIAMAHSLIVNFGQLYRSLDVYLIREAQLEELQ 67

Query: 62  QFHSADYVEFLHRITPDTQHLFRQEL---------------------------------T 88
           +FH  +YV +L +   + +  F +E                                  +
Sbjct: 68  KFHDPEYVTYLSQYMSENKVNFVKEYCSTNNDGVIPENLLEEYRLITKWSQNKNTKNLNS 127

Query: 89  KYNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 146
           +Y +G+  D P F  LF +CQ  AG +ID A  +     DIAINW+GGLHHAKK EA+GF
Sbjct: 128 EYKVGDSADNPTFSGLFSYCQFSAGASIDCAHTILTGQADIAINWSGGLHHAKKKEAAGF 187

Query: 147 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTG 206
           CYIND+VL ILELL+ + RVLY+DID HHGDGVEEAFY T+RVMT+SFH++GD FFPGTG
Sbjct: 188 CYINDIVLCILELLRIYVRVLYVDIDCHHGDGVEEAFYLTNRVMTLSFHQYGDDFFPGTG 247

Query: 207 DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 266
            +  +G   G++YA+NVPLK GI D  +  LFK + S+V+ET+ P  +V+QCGADSL+ D
Sbjct: 248 QLNSVGLGVGRYYAVNVPLKPGISDEPYLDLFKKVTSRVMETFRPDCVVMQCGADSLSLD 307

Query: 267 RLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 326
           RLG  NLSI GH +C+ ++K+F +PL++ GGGGYT +NV+RCW  ETGI L   +   IP
Sbjct: 308 RLGALNLSIKGHGQCISYMKQFGIPLILLGGGGYTIQNVSRCWAYETGICLGQTIDQSIP 367

Query: 327 ENE-YIKYFAPECSLRIP 343
            N+ Y K +  +  L  P
Sbjct: 368 SNDVYYKNYGGDYHLHFP 385


>gi|400592571|gb|EJP60722.1| histone deacetylase [Beauveria bassiana ARSEF 2860]
          Length = 494

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 177/335 (52%), Positives = 229/335 (68%), Gaps = 15/335 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA FHS 
Sbjct: 64  VSFHCNPDMEKHHFGMTHPMKPWRLTLSKSLIYSYGMSFAMDNYVSRAATYEELATFHST 123

Query: 67  DYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           DY++FL  + P+   + L  Q    K+NLG  DCP+F+ L+++C + AGG +D AR+L +
Sbjct: 124 DYLDFLGTVLPEPVPRDLENQNPDLKFNLGGSDCPLFDGLYDYCSMSAGGALDGARKLCS 183

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           +  DIA+ W GGLHHAKK EASGFCYIND+V+ IL+LL+Y+ RVLYIDIDVHHGDGVEEA
Sbjct: 184 KQSDIAVAWGGGLHHAKKAEASGFCYINDIVVAILQLLRYYPRVLYIDIDVHHGDGVEEA 243

Query: 183 FYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRL 237
           F+ TDRVMTVSFHK+  + FFPGTG + + G +     G  +A+NVPL DGI D  +  L
Sbjct: 244 FFSTDRVMTVSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAVNVPLNDGITDEQYDWL 303

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F +II ++VE + PGAI LQCGADSLAGDRLG FNL + GH  CV F KK+NLPL++ GG
Sbjct: 304 FNSIIGRIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVEFCKKYNLPLILFGG 363

Query: 298 GGYTKENVARCWTVETGIL------LDTELPNEIP 326
           GGYT  NVAR W  ET I       ++  LP  +P
Sbjct: 364 GGYTPRNVARAWAYETSIAIGCDDKINPTLPQHLP 398


>gi|406858802|gb|EKD11890.1| histone deacetylase domain-containing protein [Marssonina brunnea
           f. sp. 'multigermtubi' MB_m1]
          Length = 475

 Score =  349 bits (895), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 176/328 (53%), Positives = 225/328 (68%), Gaps = 12/328 (3%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + D+   +FG +HPMKP RL +   LV+SY +H  M+ Y   +A   EL  FHS 
Sbjct: 48  VSWHSNPDIEKHHFGHSHPMKPWRLTLAKSLVMSYGMHAAMDTYVSRQATREELEDFHSE 107

Query: 67  DYVEFLHR---ITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
           DY+++L     + PD        L     G DCP+FE LF +C +YAG +IDAAR+L N 
Sbjct: 108 DYLDYLKTAKVVLPDDDTPKDFSLG----GTDCPIFEGLFNYCSMYAGASIDAARKLCNW 163

Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             DIAINW+GGLHHAKK EASGFCY+ND+ L IL+LL+   RVLYIDID+HHGDGVEEAF
Sbjct: 164 ESDIAINWSGGLHHAKKAEASGFCYVNDITLAILQLLRTFQRVLYIDIDLHHGDGVEEAF 223

Query: 184 YFTDRVMTVSFHKF-GDLFFPGTGDVKEIG---ERE-GKFYAINVPLKDGIDDTSFTRLF 238
           + TDRVMT+S HK+ G  FFPGTGD+   G   ER  G  +A+NVPL DGI+D  +  LF
Sbjct: 224 WSTDRVMTLSIHKYEGMNFFPGTGDLDRTGPTDERNPGAHHAVNVPLLDGINDEQYIYLF 283

Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGG 298
           KT++ + ++ + P AIVLQCGADSLAGDRLG FN+ ++GH EC++F K   +PLL+ GGG
Sbjct: 284 KTVVQECMDRFQPEAIVLQCGADSLAGDRLGRFNVQVEGHGECIKFCKAKKVPLLLVGGG 343

Query: 299 GYTKENVARCWTVETGILLDTELPNEIP 326
           GYT  NVAR WT ET I ++  L   IP
Sbjct: 344 GYTPRNVARAWTNETSIAIECGLNPIIP 371


>gi|322711589|gb|EFZ03162.1| histone deacetylase phd1 [Metarhizium anisopliae ARSEF 23]
          Length = 499

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 229/342 (66%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA FHS
Sbjct: 68  NVSFHCNPDMEKHHFGMTHPMKPWRLTLSKSLIYSYGMSFAMDNYISRAATYEELASFHS 127

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY++FL  + P+   + L  Q    K+NLG  DCP+F+ L+++C + AGG +DAAR+++
Sbjct: 128 TDYLDFLGTVLPEPVPRDLENQNPDLKFNLGGSDCPLFDGLYDYCSLSAGGALDAARKIS 187

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           ++  DIAI W GGLHHAKK EASGFCYIND+V+ ILELL+++ RVLYIDIDVHHGDGVEE
Sbjct: 188 SKQSDIAIAWGGGLHHAKKAEASGFCYINDIVIAILELLRFYPRVLYIDIDVHHGDGVEE 247

Query: 182 AFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+    FFPGTG + + G +     G  +A+NVPL DGI D  +  
Sbjct: 248 AFFSTDRVMTVSFHKYDPHNFFPGTGALDDNGPKNEHNPGAHHAVNVPLNDGITDEQYDM 307

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF +II K+VE + P AI LQCGADSLAGDRLG FNL + GH  CV F KK  LPL++ G
Sbjct: 308 LFNSIIGKIVEKFRPSAIALQCGADSLAGDRLGRFNLQVQGHGACVEFCKKVGLPLILFG 367

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I +  +      LP   P  E  +
Sbjct: 368 GGGYTPRNVARAWTYETSIAVGCQDNISPVLPQHTPWREQFR 409


>gi|358378700|gb|EHK16381.1| hypothetical protein TRIVIDRAFT_214375 [Trichoderma virens Gv29-8]
          Length = 496

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 177/342 (51%), Positives = 229/342 (66%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + ++   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA FHS
Sbjct: 65  NVSFHCNPEMEKHHFGMTHPMKPWRLTLSKSLIYSYGMSFAMDNYLTRAATYEELASFHS 124

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY++FL  + P+   + L  Q    KYNLG  DCP+F+ L+++C + AG  +DAAR++ 
Sbjct: 125 TDYLDFLGTVLPEAVPRDLENQNPDLKYNLGGSDCPLFDGLYDYCSMSAGSALDAARKIV 184

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           +Q  DIAI W GGLHHAKK EASGFCYIND+V+ ILELL+++ RVLYIDIDVHHGDGVEE
Sbjct: 185 SQQSDIAIAWGGGLHHAKKAEASGFCYINDIVIAILELLRFYPRVLYIDIDVHHGDGVEE 244

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+  + FFPGTG + + G +     G  +A+NVPL DGI D  +  
Sbjct: 245 AFFSTDRVMTVSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAVNVPLNDGITDEQYDM 304

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF  II K+VE + P AI LQCGADSLAGDRLG FNL + GH  CV F K+ N+P+++ G
Sbjct: 305 LFNNIIGKIVEKFRPSAIALQCGADSLAGDRLGRFNLQVQGHGACVEFCKRLNIPMILFG 364

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I ++ +      LP   P  E  +
Sbjct: 365 GGGYTPRNVARAWTYETSIAINCQDKISPILPEHAPWREQFR 406


>gi|238582898|ref|XP_002390074.1| hypothetical protein MPER_10713 [Moniliophthora perniciosa FA553]
 gi|215453057|gb|EEB91004.1| hypothetical protein MPER_10713 [Moniliophthora perniciosa FA553]
          Length = 306

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 163/261 (62%), Positives = 206/261 (78%), Gaps = 2/261 (0%)

Query: 83  FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCE 142
           F +E  KYN+G+DCPVFE LF++C I AGG+++ A RL+   CDIAINWAGGLHHAKK E
Sbjct: 4   FIKEQHKYNVGDDCPVFEGLFDYCSISAGGSMEGAARLSRDKCDIAINWAGGLHHAKKSE 63

Query: 143 ASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFF 202
           ASGFCY+ND+VLGILELL+YH RVLYIDIDVHHGDGVEEAF+ TDRVMTVSFHKFG+ FF
Sbjct: 64  ASGFCYVNDIVLGILELLRYHQRVLYIDIDVHHGDGVEEAFFTTDRVMTVSFHKFGE-FF 122

Query: 203 PGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADS 262
           PGTG+V++ G  +GK Y++N PL+DG+ D ++  +F+ +I++V+ +Y P AIVLQCGADS
Sbjct: 123 PGTGEVRDTGFGKGKNYSLNFPLRDGVTDENYKSVFEPVINEVMASYNPDAIVLQCGADS 182

Query: 263 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELP 322
           L+GD++G  NLS+ GHA CV+FV+  N PLL+ GGGGYT  NV+R W  ETGI    EL 
Sbjct: 183 LSGDKIGSLNLSMRGHANCVKFVRSLNKPLLMLGGGGYTIRNVSRTWAYETGIAAGVELQ 242

Query: 323 NEIPEN-EYIKYFAPECSLRI 342
            EIP   +Y +YF P+  L +
Sbjct: 243 PEIPTPVDYYEYFGPDYQLDV 263


>gi|440635097|gb|ELR05016.1| hypothetical protein GMDG_01587 [Geomyces destructans 20631-21]
          Length = 473

 Score =  348 bits (893), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 185/332 (55%), Positives = 228/332 (68%), Gaps = 14/332 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + ++   +FG +HPMKP RL +   L+ SY +H  M+ Y   KA P ELA+FH+ 
Sbjct: 48  VSWHLNPEIERHHFGRSHPMKPWRLTLAKGLITSYGMHYAMDSYVSRKATPEELAEFHTQ 107

Query: 67  DYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
           DY+++L    P     +      +NLG +DCP+FE LF++C +YAG +IDAAR+L N   
Sbjct: 108 DYLDYLKTAMPCEPVSYPSH--PHNLGGDDCPIFEGLFDYCSMYAGASIDAARKLCNHQS 165

Query: 126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYF 185
           DIAINW+GGLHHAKK EASGFCY+ND+VL IL+LL++H RVLYIDIDVHHGDGVEEAF  
Sbjct: 166 DIAINWSGGLHHAKKSEASGFCYMNDIVLAILQLLRHHPRVLYIDIDVHHGDGVEEAFSS 225

Query: 186 TDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRLFKT 240
           TDRVMTVSFHK+  D FFPGTG +   G  +    G  + +NVPL DGIDD  +T LFKT
Sbjct: 226 TDRVMTVSFHKYDKDNFFPGTGPLNSTGPEDEHNPGAHHTVNVPLNDGIDDEQYTSLFKT 285

Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
           +I   V+ + P AIVLQCGADSLAGDRLG FNL + GH  CV F K   LPLL+ GGGGY
Sbjct: 286 VIQSCVDRFQPSAIVLQCGADSLAGDRLGPFNLQVQGHGACVAFCKSLRLPLLLVGGGGY 345

Query: 301 TKENVARCWTVETGI------LLDTELPNEIP 326
           T  NVAR WT ET I       L+  LPN  P
Sbjct: 346 TPRNVARAWTNETSIAIGCDATLNPILPNHTP 377


>gi|145514912|ref|XP_001443361.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410739|emb|CAK75964.1| unnamed protein product [Paramecium tetraurelia]
          Length = 482

 Score =  347 bits (891), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 173/378 (45%), Positives = 242/378 (64%), Gaps = 37/378 (9%)

Query: 3   SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSY-DLHKKMEIYRPHKAYPVELA 61
           S  +++YFY+  +G  ++G  HPMKP R+ M H L++++  L++ +++Y   +A   EL 
Sbjct: 8   SSRRVAYFYNRLIGKFHYGKEHPMKPKRIAMAHSLIVNFGQLYRSLDVYLIREAQLEELK 67

Query: 62  QFHSADYVEFLHRITPDTQHLFRQE--------------------LTK------------ 89
           +FH  +YV +L +   D +  F +E                    +TK            
Sbjct: 68  KFHDPEYVTYLSQYMSDNKVNFVKEYCSTNNDGVIPENLLEEYRLITKWSQNKNTKNLNA 127

Query: 90  -YNLGE--DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGF 146
            Y +G+  D P F  LF +CQ  AG +ID A  +     DIAINW+GGLHHAKK EA+GF
Sbjct: 128 EYKVGDSADNPTFSGLFSYCQFSAGASIDCAHTILTGQADIAINWSGGLHHAKKKEAAGF 187

Query: 147 CYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTG 206
           CYIND+VL ILELL+ + RVLY+DID HHGDGVEEAFY T+RVMT+SFH++GD FFPGTG
Sbjct: 188 CYINDIVLCILELLRIYVRVLYVDIDCHHGDGVEEAFYLTNRVMTLSFHQYGDDFFPGTG 247

Query: 207 DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 266
            +  +G   G++YA+NVPLK GI D  +  LFK + S+V+ET+ P  +V+QCGADSL+ D
Sbjct: 248 QLNSVGLGVGRYYAVNVPLKPGISDGPYLDLFKKVTSRVMETFRPDCVVVQCGADSLSLD 307

Query: 267 RLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 326
           RLG  NLSI GH +C+ ++K+F +PL++ GGGGYT +NV+RCW  ETG+ L   +   IP
Sbjct: 308 RLGALNLSIKGHGQCITYMKQFGVPLILLGGGGYTIQNVSRCWAYETGLCLGQNIDEPIP 367

Query: 327 ENE-YIKYFAPECSLRIP 343
            N+ Y K ++ +  L  P
Sbjct: 368 TNDVYYKNYSGDYHLHFP 385


>gi|322697624|gb|EFY89402.1| histone deacetylase phd1 [Metarhizium acridum CQMa 102]
          Length = 499

 Score =  347 bits (889), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 227/342 (66%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   ELA FHS
Sbjct: 68  NVSFHCNPDMEKHHFGMTHPMKPWRLTLSKSLIYSYGMSFAMDNYISRAATYEELASFHS 127

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY++FL  + P+   + L  Q    K+NLG  DCP+F+ L+++C + AGG +DAAR++ 
Sbjct: 128 TDYLDFLGTVLPEPVPRDLENQNPDLKFNLGGSDCPLFDGLYDYCSLSAGGALDAARKIT 187

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           ++  DIAI W GGLHHAKK EASGFCYIND+V+ ILELL+++ RVLYIDIDVHHGDGVEE
Sbjct: 188 SKQSDIAIAWGGGLHHAKKAEASGFCYINDIVIAILELLRFYPRVLYIDIDVHHGDGVEE 247

Query: 182 AFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMT SFHK+    FFPGTG + + G +     G  +A+NVPL DGI D  +  
Sbjct: 248 AFFSTDRVMTASFHKYDPHNFFPGTGALDDNGPKNEHNPGAHHAVNVPLNDGITDEQYDM 307

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF +II K+VE + P AI LQCGADSLAGDRLG FNL + GH  CV F KK  LPL++ G
Sbjct: 308 LFNSIIGKIVEKFRPSAIALQCGADSLAGDRLGRFNLQVQGHGACVEFCKKVGLPLILFG 367

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I +  +      LP   P  E  +
Sbjct: 368 GGGYTPRNVARAWTYETSIAVGCQDNISPVLPQHTPWREQFR 409


>gi|46108942|ref|XP_381529.1| hypothetical protein FG01353.1 [Gibberella zeae PH-1]
          Length = 502

 Score =  347 bits (889), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 233/342 (68%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   EL +FHS
Sbjct: 68  NVSFHCNPDIEEHHFGVTHPMKPWRLTLSKSLIYSYGMSFAMDNYISRSATYEELNEFHS 127

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +DY++FL  + P+   + L  Q +  K+NLG  DCP+F+ LF +C + AGG++DAAR++ 
Sbjct: 128 SDYLDFLGTVLPEPVPRDLENQGVDLKFNLGGSDCPLFDGLFNYCSLSAGGSLDAARKIC 187

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           ++  DIAI+W GGLHHAK+ EASGFCYIND+V+ IL+LL++  RVLYIDIDVHHGDGVEE
Sbjct: 188 SKQSDIAISWGGGLHHAKRSEASGFCYINDIVIAILQLLRHFPRVLYIDIDVHHGDGVEE 247

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+  + FFPGTG + + G +     G  +A NVPL DGI D  +  
Sbjct: 248 AFFSTDRVMTVSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAFNVPLNDGITDEQYDH 307

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF T+I K+VE + PGAI LQCGADSLAGDRLG FNL + GH  CV+F K   +P+++ G
Sbjct: 308 LFNTVIGKIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVKFCKDMGIPMILFG 367

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I ++ +      LP   P  ++ +
Sbjct: 368 GGGYTPRNVARAWTYETSIAINAQDKINPILPEHAPWRDHFR 409


>gi|408388597|gb|EKJ68277.1| hypothetical protein FPSE_11521 [Fusarium pseudograminearum CS3096]
          Length = 502

 Score =  346 bits (888), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 233/342 (68%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   EL +FHS
Sbjct: 68  NVSFHCNPDIEEHHFGVTHPMKPWRLTLSKSLIYSYGMSFAMDNYISRSATYEELNEFHS 127

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +DY++FL  + P+   + L  Q +  K+NLG  DCP+F+ LF +C + AGG++DAAR++ 
Sbjct: 128 SDYLDFLGTVLPEPVPRDLENQGVDLKFNLGGSDCPLFDGLFNYCSLSAGGSLDAARKIC 187

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           ++  DIAI+W GGLHHAK+ EASGFCYIND+V+ IL+LL++  RVLYIDIDVHHGDGVEE
Sbjct: 188 SKQSDIAISWGGGLHHAKRSEASGFCYINDIVIAILQLLRHFPRVLYIDIDVHHGDGVEE 247

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+  + FFPGTG + + G +     G  +A NVPL DGI D  +  
Sbjct: 248 AFFSTDRVMTVSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAFNVPLNDGITDEQYDH 307

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF T+I K+VE + PGAI LQCGADSLAGDRLG FNL + GH  CV+F K   +P+++ G
Sbjct: 308 LFNTVIGKIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVKFCKDMGIPMILFG 367

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I ++ +      LP   P  ++ +
Sbjct: 368 GGGYTPRNVARAWTYETSIAINAQDKINPILPEHAPWRDHFR 409


>gi|355564817|gb|EHH21317.1| hypothetical protein EGK_04341 [Macaca mulatta]
          Length = 414

 Score =  346 bits (888), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 165/316 (52%), Positives = 220/316 (69%), Gaps = 32/316 (10%)

Query: 33  MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNL 92
           MTH+L+L+Y L++KM I+RPHKA   E+   HS DY++FLH   PD    + +++ ++N+
Sbjct: 1   MTHNLLLNYSLYRKMGIHRPHKANAEEMTCSHSNDYIKFLHSTRPDNMSEYSKQMQRFNI 60

Query: 93  GEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDL 152
           GEDC VF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHH KK EASGFC +ND+
Sbjct: 61  GEDCLVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHEKKSEASGFCDVNDV 120

Query: 153 VLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG 212
           VL ILELLKYH RVL IDID+ HGDGVEEAFY TDRVMTVSFH +G+ +FPGTG + +IG
Sbjct: 121 VLAILELLKYHQRVLCIDIDIPHGDGVEEAFYTTDRVMTVSFHNYGE-YFPGTGALWDIG 179

Query: 213 EREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 272
             +GK+YA+N PL+DGI+D S   +FK I+SKV+E + P A+ LQCG+DSL+GDRLGCF+
Sbjct: 180 AGKGKYYAVNYPLRDGIEDDSCEIIFKPIMSKVMEMFQPSAVALQCGSDSLSGDRLGCFS 239

Query: 273 LSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIK 332
           L+I G+A+C                               T + LDTE+P E+P N+Y +
Sbjct: 240 LTIKGNAKC-------------------------------TAVALDTEIPTELPYNDYFE 268

Query: 333 YFAPECSLRIPNGHIV 348
           YF P+  L I   ++ 
Sbjct: 269 YFGPDFKLHISPSNMT 284


>gi|429862722|gb|ELA37356.1| histone deacetylase phd1 [Colletotrichum gloeosporioides Nara gc5]
          Length = 494

 Score =  346 bits (888), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 176/342 (51%), Positives = 227/342 (66%), Gaps = 15/342 (4%)

Query: 7   ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
           +S+  + ++   +FG  HPMKP RL ++  L+ SY +   M+ Y    A   EL  FHS 
Sbjct: 64  VSFHCNPEMEKHHFGQTHPMKPWRLTLSKSLIYSYGMSFAMDNYIARAATYEELNDFHSD 123

Query: 67  DYVEFLHRITPDTQHLFRQELT---KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNN 122
           DY++FL  + P+             K+NLG  DCP+FE L+++C + AGG++DAAR++  
Sbjct: 124 DYLDFLGTVLPEPVPRDVDNANPDLKFNLGGSDCPLFEGLYDYCSMSAGGSLDAARKICA 183

Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
           Q  DIA++W GGLHHAKK EASGFCYIND+VL IL+LL+ + RVLYIDIDVHHGDGVEEA
Sbjct: 184 QQSDIAVSWGGGLHHAKKAEASGFCYINDIVLAILQLLRCYPRVLYIDIDVHHGDGVEEA 243

Query: 183 FYFTDRVMTVSFHKFGDL-FFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTRL 237
           FY TDRVMTVSFHK+  L FFPGTG + + G +     G  +AINVPL DGI D  +  L
Sbjct: 244 FYSTDRVMTVSFHKYDPLNFFPGTGGLDDNGPKNEHNPGAHHAINVPLNDGITDEQYKWL 303

Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
           F+ +I + +E + P AI LQCGADSLAGDRLG FNL + GH  CV F KKFN+P+++ GG
Sbjct: 304 FENVIGQCMEKFRPSAIALQCGADSLAGDRLGRFNLQVQGHGACVEFCKKFNVPMILFGG 363

Query: 298 GGYTKENVARCWTVETGILLDTE------LPNEIPENEYIKY 333
           GGYT  NVAR W  ET I +D +      +P   P  E  +Y
Sbjct: 364 GGYTPRNVARAWAFETSIAIDCQDKIDPIIPTHAPWREQFRY 405


>gi|402086656|gb|EJT81554.1| histone deacetylase phd1 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 496

 Score =  346 bits (887), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 174/332 (52%), Positives = 226/332 (68%), Gaps = 11/332 (3%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + ++   +FG  HPMKP RL ++  L++SY +   M+ Y    A   EL  FH+
Sbjct: 65  NVSFHTNPEMEKHHFGQTHPMKPWRLTLSKSLIMSYGMSFAMDNYISRAATYEELNMFHA 124

Query: 66  ADYVEFLHRITPDTQHLFRQELT---KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
           +DY+EFL  + P+        L    K+NLG  DCP+FE L+++C + AGG++DAAR++ 
Sbjct: 125 SDYLEFLATVAPEPVPRDVDNLNPDLKFNLGGSDCPLFEGLYDYCSMSAGGSLDAARKIC 184

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           N+  DIAI W GGLHHAK+ EASGFCYIND+V+ IL+LL+ + RVLYIDIDVHHGDGVEE
Sbjct: 185 NKESDIAIAWGGGLHHAKRSEASGFCYINDIVIAILQLLRCYPRVLYIDIDVHHGDGVEE 244

Query: 182 AFYFTDRVMTVSFHKFGDL-FFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMTVSFHK+    FFPGTG + E G +     G  +AINVPL DGI D  + R
Sbjct: 245 AFFSTDRVMTVSFHKYDPQNFFPGTGALDENGPKNERNPGAHHAINVPLNDGITDEQYER 304

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF+ +I + VE + P AI LQCGADSLAGDRLG FNL + GH  CV F KK  +P+++ G
Sbjct: 305 LFQDVIGQCVEKFRPSAIALQCGADSLAGDRLGRFNLQVQGHGSCVAFCKKLGIPMILFG 364

Query: 297 GGGYTKENVARCWTVETGILLD--TELPNEIP 326
           GGGYT  NVAR W  ET I +D  T++   IP
Sbjct: 365 GGGYTPRNVARAWAYETSIAIDCHTKIDPTIP 396


>gi|358400771|gb|EHK50097.1| hypothetical protein TRIATDRAFT_212638 [Trichoderma atroviride IMI
           206040]
          Length = 496

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/342 (51%), Positives = 229/342 (66%), Gaps = 15/342 (4%)

Query: 6   KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
            +S+  + D+   +FG  HPMKP RL ++  L+ SY +   M+ +    A   ELA FHS
Sbjct: 65  NVSFHCNPDMEQHHFGMTHPMKPWRLTLSKSLIYSYGMSFAMDNFVTRAATYEELASFHS 124

Query: 66  ADYVEFLHRITPDT--QHLFRQELT-KYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLN 121
            DY++FL  + P+   + L  Q    K+NLG  DCP+F+ L+++C + AG  +DAAR++ 
Sbjct: 125 TDYLDFLGTVLPEPVPRDLESQNPDLKFNLGGSDCPLFDGLYDYCSMSAGSALDAARKIC 184

Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
           ++  DIAI W GGLHHAKK EASGFCYIND+V+ ILELL+++ RVLYIDIDVHHGDGVEE
Sbjct: 185 SKQSDIAIAWGGGLHHAKKAEASGFCYINDIVIAILELLRFYPRVLYIDIDVHHGDGVEE 244

Query: 182 AFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSFTR 236
           AF+ TDRVMT SFHK+  + FFPGTG + + G +     G  +A+NVPL DGI D  +  
Sbjct: 245 AFFSTDRVMTCSFHKYDPNNFFPGTGALDDNGPKSEHNPGAHHAVNVPLNDGITDEQYDM 304

Query: 237 LFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
           LF  II ++VE + PGAI LQCGADSLAGDRLG FNL + GH  CV F K+ N+P+++ G
Sbjct: 305 LFNNIIGRIVEKFRPGAIALQCGADSLAGDRLGRFNLQVQGHGACVAFCKRMNIPMILFG 364

Query: 297 GGGYTKENVARCWTVETGILLDTE------LPNEIPENEYIK 332
           GGGYT  NVAR WT ET I +D +      LP   P  E  +
Sbjct: 365 GGGYTPRNVARAWTYETSIAIDCQDKINPILPEHTPWREQFR 406


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.326    0.144    0.456 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,441,843,754
Number of Sequences: 23463169
Number of extensions: 289954506
Number of successful extensions: 662636
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4016
Number of HSP's successfully gapped in prelim test: 2099
Number of HSP's that attempted gapping in prelim test: 646838
Number of HSP's gapped (non-prelim): 6804
length of query: 371
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 227
effective length of database: 8,980,499,031
effective search space: 2038573280037
effective search space used: 2038573280037
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)