Query 017456
Match_columns 371
No_of_seqs 196 out of 420
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 08:44:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017456.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017456hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234 Predicted UDP-galactos 99.9 8.2E-21 1.8E-25 184.9 30.5 303 23-351 19-327 (345)
2 PF06027 DUF914: Eukaryotic pr 99.9 6.1E-20 1.3E-24 180.8 28.5 240 103-355 75-314 (334)
3 PF08449 UAA: UAA transporter 99.9 8.7E-20 1.9E-24 177.6 29.0 283 34-351 16-302 (303)
4 PLN00411 nodulin MtN21 family 99.9 5.2E-19 1.1E-23 176.3 32.2 289 31-356 25-338 (358)
5 TIGR00817 tpt Tpt phosphate/ph 99.9 2.3E-19 4.9E-24 174.0 28.4 231 102-347 60-294 (302)
6 PF04142 Nuc_sug_transp: Nucle 99.8 2E-17 4.4E-22 156.8 22.5 221 104-337 14-244 (244)
7 PTZ00343 triose or hexose phos 99.8 5.5E-16 1.2E-20 154.2 32.3 293 19-347 49-349 (350)
8 TIGR00950 2A78 Carboxylate/Ami 99.8 7.7E-16 1.7E-20 145.0 27.8 204 115-341 55-259 (260)
9 PRK11272 putative DMT superfam 99.7 5.5E-15 1.2E-19 142.9 31.8 280 14-346 3-285 (292)
10 KOG2765 Predicted membrane pro 99.7 1.5E-16 3.2E-21 155.6 20.6 236 105-355 157-399 (416)
11 PRK11453 O-acetylserine/cystei 99.7 1.2E-15 2.6E-20 148.1 25.3 213 119-347 71-288 (299)
12 PRK15430 putative chlorampheni 99.7 5.4E-15 1.2E-19 143.4 25.0 222 105-354 71-293 (296)
13 KOG1583 UDP-N-acetylglucosamin 99.7 3.9E-17 8.4E-22 154.1 8.6 218 121-344 78-312 (330)
14 PRK10532 threonine and homoser 99.7 2.8E-13 6.1E-18 131.2 30.5 214 105-348 69-283 (293)
15 TIGR03340 phn_DUF6 phosphonate 99.6 1.6E-13 3.5E-18 131.9 24.9 218 106-343 62-280 (281)
16 PRK11689 aromatic amino acid e 99.6 1.5E-13 3.2E-18 133.2 23.3 208 117-345 71-286 (295)
17 COG0697 RhaT Permeases of the 99.5 1.1E-10 2.5E-15 110.0 30.7 214 109-347 72-288 (292)
18 KOG1443 Predicted integral mem 99.4 1.7E-11 3.8E-16 117.6 19.9 220 110-344 87-313 (349)
19 TIGR00688 rarD rarD protein. T 99.4 9E-11 1.9E-15 111.1 22.9 99 106-217 69-167 (256)
20 COG2962 RarD Predicted permeas 99.4 1.3E-10 2.9E-15 111.1 23.4 218 103-355 68-292 (293)
21 TIGR00776 RhaT RhaT L-rhamnose 99.4 2.8E-10 6.1E-15 110.5 25.6 221 104-344 56-286 (290)
22 PF03151 TPT: Triose-phosphate 99.3 4.1E-11 8.8E-16 104.2 15.6 150 197-346 1-153 (153)
23 KOG1582 UDP-galactose transpor 99.2 6E-10 1.3E-14 105.6 18.2 294 13-348 37-334 (367)
24 KOG3912 Predicted integral mem 99.2 2.6E-09 5.5E-14 101.8 20.8 306 20-345 5-333 (372)
25 KOG1580 UDP-galactose transpor 99.2 6E-10 1.3E-14 103.7 14.2 242 109-367 87-333 (337)
26 KOG1444 Nucleotide-sugar trans 99.1 2.5E-09 5.3E-14 103.7 17.6 225 112-353 82-307 (314)
27 KOG1441 Glucose-6-phosphate/ph 99.1 2.1E-10 4.5E-15 112.4 10.2 221 109-350 85-311 (316)
28 KOG4510 Permease of the drug/m 99.1 5.1E-11 1.1E-15 112.6 3.4 204 118-345 109-324 (346)
29 TIGR00803 nst UDP-galactose tr 99.1 1.9E-09 4.1E-14 100.2 13.7 202 132-344 3-222 (222)
30 KOG1581 UDP-galactose transpor 98.9 4.7E-08 1E-12 94.2 16.9 223 109-347 85-314 (327)
31 PF13536 EmrE: Multidrug resis 98.8 1.4E-08 3E-13 85.0 8.8 78 105-183 32-110 (113)
32 COG5006 rhtA Threonine/homoser 98.8 7E-07 1.5E-11 84.3 18.5 208 105-342 69-278 (292)
33 KOG1442 GDP-fucose transporter 98.7 7.2E-09 1.6E-13 98.5 3.4 235 109-365 108-345 (347)
34 PF00892 EamA: EamA-like trans 98.7 2.3E-07 5.1E-12 76.6 10.6 120 33-178 5-125 (126)
35 KOG4314 Predicted carbohydrate 98.6 1.2E-06 2.7E-11 80.0 12.9 213 112-347 58-277 (290)
36 PF06800 Sugar_transport: Suga 98.3 7.7E-05 1.7E-09 71.8 19.1 114 103-217 41-159 (269)
37 KOG2766 Predicted membrane pro 98.3 1.1E-07 2.3E-12 89.9 -1.7 212 110-345 81-298 (336)
38 COG5070 VRG4 Nucleotide-sugar 98.2 2.2E-05 4.7E-10 73.2 11.4 209 121-347 82-297 (309)
39 PRK15051 4-amino-4-deoxy-L-ara 98.2 1.8E-05 3.9E-10 66.4 9.9 64 115-178 45-108 (111)
40 PLN00411 nodulin MtN21 family 98.1 0.00014 3.1E-09 72.9 16.1 71 113-183 262-332 (358)
41 PF05653 Mg_trans_NIPA: Magnes 98.0 6.7E-05 1.4E-09 73.6 12.3 79 102-183 48-126 (300)
42 TIGR00950 2A78 Carboxylate/Ami 98.0 0.00016 3.5E-09 67.9 14.2 70 105-174 189-259 (260)
43 PF03151 TPT: Triose-phosphate 97.9 0.00028 6E-09 61.1 12.7 131 33-176 14-150 (153)
44 COG2510 Predicted membrane pro 97.8 1.2E-05 2.5E-10 68.9 3.0 77 102-178 62-138 (140)
45 PRK11689 aromatic amino acid e 97.8 0.00039 8.4E-09 67.5 14.1 75 105-179 213-287 (295)
46 PRK10532 threonine and homoser 97.8 0.00082 1.8E-08 65.1 16.1 70 111-180 212-282 (293)
47 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00036 7.8E-09 67.8 13.0 75 105-179 209-288 (290)
48 PRK13499 rhamnose-proton sympo 97.7 0.019 4E-07 57.5 24.2 111 102-212 68-190 (345)
49 TIGR03340 phn_DUF6 phosphonate 97.7 0.00014 3E-09 69.9 8.1 72 106-177 210-281 (281)
50 PRK11272 putative DMT superfam 97.6 0.0018 3.9E-08 62.7 14.4 75 105-179 210-285 (292)
51 COG2076 EmrE Membrane transpor 97.6 0.00057 1.2E-08 56.9 9.1 63 118-180 41-104 (106)
52 PRK10452 multidrug efflux syst 97.6 0.00063 1.4E-08 58.0 9.6 70 113-182 36-106 (120)
53 PRK15430 putative chlorampheni 97.5 0.0018 4E-08 62.8 13.6 71 108-178 214-284 (296)
54 PRK10650 multidrug efflux syst 97.5 0.00083 1.8E-08 56.3 9.5 63 115-177 43-106 (109)
55 PRK11431 multidrug efflux syst 97.5 0.00092 2E-08 55.7 9.8 62 117-178 39-101 (105)
56 COG2510 Predicted membrane pro 97.5 0.0015 3.3E-08 56.1 11.2 129 198-343 5-136 (140)
57 PRK09541 emrE multidrug efflux 97.5 0.0012 2.7E-08 55.4 10.4 64 117-180 40-104 (110)
58 TIGR00688 rarD rarD protein. T 97.4 0.011 2.3E-07 55.9 16.4 137 196-345 2-141 (256)
59 PRK11453 O-acetylserine/cystei 97.3 0.0065 1.4E-07 59.0 14.9 79 103-181 210-289 (299)
60 PRK02971 4-amino-4-deoxy-L-ara 97.3 0.0019 4.1E-08 55.8 9.6 66 115-180 56-123 (129)
61 PF00892 EamA: EamA-like trans 97.3 0.0024 5.2E-08 52.3 9.8 36 311-346 90-126 (126)
62 TIGR00817 tpt Tpt phosphate/ph 97.2 0.0024 5.3E-08 61.9 10.0 60 119-178 233-292 (302)
63 KOG2922 Uncharacterized conser 96.9 0.0022 4.8E-08 62.9 7.0 68 118-185 75-142 (335)
64 PF13536 EmrE: Multidrug resis 96.9 0.034 7.3E-07 46.2 12.8 41 311-351 70-111 (113)
65 PTZ00343 triose or hexose phos 96.7 0.0074 1.6E-07 60.3 9.0 67 112-178 281-347 (350)
66 COG0697 RhaT Permeases of the 96.5 0.017 3.7E-07 54.2 9.9 78 103-180 210-288 (292)
67 COG2962 RarD Predicted permeas 96.5 0.065 1.4E-06 52.1 13.7 132 195-344 6-142 (293)
68 PF00893 Multi_Drug_Res: Small 96.4 0.011 2.4E-07 47.9 6.5 54 116-169 38-92 (93)
69 PRK13499 rhamnose-proton sympo 96.1 0.15 3.3E-06 51.1 14.0 76 104-180 257-342 (345)
70 TIGR00803 nst UDP-galactose tr 95.8 0.061 1.3E-06 49.8 9.3 64 117-181 9-72 (222)
71 COG5006 rhtA Threonine/homoser 95.7 0.05 1.1E-06 52.0 8.3 74 102-175 204-278 (292)
72 PF06379 RhaT: L-rhamnose-prot 95.5 0.27 5.8E-06 49.0 12.9 170 21-211 6-188 (344)
73 PF08449 UAA: UAA transporter 95.2 0.46 1E-05 46.2 13.5 44 312-355 101-145 (303)
74 PRK10452 multidrug efflux syst 94.6 0.83 1.8E-05 39.0 11.9 36 309-344 66-101 (120)
75 COG2076 EmrE Membrane transpor 94.0 0.91 2E-05 37.9 10.6 68 274-344 34-101 (106)
76 PF06800 Sugar_transport: Suga 93.5 0.9 1.9E-05 44.0 11.1 60 108-167 196-255 (269)
77 PF04657 DUF606: Protein of un 93.4 3.6 7.8E-05 35.7 13.9 123 198-342 3-137 (138)
78 PF06027 DUF914: Eukaryotic pr 93.3 2.1 4.6E-05 42.8 13.7 69 283-352 89-157 (334)
79 PF05653 Mg_trans_NIPA: Magnes 93.0 0.97 2.1E-05 44.4 10.8 36 311-346 87-122 (300)
80 PRK09541 emrE multidrug efflux 92.5 2.3 5E-05 35.6 10.9 36 309-344 66-101 (110)
81 PF10639 UPF0546: Uncharacteri 92.4 0.19 4.1E-06 42.4 4.2 60 117-176 51-111 (113)
82 PRK10650 multidrug efflux syst 92.3 2.7 5.8E-05 35.3 11.0 64 277-343 42-105 (109)
83 PRK15051 4-amino-4-deoxy-L-ara 92.2 1.2 2.5E-05 37.3 8.8 33 312-344 74-107 (111)
84 PRK11431 multidrug efflux syst 91.5 3 6.5E-05 34.7 10.4 36 309-344 65-100 (105)
85 PRK02971 4-amino-4-deoxy-L-ara 90.4 2.4 5.2E-05 36.5 9.2 32 314-345 88-121 (129)
86 PF04142 Nuc_sug_transp: Nucle 86.5 1.2 2.5E-05 42.5 5.1 48 305-352 48-95 (244)
87 PF07857 DUF1632: CEO family ( 85.5 2.2 4.8E-05 41.0 6.4 51 197-255 1-51 (254)
88 COG4975 GlcU Putative glucose 84.0 0.062 1.4E-06 51.2 -4.7 116 102-218 54-174 (288)
89 KOG1580 UDP-galactose transpor 82.2 4.7 0.0001 38.6 6.9 56 119-174 253-308 (337)
90 KOG2765 Predicted membrane pro 81.5 12 0.00025 38.1 9.8 71 109-181 322-392 (416)
91 PF04657 DUF606: Protein of un 81.4 35 0.00076 29.5 13.3 106 45-175 27-137 (138)
92 PF00893 Multi_Drug_Res: Small 79.1 3.7 7.9E-05 33.1 4.6 29 309-337 65-93 (93)
93 PF06379 RhaT: L-rhamnose-prot 79.1 60 0.0013 32.7 13.8 75 104-179 256-340 (344)
94 KOG1441 Glucose-6-phosphate/ph 77.7 0.91 2E-05 45.0 0.7 64 115-178 243-306 (316)
95 KOG1583 UDP-N-acetylglucosamin 77.5 17 0.00036 35.7 9.1 57 121-178 257-313 (330)
96 KOG4510 Permease of the drug/m 75.3 0.58 1.3E-05 45.3 -1.3 54 303-356 125-179 (346)
97 PF04246 RseC_MucC: Positive r 71.4 7.3 0.00016 33.4 4.7 53 303-355 69-121 (135)
98 COG4975 GlcU Putative glucose 71.3 1.6 3.5E-05 41.8 0.7 74 105-178 207-284 (288)
99 COG3238 Uncharacterized protei 68.6 86 0.0019 27.9 12.8 123 196-342 5-142 (150)
100 KOG2922 Uncharacterized conser 67.2 0.76 1.6E-05 45.5 -2.6 36 309-344 99-134 (335)
101 KOG1581 UDP-galactose transpor 65.5 7.6 0.00017 38.3 3.9 70 104-176 241-310 (327)
102 KOG1623 Multitransmembrane pro 60.5 51 0.0011 31.6 8.4 73 140-216 76-148 (243)
103 KOG1444 Nucleotide-sugar trans 53.4 2.4E+02 0.0053 28.1 13.4 134 202-349 14-152 (314)
104 KOG4314 Predicted carbohydrate 53.1 6.6 0.00014 36.7 1.1 38 309-346 88-125 (290)
105 PF11139 DUF2910: Protein of u 52.1 1.9E+02 0.0041 26.5 11.3 26 104-129 112-137 (214)
106 COG5070 VRG4 Nucleotide-sugar 47.9 68 0.0015 30.7 6.9 77 102-178 219-295 (309)
107 PF07857 DUF1632: CEO family ( 45.9 2.3E+02 0.0049 27.3 10.4 113 109-221 57-208 (254)
108 COG2211 MelB Na+/melibiose sym 44.9 4E+02 0.0086 28.1 17.1 52 127-178 266-320 (467)
109 PF11361 DUF3159: Protein of u 43.9 2.4E+02 0.0053 25.9 9.8 50 196-255 25-74 (187)
110 PF05884 ZYG-11_interact: Inte 43.0 3.4E+02 0.0074 26.8 19.4 128 9-169 94-225 (299)
111 PF15108 TMEM37: Voltage-depen 41.1 1E+02 0.0022 27.7 6.5 78 165-248 93-170 (184)
112 PRK10862 SoxR reducing system 38.3 43 0.00093 29.6 3.9 13 341-353 115-127 (154)
113 PF05297 Herpes_LMP1: Herpesvi 38.2 11 0.00023 37.0 0.0 126 118-256 35-163 (381)
114 PRK10473 multidrug efflux syst 37.3 4E+02 0.0086 25.9 14.0 34 26-62 135-168 (392)
115 PF10639 UPF0546: Uncharacteri 37.3 99 0.0022 26.1 5.7 31 312-342 80-110 (113)
116 COG3086 RseC Positive regulato 35.8 86 0.0019 27.8 5.2 7 309-315 82-88 (150)
117 PF07690 MFS_1: Major Facilita 34.2 3.9E+02 0.0084 24.9 13.9 26 21-46 124-149 (352)
118 PRK01844 hypothetical protein; 33.6 62 0.0013 25.2 3.5 28 17-44 4-31 (72)
119 COG0341 SecF Preprotein transl 32.7 5E+02 0.011 25.7 12.8 76 156-255 129-204 (305)
120 PF13038 DUF3899: Domain of un 32.7 36 0.00079 27.0 2.3 19 331-349 7-25 (92)
121 PF11368 DUF3169: Protein of u 32.1 1.2E+02 0.0026 28.7 6.1 15 27-41 19-33 (248)
122 PF13347 MFS_2: MFS/sugar tran 30.7 4.7E+02 0.01 26.0 10.6 16 154-169 282-297 (428)
123 PRK14397 membrane protein; Pro 30.6 4.7E+02 0.01 24.7 12.5 18 249-270 87-104 (222)
124 PRK14409 membrane protein; Pro 30.6 4.5E+02 0.0097 24.5 11.5 18 249-270 88-105 (205)
125 PRK02935 hypothetical protein; 29.3 65 0.0014 26.9 3.2 55 156-210 6-60 (110)
126 PF09527 ATPase_gene1: Putativ 29.1 1.3E+02 0.0029 21.4 4.6 44 309-352 10-54 (55)
127 PRK00523 hypothetical protein; 29.0 82 0.0018 24.5 3.5 28 17-44 5-32 (72)
128 PF15471 TMEM171: Transmembran 28.9 46 0.00099 32.4 2.6 28 328-355 161-188 (319)
129 PRK02237 hypothetical protein; 28.9 1.1E+02 0.0024 25.7 4.6 33 149-181 75-107 (109)
130 PF04342 DUF486: Protein of un 28.6 81 0.0018 26.4 3.7 29 312-340 74-102 (108)
131 PF04971 Lysis_S: Lysis protei 27.8 59 0.0013 25.0 2.5 30 324-353 26-58 (68)
132 PRK10734 putative calcium/sodi 27.5 1.3E+02 0.0027 30.0 5.6 31 320-350 118-148 (325)
133 PF10361 DUF2434: Protein of u 26.3 5.6E+02 0.012 25.3 9.5 56 233-299 88-143 (296)
134 PF11023 DUF2614: Protein of u 25.6 1E+02 0.0022 26.1 3.8 58 156-214 5-63 (114)
135 PF09930 DUF2162: Predicted tr 24.8 6E+02 0.013 24.0 14.5 21 323-343 154-174 (224)
136 PF15061 DUF4538: Domain of un 24.6 73 0.0016 23.7 2.5 16 329-344 8-23 (58)
137 PF04342 DUF486: Protein of un 24.5 87 0.0019 26.2 3.2 30 146-176 75-104 (108)
138 KOG4026 Uncharacterized conser 24.2 6E+02 0.013 23.8 9.3 24 231-254 109-132 (207)
139 COG5546 Small integral membran 23.7 1.7E+02 0.0037 23.0 4.4 31 102-133 8-38 (80)
140 TIGR00780 ccoN cytochrome c ox 23.3 5.6E+02 0.012 26.9 9.7 25 231-255 379-403 (474)
141 PF02694 UPF0060: Uncharacteri 22.8 1.4E+02 0.0031 25.0 4.1 32 150-181 74-105 (107)
142 PF06570 DUF1129: Protein of u 22.6 5.9E+02 0.013 23.2 10.6 16 146-161 188-203 (206)
143 KOG1582 UDP-galactose transpor 22.2 1.7E+02 0.0037 28.9 5.1 47 132-178 285-331 (367)
144 PF15099 PIRT: Phosphoinositid 21.9 1.2E+02 0.0026 26.2 3.6 25 323-347 74-98 (129)
145 KOG4831 Unnamed protein [Funct 21.8 66 0.0014 27.1 2.0 56 121-176 66-122 (125)
146 PHA03049 IMV membrane protein; 20.8 96 0.0021 23.7 2.5 27 331-359 7-33 (68)
147 COG3238 Uncharacterized protei 20.4 4.4E+02 0.0095 23.4 7.0 69 105-176 70-143 (150)
148 PRK13108 prolipoprotein diacyl 20.3 1.2E+02 0.0027 31.7 4.1 30 326-355 254-283 (460)
No 1
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=8.2e-21 Score=184.92 Aligned_cols=303 Identities=17% Similarity=0.206 Sum_probs=219.2
Q ss_pred HHHHHHhhhchHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCC-CCCCCCCCCCCCCCCCCCCCCcccc
Q 017456 23 NIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRR-SGTTTDHESSTSSQPSNNDDNKLIL 101 (371)
Q Consensus 23 ~~~~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (371)
+.+.+.+=.++-+++.|+....+|.+.--+|.|..++.-++.++.+..+.+.|. .++ ..++ -++...
T Consensus 19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~-~~~~-----------l~~~i~ 86 (345)
T KOG2234|consen 19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKK-SLKS-----------LSKEIL 86 (345)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhh-hhhh-----------cCHHHH
Confidence 333444445677899999999889999999999999999999998887765432 100 0010 111111
Q ss_pred CCh-hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456 102 MRP-PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH 180 (371)
Q Consensus 102 ~~~-~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~ 180 (371)
-.| -.+-.++..++ ++.||.++..++.++|++|+++..|.+...|++|+.+++++|++++||.+++++++|+.++..+
T Consensus 87 ~~~~~~lk~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 87 AAPRETLKVSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred hChHHHHHHHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 223 23445555555 5555445557999999999999999999999999999999999999999999999999999854
Q ss_pred cCCCC-CC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHHHHHHccchh
Q 017456 181 TNGDR-PD-NESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVL-EIQMVMCLFATLVCTVGMVVNKDFQ 257 (371)
Q Consensus 181 ~~s~~-~~-~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vl-e~q~~~slvat~~~~vg~~~~g~~~ 257 (371)
..+.. +. +....+...|+...++++.++|+-.+ .+||+.|+...+.++ .+|. ++++.++.+++.... |++
T Consensus 166 ~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgv----YfEkiLK~s~~s~wi~NiqL--~~~g~~f~~l~~~~~-d~~ 238 (345)
T KOG2234|consen 166 SLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGV----YFEKILKGSNVSLWIRNIQL--YFFGILFNLLTILLQ-DGE 238 (345)
T ss_pred CCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHH----HHHHHHhcCCchHHHHHHHH--HHHHHHHHHHHHhhc-ccc
Confidence 43221 12 34567789999999999999999555 567776665555555 6775 467888888888777 555
Q ss_pred hhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhh-hhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHH
Q 017456 258 AIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGV-IYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLAL 336 (371)
Q Consensus 258 ~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Gl-v~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~L 336 (371)
... ..+|++|.... +|..+..++..=-++.+ +.+++++.+++..++.+.+++++++.+|+-++|..-.+|..+
T Consensus 239 ~i~--~~gff~G~s~~----vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~l 312 (345)
T KOG2234|consen 239 AIN--EYGFFYGYSSI----VWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALL 312 (345)
T ss_pred ccc--cCCccccccHH----HHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHH
Confidence 555 45788886433 33333333322113334 448999999999888888899999999999999999999999
Q ss_pred HHHHHHHHHhccccc
Q 017456 337 SLWGFASYFYGEIKN 351 (371)
Q Consensus 337 vl~G~~~y~y~~~~~ 351 (371)
++.....|.+.+++|
T Consensus 313 Vi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 313 VILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHhhcCCccc
Confidence 996666666555555
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.87 E-value=6.1e-20 Score=180.81 Aligned_cols=240 Identities=17% Similarity=0.246 Sum_probs=170.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccC
Q 017456 103 RPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTN 182 (371)
Q Consensus 103 ~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~ 182 (371)
.++.+.-|+.+|++-...|++...|++|+++++.+++.++..+|++++|++++|+|+++.|+.|+++.+.|++++...|.
T Consensus 75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~ 154 (334)
T PF06027_consen 75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV 154 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence 34667889999999999999999999999999999999999999999999999999999999999999999988887765
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhh
Q 017456 183 GDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKE 262 (371)
Q Consensus 183 s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e 262 (371)
..++++.++.+...||+++++|+++||++-.+.|+.. |+.+ ..|+..+.+++++++..+-..+- |++.+
T Consensus 155 ~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v----~~~~---~~~~lg~~Glfg~ii~~iq~~il-e~~~i--- 223 (334)
T PF06027_consen 155 LSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLV----KKAP---RVEFLGMLGLFGFIISGIQLAIL-ERSGI--- 223 (334)
T ss_pred cccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhc----ccCC---HHHHHHHHHHHHHHHHHHHHHhe-ehhhh---
Confidence 4322223445679999999999999999777765544 3333 34777777888887776544332 33333
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456 263 ARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFA 342 (371)
Q Consensus 263 ~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~ 342 (371)
+.+++.+ ......++.+++-.+.+..+.-+...+++...|+-....-|.+.+..+++||+++++..++|.++++.|+.
T Consensus 224 -~~~~w~~-~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~v 301 (334)
T PF06027_consen 224 -ESIHWTS-QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFV 301 (334)
T ss_pred -hccCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhh
Confidence 1222111 11122222222222222222222233444333333223336677999999999999999999999999999
Q ss_pred HHHhccccchhhh
Q 017456 343 SYFYGEIKNKKKM 355 (371)
Q Consensus 343 ~y~y~~~~~~~k~ 355 (371)
.|...+-++++++
T Consensus 302 vy~~~~~~~~~~~ 314 (334)
T PF06027_consen 302 VYNLAESPEEEAR 314 (334)
T ss_pred eEEccCCcccccc
Confidence 9988876655433
No 3
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.87 E-value=8.7e-20 Score=177.55 Aligned_cols=283 Identities=15% Similarity=0.165 Sum_probs=208.9
Q ss_pred HHHHHHHHHhcCCc-chhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHHHH
Q 017456 34 GPLIMRLYFLHGGK-RIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAI 112 (371)
Q Consensus 34 ~~Ll~r~y~~~~g~-~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (371)
+.+..+..-.+.++ ..|.-|++|-+--.+...+.... .++++. ++.| . + -++.
T Consensus 16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~-~~~~~~-----------------~~~~---~--~---~~~~ 69 (303)
T PF08449_consen 16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSL-FKFPKS-----------------RKIP---L--K---KYAI 69 (303)
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHh-ccccCC-----------------CcCh---H--H---HHHH
Confidence 34555555555555 69999999995555433322221 110000 0111 1 2 4456
Q ss_pred HHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCc-ch
Q 017456 113 IGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNE-SA 191 (371)
Q Consensus 113 ~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~-s~ 191 (371)
.+++..+...+-..+++|+|.+++.++.++.++++++++++++|+|++++++.++++.++|+++...++.+++++.. .+
T Consensus 70 ~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~ 149 (303)
T PF08449_consen 70 LSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSS 149 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccccccc
Confidence 67777888888888999999999999999999999999999999999999999999999999998877765443222 22
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHH--ccchhhhhhhhhhhccc
Q 017456 192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVV--NKDFQAIGKEARAYTLG 269 (371)
Q Consensus 192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~--~g~~~~l~~e~~~f~~g 269 (371)
.....|+++.+.+.++.|+...+.|+.+++..++ ..|+.+|.++++.+.+.+.... .||+.+- ..+...
T Consensus 150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-----~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~----~~f~~~ 220 (303)
T PF08449_consen 150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKS-----PWELMFYTNLFSLPFLLILLFLLPTGEFRSA----IRFISA 220 (303)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH----HHHHHH
Confidence 2234499999999999999999999999887332 2699999999999988877777 6665421 112111
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccc
Q 017456 270 EGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEI 349 (371)
Q Consensus 270 ~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~ 349 (371)
....+..+..+.++-..+..++..++...+++..+++.+.+++++.++++++||+++++.+++|.++++.|...|.+.++
T Consensus 221 ~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 221 HPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 11122223444444445555566677788899999999999999999999999999999999999999999999988876
Q ss_pred cc
Q 017456 350 KN 351 (371)
Q Consensus 350 ~~ 351 (371)
++
T Consensus 301 k~ 302 (303)
T PF08449_consen 301 KK 302 (303)
T ss_pred cC
Confidence 54
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.86 E-value=5.2e-19 Score=176.35 Aligned_cols=289 Identities=14% Similarity=0.146 Sum_probs=175.0
Q ss_pred hchHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHH
Q 017456 31 NCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFAS 110 (371)
Q Consensus 31 ~~~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (371)
..+-.++.|.-+++|=+..-+..+=...+..+++ |+.+. ++|+. . .+ ..++|.+...
T Consensus 25 ~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll-~~~~~--~~~~~-----~------------~~---~~~~~~~~~l 81 (358)
T PLN00411 25 VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLL-PSLFF--TNRSR-----S------------LP---PLSVSILSKI 81 (358)
T ss_pred HHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHH-HHHHH--HHHhc-----c------------cC---cchHHHHHHH
Confidence 3355677888786666665555443343333332 22222 22111 0 01 1234555566
Q ss_pred HHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHH------hccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456 111 AIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLL------VKQKLTSYSLNAVFLLTLGAVVLGLHTNGD 184 (371)
Q Consensus 111 ~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~------~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~ 184 (371)
+++|++-...+.++.+|++|+|++.++++.+++|+|++++++++ +|||.+++++.|++++++|+.++..+++.+
T Consensus 82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~ 161 (358)
T PLN00411 82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPR 161 (358)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcc
Confidence 66776554556677789999999999999999999999999999 699999999999999999998877533210
Q ss_pred ---------------C-CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH-
Q 017456 185 ---------------R-PDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCT- 247 (371)
Q Consensus 185 ---------------~-~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~- 247 (371)
+ +...+..+..+|++++++|+++||+|..+.++..+|+ +. ...+.+|.++++.+++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~----~~--~~~~t~~~~~~~~~~~~~ 235 (358)
T PLN00411 162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY----PA--AFTVSFLYTVCVSIVTSM 235 (358)
T ss_pred cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----Cc--HhHHHHHHHHHHHHHHHH
Confidence 0 0111122346799999999999999998875554433 32 23555666666665555
Q ss_pred HHHHHccc-hhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCC
Q 017456 248 VGMVVNKD-FQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEK 325 (371)
Q Consensus 248 vg~~~~g~-~~~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~ 325 (371)
.+...+++ .+...... +..... ..+..+ .+.+.|.+...++.-+ +...++.. ....|+.+ +++++++||+
T Consensus 236 ~~l~~~~~~~~~~~~~~-~~~~~~-i~y~~i-~t~lay~lw~~~v~~~----ga~~as~~-~~L~PV~a~llg~l~LgE~ 307 (358)
T PLN00411 236 IGLVVEKNNPSVWIIHF-DITLIT-IVTMAI-ITSVYYVIHSWTVRHK----GPLYLAIF-KPLSILIAVVMGAIFLNDS 307 (358)
T ss_pred HHHHHccCCcccceecc-chHHHH-HHHHHH-HHHHHHHHHHHHHhcc----CchHHHHH-HhHHHHHHHHHHHHHhCCC
Confidence 45554432 11110000 000000 111112 2333443332332222 12122333 24459866 9999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHhccccchhhhh
Q 017456 326 FQAEKGVSLALSLWGFASYFYGEIKNKKKMK 356 (371)
Q Consensus 326 ~t~~k~ig~~Lvl~G~~~y~y~~~~~~~k~~ 356 (371)
+++.+++|+++++.|+.....++-+|+|.++
T Consensus 308 lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~~ 338 (358)
T PLN00411 308 LYLGCLIGGILITLGFYAVMWGKANEEKDQL 338 (358)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhhhhhhcc
Confidence 9999999999999999887765544444433
No 5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.86 E-value=2.3e-19 Score=173.96 Aligned_cols=231 Identities=10% Similarity=0.099 Sum_probs=158.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456 102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT 181 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~ 181 (371)
++++++...+..|++.+.+..+..+|++|+|+++++++.+++|+|+++++++++|||++++++.|+++.++|+++...+
T Consensus 60 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~- 138 (302)
T TIGR00817 60 ISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT- 138 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC-
Confidence 4567777888899988899999999999999999999999999999999999999999999999999999999765411
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhh
Q 017456 182 NGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGK 261 (371)
Q Consensus 182 ~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~ 261 (371)
+. .....|++++++|++.|++|..+.++..++. +. ...++..|....+.++++...+..++.+..+.
T Consensus 139 ~~--------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~--~~---~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 205 (302)
T TIGR00817 139 EL--------SFNWAGFLSAMISNITFVSRNIFSKKAMTIK--SL---DKTNLYAYISIMSLFLLSPPAFITEGPPFLPH 205 (302)
T ss_pred cc--------cccHHHHHHHHHHHHHHHHHHHHHHHhhccC--CC---CcccHHHHHHHHHHHHHHHHHHHHcchHHHHH
Confidence 11 1135799999999999999888865543310 21 22466677777777666654444333222222
Q ss_pred hhhhhc--cc-cchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHH
Q 017456 262 EARAYT--LG-EGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALS 337 (371)
Q Consensus 262 e~~~f~--~g-~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lv 337 (371)
+..... .. ...+...++.....+........-.+..+++...++..... |+.. +++++++||+++..+++|++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~-pv~~~~~~~~~lge~lt~~~~~G~~li 284 (302)
T TIGR00817 206 GFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK-RVVVIVVSILFFGTKISPQQVFGTGIA 284 (302)
T ss_pred HHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh-hhheeeeehhhcCCCCchhHHHHHHHH
Confidence 221110 01 01121122222211111111111123355666667774444 8866 9999999999999999999999
Q ss_pred HHHHHHHHhc
Q 017456 338 LWGFASYFYG 347 (371)
Q Consensus 338 l~G~~~y~y~ 347 (371)
+.|+..|.+.
T Consensus 285 l~Gv~l~~~~ 294 (302)
T TIGR00817 285 IAGVFLYSRV 294 (302)
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 6
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.79 E-value=2e-17 Score=156.84 Aligned_cols=221 Identities=24% Similarity=0.309 Sum_probs=163.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC
Q 017456 104 PPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG 183 (371)
Q Consensus 104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s 183 (371)
+|+.+.++.=.++++.+|.+...+++++|++++.++.|++.++|++++++++|+|++++||.|++++++|+++...++..
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 47777777778888888777778999999999999999999999999999999999999999999999999988765543
Q ss_pred CC--C-CC-----cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh-HHHHHHHHHHHHHHHHHHHHHHHcc
Q 017456 184 DR--P-DN-----ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYA-LVLEIQMVMCLFATLVCTVGMVVNK 254 (371)
Q Consensus 184 ~~--~-~~-----~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~-~vle~q~~~slvat~~~~vg~~~~g 254 (371)
++ + ++ ..+.+...|++++++++.+.|+-.++.|+..|+ ...+ .+-++|. ++.+.++.++.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~----~~~s~~~~N~qL--~~~gi~~~~~~~~~~- 166 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKR----SNVSLWIQNMQL--YLFGILFNLLALLLS- 166 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcc----cchhHHHHHHHH--HHHHHHHHHHHHhcc-
Confidence 21 1 11 123467899999999999999988887666654 2222 2335555 455666666555444
Q ss_pred chhhhhhhhhhhccccchhHHHHHHHHH-HHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHH
Q 017456 255 DFQAIGKEARAYTLGEGKYYAVVVASAL-IWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVS 333 (371)
Q Consensus 255 ~~~~l~~e~~~f~~g~~~y~~~lv~~av-~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig 333 (371)
|++...+ ++|++|.... +|..+ ...+.++.+.-+..+.+++.+++...+.+.++.++++++||.+++..-.+|
T Consensus 167 ~~~~~~~--~g~f~G~~~~----~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg 240 (244)
T PF04142_consen 167 DGSAISE--SGFFHGYSWW----VWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG 240 (244)
T ss_pred ccccccc--CCchhhcchH----HHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence 4433332 3566664322 23332 233334445556669999999999999989999999999999999998888
Q ss_pred HHHH
Q 017456 334 LALS 337 (371)
Q Consensus 334 ~~Lv 337 (371)
..++
T Consensus 241 ~~~V 244 (244)
T PF04142_consen 241 AALV 244 (244)
T ss_pred eecC
Confidence 7653
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.78 E-value=5.5e-16 Score=154.17 Aligned_cols=293 Identities=14% Similarity=0.060 Sum_probs=175.0
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHhcCCcchhHHHHHhhh-chhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCC
Q 017456 19 LLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETA-GCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDN 97 (371)
Q Consensus 19 ~~~~~~~~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~a-gfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (371)
.+.+.++.--..+....+..|.-.++ -+-+|.-++.|-. ++-+..+...+ +.++. +
T Consensus 49 ~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~---~~~~~-------------------~ 105 (350)
T PTZ00343 49 KLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT---GFRKI-------------------P 105 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh---CCCCC-------------------C
Confidence 33334444444555666666665544 3448888888863 34332222111 11111 0
Q ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 017456 98 KLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVL 177 (371)
Q Consensus 98 ~~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll 177 (371)
++ ...++.+.-.+..|++....+.....|++++|++.++++.++.|+|+++++++++|||++++++.++++.++|+.+.
T Consensus 106 ~~-~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~ 184 (350)
T PTZ00343 106 RI-KSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALA 184 (350)
T ss_pred CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhe
Confidence 00 00112333344445443333333347999999999999999999999999999999999999999999999998887
Q ss_pred hcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHH-Hccch
Q 017456 178 GLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMV-VNKDF 256 (371)
Q Consensus 178 ~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~-~~g~~ 256 (371)
..++. .....|++++++|++.+++|..+.++..++...+..-....++..+..+++.+.++...+ .++.
T Consensus 185 ~~~~~---------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~- 254 (350)
T PTZ00343 185 SVKEL---------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGK- 254 (350)
T ss_pred ecccc---------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhH-
Confidence 63211 114689999999999999999998777654321100112234444445666655553333 3331
Q ss_pred hhhhhhhh----hhcc-ccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhH
Q 017456 257 QAIGKEAR----AYTL-GEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEK 330 (371)
Q Consensus 257 ~~l~~e~~----~f~~-g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k 330 (371)
....... .+.. ........++.+.+.+.+.-....-.+..++.+..++...+. |++. +++++++||+++..+
T Consensus 255 -~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk-~V~~iv~s~l~~ge~lt~~~ 332 (350)
T PTZ00343 255 -KWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLK-RVVIIVSSIIIFQTQVTLLG 332 (350)
T ss_pred -HHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH-HHHHhhhhHHHhCCCCchHh
Confidence 1111000 0100 100111123333333333222222233455666677776655 7755 999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 017456 331 GVSLALSLWGFASYFYG 347 (371)
Q Consensus 331 ~ig~~Lvl~G~~~y~y~ 347 (371)
++|+++++.|+..|.+-
T Consensus 333 ~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 333 YLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999888653
No 8
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.76 E-value=7.7e-16 Score=144.98 Aligned_cols=204 Identities=18% Similarity=0.177 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhh
Q 017456 115 ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQY 194 (371)
Q Consensus 115 ~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~ 194 (371)
+..++++.+|.+|++|+|+++.+++.+++|+++++++.+++|||++++++.+++++++|+.++..+++. +.+
T Consensus 55 ~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--------~~~ 126 (260)
T TIGR00950 55 LQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--------SIN 126 (260)
T ss_pred HHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc--------ccc
Confidence 445788889989999999999999999999999999999999999999999999999999887633211 124
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhH
Q 017456 195 LVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY 274 (371)
Q Consensus 195 ~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~ 274 (371)
..|+++++.|++.|+.+..+.++..+ +.+.. ...+..|...++.+++..-....++.+.. +.+.+ ....+
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~----~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~---~~~~~ 196 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVK----KEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQW---GALLY 196 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhh----cCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHH---HHHHH
Confidence 68999999999999998888644433 22211 12222244556666655444444432211 11111 00112
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHH
Q 017456 275 AVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGF 341 (371)
Q Consensus 275 ~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~ 341 (371)
..++.+.+.+.+...++.- .+....+++.... |+ +.+++++++||+++..+++|+++++.|.
T Consensus 197 ~~~~~~~~~~~~~~~a~~~----~~~~~~s~~~~~~-pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 197 LGLIGTALAYFLWNKGLTL----VDPSAASILALAE-PLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHH-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 2234455555555444322 2332344554455 76 4599999999999999999999999875
No 9
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.74 E-value=5.5e-15 Score=142.94 Aligned_cols=280 Identities=14% Similarity=0.114 Sum_probs=167.9
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCC
Q 017456 14 TMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSN 93 (371)
Q Consensus 14 ~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (371)
.|+.+-+++..+++.+=-..+.+..|.-.+ +=+-.++.++=...+..+++ |++.. ++++
T Consensus 3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll-~~~~~---~~~~---------------- 61 (292)
T PRK11272 3 FRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLL-AFLLL---RGHP---------------- 61 (292)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHH-HHHHH---hCCC----------------
Confidence 344444444455555444578888996555 22334444433333444333 22221 2111
Q ss_pred CCCCccccCChhHHHHHHHHHHHH-HHHHHHHHhcc-CCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHH
Q 017456 94 NDDNKLILMRPPVFFASAIIGILT-GLDNYLYAYGV-ARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLT 171 (371)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~G~l~-~~~n~Ly~~gl-~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~ 171 (371)
. .++|++..+..+|++. +..+.++.++. +++|++.++++.+++|+|+++++++ +|||++++++.|+++++
T Consensus 62 --~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~ 133 (292)
T PRK11272 62 --L-----PTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGL 133 (292)
T ss_pred --C-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHH
Confidence 0 1234455556677654 44566666788 9999999999999999999999986 69999999999999999
Q ss_pred HHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 017456 172 LGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMV 251 (371)
Q Consensus 172 ~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~ 251 (371)
+|+.++..+++. +....|+++.++|+++||+|.... ||..++++ .....|...++.+.+..-..
T Consensus 134 ~Gv~ll~~~~~~--------~~~~~G~l~~l~a~~~~a~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 197 (292)
T PRK11272 134 AGIVLLNSGGNL--------SGNPWGAILILIASASWAFGSVWS----SRLPLPVG----MMAGAAEMLAAGVVLLIASL 197 (292)
T ss_pred HhHHHHhcCccc--------ccchHHHHHHHHHHHHHHHHHHHH----HhcCCCcc----hHHHHHHHHHHHHHHHHHHH
Confidence 998877543211 113579999999999999988775 44433222 12223333444443332222
Q ss_pred HccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhH
Q 017456 252 VNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEK 330 (371)
Q Consensus 252 ~~g~~~~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k 330 (371)
..++......+.+.+. ...++.++.+++.+.+...++.-+ ++-..++....+ |+.+ +++++++||+++..+
T Consensus 198 ~~~~~~~~~~~~~~~~---~i~~l~i~~s~~~~~l~~~~~~~~----~~~~~s~~~~l~-Pi~a~i~~~~~l~E~~t~~~ 269 (292)
T PRK11272 198 LSGERLTALPTLSGFL---ALGYLAVFGSIIAISAYMYLLRNV----RPALATSYAYVN-PVVAVLLGTGLGGETLSPIE 269 (292)
T ss_pred HcCCcccccCCHHHHH---HHHHHHHHHHHHHHHHHHHHHhhc----CHHHHHHHHHHH-HHHHHHHHHHHcCCCCcHHH
Confidence 3322111111111110 112233455666665555543322 222334444444 8755 999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 017456 331 GVSLALSLWGFASYFY 346 (371)
Q Consensus 331 ~ig~~Lvl~G~~~y~y 346 (371)
++|+++++.|......
T Consensus 270 iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 270 WLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988877543
No 10
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.74 E-value=1.5e-16 Score=155.59 Aligned_cols=236 Identities=15% Similarity=0.149 Sum_probs=172.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD 184 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~ 184 (371)
+..-.+..+..++.+-|+.|+.+++|++|++.+++.++.-.||..++.++..||+|+.|++++++.+.|++++..+++..
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 56678888899999999999999999999999999999999999999999999999999999999999998888776532
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH---HHHHc---cchh-
Q 017456 185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTV---GMVVN---KDFQ- 257 (371)
Q Consensus 185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~v---g~~~~---g~~~- 257 (371)
. ++....+..+|+++++.+|++||+|..+. ||-..++. .-++||.+.+.++..-+++ .+++- ++.+
T Consensus 237 ~-~~~~a~~~llG~llaL~sA~~YavY~vll----k~~~~~eg--~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F 309 (416)
T KOG2765|consen 237 N-SDLPASRPLLGNLLALLSALLYAVYTVLL----KRKIGDEG--ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF 309 (416)
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHHHHHHH----Hhhccccc--ccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc
Confidence 2 22344567899999999999999999984 33222221 1246777777776543332 22222 2100
Q ss_pred hhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHH
Q 017456 258 AIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALS 337 (371)
Q Consensus 258 ~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lv 337 (371)
.+|.. . +.......-++.++++=.+...+ +..++++...+-+++-+|+..+.-+++=|.++++..++|.+.+
T Consensus 310 ~lP~~---~-q~~~vv~~~ligtvvSDylW~~a----~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~I 381 (416)
T KOG2765|consen 310 ELPSS---T-QFSLVVFNNLIGTVVSDYLWAKA----VLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPI 381 (416)
T ss_pred cCCCC---c-eeEeeeHhhHHHHHHHHHHHHHH----HHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 22221 1 11111112266666665555555 2345566666666777899999999999999999999999999
Q ss_pred HHHHHHHHhccccchhhh
Q 017456 338 LWGFASYFYGEIKNKKKM 355 (371)
Q Consensus 338 l~G~~~y~y~~~~~~~k~ 355 (371)
+.||+...|....++|++
T Consensus 382 fv~Fv~vn~~~~~~~~~~ 399 (416)
T KOG2765|consen 382 FVGFVIVNISSENSKKDP 399 (416)
T ss_pred HHHHhheecccccccccc
Confidence 999999988776666554
No 11
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.73 E-value=1.2e-15 Score=148.10 Aligned_cols=213 Identities=15% Similarity=0.164 Sum_probs=142.1
Q ss_pred HHHHHHHhccCC-CChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhHHH
Q 017456 119 LDNYLYAYGVAR-LPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVG 197 (371)
Q Consensus 119 ~~n~Ly~~gl~y-lpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G 197 (371)
.+..++..+++| +|++.++++.+++|+++++++++++|||++++++.++++.++|+.++..++.++ + .....|
T Consensus 71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~---~---~~~~~G 144 (299)
T PRK11453 71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG---Q---HVAMLG 144 (299)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC---c---chhHHH
Confidence 444455568887 799999999999999999999999999999999999999999988776432111 1 113579
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH-HHHHHccchhhhhhhhhhhccc--cchhH
Q 017456 198 FLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCT-VGMVVNKDFQAIGKEARAYTLG--EGKYY 274 (371)
Q Consensus 198 ~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~-vg~~~~g~~~~l~~e~~~f~~g--~~~y~ 274 (371)
+++++.|+++|++|..+.++.. ++++....+.++++.++++.+++. .+...+++. ....+...+... ....+
T Consensus 145 ~~l~l~aal~~a~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 219 (299)
T PRK11453 145 FMLTLAAAFSWACGNIFNKKIM----SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSA-TMIHSLVTIDMTTILSLMY 219 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----cccCccchhHHHHHHHHHHHHHHHHHHHHhcCch-hhhhhhccCCHHHHHHHHH
Confidence 9999999999999999875543 333333345666777777665554 333344321 110000001000 01122
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017456 275 AVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYFYG 347 (371)
Q Consensus 275 ~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~ 347 (371)
+.++.+++.+.+...++..+-.. ..+.++..+ |+.+ +++++++||+++..+++|+++++.|...-.++
T Consensus 220 l~i~~t~~~~~l~~~~l~~~~a~----~~s~~~~l~-Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 220 LAFVATIVGYGIWGTLLGRYETW----RVAPLSLLV-PVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHH----HHHHHHHHH-HHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 33556666666655554333221 233443344 8866 99999999999999999999999888765543
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.70 E-value=5.4e-15 Score=143.35 Aligned_cols=222 Identities=18% Similarity=0.216 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD 184 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~ 184 (371)
+.+...+..++..+.++.+|.+|++++|++.++++.++.|+++++++++++|||++++++.++++.++|++++..+ +++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~-~~~ 149 (296)
T PRK15430 71 QKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT-FGS 149 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 4444444555667888999999999999999999999999999999999999999999999999999999887632 111
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhh
Q 017456 185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEAR 264 (371)
Q Consensus 185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~ 264 (371)
. ....++|+++||+|..+. ||..+++.. .......|...++.+... .. ...+.......
T Consensus 150 ---------~---~~~~l~aa~~~a~~~i~~----r~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~-- 208 (296)
T PRK15430 150 ---------L---PIIALGLAFSFAFYGLVR----KKIAVEAQT-GMLIETMWLLPVAAIYLF-AI-ADSSTSHMGQN-- 208 (296)
T ss_pred ---------c---cHHHHHHHHHHHHHHHHH----HhcCCCCch-hHHHHHHHHHHHHHHHHH-HH-ccCCcccccCC--
Confidence 0 135777899999988774 333222222 222233343333332211 11 11111001000
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456 265 AYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 265 ~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~ 343 (371)
.+. ....++...+.+.+.+.+...+.... ++-..+.....+ |+.+ +++++++||+++..+++|+++++.|+..
T Consensus 209 ~~~-~~~~~~~~g~~t~i~~~~~~~a~~~~----~a~~~s~~~~l~-Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v 282 (296)
T PRK15430 209 PMS-LNLLLIAAGIVTTVPLLCFTAAATRL----RLSTLGFFQYIG-PTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI 282 (296)
T ss_pred cHH-HHHHHHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 000 00011111223434444433332222 222233333344 7755 9999999999999999999999999999
Q ss_pred HHhccccchhh
Q 017456 344 YFYGEIKNKKK 354 (371)
Q Consensus 344 y~y~~~~~~~k 354 (371)
+..+.-...||
T Consensus 283 ~~~~~~~~~~~ 293 (296)
T PRK15430 283 FVMDAIYTQRR 293 (296)
T ss_pred HHHHHHHHhhh
Confidence 97776555443
No 13
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.69 E-value=3.9e-17 Score=154.12 Aligned_cols=218 Identities=14% Similarity=0.236 Sum_probs=171.3
Q ss_pred HHHHHhccCC-CChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCC-------CC---c
Q 017456 121 NYLYAYGVAR-LPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRP-------DN---E 189 (371)
Q Consensus 121 n~Ly~~gl~y-lpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~-------~~---~ 189 (371)
|..-.+++++ +|.-.+.++++-.++-||+.+++++|+|++.+|+.++++.++|+++-.+.++.|.. .+ .
T Consensus 78 nv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~ 157 (330)
T KOG1583|consen 78 NVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQS 157 (330)
T ss_pred eeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccc
Confidence 3333445555 66666999999999999999999999999999999999999998876554443211 11 1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH--HHHHccchhhh-hhh---h
Q 017456 190 SARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTV--GMVVNKDFQAI-GKE---A 263 (371)
Q Consensus 190 s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~v--g~~~~g~~~~l-~~e---~ 263 (371)
+.....+|+.+...|.+..|...++.|..|||++|+. -|..+|.++...+.++. ..+.+ +|... ..| .
T Consensus 158 ~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~-----~EalFytH~LsLP~Flf~~~div~-~~~~~~~se~~~~ 231 (330)
T KOG1583|consen 158 DFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHW-----KEALFYTHFLSLPLFLFMGDDIVS-HWRLAFKSESYLI 231 (330)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh-----HHHHHHHHHhccchHHHhcchHHH-HHHHHhcCcceec
Confidence 2233468999999999999999999999999998875 49999999999877773 22222 23211 111 0
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456 264 RAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 264 ~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~ 343 (371)
....---++.|..+..+.+++-+|.-|+.-+...++|++-+++.+++.-++.+++++.|.++|++..++|.++++.|...
T Consensus 232 p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 232 PLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLL 311 (330)
T ss_pred cccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHH
Confidence 01100023555668899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H
Q 017456 344 Y 344 (371)
Q Consensus 344 y 344 (371)
|
T Consensus 312 f 312 (330)
T KOG1583|consen 312 F 312 (330)
T ss_pred H
Confidence 8
No 14
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.65 E-value=2.8e-13 Score=131.20 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=136.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD 184 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~ 184 (371)
|+.......|+..+..+.++.++++|+|++.++++..++|+++++++. ||..+. .++.++.+|+.++...+. +
T Consensus 69 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~-~ 141 (293)
T PRK10532 69 EQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQ-D 141 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCC-C
Confidence 444445567777788888888999999999999999999999999873 565544 456667888877652221 1
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhh
Q 017456 185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEAR 264 (371)
Q Consensus 185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~ 264 (371)
. +.....|+++.++|+++||.|..+.++.. ++++... + .+..+++++++.......++ ....+..
T Consensus 142 ~-----~~~~~~G~ll~l~aa~~~a~~~v~~r~~~----~~~~~~~---~-~~~~~~~~~~l~~~~~~~~~--~~~~~~~ 206 (293)
T PRK10532 142 V-----SHVDLTGAALALGAGACWAIYILSGQRAG----AEHGPAT---V-AIGSLIAALIFVPIGALQAG--EALWHWS 206 (293)
T ss_pred c-----ccCChHHHHHHHHHHHHHHHHHHHHHHHh----ccCCchH---H-HHHHHHHHHHHHHHHHHccC--cccCCHH
Confidence 1 11235799999999999999888875543 3333211 1 23345555444433333321 1111111
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456 265 AYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 265 ~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~ 343 (371)
.+ + ...++.++++++.|.+...++.-. ++-..+.+...+ |+.+ +++++++||+++..+++|+++++.|...
T Consensus 207 ~~--~-~~l~lgv~~t~~~~~l~~~~~~~~----~a~~as~~~~l~-Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~ 278 (293)
T PRK10532 207 IL--P-LGLAVAILSTALPYSLEMIALTRL----PTRTFGTLMSME-PALAAVSGMIFLGETLTLIQWLALGAIIAASMG 278 (293)
T ss_pred HH--H-HHHHHHHHHHHHHHHHHHHHHHhc----ChhHHHHHHHhH-HHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 11 0 112444666777766655553333 222334443444 8755 9999999999999999999999999988
Q ss_pred HHhcc
Q 017456 344 YFYGE 348 (371)
Q Consensus 344 y~y~~ 348 (371)
+...+
T Consensus 279 ~~~~~ 283 (293)
T PRK10532 279 STLTI 283 (293)
T ss_pred HHhcC
Confidence 86543
No 15
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.62 E-value=1.6e-13 Score=131.92 Aligned_cols=218 Identities=11% Similarity=0.051 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCC
Q 017456 106 VFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR 185 (371)
Q Consensus 106 ~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~ 185 (371)
.....+..|+..+....++.+++++.|++..+.+.+++|+++++++++++|||++++++.|+++.+.|+.++..++.. +
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-~ 140 (281)
T TIGR03340 62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-Q 140 (281)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-c
Confidence 333555566666788888888999999999999999999999999999999999999999999999999887643221 1
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhh
Q 017456 186 PDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARA 265 (371)
Q Consensus 186 ~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~ 265 (371)
....|+.+.+.++++|++|..+.++..++.. +.........+..+....++..-....++....+.+...
T Consensus 141 -------~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (281)
T TIGR03340 141 -------HRRKAYAWALAAALGTAIYSLSDKAAALGVP---AFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQI 210 (281)
T ss_pred -------cchhHHHHHHHHHHHHHHhhhhccccccchh---cccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHH
Confidence 1235788899999999998887533221111 111111122222222212222211112221110110000
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456 266 YTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 266 f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~ 343 (371)
+ ...+...+.+++.+.+...++...-... .+.. ....|+.+ +++++++||+++..+++|+++++.|...
T Consensus 211 ~----~~~~~~~~~s~l~~~l~~~al~~~~a~~----~~~~-~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 211 L----PSATLGGLMIGGAYALVLWAMTRLPVAT----VVAL-RNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHhhCCceE----EEee-cccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 0 0112224445555555444432221111 1111 13347755 9999999999999999999999998764
No 16
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.61 E-value=1.5e-13 Score=133.24 Aligned_cols=208 Identities=12% Similarity=0.053 Sum_probs=127.0
Q ss_pred HHHHHHHHHhcc----CCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC--cc
Q 017456 117 TGLDNYLYAYGV----ARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN--ES 190 (371)
Q Consensus 117 ~~~~n~Ly~~gl----~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~--~s 190 (371)
.+..+.++..++ +.+|++.++++.+++|+|+++++++++|||++++++.++++.++|++++..++.+.+..+ .+
T Consensus 71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 150 (295)
T PRK11689 71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN 150 (295)
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence 345555444454 457888899999999999999999999999999999999999999988764432111000 01
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhcccc
Q 017456 191 ARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGE 270 (371)
Q Consensus 191 ~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~ 270 (371)
..+...|+++.++|+++||+|..+.++. .++.+. +.+.. ..+.+.+......+++.. .+.+.+.+
T Consensus 151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~----~~~~~~---~~~~~---~~~~~~l~~~~~~~~~~~-~~~~~~~~---- 215 (295)
T PRK11689 151 IASNPLSYGLAFIGAFIWAAYCNVTRKY----ARGKNG---ITLFF---ILTALALWIKYFLSPQPA-MVFSLPAI---- 215 (295)
T ss_pred cccChHHHHHHHHHHHHHHHHHHHHhhc----cCCCCc---hhHHH---HHHHHHHHHHHHHhcCcc-ccCCHHHH----
Confidence 1124579999999999999999886443 333222 11211 112222222222333221 11111111
Q ss_pred chhHH-HHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456 271 GKYYA-VVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYF 345 (371)
Q Consensus 271 ~~y~~-~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~ 345 (371)
.+.. ..+.+.+.+.+...++..+ +....+... ...|+.+ +++++++||+++..+++|+++++.|+....
T Consensus 216 -~~l~~~~~~t~~~~~l~~~al~~~----~a~~~s~~~-~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 216 -IKLLLAAAAMGFGYAAWNVGILHG----NMTLLATAS-YFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcc----CHHHHHHHH-HhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 1111 1123334444433333222 222233333 3448865 999999999999999999999999887664
No 17
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.49 E-value=1.1e-10 Score=110.02 Aligned_cols=214 Identities=21% Similarity=0.280 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHH-HHhccccchhHHHHHHHHHHHHHHHhcccCCCCCC
Q 017456 109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAF-LLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPD 187 (371)
Q Consensus 109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~-l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~ 187 (371)
..+.-++..+..+.+|..+++|+|++.++++.++.|++++++++ +++|||++++++.++++.++|+.++...+..+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~-- 149 (292)
T COG0697 72 LLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG-- 149 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch--
Confidence 34444455578888998899999999999999999999999996 777999999999999999999888875543211
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH-HHHHHHHHHHHHHHHHccchhhhhhhhhhh
Q 017456 188 NESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQM-VMCLFATLVCTVGMVVNKDFQAIGKEARAY 266 (371)
Q Consensus 188 ~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~-~~slvat~~~~vg~~~~g~~~~l~~e~~~f 266 (371)
.. +..|+++.+.+++.++++....++.. +.+. ..+.. +... ....+....... +.+ .+.+...+
T Consensus 150 ---~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-----~~~~---~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~ 214 (292)
T COG0697 150 ---IL-SLLGLLLALAAALLWALYTALVKRLS-----RLGP---VTLALLLQLL-LALLLLLLFFLS-GFG-APILSRAW 214 (292)
T ss_pred ---hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCh---HHHHHHHHHH-HHHHHHHHHHhc-ccc-ccCCHHHH
Confidence 11 67999999999999999887754443 1111 11111 1111 111111111111 111 11111111
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456 267 TLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYF 345 (371)
Q Consensus 267 ~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~ 345 (371)
...-+..++.+.+.+.+...++.-. ..+ ..+.+. ...|+.+ +++++++||+++..+++|+++++.|.....
T Consensus 215 ---~~~~~~g~~~~~i~~~~~~~~~~~~---~~~-~~~~~~-~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 215 ---LLLLYLGVFSTGLAYLLWYYALRLL---GAS-LVALLS-LLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhc---Cch-HHHHHH-HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 0001111222223333333332221 111 112222 3347766 669999999999999999999999999887
Q ss_pred hc
Q 017456 346 YG 347 (371)
Q Consensus 346 y~ 347 (371)
+.
T Consensus 287 ~~ 288 (292)
T COG0697 287 LR 288 (292)
T ss_pred cc
Confidence 66
No 18
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.42 E-value=1.7e-11 Score=117.60 Aligned_cols=220 Identities=17% Similarity=0.195 Sum_probs=157.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 017456 110 SAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNE 189 (371)
Q Consensus 110 ~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~ 189 (371)
.+..|+..+.|-.+-+||+.|+|++.||...++.++|..+|+.++--||+++.-...+.+...|..++...+.+
T Consensus 87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq------ 160 (349)
T KOG1443|consen 87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ------ 160 (349)
T ss_pred hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc------
Confidence 45678888999999999999999999999999999999999999999999999888888877777776655442
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhh-hh
Q 017456 190 SARQYLVGFLMTIGAAVLYGFVLPLMELTYKRA--RQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEAR-AY 266 (371)
Q Consensus 190 s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~--~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~-~f 266 (371)
-.+.|+.++++|++..|+.+.+.|...||- .++++..++-.+|-|+++ ..+..+..++|.......+.. .+
T Consensus 161 ---f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~---~Ll~~~l~fEG~~~~~~s~~f~~~ 234 (349)
T KOG1443|consen 161 ---FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI---GLLPLSLLFEGLHLITSSSIFRFQ 234 (349)
T ss_pred ---eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH---HHHHHHHHHcccccchhhhHHHhc
Confidence 147999999999999999999999999874 356666666677766543 344467778886443322221 22
Q ss_pred ccccchhHHHHHHHHHHHHHHH--H--hhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456 267 TLGEGKYYAVVVASALIWQCFF--L--GAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFA 342 (371)
Q Consensus 267 ~~g~~~y~~~lv~~av~~q~~~--~--g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~ 342 (371)
+.+. .+. .++....-+... + .-.-++..+++++.++.-..---.+.++|++..+|.++...+.|+.+++.|..
T Consensus 235 d~~~--~~r-v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~ 311 (349)
T KOG1443|consen 235 DTGL--ILR-VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGIL 311 (349)
T ss_pred CccH--HHH-HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHH
Confidence 2222 111 111111111111 1 11223334556555555433334466899999999999999999999999999
Q ss_pred HH
Q 017456 343 SY 344 (371)
Q Consensus 343 ~y 344 (371)
.|
T Consensus 312 ~~ 313 (349)
T KOG1443|consen 312 LH 313 (349)
T ss_pred Hh
Confidence 98
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.40 E-value=9e-11 Score=111.12 Aligned_cols=99 Identities=16% Similarity=0.221 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCC
Q 017456 106 VFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR 185 (371)
Q Consensus 106 ~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~ 185 (371)
+.......|++.+.++.+|.++++|+|+++++++.++.|+|+++++++++|||++++++.++++.++|++++..+ +++
T Consensus 69 ~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~-~~~- 146 (256)
T TIGR00688 69 LILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL-KGS- 146 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-cCC-
Confidence 344566778888999999999999999999999999999999999999999999999999999999999877532 111
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017456 186 PDNESARQYLVGFLMTIGAAVLYGFVLPLMEL 217 (371)
Q Consensus 186 ~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~ 217 (371)
. . .+.++++++|++|....++
T Consensus 147 ----~---~----~~~l~aa~~~a~~~i~~~~ 167 (256)
T TIGR00688 147 ----L---P----WEALVLAFSFTAYGLIRKA 167 (256)
T ss_pred ----c---h----HHHHHHHHHHHHHHHHHhh
Confidence 0 1 3578899999999888543
No 20
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.39 E-value=1.3e-10 Score=111.15 Aligned_cols=218 Identities=18% Similarity=0.227 Sum_probs=149.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccC
Q 017456 103 RPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTN 182 (371)
Q Consensus 103 ~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~ 182 (371)
+||.++...+.+++++.|-++|.|+.+.=-+-.+|+=+...|.++.+.+.+++|||+++.|+++++++.+|+....++.+
T Consensus 68 ~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g 147 (293)
T COG2962 68 QPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG 147 (293)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 45889999999999999999999999987777789999999999999999999999999999999999999988877654
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHHHHHHccchhh-hh
Q 017456 183 GDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEIT-YALVLEIQMVMCLFATLVCTVGMVVNKDFQA-IG 260 (371)
Q Consensus 183 s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~-~~~vle~q~~~slvat~~~~vg~~~~g~~~~-l~ 260 (371)
+- . +.+++=+..|++|..+ ||..+-+. ....+|+.. -.+++++.++...|-++ ..
T Consensus 148 ~l---------p----wval~la~sf~~Ygl~-----RK~~~v~a~~g~~lE~l~-----l~p~al~yl~~l~~~~~~~~ 204 (293)
T COG2962 148 SL---------P----WVALALALSFGLYGLL-----RKKLKVDALTGLTLETLL-----LLPVALIYLLFLADSGQFLQ 204 (293)
T ss_pred CC---------c----HHHHHHHHHHHHHHHH-----HHhcCCchHHhHHHHHHH-----HhHHHHHHHHHHhcCchhhh
Confidence 31 1 2445567789998888 55545432 344556553 23444444443333221 11
Q ss_pred hhhhhhccccchhHHHHH----HHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHH
Q 017456 261 KEARAYTLGEGKYYAVVV----ASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLA 335 (371)
Q Consensus 261 ~e~~~f~~g~~~y~~~lv----~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~ 335 (371)
.+....+..++ .|++.-.++..+...+...+- |+..=.+ |... ++|+++|||+++..|.++-+
T Consensus 205 -------~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~----G~lqYi~-Ptl~fllav~i~~E~~~~~~~~~F~ 272 (293)
T COG2962 205 -------QNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTL----GFLQYIE-PTLMFLLAVLIFGEPFDSDQLVTFA 272 (293)
T ss_pred -------cCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHH----HHHHHHH-HHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 01112222222 233333333333322211111 2222233 7644 99999999999999999999
Q ss_pred HHHHHHHHHHhccccchhhh
Q 017456 336 LSLWGFASYFYGEIKNKKKM 355 (371)
Q Consensus 336 Lvl~G~~~y~y~~~~~~~k~ 355 (371)
.+-.|.+.|......+.+|+
T Consensus 273 ~IW~aL~l~~~d~l~~~r~~ 292 (293)
T COG2962 273 FIWLALALFSIDGLYTARKK 292 (293)
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999998887666554
No 21
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.38 E-value=2.8e-10 Score=110.50 Aligned_cols=221 Identities=14% Similarity=0.098 Sum_probs=145.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHH-HhHHHHHHHHHHHhccccchhH----HHHHHHHHHHHHHHh
Q 017456 104 PPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIA-SQLAFTAAFAFLLVKQKLTSYS----LNAVFLLTLGAVVLG 178 (371)
Q Consensus 104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~s-sql~Ftalfs~l~~kek~t~~~----i~~vvLl~~Ga~ll~ 178 (371)
++.+...+..|++++..|+.|..+.+|+.++++..+.+ .+++++++++.+++|||.++++ +.|+++..+|+.++.
T Consensus 56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~ 135 (290)
T TIGR00776 56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS 135 (290)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence 47777899999999999999999999999999999988 9999999999999999999999 999999999988876
Q ss_pred cccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhh
Q 017456 179 LHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQA 258 (371)
Q Consensus 179 ~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~ 258 (371)
..++++.. +.+..++..|+++.+.|+++|+.|....+.. +.+++. ..=.|.+.-+++..+..... . +.+.
T Consensus 136 ~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-----~~~~~~-~~~~~~~g~~~~~~~~~~~~-~--~~~~ 205 (290)
T TIGR00776 136 RSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-----GVDGLS-VLLPQAIGMVIGGIIFNLGH-I--LAKP 205 (290)
T ss_pred eccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCcce-ehhHHHHHHHHHHHHHHHHH-h--cccc
Confidence 55432111 0000223569999999999999999997643 122221 11113332222222222211 1 1011
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHH----HH
Q 017456 259 IGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKG----VS 333 (371)
Q Consensus 259 l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~----ig 333 (371)
.+.+. .+ .....-++| .+.+.....+... ......+.+++..+ |+++ +.+++++||+.+..+. +|
T Consensus 206 ~~~~~-~~----~~~~~Gi~~-~ia~~~y~~~~~~---~~~~~~~~~ls~~~-pvia~~~~v~~l~E~~~~~~~~~~~iG 275 (290)
T TIGR00776 206 LKKYA-IL----LNILPGLMW-GIGNFFYLFSAQP---KVGVATSFSLSQLG-VIISTLGGILILGEKKTKREMIAISVG 275 (290)
T ss_pred hHHHH-HH----HHHHHHHHH-HHHHHHHHHHccc---ccchhhHHHHHHHH-HHHHHHHHHHHhccCCCcceeehhHHH
Confidence 11110 00 000011122 2333333333221 22333566777777 7755 9999999999999999 99
Q ss_pred HHHHHHHHHHH
Q 017456 334 LALSLWGFASY 344 (371)
Q Consensus 334 ~~Lvl~G~~~y 344 (371)
+++++.|...-
T Consensus 276 ~~lIi~~~~l~ 286 (290)
T TIGR00776 276 IILIIIAANIL 286 (290)
T ss_pred HHHHHHHHHHH
Confidence 99999887764
No 22
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.34 E-value=4.1e-11 Score=104.20 Aligned_cols=150 Identities=16% Similarity=0.204 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhc--cc-cchh
Q 017456 197 GFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYT--LG-EGKY 273 (371)
Q Consensus 197 G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~--~g-~~~y 273 (371)
|++++++|+++.|++.++.|+.+++..++......++++.|.+..+.+.+++..+..++++..+...+... .+ ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999998875333334456899999999999999987777665442322221111 11 2245
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456 274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY 346 (371)
Q Consensus 274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y 346 (371)
+..++.+.+.+.+.-.....++..+|+++.+++.....+++.++++++|||++|..+++|.++++.|...|.|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5667778888888888888999999999999999888889999999999999999999999999999999976
No 23
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.24 E-value=6e-10 Score=105.63 Aligned_cols=294 Identities=15% Similarity=0.119 Sum_probs=206.1
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHHHHhcCCcc--hhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCC
Q 017456 13 TTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKR--IWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQ 90 (371)
Q Consensus 13 ~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~~g~~--~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (371)
+..||.--.+|+.-.+.+-..--.+..+-|+..|=| -|--|++|-.=.. -+.+.+.+--++
T Consensus 37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ys----g~glie~~~~~~------------- 99 (367)
T KOG1582|consen 37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYS----GFGLIELQLIQT------------- 99 (367)
T ss_pred cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHH----hhhheEEEeecc-------------
Confidence 455688888888777777666667777767766644 7999999972111 112211111000
Q ss_pred CCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHH
Q 017456 91 PSNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLL 170 (371)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl 170 (371)
.++ -.+.| .|+.+..++.+...|-.-|+.|+.--+-.+..+.+++=+++.+.++-++|+.+.-..+..++
T Consensus 100 ----k~r---~iP~r---tY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm 169 (367)
T KOG1582|consen 100 ----KRR---VIPWR---TYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLM 169 (367)
T ss_pred ----cce---ecchh---HhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHH
Confidence 011 11223 44444444444444444599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 017456 171 TLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGM 250 (371)
Q Consensus 171 ~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~ 250 (371)
.+|.++..+.|++..|+- ..+|..+.-+|-+.=|+..=+.|+.+|+.. . ..+||.+|...++.+++++.+
T Consensus 170 ~lGli~FTLADs~~sPNF-----~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~-~----ss~EmvfySy~iG~vflf~~m 239 (367)
T KOG1582|consen 170 SLGLIWFTLADSQTSPNF-----NLIGVMMISGALLADAVIGNVQEKAMKMNP-A----SSSEMVFYSYGIGFVFLFAPM 239 (367)
T ss_pred HHHHHhhhhcccccCCCc-----ceeeHHHHHHHHHHHHHhhHHHHHHHhhCC-C----CcceEEEeeecccHHHHHHHH
Confidence 999999888887655533 469999999999999998888777776542 1 227999999999999999999
Q ss_pred HHccchhhhhhhhhhhc--cccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCch
Q 017456 251 VVNKDFQAIGKEARAYT--LGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQA 328 (371)
Q Consensus 251 ~~~g~~~~l~~e~~~f~--~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~ 328 (371)
..+||. .+. +.|- +..--|-..++-....+ +....+..++..-..+.+..+.|.+..++.+++.++|..++|.
T Consensus 240 vlTge~--f~a--~~fcaehp~~tyGy~~~~s~~gy-lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~ 314 (367)
T KOG1582|consen 240 VLTGEL--FSA--WTFCAEHPVRTYGYAFLFSLAGY-LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTE 314 (367)
T ss_pred Hhcccc--hhh--hHHHHhCcHhHHHHHHHHHHHhH-hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHH
Confidence 999973 211 1111 11101111122221122 1123345556666666778888999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcc
Q 017456 329 EKGVSLALSLWGFASYFYGE 348 (371)
Q Consensus 329 ~k~ig~~Lvl~G~~~y~y~~ 348 (371)
...-++.+++.|+....|.+
T Consensus 315 qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 315 QYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhhhhHHHHHHHHhhcccC
Confidence 99999999999999988877
No 24
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.21 E-value=2.6e-09 Score=101.81 Aligned_cols=306 Identities=13% Similarity=0.208 Sum_probs=179.1
Q ss_pred HHHHHHHHHhhhchHHHHHHHH--HhcCCc----chhHHHH-HhhhchhhHHHHHHHhh-hhcCCCCCCCCCCCCCCCCC
Q 017456 20 LILNIILLAIGNCAGPLIMRLY--FLHGGK----RIWFSSW-LETAGCPVILIPITVSY-LQRRRSGTTTDHESSTSSQP 91 (371)
Q Consensus 20 ~~~~~~~~~~g~~~~~Ll~r~y--~~~~g~----~~w~~t~-vq~agfp~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 91 (371)
+++..+++..| +.-+++.++- ...+|. ...++++ ....+|- ++.+++ .|+|+++++..++ . +.-
T Consensus 5 v~ls~imvvsG-s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEfl----Cl~vf~lir~~sn~~g~~s~-~--~~i 76 (372)
T KOG3912|consen 5 VFLSLIMVVSG-SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFL----CLAVFKLIRLRSNGQGVSSD-L--DSI 76 (372)
T ss_pred hhhhhhhhhhc-cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHH----HHHHHHHHHHhhcCCCcccc-c--ccc
Confidence 55666777777 6677777774 333443 3443332 2233333 222222 2334333221110 0 000
Q ss_pred CCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHH
Q 017456 92 SNNDDNKLILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLT 171 (371)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~ 171 (371)
..++++| +.|++++.=+++-+ .+..++|. |+++++++++..++-.-.+||.+|+.-+++++++.+||.|+....
T Consensus 77 lsq~~~p---f~p~lfl~Pal~Di--~gsslm~v-gL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~ 150 (372)
T KOG3912|consen 77 LSQDSSP---FNPVLFLPPALCDI--AGSSLMYV-GLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVS 150 (372)
T ss_pred cccccCC---CCcceecChHHHHH--hhhHHHHH-HHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHH
Confidence 1112222 33444444344444 66688886 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCC-CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH---
Q 017456 172 LGAVVLGLHTNGDRP-DNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCT--- 247 (371)
Q Consensus 172 ~Ga~ll~~~~~s~~~-~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~--- 247 (371)
+|.++++..|-..++ +....++.+.|+++.+.|-+.-|.-+.+-|+..+|. . ...++..-|-++++...+.
T Consensus 151 lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~----n-V~pl~avg~eGlfG~v~~slL~ 225 (372)
T KOG3912|consen 151 LGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS----N-VAPLQAVGWEGLFGLVILSLLA 225 (372)
T ss_pred hhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc----c-CCHHHHhhhhhhHHHHHHHHHH
Confidence 998888755432111 111223457899999999999999888876665543 1 2334555555555522111
Q ss_pred --HHHHHccc-hhhhhhh-----hhhhc--cccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-H
Q 017456 248 --VGMVVNKD-FQAIGKE-----ARAYT--LGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-I 316 (371)
Q Consensus 248 --vg~~~~g~-~~~l~~e-----~~~f~--~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-i 316 (371)
+..+..|| +..-++. ...|. .+++...+.+.++.++...+-+.-..+..+.|+..-.+.-.++ ..+. +
T Consensus 226 i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lR-t~~IWv 304 (372)
T KOG3912|consen 226 IPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLR-TYVIWV 304 (372)
T ss_pred HHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhh-hhhhhH
Confidence 23334442 1111110 11121 3445555656666655444333322222233332333333333 2333 8
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456 317 LAVIFYKEKFQAEKGVSLALSLWGFASYF 345 (371)
Q Consensus 317 lavl~fge~~t~~k~ig~~Lvl~G~~~y~ 345 (371)
++...++|.|...++.|.++.+.|...|.
T Consensus 305 ~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 305 FSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999984
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.17 E-value=6e-10 Score=103.75 Aligned_cols=242 Identities=13% Similarity=0.112 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456 109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN 188 (371)
Q Consensus 109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~ 188 (371)
.|+.+.+-+.+.-.--.-+++|.|--|..+=.+.+|+=+|+++.++.+++++|++-.++.+..+|+++..-.+.. -.+
T Consensus 87 ~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K--v~g 164 (337)
T KOG1580|consen 87 MYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK--VGG 164 (337)
T ss_pred HHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--cCC
Confidence 444444444444444446899999999999999999999999999999999999999999999999888755432 112
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhcc
Q 017456 189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTL 268 (371)
Q Consensus 189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~ 268 (371)
..++...+|-++.+.+-..=|+-..+.++.++.+ ++... .|++++.+-+++.+.+|++.+||..++-+=.++ +
T Consensus 165 ~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g~----~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R--h 237 (337)
T KOG1580|consen 165 AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-QRTGT----SMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR--H 237 (337)
T ss_pred CcccccchHHHHHHHHHHhcccchhHHHHHHHhh-ccCch----hhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh--c
Confidence 2344467899999999888888777777776544 33333 667777777888888999999974322111110 1
Q ss_pred ccchhHHHHH--HHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456 269 GEGKYYAVVV--ASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY 346 (371)
Q Consensus 269 g~~~y~~~lv--~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y 346 (371)
-...|-+.++ ..++.+...+. .+-.-+-+..+++.+-+.-.+.+.+|++|++++++.|++|..+++.+...
T Consensus 238 P~~~~~l~l~ai~s~LGQ~fIF~----tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~--- 310 (337)
T KOG1580|consen 238 PYVFWDLTLLAIASCLGQWFIFK----TVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA--- 310 (337)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHH----HHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh---
Confidence 1111112222 22222222122 22233455567888888888999999999999999999999999987665
Q ss_pred ccccchhhh---hhhcCCCCCCCC
Q 017456 347 GEIKNKKKM---KKREQLPETEMP 367 (371)
Q Consensus 347 ~~~~~~~k~---~~~~~~~~~~~~ 367 (371)
+-++.||+ ..|+|..|+|..
T Consensus 311 -D~~~GK~a~~t~akkp~~~~~~~ 333 (337)
T KOG1580|consen 311 -DVVDGKKAPMTAAKKPLAATEPK 333 (337)
T ss_pred -HhhcCCcCccccccCCCcCCCcc
Confidence 33344433 224444555544
No 26
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.14 E-value=2.5e-09 Score=103.70 Aligned_cols=225 Identities=12% Similarity=0.140 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcch
Q 017456 112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESA 191 (371)
Q Consensus 112 ~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~ 191 (371)
..-+++.++-+.=..+++|+|+.+++++....++++++....++|.|++++.+.++++..+|+..-+..|.+.+
T Consensus 82 P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~------ 155 (314)
T KOG1444|consen 82 PVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFN------ 155 (314)
T ss_pred cHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceec------
Confidence 34455555555556799999999999999999999999999999999999999999999999887776665532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccc
Q 017456 192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEG 271 (371)
Q Consensus 192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~ 271 (371)
..|...++..-++-+.+....++..+.- +...+ ++.+|-.+++.++..+-.+..|||+.+..+-..+...
T Consensus 156 ---~~gY~w~~~n~~~~a~~~v~~kk~vd~~-~l~~~----~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~-- 225 (314)
T KOG1444|consen 156 ---LRGYSWALANCLTTAAFVVYVKKSVDSA-NLNKF----GLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDS-- 225 (314)
T ss_pred ---chhHHHHHHHHHHHHHHHHHHHHhhccc-cccce----eEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccch--
Confidence 3488888888888888888875544322 22233 7888999999999999888999986332221111111
Q ss_pred hhHHHHH-HHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccc
Q 017456 272 KYYAVVV-ASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIK 350 (371)
Q Consensus 272 ~y~~~lv-~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~ 350 (371)
..+..+. +.......-+-+.-. ....|+...+++-+.-+-.+.+..++++|+++++.+.+|..+.+.|-+.|.|..++
T Consensus 226 ~~~~~~~lScv~gf~isy~s~~c-t~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~ 304 (314)
T KOG1444|consen 226 SVLVVMLLSCVMGFGISYTSFLC-TRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFR 304 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhh
Confidence 1111111 111111111111000 01223333444443333556688888889999999999999999999999888765
Q ss_pred chh
Q 017456 351 NKK 353 (371)
Q Consensus 351 ~~~ 353 (371)
++|
T Consensus 305 ~k~ 307 (314)
T KOG1444|consen 305 KKK 307 (314)
T ss_pred hcc
Confidence 543
No 27
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.14 E-value=2.1e-10 Score=112.43 Aligned_cols=221 Identities=13% Similarity=0.147 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456 109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN 188 (371)
Q Consensus 109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~ 188 (371)
--+.+|+.......+=..+++|.|||....+.++.|+|+.++++++.+|++++....+++....|+.+-..++.
T Consensus 85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~------ 158 (316)
T KOG1441|consen 85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL------ 158 (316)
T ss_pred HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc------
Confidence 34456666677777777899999999999999999999999999999999999999999988888655544322
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH--HHHHccchhhhhhhhhhh
Q 017456 189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTV--GMVVNKDFQAIGKEARAY 266 (371)
Q Consensus 189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~v--g~~~~g~~~~l~~e~~~f 266 (371)
+-+..|++.++++-+.+++..++.+...++- +++ ...++..-|++-++.+.+++ -...+|+- ....+...|
T Consensus 159 ---~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~--~~~-~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~~~~~~~~ 231 (316)
T KOG1441|consen 159 ---SFNLFGFISAMISNLAFALRNILSKKLLTSK--GES-LNSMNLLYYTAPISLIFLLIPFLDYVEGNK-FVGFLTAPW 231 (316)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHhhhcc--ccc-cCchHHHHHhhhHHHHHHhcchHhhhcccc-eeeeecccc
Confidence 1257999999999999999888877766421 111 23456666666666555552 22223321 100011111
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhh----hhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456 267 TLGEGKYYAVVVASALIWQCFFLGAI----GVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFA 342 (371)
Q Consensus 267 ~~g~~~y~~~lv~~av~~q~~~~g~~----Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~ 342 (371)
+.. ++..+... +|...++ -++-.+|.++.++....-=-++.+.++++|+|+.|+.++.|.++++.|+.
T Consensus 232 ~~~---~~~~~~~s-----v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~ 303 (316)
T KOG1441|consen 232 FVT---FLILLLNS-----VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVF 303 (316)
T ss_pred chh---hHHHHHHH-----HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHH
Confidence 111 12112222 3333322 22224555555444322212344778899999999999999999999998
Q ss_pred HHHhcccc
Q 017456 343 SYFYGEIK 350 (371)
Q Consensus 343 ~y~y~~~~ 350 (371)
.|.+.+.+
T Consensus 304 ~Y~~~k~~ 311 (316)
T KOG1441|consen 304 LYSRAKLK 311 (316)
T ss_pred HHHHHhhh
Confidence 87765543
No 28
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.09 E-value=5.1e-11 Score=112.59 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=133.0
Q ss_pred HHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhc-----ccCCCCCCCcch-
Q 017456 118 GLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGL-----HTNGDRPDNESA- 191 (371)
Q Consensus 118 ~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~-----~~~s~~~~~~s~- 191 (371)
.+-.++| |++.|+|.+-+++|..+.|.||.+|++.++|||+|++..++..+...|++++.- +++.+. .+++.
T Consensus 109 tgvmlmy-ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g-~~~s~~ 186 (346)
T KOG4510|consen 109 TGVMLMY-YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG-EDSSQV 186 (346)
T ss_pred hHHHHHH-HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc-cccccc
Confidence 4445667 699999999999999999999999999999999999999999999999988752 222111 11111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccc
Q 017456 192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEG 271 (371)
Q Consensus 192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~ 271 (371)
.....|-..++.+.+.-|--.++ .|+++|+-++.+.+ -|.++++.+..++|...-|++ .+|+..+++-
T Consensus 187 ~~~~~gt~aai~s~lf~asvyIi----lR~iGk~~h~~msv---syf~~i~lV~s~I~~~~ig~~-~lP~cgkdr~---- 254 (346)
T KOG4510|consen 187 EYDIPGTVAAISSVLFGASVYII----LRYIGKNAHAIMSV---SYFSLITLVVSLIGCASIGAV-QLPHCGKDRW---- 254 (346)
T ss_pred cccCCchHHHHHhHhhhhhHHHH----HHHhhccccEEEEe---hHHHHHHHHHHHHHHhhccce-ecCccccceE----
Confidence 12245655555544444432222 36676766664333 355788888888888888877 5766433220
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhchhhH---H--HHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456 272 KYYAVVVASALIWQCFFLGAIGVIYCGSSLL---S--AIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASYF 345 (371)
Q Consensus 272 ~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~---~--~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y~ 345 (371)
.+..+. ..|..|.+..+-++- + +-++++...+-+ +..+++||+.+|+..++|+++++.....-.
T Consensus 255 -l~~~lG---------vfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a 324 (346)
T KOG4510|consen 255 -LFVNLG---------VFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA 324 (346)
T ss_pred -EEEEeh---------hhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence 000000 122223333333332 1 233556666656 889999999999999999999886555443
No 29
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.08 E-value=1.9e-09 Score=100.24 Aligned_cols=202 Identities=16% Similarity=0.167 Sum_probs=112.6
Q ss_pred ChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC----------------CC-C-CCcchhh
Q 017456 132 PVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG----------------DR-P-DNESARQ 193 (371)
Q Consensus 132 pvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s----------------~~-~-~~~s~~~ 193 (371)
++..+.+..+.+++++++..+.+.++|++..|+.+.++++.|++.-.+.+.+ ++ + .....++
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 3344666667777777777777777777777777776666665542222110 00 0 0112234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchh
Q 017456 194 YLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKY 273 (371)
Q Consensus 194 ~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y 273 (371)
...|..+.+.+....++-..+.|+.+|+. +...|...+++. +...+....+.... +.+..+. .++.+|....
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-~~~~~~~~~~l~----~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~ 154 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKDG-DTMFWSRNLQLP----LFGLFSTFSVLLWS-DGTLISN--FGFFIGYPTA 154 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccCC-CCchHHHHHHHH----HHHHHHHHHHHhhc-ccchhhc--cCcccCCchH
Confidence 57788888888877777666655443211 111111122222 22222212333322 2211211 2333443333
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
...++.+...-+. -+.....+.+++..+++.+.++.++.++++++|||+++..+++|+.+++.|...|
T Consensus 155 ~~~~~~~~a~~~~---~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 155 VWIVGLLNVGGGL---CIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHhcCc---eeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 3223322222222 2556666888889999999997778899999999999999999999999876554
No 30
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.93 E-value=4.7e-08 Score=94.20 Aligned_cols=223 Identities=16% Similarity=0.249 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456 109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN 188 (371)
Q Consensus 109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~ 188 (371)
-|..+++.-.....+=..+++|++--|.++-.+.+.+=+|+...++.|+|++...-....+.+.|+.+..+.+.+|.+.+
T Consensus 85 ~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~ 164 (327)
T KOG1581|consen 85 KYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSK 164 (327)
T ss_pred HHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccc
Confidence 44555555555544444699999999999999999999999999999999999999999999999988887766553333
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchh-hhhhhhhhhc
Q 017456 189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQ-AIGKEARAYT 267 (371)
Q Consensus 189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~-~l~~e~~~f~ 267 (371)
..+.+..+|+.+..+.-++=|+--.-.+..+++. -.....|++++.+..++....+++..|.+. .+.--. .
T Consensus 165 ~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-----k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~---~ 236 (327)
T KOG1581|consen 165 SGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY-----KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK---E 236 (327)
T ss_pred cCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC-----CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH---c
Confidence 2334668999998887777777333344444422 223458899999999999999988777543 111000 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhhhhhc------hhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHH
Q 017456 268 LGEGKYYAVVVASALIWQCFFLGAIGVIYCG------SSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGF 341 (371)
Q Consensus 268 ~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~------ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~ 341 (371)
+-+...-+.+.++ .|.+|..+.- .++.-..|.+.++-++.+++.++||.+.+..+++|..+++.|.
T Consensus 237 hp~~~~Di~l~s~--------~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i 308 (327)
T KOG1581|consen 237 HPDVAFDILLYST--------CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGI 308 (327)
T ss_pred ChhHHHHHHHHHH--------hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHH
Confidence 1221222222222 2333443322 2455577788888889999999999999999999999999776
Q ss_pred HHHHhc
Q 017456 342 ASYFYG 347 (371)
Q Consensus 342 ~~y~y~ 347 (371)
..=.|-
T Consensus 309 ~l~~~~ 314 (327)
T KOG1581|consen 309 FLEILL 314 (327)
T ss_pred HHHHHH
Confidence 654443
No 31
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.84 E-value=1.4e-08 Score=85.00 Aligned_cols=78 Identities=19% Similarity=0.366 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHH-HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC
Q 017456 105 PVFFASAIIGILTG-LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG 183 (371)
Q Consensus 105 ~~~~~~~~~G~l~~-~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s 183 (371)
|.....+..|++.. .++.+|.++++|.| +..+.+.++.|+|+++++.+++|||++++++.++++.++|++++..++.+
T Consensus 32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 33345566676665 88999999999999 58889999999999999999999999999999999999999999877754
No 32
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.77 E-value=7e-07 Score=84.30 Aligned_cols=208 Identities=17% Similarity=0.186 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCC
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGD 184 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~ 184 (371)
++....+.+|+-++..|++|-.++..+|.+++.-+-.+.|+-.++++ .+|..-. ..+.++..|..++.-...+.
T Consensus 69 ~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~--vwvaLAvlGi~lL~p~~~~~ 142 (292)
T COG5006 69 PQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDF--VWVALAVLGIWLLLPLGQSV 142 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccchhhH--HHHHHHHHHHHhheeccCCc
Confidence 44456777899889889888889999999999999999999888765 4444433 34555667776665332211
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH-HHHHHHHHHccchhhhhhhh
Q 017456 185 RPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFAT-LVCTVGMVVNKDFQAIGKEA 263 (371)
Q Consensus 185 ~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat-~~~~vg~~~~g~~~~l~~e~ 263 (371)
+ .-+..|..++++|+++|++|+..+|+.-+.. +.+..+..- .+++. +++-+|..-.|. ..+..+.
T Consensus 143 ~------~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~~g~a~g-----m~vAaviv~Pig~~~ag~-~l~~p~l 208 (292)
T COG5006 143 W------SLDPVGVALALGAGACWALYIVLGQRAGRAE--HGTAGVAVG-----MLVAALIVLPIGAAQAGP-ALFSPSL 208 (292)
T ss_pred C------cCCHHHHHHHHHHhHHHHHHHHHcchhcccC--CCchHHHHH-----HHHHHHHHhhhhhhhcch-hhcChHH
Confidence 1 1246999999999999999999987665421 112111221 22333 223355433332 1111110
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456 264 RAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFA 342 (371)
Q Consensus 264 ~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~ 342 (371)
- ....-+.+.++++-|.+=-+....+ -.+.| ++...++ |... +.+++++||.+|..|+.|.++++.+.+
T Consensus 209 l-----~laLgvavlSSalPYsLEmiAL~rl---p~~~F-~~LlSLe-Pa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 209 L-----PLALGVAVLSSALPYSLEMIALRRL---PARTF-GTLLSLE-PALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred H-----HHHHHHHHHhcccchHHHHHHHhhC---ChhHH-HHHHHhh-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 0 0001112334444444333332222 11212 3444444 8766 999999999999999999999996554
No 33
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.71 E-value=7.2e-09 Score=98.51 Aligned_cols=235 Identities=18% Similarity=0.234 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCC
Q 017456 109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN 188 (371)
Q Consensus 109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~ 188 (371)
+.++.=.++..||+ .++|.|++-+-+=++...+||.+++|+++|||-+..-..+-.+..+| ..++.++++
T Consensus 108 lsvVfi~mI~fnnl----cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~G---F~lGvdqE~--- 177 (347)
T KOG1442|consen 108 LSVVFILMISFNNL----CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILG---FGLGVDQEG--- 177 (347)
T ss_pred hhheeeeehhccce----ehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheeh---heecccccc---
Confidence 44444344477775 57799999999999999999999999999999888776655443333 223333321
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhcc
Q 017456 189 ESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTL 268 (371)
Q Consensus 189 ~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~ 268 (371)
.++.-...|.+.-+.|++.-|+.-+.. ||.... .-.-+-...+|..+.|.+.++..++++||++.+ .+|.+
T Consensus 178 ~~~~ls~~GvifGVlaSl~vAlnaiyt----kk~l~~-v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v----~~~~~ 248 (347)
T KOG1442|consen 178 STGTLSWIGVIFGVLASLAVALNAIYT----KKVLPP-VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAV----VGFPH 248 (347)
T ss_pred ccCccchhhhHHHHHHHHHHHHHHHhh----heeccc-ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHH----cCccc
Confidence 122234689999999999998866554 333211 111233678899999999999999999998755 23322
Q ss_pred -ccchhHHHHH-HHHHHHHHHHHhhhhh-hhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456 269 -GEGKYYAVVV-ASALIWQCFFLGAIGV-IYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYF 345 (371)
Q Consensus 269 -g~~~y~~~lv-~~av~~q~~~~g~~Gl-v~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~ 345 (371)
+.+.+|..+. +....+...++. |. +..+|.++-++--+..-..-.++|+.+++|.-+...+-+-.+++.|-..|.
T Consensus 249 l~a~~Fw~~mtLsglfgF~mgyvT--g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 249 LPAIKFWILMTLSGLFGFAMGYVT--GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred chHHHHHHHHHHHHHHHHHhhhee--eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 1223333222 222222221111 22 224455554554444434455999999999999999999999999999998
Q ss_pred hccccchhhhhhhcCCCCCC
Q 017456 346 YGEIKNKKKMKKREQLPETE 365 (371)
Q Consensus 346 y~~~~~~~k~~~~~~~~~~~ 365 (371)
+.+-.+.+|+. +++++.+|
T Consensus 327 ~vk~~em~~~~-~~~s~~~~ 345 (347)
T KOG1442|consen 327 LVKEHEMRKAS-AQRSPATQ 345 (347)
T ss_pred HHHHHHHHhhc-cCCCcccc
Confidence 77644443332 33444444
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.66 E-value=2.3e-07 Score=76.57 Aligned_cols=120 Identities=16% Similarity=0.271 Sum_probs=86.0
Q ss_pred hHHHHHHHHHhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHHHH
Q 017456 33 AGPLIMRLYFLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAI 112 (371)
Q Consensus 33 ~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (371)
....+.|...++ -+..++..+-...+.+ +++...+. .+++.. ..+++.+...+.
T Consensus 5 ~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~-----------------------~~~~~~~~~~~~ 58 (126)
T PF00892_consen 5 IYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLIL-GRKPFK-----------------------NLSPRQWLWLLF 58 (126)
T ss_pred eHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhh-cccccc-----------------------CCChhhhhhhhH
Confidence 345556665555 4556666666666665 33333332 111101 122244445556
Q ss_pred HHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 113 IGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 113 ~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
.|++ .+..+.+|.++++++|++..+.+..++|+++++++++++|||++++++.|+++..+|++++.
T Consensus 59 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 59 LGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6665 58889999999999999999999999999999999999999999999999999999987653
No 35
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.55 E-value=1.2e-06 Score=80.02 Aligned_cols=213 Identities=15% Similarity=0.245 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcch
Q 017456 112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESA 191 (371)
Q Consensus 112 ~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~ 191 (371)
..-+++.+.|++|..+++.++++.+|-+.+-.-+|+-+++++.+|+|+.-.++.+.+++..|+++++..|. ..
T Consensus 58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-------~~ 130 (290)
T KOG4314|consen 58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-------EH 130 (290)
T ss_pred ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-------hh
Confidence 34566788899999999999999999999999999999999999999999999999999999888874332 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH---HHHH---HHHHHccchhhhhhhhhh
Q 017456 192 RQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFAT---LVCT---VGMVVNKDFQAIGKEARA 265 (371)
Q Consensus 192 ~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat---~~~~---vg~~~~g~~~~l~~e~~~ 265 (371)
+..++|+.++++++...++|=.+ +|+.+...++ -|..-++|..+- ++.- +-+..+|- +.+ +.
T Consensus 131 a~e~iGi~~AV~SA~~aAlYKV~----FK~~iGnAn~---Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V-E~~----qs 198 (290)
T KOG4314|consen 131 ADEIIGIACAVGSAFMAALYKVL----FKMFIGNANF---GDAAHFMSCLGFFNLCFISFPALILAFTGV-EHL----QS 198 (290)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHH----HHHHhccCcc---hhHHHHHHHHHHHHHHHHhhhHHHHHHhch-HHH----HH
Confidence 34689999999999999996554 6776644332 122222222221 1110 11222331 111 11
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhh-hhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 266 YTLGEGKYYAVVVASALIWQCFFLGA-IGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 266 f~~g~~~y~~~lv~~av~~q~~~~g~-~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
|...+ |-.+.+.+..|.++-..+ +|+ .....+.-++=+.+.+|..+..-.++=+-.++.....|..++..||...
T Consensus 199 FA~~P---WG~l~G~A~L~lAFN~~iN~Gi-aL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi 274 (290)
T KOG4314|consen 199 FAAAP---WGCLCGAAGLSLAFNFLINFGI-ALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI 274 (290)
T ss_pred HhhCC---chhhhhHHHHHHHHhhheeehh-hhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence 21111 112455555555544331 222 1111222222244666887777777777788888999999999998876
Q ss_pred Hhc
Q 017456 345 FYG 347 (371)
Q Consensus 345 ~y~ 347 (371)
+..
T Consensus 275 iiP 277 (290)
T KOG4314|consen 275 IIP 277 (290)
T ss_pred ecc
Confidence 543
No 36
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.30 E-value=7.7e-05 Score=71.84 Aligned_cols=114 Identities=15% Similarity=0.145 Sum_probs=89.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHH----HHHHHHHHHHHHH
Q 017456 103 RPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSL----NAVFLLTLGAVVL 177 (371)
Q Consensus 103 ~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i----~~vvLl~~Ga~ll 177 (371)
+++.++.+++.|++.+..|..-..|++++.+|..-=+ ...|++.|.+.++++++|--+..+. .++++..+|+.+.
T Consensus 41 ~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lt 120 (269)
T PF06800_consen 41 SGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILT 120 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 3488999999999999998887778888777665433 3789999999999999998776654 4888888898887
Q ss_pred hcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017456 178 GLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMEL 217 (371)
Q Consensus 178 ~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~ 217 (371)
..++..++. ++++++..-|....+++++.|..|-.+.+.
T Consensus 121 s~~~~~~~~-~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 121 SYQDKKSDK-SSSKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred ccccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 777654332 122445567999999999999999988544
No 37
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.25 E-value=1.1e-07 Score=89.85 Aligned_cols=212 Identities=13% Similarity=0.176 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 017456 110 SAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNE 189 (371)
Q Consensus 110 ~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~ 189 (371)
|+++|+.=.-.|++-..+++|++..+..++-+=..+-+++++|+++|-|+.+.|+.|++++..|++++.+.|-..+ +..
T Consensus 81 Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag-d~a 159 (336)
T KOG2766|consen 81 YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG-DRA 159 (336)
T ss_pred hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc-ccc
Confidence 6666654444577777899999999999999999999999999999999999999999999999988876664321 111
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccc-hhhhhhhhhhhcc
Q 017456 190 SARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKD-FQAIGKEARAYTL 268 (371)
Q Consensus 190 s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~-~~~l~~e~~~f~~ 268 (371)
++.+...||++.+++|-+||+-=..-|..-||. . ..|..-..++++++...+-.+.+.. -..+.. +++.
T Consensus 160 ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~----d---~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w---~~~i 229 (336)
T KOG2766|consen 160 GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA----D---RVELMGFLGLFGAIISAIQFIFERHHVSTLHW---DSAI 229 (336)
T ss_pred CCCCCccCcEEEEecceeeeeccccHHHHHhcC----c---HHHHHHHHHHHHHHHHHHHHhhhccceeeEee---hHHH
Confidence 234568999999999999999544444444433 2 2355666688888777776555542 112211 1111
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhhhhhchh--hHHHHHHHHHHHHHH-HHHH--HHhCCCCchhHHHHHHHHHHHHHH
Q 017456 269 GEGKYYAVVVASALIWQCFFLGAIGVIYCGSS--LLSAIIIAVLLPVTE-ILAV--IFYKEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 269 g~~~y~~~lv~~av~~q~~~~g~~Glv~~~ss--l~~~vv~t~~lPvt~-ilav--l~fge~~t~~k~ig~~Lvl~G~~~ 343 (371)
+ .....++...+++--+. +...++| .+. +. -+++ .-++ -.||-+++|.-.++.+.+..|+..
T Consensus 230 ~------~yl~f~L~MFllYsl~p-il~k~~~aT~~n-----ls-lLTsDmwsl~i~~FgYhv~wLY~laF~~i~~Glii 296 (336)
T KOG2766|consen 230 F------LYLRFALTMFLLYSLAP-ILIKTNSATMFN-----LS-LLTSDMWSLLIRTFGYHVDWLYFLAFATIATGLII 296 (336)
T ss_pred H------HHHHHHHHHHHHHHhhH-HheecCCceEEE-----hh-HhHHHHHHHHHHHHhcchhhhhHHHHHHHHHhhEE
Confidence 1 12223333333332222 2222222 111 11 1222 2222 557888999999999999999999
Q ss_pred HH
Q 017456 344 YF 345 (371)
Q Consensus 344 y~ 345 (371)
|.
T Consensus 297 Ys 298 (336)
T KOG2766|consen 297 YS 298 (336)
T ss_pred ee
Confidence 83
No 38
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.16 E-value=2.2e-05 Score=73.20 Aligned_cols=209 Identities=16% Similarity=0.178 Sum_probs=130.4
Q ss_pred HHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhHHHHHH
Q 017456 121 NYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLM 200 (371)
Q Consensus 121 n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l 200 (371)
-+--+.+++|+|+..+++...+..+..+..-.+++|.|.|.....+-+++.++.+.-.++|.+..... .+..-.|.+.
T Consensus 82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~--~~~lN~GY~W 159 (309)
T COG5070 82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK--AQILNPGYLW 159 (309)
T ss_pred HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH--hcccCCceEE
Confidence 33445789999999999999999999999999999999999999999999998877777765321100 0011235555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhHHHHHHH
Q 017456 201 TIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVAS 280 (371)
Q Consensus 201 ~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~~~lv~~ 280 (371)
.....+..+.|...+ ||.+|...+ -=.|-.+|..+.+.+.++.--+...||. -..-+.++..-. +.|-
T Consensus 160 m~~NclssaafVL~m----rkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~edws-~~n~annl~~d~------l~am 227 (309)
T COG5070 160 MFTNCLSSAAFVLIM----RKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFEDWS-PGNLANNLSVDS------LMAM 227 (309)
T ss_pred EehhhHhHHHHHHHH----HHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhccCC-cchhhcCCChHH------HHHH
Confidence 555566666666665 443333222 1137889999999888885444444664 111122332111 1111
Q ss_pred HHHHHHHHHhhhhhhhh-------chhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017456 281 ALIWQCFFLGAIGVIYC-------GSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYG 347 (371)
Q Consensus 281 av~~q~~~~g~~Glv~~-------~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~ 347 (371)
++ -. +.-+|.-++ +||-..+.+..+-.-..++.+.++|+|+.+..++.+..+-+..-+.|.+.
T Consensus 228 ~I-Sg---l~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 228 FI-SG---LCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred HH-HH---HHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 222333332 22333344433333345688899999999999999988877666666554
No 39
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.15 E-value=1.8e-05 Score=66.44 Aligned_cols=64 Identities=19% Similarity=0.279 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 115 ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 115 ~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
+.++...+++.++++.+|+|.+-.+-++.++++++.+++++|||+|++|+.|+++..+|+++++
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4467789999999999999999999999999999999999999999999999999999998876
No 40
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.06 E-value=0.00014 Score=72.93 Aligned_cols=71 Identities=13% Similarity=0.129 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCC
Q 017456 113 IGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNG 183 (371)
Q Consensus 113 ~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s 183 (371)
.|+..++...+|.+++++++++..++....+|+|++++++++++|++++.++.|.++...|+.+...+...
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~ 332 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN 332 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44445667889999999999999999999999999999999999999999999999999998887765443
No 41
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.01 E-value=6.7e-05 Score=73.56 Aligned_cols=79 Identities=24% Similarity=0.357 Sum_probs=65.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456 102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT 181 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~ 181 (371)
+.++.|.+... +++.++.+-..++.+.|.+.-+-+.+.+++++++++.+++|||++++.+.|.++..+|++++....
T Consensus 48 l~~~~W~~G~~---~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 48 LRRPLWWIGLL---LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HhhHHHHHHHH---HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 44566666553 345556666679999999999999999999999999999999999999999999999998876554
Q ss_pred CC
Q 017456 182 NG 183 (371)
Q Consensus 182 ~s 183 (371)
..
T Consensus 125 ~~ 126 (300)
T PF05653_consen 125 PK 126 (300)
T ss_pred CC
Confidence 43
No 42
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.99 E-value=0.00016 Score=67.93 Aligned_cols=70 Identities=17% Similarity=0.256 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 017456 105 PVFFASAIIGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGA 174 (371)
Q Consensus 105 ~~~~~~~~~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga 174 (371)
+.+...+..|++ .+....+|.++++++|++..+++..++|++++++++++++||+++.++.|.++...|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 189 LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 444444445543 3567888999999999999999999999999999999999999999999999988875
No 43
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.88 E-value=0.00028 Score=61.06 Aligned_cols=131 Identities=11% Similarity=0.067 Sum_probs=91.5
Q ss_pred hHHHHHHHHHhc------CCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhH
Q 017456 33 AGPLIMRLYFLH------GGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPV 106 (371)
Q Consensus 33 ~~~Ll~r~y~~~------~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (371)
.-..+.+..+.+ .-+..=+.......++++++++.++.-..+... .. ....+.+. ..+++.
T Consensus 14 l~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~----~~--------~~~~~~~~-~~~~~~ 80 (153)
T PF03151_consen 14 LRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSS----FF--------SEIFGEEL-SSDPNF 80 (153)
T ss_pred HHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh----HH--------HHhhhhhh-cchHHH
Confidence 344455555554 334455666777778888777766642111110 00 00000000 013466
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 017456 107 FFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV 176 (371)
Q Consensus 107 ~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~l 176 (371)
+..-+..|++..+.|+.-.+-++++++.+++++...+-+++.++++++++|++|..++.|++++++|..+
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 6677778888888899988899999999999999999999999999999999999999999999999653
No 44
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.83 E-value=1.2e-05 Score=68.87 Aligned_cols=77 Identities=16% Similarity=0.327 Sum_probs=70.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
.++|.+...++.|+..++.-++|..+++.=++|--.=+-.++++++++++++++|||.|..+++|+++.++|++++.
T Consensus 62 ~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 62 IGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred cCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 45677888899999999999999999999888888888999999999999999999999999999999999998765
No 45
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.83 E-value=0.00039 Score=67.48 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhc
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGL 179 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~ 179 (371)
..+...+..|+..+.-..+|.++++++|++..+++...+|++++++++++++|++++.++.|.++.+.|+.+...
T Consensus 213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 344444455666677799999999999999999999999999999999999999999999999999999766653
No 46
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.82 E-value=0.00082 Score=65.14 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=60.6
Q ss_pred HHHHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456 111 AIIGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH 180 (371)
Q Consensus 111 ~~~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~ 180 (371)
+.+|+. ......+|.++++++|++..+++..++|++++++++++++|++++.++.|.++...|++.....
T Consensus 212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 345544 3455779999999999999999999999999999999999999999999999988887776544
No 47
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.78 E-value=0.00036 Score=67.82 Aligned_cols=75 Identities=19% Similarity=0.388 Sum_probs=67.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccC-CCChhHHHHHHHHhHHHHHHHHHHHhccccchhHH----HHHHHHHHHHHHHhc
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVA-RLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSL----NAVFLLTLGAVVLGL 179 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~-ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i----~~vvLl~~Ga~ll~~ 179 (371)
+.....+..|++.+..+.+|..|.+ ++++++++++.+..|+.+++++++++||+.+++++ .|.++...|+.+++.
T Consensus 209 ~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 209 YAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 4455666699999999999999999 99999999999999999999999999999999999 999998888877764
No 48
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.72 E-value=0.019 Score=57.49 Aligned_cols=111 Identities=12% Similarity=0.186 Sum_probs=87.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccc-------cchhHHHHHHHHHHH
Q 017456 102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQK-------LTSYSLNAVFLLTLG 173 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek-------~t~~~i~~vvLl~~G 173 (371)
.+++.+..+++.|++.+..|..+..+.+|+-+|.. .+-.-+|++++.++..++++|= -...-+.|+++..+|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 34688889999999999999999999999998876 5666789999999999998752 224467888999999
Q ss_pred HHHHhc----ccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHH
Q 017456 174 AVVLGL----HTNGDRPDNESARQYLVGFLMTIGAAVLYGFVL 212 (371)
Q Consensus 174 a~ll~~----~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl 212 (371)
+++.+. .+..++.++.++++..-|++.++.+++.|++|-
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 988876 433221111234556789999999999999988
No 49
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.67 E-value=0.00014 Score=69.94 Aligned_cols=72 Identities=21% Similarity=0.390 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 017456 106 VFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVL 177 (371)
Q Consensus 106 ~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll 177 (371)
.+......++..+..+.+|.++++++|++..+.+.+++|+++.++++++++|++++.++.|.++..+|+.++
T Consensus 210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~ 281 (281)
T TIGR03340 210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence 333444555666778889999999999999999999999999999999999999999999999999997653
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.58 E-value=0.0018 Score=62.67 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHH-HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhc
Q 017456 105 PVFFASAIIGIL-TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGL 179 (371)
Q Consensus 105 ~~~~~~~~~G~l-~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~ 179 (371)
+.+...+..|+. .+....+|.++++++|++..+++..++|++++++++++++|++|+.++.|.++...|+.++..
T Consensus 210 ~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 210 SGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 334444444543 456688999999999999999999999999999999999999999999999999999877754
No 51
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.56 E-value=0.00057 Score=56.88 Aligned_cols=63 Identities=24% Similarity=0.353 Sum_probs=57.3
Q ss_pred HHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456 118 GLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH 180 (371)
Q Consensus 118 ~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~ 180 (371)
.....+.+.+++++|++++ ++-.-...+-+++.++++++||+++.++.++.+...|++.+-+.
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 6677888889999999987 99999999999999999999999999999999999998877543
No 52
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.56 E-value=0.00063 Score=58.01 Aligned_cols=70 Identities=17% Similarity=0.338 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccC
Q 017456 113 IGILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTN 182 (371)
Q Consensus 113 ~G~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~ 182 (371)
.-+.++...++++.+++++|++.+ ++......+.+++.++++++|++|+.++.++.+..+|++++-..+.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 344557888889999999999987 7777899999999999999999999999999999999988865443
No 53
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.51 E-value=0.0018 Score=62.77 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 108 FASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 108 ~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
......|+..+.-..+|.++++++|++..+++...+|+++.++++++++|++++.++.|.++..+|+.++.
T Consensus 214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 44555566666778999999999999999999999999999999999999999999999999888877665
No 54
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.51 E-value=0.00083 Score=56.33 Aligned_cols=63 Identities=21% Similarity=0.165 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 017456 115 ILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVL 177 (371)
Q Consensus 115 ~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll 177 (371)
+.++...++.+.+++++|++++ ++-.-...+.+++.+++++||++|+.|+.++.+...|++++
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3447777888889999999987 88888999999999999999999999999999999998776
No 55
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.51 E-value=0.00092 Score=55.70 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=56.3
Q ss_pred HHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 117 TGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 117 ~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
++...++.+.+++++|++++ ++-.-...+.+++.+++++||++|+.++.++.+..+|++.+-
T Consensus 39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 37777788889999999986 888889999999999999999999999999999999988774
No 56
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.51 E-value=0.0015 Score=56.09 Aligned_cols=129 Identities=14% Similarity=0.238 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhH--H
Q 017456 198 FLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY--A 275 (371)
Q Consensus 198 ~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~--~ 275 (371)
.+.++.+|.++|+--.......|.+ + ..+. .+.-.++...++..-.+..|+|+ .+.|. ..+...+ +
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v-d-p~~A-----t~IRtiVi~~~l~~v~~~~g~~~-~~~~~----~~k~~lflil 72 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV-D-PDFA-----TTIRTIVILIFLLIVLLVTGNWQ-AGGEI----GPKSWLFLIL 72 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-C-ccHH-----HHHHHHHHHHHHHHHHHhcCcee-ccccc----CcceehhhhH
Confidence 3567778888887444432222211 1 1111 11235556666666677888875 33221 1111112 2
Q ss_pred HHHHHHHHHHHHHHh-hhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456 276 VVVASALIWQCFFLG-AIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 276 ~lv~~av~~q~~~~g-~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~ 343 (371)
--+.+.++|++.+.. ..|-...+..+-+ ....++.++++++++|++|..+++|++++..|...
T Consensus 73 SGla~glswl~Yf~ALk~G~as~VvPldk-----~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail 136 (140)
T COG2510 73 SGLAGGLSWLLYFRALKKGKASRVVPLDK-----TSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL 136 (140)
T ss_pred HHHHHHHHHHHHHHHHhcCCcceEEEccc-----ccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence 245777999998866 4555444444322 33234669999999999999999999999998754
No 57
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.49 E-value=0.0012 Score=55.36 Aligned_cols=64 Identities=16% Similarity=0.269 Sum_probs=56.7
Q ss_pred HHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456 117 TGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH 180 (371)
Q Consensus 117 ~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~ 180 (371)
++...++++.+++.+|++++ ++-.....+.+++.++++++|++|+.++.++.+..+|++++-..
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 36677778889999999987 66677899999999999999999999999999999999888644
No 58
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.36 E-value=0.011 Score=55.94 Aligned_cols=137 Identities=15% Similarity=0.214 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccch--h
Q 017456 196 VGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGK--Y 273 (371)
Q Consensus 196 ~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~--y 273 (371)
.|.++.+.|++.||...+..+. . .. ....++.++-++++++.+++-....++.+...+..+...+.+.. .
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~----~-~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL----L-KP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSL 73 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH----h-cc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHH
Confidence 3888999999999997666543 2 11 23468888888888877665544444332211100100011100 0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017456 274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYF 345 (371)
Q Consensus 274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~ 345 (371)
...-+.....|.....++.- ++...++++ ...-|+ +.++++++++|+++..+++|+++.+.|+..-.
T Consensus 74 ~~~g~~~~~~~~~~~~a~~~----~~~~~a~~l-~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 74 LLCGLLIGFNWWLFIWAVNN----GSSLEVSLG-YLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHc----chHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 11111122333333333221 111123333 344587 66999999999999999999999999988654
No 59
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.33 E-value=0.0065 Score=58.96 Aligned_cols=79 Identities=13% Similarity=0.078 Sum_probs=64.9
Q ss_pred ChhHHHHHHHHH-HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456 103 RPPVFFASAIIG-ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT 181 (371)
Q Consensus 103 ~~~~~~~~~~~G-~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~ 181 (371)
++..+...+.+| +-.+....+|.+++++++++..+.+...+|++++++++++++|++++.++.|.++..+|+.+...+.
T Consensus 210 ~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 210 DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 444444445555 3345668889999999999999999999999999999999999999999999999998887665443
No 60
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.31 E-value=0.0019 Score=55.76 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHH--HhccccchhHHHHHHHHHHHHHHHhcc
Q 017456 115 ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFL--LVKQKLTSYSLNAVFLLTLGAVVLGLH 180 (371)
Q Consensus 115 ~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l--~~kek~t~~~i~~vvLl~~Ga~ll~~~ 180 (371)
+.+++..++|.++++..|++.+.-+.+...+++++.++. +++|++|+.++.|+++..+|+.++..+
T Consensus 56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 345667889999999999999988888888888888885 899999999999999999998887643
No 61
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.29 E-value=0.0024 Score=52.32 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=31.5
Q ss_pred HHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456 311 LPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFY 346 (371)
Q Consensus 311 lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y 346 (371)
.|+ +.+++++++||+++..+++|+++++.|.....|
T Consensus 90 ~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~~ 126 (126)
T PF00892_consen 90 SPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIST 126 (126)
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 376 559999999999999999999999999887654
No 62
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.17 E-value=0.0024 Score=61.86 Aligned_cols=60 Identities=10% Similarity=0.055 Sum_probs=54.8
Q ss_pred HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 119 LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 119 ~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
.-|.++.+++++++++++++....+|++++++++++++|++|..++.|.++...|+.+..
T Consensus 233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 345777779999999999999999999999999999999999999999999999987665
No 63
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.92 E-value=0.0022 Score=62.87 Aligned_cols=68 Identities=18% Similarity=0.200 Sum_probs=58.0
Q ss_pred HHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCC
Q 017456 118 GLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDR 185 (371)
Q Consensus 118 ~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~ 185 (371)
++.+..-.-++.+-|.+.-+-+.+++.+++++++..++|||++..-.+|.+++.+|.+++..+...++
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 33433333488899999999999999999999999999999999999999999999999887765443
No 64
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=96.85 E-value=0.034 Score=46.22 Aligned_cols=41 Identities=22% Similarity=0.510 Sum_probs=36.2
Q ss_pred HHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccc
Q 017456 311 LPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKN 351 (371)
Q Consensus 311 lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~ 351 (371)
-|+ +.+++.++|+|+++..+++|.++++.|++.-.+++...
T Consensus 70 ~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 70 SPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence 476 55999999999999999999999999999988877544
No 65
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.70 E-value=0.0074 Score=60.25 Aligned_cols=67 Identities=13% Similarity=0.170 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 112 IIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 112 ~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
..|+...+.|..-.++++++++.++++....+++++.++++++++|++|+.++.|.++...|+.+..
T Consensus 281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 3445555555555569999999999999999999999999999999999999999999999976643
No 66
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.53 E-value=0.017 Score=54.17 Aligned_cols=78 Identities=22% Similarity=0.348 Sum_probs=66.4
Q ss_pred ChhHHHHHHHHHHHHH-HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcc
Q 017456 103 RPPVFFASAIIGILTG-LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLH 180 (371)
Q Consensus 103 ~~~~~~~~~~~G~l~~-~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~ 180 (371)
+.+.+......|+... ....+|.++++..|++..+.+..+.|++.+++++++++|+++..++.|.++...|..+....
T Consensus 210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 3455667777776666 47888888999999999999999999999999999999999999999998888887766533
No 67
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.53 E-value=0.065 Score=52.07 Aligned_cols=132 Identities=16% Similarity=0.275 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhH
Q 017456 195 LVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYY 274 (371)
Q Consensus 195 ~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~ 274 (371)
.-|+++++.|...||..=.+ +| ..++-+ ..|+..+--+-+.++.++-+...+.|+++.. ..++.+ ...
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y----~k-ll~~~~---~~eIlahRviwS~~~~l~ll~~~r~~~~~~~---~~~~p~-~~~ 73 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLY----FK-LLEPLP---ATEILAHRVIWSFPFMLALLFLLRQWRELKQ---LLKQPK-TLL 73 (293)
T ss_pred cchhHHHHHHHHHHHHHHHH----HH-HHccCC---HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---HHhCcH-HHH
Confidence 46999999999999994444 23 333323 3477666666666666666666676665432 122222 112
Q ss_pred HHHHHH---HHHHHHHHHhh-hhhhhhchhhHHHHHHHHHHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 275 AVVVAS---ALIWQCFFLGA-IGVIYCGSSLLSAIIIAVLLPVTE-ILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 275 ~~lv~~---av~~q~~~~g~-~Glv~~~ssl~~~vv~t~~lPvt~-ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
...+.+ ..+|..+.-.+ .|++-.+| +=+ +..|++. +++.++++|+++..|+++.+++..|+..-
T Consensus 74 ~~~l~a~li~~nW~lfiWAvn~g~~leaS-LGY-----~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 74 MLALTALLIGLNWWLFIWAVNNGHVLEAS-LGY-----FINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred HHHHHHHHHHHHHHHhheecCCCchhHHH-hHH-----HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 222222 25666666442 33432222 112 4459855 99999999999999999999999998765
No 68
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.38 E-value=0.011 Score=47.88 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHhccccchhHHHHHHH
Q 017456 116 LTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFL 169 (371)
Q Consensus 116 l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~kek~t~~~i~~vvL 169 (371)
.++...++++.+++++|.+++ .+......+.+.+.+.++++|++|+.|+.++.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 457778899999999999988 777789999999999999999999999999875
No 69
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.06 E-value=0.15 Score=51.07 Aligned_cols=76 Identities=17% Similarity=0.232 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHH---HH-HHhHHHHHHHHHHHhccccc------hhHHHHHHHHHHH
Q 017456 104 PPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSL---II-ASQLAFTAAFAFLLVKQKLT------SYSLNAVFLLTLG 173 (371)
Q Consensus 104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sl---i~-ssql~Ftalfs~l~~kek~t------~~~i~~vvLl~~G 173 (371)
.|..+.+++-|++.+.+|+.|..|-+.++++.+.+ ++ |+..++..+-+. ++||+=+ +..+.++++..+|
T Consensus 257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g 335 (345)
T PRK13499 257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA 335 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence 47888999999999999999999998887765555 66 888899999888 5999877 6667888888888
Q ss_pred HHHHhcc
Q 017456 174 AVVLGLH 180 (371)
Q Consensus 174 a~ll~~~ 180 (371)
+++++.+
T Consensus 336 ~~lig~~ 342 (345)
T PRK13499 336 ANIVGLG 342 (345)
T ss_pred HHHHhhc
Confidence 8887755
No 70
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.77 E-value=0.061 Score=49.79 Aligned_cols=64 Identities=16% Similarity=0.119 Sum_probs=51.9
Q ss_pred HHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456 117 TGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT 181 (371)
Q Consensus 117 ~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~ 181 (371)
+..+|-+...++.+.++...... +.|.+.++++...+++.+++..|+.++.++..|+.....++
T Consensus 9 ~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~ 72 (222)
T TIGR00803 9 IFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQ 72 (222)
T ss_pred HHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCC
Confidence 34444444458888888888888 99999999999999999999999999988888876655443
No 71
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.69 E-value=0.05 Score=52.02 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=64.0
Q ss_pred CChhHHHHHHHHHHHHHHH-HHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Q 017456 102 MRPPVFFASAIIGILTGLD-NYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAV 175 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~-n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ 175 (371)
+++.++.++...|++...- ..+=..+++.+|..+++++.+..|++.++-++++++|..|..|+.+++....+++
T Consensus 204 ~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 204 FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 6678888888888776655 5566678999999999999999999999999999999999999999988666654
No 72
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=95.48 E-value=0.27 Score=48.98 Aligned_cols=170 Identities=19% Similarity=0.269 Sum_probs=106.3
Q ss_pred HHHHHHHHhhhchHHHHHHHH--HhcCCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCc
Q 017456 21 ILNIILLAIGNCAGPLIMRLY--FLHGGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNK 98 (371)
Q Consensus 21 ~~~~~~~~~g~~~~~Ll~r~y--~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (371)
++-+++-.+|..++ +-+| |.+--+=.|=+.|+--.=|.-++.|....+..-+.- . +...
T Consensus 6 i~Gii~h~iGg~~~---~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~-----~--------~i~~--- 66 (344)
T PF06379_consen 6 ILGIIFHAIGGFAS---GSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDF-----F--------SIYS--- 66 (344)
T ss_pred HHHHHHHHHHHHHh---hhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcH-----H--------HHHH---
Confidence 34444555552222 3344 455555578888887777888888877765433211 0 0000
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHH-HHHHHHhHHHHHHHHHHHh-------ccccchhHHHHHHHH
Q 017456 99 LILMRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTS-SLIIASQLAFTAAFAFLLV-------KQKLTSYSLNAVFLL 170 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~-sli~ssql~Ftalfs~l~~-------kek~t~~~i~~vvLl 170 (371)
..+...+...++.|++.+..++.|-.+.+|+-+|.- ++..-+..++-.+.--++. .++-....+.|+++.
T Consensus 67 --~~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~ 144 (344)
T PF06379_consen 67 --ATPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVC 144 (344)
T ss_pred --hCChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHH
Confidence 122256778899999999999999999999877543 4444444444444433332 234456789999999
Q ss_pred HHHHHHHhccc---CCCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 017456 171 TLGAVVLGLHT---NGDRPDNESARQYLVGFLMTIGAAVLYGFV 211 (371)
Q Consensus 171 ~~Ga~ll~~~~---~s~~~~~~s~~~~~~G~~l~l~Aa~~~aly 211 (371)
.+|+++.+... +.+..++.++.+.--|.++++.+++++|.+
T Consensus 145 LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~f 188 (344)
T PF06379_consen 145 LIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACF 188 (344)
T ss_pred HHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 99998886322 112222334455678999999999999883
No 73
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=95.16 E-value=0.46 Score=46.21 Aligned_cols=44 Identities=18% Similarity=0.342 Sum_probs=38.1
Q ss_pred HH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccchhhh
Q 017456 312 PV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKM 355 (371)
Q Consensus 312 Pv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~~k~ 355 (371)
|+ +.++++++++++.+..|+++.+++..|++.+.+.+..++++.
T Consensus 101 ~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~ 145 (303)
T PF08449_consen 101 PIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS 145 (303)
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence 55 559999999999999999999999999999988876666544
No 74
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=94.60 E-value=0.83 Score=38.97 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
.....+.+.++++|||++|..|++|+.+++.|+..-
T Consensus 66 iG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l 101 (120)
T PRK10452 66 IGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI 101 (120)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence 343456789999999999999999999999999775
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=94.01 E-value=0.91 Score=37.92 Aligned_cols=68 Identities=21% Similarity=0.218 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 274 YAVVVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 274 ~~~lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
.+.++.-.+++.+....+..+.- ++-+.+-+-.....+.+.++++|+|+++..|++++.+++.|+..-
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipv---gvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPL---GVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCch---HHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 33455555666655555444211 111223333444557799999999999999999999999998764
No 76
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=93.50 E-value=0.9 Score=44.04 Aligned_cols=60 Identities=15% Similarity=0.261 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHH
Q 017456 108 FASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAV 167 (371)
Q Consensus 108 ~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~v 167 (371)
.--+..|++++..|+.|..+.+..-++++=.+.|+.++...+.+.+++|||=+++++.-+
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~ 255 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT 255 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence 355778999999999999999999999999999999999999999999999998876543
No 77
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=93.42 E-value=3.6 Score=35.73 Aligned_cols=123 Identities=11% Similarity=0.121 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhHHH-
Q 017456 198 FLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAV- 276 (371)
Q Consensus 198 ~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~~~- 276 (371)
.++++.+++.-++-..+.-+..|+..+ ..+-.++...++++.+.+-.+..++. .. +....-++.+++-
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs------~~~as~i~~~~G~i~~~i~~~~~~~~-~~----~~~~~~p~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGS------PLVASFISFGVGFILLLIILLITGRP-SL----ASLSSVPWWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc------cHHHHHHHHHHHHHHHHHHHHHhccc-cc----chhccCChHHhccH
Confidence 456777777777766666555555421 23444556677777777666666542 12 1222222222221
Q ss_pred HHHHH-HHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHH--HHHHHHhC--------CCCchhHHHHHHHHHHHHH
Q 017456 277 VVASA-LIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTE--ILAVIFYK--------EKFQAEKGVSLALSLWGFA 342 (371)
Q Consensus 277 lv~~a-v~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~--ilavl~fg--------e~~t~~k~ig~~Lvl~G~~ 342 (371)
+++.. +.-....+... +...+..+.++. +.+.++.| ++++..|++|.++.+.|..
T Consensus 72 ~lG~~~V~~~~~~vp~l-----------G~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRL-----------GAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHHHHHHhhhh-----------hHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 11111 11111111111 222233334444 44444433 8899999999999999875
No 78
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=93.28 E-value=2.1 Score=42.79 Aligned_cols=69 Identities=13% Similarity=0.216 Sum_probs=52.4
Q ss_pred HHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccch
Q 017456 283 IWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNK 352 (371)
Q Consensus 283 ~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~ 352 (371)
--++.+..+.++.++..+ ....+....+|.+.+++++++++++++.|++|.++++.|++.-.+.++...
T Consensus 89 Dv~aN~~~v~a~~yTsvt-S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~ 157 (334)
T PF06027_consen 89 DVEANYLVVLAYQYTSVT-SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG 157 (334)
T ss_pred HHHHHHHHHHHhhcccHh-HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc
Confidence 335555666666653332 244555566799999999999999999999999999999999888776544
No 79
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=93.01 E-value=0.97 Score=44.42 Aligned_cols=36 Identities=28% Similarity=0.291 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456 311 LPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY 346 (371)
Q Consensus 311 lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y 346 (371)
+..+.+++-.++||+++...++|+++++.|......
T Consensus 87 lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 87 LVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred hhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 355679999999999999999999999999887643
No 80
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=92.50 E-value=2.3 Score=35.62 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
.....+.+.++++|||++|..|++|+.+++.|+..-
T Consensus 66 lG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l 101 (110)
T PRK09541 66 VGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVI 101 (110)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 343456799999999999999999999999999885
No 81
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=92.41 E-value=0.19 Score=42.44 Aligned_cols=60 Identities=17% Similarity=0.190 Sum_probs=51.7
Q ss_pred HHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 017456 117 TGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV 176 (371)
Q Consensus 117 ~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~l 176 (371)
......+|.+.++..|.|...-+ +++.-+||++.++++-+|..+++.+.|+++...|+.+
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 33447888889999999988777 5999999999999999999999999999999988754
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=92.29 E-value=2.7 Score=35.26 Aligned_cols=64 Identities=16% Similarity=0.150 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017456 277 VVASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 277 lv~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~ 343 (371)
++.-++++......+..+. -++-+.+-+-.....+.+.++++|||++|..|++|+.+++.|+..
T Consensus 42 ~~~~~~sf~~Ls~al~~lp---vgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~ 105 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGID---LSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM 105 (109)
T ss_pred HHHHHHHHHHHHHHHhhCc---hHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 4444455555444433221 111223333344455678999999999999999999999999875
No 83
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=92.25 E-value=1.2 Score=37.30 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=29.5
Q ss_pred HH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 312 PV-TEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 312 Pv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
|+ +.++++++|||++|..|++|.++++.|+..-
T Consensus 74 ~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 74 FVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 55 5699999999999999999999999998753
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=91.51 E-value=3 Score=34.69 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
.....+.+.++++|||++|..|++|+.+++.|+..-
T Consensus 65 iG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 65 IGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 443456799999999999999999999999998764
No 85
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=90.40 E-value=2.4 Score=36.47 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=27.0
Q ss_pred HHHHHHH--HhCCCCchhHHHHHHHHHHHHHHHH
Q 017456 314 TEILAVI--FYKEKFQAEKGVSLALSLWGFASYF 345 (371)
Q Consensus 314 t~ilavl--~fge~~t~~k~ig~~Lvl~G~~~y~ 345 (371)
+.++++. +|||++|..|++|+++++.|+....
T Consensus 88 v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 88 VYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4466664 8999999999999999999988854
No 86
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=86.49 E-value=1.2 Score=42.47 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccch
Q 017456 305 IIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNK 352 (371)
Q Consensus 305 vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~ 352 (371)
+..-..++.++++++++++.+++..|++++.+...|....-++...++
T Consensus 48 vl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~ 95 (244)
T PF04142_consen 48 VLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS 95 (244)
T ss_pred HHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence 333445577889999999999999999999999999999877766654
No 87
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=85.46 E-value=2.2 Score=41.01 Aligned_cols=51 Identities=24% Similarity=0.180 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccc
Q 017456 197 GFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKD 255 (371)
Q Consensus 197 G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~ 255 (371)
|.+.++.|+++||-...= .||.-..+ -+-.|.++|....+...+-.+..+.
T Consensus 1 G~~a~~va~~~fGs~~vP----vK~~~~gD----g~~fQw~~~~~i~~~g~~v~~~~~~ 51 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVP----VKKFDTGD----GFFFQWVMCSGIFLVGLVVNLILGF 51 (254)
T ss_pred CchhHHHHHHHhccccee----eEeccCCC----cHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 677888899999872222 25443223 3567877776555555555555554
No 88
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=84.01 E-value=0.062 Score=51.20 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=85.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHH-HHHhHHHHHHHHHHHhccccchhHH----HHHHHHHHHHHH
Q 017456 102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLI-IASQLAFTAAFAFLLVKQKLTSYSL----NAVFLLTLGAVV 176 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli-~ssql~Ftalfs~l~~kek~t~~~i----~~vvLl~~Ga~l 176 (371)
+|.+.+..++..|++++..+..=.-+.+++.+|-+.=+ .-+|++-+.+|+.+.++|=-+..++ .++++..+|+.+
T Consensus 54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l 133 (288)
T COG4975 54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL 133 (288)
T ss_pred cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence 56688999999999999997777678877766655332 3679999999999999998888775 355666666555
Q ss_pred HhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 017456 177 LGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELT 218 (371)
Q Consensus 177 l~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~ 218 (371)
-...+..++ ++++.+++--|+...+.+++.|-.|-.+.|..
T Consensus 134 Ts~~~~~nk-~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f 174 (288)
T COG4975 134 TSKQDRNNK-EEENPSNLKKGIVILLISTLGYVGYVVLFQLF 174 (288)
T ss_pred eeeeccccc-cccChHhhhhheeeeeeeccceeeeEeeeccc
Confidence 454443222 22344567789998899999999988885443
No 89
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=82.20 E-value=4.7 Score=38.61 Aligned_cols=56 Identities=18% Similarity=0.210 Sum_probs=45.2
Q ss_pred HHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 017456 119 LDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGA 174 (371)
Q Consensus 119 ~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga 174 (371)
+.+++-..-..+-.+-+-|++.++.=.||.+.|.++++.+++.+||+|-++.+.+.
T Consensus 253 LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL 308 (337)
T KOG1580|consen 253 LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSAL 308 (337)
T ss_pred hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHh
Confidence 33333333666666667788999999999999999999999999999999887664
No 90
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=81.49 E-value=12 Score=38.11 Aligned_cols=71 Identities=14% Similarity=0.228 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456 109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT 181 (371)
Q Consensus 109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~ 181 (371)
+..++|- .+.+++|.+|.-.+++-+.++=.+.|.+..+++-.++-++++|+..++|.+..++|-+++...+
T Consensus 322 ~~~ligt--vvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 322 FNNLIGT--VVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HhhHHHH--HHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 3335555 7789999999999999999999999999999999999999999999999999888876665444
No 91
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=81.38 E-value=35 Score=29.55 Aligned_cols=106 Identities=20% Similarity=0.203 Sum_probs=67.4
Q ss_pred CCcchhHHHHHhhhchhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHH
Q 017456 45 GGKRIWFSSWLETAGCPVILIPITVSYLQRRRSGTTTDHESSTSSQPSNNDDNKLILMRPPVFFASAIIGILTGLDNYLY 124 (371)
Q Consensus 45 ~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~n~Ly 124 (371)
-|+-.+-+.+.+..|+..+++.+++.. +++. .+ -+ .. |+-....-.+|..+..-+
T Consensus 27 ~gs~~~as~i~~~~G~i~~~i~~~~~~--~~~~----~~------------~~---~~-p~w~~lGG~lG~~~V~~~--- 81 (138)
T PF04657_consen 27 LGSPLVASFISFGVGFILLLIILLITG--RPSL----AS------------LS---SV-PWWAYLGGLLGVFFVLSN--- 81 (138)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHhc--cccc----ch------------hc---cC-ChHHhccHHHHHHHHHHH---
Confidence 344455555667888888776555531 1111 00 00 12 233344555665443332
Q ss_pred HhccCCCChhHH-HHHHHHhHHHHHHHHHH----HhccccchhHHHHHHHHHHHHH
Q 017456 125 AYGVARLPVSTS-SLIIASQLAFTAAFAFL----LVKQKLTSYSLNAVFLLTLGAV 175 (371)
Q Consensus 125 ~~gl~ylpvst~-sli~ssql~Ftalfs~l----~~kek~t~~~i~~vvLl~~Ga~ 175 (371)
.+..+.+.++.. .+...-|++..+++..+ .-|+|++++++.|++++.+|+.
T Consensus 82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 345567777776 45566799999999987 6799999999999999999975
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=79.13 E-value=3.7 Score=33.07 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHH
Q 017456 309 VLLPVTEILAVIFYKEKFQAEKGVSLALS 337 (371)
Q Consensus 309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lv 337 (371)
.....+.+.++++|||++|..|++|..++
T Consensus 65 ~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 65 LGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33345668999999999999999998874
No 93
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=79.10 E-value=60 Score=32.68 Aligned_cols=75 Identities=21% Similarity=0.377 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCC----hhHHHHHHHHhHHHHHHHHHHHhcc------ccchhHHHHHHHHHHH
Q 017456 104 PPVFFASAIIGILTGLDNYLYAYGVARLP----VSTSSLIIASQLAFTAAFAFLLVKQ------KLTSYSLNAVFLLTLG 173 (371)
Q Consensus 104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylp----vst~sli~ssql~Ftalfs~l~~ke------k~t~~~i~~vvLl~~G 173 (371)
.+..+.+++-|++...+.+.|..|=+.++ .+...+..++..+|.-+-+.++ || |--+.-+.|++++.++
T Consensus 256 ~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l-kEWKg~s~kt~~vl~~G~~vlI~s 334 (344)
T PF06379_consen 256 LKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL-KEWKGASKKTIRVLVLGIAVLILS 334 (344)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH-HHhccCCcccHHHHHHHHHHHHHH
Confidence 47788999999999999999999988877 4455666666666655555444 33 3333445555555555
Q ss_pred HHHHhc
Q 017456 174 AVVLGL 179 (371)
Q Consensus 174 a~ll~~ 179 (371)
+++++.
T Consensus 335 ~~ivG~ 340 (344)
T PF06379_consen 335 VVIVGY 340 (344)
T ss_pred HHHHhc
Confidence 555543
No 94
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=77.73 E-value=0.91 Score=45.03 Aligned_cols=64 Identities=16% Similarity=0.090 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 115 ILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 115 ~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
++..+.|+.-.+-+..+++-|+++....+-++..+.++++++++.|+.++.|..++.+|..+=.
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 4444445555569999999999999999999999999999999999999999999999965543
No 95
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=77.46 E-value=17 Score=35.69 Aligned_cols=57 Identities=12% Similarity=0.258 Sum_probs=46.3
Q ss_pred HHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 121 NYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 121 n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
...|..+-. ++.-|-|++....=.+..++|.+.++..+|++.++|..+.++|..+.+
T Consensus 257 kgVy~L~te-~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 257 KGVYILTTE-TSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred Hhhhhhhce-ecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 334443333 555566788888999999999999999999999999999999998876
No 96
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=75.30 E-value=0.58 Score=45.35 Aligned_cols=54 Identities=24% Similarity=0.283 Sum_probs=44.6
Q ss_pred HHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccchhhhh
Q 017456 303 SAIIIAVLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKMK 356 (371)
Q Consensus 303 ~~vv~t~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~~k~~ 356 (371)
-.++.++.-|+ +.++|+++++|+++.....+..+.+.|++..+...+.-....+
T Consensus 125 DA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~ 179 (346)
T KOG4510|consen 125 DAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE 179 (346)
T ss_pred heEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence 34555677797 6699999999999999999999999999998888876554443
No 97
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=71.40 E-value=7.3 Score=33.37 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccchhhh
Q 017456 303 SAIIIAVLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNKKKM 355 (371)
Q Consensus 303 ~~vv~t~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~~k~ 355 (371)
......+.+|+..++...+.+..+......+.+..+.|++.+..--+..+|+.
T Consensus 69 ~aa~l~Y~lPll~li~g~~l~~~~~~~e~~~~l~~l~~l~~~~~~~~~~~~~~ 121 (135)
T PF04246_consen 69 KAAFLVYLLPLLALIAGAVLGSYLGGSELWAILGGLLGLALGFLILRLFDRRL 121 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34445677788775555555555555566666666666666644444333333
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=71.31 E-value=1.6 Score=41.80 Aligned_cols=74 Identities=19% Similarity=0.316 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHH----HHHHHHHHHHHHh
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLN----AVFLLTLGAVVLG 178 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~----~vvLl~~Ga~ll~ 178 (371)
|....-..-|++++..|+.+..+-+..-++|+=-+.|+..+...+.+.+++|||=|++.+. |+++..+|+++++
T Consensus 207 K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 207 KYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred HHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 4555667789999999999998998888888888899999999999999999999998754 5555566665554
No 99
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.59 E-value=86 Score=27.85 Aligned_cols=123 Identities=15% Similarity=0.263 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH-HHHHccchhhhhhhhhhhccccchhH
Q 017456 196 VGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTV-GMVVNKDFQAIGKEARAYTLGEGKYY 274 (371)
Q Consensus 196 ~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~v-g~~~~g~~~~l~~e~~~f~~g~~~y~ 274 (371)
+..++++.|+++-.+--.++-+..|.. . .++--.+....+.+..+++ ..+..+. +... . .++...|
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~----~--spl~As~isf~vGt~~L~~l~l~~~~~-~~~a-----~-~~~~pwW 71 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYL----G--SPLLASLISFLVGTVLLLILLLIKQGH-PGLA-----A-VASAPWW 71 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHc----C--ChHHHHHHHHHHHHHHHHHHHHHhcCC-Cchh-----h-ccCCchH
Confidence 445555555555555444443333322 1 1233444456677766664 4443332 1221 1 1121122
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhchhhHH----HHHHHHHHHHHH--HHHHHH-----hC---CCCchhHHHHHHHHHHH
Q 017456 275 AVVVASALIWQCFFLGAIGVIYCGSSLLS----AIIIAVLLPVTE--ILAVIF-----YK---EKFQAEKGVSLALSLWG 340 (371)
Q Consensus 275 ~~lv~~av~~q~~~~g~~Glv~~~ssl~~----~vv~t~~lPvt~--ilavl~-----fg---e~~t~~k~ig~~Lvl~G 340 (371)
. ..=|+.|.++.+++... |...+..+++.. +.+.+. || .+++..|.+|.++++.|
T Consensus 72 ~-----------~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~g 140 (150)
T COG3238 72 A-----------WIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAG 140 (150)
T ss_pred H-----------HHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHH
Confidence 1 12345566665555432 444555556655 344443 11 67999999999999999
Q ss_pred HH
Q 017456 341 FA 342 (371)
Q Consensus 341 ~~ 342 (371)
..
T Consensus 141 il 142 (150)
T COG3238 141 IL 142 (150)
T ss_pred HH
Confidence 33
No 100
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.15 E-value=0.76 Score=45.46 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017456 309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASY 344 (371)
Q Consensus 309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y 344 (371)
+.+++++++|..+++|+++..-.+|+++++.|-...
T Consensus 99 lsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 99 LSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 444667899999999999999999999999776554
No 101
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=65.53 E-value=7.6 Score=38.33 Aligned_cols=70 Identities=11% Similarity=0.148 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 017456 104 PPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV 176 (371)
Q Consensus 104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~l 176 (371)
.++++++..+|. .++++.|. -++.--+-+.+.|..+.=+|+++.+-+.+++++++.|+.|+.+.+.|..+
T Consensus 241 ~~Di~l~s~~ga--vGQ~FI~~-TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 241 AFDILLYSTCGA--VGQLFIFY-TIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHHhhh--hhhheehh-hHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 378888888898 78888885 77777777889999999999999999999999999999999987777543
No 102
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=60.52 E-value=51 Score=31.57 Aligned_cols=73 Identities=16% Similarity=0.250 Sum_probs=45.9
Q ss_pred HHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017456 140 IASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLME 216 (371)
Q Consensus 140 ~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e 216 (371)
+..+.++..+|-+.=-|+| +......+.+..+|++++...-..+++ .++...+|.+|+...-..||.=+..+.
T Consensus 76 ~~ie~~Yi~~f~~ya~~k~-~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~lG~vc~~~nI~~~~sPL~~m~ 148 (243)
T KOG1623|consen 76 LVIETVYISIFLYYAPKKK-TVKIVLALVLGVIGLIILLTLLLFHDP---ERRVSVLGIVCAVFNISMFAAPLSVIR 148 (243)
T ss_pred HHHHHHHHHHHheecCchh-eeEeeehHHHHHHHHHHHHHHHhcCCc---ceeeeeeehhhhhhhHHhhhccHHhhh
Confidence 3456667777777777777 555555666666665554322221111 123467999999999999998776654
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=53.42 E-value=2.4e+02 Score=28.07 Aligned_cols=134 Identities=18% Similarity=0.265 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHH---HHccchhhhhh-hhhhhccccchhHHHH
Q 017456 202 IGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGM---VVNKDFQAIGK-EARAYTLGEGKYYAVV 277 (371)
Q Consensus 202 l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~---~~~g~~~~l~~-e~~~f~~g~~~y~~~l 277 (371)
+.+++.|++--+++-.+.|-++..++|..-+-+..+.++++++...++- +++ ++.+.. +++.|.--.
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~--~~~l~~~~~kk~~P~~------- 84 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVN--FRPLDLRTAKKWFPVS------- 84 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceee--cCCcChHHHHHHccHH-------
Confidence 5688889988888888888787777775555554455555544444322 222 222322 233221111
Q ss_pred HHHHHHHHHHHHhhhhhhhhchhhHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccc
Q 017456 278 VASALIWQCFFLGAIGVIYCGSSLLSAIIIAVLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEI 349 (371)
Q Consensus 278 v~~av~~q~~~~g~~Glv~~~ssl~~~vv~t~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~ 349 (371)
.+-..-.+-|..++.+.-...+. +.=-.. |+ +++..+++||-+++..-+.+..+.+.|-..+.....
T Consensus 85 ---~lf~~~i~t~~~slk~lnVpm~t-v~kn~t-ii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~ 152 (314)
T KOG1444|consen 85 ---LLFVGMLFTGSKSLKYLNVPMFT-VFKNLT-IILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL 152 (314)
T ss_pred ---HHHHHHHHHccccccccCchHHH-HHhhch-HHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc
Confidence 01111112333334333222221 110111 54 679999999988888888888888877776655443
No 104
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=53.13 E-value=6.6 Score=36.66 Aligned_cols=38 Identities=24% Similarity=0.277 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017456 309 VLLPVTEILAVIFYKEKFQAEKGVSLALSLWGFASYFY 346 (371)
Q Consensus 309 ~~lPvt~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y 346 (371)
+-...+-++++++++|++.+.|+++.++++-|++...|
T Consensus 88 CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 88 CNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred hhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 44456679999999999999999999999999876544
No 105
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=52.13 E-value=1.9e+02 Score=26.49 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=15.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccC
Q 017456 104 PPVFFASAIIGILTGLDNYLYAYGVA 129 (371)
Q Consensus 104 ~~~~~~~~~~G~l~~~~n~Ly~~gl~ 129 (371)
++.+.+.+..|+...-+-..|.-+..
T Consensus 112 ~~~~~lg~~~~~~~~~~~~~~laa~~ 137 (214)
T PF11139_consen 112 GGAFWLGFVLGLANPKTMLPYLAAIA 137 (214)
T ss_pred hhHHHHHHHHHHhccccHHHHHHHHH
Confidence 46666666666666556566654443
No 106
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=47.89 E-value=68 Score=30.72 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=60.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
++.--+...+..|+.-.+-.+.-.|-++-++..+++.+.+..=.--++-+.+++.++.++.++.++.+.+++-++-+
T Consensus 219 l~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa 295 (309)
T COG5070 219 LSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA 295 (309)
T ss_pred CChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 33334556667788777778888888998999999999998888888888899999999999888888776655444
No 107
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=45.85 E-value=2.3e+02 Score=27.33 Aligned_cols=113 Identities=18% Similarity=0.196 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHH-hHHHHHHHHHH-Hh---ccc--cchhHHHHHHHHHHHHHHHhc-c
Q 017456 109 ASAIIGILTGLDNYLYAYGVARLPVSTSSLIIAS-QLAFTAAFAFL-LV---KQK--LTSYSLNAVFLLTLGAVVLGL-H 180 (371)
Q Consensus 109 ~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ss-ql~Ftalfs~l-~~---kek--~t~~~i~~vvLl~~Ga~ll~~-~ 180 (371)
++++-|.+++..|.+-.-.++.+-.+..-++-.+ +.+.-=.-+.| ++ +|. -++...+|+++..+|..+..+ .
T Consensus 57 ~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 57 WAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred HHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeec
Confidence 6666777777777776666666666555555444 33222222222 22 222 345667788888888777653 1
Q ss_pred cCC-------C--------------CC---CCcc-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017456 181 TNG-------D--------------RP---DNES-------ARQYLVGFLMTIGAAVLYGFVLPLMELTYKR 221 (371)
Q Consensus 181 ~~s-------~--------------~~---~~~s-------~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk 221 (371)
++. + ++ ++.+ .++.++|..+++.++++||..+.=.+...++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 137 SEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred CCCCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 100 0 00 0001 1257899999999999999976665555443
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=44.91 E-value=4e+02 Score=28.07 Aligned_cols=52 Identities=17% Similarity=0.188 Sum_probs=26.6
Q ss_pred ccCCCChhHHHHHHHHhHHHHH-HHHHHHhccccchhHHH--HHHHHHHHHHHHh
Q 017456 127 GVARLPVSTSSLIIASQLAFTA-AFAFLLVKQKLTSYSLN--AVFLLTLGAVVLG 178 (371)
Q Consensus 127 gl~ylpvst~sli~ssql~Fta-lfs~l~~kek~t~~~i~--~vvLl~~Ga~ll~ 178 (371)
.++....-....+.......-. +..+-.+.+|+.++++. +.++..+|..++-
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~ 320 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY 320 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 3343333333344444443333 56666677888877753 4444455544444
No 109
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=43.89 E-value=2.4e+02 Score=25.86 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHccc
Q 017456 196 VGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATLVCTVGMVVNKD 255 (371)
Q Consensus 196 ~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~~~~vg~~~~g~ 255 (371)
.|...++.+|+..++....-++. |+++.. +...++++..++..-...+||
T Consensus 25 ~~L~~aliaA~~~a~~~~v~RL~-----r~~~~~-----~a~~gl~gV~i~a~~A~~tG~ 74 (187)
T PF11361_consen 25 FGLTPALIAALAVAVVIVVWRLV-----RRESVQ-----PALSGLFGVAISAAIAWRTGS 74 (187)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH-----hcCccH-----HHHHHHHHHHHHHHHHHHHCC
Confidence 45567777888888866664433 444321 334566677666655556665
No 110
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=43.05 E-value=3.4e+02 Score=26.82 Aligned_cols=128 Identities=18% Similarity=0.217 Sum_probs=72.7
Q ss_pred ccccchhHHHHHHHHHHHHHhhhchHHHHHHHHHhcCCcchhHHHHHhhhch---hhHHHHHHHhhhhcCCCCCCCCCCC
Q 017456 9 KSKKTTMKIALLILNIILLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGC---PVILIPITVSYLQRRRSGTTTDHES 85 (371)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~agf---p~l~~~~~~~~~~~~~~~~~~~~~~ 85 (371)
|.+.+.++......++.+++++.+.+.+++++... .|+.-.+-..|- --+.+|....|..+++. ..
T Consensus 94 P~~~~~~~i~~tF~~ssIlLl~~Siss~iG~YiLa-----pl~~~i~~~~gAaila~iviP~~~~y~ln~~~-----~s- 162 (299)
T PF05884_consen 94 PEKLSTSSIVETFSWSSILLLGFSISSFIGGYILA-----PLFGIIFGPFGAAILAYIVIPLIAYYYLNKED-----GS- 162 (299)
T ss_pred CcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhcchhHHHHHHHHHHHHHHhhccccc-----Cc-
Confidence 66677777888888888899998899998888753 344433333332 23346666655332221 10
Q ss_pred CCCCCCCCCCCCccccCCh-hHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHHHHHhccccchhHH
Q 017456 86 STSSQPSNNDDNKLILMRP-PVFFASAIIGILTGLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSL 164 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs~l~~kek~t~~~i 164 (371)
.. -+| -++..++.=|++++. +++|+.... .=+....++++.+...++..+.-+|.++
T Consensus 163 ----------~~----~~R~~ll~~a~~QGvL~Ga-------~ls~~~l~s-ePf~~LT~iv~sfi~~~i~~~~~~R~~l 220 (299)
T PF05884_consen 163 ----------LA----ESRLALLFFALFQGVLVGA-------GLSHLYLSS-EPFIALTPIVSSFIYPLIAGHGTNRQKL 220 (299)
T ss_pred ----------hH----HHHHHHHHHHHHHHHHHHH-------HhhcccccC-CcHHHHHHHHHHHHHHHHccCCcchHHH
Confidence 00 011 134455555665554 333322221 3344566677766666777667788887
Q ss_pred HHHHH
Q 017456 165 NAVFL 169 (371)
Q Consensus 165 ~~vvL 169 (371)
++.+.
T Consensus 221 Lg~~v 225 (299)
T PF05884_consen 221 LGIVV 225 (299)
T ss_pred HHHHH
Confidence 77654
No 111
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=41.11 E-value=1e+02 Score=27.73 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 017456 165 NAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATL 244 (371)
Q Consensus 165 ~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~ 244 (371)
.+++.+..|.=++....--+| ..+++|-..|-.+.+.+-++.+.-+ ..|--+.+..-...-....||.-+.|+.
T Consensus 93 lAVV~AIFGLElLmvSQvcEd--~~SrrKWamGs~LlLvsfvlSs~Gl----lsFviLL~~~vtl~GFTL~fWCeFtAsF 166 (184)
T PF15108_consen 93 LAVVVAIFGLELLMVSQVCED--AHSRRKWAMGSVLLLVSFVLSSGGL----LSFVILLRNQVTLIGFTLMFWCEFTASF 166 (184)
T ss_pred HHHHHHHHhHHHHHHHHHHhc--chhhhhhhhhhHHHHHHHHHhcccH----HHHHHHHhcchhhhhhHHHHHHHHHHHH
Confidence 445556666655544332222 2356777899999998888776522 2222222222222334788998888886
Q ss_pred HHHH
Q 017456 245 VCTV 248 (371)
Q Consensus 245 ~~~v 248 (371)
.+..
T Consensus 167 LfFL 170 (184)
T PF15108_consen 167 LFFL 170 (184)
T ss_pred HHHH
Confidence 6553
No 112
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=38.31 E-value=43 Score=29.64 Aligned_cols=13 Identities=8% Similarity=0.238 Sum_probs=6.1
Q ss_pred HHHHHhccccchh
Q 017456 341 FASYFYGEIKNKK 353 (371)
Q Consensus 341 ~~~y~y~~~~~~~ 353 (371)
+..|.+.++.++|
T Consensus 115 ~~g~~~~r~~~~~ 127 (154)
T PRK10862 115 VGGFLLARGLSRK 127 (154)
T ss_pred HHHHHHHHHHHHh
Confidence 4445555544433
No 113
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=38.24 E-value=11 Score=37.05 Aligned_cols=126 Identities=12% Similarity=0.215 Sum_probs=0.0
Q ss_pred HHHHHHHHhccCCCChhHHHHHHHHhHHHHHHHH-HHHhccc-cchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhH
Q 017456 118 GLDNYLYAYGVARLPVSTSSLIIASQLAFTAAFA-FLLVKQK-LTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYL 195 (371)
Q Consensus 118 ~~~n~Ly~~gl~ylpvst~sli~ssql~Ftalfs-~l~~kek-~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~ 195 (371)
+.-.++|. -++-++-+..+++++-.++...+.- .+++|+| +-+.-.+++++.++-..+..+-. .+++..+
T Consensus 35 ail~w~~i-imsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~t-------LtGQ~LF 106 (381)
T PF05297_consen 35 AILVWFFI-IMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWT-------LTGQTLF 106 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-HHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHH-------hhccHHH
Confidence 33345554 4444555556666665554443332 2333444 45666777776554332222211 1223356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH-HHHHHHHHccch
Q 017456 196 VGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQMVMCLFATL-VCTVGMVVNKDF 256 (371)
Q Consensus 196 ~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q~~~slvat~-~~~vg~~~~g~~ 256 (371)
+|+++.+....+-=..++++++. |++ ..+.|--+.|+.+++-.+ ++.+.++....|
T Consensus 107 ~Gi~~l~l~~lLaL~vW~Ym~lL-r~~----GAs~WtiLaFcLAF~LaivlLIIAv~L~qaW 163 (381)
T PF05297_consen 107 VGIVILFLCCLLALGVWFYMWLL-REL----GASFWTILAFCLAFLLAIVLLIIAVLLHQAW 163 (381)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77764443322222233334433 334 333444444444433333 333455444433
No 114
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=37.34 E-value=4e+02 Score=25.90 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=18.0
Q ss_pred HHHhhhchHHHHHHHHHhcCCcchhHHHHHhhhchhh
Q 017456 26 LLAIGNCAGPLIMRLYFLHGGKRIWFSSWLETAGCPV 62 (371)
Q Consensus 26 ~~~~g~~~~~Ll~r~y~~~~g~~~w~~t~vq~agfp~ 62 (371)
...+|...++++..+..++.| |-..+.-.+...+
T Consensus 135 ~~~i~~~~~~~i~~~l~~~~g---~~~~~~~~~~~~~ 168 (392)
T PRK10473 135 ITCIIPVLAPVLGHLIMLKFP---WQSLFYTMAAMGI 168 (392)
T ss_pred HHHHHHHHHHHHHHHHHhCcC---hHHHHHHHHHHHH
Confidence 344555667777766555544 5444444434433
No 115
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=37.31 E-value=99 Score=26.09 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017456 312 PVTEILAVIFYKEKFQAEKGVSLALSLWGFA 342 (371)
Q Consensus 312 Pvt~ilavl~fge~~t~~k~ig~~Lvl~G~~ 342 (371)
..|.+.+.++.+|..+...++|+++++.|+.
T Consensus 80 vfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~ 110 (113)
T PF10639_consen 80 VFTALTGWLLGEEVISRRTWLGMALILAGVA 110 (113)
T ss_pred HHHHHHHHHhcCcccchhHHHHHHHHHcCee
Confidence 3456778777777778889999999999875
No 116
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=35.84 E-value=86 Score=27.76 Aligned_cols=7 Identities=14% Similarity=0.586 Sum_probs=3.2
Q ss_pred HHHHHHH
Q 017456 309 VLLPVTE 315 (371)
Q Consensus 309 ~~lPvt~ 315 (371)
+..|+..
T Consensus 82 Yi~PL~~ 88 (150)
T COG3086 82 YIFPLVG 88 (150)
T ss_pred HHHHHHH
Confidence 4445433
No 117
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=34.19 E-value=3.9e+02 Score=24.88 Aligned_cols=26 Identities=19% Similarity=0.207 Sum_probs=17.9
Q ss_pred HHHHHHHHhhhchHHHHHHHHHhcCC
Q 017456 21 ILNIILLAIGNCAGPLIMRLYFLHGG 46 (371)
Q Consensus 21 ~~~~~~~~~g~~~~~Ll~r~y~~~~g 46 (371)
.+......+|...++++.-+-.++.|
T Consensus 124 ~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 124 GILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred ccccchhhhhhhcccchhhhhhhccc
Confidence 44555666777788888887665555
No 118
>PRK01844 hypothetical protein; Provisional
Probab=33.62 E-value=62 Score=25.20 Aligned_cols=28 Identities=21% Similarity=0.436 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHhc
Q 017456 17 IALLILNIILLAIGNCAGPLIMRLYFLH 44 (371)
Q Consensus 17 ~~~~~~~~~~~~~g~~~~~Ll~r~y~~~ 44 (371)
|+.+.+-++.+++|-.++..+.|.|+.+
T Consensus 4 ~~~I~l~I~~li~G~~~Gff~ark~~~k 31 (72)
T PRK01844 4 WLGILVGVVALVAGVALGFFIARKYMMN 31 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556667788899999999999999774
No 119
>COG0341 SecF Preprotein translocase subunit SecF [Intracellular trafficking and secretion]
Probab=32.70 E-value=5e+02 Score=25.70 Aligned_cols=76 Identities=16% Similarity=0.275 Sum_probs=41.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH
Q 017456 156 KQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGFVLPLMELTYKRARQEITYALVLEIQ 235 (371)
Q Consensus 156 kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~alyl~l~e~~~kk~~k~~~~~~vle~q 235 (371)
++.+...-+.+++++++|..+-..-.. +..+.+|.++++.-=+...+ +=. .+..+.
T Consensus 129 g~eL~~~~~~Al~~alv~I~iYV~~RF--------e~~~a~aaI~al~hDvii~~----g~~------------slfgiE 184 (305)
T COG0341 129 GKELARQGLLALLLALVGILIYVFFRF--------EWRFALAAILALLHDVIITL----GFF------------SLFGIE 184 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheee--------ehHHHHHHHHHHHHHHHHHH----HHH------------HHhhee
Confidence 566667777888888887666553322 12244555555442222222 111 111222
Q ss_pred HHHHHHHHHHHHHHHHHccc
Q 017456 236 MVMCLFATLVCTVGMVVNKD 255 (371)
Q Consensus 236 ~~~slvat~~~~vg~~~~g~ 255 (371)
+=...+|.+..++|.-++.+
T Consensus 185 ~~l~~IAAlLtiIGYSvNDt 204 (305)
T COG0341 185 FNLATIAALLTIIGYSVNDT 204 (305)
T ss_pred ecHHHHHHHHHHeeeccCCe
Confidence 22356788888899888875
No 120
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=32.69 E-value=36 Score=27.04 Aligned_cols=19 Identities=21% Similarity=0.134 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 017456 331 GVSLALSLWGFASYFYGEI 349 (371)
Q Consensus 331 ~ig~~Lvl~G~~~y~y~~~ 349 (371)
.+|+++.++|...++++..
T Consensus 7 l~~l~lliig~~~~v~~~G 25 (92)
T PF13038_consen 7 LVGLILLIIGGFLFVFQSG 25 (92)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 5777777777777777643
No 121
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=32.11 E-value=1.2e+02 Score=28.70 Aligned_cols=15 Identities=33% Similarity=0.281 Sum_probs=10.7
Q ss_pred HHhhhchHHHHHHHH
Q 017456 27 LAIGNCAGPLIMRLY 41 (371)
Q Consensus 27 ~~~g~~~~~Ll~r~y 41 (371)
.++|-..|.+..+..
T Consensus 19 ~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 19 GLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHH
Confidence 456667777777777
No 122
>PF13347 MFS_2: MFS/sugar transport protein
Probab=30.72 E-value=4.7e+02 Score=26.03 Aligned_cols=16 Identities=6% Similarity=0.094 Sum_probs=8.4
Q ss_pred HhccccchhHHHHHHH
Q 017456 154 LVKQKLTSYSLNAVFL 169 (371)
Q Consensus 154 ~~kek~t~~~i~~vvL 169 (371)
.+.+|+.+++...+..
T Consensus 282 ~l~~r~gk~~~~~~~~ 297 (428)
T PF13347_consen 282 RLSKRFGKKKVYIIGL 297 (428)
T ss_pred HHHHHccceeehhhhH
Confidence 3456666666544433
No 123
>PRK14397 membrane protein; Provisional
Probab=30.63 E-value=4.7e+02 Score=24.74 Aligned_cols=18 Identities=6% Similarity=0.257 Sum_probs=9.5
Q ss_pred HHHHccchhhhhhhhhhhcccc
Q 017456 249 GMVVNKDFQAIGKEARAYTLGE 270 (371)
Q Consensus 249 g~~~~g~~~~l~~e~~~f~~g~ 270 (371)
...+.+.|+.+ -.|+-|+
T Consensus 87 aavlGH~fPi~----l~FkGGK 104 (222)
T PRK14397 87 AALLGHLYSCF----LGFRGGK 104 (222)
T ss_pred HHHHcccchhh----hcCCCcc
Confidence 33455566533 3566666
No 124
>PRK14409 membrane protein; Provisional
Probab=30.61 E-value=4.5e+02 Score=24.48 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=9.1
Q ss_pred HHHHccchhhhhhhhhhhcccc
Q 017456 249 GMVVNKDFQAIGKEARAYTLGE 270 (371)
Q Consensus 249 g~~~~g~~~~l~~e~~~f~~g~ 270 (371)
...+.+.|+.+ -.|+-|+
T Consensus 88 ~avlGH~~pi~----l~FkGGK 105 (205)
T PRK14409 88 VAVLGHMFSPF----LGFKGGK 105 (205)
T ss_pred HHHHccCChHH----hcCCCcc
Confidence 33455556533 3566665
No 125
>PRK02935 hypothetical protein; Provisional
Probab=29.33 E-value=65 Score=26.94 Aligned_cols=55 Identities=24% Similarity=0.236 Sum_probs=32.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHhcccCCCCCCCcchhhhHHHHHHHHHHHHHHHH
Q 017456 156 KQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDNESARQYLVGFLMTIGAAVLYGF 210 (371)
Q Consensus 156 kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~~s~~~~~~G~~l~l~Aa~~~al 210 (371)
.-|+++.+-.|+.+.++|.+++..+-.-..+.-.-.--.++|+++.++|.+.|--
T Consensus 6 ssKINkiRt~aL~lvfiG~~vMy~Giff~~~~~~m~ifm~~G~l~~l~S~vvYFw 60 (110)
T PRK02935 6 SNKINKIRTFALSLVFIGFIVMYLGIFFRESIIIMTIFMLLGFLAVIASTVVYFW 60 (110)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888889999999998776533211000000011235677777776665544
No 126
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=29.13 E-value=1.3e+02 Score=21.40 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=30.1
Q ss_pred HHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccccch
Q 017456 309 VLLPV-TEILAVIFYKEKFQAEKGVSLALSLWGFASYFYGEIKNK 352 (371)
Q Consensus 309 ~~lPv-t~ilavl~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~~~ 352 (371)
...|+ .....=...+++++...+.-.+.++.|++.=.|.-|+.-
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~g~~~~~~~~ 54 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAAGFYNVYRLV 54 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 44454 335555556788888788888888888888777766543
No 127
>PRK00523 hypothetical protein; Provisional
Probab=28.97 E-value=82 Score=24.53 Aligned_cols=28 Identities=29% Similarity=0.322 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHhc
Q 017456 17 IALLILNIILLAIGNCAGPLIMRLYFLH 44 (371)
Q Consensus 17 ~~~~~~~~~~~~~g~~~~~Ll~r~y~~~ 44 (371)
|+.+.+.++.+++|-.++..+.|.|+.+
T Consensus 5 ~l~I~l~i~~li~G~~~Gffiark~~~k 32 (72)
T PRK00523 5 GLALGLGIPLLIVGGIIGYFVSKKMFKK 32 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556666777899999999999999874
No 128
>PF15471 TMEM171: Transmembrane protein family 171
Probab=28.93 E-value=46 Score=32.40 Aligned_cols=28 Identities=11% Similarity=0.269 Sum_probs=23.4
Q ss_pred hhHHHHHHHHHHHHHHHHhccccchhhh
Q 017456 328 AEKGVSLALSLWGFASYFYGEIKNKKKM 355 (371)
Q Consensus 328 ~~k~ig~~Lvl~G~~~y~y~~~~~~~k~ 355 (371)
..|++|-++++.|++.++..+.|+.+..
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKKr~nl 188 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKKRNNL 188 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeeeccCC
Confidence 4689999999999999999888766543
No 129
>PRK02237 hypothetical protein; Provisional
Probab=28.93 E-value=1.1e+02 Score=25.68 Aligned_cols=33 Identities=6% Similarity=0.126 Sum_probs=27.2
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456 149 AFAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT 181 (371)
Q Consensus 149 lfs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~ 181 (371)
+..+++-++|.+++-+.|..++.+|+.++.+.+
T Consensus 75 ~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 75 LWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 344556699999999999999999998887654
No 130
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=28.62 E-value=81 Score=26.41 Aligned_cols=29 Identities=14% Similarity=0.026 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHH
Q 017456 312 PVTEILAVIFYKEKFQAEKGVSLALSLWG 340 (371)
Q Consensus 312 Pvt~ilavl~fge~~t~~k~ig~~Lvl~G 340 (371)
-+...+++++++|++++....|.++.+.+
T Consensus 74 ~vF~~Fsv~~l~E~l~~n~l~af~~i~~a 102 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWNYLWAFLCILGA 102 (108)
T ss_pred heeHHHHHHHhCCCccHHHHHHHHHHHHh
Confidence 34558889999999999999999888754
No 131
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=27.84 E-value=59 Score=25.03 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=14.3
Q ss_pred CCCchhHHH--HHHH-HHHHHHHHHhccccchh
Q 017456 324 EKFQAEKGV--SLAL-SLWGFASYFYGEIKNKK 353 (371)
Q Consensus 324 e~~t~~k~i--g~~L-vl~G~~~y~y~~~~~~~ 353 (371)
|.+++.++. |.+- ++.|++.|+-.-|-+.|
T Consensus 26 d~~sp~qW~aIGvi~gi~~~~lt~ltN~YFK~k 58 (68)
T PF04971_consen 26 DQFSPSQWAAIGVIGGIFFGLLTYLTNLYFKIK 58 (68)
T ss_pred hccCcccchhHHHHHHHHHHHHHHHhHhhhhhh
Confidence 666655554 2222 33455555555444333
No 132
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=27.46 E-value=1.3e+02 Score=29.98 Aligned_cols=31 Identities=13% Similarity=0.251 Sum_probs=16.1
Q ss_pred HHhCCCCchhHHHHHHHHHHHHHHHHhcccc
Q 017456 320 IFYKEKFQAEKGVSLALSLWGFASYFYGEIK 350 (371)
Q Consensus 320 l~fge~~t~~k~ig~~Lvl~G~~~y~y~~~~ 350 (371)
+..+++++....+.+.+.......|.++.++
T Consensus 118 ~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~~ 148 (325)
T PRK10734 118 VLYDGQLSRSDGIFLLLLAVLWLLFIVKIAR 148 (325)
T ss_pred HHHCCcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677765555555554444444444443
No 133
>PF10361 DUF2434: Protein of unknown function (DUF2434); InterPro: IPR018830 This entry represents a family of proteins conserved in fungi. Their function is not known.
Probab=26.35 E-value=5.6e+02 Score=25.28 Aligned_cols=56 Identities=16% Similarity=0.351 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHhhhhhhhhch
Q 017456 233 EIQMVMCLFATLVCTVGMVVNKDFQAIGKEARAYTLGEGKYYAVVVASALIWQCFFLGAIGVIYCGS 299 (371)
Q Consensus 233 e~q~~~slvat~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~~~lv~~av~~q~~~~g~~Glv~~~s 299 (371)
.+|.|..++.....+++.+.+-| ++ +.+-.|- .++-+.+.|+++..|...++-++.
T Consensus 88 RwqWyW~~fv~a~~~iS~f~~ID---VD---R~yl~~~-----piil~sfF~~l~~~~~lA~vWE~V 143 (296)
T PF10361_consen 88 RWQWYWMLFVCACGLISLFMSID---VD---RYYLQGL-----PIILQSFFWYLMQPGTLAAVWEAV 143 (296)
T ss_pred hHHHHHHHHHHHHHHHhhheeee---ec---HHhcccc-----cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999888777777788877765 22 2232332 355666788888888777766554
No 134
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=25.64 E-value=1e+02 Score=26.12 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=35.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHhcccCCCCCCC-cchhhhHHHHHHHHHHHHHHHHHHHH
Q 017456 156 KQKLTSYSLNAVFLLTLGAVVLGLHTNGDRPDN-ESARQYLVGFLMTIGAAVLYGFVLPL 214 (371)
Q Consensus 156 kek~t~~~i~~vvLl~~Ga~ll~~~~~s~~~~~-~s~~~~~~G~~l~l~Aa~~~alyl~l 214 (371)
+.|+|+.+-.|+.+.++|.+++..+-.- ++.. .-.--.++|+++++++++.|.....+
T Consensus 5 ~~KiN~~R~~al~lif~g~~vmy~gi~f-~~~~~im~ifmllG~L~~l~S~~VYfwIGml 63 (114)
T PF11023_consen 5 SSKINKIRTFALSLIFIGMIVMYIGIFF-KASPIIMVIFMLLGLLAILASTAVYFWIGML 63 (114)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhh-cccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4578888899999999998776543211 1100 01112457877777777777664444
No 135
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=24.83 E-value=6e+02 Score=24.02 Aligned_cols=21 Identities=10% Similarity=-0.107 Sum_probs=15.0
Q ss_pred CCCCchhHHHHHHHHHHHHHH
Q 017456 323 KEKFQAEKGVSLALSLWGFAS 343 (371)
Q Consensus 323 ge~~t~~k~ig~~Lvl~G~~~ 343 (371)
.-+.+..-..|-++.+.|+..
T Consensus 154 ~~~~~~p~~LG~~Mi~~Glyf 174 (224)
T PF09930_consen 154 RLKKPYPIILGNFMIFLGLYF 174 (224)
T ss_pred HhcCCCchHHHHHHHHHHHHH
Confidence 444455568999999998833
No 136
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=24.56 E-value=73 Score=23.74 Aligned_cols=16 Identities=31% Similarity=0.139 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHHHHHH
Q 017456 329 EKGVSLALSLWGFASY 344 (371)
Q Consensus 329 ~k~ig~~Lvl~G~~~y 344 (371)
.-++|+.+.+.|.+.|
T Consensus 8 ~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 8 ALFVGGFVGLIGAALY 23 (58)
T ss_pred hhhHHHHHHHHHHHHh
Confidence 4578999999999999
No 137
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=24.46 E-value=87 Score=26.25 Aligned_cols=30 Identities=30% Similarity=0.352 Sum_probs=23.1
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 017456 146 FTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV 176 (371)
Q Consensus 146 Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~l 176 (371)
.-+.|+.+++||++++..+.|-+.+ +|++.
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i-~~av~ 104 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCI-LGAVY 104 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHH-HHhhh
Confidence 3467889999999999999988775 44443
No 138
>KOG4026 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.17 E-value=6e+02 Score=23.80 Aligned_cols=24 Identities=17% Similarity=0.137 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Q 017456 231 VLEIQMVMCLFATLVCTVGMVVNK 254 (371)
Q Consensus 231 vle~q~~~slvat~~~~vg~~~~g 254 (371)
+.+|--|+..+|.+.+.+|.++--
T Consensus 109 i~~~cg~~q~~a~l~milGc~lyP 132 (207)
T KOG4026|consen 109 IFNMCGWMQGIAGLCMILGCALYP 132 (207)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcC
Confidence 458888888999988888888754
No 139
>COG5546 Small integral membrane protein [Function unknown]
Probab=23.67 E-value=1.7e+02 Score=22.98 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=25.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhccCCCCh
Q 017456 102 MRPPVFFASAIIGILTGLDNYLYAYGVARLPV 133 (371)
Q Consensus 102 ~~~~~~~~~~~~G~l~~~~n~Ly~~gl~ylpv 133 (371)
|..|.++.+++-++++.++++++.+|+. +|.
T Consensus 8 mknkvf~vail~~ifllAQqll~~fGI~-~~~ 38 (80)
T COG5546 8 MKNKVFLVAILGAIFLLAQQLLGWFGIK-LPS 38 (80)
T ss_pred ecCceehHHHHHHHHHHHHHHHHHeeee-cch
Confidence 4456778888889999999999999987 665
No 140
>TIGR00780 ccoN cytochrome c oxidase, cbb3-type, subunit I. Gene symbols ccoN and fixN are synonymous.
Probab=23.28 E-value=5.6e+02 Score=26.94 Aligned_cols=25 Identities=4% Similarity=0.150 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccc
Q 017456 231 VLEIQMVMCLFATLVCTVGMVVNKD 255 (371)
Q Consensus 231 vle~q~~~slvat~~~~vg~~~~g~ 255 (371)
..++++|...++......++.+.|-
T Consensus 379 L~~~hFWl~~iG~~l~~~~l~~~G~ 403 (474)
T TIGR00780 379 LVDFHFWIATIGIVLYFASMWIAGI 403 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999998888888877763
No 141
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=22.76 E-value=1.4e+02 Score=24.99 Aligned_cols=32 Identities=6% Similarity=0.200 Sum_probs=26.5
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhccc
Q 017456 150 FAFLLVKQKLTSYSLNAVFLLTLGAVVLGLHT 181 (371)
Q Consensus 150 fs~l~~kek~t~~~i~~vvLl~~Ga~ll~~~~ 181 (371)
-.+.+-++|.+++-++|..++.+|+.++.+.+
T Consensus 74 W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 74 WGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 34455599999999999999999998887665
No 142
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=22.60 E-value=5.9e+02 Score=23.20 Aligned_cols=16 Identities=19% Similarity=0.071 Sum_probs=10.3
Q ss_pred HHHHHHHHHhccccch
Q 017456 146 FTAAFAFLLVKQKLTS 161 (371)
Q Consensus 146 Ftalfs~l~~kek~t~ 161 (371)
..++..+.++|+|++-
T Consensus 188 ~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 188 VIAFALRFYLKKKYNI 203 (206)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 4556666777777664
No 143
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=22.24 E-value=1.7e+02 Score=28.89 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=39.6
Q ss_pred ChhHHHHHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 017456 132 PVSTSSLIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVVLG 178 (371)
Q Consensus 132 pvst~sli~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~ll~ 178 (371)
-+.++..+.+..=+.|.++|++++.+++|..-.-+..+...|+.+=.
T Consensus 285 GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ 331 (367)
T KOG1582|consen 285 GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNM 331 (367)
T ss_pred chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhc
Confidence 44556777788889999999999999999999999999888865543
No 144
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=21.86 E-value=1.2e+02 Score=26.22 Aligned_cols=25 Identities=8% Similarity=-0.137 Sum_probs=14.1
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhc
Q 017456 323 KEKFQAEKGVSLALSLWGFASYFYG 347 (371)
Q Consensus 323 ge~~t~~k~ig~~Lvl~G~~~y~y~ 347 (371)
+++-+..|++|.++.-.|+..-..+
T Consensus 74 n~~~si~~~~G~vlLs~GLmlL~~~ 98 (129)
T PF15099_consen 74 NSHGSIISIFGPVLLSLGLMLLACS 98 (129)
T ss_pred cCCcchhhhehHHHHHHHHHHHHhh
Confidence 5555556666666555555554443
No 145
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=21.84 E-value=66 Score=27.09 Aligned_cols=56 Identities=25% Similarity=0.315 Sum_probs=41.9
Q ss_pred HHHHHhccCCCChhHHH-HHHHHhHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 017456 121 NYLYAYGVARLPVSTSS-LIIASQLAFTAAFAFLLVKQKLTSYSLNAVFLLTLGAVV 176 (371)
Q Consensus 121 n~Ly~~gl~ylpvst~s-li~ssql~Ftalfs~l~~kek~t~~~i~~vvLl~~Ga~l 176 (371)
..+|.+-++..|.+.+. +-+++.-+||++++..+-.|-...+.+.|..+..+|+.+
T Consensus 66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 55666677777766553 455678899999999987777778888888888777654
No 146
>PHA03049 IMV membrane protein; Provisional
Probab=20.84 E-value=96 Score=23.74 Aligned_cols=27 Identities=19% Similarity=0.321 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHhccccchhhhhhhc
Q 017456 331 GVSLALSLWGFASYFYGEIKNKKKMKKRE 359 (371)
Q Consensus 331 ~ig~~Lvl~G~~~y~y~~~~~~~k~~~~~ 359 (371)
.+..+.++.|+.. |+-|.+.+-.+..+
T Consensus 7 l~iICVaIi~lIv--YgiYnkk~~~q~~~ 33 (68)
T PHA03049 7 LVIICVVIIGLIV--YGIYNKKTTTSQNP 33 (68)
T ss_pred HHHHHHHHHHHHH--HHHHhcccccCCCC
Confidence 3455666655555 55554444333333
No 147
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.38 E-value=4.4e+02 Score=23.41 Aligned_cols=69 Identities=22% Similarity=0.262 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCC-hhHHHHHHHHhHHHHHHHHHHHh----ccccchhHHHHHHHHHHHHHH
Q 017456 105 PVFFASAIIGILTGLDNYLYAYGVARLP-VSTSSLIIASQLAFTAAFAFLLV----KQKLTSYSLNAVFLLTLGAVV 176 (371)
Q Consensus 105 ~~~~~~~~~G~l~~~~n~Ly~~gl~ylp-vst~sli~ssql~Ftalfs~l~~----kek~t~~~i~~vvLl~~Ga~l 176 (371)
.-.++.-.+|..+...|.+-. ..+- ..+-.++.+.|.+..++.-.|=. ++++++.++.|+++..+|+.+
T Consensus 70 wW~~~GG~lGa~~vt~s~~l~---p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 70 WWAWIGGLLGAIFVTSSILLA---PRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred hHHHHccchhhhhhhhhHHhc---cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 444455567765555554432 2333 33457888899999999877755 499999999999999999433
No 148
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.29 E-value=1.2e+02 Score=31.73 Aligned_cols=30 Identities=3% Similarity=-0.144 Sum_probs=24.2
Q ss_pred CchhHHHHHHHHHHHHHHHHhccccchhhh
Q 017456 326 FQAEKGVSLALSLWGFASYFYGEIKNKKKM 355 (371)
Q Consensus 326 ~t~~k~ig~~Lvl~G~~~y~y~~~~~~~k~ 355 (371)
++.-|++++.+++.|+..+++.+..+++++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~~~~~~~ 283 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPKGREAPG 283 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 788999999999999988877776555543
Done!