BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017454
(371 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/347 (89%), Positives = 330/347 (95%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+
Sbjct: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM 60
Query: 61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
AQFHS DYVEFL RI P+ Q+LF E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRL
Sbjct: 61 AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL 120
Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
NN+LCDIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct: 121 NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180
Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
EAFYFTDRVMTVSFHKFGD FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+T
Sbjct: 181 EAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRT 240
Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
IISKVVE Y PGAIVLQCGADSLA DRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGY
Sbjct: 241 IISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY 300
Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHI 347
TKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHI
Sbjct: 301 TKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHI 347
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 222/340 (65%), Positives = 283/340 (83%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 219/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
++ K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 218/340 (64%), Positives = 281/340 (82%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
++ K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHI 345
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 213/346 (61%), Positives = 283/346 (81%), Gaps = 1/346 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVM+VSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
+KV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLP+L+ GGGGYT
Sbjct: 246 TKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L I ++
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMT 351
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 486 bits (1252), Expect = e-137, Method: Compositional matrix adjust.
Identities = 220/343 (64%), Positives = 281/343 (81%), Gaps = 2/343 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
S K+SYFYD +VG+ Y+GPNHPMKPHR+ MTH LVL+Y ++KKM+I+RP KA +EL
Sbjct: 2 STRKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTN 61
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS DY+ FL +TPD H + ++L K+N+ EDCPVF+ ++ FCQI +GG+I A ++N+
Sbjct: 62 FHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNS 121
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
+ D+AINWAGGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 122 KESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEA 181
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+GD +FPGTGDVK+IG +GK+Y++N PLKDGIDD S+ +F+ II
Sbjct: 182 FYTTDRVMTVSFHKYGD-YFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPII 240
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
V++ Y PGA+V+QCGADSL GDRLGCFNL++ GHA+C+ F+K FN+PL+V GGGGYT
Sbjct: 241 RSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTI 300
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PN 344
+NVARCWT ET IL+D+EL +E+P N+Y++Y+ PE L I PN
Sbjct: 301 KNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPN 343
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 214/340 (62%), Positives = 275/340 (80%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
SK ++ Y+YD D+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS +YV FL I PD + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN
Sbjct: 65 FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N+PL+DG+DD ++ +F II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NV+RCWT ET + L E+ NE+P N+Y +YF P+ L I
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHI 343
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 217/365 (59%), Positives = 280/365 (76%), Gaps = 6/365 (1%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++YA+NVPL+DGIDD S+ LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
RCWT ET +L+D + E+P +EY +YFAP+ +L RI N + +I + I
Sbjct: 305 RCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 361 NKQIL 365
N ++L
Sbjct: 365 NLKML 369
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/345 (62%), Positives = 280/345 (81%), Gaps = 1/345 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV VK FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/346 (61%), Positives = 283/346 (81%), Gaps = 1/346 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEI+RPHKA ++ +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAEDMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N L+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYALRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLPLL+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L I ++
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMT 351
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/365 (58%), Positives = 279/365 (76%), Gaps = 6/365 (1%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLY+DID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I +V+
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVI 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV++VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
RCWT ET +L+D + E+P +EY +YFAP+ +L RI N + +I + I
Sbjct: 305 RCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 361 NKQIL 365
N ++L
Sbjct: 365 NLKML 369
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 216/365 (59%), Positives = 278/365 (76%), Gaps = 6/365 (1%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
RCWT ET +L++ + E+P +EY +YFAP+ +L RI N + +I + I
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 361 NKQIL 365
N ++L
Sbjct: 365 NLKML 369
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 216/345 (62%), Positives = 279/345 (80%), Gaps = 1/345 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV K FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIR 307
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 216/365 (59%), Positives = 278/365 (76%), Gaps = 6/365 (1%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
RCWT ET +L++ + E+P +EY +YFAP+ +L RI N + +I + I
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 361 NKQIL 365
N ++L
Sbjct: 365 NLKML 369
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 213/342 (62%), Positives = 279/342 (81%), Gaps = 2/342 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
SK ++ YF+D DVG+ ++GP HPMKPHRLC+T++LVL+Y LHKKM +Y+ A ++ +
Sbjct: 11 SKTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLK 70
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS DYV+FL R+TP+ + ++ ++ ++++GEDCPVF L+++C IY+GG+I+ A +LN+
Sbjct: 71 FHSEDYVDFLERVTPENINEWK-DVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNH 129
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
++ DIAINW+GGLHHA+K EASGFCY+ND+VL ILELLK+HARVLYIDIDVHHGDGV+EA
Sbjct: 130 RMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEA 189
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHKFG FFPGTGD+ EIG + GK Y++NVPL DGIDD ++ +FK +I
Sbjct: 190 FYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVI 249
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
V++ Y P IVLQCGADSL DRLGCFNL+I GHAECVRFVK FN+P LV GGGGYT
Sbjct: 250 QGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTV 309
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
NVARCWT ET + +DTE+ NE+P N+YI++++P+ L IP+
Sbjct: 310 RNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQL-IPD 350
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
RCWT ET +L++ + E+P +EY +YFAP+ +L RI N + +I + I
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 361 NKQIL 365
N ++L
Sbjct: 365 NLKML 369
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 215/365 (58%), Positives = 278/365 (76%), Gaps = 6/365 (1%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFILF 360
RCWT ET +L++ + E+P +EY +YFAP+ +L RI N + +I + I
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 361 NKQIL 365
N ++L
Sbjct: 365 NLKML 369
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/367 (58%), Positives = 280/367 (76%), Gaps = 6/367 (1%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
++ SYFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P+KA ++ +FH
Sbjct: 3 NRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
S DY++FL +++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LN+++
Sbjct: 63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
TDRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242
Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT N
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRN 302
Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFI 358
VARCWT ET +LL+ + +E+P +EY +YFAP+ +L RI N + ++I + +
Sbjct: 303 VARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362
Query: 359 LFNKQIL 365
N ++L
Sbjct: 363 FENLKML 369
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/340 (63%), Positives = 277/340 (81%), Gaps = 1/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K ++ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DYV+FL I PD + +++ ++N+GEDCPVF+ L+EFCQ+ +GG++ A +LN
Sbjct: 66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ ++FK I+
Sbjct: 186 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIM 244
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
KV+E Y P AI LQCGADSL+GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT
Sbjct: 245 CKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTI 304
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET L E+ NE+P N+Y +YF P+ L I
Sbjct: 305 RNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHI 344
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 265/334 (79%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A LNN+ CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I +V+
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVI 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV++VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSL 340
RCWT ET +L+D + E+P +EY +YFAP+ +L
Sbjct: 305 RCWTYETSLLVDETISEELPYSEYFEYFAPDFTL 338
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 212/367 (57%), Positives = 279/367 (76%), Gaps = 6/367 (1%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
++ +YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P+KA ++ +FH
Sbjct: 3 NRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
S DY++FL +++P+ F + L +N+G DCPVF LFEFC Y G ++ A +LN+++
Sbjct: 63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
TDRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242
Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT N
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRN 302
Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSL------RIPNGHIVCSFKEIDKFI 358
VARCWT ET +L++ + +E+P +EY +YFAP+ +L RI N + ++I + +
Sbjct: 303 VARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362
Query: 359 LFNKQIL 365
N ++L
Sbjct: 363 FENLKML 369
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 207/339 (61%), Positives = 267/339 (78%), Gaps = 1/339 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K +++Y+YD ++G+ Y+G H MKPHR+ MTHHLVL+Y L++ +EI+RP A ++ +F
Sbjct: 12 KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y+ FL PD F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct: 72 HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHK+GD FFPGTGD+K+IG +GK Y++NVPL+DGI D S+ +FK I++
Sbjct: 192 YTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMT 250
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT
Sbjct: 251 KVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCWT ET I +D E+PNE+P N+Y +YF P L I
Sbjct: 311 NVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHI 349
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/345 (61%), Positives = 274/345 (79%), Gaps = 1/345 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVS + FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSEVSMVN-NFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV VK FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIV 348
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMT 352
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 206/357 (57%), Positives = 276/357 (77%), Gaps = 3/357 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K +++YFYD DVG+ +G HPMKPHR+ M H L+++Y L+KKMEIYR A E+ QF
Sbjct: 18 KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ +Y++FL R+TPD +F++E K+N+G+DCPVF+ L+E+C I GG+++ A RLN
Sbjct: 78 HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMT SFHK+G+ FFPGTG++++IG GK YA+NVPL+DGIDD ++ +F+ +I
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIK 256
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPE--CSLRIPNGHIVCSFKEIDKFI 358
NVAR W ETG+L + L ++P NEY +Y+ P+ S+R N V + + +DK +
Sbjct: 317 NVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVM 373
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/341 (60%), Positives = 265/341 (77%), Gaps = 3/341 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++SYFY+ +G Y+G HPMKPHR+ M H L++ Y LH+++EI RP A ++ +F
Sbjct: 18 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRF 77
Query: 64 HSADYVEFLHRITPDT--QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
HS +YV+FL ++P++ + L ++N+GEDCPVF+ LF+FC+ AGG+I AA +LN
Sbjct: 78 HSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLN 137
Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
Q DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK RVLYIDIDVHHGDGVEE
Sbjct: 138 RQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEE 197
Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
AFY TDRVMTVSFHKFGD FFPGTG ++++G +GK+YA+NVPL DG+DD SF LF+ +
Sbjct: 198 AFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPL 256
Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT
Sbjct: 257 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYT 316
Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCW ET + + E N++P NEY +YF P+ +L +
Sbjct: 317 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHV 357
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/339 (62%), Positives = 271/339 (79%), Gaps = 1/339 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ YFYD +VG+ Y+G HPMKPHR+ MTH L+ Y L + M++ +P A +L +F
Sbjct: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ DYV FL ITP+TQ ++L ++N+GEDCPVF+ L+ FCQ YAGG++ + +LN+
Sbjct: 76 HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHKFGD +FPGTG +++IG GK+Y++NVPL DGIDD S+ LFK I+
Sbjct: 196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMG 254
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCW ETG+ L E+ +++PE+EY +YF P+ +L +
Sbjct: 315 NVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHV 353
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/340 (61%), Positives = 268/340 (78%), Gaps = 2/340 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
K ++ YFYD DVG+ Y+G HPMKPHR+ MTH L+ Y L +M++YRP+ A EL +
Sbjct: 21 QKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARERELCR 80
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FH+ +Y+ FL +TP+TQ + L ++N+GE+CPV + L+ FCQ YAG ++ A + N+
Sbjct: 81 FHAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNH 140
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEA
Sbjct: 141 GH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEA 199
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHKFGD +FPGTGD+++IG +GK+Y++NVPL DGIDD S+ LFK I+
Sbjct: 200 FYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIM 258
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT
Sbjct: 259 GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTI 318
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVARCW ETG+ L E +++P NEY +YF P+ +L +
Sbjct: 319 RNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHV 358
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/339 (59%), Positives = 262/339 (77%), Gaps = 1/339 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+SYFYD DVG+ ++GP HPMKPHR+ M H+LV++Y+L++K+ + P +A ++ +
Sbjct: 5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ +Y+EFL R+TPDT F+ K+N+G+DCPVF+ L+EFC I AGG+I AA+ LN+
Sbjct: 65 HTDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSG 124
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
+IAINWAGGLHHAKK EASGFCY+ND+ L LELLKYH RVLYIDIDVHHGDGVEE F
Sbjct: 125 NAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFF 184
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMT SFHKFG+ +FPGTG +K+ G GK YA+NVPL+DGIDD S+ +FK +IS
Sbjct: 185 YTTDRVMTCSFHKFGE-YFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVIS 243
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
+++ + P A++LQCG DSLAGDRLGCFNLS+ GH+ CV FVK FNLP++ GGGGYT
Sbjct: 244 HIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVR 303
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
NVAR WT ETG+L EL +P N+Y++Y+ P+ L +
Sbjct: 304 NVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNV 342
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 185/339 (54%), Positives = 250/339 (73%), Gaps = 1/339 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
K +++Y D VG+ ++G HPMKPHR+ +T+HLV+ Y LH KM ++ P A E+++
Sbjct: 24 QKKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSE 83
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FH DY++FL R+TPD F + ++N+G+DCPVF+ +EF Q AG ++DA+R+L
Sbjct: 84 FHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQ 143
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
DIAINW+GGLHHAK+ EASGFCY+ND+VL IL +L++ RVLYIDID+HHGDGV++A
Sbjct: 144 GQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQA 203
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY +DRV+TVSFHK+ FFP TG+ E G + GK++A+NVPL+DGI D +T LFK+II
Sbjct: 204 FYESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSII 263
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
+ T+ P AIVLQCGADSL DRLG FNLSI H ECVRF + FN+P+LV GGGGYT
Sbjct: 264 EPTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTL 323
Query: 303 ENVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSL 340
NVAR W ET I ++ ++P+E+P E Y ++FAP+ +L
Sbjct: 324 RNVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTL 362
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/337 (57%), Positives = 247/337 (73%), Gaps = 2/337 (0%)
Query: 6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
++SY ++ V ++G HPMKP RL +T HLV SY LHK M++Y A EL QFHS
Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86
Query: 66 ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
DYV FL +++P+ + L R L +N+G+DCP+F+NL+++ +Y G ++DA R+L N
Sbjct: 87 EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
DIAINW+GGLHHAKK SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206
Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
TDRV T+SFHK+ FFPGTGD+ EIG +GK +A+NVPL+DGIDD S+ LFK+I+
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266
Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
++ T+ P IV QCGADSL DRLGCFNL+I H ECV+FVK F LP+LV GGGGYT N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326
Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSL 340
V+R WT ETGIL D LP +IPE+ + F P+ SL
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSL 363
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 239/335 (71%), Gaps = 3/335 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++Y+Y DVG ++G HPMKP RL + + LV+SY++ K M + K +++ F
Sbjct: 28 KRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVF 87
Query: 64 HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
H+ DYV FL +TP + L ++N+GEDCP+F L+++C +YAGG+++ ARRLN+
Sbjct: 88 HTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNH 147
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
++ DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 148 KMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 207
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
F +DRVMTVSFH+FG +FPG+G + + G GK++AINVPL I D + +LF+++I
Sbjct: 208 FNNSDRVMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVI 266
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
S V E + P AIVLQCG+DSL DRLG F LS + HA V++VK PL+V GGGGYT
Sbjct: 267 SGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLGGGGYTL 326
Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAP 336
NVARCW +ETG++L + +EIP Y YF P
Sbjct: 327 RNVARCWALETGVILGLRMDDEIPGTSLYSHYFTP 361
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 242/345 (70%), Gaps = 11/345 (3%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++SYFY+ +G Y+G N P KP R+ +TH+L+LSY+LH+ MEI P A + +F
Sbjct: 9 KRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKF 68
Query: 64 HSADYVEFLHRITPDT----QHLFRQELTKYNLGEDC--PVFENLFEFCQIYAGGTIDAA 117
HS +Y+ FL +TP+T + L ++N+ D PVF NLF++C+ YAGG+I AA
Sbjct: 69 HSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAA 128
Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
+LN Q DIAINWAGG+HH KK +ASGF Y+ND+VL ILELLK RVLYI+I HGD
Sbjct: 129 AKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGD 188
Query: 178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
VEEAF TDRVMTVSFHK GD TGD+ + GE +G++Y++N PLKDG+DD S L
Sbjct: 189 EVEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGL 243
Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
F +I + +E Y P IVLQCGADSLAGD G FNLSI GH +C+++V+ FN+PL++ GG
Sbjct: 244 FIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGG 303
Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
GGYT NVARCW ET I + +L N++P N+Y+KYF P+ L I
Sbjct: 304 GGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHI 348
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 312 bits (799), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 214/317 (67%), Gaps = 5/317 (1%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D H
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91
Query: 86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
+ +Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct: 92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151
Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
FCY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGT
Sbjct: 152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211
Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
GDV ++G +G++Y++NVP++DGI D + ++ ++++ +V + + P A+VLQ GAD++AG
Sbjct: 212 GDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAG 271
Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
D + FN++ G +C++++ ++ L L+ GGGGY N ARCWT TG++L L +EI
Sbjct: 272 DPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331
Query: 326 PENEYIKYFAPECSLRI 342
P++E+ + P+ L I
Sbjct: 332 PDHEFFTAYGPDYVLEI 348
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 212/315 (67%), Gaps = 1/315 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ + +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
+ ++G +G++Y++NVP++DGI D + + ++++ +V + + P A+VLQ GAD++AGD
Sbjct: 214 MSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDP 273
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G +C+++V ++ L L+ GGGGY N ARCWT TG++L L +EIP+
Sbjct: 274 MCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 328 NEYIKYFAPECSLRI 342
+E+ + P+ L I
Sbjct: 334 HEFFTAYGPDYVLEI 348
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 212/315 (67%), Gaps = 1/315 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ + +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSI 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC 153
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
+ ++G +G++Y++NVP++DGI D + + ++++ +V + + P A+VLQ GAD++AGD
Sbjct: 214 MSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDP 273
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G +C+++V ++ L L+ GGGGY N ARCWT TG++L L +EIP+
Sbjct: 274 MCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 328 NEYIKYFAPECSLRI 342
+E+ + P+ L I
Sbjct: 334 HEFFTAYGPDYVLEI 348
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 211/315 (66%), Gaps = 1/315 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y L K+M + +P A E+A FH+ Y++ LH+++ + + E
Sbjct: 27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDN-DDPET 85
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP+ E ++++ G T+ AA +L IAINW GG HHAKK EASGFC
Sbjct: 86 LEYGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFC 145
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL+L + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 146 YLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 205
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
V +IG +G++Y++NVPL+DGI D + ++ + ++ +V T+ P A+VLQ GAD++AGD
Sbjct: 206 VSDIGLGKGRYYSVNVPLQDGIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDP 265
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G +C+++V ++ LP L+ GGGGY N ARCWT T +++ L +EIP+
Sbjct: 266 MCSFNMTPQGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPD 325
Query: 328 NEYIKYFAPECSLRI 342
+E+ + P+ L +
Sbjct: 326 HEFFTEYGPDYVLEV 340
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 210/315 (66%), Gaps = 1/315 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
V ++G +G++Y++NVP++D I D + + ++++ +V + P A+VLQ GAD++AGD
Sbjct: 214 VSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP 273
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G +C++++ ++ L L+ GGGGY N ARCWT TG++L L +EIP+
Sbjct: 274 MCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 328 NEYIKYFAPECSLRI 342
+E+ + P+ L I
Sbjct: 334 HEFFTAYGPDYVLEI 348
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/315 (47%), Positives = 212/315 (67%), Gaps = 1/315 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P+R M H L+ +Y L K M + +PH A E+A FH+ Y++ LH+I+ D + Q
Sbjct: 36 PNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDDPQS- 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+ LG DCPV E +F++ G T+ AA+ L + CD+AINWAGG HHAKK EASG C
Sbjct: 95 ADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSC 154
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL+L + + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 155 YVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 214
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
V + G +G++YA+NVP +DG+ D + + F +++ +V + P A+V+Q GAD++AGD
Sbjct: 215 VTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDP 274
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G A+C+ ++ + LP L+ GGGGY N ARCWT TG +L L +EIP+
Sbjct: 275 MCSFNMTPVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIPD 334
Query: 328 NEYIKYFAPECSLRI 342
+E+ + P+ SL I
Sbjct: 335 HEFFTEYGPDYSLEI 349
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 288 bits (736), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 200/294 (68%), Gaps = 1/294 (0%)
Query: 49 IYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQI 108
+ +P A E+A FH+ Y++ LH+++ + + E +Y LG DCP+ E ++++
Sbjct: 4 VVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDN-DDPETLEYGLGYDCPITEGIYDYAAA 62
Query: 109 YAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLY 168
G T+ AA +L IA+NW GG HHAKK EASGFCY+ND VLGIL+L + RVLY
Sbjct: 63 VGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVLY 122
Query: 169 IDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDG 228
+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGDV +IG +G++Y+INVPL+DG
Sbjct: 123 VDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSINVPLQDG 182
Query: 229 IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF 288
I D + ++ + ++ +V T+ P A+VLQ GAD++AGD + FN++ +G +C+++V ++
Sbjct: 183 IQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMCSFNMTPEGIGKCLKYVLQW 242
Query: 289 NLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI 342
LP L+ GGGGY N ARCWT T +++ L +EIP++E+ + P+ L I
Sbjct: 243 QLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPDHEFFTEYGPDYVLEI 296
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 140/241 (58%), Gaps = 8/241 (3%)
Query: 77 PDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLH 136
P ++ E +YNL DCP+F L +CQ+ G T++ L+ I INW GG H
Sbjct: 151 PTDTYILNSETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRH 210
Query: 137 HAKKCEASGFCYINDLVLGILELLKYH-ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 195
HA K ASGFCYIND+VL I L K ++ Y+D D+HHGDGVE+AF ++ ++ T+S H
Sbjct: 211 HAFKQRASGFCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVH 270
Query: 196 KFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIV 255
+ FFPGTG + + R+ K +N+PLK G DD + I++ ++E + P A++
Sbjct: 271 LYEPGFFPGTGSLSD--SRKDK-NVVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALI 327
Query: 256 LQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP---LLVTGGGGYTKENVARCWTVE 312
++CG D L GDR + L+I G + + + K + P + + GGGGY ++R +T
Sbjct: 328 IECGGDGLLGDRFNEWQLTIRGLSRIIINIMK-SYPRAHIFLLGGGGYNDLLMSRFYTYL 386
Query: 313 T 313
T
Sbjct: 387 T 387
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 165/348 (47%), Gaps = 19/348 (5%)
Query: 9 YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
+ Y + F HP R+ +T+ L+ + + +I P A EL+ H+ DY
Sbjct: 6 FIYSPSYQTYMFHQEHPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTDDY 65
Query: 69 VEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDI 127
++ + L +E Y LG ED PVF + E + GGT+ AA + +
Sbjct: 66 IQAVK--LAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSGQALH 123
Query: 128 AINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYFT 186
A N GGLHH + ASGFC ND + I + K Y ARVLYID D HHGDGV+ FY
Sbjct: 124 AANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDN 183
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
V T+S H+ G FPGTG ++E G +G Y+ N+PL +D SF ++T S+V
Sbjct: 184 PDVCTLSIHETGRYLFPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVA 243
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGGGGYT 301
+ P I+ Q GAD+ D L + +I+ + E R + GGGGY
Sbjct: 244 AYFEPDVIISQNGADAHYYDPLTHLSATINIYEEIPRLAHTLAHQYCGGKWIAVGGGGYD 303
Query: 302 KENV-----ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
V AR W GI E+P E+I + +C + +P+
Sbjct: 304 IWRVVPRAWARIWLEMKGIDPGHEIP-----PEWIVKWQKQCPVALPS 346
>sp|Q56195|ACUC_STAXY Acetoin utilization protein AcuC OS=Staphylococcus xylosus GN=acuC
PE=3 SV=1
Length = 385
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 160/349 (45%), Gaps = 10/349 (2%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
+ Y Y ++ F HP RL +T L++ K+ I P A EL+
Sbjct: 5 QQTTGYVYANELLQYRFSNKHPFNQMRLKLTTELLMELGQLKQHHIISPRIATDDELSLI 64
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNL-GEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
H+ DY++ + + L E KY L GED F + + GG ++ A ++ +
Sbjct: 65 HAYDYIQAIRHASHGI--LSENEAKKYGLDGEDTLQFRMMHKHSARIVGGALNLADQIMS 122
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL-KYHARVLYIDIDVHHGDGVEE 181
+ GGLHH+ A+GFC ND+ + I L+ KY+ RVL ID D HHGDG +
Sbjct: 123 GTLTNGCHLGGGLHHSLPGRANGFCIYNDVAITISYLMQKYNQRVLCIDTDAHHGDGTQW 182
Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
+FY D+ + S H+ G FPG+G E G +G Y +N+PL+ +D SF +FK
Sbjct: 183 SFYTNDQALIYSIHETGKFLFPGSGHYTERGAEKGFGYTVNIPLEPYTEDQSFLDVFKQT 242
Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTG 296
I VV ++ P IV G D D L + +++ E VK +++ G
Sbjct: 243 IEPVVASFKPDIIVSVHGVDVHYLDPLTHMSCTLNTLYEIPYIVKSLADTYTQGKVIMFG 302
Query: 297 GGGYT-KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
GGGY + V R W+ L+ + P ++ + P + +P
Sbjct: 303 GGGYNIWKVVPRAWSHVFLALIGEQPPTGSLPERWLTKWQPYATCTLPT 351
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 151 bits (381), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 160/346 (46%), Gaps = 10/346 (2%)
Query: 6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHK 66
Query: 66 ADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 67 YDYVEAIKHASHGI--ISEDEAMKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGK 124
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAF 183
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +F
Sbjct: 125 ALNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSF 184
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y + V T S H+ G FPG+G E GE G + +NVPL+ +D+SF FK +
Sbjct: 185 YADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDSSFLECFKLTVE 244
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGGG 298
VV+++ P I+ G D D L N ++ E FVK N +++ GGG
Sbjct: 245 PVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADTYTNGKIIMFGGG 304
Query: 299 GYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
GY V R W+ L+D + + E+I + S +P
Sbjct: 305 GYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLP 350
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 160/351 (45%), Gaps = 10/351 (2%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
+ K +Y Y + F HP RL +T L+L+ +L +I +P A EL
Sbjct: 2 QQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDEL 61
Query: 61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARR 119
H DYVE + + + E KY L E+ F+++ GG + A
Sbjct: 62 MLIHKYDYVEAIKHASHGI--ISEDEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADL 119
Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDG 178
+ + + GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG
Sbjct: 120 IMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDG 179
Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
+ +FY + V T S H+ G FPG+G E GE G + +NVPL+ +D SF F
Sbjct: 180 TQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECF 239
Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLL 293
K + VV+++ P I+ G D D L N ++ E FVK N ++
Sbjct: 240 KLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVI 299
Query: 294 VTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
+ GGGGY V R W+ L+D + + E+I + S +P
Sbjct: 300 MFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLP 350
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 160/351 (45%), Gaps = 10/351 (2%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
+ K +Y Y + F HP RL +T L+L+ +L +I +P A EL
Sbjct: 2 QQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDEL 61
Query: 61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARR 119
H DYVE + + + E KY L E+ F+++ GG + A
Sbjct: 62 MLIHKYDYVEAIKHASHGI--ISEDEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADL 119
Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDG 178
+ + + GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG
Sbjct: 120 IMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDG 179
Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
+ +FY + V T S H+ G FPG+G E GE G + +NVPL+ +D SF F
Sbjct: 180 TQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECF 239
Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLL 293
K + VV+++ P I+ G D D L N ++ E FVK N ++
Sbjct: 240 KLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVI 299
Query: 294 VTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
+ GGGGY V R W+ L+D + + E+I + S +P
Sbjct: 300 MFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLP 350
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 160/351 (45%), Gaps = 10/351 (2%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
+ K +Y Y + F HP RL +T L+L+ +L +I +P A EL
Sbjct: 2 QQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDEL 61
Query: 61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARR 119
H DYVE + + + E KY L E+ F+++ GG + A
Sbjct: 62 MLIHKYDYVEAIKHASHGI--ISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADL 119
Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDG 178
+ + + GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG
Sbjct: 120 IMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDG 179
Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
+ +FY + V T S H+ G FPG+G E GE G + +NVPL+ +D SF F
Sbjct: 180 TQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECF 239
Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLL 293
K + VV+++ P I+ G D D L N ++ E FVK N ++
Sbjct: 240 KLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVI 299
Query: 294 VTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
+ GGGGY V R W+ L+D + + E+I + S +P
Sbjct: 300 MFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLP 350
>sp|P64376|ACUC_STAAN Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
N315) GN=acuC PE=1 SV=1
Length = 389
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 160/351 (45%), Gaps = 10/351 (2%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
+ K +Y Y + F HP RL +T L+L+ +L +I +P A EL
Sbjct: 2 QQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDEL 61
Query: 61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARR 119
H DYVE + + + E KY L E+ F+++ GG + A
Sbjct: 62 MLIHKYDYVEAIKHASHGI--ISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADL 119
Query: 120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDG 178
+ + + GGLHHA+ ASGFC ND+ + + K Y+ RVL ID D HHGDG
Sbjct: 120 IMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDG 179
Query: 179 VEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLF 238
+ +FY + V T S H+ G FPG+G E GE G + +NVPL+ +D SF F
Sbjct: 180 TQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECF 239
Query: 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLL 293
K + VV+++ P I+ G D D L N ++ E FVK N ++
Sbjct: 240 KLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVI 299
Query: 294 VTGGGGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP 343
+ GGGGY V R W+ L+D + + E+I + S +P
Sbjct: 300 MFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLP 350
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.144 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,177,518
Number of Sequences: 539616
Number of extensions: 7001772
Number of successful extensions: 17334
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 17080
Number of HSP's gapped (non-prelim): 106
length of query: 371
length of database: 191,569,459
effective HSP length: 119
effective length of query: 252
effective length of database: 127,355,155
effective search space: 32093499060
effective search space used: 32093499060
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)