Query 017454
Match_columns 371
No_of_seqs 259 out of 1517
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:41:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017454.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017454hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3max_A HD2, histone deacetylas 100.0 4E-109 1E-113 816.8 39.6 354 4-358 2-357 (367)
2 4a69_A Histone deacetylase 3,; 100.0 5E-109 2E-113 819.9 39.8 355 4-358 2-359 (376)
3 3ew8_A HD8, histone deacetylas 100.0 3E-107 1E-111 807.5 33.8 355 1-358 10-366 (388)
4 1c3p_A Protein (HDLP (histone 100.0 1.8E-94 6E-99 717.3 31.3 320 5-327 2-324 (375)
5 1zz1_A Histone deacetylase-lik 100.0 1.1E-90 3.9E-95 688.7 34.9 315 6-333 2-344 (369)
6 3q9b_A Acetylpolyamine amidohy 100.0 1.9E-88 6.4E-93 663.8 30.6 306 8-318 2-341 (341)
7 3men_A Acetylpolyamine aminohy 100.0 5.9E-88 2E-92 663.8 32.7 305 8-318 23-359 (362)
8 2pqp_A HD7A, histone deacetyla 100.0 2E-86 6.9E-91 662.1 32.5 316 5-321 36-382 (421)
9 2vqm_A HD4, histone deacetylas 100.0 1.5E-86 5.3E-91 668.0 30.9 319 3-322 6-354 (413)
10 4hf7_A Putative acylhydrolase; 79.1 1.9 6.5E-05 37.5 4.5 71 220-295 53-124 (209)
11 4h08_A Putative hydrolase; GDS 63.4 21 0.00071 30.1 7.5 58 220-289 48-109 (200)
12 3ced_A Methionine import ATP-b 62.6 5.3 0.00018 31.3 3.1 57 239-295 34-95 (98)
13 3hp4_A GDSL-esterase; psychrot 59.6 9.2 0.00032 31.7 4.4 64 221-295 42-109 (185)
14 3mil_A Isoamyl acetate-hydroly 58.3 21 0.0007 30.7 6.6 69 220-296 46-120 (240)
15 3p94_A GDSL-like lipase; serin 54.7 11 0.00039 31.5 4.2 69 220-296 49-121 (204)
16 1ivn_A Thioesterase I; hydrola 48.8 29 0.001 28.8 5.8 65 220-295 37-105 (190)
17 3bzw_A Putative lipase; protei 48.7 25 0.00085 31.6 5.7 37 232-270 72-109 (274)
18 2vpt_A Lipolytic enzyme; ester 45.8 19 0.00064 30.9 4.2 59 229-295 66-126 (215)
19 2qsw_A Methionine import ATP-b 45.4 3.5 0.00012 32.3 -0.6 53 240-292 38-94 (100)
20 3dff_A Teicoplanin pseudoaglyc 44.9 21 0.00073 32.9 4.6 34 233-266 131-164 (273)
21 1uf3_A Hypothetical protein TT 44.0 62 0.0021 27.4 7.3 57 238-304 21-77 (228)
22 3dfi_A Pseudoaglycone deacetyl 43.4 25 0.00084 32.4 4.8 34 233-266 128-161 (270)
23 3rjt_A Lipolytic protein G-D-S 42.7 7.1 0.00024 33.0 0.9 51 245-295 78-136 (216)
24 1vjg_A Putative lipase from th 40.6 33 0.0011 29.2 5.0 71 221-296 60-136 (218)
25 2qrr_A Methionine import ATP-b 39.4 11 0.00037 29.4 1.4 53 240-292 38-94 (101)
26 1es9_A PAF-AH, platelet-activa 39.4 28 0.00094 30.2 4.3 63 221-295 68-136 (232)
27 1yzf_A Lipase/acylhydrolase; s 39.0 42 0.0014 27.4 5.2 66 220-296 42-111 (195)
28 2q8u_A Exonuclease, putative; 38.6 61 0.0021 30.1 6.9 62 232-301 44-107 (336)
29 3aek_B Light-independent proto 37.9 70 0.0024 32.3 7.6 57 237-304 72-129 (525)
30 3d2m_A Putative acetylglutamat 37.7 38 0.0013 33.2 5.5 69 223-299 15-84 (456)
31 1g3q_A MIND ATPase, cell divis 37.6 25 0.00086 30.5 3.7 21 159-179 27-47 (237)
32 2q0q_A ARYL esterase; SGNH hyd 37.2 34 0.0012 28.8 4.5 49 244-296 76-138 (216)
33 3dhx_A Methionine import ATP-b 36.8 17 0.00058 28.6 2.2 53 240-292 36-92 (106)
34 3he2_A Enoyl-COA hydratase ECH 36.8 1E+02 0.0035 28.1 7.9 75 220-298 35-116 (264)
35 3ea0_A ATPase, para family; al 36.5 16 0.00054 31.9 2.2 19 163-181 34-52 (245)
36 3av0_A DNA double-strand break 36.4 71 0.0024 30.5 7.1 58 232-297 43-103 (386)
37 1ii7_A MRE11 nuclease; RAD50, 35.8 1.2E+02 0.004 28.1 8.3 61 232-301 23-86 (333)
38 1szn_A Alpha-galactosidase; (b 35.8 76 0.0026 31.0 7.3 70 228-297 25-98 (417)
39 3q9l_A Septum site-determining 35.6 28 0.00096 30.6 3.8 22 159-180 27-48 (260)
40 1cp2_A CP2, nitrogenase iron p 34.8 33 0.0011 30.5 4.1 23 161-184 27-49 (269)
41 1hyq_A MIND, cell division inh 33.8 32 0.0011 30.4 3.8 20 160-179 28-47 (263)
42 3l3s_A Enoyl-COA hydratase/iso 33.7 1.3E+02 0.0044 27.2 8.1 76 221-297 22-112 (263)
43 3dci_A Arylesterase; SGNH_hydr 32.7 60 0.0021 28.0 5.4 41 244-288 94-139 (232)
44 1wcv_1 SOJ, segregation protei 32.4 40 0.0014 29.9 4.3 19 160-179 32-50 (257)
45 2o14_A Hypothetical protein YX 32.3 43 0.0015 32.1 4.7 69 220-295 202-275 (375)
46 3pg5_A Uncharacterized protein 31.3 38 0.0013 32.2 4.1 22 161-183 28-49 (361)
47 2f6q_A Peroxisomal 3,2-trans-e 29.8 1.5E+02 0.005 27.1 7.8 78 220-298 40-130 (280)
48 2afh_E Nitrogenase iron protei 29.4 47 0.0016 30.0 4.3 23 161-184 28-50 (289)
49 2xj4_A MIPZ; replication, cell 29.3 51 0.0017 29.9 4.5 22 159-180 29-50 (286)
50 2ej5_A Enoyl-COA hydratase sub 29.3 1.2E+02 0.004 27.2 7.0 63 231-297 28-102 (257)
51 3ez2_A Plasmid partition prote 29.2 46 0.0016 31.8 4.3 17 161-178 141-157 (398)
52 3sll_A Probable enoyl-COA hydr 28.1 2.1E+02 0.007 26.2 8.5 78 220-297 38-131 (290)
53 2buf_A Acetylglutamate kinase; 28.0 1.3E+02 0.0044 27.8 7.1 61 233-300 9-69 (300)
54 1uas_A Alpha-galactosidase; TI 27.6 1.1E+02 0.0037 29.1 6.6 70 228-297 22-95 (362)
55 3kjh_A CO dehydrogenase/acetyl 27.5 33 0.0011 29.7 2.7 18 161-179 26-43 (254)
56 3k9g_A PF-32 protein; ssgcid, 26.1 55 0.0019 29.0 4.0 21 162-183 54-74 (267)
57 3dc7_A Putative uncharacterize 25.3 50 0.0017 28.3 3.5 48 249-296 81-136 (232)
58 2oze_A ORF delta'; para, walke 24.0 69 0.0024 28.9 4.3 21 161-182 63-83 (298)
59 2ap9_A NAG kinase, acetylgluta 23.9 77 0.0026 29.3 4.7 66 229-301 4-69 (299)
60 3ez9_A Para; DNA binding, wing 23.9 46 0.0016 31.9 3.2 17 161-178 144-160 (403)
61 3end_A Light-independent proto 23.6 64 0.0022 29.4 4.0 22 159-181 65-86 (307)
62 1fxw_F Alpha2, platelet-activa 23.3 70 0.0024 27.5 4.1 63 221-295 69-137 (229)
63 3hrx_A Probable enoyl-COA hydr 23.1 1.9E+02 0.0065 25.7 7.1 75 221-298 15-100 (254)
64 1oe4_A SMUG1, single-strand se 22.5 41 0.0014 30.9 2.4 62 178-256 127-189 (247)
65 2j5g_A ALR4455 protein; enzyme 22.5 1.6E+02 0.0055 26.6 6.5 64 231-298 49-126 (263)
66 4fzw_C 1,2-epoxyphenylacetyl-C 22.4 3.6E+02 0.012 24.3 9.0 69 230-298 39-120 (274)
67 3skv_A SSFX3; jelly roll, GDSL 22.4 86 0.003 30.3 4.9 52 243-296 237-290 (385)
68 3fkq_A NTRC-like two-domain pr 22.3 59 0.002 30.9 3.6 24 159-184 168-191 (373)
69 4fva_A 5'-tyrosyl-DNA phosphod 22.0 85 0.0029 26.6 4.3 36 220-259 18-53 (256)
70 2xdq_B Light-independent proto 21.9 97 0.0033 31.0 5.3 54 241-304 79-134 (511)
71 3oc7_A Enoyl-COA hydratase; se 21.8 2.4E+02 0.0083 25.3 7.6 67 231-297 36-116 (267)
72 4dzz_A Plasmid partitioning pr 21.7 1.4E+02 0.0048 24.7 5.6 20 159-179 26-45 (206)
73 3r6h_A Enoyl-COA hydratase, EC 21.6 2E+02 0.0067 25.4 6.8 67 229-297 27-103 (233)
74 3jug_A Beta-mannanase; TIM-bar 21.3 2.8E+02 0.0096 26.1 8.2 64 233-303 117-187 (345)
75 1k7c_A Rhamnogalacturonan acet 21.3 1.6E+02 0.0056 25.4 6.1 41 220-263 35-77 (233)
76 2ph1_A Nucleotide-binding prot 21.2 76 0.0026 28.2 3.9 23 161-184 45-67 (262)
77 4hwg_A UDP-N-acetylglucosamine 21.0 1.8E+02 0.0062 27.6 6.9 52 231-300 76-127 (385)
78 3bfv_A CAPA1, CAPB2, membrane 20.9 73 0.0025 28.9 3.8 17 161-177 109-125 (271)
79 3pea_A Enoyl-COA hydratase/iso 20.8 2.8E+02 0.0096 24.8 7.8 69 229-297 28-106 (261)
80 2hsj_A Putative platelet activ 20.7 35 0.0012 28.8 1.4 44 246-296 81-131 (214)
81 3la6_A Tyrosine-protein kinase 20.5 65 0.0022 29.6 3.4 17 161-177 119-135 (286)
82 2xdq_A Light-independent proto 20.4 1.8E+02 0.0061 28.4 6.8 69 238-317 85-155 (460)
No 1
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.1e-109 Score=816.80 Aligned_cols=354 Identities=62% Similarity=1.184 Sum_probs=340.0
Q ss_pred CCeEEEEEcccccCCCCCCCCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCccchhhh
Q 017454 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83 (371)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~~~~~~ 83 (371)
|+||+|+||++++.|.++++|||+|+|+++++++|+++|+++++++++|++|+.++|++|||++||++|++.+++...++
T Consensus 2 ~~~v~~~y~~~~~~~~~g~~HPe~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~ 81 (367)
T 3max_A 2 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEY 81 (367)
T ss_dssp CCCEEEECCGGGGGCCCCTTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCGGGGGGC
T ss_pred CCeEEEEECccccCcCCCCCCCCCHHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhhCCHHHHHHHHHhCccccchh
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999887655444
Q ss_pred HHhhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHcccccccccccCccCCccccCCCCccccchHHHHHHHHHHhC
Q 017454 84 RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 163 (371)
Q Consensus 84 ~~~~~~~~~~~D~p~~~~~~~~a~~aaG~sl~Aa~~l~~g~~~~ai~~~gG~HHA~~~~a~GFC~~NnvAiAa~~l~~~~ 163 (371)
.+++.+++++.|||+++++|++|+++|||++.||+++++|+.++|+|||||+|||++++++|||+|||+||||++|++..
T Consensus 82 ~~~~~~~~l~~Dtp~~~~~~e~a~~aaGgsl~aa~~v~~~~~~~Ai~~pgG~HHA~~~~a~GFC~~NdvaiAa~~l~~~~ 161 (367)
T 3max_A 82 SKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH 161 (367)
T ss_dssp HHHHHHTTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBCSCHHHHHHHHHTTTC
T ss_pred hhHhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceEecCCCCCCcCCcCCCCCchhhhHHHHHHHHHHHcC
Confidence 45667789999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CcEEEEeccCCCChhhHHhhhcCCCEEEEecccCCCCCCCCCCCCccccCCCCcccEEeecCCCCCChHHHHHHHHHHHH
Q 017454 164 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243 (371)
Q Consensus 164 ~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~~~~yPgtG~~~~~G~g~g~g~~vNvPL~~g~~D~~y~~~~~~~l~ 243 (371)
+||+|||||||||||||+||++||+|||+|+|+++. |||+||..+++|.|+|+|+++|||||+|++|++|+.+|+++|.
T Consensus 162 ~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~-~fPgtg~~~e~G~g~g~g~~vNvPL~~g~~d~~y~~~~~~~~~ 240 (367)
T 3max_A 162 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 240 (367)
T ss_dssp SCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSS-CTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCCchhhHHhcCCCCEEEEecccCCC-CCCCCCCccccCCCCCCceEEEEecCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999964 9999999999999999999999999999999999999999999
Q ss_pred HhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCCCcchHHHHHHHHHhhhhCCCCCC
Q 017454 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 323 (371)
Q Consensus 244 ~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY~~~~~a~~~~~~~~~llg~~~~~ 323 (371)
|++++|+||+||||||||+|.+||||+|+||.+||.+|++.++++++|+++++||||++++++|||+++|++++|+++|+
T Consensus 241 ~~~~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~g~~~~~~~~~~~~~p~v~~~eGGY~~~~var~wt~~ta~~~~~~i~~ 320 (367)
T 3max_A 241 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPN 320 (367)
T ss_dssp HHHHHHCCSEEEEECCGGGBTTCSSCCCCBCHHHHHHHHHHHHTTCCCEEEECCCCCSHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHhCCCEEEEECCccCcCCCCCCCeeeCHHHHHHHHHHHHhcCCCEEEEeCCCCChhHHHHHHHHHHHHHhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhhhccCCCcccccCCCCcc--ccHhhhhhhh
Q 017454 324 EIPENEYIKYFAPECSLRIPNGHIV--CSFKEIDKFI 358 (371)
Q Consensus 324 ~~p~~~~~~~~~p~~~l~~~~~~~~--~~~~~~~~~~ 358 (371)
++|.++||++|||||+|+++++||+ |++|.|++|+
T Consensus 321 ~~p~~~~~~~~~p~~~l~~~~~~~~~~n~~~~l~~i~ 357 (367)
T 3max_A 321 ELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIK 357 (367)
T ss_dssp BCCCCTTGGGGTTTCBSSCCCCSCCCCCCHHHHHHHH
T ss_pred CCCchhhHHhhCCCeeccCCcccccCCCCHHHHHHHH
Confidence 9999999999999999999999998 4777776654
No 2
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.9e-109 Score=819.86 Aligned_cols=355 Identities=59% Similarity=1.141 Sum_probs=341.0
Q ss_pred CCeEEEEEcccccCCCCCCCCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCccchhhh
Q 017454 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83 (371)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~~~~~~ 83 (371)
||||+|+|||+|+.|.++++|||+|+|+++++++|+++|+.+++++++|++|+.++|++|||++||++|++.++.+..++
T Consensus 2 ~~~~~~~y~~~~~~~~~g~~HPe~p~Rl~~i~~~l~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~ 81 (376)
T 4a69_A 2 AKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGF 81 (376)
T ss_dssp CCCEEEECCTTTTCCCCCTTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCTTTGGGG
T ss_pred CCeEEEEEChHHhCcCCCCCCCcCHHHHHHHHHHHHhcCCCCCceEeCCCCCCHHHHHHhCCHHHHHHHHHhCcccchhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999887655555
Q ss_pred HHhhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHcccccccccccCccCCccccCCCCccccchHHHHHHHHHHhC
Q 017454 84 RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 163 (371)
Q Consensus 84 ~~~~~~~~~~~D~p~~~~~~~~a~~aaG~sl~Aa~~l~~g~~~~ai~~~gG~HHA~~~~a~GFC~~NnvAiAa~~l~~~~ 163 (371)
.++..+++++.|||+++++|++|+++|||++.||++|++|++++|+||+||+|||+++++||||+|||+||||++|++++
T Consensus 82 ~~~~~~~~l~~Dtpv~~~~~e~a~~aaGgtl~Aa~~v~~g~~~~A~~~~gG~HHA~~~~a~GFC~~NdvAiAa~~l~~~~ 161 (376)
T 4a69_A 82 TKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH 161 (376)
T ss_dssp HHHHHHHTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTTTC
T ss_pred hhhhceeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCcceeeeCCCCCCcCCcCCCCcchhhhHHHHHHHHHHHhC
Confidence 55667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCCChhhHHhhhcCCCEEEEecccCCCCCCCCCCCCccccCCCCcccEEeecCCCCCChHHHHHHHHHHHH
Q 017454 164 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243 (371)
Q Consensus 164 ~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~~~~yPgtG~~~~~G~g~g~g~~vNvPL~~g~~D~~y~~~~~~~l~ 243 (371)
+||||||||||||||||+|||+||+|||+|+|+++..|||+||..+++|.|+|+|+++|||||+|++|++|+.+|+++|.
T Consensus 162 ~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~D~~yl~~~~~~l~ 241 (376)
T 4a69_A 162 PRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVIN 241 (376)
T ss_dssp SCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCBHHHHHHHHHHHHH
T ss_pred CcEEEEeccCCCCcchhhHhcCCCCEEEEecccCCCcCCCCCCCccccCCCCCCceeEeeecCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998779999999999999999999999999999999999999999999
Q ss_pred HhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCCCcchHHHHHHHHHhhhhCCCCCC
Q 017454 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 323 (371)
Q Consensus 244 ~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY~~~~~a~~~~~~~~~llg~~~~~ 323 (371)
|++++|+||+||||||||+|.+||||+|+||++||.+|++.++++++|+++++||||++++++|||+++|++++|+++|+
T Consensus 242 p~~~~f~Pd~IvvsaG~Da~~~DpLg~l~Lt~~g~~~~~~~l~~~~~p~v~v~eGGY~~~~var~w~~~~a~l~g~~~~~ 321 (376)
T 4a69_A 242 QVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISE 321 (376)
T ss_dssp HHHHHHCCSEEEEECCGGGBTTCSSCCCBBCHHHHHHHHHHHHTTCCCEEEECCCCCSHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHhCCCEEEEeCcccCCCCCcccCeecCHHHHHHHHHHHHHcCCCEEEEECCCCChhHHHHHHHHHHHHhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhhhccCCCcccccC-CCCccc--cHhhhhhhh
Q 017454 324 EIPENEYIKYFAPECSLRIP-NGHIVC--SFKEIDKFI 358 (371)
Q Consensus 324 ~~p~~~~~~~~~p~~~l~~~-~~~~~~--~~~~~~~~~ 358 (371)
++|.++|+++|+|||+|+++ ++||+| ++|.|++|+
T Consensus 322 ~~P~~~~~~~~~p~~~l~~~~~~~~~~~n~~~~l~~~~ 359 (376)
T 4a69_A 322 ELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIR 359 (376)
T ss_dssp BCCCCTTGGGGTTTCBSSCCCCCCSCCCCCHHHHHHHH
T ss_pred CCCCchHHHHhCCCcccCCCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999 899884 777776654
No 3
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=100.00 E-value=2.8e-107 Score=807.45 Aligned_cols=355 Identities=41% Similarity=0.795 Sum_probs=330.9
Q ss_pred CCCCCeEEEEEcccccCCCCCCCCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCccch
Q 017454 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQ 80 (371)
Q Consensus 1 ~~~~~~v~~~~~~~~~~~~~~~~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~~~ 80 (371)
|.+++||+|+||++++.| .++|||+|+|+++++++|+++|+.+++++++|++|+.++|++|||++||++|++.++...
T Consensus 10 ~~~~~~~~~~y~~~~~~~--~~~HPe~P~Rl~~i~~ll~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~ 87 (388)
T 3ew8_A 10 SGQSLVPVYIYSPEYVSM--CDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGD 87 (388)
T ss_dssp ----CCCEEECCHHHHHH--HTTCTTSTTHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHHC-
T ss_pred cCCCCcEEEEEChHHhcc--CCCCCCCcHHHHHHHHHHHHcCCcccCeEeCCCCCCHHHHHhhCCHHHHHHHHHhccccc
Confidence 357889999999999987 467999999999999999999999999999999999999999999999999998654322
Q ss_pred hhhHHhhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHcccccccccccCccCCccccCCCCccccchHHHHHHHHH
Q 017454 81 HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL 160 (371)
Q Consensus 81 ~~~~~~~~~~~~~~D~p~~~~~~~~a~~aaG~sl~Aa~~l~~g~~~~ai~~~gG~HHA~~~~a~GFC~~NnvAiAa~~l~ 160 (371)
. ...+..+++++.|||+++++|++|+++|||+|.|++++++|++++|+|||||+|||++++++|||+|||+||||++|+
T Consensus 88 ~-~~~~~~~~~lg~Dtp~~~~~~e~a~~aaGgsl~Aa~~v~~g~~~~Ai~~pGG~HHA~~~~a~GFC~~NdiaiAa~~l~ 166 (388)
T 3ew8_A 88 D-DHPDSIEYGLGYLCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLR 166 (388)
T ss_dssp --------CCSCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHT
T ss_pred c-cchhhhhccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHcCCCceeeecCCcccceeecCCCCchhhhHHHHHHHHHH
Confidence 1 123355788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcEEEEeccCCCChhhHHhhhcCCCEEEEecccCCCCCCCCCCCCccccCCCCcccEEeecCCCCCChHHHHHHHHH
Q 017454 161 KYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~~~~yPgtG~~~~~G~g~g~g~~vNvPL~~g~~D~~y~~~~~~ 240 (371)
+..+||||||||||||||||+|||+||+|||+|+|+++.+|||+||..+++|.|+|+||++|||||+|++|++|+.+|++
T Consensus 167 ~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~d~~y~~~~~~ 246 (388)
T 3ew8_A 167 RKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICES 246 (388)
T ss_dssp TTCSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHH
T ss_pred hcCCeEEEEecCCCCChhHHHHhccCCCEEEEecCCCCCCCCCCCCCcccccCCCCcceeeeccCCCCCCHHHHHHHHHH
Confidence 98999999999999999999999999999999999997779999999999999999999999999999999999999999
Q ss_pred HHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCCCcchHHHHHHHHHhhhhCCC
Q 017454 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 320 (371)
Q Consensus 241 ~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY~~~~~a~~~~~~~~~llg~~ 320 (371)
+|.|++++|+||+||||||||+|.+||||+|+||++||.+|+++|+++++|+++++||||++++++|||+++|++|+|++
T Consensus 247 ~l~p~~~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~~~p~l~~~gGGY~~~~var~w~~~~~~l~g~~ 326 (388)
T 3ew8_A 247 VLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKT 326 (388)
T ss_dssp HHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCEEEEECCccCCCCCCCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCCChhHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhhccCCCcccccCCCCcc--ccHhhhhhhh
Q 017454 321 LPNEIPENEYIKYFAPECSLRIPNGHIV--CSFKEIDKFI 358 (371)
Q Consensus 321 ~~~~~p~~~~~~~~~p~~~l~~~~~~~~--~~~~~~~~~~ 358 (371)
+|+++|+++||++|+|||+|+++++||+ |+++.|++|+
T Consensus 327 l~~~lP~~~~~~~~~p~~~l~~~~~~~~~~n~~~~l~~i~ 366 (388)
T 3ew8_A 327 LSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQIL 366 (388)
T ss_dssp CCSBCCCCTTGGGGTTTCBSCCCCCSCCCCCCHHHHHHHH
T ss_pred CCCCCCcccchhhcCCCccccCCcccCCCCCCHHHHHHHH
Confidence 9999999999999999999999999998 5888876664
No 4
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=100.00 E-value=1.8e-94 Score=717.27 Aligned_cols=320 Identities=34% Similarity=0.504 Sum_probs=301.8
Q ss_pred CeEEEEEcccccCCCCCCCCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCccchhhhH
Q 017454 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84 (371)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~~~~~~~ 84 (371)
++|+|+||++|..|.+++.|||+|+|+++++++|+++|+.+.+++++|++|+.++|++||+++||++|++.++.... ..
T Consensus 2 ~~t~~vy~~~~~~h~~g~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~at~~~l~~vH~~~Yv~~l~~~~~~~~~-~~ 80 (375)
T 1c3p_A 2 KKVKLIGTLDYGKYRYPKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCV-PK 80 (375)
T ss_dssp CCEEEEECGGGGGSCCCTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSC-CT
T ss_pred ceEEEEECHHHcCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCeEeCCCCCCHHHHHHhCCHHHHHHHHHhccccCC-Ch
Confidence 47999999999999999999999999999999999999999999999999999999999999999999886542110 01
Q ss_pred Hhhhhccc-CCCCCCChhHHHHHHHHHHHHHHHHHHHHcccccccccccCccCCccccCCCCccccchHHHHHHHHHHhC
Q 017454 85 QELTKYNL-GEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH 163 (371)
Q Consensus 85 ~~~~~~~~-~~D~p~~~~~~~~a~~aaG~sl~Aa~~l~~g~~~~ai~~~gG~HHA~~~~a~GFC~~NnvAiAa~~l~~~~ 163 (371)
+++.++++ +.|||+++++|++|+++|||++.|++++++|+ +|+|||||+|||++++++|||+|||+||||++|+++.
T Consensus 81 ~~~~~~~l~~~dtp~~~~~~~~a~~aaGg~l~aa~~v~~g~--~a~~ppGG~HHA~~~~a~GFC~fNnvAiAa~~l~~~g 158 (375)
T 1c3p_A 81 GAREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGN--VAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKKG 158 (375)
T ss_dssp THHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTC--EEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHTT
T ss_pred HHhhccccCCCCcccChhHHHHHHHHhhHHHHHHHHHHcCC--ceeecCcccceeeeccCCCceeecHHHHHHHHHHHhC
Confidence 22355777 68999999999999999999999999999997 7999999999999999999999999999999999886
Q ss_pred -CcEEEEeccCCCChhhHHhhhcCCCEEEEecccCCCCCCCCCCCCcccc-CCCCcccEEeecCCCCCChHHHHHHHHHH
Q 017454 164 -ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG-EREGKFYAINVPLKDGIDDTSFTRLFKTI 241 (371)
Q Consensus 164 -~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~~~~yPgtG~~~~~G-~g~g~g~~vNvPL~~g~~D~~y~~~~~~~ 241 (371)
+||+|||||||||||||+|||+||+|||+|+|+++..|||+||..+++| .|+|+|+++|||||+|++|++|+.+|+++
T Consensus 159 ~~RV~IvD~DvHHGnGtq~iF~~dp~Vl~~SiH~~~~~ffPgtG~~~e~G~~g~g~g~~vNvPL~~g~~D~~yl~a~~~~ 238 (375)
T 1c3p_A 159 FKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKS 238 (375)
T ss_dssp CCCEEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHH
T ss_pred CCeEEEEecCCCCCHHHHHHhccCCCEEEEecccCCCCCCCCCCCccccCCcCCCCceEEEEeCCCCCCHHHHHHHHHHH
Confidence 7999999999999999999999999999999999877899999999999 99999999999999999999999999999
Q ss_pred HHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCCCcchHHHHHHHHHhhhhCCCC
Q 017454 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTEL 321 (371)
Q Consensus 242 l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY~~~~~a~~~~~~~~~llg~~~ 321 (371)
|.|++++|+||+||||||||+|.+||||+|+||+++|.+++++++++..|++++|||||++.++++||++++++|+|+++
T Consensus 239 l~p~l~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~a~~vv~vleGGY~~~~l~~~~~~~~~~l~g~~~ 318 (375)
T 1c3p_A 239 LEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVFGEGVYLGGGGYHPYALARAWTLIWCELSGREV 318 (375)
T ss_dssp HHHHHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHHCSCEEECCCCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHhCCCEEEEECCccccCCCCCCCcccCHHHHHHHHHHHHHhccceEEEECCCCChHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 017454 322 PNEIPE 327 (371)
Q Consensus 322 ~~~~p~ 327 (371)
|+.+|+
T Consensus 319 ~~~lp~ 324 (375)
T 1c3p_A 319 PEKLNN 324 (375)
T ss_dssp CSSCCH
T ss_pred CccCCH
Confidence 999996
No 5
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=100.00 E-value=1.1e-90 Score=688.66 Aligned_cols=315 Identities=25% Similarity=0.371 Sum_probs=295.9
Q ss_pred eEEEEEcccccCCCCCCC----------------CCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHH
Q 017454 6 KISYFYDGDVGSVYFGPN----------------HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYV 69 (371)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~----------------hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv 69 (371)
+|+++|||+|..|.+++. |||+|+|+++++++|++.|+.+++++++|++|+.++|++||+++||
T Consensus 2 ~t~~~y~~~~~~h~~~~~~~~~~~~g~~~~~~~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~~~l~~vH~~~Yv 81 (369)
T 1zz1_A 2 AIGYVWNTLYGWVDTGTGSLAAANLTARMQPISHHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSAAHL 81 (369)
T ss_dssp CEEEECCGGGGGCCCCSSSSSCCBTTTTBCCCSSCTTCTHHHHHHHHHHHHTTGGGGSEECCCCCCCHHHHHTTSCHHHH
T ss_pred eEEEEEchHHcccCCCCcccccccccccccccCCCCCCHHHHHHHHHHHHhcCCCccceEeCCCcCCHHHHHHhccHHHH
Confidence 699999999999999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCc-cchhhhHHhhhhcccCC-CCCCChhHHHHHHHHHHHHHHHHHHHHccccc--ccccccCccCCccccCCCC
Q 017454 70 EFLHRITP-DTQHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNNQLCD--IAINWAGGLHHAKKCEASG 145 (371)
Q Consensus 70 ~~l~~~~~-~~~~~~~~~~~~~~~~~-D~p~~~~~~~~a~~aaG~sl~Aa~~l~~g~~~--~ai~~~gG~HHA~~~~a~G 145 (371)
++|++.++ . ..+.++. |||++++++++|++++|+++.|++++++|+++ +|++|||| |||++++++|
T Consensus 82 ~~l~~~~~~~---------~~~~l~~~dtp~~~~~~~~a~~aaG~~l~aa~~v~~g~~~~afa~~rppG-HHA~~~~a~G 151 (369)
T 1zz1_A 82 ENMKRVSNLP---------TGGDTGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPG-HHAPHNAAMG 151 (369)
T ss_dssp HHHHHHHHST---------TCEECSSSSCEECTTTHHHHHHHHHHHHHHHHHHHTTSCSEEEECCSSCC-TTCCTTCCBT
T ss_pred HHHHHhCccc---------cceecCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEecCCc-cCcCCCCCCC
Confidence 99998653 2 1234677 99999999999999999999999999999865 46789988 9999999999
Q ss_pred ccccchHHHHHHHHHHhC--CcEEEEeccCCCChhhHHhhhcCCCEEEEecccCCCCCCC-CCCCCccccCCCCcccEEe
Q 017454 146 FCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP-GTGDVKEIGEREGKFYAIN 222 (371)
Q Consensus 146 FC~~NnvAiAa~~l~~~~--~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~~~~yP-gtG~~~~~G~g~g~g~~vN 222 (371)
||+|||+||||++|++++ +||+|||||||||||||+|||+||+|+|+|+|++ +||| +||..+++|.|+|+|+++|
T Consensus 152 FC~fNnvAiAa~~l~~~~g~~RV~IvD~DvHHGnGTq~iF~~d~~Vl~~SiH~~--~~yP~~tG~~~e~G~g~g~g~~vN 229 (369)
T 1zz1_A 152 FCIFNNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH--LCFPPDSGYSTERGAGNGHGYNIN 229 (369)
T ss_dssp TBSSCHHHHHHHHHHHTSCCSCEEEEECSSSCCHHHHHHTTTCTTEEEEEEEET--TSSSTTCCCTTCCCCGGGTTCEEE
T ss_pred chHhhHHHHHHHHHHHhcCCCeEEEEecCCCCchhhhHHhcCCCCEEEEeccCC--CCCCCCCCcccccCCCCCCceEEe
Confidence 999999999999999874 8999999999999999999999999999999999 6999 9999999999999999999
Q ss_pred ecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhc-----CCCEEEEeC
Q 017454 223 VPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGG 297 (371)
Q Consensus 223 vPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~-----~~p~~~~le 297 (371)
||||+|++|++|+.+|++++.|++++|+||+||||||||+|.+||||+|+||+++|.++++.|+++ ++|++++||
T Consensus 230 vPL~~g~~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~a~~~~~g~vv~vle 309 (369)
T 1zz1_A 230 VPLPPGSGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQE 309 (369)
T ss_dssp EEECTTCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCTTCCCBBCHHHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred eecCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccCCCCCCCCCcccCHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999998763 799999999
Q ss_pred CCCCcchHHHHHHHHHhhhhCCCCCCCCCCchhhhc
Q 017454 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKY 333 (371)
Q Consensus 298 GGY~~~~~a~~~~~~~~~llg~~~~~~~p~~~~~~~ 333 (371)
|||+++++++||++++++|+|.++ ...|..++++.
T Consensus 310 GGY~~~~l~~~~~~~~~~l~g~~~-~~~p~~~~~~~ 344 (369)
T 1zz1_A 310 GGYSPHYLPFCGLAVIEELTGVRS-LPDPYHEFLAG 344 (369)
T ss_dssp CCCCTTTHHHHHHHHHHHHHCCCC-CCCTTHHHHHT
T ss_pred CCCCccHHHHHHHHHHHHHhCCCC-CCCchhHHHhh
Confidence 999999999999999999999887 66677777653
No 6
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=100.00 E-value=1.9e-88 Score=663.79 Aligned_cols=306 Identities=20% Similarity=0.289 Sum_probs=281.3
Q ss_pred EEEEcccccCCCCCC--------CCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCccc
Q 017454 8 SYFYDGDVGSVYFGP--------NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDT 79 (371)
Q Consensus 8 ~~~~~~~~~~~~~~~--------~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~~ 79 (371)
-++|||++..|..+. .|||+|+|+++|+++|+++|+. ++++|++|++++|++|||++||++|++.++++
T Consensus 2 ~~v~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl~---~~~~p~~at~e~L~~vHs~~Yi~~l~~~~~~~ 78 (341)
T 3q9b_A 2 RVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFD---DVVAPARHGLETVLKVHDAGYLNFLETAWDRW 78 (341)
T ss_dssp EEECCGGGGGCCCSCEEETTEEECCSSCTHHHHHHHHHHHHTTCC---CEECCCCCCSTTGGGTSCHHHHHHHHHHHHHH
T ss_pred EEEECcHHhccCCcccccCCCcCCCCCChHHHHHHHHHHHhCCCC---ceeCCCCCCHHHHHHhCCHHHHHHHHHhhhhh
Confidence 368999999998875 6999999999999999999975 58899999999999999999999999864321
Q ss_pred hh-----------------------hhHHhhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHccc-ccccccccCcc
Q 017454 80 QH-----------------------LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL-CDIAINWAGGL 135 (371)
Q Consensus 80 ~~-----------------------~~~~~~~~~~~~~D~p~~~~~~~~a~~aaG~sl~Aa~~l~~g~-~~~ai~~~gG~ 135 (371)
.. .+..+...+.++.|||+++++|++|+++||+++.|++++++|+ ..+|++||||
T Consensus 79 ~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~g~~~~d~dt~~~~~~~~aa~~aaG~~l~a~~~v~~g~~~afal~rppG- 157 (341)
T 3q9b_A 79 KAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPG- 157 (341)
T ss_dssp HHTTCSSCBCCCBCCCTTCCCCCCSSHHHHHHHTBSBTTCCBCTTHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSCC-
T ss_pred hhcccccccccccccccccccccccchhcccceeccCCCCCcChhHHHHHHHHHHHHHHHHHHHHhCCCceEecCCCCC-
Confidence 10 0112344577899999999999999999999999999999986 4578899988
Q ss_pred CCccccCCCCccccchHHHHHHHHHHh-CCcEEEEeccCCCChhhHHhhhcCCCEEEEecccCCCCCCCC-CCCCccccC
Q 017454 136 HHAKKCEASGFCYINDLVLGILELLKY-HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG-TGDVKEIGE 213 (371)
Q Consensus 136 HHA~~~~a~GFC~~NnvAiAa~~l~~~-~~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~~~~yPg-tG~~~~~G~ 213 (371)
|||++++++|||+|||+||||++|+++ .+||+|||||||||||||+|||+||+|||+|+|+++..|||+ ||..+++|.
T Consensus 158 HHA~~~~a~GFC~~NnvaiAa~~l~~~g~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~G~ 237 (341)
T 3q9b_A 158 HHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGK 237 (341)
T ss_dssp TTCBTTBBBTTBSSCHHHHHHHHHHHTTCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGSTTCSSCCTTCCCC
T ss_pred CCCCCCCCCCccccCHHHHHHHHHHHcCCCeEEEEecCCCCCcchhHHhcCCCCEEEEeccCCCccCCCCCCCcccccCC
Confidence 999999999999999999999999998 599999999999999999999999999999999997679999 999999999
Q ss_pred CCCcccEEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEE
Q 017454 214 REGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLL 293 (371)
Q Consensus 214 g~g~g~~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~ 293 (371)
|+|+|+++|||||+|++|++|+.+|++++ |.+++|+||+||||||||+|.+||||+|+||+++|.+++++++++++|++
T Consensus 238 g~g~g~~vNvpL~~g~~d~~y~~~~~~~l-~~l~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~~~~~~~v 316 (341)
T 3q9b_A 238 GAGAGTTANYPMGRGTPYSVWGEALTDSL-KRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLL 316 (341)
T ss_dssp GGGTTCEEEEEECTTCBHHHHHHHHHHHH-HHHHHHTCSCEEEEECCTTBTTCTTCCCBBCTTHHHHHHHHHHTTSSCEE
T ss_pred CCCCceeEeeecCCCCChHHHHHHHHHHH-HHHHhhCCCEEEEeCCccccCCCCCCCccCCHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999976 57899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCcchHHHHHHHHHhhhhC
Q 017454 294 VTGGGGYTKENVARCWTVETGILLD 318 (371)
Q Consensus 294 ~~leGGY~~~~~a~~~~~~~~~llg 318 (371)
++|||||+++++++|+.+++..+.|
T Consensus 317 ~vleGGY~~~~l~~~~~~~l~g~~~ 341 (341)
T 3q9b_A 317 VVMEGGYGVPEIGLNVANVLKGVAG 341 (341)
T ss_dssp EEECCCCCCTTHHHHHHHHHHHHHC
T ss_pred EEECCCCChHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988754
No 7
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=5.9e-88 Score=663.80 Aligned_cols=305 Identities=24% Similarity=0.380 Sum_probs=282.0
Q ss_pred EEEEcccccCCCCCC--------CCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCccc
Q 017454 8 SYFYDGDVGSVYFGP--------NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDT 79 (371)
Q Consensus 8 ~~~~~~~~~~~~~~~--------~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~~ 79 (371)
.++|||++..|..+. .|||+|+|+++|+++|+++|+ ++++|++|+.++|++|||++||++|++.++++
T Consensus 23 ~~~~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl----~~~~p~~At~e~L~~vHs~~YI~~l~~~~~~~ 98 (362)
T 3men_A 23 LTYFHPDQSLHHPRTYFSRGRMRMPQEVPERAARLVAAAFAMGF----PVREPDDFGIAPIAAVHDTHYLRFLETVHREW 98 (362)
T ss_dssp EEECCGGGGGCCCCCEEETTEEECCCSCTHHHHHHHHHHHHTTC----CEECCCCCCSHHHHTTSCHHHHHHHHHHHHHH
T ss_pred EEEEChHHHhhCCccccccCCcCCCCCChHHHHHHHHHHHhCCC----eEeCCCCCCHHHHHHhCCHHHHHHHHHhhhhh
Confidence 589999999999875 699999999999999999996 78999999999999999999999998764321
Q ss_pred hh----------------------hhHHhhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHccc-ccccccccCccC
Q 017454 80 QH----------------------LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL-CDIAINWAGGLH 136 (371)
Q Consensus 80 ~~----------------------~~~~~~~~~~~~~D~p~~~~~~~~a~~aaG~sl~Aa~~l~~g~-~~~ai~~~gG~H 136 (371)
.. ....+...+.++.|||+++++|++|++++|+++.|+++|++|+ ..+|++|||| |
T Consensus 99 ~~~~~~~~~e~~p~~~p~~~~~p~~~~~~~g~~~~d~Dtpv~~~~~~aa~~aaG~~l~aa~~v~~g~~~afal~rPpG-H 177 (362)
T 3men_A 99 KAMPEDWGDEAMSNIFVREPNALRGVLAQAARHLADGSCPVGEHTWRAAYWSAQSALAAAAAVRDGAPAAYALCRPPG-H 177 (362)
T ss_dssp HTSCGGGCSSBCCCBCCCSSCCCCSHHHHHHHHBCBTTCCBCTTHHHHHHHHHHHHHHHHHHHHTTCSEEEECCSSCC-T
T ss_pred hhcccccccccccccccccccccccccccccccccCCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCceEEeCCCCC-C
Confidence 10 0111233467889999999999999999999999999999986 5578899987 9
Q ss_pred CccccCCCCccccchHHHHHHHHHHhCCcEEEEeccCCCChhhHHhhhcCCCEEEEecccCCCCCCCC-CCCCccccCCC
Q 017454 137 HAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG-TGDVKEIGERE 215 (371)
Q Consensus 137 HA~~~~a~GFC~~NnvAiAa~~l~~~~~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~~~~yPg-tG~~~~~G~g~ 215 (371)
||++++++|||+|||+||||++|+++.+||+|||||||||||||+|||+||+|||+|+|+++..|||+ ||..+++|.|+
T Consensus 178 HA~~~~a~GFC~fNnvAiAa~~l~~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~G~g~ 257 (362)
T 3men_A 178 HARVDAAGGFCYLNNAAIAAQALRARHARVAVLDTDMHHGQGIQEIFYARRDVLYVSIHGDPTNFYPAVAGFDDERGAGE 257 (362)
T ss_dssp TCBTTBBBTTBSSCHHHHHHHHHTTTCSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTSTTCSSCCTTCCCSGG
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHcCCeEEEEeCcCCCchhHhHHhcCCCCEEEEEecCCCccCCCCCCCccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999997779999 99999999999
Q ss_pred CcccEEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEE
Q 017454 216 GKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295 (371)
Q Consensus 216 g~g~~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~ 295 (371)
|+|+++|||||+|++|++|+.+|++++ |++++|+||+||||||||+|.+||||+|+||+++|.++++.++++++|++++
T Consensus 258 g~g~~vNvPL~~g~~d~~yl~~~~~~l-~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~~~~~~~~~l~~~~~~~v~v 336 (362)
T 3men_A 258 GLGYNVNLPMPHGSSEAAFFERVDDAL-RELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIGALRLPTVIV 336 (362)
T ss_dssp GTTSEEEEEECTTBCHHHHHHHHHHHH-HHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCceeEeeccCCCCChHHHHHHHHHHH-HHHHhcCCCEEEEECcccCcCCCCCCCccCCHHHHHHHHHHHHhhCCCEEEE
Confidence 999999999999999999999999976 6789999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcchHHHHHHHHHhhhhC
Q 017454 296 GGGGYTKENVARCWTVETGILLD 318 (371)
Q Consensus 296 leGGY~~~~~a~~~~~~~~~llg 318 (371)
|||||+++++++|+.++++.|.+
T Consensus 337 leGGY~~~~l~~~~~a~l~~l~~ 359 (362)
T 3men_A 337 QEGGYHIESLEANARSFFGGFGA 359 (362)
T ss_dssp ECCCCCHHHHHHHHHHHHHHHTC
T ss_pred ECCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999876
No 8
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=100.00 E-value=2e-86 Score=662.11 Aligned_cols=316 Identities=22% Similarity=0.362 Sum_probs=282.5
Q ss_pred CeEEEEEcccccCCC----CCCCCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCccc-
Q 017454 5 DKISYFYDGDVGSVY----FGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDT- 79 (371)
Q Consensus 5 ~~v~~~~~~~~~~~~----~~~~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~~- 79 (371)
.+|+++||++|+.|. .++.|||+|+|+++|+++|+++||.+++++++|++||+|||++|||++||+.+.......
T Consensus 36 ~~t~~vyd~~~l~H~~~~~~~~~HPE~P~Rl~~i~~~L~~~Gl~~~~~~~~p~~At~eeL~~vHs~~YI~~~~~~~l~~~ 115 (421)
T 2pqp_A 36 FTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRL 115 (421)
T ss_dssp TCEEEECCGGGGGCCCTTCCTTSCSSCTHHHHHHHHHHHHTTCGGGSEEECCCCCCHHHHTTTSCHHHHHHHHCCTTCSC
T ss_pred CeEEEEECHHHHhhccCCCCCCCCCCCcHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhcCCHHHHHhhhcchhhhh
Confidence 479999999999998 678999999999999999999999999999999999999999999999998653311000
Q ss_pred ---hhhhHH----hh------hhcccCCCCCCCh-hHHHHHHHHHHHHHHHHHHHHccccc--ccccccCccCCccccCC
Q 017454 80 ---QHLFRQ----EL------TKYNLGEDCPVFE-NLFEFCQIYAGGTIDAARRLNNQLCD--IAINWAGGLHHAKKCEA 143 (371)
Q Consensus 80 ---~~~~~~----~~------~~~~~~~D~p~~~-~~~~~a~~aaG~sl~Aa~~l~~g~~~--~ai~~~gG~HHA~~~~a 143 (371)
...... .. ...+++.|+++++ .+|++|++++|+++.|++++++|+++ +|++|||| |||+++++
T Consensus 116 ~~~~~~~~g~~~~~~~~~~p~gg~~~D~Dt~~~~~~s~~aa~~aaG~~~~a~~~v~~g~~~~afa~~rPpG-HHA~~~~a 194 (421)
T 2pqp_A 116 KLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPG-HHADHSTA 194 (421)
T ss_dssp CCCHHHHHHHHSCCCCEECTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCSSCC-TTCBTTBC
T ss_pred hhhcccccccchhhhhhhccccCcCCCCCcccCCccHHHHHHHHHhHHHHHHHHHHcCccccceeeCCCCC-CCCCCCCC
Confidence 000000 00 0123567888874 89999999999999999999999865 66788887 99999999
Q ss_pred CCccccchHHHHHHHHHHhC--CcEEEEeccCCCChhhHHhhhcCCCEEEEecccCC-CCCCCCCCCCccccCCCCcccE
Q 017454 144 SGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGEREGKFYA 220 (371)
Q Consensus 144 ~GFC~~NnvAiAa~~l~~~~--~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~-~~~yPgtG~~~~~G~g~g~g~~ 220 (371)
+|||+||||||||++|++++ +||+|||||||||||||+|||+||+|||+|+|+++ .+|||+||..+++|.|+|+||+
T Consensus 195 ~GFC~fNnvAiAa~~l~~~~~~~RV~ivD~DvHHGnGtq~iF~~dp~Vl~~S~H~~~~g~~yPgtG~~~e~G~g~g~g~~ 274 (421)
T 2pqp_A 195 MGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFN 274 (421)
T ss_dssp BTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGTSTTCCCCTTCCCCGGGTTCE
T ss_pred CcchhhCHHHHHHHHHHHhcCCCeEEEEecCCCCChhHHHHhcCCCCEEEEecccCCCCCCCCCCCChhhccCCCCccce
Confidence 99999999999999999864 89999999999999999999999999999999984 3499999999999999999999
Q ss_pred EeecCCC----CCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCC--CCCccccCHHHHHHHHHHHHhc-CCCEE
Q 017454 221 INVPLKD----GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD--RLGCFNLSIDGHAECVRFVKKF-NLPLL 293 (371)
Q Consensus 221 vNvPL~~----g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~D--plg~~~ls~~g~~~~~~~l~~~-~~p~~ 293 (371)
+|||||. |++|++|+.+|+++|.|++++|+||+||||||||+|.+| |||+|+||+++|.++++.|+++ ++|++
T Consensus 275 vNvPl~~gl~~g~~d~~yl~~~~~~l~p~~~~F~PdlIvvsaG~Da~~gD~dpLg~~~lt~~~y~~~~~~l~~~a~grvv 354 (421)
T 2pqp_A 275 VNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVV 354 (421)
T ss_dssp EEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSGGGCEE
T ss_pred eccccCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCcccccccccccCCceeCHHHHHHHHHHHHHHcCCCEE
Confidence 9999975 479999999999999999999999999999999999987 9999999999999999999987 88999
Q ss_pred EEeCCCCCcchHHHHHHHHHhhhhCCCC
Q 017454 294 VTGGGGYTKENVARCWTVETGILLDTEL 321 (371)
Q Consensus 294 ~~leGGY~~~~~a~~~~~~~~~llg~~~ 321 (371)
++|||||+++++++||.+++++|+|.+.
T Consensus 355 ~vlEGGY~l~~l~~~~~a~~~~L~g~~~ 382 (421)
T 2pqp_A 355 LALEGGHDLTAICDASEACVAALLGNRV 382 (421)
T ss_dssp EEECSCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred EEECCCCChHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999764
No 9
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=100.00 E-value=1.5e-86 Score=668.01 Aligned_cols=319 Identities=22% Similarity=0.353 Sum_probs=279.9
Q ss_pred CCCeEEEEEcccccCCCCC----CCCCCCchHHHHHHHHHHhCCCCCCceEeCCCCCCHHHHhccCcHHHHHHHHhcCcc
Q 017454 3 SKDKISYFYDGDVGSVYFG----PNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD 78 (371)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~----~~hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~e~L~~vHs~~Yv~~l~~~~~~ 78 (371)
++.+|+++||++|+.|..+ ..|||+|+|+++|+++|++.||.+++++++|++||.++|++|||++||+.++.....
T Consensus 6 p~~~Tg~vyd~~~l~H~~~~g~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~eeL~~vHs~~Yv~~~~~~~~~ 85 (413)
T 2vqm_A 6 PRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLN 85 (413)
T ss_dssp CCSSEEEECCGGGCSCCCTTC-------CCCHHHHHHHHHHHHTHHHHSEEECCCCCCHHHHTTTSCHHHHHHHHSCGGG
T ss_pred CCCeEEEEEcHHHhccCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCeEeCCCCCCHHHHHHhCCHHHHHHHhcCchh
Confidence 4468999999999999865 459999999999999999999999999999999999999999999999888653221
Q ss_pred chh----hhH----Hh-----hhhcccCCCCCCCh-hHHHHHHHHHHHHHHHHHHHHccccccc--ccccCccCCccccC
Q 017454 79 TQH----LFR----QE-----LTKYNLGEDCPVFE-NLFEFCQIYAGGTIDAARRLNNQLCDIA--INWAGGLHHAKKCE 142 (371)
Q Consensus 79 ~~~----~~~----~~-----~~~~~~~~D~p~~~-~~~~~a~~aaG~sl~Aa~~l~~g~~~~a--i~~~gG~HHA~~~~ 142 (371)
... ... .. .....++.|++++. .++++|++++|+++.|++++++|+++.| +++||| |||++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~aA~laaG~~l~a~~~v~~g~~~~afa~vrppG-HHA~~~~ 164 (413)
T 2vqm_A 86 RQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPG-HHAEEST 164 (413)
T ss_dssp GCC----HHHHHHHHHEEECTTSCEEECTTSTHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCCSCC-TTCBTTB
T ss_pred hhHhhhhhhccchhhhhhccccCCcCccCCccccchhHHHHHHHHHHHHHHHHHHHhcCCccceeeeccccc-ccCcCCC
Confidence 110 000 00 11234566777665 7899999999999999999999987755 566766 9999999
Q ss_pred CCCccccchHHHHHHHHHHhC--CcEEEEeccCCCChhhHHhhhcCCCEEEEecccCC-CCCCCCCCCCccccCCCCccc
Q 017454 143 ASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGEREGKFY 219 (371)
Q Consensus 143 a~GFC~~NnvAiAa~~l~~~~--~RVlivD~DvHHGnGtq~~f~~d~~Vl~~SiH~~~-~~~yPgtG~~~~~G~g~g~g~ 219 (371)
++|||+|||+||||++|++++ +||||||||||||||||+|||+||+|+|+|+|+++ .+|||+||..+|+|.|+|+|+
T Consensus 165 a~GFC~~Nnvaiaa~~~~~~~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~f~pgtG~~~e~G~g~g~g~ 244 (413)
T 2vqm_A 165 PMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGF 244 (413)
T ss_dssp CBTTBSSCHHHHHHHHHHHHSCCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGCSTTCCCCTTCCCSGGGTTC
T ss_pred CCCccccchHHHHHHHHHHhcCCCeEEEEecccCCCccHHHHHhcCcccccccchhccCCCCCCCCCCHHHcCCCccccc
Confidence 999999999999999999875 89999999999999999999999999999999984 359999999999999999999
Q ss_pred EEeecCC----CCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCC--CCCCccccCHHHHHHHHHHHHhc-CCCE
Q 017454 220 AINVPLK----DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG--DRLGCFNLSIDGHAECVRFVKKF-NLPL 292 (371)
Q Consensus 220 ~vNvPL~----~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~--Dplg~~~ls~~g~~~~~~~l~~~-~~p~ 292 (371)
++|+||+ ++++|++|+.+|+++|.|++++|+||+||||||||+|++ ||||+++||+++|.+++++|+++ ++|+
T Consensus 245 ~~n~pl~~g~~~~~~D~~y~~~~~~~v~p~~~~f~PdlivvsaG~Da~~~d~D~lg~~~lt~~~~~~~~~~l~~~a~~~~ 324 (413)
T 2vqm_A 245 NVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRI 324 (413)
T ss_dssp EEEEEECSCSSSCCCHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBSSCTTTTCCCCBCHHHHHHHHHHHHTSGGGCE
T ss_pred ccccccccccCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcCCCCCCCCCcccCHHHHHHHHHHHHHhcCCCE
Confidence 9999987 458899999999999999999999999999999999999 66999999999999999999997 8999
Q ss_pred EEEeCCCCCcchHHHHHHHHHhhhhCCCCC
Q 017454 293 LVTGGGGYTKENVARCWTVETGILLDTELP 322 (371)
Q Consensus 293 ~~~leGGY~~~~~a~~~~~~~~~llg~~~~ 322 (371)
+++|||||+++++++||++++++|+|.+++
T Consensus 325 v~vleGGY~~~~l~~~~~~~~~~l~g~~~~ 354 (413)
T 2vqm_A 325 VLALEGGHDLTAICDASEACVSALLGNELD 354 (413)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred EEEeCcCCChHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999998764
No 10
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=79.11 E-value=1.9 Score=37.51 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=40.3
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCC-CCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEE
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA-DSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVT 295 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~-D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~ 295 (371)
.+|..+. |.+-...+..|++. +..++||+|++..|. |...+.+.....-..+.+..+++.+++.+.+++++
T Consensus 53 viN~Gi~-G~tt~~~l~r~~~~----v~~~~Pd~vvi~~G~ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~ 124 (209)
T 4hf7_A 53 YIGRGIS-GQTSYQFLLRFRED----VINLSPALVVINAGTNDVAENTGAYNEDYTFGNIASMAELAKANKIKVILT 124 (209)
T ss_dssp EEEEECT-TCCHHHHHHHHHHH----TGGGCCSEEEECCCHHHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeccC-cccHHHHHHHHHHH----HHhcCCCEEEEEeCCCcCccccccccHHHHHHHHHHhhHHHhccCceEEEE
Confidence 3566553 33334455555443 335799999999997 44433332222223344566677777767666654
No 11
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=63.36 E-value=21 Score=30.10 Aligned_cols=58 Identities=10% Similarity=0.251 Sum_probs=36.1
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHH----HHHHHHHhcC
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA----ECVRFVKKFN 289 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~----~~~~~l~~~~ 289 (371)
..|.....+.+....++.+++ .+...+||+|++..|.. | +..+.+.|. ++++.+++.+
T Consensus 48 v~~~~~~~~~~~~~~~~~~~~----~~~~~~pd~Vvi~~G~N----D----~~~~~~~~~~~l~~ii~~l~~~~ 109 (200)
T 4h08_A 48 VGRLSNSKSVGDPALIEELAV----VLKNTKFDVIHFNNGLH----G----FDYTEEEYDKSFPKLIKIIRKYA 109 (200)
T ss_dssp EEEEEESCCTTCHHHHHHHHH----HHHHSCCSEEEECCCSS----C----TTSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeccCCccHHHHHHHHHH----HHhcCCCCeEEEEeeeC----C----CCCCHHHHHHHHHHHHHHHhhhC
Confidence 345555555666666665554 34568999999999964 3 235666654 4555555554
No 12
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=62.62 E-value=5.3 Score=31.27 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=45.4
Q ss_pred HHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccC-----HHHHHHHHHHHHhcCCCEEEE
Q 017454 239 KTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS-----IDGHAECVRFVKKFNLPLLVT 295 (371)
Q Consensus 239 ~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls-----~~g~~~~~~~l~~~~~p~~~~ 295 (371)
++++..+.++|+.++=+++++.|...+.|+|.|-+. .+...+..++|++.+..+=.+
T Consensus 34 ~PvIs~l~~~~~v~vnIL~g~I~~i~~~~~G~L~v~l~G~~~~~~~~ai~~L~~~~v~vEvl 95 (98)
T 3ced_A 34 EPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVKMEVL 95 (98)
T ss_dssp HHHHHHHHHHHTCCCEEEEEEEEEETTEEEEEEEEEESCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred chHHHHHHHHHCCcEEEEEEEeEEeCCEeEEEEEEEEeCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 467778888999999999999999999999998773 344667778888877654333
No 13
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=59.63 E-value=9.2 Score=31.70 Aligned_cols=64 Identities=20% Similarity=0.342 Sum_probs=36.8
Q ss_pred EeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHH----HHHHHHHHHhcCCCEEEE
Q 017454 221 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG----HAECVRFVKKFNLPLLVT 295 (371)
Q Consensus 221 vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g----~~~~~~~l~~~~~p~~~~ 295 (371)
+|...+ |.+-.+.+..++. .+..++||+|+++.|.. |-.. ..+.+. +.++++.+++.+.+++++
T Consensus 42 ~n~g~~-G~~~~~~~~~~~~----~~~~~~pd~vvi~~G~N----D~~~--~~~~~~~~~~~~~~i~~~~~~~~~vvl~ 109 (185)
T 3hp4_A 42 INASIS-GETSGGALRRLDA----LLEQYEPTHVLIELGAN----DGLR--GFPVKKMQTNLTALVKKSQAANAMTALM 109 (185)
T ss_dssp EECCCT-TCCHHHHHHHHHH----HHHHHCCSEEEEECCHH----HHHT--TCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EECCcC-CccHHHHHHHHHH----HHhhcCCCEEEEEeecc----cCCC--CcCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 444443 3344455555544 44568999999999962 2111 234444 445666677777666655
No 14
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=58.31 E-value=21 Score=30.68 Aligned_cols=69 Identities=14% Similarity=0.263 Sum_probs=39.5
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhh-cCCcEEEEecCC-CCCCCCCCCccccCHHHHH----HHHHHHHhcCCCEE
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVET-YAPGAIVLQCGA-DSLAGDRLGCFNLSIDGHA----ECVRFVKKFNLPLL 293 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~-f~Pd~IvvsaG~-D~~~~Dplg~~~ls~~g~~----~~~~~l~~~~~p~~ 293 (371)
.+|..+. |.+-...+..++++ +.. .+||+|+|+.|. |.... +.-..+.+.|. ++++.+++.+.+++
T Consensus 46 v~n~g~~-G~~~~~~~~~~~~~----~~~~~~pd~vvi~~G~ND~~~~---~~~~~~~~~~~~~l~~~i~~~~~~~~~vi 117 (240)
T 3mil_A 46 ILQRGFK-GYTSRWALKILPEI----LKHESNIVMATIFLGANDACSA---GPQSVPLPEFIDNIRQMVSLMKSYHIRPI 117 (240)
T ss_dssp EEEEECT-TCCHHHHHHHHHHH----HHHCCCEEEEEEECCTTTTSSS---STTCCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEecCcC-cccHHHHHHHHHHH----hcccCCCCEEEEEeecCcCCcc---CCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3555553 33445555555543 333 799999999997 44321 12234555444 45666677676666
Q ss_pred EEe
Q 017454 294 VTG 296 (371)
Q Consensus 294 ~~l 296 (371)
++.
T Consensus 118 l~~ 120 (240)
T 3mil_A 118 IIG 120 (240)
T ss_dssp EEC
T ss_pred EEc
Confidence 654
No 15
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=54.65 E-value=11 Score=31.53 Aligned_cols=69 Identities=12% Similarity=0.211 Sum_probs=37.7
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHH----HHHHHHHhcCCCEEEE
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA----ECVRFVKKFNLPLLVT 295 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~----~~~~~l~~~~~p~~~~ 295 (371)
.+|..++. .+-...+..+++ .+..++||+|+|+.|..=.... .-..+.+.|. ++++.+++.+.+++++
T Consensus 49 v~n~g~~G-~~~~~~~~~~~~----~~~~~~pd~vvi~~G~ND~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~vil~ 120 (204)
T 3p94_A 49 FVDRGISG-QTTSEMLVRFRQ----DVINLKPKAVVILAGINDIAHN---NGVIALENVFGNLVSMAELAKANHIKVIFC 120 (204)
T ss_dssp EEEEECTT-CCHHHHHHHHHH----HTGGGCEEEEEEECCHHHHTTT---TSCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eEEcccCc-ccHHHHHHHHHH----HHHhCCCCEEEEEeecCccccc---cCCCCHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 35665533 334445544433 3445889999999996322211 1114555444 4566666656666665
Q ss_pred e
Q 017454 296 G 296 (371)
Q Consensus 296 l 296 (371)
.
T Consensus 121 ~ 121 (204)
T 3p94_A 121 S 121 (204)
T ss_dssp C
T ss_pred e
Confidence 3
No 16
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=48.79 E-value=29 Score=28.83 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=36.9
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHH----HHHHHHHHHhcCCCEEEE
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG----HAECVRFVKKFNLPLLVT 295 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g----~~~~~~~l~~~~~p~~~~ 295 (371)
.+|..+. |.+-...+..++ ..+...+||+|+|+.|.. |-.. ..+.+. +.++++.+++.+.+++++
T Consensus 37 v~n~g~~-G~~~~~~~~~~~----~~~~~~~pd~Vii~~G~N----D~~~--~~~~~~~~~~l~~li~~~~~~~~~vil~ 105 (190)
T 1ivn_A 37 VVNASIS-GDTSQQGLARLP----ALLKQHQPRWVLVELGGN----DGLR--GFQPQQTEQTLRQILQDVKAANAEPLLM 105 (190)
T ss_dssp EEECCCT-TCCHHHHHHHHH----HHHHHHCCSEEEEECCTT----TTSS--SCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecCCC-CchHHHHHHHHH----HHHHhcCCCEEEEEeecc----cccc--CCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3454443 223334444444 345567999999999963 3222 244444 445666666667666655
No 17
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=48.71 E-value=25 Score=31.56 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhHhhcCCcEEEEecCC-CCCCCCCCCc
Q 017454 232 TSFTRLFKTIISKVVETYAPGAIVLQCGA-DSLAGDRLGC 270 (371)
Q Consensus 232 ~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~-D~~~~Dplg~ 270 (371)
.+.+..+++++.. ...+||+|+|..|. |...+.|++.
T Consensus 72 ~~~~~~~~~~l~~--~~~~pd~V~I~~G~ND~~~~~~~~~ 109 (274)
T 3bzw_A 72 DDVPRQAEKLKKE--HGGEVDAILVFMGTNDYNSSVPIGE 109 (274)
T ss_dssp GGHHHHHHHHHHH--HTTTCCEEEEECCHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHhc--cCCCCCEEEEEEecccCcccCCCcc
Confidence 3355556553321 23789999999998 6666556654
No 18
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=45.76 E-value=19 Score=30.95 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=37.0
Q ss_pred CChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhc--CCCEEEE
Q 017454 229 IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF--NLPLLVT 295 (371)
Q Consensus 229 ~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~--~~p~~~~ 295 (371)
.+-.+.+..++.. +...+||+|+|+.|.. |-......+.+.+.++++.+++. +.+++++
T Consensus 66 ~~~~~~~~~l~~~----l~~~~pd~vvi~~G~N----D~~~~~~~~~~~l~~li~~i~~~~p~~~ii~~ 126 (215)
T 2vpt_A 66 WTIPQIASNINNW----LNTHNPDVVFLWIGGN----DLLLNGNLNATGLSNLIDQIFTVKPNVTLFVA 126 (215)
T ss_dssp CCHHHHHHHHHHH----HHHHCCSEEEEECCHH----HHHHHCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred hhHHHHHHHHHHH----hhccCCCEEEEEcccc----ccCCCCChhHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3444555555443 3458999999999963 21112234567888899988876 4455544
No 19
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=45.37 E-value=3.5 Score=32.25 Aligned_cols=53 Identities=15% Similarity=0.303 Sum_probs=42.9
Q ss_pred HHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCH----HHHHHHHHHHHhcCCCE
Q 017454 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI----DGHAECVRFVKKFNLPL 292 (371)
Q Consensus 240 ~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~----~g~~~~~~~l~~~~~p~ 292 (371)
+++..+.++|+-++=+++++.|...+.|+|.|-+.. +...+..++|++.+..+
T Consensus 38 pvis~l~~~~~v~vnIl~g~i~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~v 94 (100)
T 2qsw_A 38 PIISHIVQEYQVEVSIIQGNIQQTKQGAVGSLYIQLLGEEQNILAAIEGLRKLRVET 94 (100)
T ss_dssp CHHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHhCCCEEEEEeeceEcCCeeEEEEEEEEECCHHHHHHHHHHHHHcCCEE
Confidence 467778889999999999999999999999987754 34566777888777544
No 20
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=44.91 E-value=21 Score=32.88 Aligned_cols=34 Identities=9% Similarity=0.194 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCC
Q 017454 233 SFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 266 (371)
Q Consensus 233 ~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~D 266 (371)
.+...+.+.|..++++++||+|+.-.|.|.|.+.
T Consensus 131 ~~~~~l~~~l~~~ir~~~PdvV~t~~~~d~HpDH 164 (273)
T 3dff_A 131 DLVGEVADDIRSIIDEFDPTLVVTCAAIGEHPDH 164 (273)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH
T ss_pred chHHHHHHHHHHHHHHcCCCEEEECCCCCCChHH
Confidence 3455666677789999999999998887776544
No 21
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=44.03 E-value=62 Score=27.38 Aligned_cols=57 Identities=16% Similarity=0.178 Sum_probs=33.3
Q ss_pred HHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCCCcch
Q 017454 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304 (371)
Q Consensus 238 ~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY~~~~ 304 (371)
++.++. .+++.+||+||+ +| |.. ....+.+.+.++.+.+++.+.|++++. |--....
T Consensus 21 ~~~~~~-~~~~~~~D~vi~-~G-Dl~------~~~~~~~~~~~~~~~l~~~~~pv~~v~-GNHD~~~ 77 (228)
T 1uf3_A 21 LEKFVK-LAPDTGADAIAL-IG-NLM------PKAAKSRDYAAFFRILSEAHLPTAYVP-GPQDAPI 77 (228)
T ss_dssp HHHHHT-HHHHHTCSEEEE-ES-CSS------CTTCCHHHHHHHHHHHGGGCSCEEEEC-CTTSCSH
T ss_pred HHHHHH-HHhhcCCCEEEE-CC-CCC------CCCCCHHHHHHHHHHHHhcCCcEEEEC-CCCCchh
Confidence 444443 344558998765 34 322 112244566677788888888987774 6655443
No 22
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=43.35 E-value=25 Score=32.36 Aligned_cols=34 Identities=6% Similarity=0.138 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCC
Q 017454 233 SFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 266 (371)
Q Consensus 233 ~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~D 266 (371)
.+...+.+.|..++++++||+|+.-.|.|.|.+.
T Consensus 128 ~~~~~~~~~l~~~ir~~~PdvV~t~~~~d~HpDH 161 (270)
T 3dfi_A 128 DLVAAIREDIESMIAECDPTLVLTCVAIGKHPDH 161 (270)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH
T ss_pred chHHHHHHHHHHHHHHcCCCEEEeCCCCCCChhH
Confidence 3455566677789999999999998888777644
No 23
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=42.69 E-value=7.1 Score=32.99 Aligned_cols=51 Identities=18% Similarity=0.097 Sum_probs=29.0
Q ss_pred hHhhcCCcEEEEecCC-CCCCCCCCC---ccccCHHHHH----HHHHHHHhcCCCEEEE
Q 017454 245 VVETYAPGAIVLQCGA-DSLAGDRLG---CFNLSIDGHA----ECVRFVKKFNLPLLVT 295 (371)
Q Consensus 245 ~~~~f~Pd~IvvsaG~-D~~~~Dplg---~~~ls~~g~~----~~~~~l~~~~~p~~~~ 295 (371)
.+...+||+|+|+.|. |.....+.+ ....+.+.|. ++++.+++.+.+++++
T Consensus 78 ~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~ 136 (216)
T 3rjt_A 78 DVMALQPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPRVREMFLL 136 (216)
T ss_dssp HTGGGCCSEEEEECCHHHHHHHHHSTTCGGGCCCHHHHHHHHHHHHHHHGGGSSEEEEE
T ss_pred HHhhcCCCEEEEEeeccccchhhccccccccCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 3456799999999996 332211111 1134555554 4555666666666666
No 24
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=40.59 E-value=33 Score=29.16 Aligned_cols=71 Identities=17% Similarity=0.225 Sum_probs=37.9
Q ss_pred EeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCC-CCC-CCCCCCccccCHHHH----HHHHHHHHhcCCCEEE
Q 017454 221 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA-DSL-AGDRLGCFNLSIDGH----AECVRFVKKFNLPLLV 294 (371)
Q Consensus 221 vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~-D~~-~~Dplg~~~ls~~g~----~~~~~~l~~~~~p~~~ 294 (371)
+|..++ |.+-.+.+..++.-+.+.+...+||+|+|+.|. |.. ..+ ....+.+.| .++++.+++. .++++
T Consensus 60 ~n~g~~-G~t~~~~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~---~~~~~~~~~~~~l~~li~~l~~~-~~iil 134 (218)
T 1vjg_A 60 YNLGIR-RDTSSDIAKRWLQEVSLRLHKEYNSLVVFSFGLNDTTLENG---KPRVSIAETIKNTREILTQAKKL-YPVLM 134 (218)
T ss_dssp EEEECT-TCCHHHHHHHHHHHHHTTCCTTSEEEEEEECCHHHHCEETT---EESSCHHHHHHHHHHHHHHHHHH-SCEEE
T ss_pred EeCCCC-CcCHHHHHHHhHHhhhhhhccCCCCEEEEEecCCcchhhcc---cccCCHHHHHHHHHHHHHHHHHh-CcEEE
Confidence 455553 334445555554422222223699999999997 332 111 123455544 4456666666 67777
Q ss_pred Ee
Q 017454 295 TG 296 (371)
Q Consensus 295 ~l 296 (371)
+.
T Consensus 135 ~~ 136 (218)
T 1vjg_A 135 IS 136 (218)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 25
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=39.38 E-value=11 Score=29.39 Aligned_cols=53 Identities=13% Similarity=0.377 Sum_probs=43.0
Q ss_pred HHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCH----HHHHHHHHHHHhcCCCE
Q 017454 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI----DGHAECVRFVKKFNLPL 292 (371)
Q Consensus 240 ~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~----~g~~~~~~~l~~~~~p~ 292 (371)
+++..+.++|+-++=+++++.|...+.|+|.|-+.. +...+..++|++.+..+
T Consensus 38 pvis~l~~~~~v~vnIl~g~i~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~v 94 (101)
T 2qrr_A 38 PLMSQISRKYNIDVSILSSDLDYAGGVKFGMMVAELFGNEQDDSAAIEYLRENNVKV 94 (101)
T ss_dssp CHHHHHHHHSCCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHhCCCEEEEEeeeeEcCCeeEEEEEEEEeCCHHHHHHHHHHHHHcCCEE
Confidence 567778889999999999999999999999987743 34566777888777644
No 26
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=39.38 E-value=28 Score=30.16 Aligned_cols=63 Identities=14% Similarity=0.212 Sum_probs=35.0
Q ss_pred EeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHH----HHHHHHHHHhc--CCCEEE
Q 017454 221 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG----HAECVRFVKKF--NLPLLV 294 (371)
Q Consensus 221 vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g----~~~~~~~l~~~--~~p~~~ 294 (371)
+|.-+. |.+-.+.+..+++ .++...+||+|+|+.|..=.. .+.+. +.++++.+++. +.++++
T Consensus 68 ~n~g~~-G~t~~~~~~~~~~---~~l~~~~pd~vvi~~G~ND~~--------~~~~~~~~~l~~~i~~l~~~~p~~~ii~ 135 (232)
T 1es9_A 68 LNFGIG-GDSTQHVLWRLEN---GELEHIRPKIVVVWVGTNNHG--------HTAEQVTGGIKAIVQLVNERQPQARVVV 135 (232)
T ss_dssp EEEECT-TCCHHHHHHHHHT---TTTTTCCCSEEEEECCTTCTT--------SCHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred EEeecc-cccHHHHHHHHhc---CccccCCCCEEEEEeecCCCC--------CCHHHHHHHHHHHHHHHHHHCCCCeEEE
Confidence 455443 3333444444432 134568999999999973221 34444 44556666665 455655
Q ss_pred E
Q 017454 295 T 295 (371)
Q Consensus 295 ~ 295 (371)
+
T Consensus 136 ~ 136 (232)
T 1es9_A 136 L 136 (232)
T ss_dssp E
T ss_pred e
Confidence 5
No 27
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=39.02 E-value=42 Score=27.45 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=36.3
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHH----HHHHHHhcCCCEEEE
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE----CVRFVKKFNLPLLVT 295 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~----~~~~l~~~~~p~~~~ 295 (371)
.+|...+ |.+-.+.+..+++ .+...+||+||++.|..=.. .....+.+.|.+ +++.++ +.+++++
T Consensus 42 v~n~g~~-G~~~~~~~~~~~~----~~~~~~pd~vvi~~G~ND~~----~~~~~~~~~~~~~l~~~i~~~~--~~~vi~~ 110 (195)
T 1yzf_A 42 VINAGMP-GDTTEDGLKRLNK----EVLIEKPDEVVIFFGANDAS----LDRNITVATFRENLETMIHEIG--SEKVILI 110 (195)
T ss_dssp EEEEECT-TCCHHHHHHHHHH----HTGGGCCSEEEEECCTTTTC----TTSCCCHHHHHHHHHHHHHHHC--GGGEEEE
T ss_pred EEeCCCC-CCCHHHHHHHHHH----hhhhcCCCEEEEEeeccccC----ccCCCCHHHHHHHHHHHHHHhc--CCEEEEE
Confidence 3566553 3344445544443 34558999999999963322 122456666554 333333 5566655
Q ss_pred e
Q 017454 296 G 296 (371)
Q Consensus 296 l 296 (371)
.
T Consensus 111 ~ 111 (195)
T 1yzf_A 111 T 111 (195)
T ss_dssp C
T ss_pred c
Confidence 4
No 28
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=38.55 E-value=61 Score=30.05 Aligned_cols=62 Identities=18% Similarity=0.277 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcC--CCEEEEeCCCCC
Q 017454 232 TSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFN--LPLLVTGGGGYT 301 (371)
Q Consensus 232 ~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~--~p~~~~leGGY~ 301 (371)
++...+|++++. .+++-+||+||+ || |. =.-.-..+.+....+.+.++++. .|++++. |--+
T Consensus 44 ~~~~~~l~~lv~-~~~~~~~D~vli-aG-D~----l~d~~~~~~~~~~~~~~~l~~L~~~~pv~~i~-GNHD 107 (336)
T 2q8u_A 44 EELKKALDKVVE-EAEKREVDLILL-TG-DL----LHSRNNPSVVALHDLLDYLKRMMRTAPVVVLP-GNHD 107 (336)
T ss_dssp HHHHHHHHHHHH-HHHHHTCSEEEE-ES-CS----BSCSSCCCHHHHHHHHHHHHHHHHHSCEEECC-C---
T ss_pred HHHHHHHHHHHH-HHHHhCCCEEEE-CC-cc----ccCCCCCCHHHHHHHHHHHHHHHhcCCEEEEC-CCCC
Confidence 456678887775 456679998776 44 30 22122233433333333333332 7877764 5444
No 29
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=37.89 E-value=70 Score=32.30 Aligned_cols=57 Identities=18% Similarity=0.290 Sum_probs=38.5
Q ss_pred HHHHHHHHhHhhcCCcEEEEecC-CCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCCCcch
Q 017454 237 LFKTIISKVVETYAPGAIVLQCG-ADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304 (371)
Q Consensus 237 ~~~~~l~~~~~~f~Pd~IvvsaG-~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY~~~~ 304 (371)
.+.+.|..+.+.|+|++|+|... .-...||.+. .+.+.+.. +.||+.+---||....
T Consensus 72 kL~~aI~~~~~~~~P~~I~V~tTC~~elIGdDi~----------~v~~~~~~-~~pVi~v~tpgf~g~~ 129 (525)
T 3aek_B 72 LLKDALAAAHARYKPQAMAVALTCTAELLQDDPN----------GISRALNL-PVPVVPLELPSYSRKE 129 (525)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEECTTGGGSCCCHH----------HHHHHHTC-SSCEEECCCCTTTCCH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCcHHHHhcccHH----------HHHHHhcC-CCCEEEEECCCcCCch
Confidence 34455556777899997766554 6777777553 24444444 8899999888988753
No 30
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=37.74 E-value=38 Score=33.21 Aligned_cols=69 Identities=16% Similarity=0.282 Sum_probs=43.1
Q ss_pred ecCCCCCCh-HHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCC
Q 017454 223 VPLKDGIDD-TSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGG 299 (371)
Q Consensus 223 vPL~~g~~D-~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGG 299 (371)
|||-..+.+ .++...|.+.+ |-+++|+-..|||-.|-.+..++. .+...+-...+++.+.++++|-+||
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~yi~~~~~~~iViK~GG~~l~~~~-------~~~~~~~i~~l~~~g~~vvlVhggg 84 (456)
T 3d2m_A 15 VPRGSHMNAPDSFVAHFREAA-PYIRQMRGTTLVAGIDGRLLEGGT-------LNKLAADIGLLSQLGIRLVLIHGAY 84 (456)
T ss_dssp ----------CCHHHHHHHHH-HHHHHHTTCEEEEEECGGGGTSTH-------HHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred CcCcccCCchhHHHHHHHHhH-HHHHHhcCCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 333333333 56888898875 568999999999999988876422 2233444444556677788888887
No 31
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=37.59 E-value=25 Score=30.48 Aligned_cols=21 Identities=24% Similarity=0.156 Sum_probs=16.1
Q ss_pred HHHhCCcEEEEeccCCCChhh
Q 017454 159 LLKYHARVLYIDIDVHHGDGV 179 (371)
Q Consensus 159 l~~~~~RVlivD~DvHHGnGt 179 (371)
|.++.+||++||.|..+|+=+
T Consensus 27 la~~g~~VlliD~D~~~~~l~ 47 (237)
T 1g3q_A 27 LGDRGRKVLAVDGDLTMANLS 47 (237)
T ss_dssp HHHTTCCEEEEECCTTSCCHH
T ss_pred HHhcCCeEEEEeCCCCCCChh
Confidence 334568999999999887644
No 32
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=37.17 E-value=34 Score=28.78 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=30.6
Q ss_pred HhHhhcCC-cEEEEecCCCCCCCCCCCccccCHHHH----HHHHHHHHhcC---------CCEEEEe
Q 017454 244 KVVETYAP-GAIVLQCGADSLAGDRLGCFNLSIDGH----AECVRFVKKFN---------LPLLVTG 296 (371)
Q Consensus 244 ~~~~~f~P-d~IvvsaG~D~~~~Dplg~~~ls~~g~----~~~~~~l~~~~---------~p~~~~l 296 (371)
..+..++| |+|+|+.|.. |-...+..+.+.| .++++.+++.+ .+++++.
T Consensus 76 ~~l~~~~p~d~vvi~~G~N----D~~~~~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~ 138 (216)
T 2q0q_A 76 SCLATHLPLDLVIIMLGTN----DTKAYFRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVS 138 (216)
T ss_dssp HHHHHHCSCSEEEEECCTG----GGSGGGCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEE
T ss_pred HHHHhCCCCCEEEEEecCc----ccchhcCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEe
Confidence 34556788 9999999973 3222234565554 45666667666 5666663
No 33
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=36.78 E-value=17 Score=28.63 Aligned_cols=53 Identities=8% Similarity=0.293 Sum_probs=42.8
Q ss_pred HHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCH----HHHHHHHHHHHhcCCCE
Q 017454 240 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI----DGHAECVRFVKKFNLPL 292 (371)
Q Consensus 240 ~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~----~g~~~~~~~l~~~~~p~ 292 (371)
+++..++++|+-++=+++++.|...+.|+|.|-+.. +...+..++|++.+..+
T Consensus 36 PiIs~l~~~~~v~vnIL~g~I~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~v 92 (106)
T 3dhx_A 36 PLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKV 92 (106)
T ss_dssp CHHHHHHHHSCCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHCCCEEEEEEEeEEECCeeEEEEEEEEeCCHHHHHHHHHHHHHCCCEE
Confidence 467778889999999999999999999999986644 34566777888877543
No 34
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=36.75 E-value=1e+02 Score=28.10 Aligned_cols=75 Identities=19% Similarity=0.184 Sum_probs=41.6
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCE
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPL 292 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~ 292 (371)
++|=|=....=+.+.+..+.+.+..+-+. +..+||+ ++|.|.-..+.. .. ..+.+..+.+.+..+..|+
T Consensus 35 tlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~~--~~-~~~~~~~~~~~l~~~~kPv 110 (264)
T 3he2_A 35 ELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFA--AD-YPDRLIELHKAMDASPMPV 110 (264)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTTG--GG-HHHHHHHHHHHHHHCSSCE
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchhh--HH-HHHHHHHHHHHHHhCCCCE
Confidence 34444333444667777777777765555 6678877 456665421110 00 1223445667777889999
Q ss_pred EEEeCC
Q 017454 293 LVTGGG 298 (371)
Q Consensus 293 ~~~leG 298 (371)
|....|
T Consensus 111 IAav~G 116 (264)
T 3he2_A 111 VGAING 116 (264)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 987753
No 35
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=36.45 E-value=16 Score=31.94 Aligned_cols=19 Identities=32% Similarity=0.310 Sum_probs=15.6
Q ss_pred CCcEEEEeccCCCChhhHH
Q 017454 163 HARVLYIDIDVHHGDGVEE 181 (371)
Q Consensus 163 ~~RVlivD~DvHHGnGtq~ 181 (371)
.+||++||+|...|+=+..
T Consensus 34 g~~VlliD~D~~~~~l~~~ 52 (245)
T 3ea0_A 34 DIHVLAVDISLPFGDLDMY 52 (245)
T ss_dssp TCCEEEEECCTTTCCGGGG
T ss_pred CCCEEEEECCCCCCCHHHH
Confidence 7899999999987765543
No 36
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=36.38 E-value=71 Score=30.46 Aligned_cols=58 Identities=16% Similarity=0.288 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHH---HHhcCCCEEEEeC
Q 017454 232 TSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF---VKKFNLPLLVTGG 297 (371)
Q Consensus 232 ~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~---l~~~~~p~~~~le 297 (371)
++...+|++++.. +.+-+||+||+ || |=...-.-+.+.+..+.+. +++.+.|++++.|
T Consensus 43 ~~~~~~l~~~v~~-~~~~~~D~Vli-aG------Dl~d~~~p~~~~~~~~~~~l~~L~~~~~pv~~v~G 103 (386)
T 3av0_A 43 KDIYDSFKLCIKK-ILEIKPDVVLH-SG------DLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAG 103 (386)
T ss_dssp HHHHHHHHHHHHH-HHTTCCSEEEE-CS------CSBSSSSCCHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHHHH-HHHcCCCEEEE-CC------CCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEcC
Confidence 3456778877764 55679999876 33 4222222334444444444 4444788877753
No 37
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=35.83 E-value=1.2e+02 Score=28.14 Aligned_cols=61 Identities=16% Similarity=0.267 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHH---HHHHHHHhcCCCEEEEeCCCCC
Q 017454 232 TSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA---ECVRFVKKFNLPLLVTGGGGYT 301 (371)
Q Consensus 232 ~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~---~~~~~l~~~~~p~~~~leGGY~ 301 (371)
+++...|++++. .+.+.+||+||+ +| |.. -...-+.+... +..+.+++.+.|++++. |--+
T Consensus 23 ~~~~~~~~~~~~-~~~~~~~D~vl~-~G-Dl~-----d~~~~~~~~~~~~~~~l~~l~~~~~~v~~v~-GNHD 86 (333)
T 1ii7_A 23 EEFAEAFKNALE-IAVQENVDFILI-AG-DLF-----HSSRPSPGTLKKAIALLQIPKEHSIPVFAIE-GNHD 86 (333)
T ss_dssp HHHHHHHHHHHH-HHHHTTCSEEEE-ES-CSB-----SSSSCCHHHHHHHHHHHHHHHTTTCCEEEEC-CTTT
T ss_pred HHHHHHHHHHHH-HHHhcCCCEEEE-CC-CcC-----CCCCCCHHHHHHHHHHHHHHHHCCCcEEEeC-CcCC
Confidence 456677877765 466789998876 44 322 11122333333 44455555678988774 5444
No 38
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=35.77 E-value=76 Score=31.05 Aligned_cols=70 Identities=16% Similarity=0.102 Sum_probs=55.6
Q ss_pred CCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHH----HHHHHHHHHHhcCCCEEEEeC
Q 017454 228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSID----GHAECVRFVKKFNLPLLVTGG 297 (371)
Q Consensus 228 g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~----g~~~~~~~l~~~~~p~~~~le 297 (371)
..+.+.+++..+.++..=+.+...+.|+|-.|......|.+|.+...++ |...+++.+++.+.++-+=.+
T Consensus 25 ~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~ 98 (417)
T 1szn_A 25 DIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYST 98 (417)
T ss_dssp CCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEEEEEeC
Confidence 4567778887777766556778899999999999988899999877755 889999999999877543333
No 39
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=35.65 E-value=28 Score=30.57 Aligned_cols=22 Identities=14% Similarity=0.064 Sum_probs=16.7
Q ss_pred HHHhCCcEEEEeccCCCChhhH
Q 017454 159 LLKYHARVLYIDIDVHHGDGVE 180 (371)
Q Consensus 159 l~~~~~RVlivD~DvHHGnGtq 180 (371)
|.++.+||++||.|..+|+=+.
T Consensus 27 la~~g~~VlliD~D~~~~~~~~ 48 (260)
T 3q9l_A 27 LAQKGKKTVVIDFAIGLRNLDL 48 (260)
T ss_dssp HHHTTCCEEEEECCCSSCCHHH
T ss_pred HHhCCCcEEEEECCCCCCChhH
Confidence 3345789999999998776443
No 40
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=34.84 E-value=33 Score=30.50 Aligned_cols=23 Identities=9% Similarity=0.115 Sum_probs=17.1
Q ss_pred HhCCcEEEEeccCCCChhhHHhhh
Q 017454 161 KYHARVLYIDIDVHHGDGVEEAFY 184 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnGtq~~f~ 184 (371)
++.+||++||+|. +|+.+...+.
T Consensus 27 ~~G~~VlliD~D~-q~~~~~~~~~ 49 (269)
T 1cp2_A 27 AMGKTIMVVGCDP-KADSTRLLLG 49 (269)
T ss_dssp TTTCCEEEEEECT-TSCSSHHHHT
T ss_pred HCCCcEEEEcCCC-CCCHHHHhcC
Confidence 4568999999996 5666666654
No 41
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=33.78 E-value=32 Score=30.45 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=15.7
Q ss_pred HHhCCcEEEEeccCCCChhh
Q 017454 160 LKYHARVLYIDIDVHHGDGV 179 (371)
Q Consensus 160 ~~~~~RVlivD~DvHHGnGt 179 (371)
.+..+||++||.|...||=+
T Consensus 28 a~~g~~VlliD~D~~~~~l~ 47 (263)
T 1hyq_A 28 AQLGHDVTIVDADITMANLE 47 (263)
T ss_dssp HHTTCCEEEEECCCSSSSHH
T ss_pred HhCCCcEEEEECCCCCCCcc
Confidence 34568999999999887644
No 42
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=33.65 E-value=1.3e+02 Score=27.16 Aligned_cols=76 Identities=7% Similarity=-0.015 Sum_probs=40.5
Q ss_pred EeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCCCCCCc-cccCH-------HHHHHHHHHH
Q 017454 221 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAGDRLGC-FNLSI-------DGHAECVRFV 285 (371)
Q Consensus 221 vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~Dplg~-~~ls~-------~g~~~~~~~l 285 (371)
+|-|=. ..=+.+.+..+.+.+..+-..-+..+||+ ++|.|.-.-..... ..-+. +.+..+.+.+
T Consensus 22 lnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 100 (263)
T 3l3s_A 22 LGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDL 100 (263)
T ss_dssp ECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHHHHH
Confidence 344433 34466777777777766544334456665 56777654322110 00011 1233455667
Q ss_pred HhcCCCEEEEeC
Q 017454 286 KKFNLPLLVTGG 297 (371)
Q Consensus 286 ~~~~~p~~~~le 297 (371)
..+.+|+|....
T Consensus 101 ~~~~kPvIAav~ 112 (263)
T 3l3s_A 101 AHCPKPTIALVE 112 (263)
T ss_dssp HTCSSCEEEEES
T ss_pred HhCCCCEEEEEC
Confidence 778999998764
No 43
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=32.67 E-value=60 Score=28.02 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=26.3
Q ss_pred HhHhhcCC-cEEEEecCCCCCCCCCCCccccCHHHHH----HHHHHHHhc
Q 017454 244 KVVETYAP-GAIVLQCGADSLAGDRLGCFNLSIDGHA----ECVRFVKKF 288 (371)
Q Consensus 244 ~~~~~f~P-d~IvvsaG~D~~~~Dplg~~~ls~~g~~----~~~~~l~~~ 288 (371)
..+...+| |+|+|..|. .|-......+.+.|. ++++.+++.
T Consensus 94 ~~l~~~~p~d~VvI~~Gt----ND~~~~~~~~~~~~~~~l~~li~~ir~~ 139 (232)
T 3dci_A 94 VALSCHMPLDLVIIMLGT----NDIKPVHGGRAEAAVSGMRRLAQIVETF 139 (232)
T ss_dssp HHHHHHCSCSEEEEECCT----TTTSGGGTSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhCCCCCEEEEEecc----CCCccccCCCHHHHHHHHHHHHHHHHHh
Confidence 34566899 999999995 344433345665554 456666664
No 44
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=32.41 E-value=40 Score=29.90 Aligned_cols=19 Identities=32% Similarity=0.628 Sum_probs=14.7
Q ss_pred HHhCCcEEEEeccCCCChhh
Q 017454 160 LKYHARVLYIDIDVHHGDGV 179 (371)
Q Consensus 160 ~~~~~RVlivD~DvHHGnGt 179 (371)
.+..+||++||+|. +|+-+
T Consensus 32 a~~g~~VlliD~D~-~~~~~ 50 (257)
T 1wcv_1 32 ARLGKRVLLVDLDP-QGNAT 50 (257)
T ss_dssp HHTTCCEEEEECCT-TCHHH
T ss_pred HHCCCCEEEEECCC-CcCHH
Confidence 34568999999998 47754
No 45
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=32.33 E-value=43 Score=32.12 Aligned_cols=69 Identities=17% Similarity=0.181 Sum_probs=38.5
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCC-cEEEEecCCCCCCCCCCCccccCHHHH----HHHHHHHHhcCCCEEE
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAP-GAIVLQCGADSLAGDRLGCFNLSIDGH----AECVRFVKKFNLPLLV 294 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~P-d~IvvsaG~D~~~~Dplg~~~ls~~g~----~~~~~~l~~~~~p~~~ 294 (371)
.+|.-.. |.+-..++.. ..+.+++.+++| |+|+|+.|.- |-......+.+.| .++++.+++.+.++++
T Consensus 202 v~N~Gis-G~tt~~~l~~--~rl~~~l~~~~p~d~VvI~~G~N----D~~~~~~~~~~~~~~~l~~ii~~lr~~~a~vil 274 (375)
T 2o14_A 202 VRNMASG-GQIARGFRND--GQLEAILKYIKPGDYFMLQLGIN----DTNPKHKESEAEFKEVMRDMIRQVKAKGADVIL 274 (375)
T ss_dssp EEECCCT-TCCHHHHHHS--SHHHHHHTTCCTTCEEEEECCTG----GGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEeccC-CCcHhhhhhc--ccHHHHHHhCCCCCEEEEEEEcc----CCCccCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 5676654 3333344420 123455677899 9999999972 3222223455444 4556666666665555
Q ss_pred E
Q 017454 295 T 295 (371)
Q Consensus 295 ~ 295 (371)
+
T Consensus 275 v 275 (375)
T 2o14_A 275 S 275 (375)
T ss_dssp E
T ss_pred E
Confidence 4
No 46
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=31.26 E-value=38 Score=32.16 Aligned_cols=22 Identities=27% Similarity=0.395 Sum_probs=17.8
Q ss_pred HhCCcEEEEeccCCCChhhHHhh
Q 017454 161 KYHARVLYIDIDVHHGDGVEEAF 183 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnGtq~~f 183 (371)
+..+||++||+|.. ||.+..++
T Consensus 28 ~~G~rVLlID~D~q-~~~~~~l~ 49 (361)
T 3pg5_A 28 LQGKRVLYVDCDPQ-CNATQLML 49 (361)
T ss_dssp HTTCCEEEEECCTT-CTTHHHHS
T ss_pred hCCCcEEEEEcCCC-CChhhhhc
Confidence 45699999999987 77777665
No 47
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=29.77 E-value=1.5e+02 Score=27.07 Aligned_cols=78 Identities=18% Similarity=0.110 Sum_probs=38.7
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCCCCCCcccc------CHHHHHHHHHHHH
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAGDRLGCFNL------SIDGHAECVRFVK 286 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~Dplg~~~l------s~~g~~~~~~~l~ 286 (371)
++|-|=+...=+.+.+..+.+.+..+-+.-+. +||+ ++|.|.-.-.....-.. ....+..+.+.+.
T Consensus 40 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 118 (280)
T 2f6q_A 40 MFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFI 118 (280)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHHHHHHHHHHHHHHHHHH
Confidence 45555333444667777777777665443334 6666 45666532111000000 0011233455667
Q ss_pred hcCCCEEEEeCC
Q 017454 287 KFNLPLLVTGGG 298 (371)
Q Consensus 287 ~~~~p~~~~leG 298 (371)
.+.+|+|+...|
T Consensus 119 ~~~kPvIAav~G 130 (280)
T 2f6q_A 119 DFPKPLIAVVNG 130 (280)
T ss_dssp SCCSCEEEEECS
T ss_pred cCCCCEEEEECC
Confidence 788999987643
No 48
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=29.43 E-value=47 Score=29.98 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=17.0
Q ss_pred HhCCcEEEEeccCCCChhhHHhhh
Q 017454 161 KYHARVLYIDIDVHHGDGVEEAFY 184 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnGtq~~f~ 184 (371)
+..+||++||+|.. ++.+...+.
T Consensus 28 ~~G~rVlliD~D~q-~~~~~~~~~ 50 (289)
T 2afh_E 28 EMGKKVMIVGCDPK-ADSTRLILH 50 (289)
T ss_dssp HTTCCEEEEEECSS-SCSSHHHHC
T ss_pred HCCCeEEEEecCCC-CCHHHHhcC
Confidence 45689999999975 566666554
No 49
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=29.26 E-value=51 Score=29.89 Aligned_cols=22 Identities=32% Similarity=0.401 Sum_probs=16.9
Q ss_pred HHHhCCcEEEEeccCCCChhhH
Q 017454 159 LLKYHARVLYIDIDVHHGDGVE 180 (371)
Q Consensus 159 l~~~~~RVlivD~DvHHGnGtq 180 (371)
|.+..+||++||+|..+|+-+.
T Consensus 29 La~~G~~VlliD~D~~q~~l~~ 50 (286)
T 2xj4_A 29 LLYGGAKVAVIDLDLRQRTSAR 50 (286)
T ss_dssp HHHTTCCEEEEECCTTTCHHHH
T ss_pred HHHCCCcEEEEECCCCCCCHHH
Confidence 3345689999999998777654
No 50
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=29.26 E-value=1.2e+02 Score=27.24 Aligned_cols=63 Identities=8% Similarity=0.060 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHhHhhcCCcEEEEe-------cCCCCCCCCCCCccccCHHH-----HHHHHHHHHhcCCCEEEEeC
Q 017454 231 DTSFTRLFKTIISKVVETYAPGAIVLQ-------CGADSLAGDRLGCFNLSIDG-----HAECVRFVKKFNLPLLVTGG 297 (371)
Q Consensus 231 D~~y~~~~~~~l~~~~~~f~Pd~Ivvs-------aG~D~~~~Dplg~~~ls~~g-----~~~~~~~l~~~~~p~~~~le 297 (371)
+.+.+..+.+.+..+-..-+..+||+. +|.|.-.-. ... ..+. +..+.+.+..+.+|+|....
T Consensus 28 ~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~---~~~-~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 102 (257)
T 2ej5_A 28 TEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVT---EEM-DHGDVLRSRYAPMMKALHHLEKPVVAAVN 102 (257)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-----------CHHHHHHHTHHHHHHHHHHCCSCEEEEEC
T ss_pred CHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHh---hcc-chhHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 456666676777665444455677773 466653211 100 1111 33455667778999997764
No 51
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=29.20 E-value=46 Score=31.81 Aligned_cols=17 Identities=29% Similarity=0.448 Sum_probs=13.7
Q ss_pred HhCCcEEEEeccCCCChh
Q 017454 161 KYHARVLYIDIDVHHGDG 178 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnG 178 (371)
+..+||++||+|. +||-
T Consensus 141 ~~g~rVlliD~D~-q~~l 157 (398)
T 3ez2_A 141 MEDLRILVIDLDP-QSSA 157 (398)
T ss_dssp GGCCCEEEEEECT-TCHH
T ss_pred cCCCeEEEEeCCC-CCCh
Confidence 4579999999999 5763
No 52
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=28.12 E-value=2.1e+02 Score=26.23 Aligned_cols=78 Identities=15% Similarity=0.241 Sum_probs=37.7
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEe-------cCCCCCCCCCCCccc---------cCHHHHHHHHH
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQ-------CGADSLAGDRLGCFN---------LSIDGHAECVR 283 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~Ivvs-------aG~D~~~~Dplg~~~---------ls~~g~~~~~~ 283 (371)
++|-|=....=+.+.+..+.+.+..+-+.-+..+||+. +|.|.-.-.....-. -..+.+..+..
T Consensus 38 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (290)
T 3sll_A 38 TLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVIL 117 (290)
T ss_dssp EECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHHHH
Confidence 34444323344567777777777665443344566663 455543211111000 00122344566
Q ss_pred HHHhcCCCEEEEeC
Q 017454 284 FVKKFNLPLLVTGG 297 (371)
Q Consensus 284 ~l~~~~~p~~~~le 297 (371)
.+..+..|+|+...
T Consensus 118 ~l~~~~kPvIAav~ 131 (290)
T 3sll_A 118 TLRRMHQPVIAAIN 131 (290)
T ss_dssp HHHHCSSCEEEEEC
T ss_pred HHHhCCCCEEEEEC
Confidence 67788999998764
No 53
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=28.00 E-value=1.3e+02 Score=27.76 Aligned_cols=61 Identities=16% Similarity=0.388 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 017454 233 SFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300 (371)
Q Consensus 233 ~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY 300 (371)
++...|.+.+ |-+++|+-..|||-.|-.+..++. ..+.+.+-...+++.+.++++|-+||-
T Consensus 9 ~~~~~~~~a~-pyi~~~~~k~iVIKlGGs~l~~~~------~~~~~~~~i~~l~~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 9 QVAKVLSEAL-PYIRRFVGKTLVIKYGGNAMESEE------LKAGFARDVVLMKAVGINPVVVHGGGP 69 (300)
T ss_dssp HHHHHHHHHH-HHHHHHTTCEEEEEECCTTTTSSH------HHHHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred HHHHHHHHHh-HHHHHhcCCeEEEEECchhhCCch------HHHHHHHHHHHHHHCCCeEEEEECCcH
Confidence 6778888876 567889989999999988876531 012233334445566778888888853
No 54
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=27.62 E-value=1.1e+02 Score=29.10 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=53.0
Q ss_pred CCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHH----HHHHHHHHHHhcCCCEEEEeC
Q 017454 228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSID----GHAECVRFVKKFNLPLLVTGG 297 (371)
Q Consensus 228 g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~----g~~~~~~~l~~~~~p~~~~le 297 (371)
+.+.+.+++..+..+..=+.+...+.|+|-.|......|..|.+...++ |...+.+.+++.|.++-+=.+
T Consensus 22 ~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~ 95 (362)
T 1uas_A 22 GINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSD 95 (362)
T ss_dssp CCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEee
Confidence 4567777777776655545678899999999999877777888876654 788999999998877543333
No 55
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=27.46 E-value=33 Score=29.66 Aligned_cols=18 Identities=11% Similarity=-0.099 Sum_probs=13.7
Q ss_pred HhCCcEEEEeccCCCChhh
Q 017454 161 KYHARVLYIDIDVHHGDGV 179 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnGt 179 (371)
+..+||++||+|.. |+=+
T Consensus 26 ~~g~~VlliD~D~~-~~l~ 43 (254)
T 3kjh_A 26 SDYDKIYAVDGDPD-SCLG 43 (254)
T ss_dssp TTCSCEEEEEECTT-SCHH
T ss_pred HCCCeEEEEeCCCC-cChH
Confidence 44689999999995 5533
No 56
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=26.12 E-value=55 Score=29.03 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=15.4
Q ss_pred hCCcEEEEeccCCCChhhHHhh
Q 017454 162 YHARVLYIDIDVHHGDGVEEAF 183 (371)
Q Consensus 162 ~~~RVlivD~DvHHGnGtq~~f 183 (371)
+.+||++||+|.. |+.+...+
T Consensus 54 ~g~~VlliD~D~~-~~~~~~~~ 74 (267)
T 3k9g_A 54 KNNKVLLIDMDTQ-ASITSYFY 74 (267)
T ss_dssp TTSCEEEEEECTT-CHHHHHTH
T ss_pred CCCCEEEEECCCC-CCHHHHhh
Confidence 5699999999985 55555443
No 57
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=25.33 E-value=50 Score=28.34 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=31.4
Q ss_pred cCCcEEEEecCC-CCCCCCCCCcccc-CH----HHHHHHHHHHHhc--CCCEEEEe
Q 017454 249 YAPGAIVLQCGA-DSLAGDRLGCFNL-SI----DGHAECVRFVKKF--NLPLLVTG 296 (371)
Q Consensus 249 f~Pd~IvvsaG~-D~~~~Dplg~~~l-s~----~g~~~~~~~l~~~--~~p~~~~l 296 (371)
.+||+|+|+.|. |...+-|.+.+.- +. ..+.++++.+++. +.+++++.
T Consensus 81 ~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~~P~~~iil~~ 136 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTNWPTVPKLFIS 136 (232)
T ss_dssp TTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CCCCEEEEEEeccccccCcCCccccccchHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 499999999997 4555555554431 11 2566677777776 67777654
No 58
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=24.03 E-value=69 Score=28.87 Aligned_cols=21 Identities=29% Similarity=0.417 Sum_probs=15.6
Q ss_pred HhCCcEEEEeccCCCChhhHHh
Q 017454 161 KYHARVLYIDIDVHHGDGVEEA 182 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnGtq~~ 182 (371)
+..+||++||+|.. |+.+..+
T Consensus 63 ~~G~rVlliD~D~q-~~~~~~l 83 (298)
T 2oze_A 63 KLNLKVLMIDKDLQ-ATLTKDL 83 (298)
T ss_dssp HTTCCEEEEEECTT-CHHHHHH
T ss_pred hCCCeEEEEeCCCC-CCHHHHH
Confidence 45689999999986 5655443
No 59
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=23.87 E-value=77 Score=29.27 Aligned_cols=66 Identities=14% Similarity=0.283 Sum_probs=43.2
Q ss_pred CChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 017454 229 IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301 (371)
Q Consensus 229 ~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY~ 301 (371)
....++...|.+.+ |-+++|+-..|||-.|-.+..++. ..+.+.+-...+++.+.++++|-+||-.
T Consensus 4 ~~~~~~~~~~~~a~-pyi~~~~~k~iViKlGGs~l~~~~------~~~~~~~~i~~l~~~G~~vViVhGgG~~ 69 (299)
T 2ap9_A 4 LPTHIKAQVLAEAL-PWLKQLHGKVVVVKYGGNAMTDDT------LRRAFAADMAFLRNCGIHPVVVHGGGPQ 69 (299)
T ss_dssp SCHHHHHHHHHHHH-HHHHHHTTCEEEEEECTHHHHSHH------HHHHHHHHHHHHHTTTCEEEEEECCSHH
T ss_pred CChhhHHHHHHHHH-HHHHHhCCCeEEEEECchhhCCch------HHHHHHHHHHHHHHCCCcEEEEECCcHH
Confidence 34677888898876 567889999999999966654320 1122333344455567778888777643
No 60
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=23.86 E-value=46 Score=31.94 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=13.6
Q ss_pred HhCCcEEEEeccCCCChh
Q 017454 161 KYHARVLYIDIDVHHGDG 178 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnG 178 (371)
+..+||++||+|. +||-
T Consensus 144 ~~g~rVlliD~D~-~~~l 160 (403)
T 3ez9_A 144 RHDLRILVIDLDP-QASS 160 (403)
T ss_dssp GGCCCEEEEEESS-SSGG
T ss_pred cCCCeEEEEeCCC-CCCh
Confidence 4579999999999 5653
No 61
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=23.56 E-value=64 Score=29.35 Aligned_cols=22 Identities=27% Similarity=0.193 Sum_probs=15.9
Q ss_pred HHHhCCcEEEEeccCCCChhhHH
Q 017454 159 LLKYHARVLYIDIDVHHGDGVEE 181 (371)
Q Consensus 159 l~~~~~RVlivD~DvHHGnGtq~ 181 (371)
|.+..+||++||+|. +|+-+..
T Consensus 65 La~~G~~VlliD~D~-~~~~~~~ 86 (307)
T 3end_A 65 FSILGKRVLQIGCDP-KHDSTFT 86 (307)
T ss_dssp HHHTTCCEEEEEESS-SCCTTHH
T ss_pred HHHCCCeEEEEeCCC-CCCHHHH
Confidence 334578999999998 4665543
No 62
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=23.32 E-value=70 Score=27.50 Aligned_cols=63 Identities=16% Similarity=0.230 Sum_probs=35.3
Q ss_pred EeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHH----HHHHHHHHhc--CCCEEE
Q 017454 221 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGH----AECVRFVKKF--NLPLLV 294 (371)
Q Consensus 221 vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~----~~~~~~l~~~--~~p~~~ 294 (371)
+|.-+. |.+-.+.+..+++ .++...+||+|+|..|..=. | .+.+.| .++++.+++. +.++++
T Consensus 69 ~n~g~~-G~t~~~~~~~~~~---~~l~~~~pd~vvi~~G~ND~-----~---~~~~~~~~~l~~~i~~l~~~~p~~~iil 136 (229)
T 1fxw_F 69 LNFGIG-GDTTRHVLWRLKN---GELENIKPKVIVVWVGTNNH-----E---NTAEEVAGGIEAIVQLINTRQPQAKIIV 136 (229)
T ss_dssp EEEECT-TCCHHHHHHHHHT---TTTSSCCCSEEEEECCTTCT-----T---SCHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred eeeccC-cchHHHHHHHHHc---CccccCCCCEEEEEEecCCC-----C---CCHHHHHHHHHHHHHHHHHHCCCCeEEE
Confidence 455443 3334444444432 13456899999999997322 2 455544 4456666654 455655
Q ss_pred E
Q 017454 295 T 295 (371)
Q Consensus 295 ~ 295 (371)
+
T Consensus 137 ~ 137 (229)
T 1fxw_F 137 L 137 (229)
T ss_dssp E
T ss_pred E
Confidence 4
No 63
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=23.12 E-value=1.9e+02 Score=25.75 Aligned_cols=75 Identities=19% Similarity=0.151 Sum_probs=39.3
Q ss_pred EeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEe-------cCCCCCCCCCCCccccCH----HHHHHHHHHHHhcC
Q 017454 221 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQ-------CGADSLAGDRLGCFNLSI----DGHAECVRFVKKFN 289 (371)
Q Consensus 221 vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~Ivvs-------aG~D~~~~Dplg~~~ls~----~g~~~~~~~l~~~~ 289 (371)
+|=|=+...=+.+.+..+.+.+..+-+.-+--+||+. +|.|.-.- +...-.. +.+..+...+..+.
T Consensus 15 lnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~---~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (254)
T 3hrx_A 15 LNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEF---GDRKPDYEAHLRRYNRVVEALSGLE 91 (254)
T ss_dssp ECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGT---TTSCCCHHHHTHHHHHHHHHHHTCS
T ss_pred EcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHh---cccchhhHHHHHHHHHHHHHHHhCC
Confidence 3433223333566677777777665443444566664 34443221 1111111 23345566777889
Q ss_pred CCEEEEeCC
Q 017454 290 LPLLVTGGG 298 (371)
Q Consensus 290 ~p~~~~leG 298 (371)
.|+|+...|
T Consensus 92 kPvIAav~G 100 (254)
T 3hrx_A 92 KPLVVAVNG 100 (254)
T ss_dssp SCEEEEECS
T ss_pred CCEEEEECC
Confidence 999987754
No 64
>1oe4_A SMUG1, single-strand selective monofunctional uracil DNA glycosylase; hydrolase, hydrolase/complex, SMUG1; HET: 3DR; 2.0A {Xenopus laevis} SCOP: c.18.1.3 PDB: 1oe5_A* 1oe6_A*
Probab=22.53 E-value=41 Score=30.88 Aligned_cols=62 Identities=10% Similarity=0.116 Sum_probs=37.3
Q ss_pred hhHHhhhcCCCEE-EEecccCCCCCCCCCCCCccccCCCCcccEEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEE
Q 017454 178 GVEEAFYFTDRVM-TVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVL 256 (371)
Q Consensus 178 Gtq~~f~~d~~Vl-~~SiH~~~~~~yPgtG~~~~~G~g~g~g~~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~Ivv 256 (371)
|+.+.||++..|. ++-+| .++|+ | .+++-..++...-+.......+.+..+++..+|++||.
T Consensus 127 G~~~~Fy~~~~v~Ni~PL~----f~~p~-G------------~~~t~d~~p~~e~~~l~~~C~~~l~~~l~~l~~~~vv~ 189 (247)
T 1oe4_A 127 GQPETFFKHCFVHNHCPLI----FMNHS-G------------KNLTPTDLPKAQRDTLLEICDEALCQAVRVLGVKLVIG 189 (247)
T ss_dssp SSHHHHHTTEEEEESCCCE----EECTT-C------------CEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred ccHHHhccccceeeecCcc----cccCC-C------------CCCCCCCCChHHHHhHHHHHHHHHHHHHhccCceEEEE
Confidence 7889999988887 67666 24662 1 12333333322222334455666777777789998775
No 65
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=22.45 E-value=1.6e+02 Score=26.63 Aligned_cols=64 Identities=9% Similarity=0.123 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCCCCCCccccCHHH-------HHHHHHHHHhcCCCEEEEe
Q 017454 231 DTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAGDRLGCFNLSIDG-------HAECVRFVKKFNLPLLVTG 296 (371)
Q Consensus 231 D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~Dplg~~~ls~~g-------~~~~~~~l~~~~~p~~~~l 296 (371)
+.+.+..+.+.+..+-+.-+..+||+ ++|.|.-.-...+ +.+. +..+.+.+..+.+|+|...
T Consensus 49 ~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 124 (263)
T 2j5g_A 49 TGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVT----NPREWDKTYWEGKKVLQNLLDIEVPVISAV 124 (263)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTT----SHHHHHHHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccC----CHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 35566666666665544444567776 5677763211110 1111 1234555667889999876
Q ss_pred CC
Q 017454 297 GG 298 (371)
Q Consensus 297 eG 298 (371)
.|
T Consensus 125 ~G 126 (263)
T 2j5g_A 125 NG 126 (263)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 66
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=22.39 E-value=3.6e+02 Score=24.29 Aligned_cols=69 Identities=17% Similarity=0.161 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCC--CCCCcc-c--cC-HHHHHHHHHHHHhcCCCEEEEe
Q 017454 230 DDTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAG--DRLGCF-N--LS-IDGHAECVRFVKKFNLPLLVTG 296 (371)
Q Consensus 230 ~D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~--Dplg~~-~--ls-~~g~~~~~~~l~~~~~p~~~~l 296 (371)
=+.+.+..+.+.+..+-+.-...+||+ ++|.|...- ++.+.. . .. ...+..+.+.+..+..|+|+..
T Consensus 39 l~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav 118 (274)
T 4fzw_C 39 FNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAV 118 (274)
T ss_dssp BCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHHHCSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 355666667777766544333446666 355554321 111110 0 00 1123456667778899999876
Q ss_pred CC
Q 017454 297 GG 298 (371)
Q Consensus 297 eG 298 (371)
.|
T Consensus 119 ~G 120 (274)
T 4fzw_C 119 NG 120 (274)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 67
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=22.37 E-value=86 Score=30.28 Aligned_cols=52 Identities=12% Similarity=0.207 Sum_probs=30.8
Q ss_pred HHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhc--CCCEEEEe
Q 017454 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF--NLPLLVTG 296 (371)
Q Consensus 243 ~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~--~~p~~~~l 296 (371)
...+.+.+||+|||..|..=...+ + ...--.+.+..+++.+++. +.|++++.
T Consensus 237 ~~~l~~~~pdlVvI~lGtND~~~~-~-~~~~~~~~l~~li~~ir~~~P~a~Illv~ 290 (385)
T 3skv_A 237 ARLIRDLPADLISLRVGTSNFMDG-D-GFVDFPANLVGFVQIIRERHPLTPIVLGS 290 (385)
T ss_dssp HHHHHHSCCSEEEEEESHHHHTTT-C-CTTTHHHHHHHHHHHHHTTCSSSCEEEEE
T ss_pred HHHHhccCCCEEEEEeeccCCCCC-C-CHHHHHHHHHHHHHHHHHHCCCCcEEEEc
Confidence 344566799999999996432221 0 1111234556677777776 56776654
No 68
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=22.27 E-value=59 Score=30.87 Aligned_cols=24 Identities=21% Similarity=0.468 Sum_probs=16.1
Q ss_pred HHHhCCcEEEEeccCCCChhhHHhhh
Q 017454 159 LLKYHARVLYIDIDVHHGDGVEEAFY 184 (371)
Q Consensus 159 l~~~~~RVlivD~DvHHGnGtq~~f~ 184 (371)
|.++.+||++||+| .+|+ ....|.
T Consensus 168 La~~g~rVlliD~D-~~~~-l~~~lg 191 (373)
T 3fkq_A 168 HANMGKKVFYLNIE-QCGT-TDVFFQ 191 (373)
T ss_dssp HHHHTCCEEEEECC-TTCC-HHHHCC
T ss_pred HHhCCCCEEEEECC-CCCC-HHHHcC
Confidence 33457899999999 6663 334443
No 69
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=22.02 E-value=85 Score=26.64 Aligned_cols=36 Identities=28% Similarity=0.488 Sum_probs=22.2
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCCcEEEEecC
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCG 259 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG 259 (371)
+.|| .|..+.......+. |..++++.+||+|.+|=-
T Consensus 18 s~Ni---~g~~~~~~~~r~~~-i~~~i~~~~pDIi~LQEv 53 (256)
T 4fva_A 18 SWNI---DGLDGRSLLTRMKA-VAHIVKNVNPDILFLQEV 53 (256)
T ss_dssp EEEC---CTTCCTTHHHHHHH-HHHHHHHHCCSEEEEEEE
T ss_pred EEec---CCCCCcCHHHHHHH-HHHHHHHcCCCEEEEEec
Confidence 4455 24434344444443 445788899999999863
No 70
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=21.94 E-value=97 Score=31.00 Aligned_cols=54 Identities=20% Similarity=0.188 Sum_probs=36.8
Q ss_pred HHHHhHhhcCCcEEEEecCC-CCCCCCCCCccccCHHHHHHHHHHHH-hcCCCEEEEeCCCCCcch
Q 017454 241 IISKVVETYAPGAIVLQCGA-DSLAGDRLGCFNLSIDGHAECVRFVK-KFNLPLLVTGGGGYTKEN 304 (371)
Q Consensus 241 ~l~~~~~~f~Pd~IvvsaG~-D~~~~Dplg~~~ls~~g~~~~~~~l~-~~~~p~~~~leGGY~~~~ 304 (371)
.|..+.+.|+|++|+|.... -...||.+. .+.+.+. ..+.||+.+--.||....
T Consensus 79 ~I~~~~~~~~P~~I~V~tTC~~e~IGdDi~----------~v~~~~~~~~g~pVi~v~tpgf~g~~ 134 (511)
T 2xdq_B 79 NIIRKDTEEHPDLIVLTPTCTSSILQEDLQ----------NFVRRASLSTTADVLLADVNHYRVNE 134 (511)
T ss_dssp HHHHHHHHHCCSEEEEECCHHHHTTCCCHH----------HHHHHHHHHCSSEEEECCCCTTTCCH
T ss_pred HHHHHHHhcCCCEEEEeCCcHHHHhccCHH----------HHHHHhhhccCCCEEEeeCCCcccch
Confidence 34455677999998887664 556666442 2334333 458999999999998754
No 71
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=21.79 E-value=2.4e+02 Score=25.26 Aligned_cols=67 Identities=16% Similarity=0.184 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCCC----CCCccc---cCHHHHHHHHHHHHhcCCCEEEEe
Q 017454 231 DTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAGD----RLGCFN---LSIDGHAECVRFVKKFNLPLLVTG 296 (371)
Q Consensus 231 D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~D----plg~~~---ls~~g~~~~~~~l~~~~~p~~~~l 296 (371)
+.+.+..+.+.+..+-..-...+||+ ++|.|...-. +..... -....+..+.+.+..+..|+|...
T Consensus 36 ~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 115 (267)
T 3oc7_A 36 STALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAI 115 (267)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 55666667777766544333456655 5666654321 111000 001223445666777899999766
Q ss_pred C
Q 017454 297 G 297 (371)
Q Consensus 297 e 297 (371)
.
T Consensus 116 ~ 116 (267)
T 3oc7_A 116 D 116 (267)
T ss_dssp C
T ss_pred c
Confidence 3
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=21.68 E-value=1.4e+02 Score=24.72 Aligned_cols=20 Identities=15% Similarity=0.071 Sum_probs=13.7
Q ss_pred HHHhCCcEEEEeccCCCChhh
Q 017454 159 LLKYHARVLYIDIDVHHGDGV 179 (371)
Q Consensus 159 l~~~~~RVlivD~DvHHGnGt 179 (371)
|.++.+||++||.|. +++-+
T Consensus 26 la~~g~~vlliD~D~-~~~~~ 45 (206)
T 4dzz_A 26 LSRSGYNIAVVDTDP-QMSLT 45 (206)
T ss_dssp HHHTTCCEEEEECCT-TCHHH
T ss_pred HHHCCCeEEEEECCC-CCCHH
Confidence 334568999999993 34433
No 73
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=21.61 E-value=2e+02 Score=25.39 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCCC---CCCccccCHHHHHHHHHHHHhcCCCEEEEeC
Q 017454 229 IDDTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAGD---RLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297 (371)
Q Consensus 229 ~~D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~D---plg~~~ls~~g~~~~~~~l~~~~~p~~~~le 297 (371)
.=+.+.+..+.+.+..+-+. +..+||+ ++|.|.-.-. +-.... ....+..+.+.+..+.+|+|....
T Consensus 27 al~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~kPvIAav~ 103 (233)
T 3r6h_A 27 VLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAID-MLRGGFELSYRLLSYPKPVVIACT 103 (233)
T ss_dssp CCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHH-HHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHH-HHHHHHHHHHHHHhCCCCEEEEEC
Confidence 34566677777777665444 4556666 3444432111 100000 011123455667778999998764
No 74
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=21.32 E-value=2.8e+02 Score=26.14 Aligned_cols=64 Identities=9% Similarity=0.141 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhHhhcC--CcEEEEecCCCCCCCCCCCccccCHH----HHHHHHHHHHhcCC-CEEEEeCCCCCcc
Q 017454 233 SFTRLFKTIISKVVETYA--PGAIVLQCGADSLAGDRLGCFNLSID----GHAECVRFVKKFNL-PLLVTGGGGYTKE 303 (371)
Q Consensus 233 ~y~~~~~~~l~~~~~~f~--Pd~IvvsaG~D~~~~Dplg~~~ls~~----g~~~~~~~l~~~~~-p~~~~leGGY~~~ 303 (371)
.+...+.+.+..++++|+ |+.|++..+ ..|.+. .+.. .+.++.+.+++.+. .+|++.+-+|+..
T Consensus 117 ~~~~~~~~~w~~iA~ryk~~~~~Vi~el~-----NEP~~~--~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~~~ 187 (345)
T 3jug_A 117 SDLDRAVDYWIEMKDALIGKEDTVIINIA-----NEWYGS--WDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQY 187 (345)
T ss_dssp HHHHHHHHHHHHTHHHHTTCTTTEEEECC-----TTCCCS--SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTB
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEEec-----CCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcccc
Confidence 355666666667777774 456666665 677763 3333 34456677777754 3566655567653
No 75
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=21.27 E-value=1.6e+02 Score=25.42 Aligned_cols=41 Identities=15% Similarity=0.268 Sum_probs=23.0
Q ss_pred EEeecCCCCCChHHHHHHHHHHHHHhHhhcCC-cEEEEecCC-CCC
Q 017454 220 AINVPLKDGIDDTSFTRLFKTIISKVVETYAP-GAIVLQCGA-DSL 263 (371)
Q Consensus 220 ~vNvPL~~g~~D~~y~~~~~~~l~~~~~~f~P-d~IvvsaG~-D~~ 263 (371)
.+|..+.. -+-..++.. ..+..++...+| |+|+++.|. |+.
T Consensus 35 v~N~gi~G-~tt~~~~~~--~r~~~~l~~~~~~d~ViI~~G~ND~~ 77 (233)
T 1k7c_A 35 VVNDAVAG-RSARSYTRE--GRFENIADVVTAGDYVIVEFGHNDGG 77 (233)
T ss_dssp EEECCCTT-CCHHHHHHT--THHHHHHHHCCTTCEEEECCCTTSCS
T ss_pred EEecccCC-ccHHHHHHc--ccHHHHHhhCCCCCEEEEEccCCCCC
Confidence 34655533 334455431 123344555666 999999998 444
No 76
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=21.22 E-value=76 Score=28.18 Aligned_cols=23 Identities=17% Similarity=0.004 Sum_probs=16.2
Q ss_pred HhCCcEEEEeccCCCChhhHHhhh
Q 017454 161 KYHARVLYIDIDVHHGDGVEEAFY 184 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGnGtq~~f~ 184 (371)
+..+||++||.|...++=+ ..|.
T Consensus 45 ~~G~~VlliD~D~~~~~l~-~~l~ 67 (262)
T 2ph1_A 45 RQGKKVGILDADFLGPSIP-ILFG 67 (262)
T ss_dssp HTTCCEEEEECCSSCCHHH-HHTT
T ss_pred HCCCeEEEEeCCCCCCCHH-HHhc
Confidence 4568999999999765533 3443
No 77
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=20.99 E-value=1.8e+02 Score=27.65 Aligned_cols=52 Identities=19% Similarity=0.369 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHhHhhcCCcEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 017454 231 DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300 (371)
Q Consensus 231 D~~y~~~~~~~l~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~ls~~g~~~~~~~l~~~~~p~~~~leGGY 300 (371)
.+..-.++. -+.+++++++||+|++.- |+...+ . ....+..++|++ ..++|-
T Consensus 76 ~~~~~~~~~-~l~~~l~~~kPD~Vlv~g-------d~~~~~-------a--alaA~~~~IPv~-h~eagl 127 (385)
T 4hwg_A 76 AKSIGLVIE-KVDEVLEKEKPDAVLFYG-------DTNSCL-------S--AIAAKRRKIPIF-HMEAGN 127 (385)
T ss_dssp HHHHHHHHH-HHHHHHHHHCCSEEEEES-------CSGGGG-------G--HHHHHHTTCCEE-EESCCC
T ss_pred HHHHHHHHH-HHHHHHHhcCCcEEEEEC-------CchHHH-------H--HHHHHHhCCCEE-EEeCCC
Confidence 333334443 456788999999999863 332211 1 122346789965 557774
No 78
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.92 E-value=73 Score=28.89 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=14.2
Q ss_pred HhCCcEEEEeccCCCCh
Q 017454 161 KYHARVLYIDIDVHHGD 177 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGn 177 (371)
+..+||++||.|...++
T Consensus 109 ~~G~rVLLID~D~~~~~ 125 (271)
T 3bfv_A 109 QAGYKTLIVDGDMRKPT 125 (271)
T ss_dssp HTTCCEEEEECCSSSCC
T ss_pred hCCCeEEEEeCCCCCcc
Confidence 35689999999998764
No 79
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=20.79 E-value=2.8e+02 Score=24.79 Aligned_cols=69 Identities=13% Similarity=0.057 Sum_probs=34.6
Q ss_pred CChHHHHHHHHHHHHHhHhhcCCcEEEE-------ecCCCCCCCCCCCccccC---HHHHHHHHHHHHhcCCCEEEEeC
Q 017454 229 IDDTSFTRLFKTIISKVVETYAPGAIVL-------QCGADSLAGDRLGCFNLS---IDGHAECVRFVKKFNLPLLVTGG 297 (371)
Q Consensus 229 ~~D~~y~~~~~~~l~~~~~~f~Pd~Ivv-------saG~D~~~~Dplg~~~ls---~~g~~~~~~~l~~~~~p~~~~le 297 (371)
.=+.+.+..+.+.+..+-..-...+||+ ++|.|...-.....-... ...+..+.+.+..+..|+|....
T Consensus 28 al~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 106 (261)
T 3pea_A 28 AMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIH 106 (261)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 3355667777777766544334456666 345554321111100000 01112345567778999987763
No 80
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=20.68 E-value=35 Score=28.77 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=26.9
Q ss_pred HhhcCCcEEEEecCC-CCCCCCCCCccccCHHHH----HHHHHHHHhcC--CCEEEEe
Q 017454 246 VETYAPGAIVLQCGA-DSLAGDRLGCFNLSIDGH----AECVRFVKKFN--LPLLVTG 296 (371)
Q Consensus 246 ~~~f~Pd~IvvsaG~-D~~~~Dplg~~~ls~~g~----~~~~~~l~~~~--~p~~~~l 296 (371)
+...+||+|+++.|. |... ..+.+.| .++++.+++.+ .+++++.
T Consensus 81 ~~~~~pd~vvi~~G~ND~~~-------~~~~~~~~~~l~~~i~~l~~~~p~~~iil~~ 131 (214)
T 2hsj_A 81 LYGGAVDKIFLLIGTNDIGK-------DVPVNEALNNLEAIIQSVARDYPLTEIKLLS 131 (214)
T ss_dssp CCCSCCCEEEEECCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHhcCCCEEEEEEecCcCCc-------CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 445799999999996 3322 2344444 45566666655 5555553
No 81
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=20.47 E-value=65 Score=29.58 Aligned_cols=17 Identities=41% Similarity=0.616 Sum_probs=14.0
Q ss_pred HhCCcEEEEeccCCCCh
Q 017454 161 KYHARVLYIDIDVHHGD 177 (371)
Q Consensus 161 ~~~~RVlivD~DvHHGn 177 (371)
+..+||++||.|...++
T Consensus 119 ~~G~rVLLID~D~~~~~ 135 (286)
T 3la6_A 119 QTNKRVLLIDCDMRKGY 135 (286)
T ss_dssp TTTCCEEEEECCTTTCC
T ss_pred hCCCCEEEEeccCCCCC
Confidence 34689999999998764
No 82
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=20.43 E-value=1.8e+02 Score=28.38 Aligned_cols=69 Identities=12% Similarity=0.168 Sum_probs=44.3
Q ss_pred HHHHHHHhHhhcCCcEEEEecC-CCCCCCCCCCccccCHHHHHHHHHHHH-hcCCCEEEEeCCCCCcchHHHHHHHHHhh
Q 017454 238 FKTIISKVVETYAPGAIVLQCG-ADSLAGDRLGCFNLSIDGHAECVRFVK-KFNLPLLVTGGGGYTKENVARCWTVETGI 315 (371)
Q Consensus 238 ~~~~l~~~~~~f~Pd~IvvsaG-~D~~~~Dplg~~~ls~~g~~~~~~~l~-~~~~p~~~~leGGY~~~~~a~~~~~~~~~ 315 (371)
+++.+..+.+.|+|++|+|... .-...||.+ ..+.+.+. +.++|++.+--.||... ...++......
T Consensus 85 L~~~i~~~~~~~~P~~I~v~~TC~~~iIGdDi----------~~v~~~~~~~~~ipVi~v~~~Gf~~~-~~~G~~~a~~a 153 (460)
T 2xdq_A 85 LKRLCLEIKRDRNPSVIVWIGTCTTEIIKMDL----------EGLAPKLEAEIGIPIVVARANGLDYA-FTQGEDTVLAA 153 (460)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECHHHHHTTCCH----------HHHHHHHHHHHSSCEEEEECCTTTCC-TTHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCHHHHHhhCH----------HHHHHHHhhccCCcEEEEecCCcccc-HHHHHHHHHHH
Confidence 4566777888899999876543 344444432 33444443 45899999999999863 45555544444
Q ss_pred hh
Q 017454 316 LL 317 (371)
Q Consensus 316 ll 317 (371)
++
T Consensus 154 l~ 155 (460)
T 2xdq_A 154 MA 155 (460)
T ss_dssp HH
T ss_pred HH
Confidence 44
Done!