BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017457
(371 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 200/362 (55%), Gaps = 5/362 (1%)
Query: 5 PGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXX 64
P KPL +A E+RIKIL T+LCH+D W S P+ P I
Sbjct: 17 PNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTW--SGKDPEGLFPCILGHEAAGIV 74
Query: 65 XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRE 123
D V+P + +C EC+ CKS K+N C K M D SRF
Sbjct: 75 ESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRF-S 133
Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
+ G I+HF+ S+F++Y+VV V KI P PL CLL CGV TG+GA W A VE
Sbjct: 134 VNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEP 193
Query: 184 GSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
GS VAIF + AS+IIG+DI+ +K+E KKFG+ +F+NP DK +
Sbjct: 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD-HDKPI 252
Query: 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK 303
+VI ++TDGG DY FECIG SVM A +GWG +VI+GV G IS +++
Sbjct: 253 QEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT 312
Query: 304 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRC 363
GR GT FGG K R+ + L +KY++KE+ + E+ITH ++ +INKAFDLL EG LRC
Sbjct: 313 GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRC 372
Query: 364 II 365
++
Sbjct: 373 VL 374
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 201/367 (54%), Gaps = 11/367 (2%)
Query: 5 PGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXX 64
P KPL +A E+R+K+L T+LCH+D W S P+ P +
Sbjct: 35 PNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTW--SGKDPEGLFPCVLGHEAAGIV 92
Query: 65 XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
D V+P + +C EC+ CKS K+N C K G G M D SR
Sbjct: 93 ESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGV---MMNDRKSR 149
Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
F + G I+HF+ S+F++Y+VV V KI P PL CLL CGV TG+GA W A
Sbjct: 150 F-SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAK 208
Query: 181 VEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
VE GS VA+F + AS+IIG+DI+ +KF+ K FG+T+FINP +
Sbjct: 209 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKE-HE 267
Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
+ + QVI ++TDGG DY FECIG SVM A +GWG +VI+GV G IS +
Sbjct: 268 QPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQ 327
Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
++ GR GT FGG K RS + +L KYL KE+ + E+ITH ++ DINKAFDL+ +G
Sbjct: 328 LVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGDC 387
Query: 361 LRCIIWM 367
LR ++ M
Sbjct: 388 LRVVLDM 394
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
GKPL KA E+RIKI+ T++CH+D + S D P+ PVI
Sbjct: 17 GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHEGAGIVE 74
Query: 66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
D V+P++ CGEC+ C + K+N C K G+G P DGTSRF
Sbjct: 75 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 130
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
KG I H++ S+F+EY+VV V KI P PL CLL CG+STG GAA A +
Sbjct: 131 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 189
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
E GS A+F ++ AS+IIGVDIN +KF K+FG T+ INP K
Sbjct: 190 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 248
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
+ +V+ EMTDGG DY FECIG VM A + +GWG +V++GV G I+ ++
Sbjct: 249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
+ GR+ GT FGG K + L +Y+ K++ + EF+TH +SF +INKAF+L+ GKS+
Sbjct: 309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368
Query: 362 RCII 365
R ++
Sbjct: 369 RTVV 372
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
GKPL KA E+RIKI+ T++CH+D + S D P+ PVI
Sbjct: 16 GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHEGAGIVE 73
Query: 66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
D V+P++ CGEC+ C + K+N C K G+G P DGTSRF
Sbjct: 74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 129
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
KG I H++ S+F+EY+VV V KI P PL CLL CG+STG GAA A +
Sbjct: 130 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 188
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
E GS A+F ++ AS+IIGVDIN +KF K+FG T+ INP K
Sbjct: 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 247
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
+ +V+ EMTDGG DY FECIG VM A + +GWG +V++GV G I+ ++
Sbjct: 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 307
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
+ GR+ GT FGG K + L +Y+ K++ + EF+TH +SF +INKAF+L+ GKS+
Sbjct: 308 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367
Query: 362 RCII 365
R ++
Sbjct: 368 RTVV 371
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
GKPL KA E+RIKI+ T++CH+D + S D P+ PVI
Sbjct: 17 GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHEGAGIVE 74
Query: 66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
D V+P++ CGEC+ C + K+N C K G+G P DGTSRF
Sbjct: 75 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 130
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
KG I H++ S+F+EY+VV V KI P PL CLL CG+STG GAA A +
Sbjct: 131 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 189
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
E GS A+F ++ AS+IIGVDIN +KF K+FG T+ INP K
Sbjct: 190 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 248
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
+ +V+ EMTDGG DY FECIG VM A + +GWG +V++GV G I+ ++
Sbjct: 249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
+ GR+ GT FGG K + L +Y+ K++ + EF+TH +SF +INKAF+L+ GKS+
Sbjct: 309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368
Query: 362 RCII 365
R ++
Sbjct: 369 RTVV 372
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
GKPL KA E+RIKI+ T++CH+D + S D P+ PVI
Sbjct: 16 GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHLGAGIVE 73
Query: 66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
D V+P++ CGEC+ C + K+N C K G+G P DGTSRF
Sbjct: 74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 129
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
KG I H++ S+F+EY+VV V KI P PL CLL CG+STG GAA A +
Sbjct: 130 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 188
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
E GS A+F ++ AS+IIGVDIN +KF K+FG T+ INP K
Sbjct: 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 247
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
+ +V+ EMTDGG DY FECIG VM A + +GWG +V++GV G I+ ++
Sbjct: 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 307
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
+ GR+ GT FGG K + L +Y+ K++ + EF+TH +SF +INKAF+L+ GKS+
Sbjct: 308 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367
Query: 362 RCII 365
R ++
Sbjct: 368 RTVV 371
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 190/360 (52%), Gaps = 7/360 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KPL A EIRIKI+ T +CH+D+ K PV+
Sbjct: 19 KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEGAGIVES 76
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
+ V+P+F CGECR C+S K+N C K P++ +RF KG
Sbjct: 77 VGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT-CKG 135
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
+ FL S+F++Y+VV+ V KI P PL CLL CGVSTG GAA A VE GST
Sbjct: 136 RKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGST 195
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F A +II VD+NP+KFE K FG TDF+NP + +SQV
Sbjct: 196 CAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPND-HSEPISQV 254
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG-VEMHGSPISLNSIEILKGR 305
+ +MT+GG D+ EC+G VM +A S +GWG +V++G ++H ++ I+++ GR
Sbjct: 255 LSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH--DVATRPIQLIAGR 312
Query: 306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
+ G+ FGG K + + + + YLDK++ L EFITH + +N A DL+ GK +R ++
Sbjct: 313 TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVL 372
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA+E+RIK++ +CH+D + PLPVI
Sbjct: 19 KPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK+ +SN C K G +DGT RF +G
Sbjct: 76 VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A VA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++II VDIN +KF K+ G T+ INP K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+KEMTDGG D+ FE IG M + E G +VI+GV +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G +GG K + I L ++ K+ +L ITH + F IN+ FDLL GKS+R ++
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 372
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA+E+RIK++ +C +D + PLPVI
Sbjct: 19 KPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK+ +SN C K G +DGT RF +G
Sbjct: 76 VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A VA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++II VDIN +KF K+ G T+ INP K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+KEMTDGG D+ FE IG M + E G +VI+GV +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G +GG K + I L ++ K+ +L ITH + F IN+ FDLL GKS+R ++
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 372
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 220 bits (561), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN ++F K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 220 bits (561), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA+E+RIK++ +C +D + PLPVI
Sbjct: 19 KPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK+ +SN C K G +DGT RF +G
Sbjct: 76 VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A VA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++II VDIN +KF K+ G T+ INP K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+KEMTDGG D+ FE IG M + E G +VI+GV +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G +GG K + I L ++ K+ +L ITH + F IN+ FDLL GKS+R ++
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 372
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK+ +SN C K G +DGT RF G
Sbjct: 76 VGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFT-CSG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHF+ +S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++II VDIN +KF K+ G T+ INP K + +V
Sbjct: 195 CAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+KEMTDGG D+ FE IG M + E G +VI+GV +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ +L IT+ + F IN+ FDLL GKS+R ++
Sbjct: 314 WKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSIRTVL 372
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P++ CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+ V +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P++ CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 179/355 (50%), Gaps = 5/355 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA+E+RIK++ +C +D + PLPVI
Sbjct: 19 KPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+CR CK+ +SN C K G +DGT RF +G
Sbjct: 76 VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A VA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++II VDIN +KF K+ G T+ INP K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+KEMTDGG D+ FE IG M + E G +VI+GV +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
G +GG K + I L ++ K+ +L ITH + F IN+ FDLL GKS+
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSI 368
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL---VAPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+C CK + N C K R M +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTM-QDGTSRFT-CRG 133
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 134 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGST 193
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 194 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 252
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 253 LTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 312
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL GKS+R I+
Sbjct: 313 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTIL 371
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ T +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+ CG+CR CK + N C K +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ +C SD + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL---VAPLPVIAGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+F CG+C CK + N C K R M +DGTSRF +G
Sbjct: 76 IGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTM-QDGTSRFT-CRG 133
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL S+F++Y+VVD V KI PL CL+ CG STG G+A KVA V GST
Sbjct: 134 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGST 193
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++IIGVDIN +KF K+ G T+ +NP K + +V
Sbjct: 194 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 252
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+ EM++GG D+ FE IG M A + +E +G +VI+GV +S+N + +L GR+
Sbjct: 253 LTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 312
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
G FGG K + + L ++ K+ L ITH + F IN+ FDLL GKS+R I+
Sbjct: 313 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTIL 371
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 181/364 (49%), Gaps = 8/364 (2%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
GKPL KA E+RI+I+ TSLCH+D T S L PVI
Sbjct: 20 GKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSK--FEGLAFPVIVGHEAAGIVE 77
Query: 66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP----NMPRDGTSRF 121
D V+P++ C +C+ C S +N C K P + D TSRF
Sbjct: 78 SIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRF 137
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
KG ++HF S+F++Y+VV ++ KI L CLL CG STG GAA A V
Sbjct: 138 T-CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKV 196
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
GST A+F + AS+IIG+DIN EKF K G TD +NP K
Sbjct: 197 TPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDL-HK 255
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
+ +VI E+T GG D+ +C G + M A + + GWG +GV +++ E+
Sbjct: 256 PIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEEL 315
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
+ GR++ GT+FGG K I L Y +K+ NL +TH + F I++AFDL+ +GKS+
Sbjct: 316 IIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLMNQGKSI 375
Query: 362 RCII 365
R I+
Sbjct: 376 RTIL 379
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 179/360 (49%), Gaps = 5/360 (1%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
KP KA E+RIK++ +C +D + PLPVI
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM---VTPLPVILGHEAAGIVES 75
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
D V+P+ CG+CR CK+ +SN C K +DGTSRF +
Sbjct: 76 VGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFT-CRR 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
IHHFL IS+F++Y+VVD V KI PL CL+ CG STG G+A VA V GST
Sbjct: 135 KPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
A+F + A++II VDIN +KF K+ G T+ INP K + +V
Sbjct: 195 CAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
+KEMTDGG D+ FE IG M + E G +VI+GV +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366
G GG K + + L ++ K+ +L ITH + F IN+ FDLL GKS+R I+
Sbjct: 314 WKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTILM 373
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 185/365 (50%), Gaps = 13/365 (3%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL-PVIFXXXXXXXX 64
G PL KA E+RI+++ T +CH+D+ ++TD K L PV+
Sbjct: 18 GSPLCIEEIEVSPPKACEVRIQVIATCVCHTDI----NATDPKKKALFPVVLGHECAGIV 73
Query: 65 XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR----DGTSR 120
D V+P F C C+ C S +N C K P + + D TSR
Sbjct: 74 ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133
Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
F KG I+HF+ +SSF++Y+VV ++ ++ L CL+ CG S+G GAA A
Sbjct: 134 FT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAK 192
Query: 181 VEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
V GST A+F ++ AS+II +DIN EKF K G TD +NP D
Sbjct: 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL-D 251
Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
K V VI E+T GG DY +C G + A + + GWG ++G ++ +++ +++
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD--EMTIPTVD 309
Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
++ GRS+ GT+FGG K + L Y +K+ +L +TH + F IN A DL+ EGKS
Sbjct: 310 VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS 369
Query: 361 LRCII 365
+R I+
Sbjct: 370 IRTIL 374
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 184/365 (50%), Gaps = 13/365 (3%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL-PVIFXXXXXXXX 64
G PL KA E+RI+++ T +C +D+ ++TD K L PV+
Sbjct: 18 GSPLCIEEIEVSPPKACEVRIQVIATCVCPTDI----NATDPKKKALFPVVLGHECAGIV 73
Query: 65 XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR----DGTSR 120
D V+P F C C+ C S +N C K P + + D TSR
Sbjct: 74 ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133
Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
F KG I+HF+ +SSF++Y+VV ++ ++ L CL+ CG S+G GAA A
Sbjct: 134 FT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAK 192
Query: 181 VEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
V GST A+F ++ AS+II +DIN EKF K G TD +NP D
Sbjct: 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL-D 251
Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
K V VI E+T GG DY +C G + A + + GWG ++G ++ +++ +++
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD--EMTIPTVD 309
Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
++ GRS+ GT+FGG K + L Y +K+ +L +TH + F IN A DL+ EGKS
Sbjct: 310 VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS 369
Query: 361 LRCII 365
+R I+
Sbjct: 370 IRTIL 374
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 178/349 (51%), Gaps = 12/349 (3%)
Query: 20 KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDL 79
K E+RIKIL T +C +D K T + K P VI D
Sbjct: 32 KTKEVRIKILATGICRTDDHVIKG-TMVSKFP--VIVGHEATGIVESIGEGVTTVKPGDK 88
Query: 80 VLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNIS 136
V+P+F C EC C++ N C + GRG DGT+RF KG +HHFLN S
Sbjct: 89 VIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL----ADGTTRFT-CKGKPVHHFLNTS 143
Query: 137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXX 196
+FTEY+VVD + V KI P CL+ CG STG GAA K V+ GST +F
Sbjct: 144 TFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVG 203
Query: 197 XXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD 256
+ AS+IIG+D+N +KFE G T+ I+P K +S+V+ EMT
Sbjct: 204 LSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVG 262
Query: 257 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 316
Y FE IG M DA S +G +V++GV ++ + + + GR+ G FGGLK
Sbjct: 263 YTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK 322
Query: 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
R D+ L ++L K+ +L + ITH + F I++ F+LL G+S+R ++
Sbjct: 323 SRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVL 371
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/361 (36%), Positives = 186/361 (51%), Gaps = 7/361 (1%)
Query: 5 PGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXX 64
P KPL KA E+RIKIL + +C SD + K ++ PVI
Sbjct: 18 PHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK---EIIPSKFPVILGHEAVGVV 74
Query: 65 XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
D V+P+F CG CR CKSS SN C K G + + D TSRF
Sbjct: 75 ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-C 133
Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
+G I++ + S+FTEY+VV V KI P PL +CL+ CG +TG GAA A V G
Sbjct: 134 RGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPG 192
Query: 185 STVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
ST A+F + AS+IIGV + +KF + G T+ +NP DK +
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKPIY 251
Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
+VI E T+GG DY EC G M +A S+ G G TV+LG+ + L+ + +L G
Sbjct: 252 EVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG 311
Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
RS+ G+ FGG K +++ L Y+ K++N+ ++ +++ INKAF+LL G+ +R I
Sbjct: 312 RSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 370
Query: 365 I 365
+
Sbjct: 371 M 371
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 178/349 (51%), Gaps = 12/349 (3%)
Query: 20 KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDL 79
K E+RIKIL T +C +D K T + K P VI D
Sbjct: 32 KTKEVRIKILATGICRTDDHVIKG-TMVSKFP--VIVGHEATGIVESIGEGVTTVKPGDK 88
Query: 80 VLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNIS 136
V+P+F C EC C++ N C + GRG DGT+RF KG +HHF+N S
Sbjct: 89 VIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL----ADGTTRFT-CKGKPVHHFMNTS 143
Query: 137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXX 196
+FTEY+VVD + V KI P CL+ CG STG GAA K V+ GST +F
Sbjct: 144 TFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVG 203
Query: 197 XXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD 256
+ AS+IIG+D+N +KFE G T+ I+P K +S+V+ EMT
Sbjct: 204 LSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVG 262
Query: 257 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 316
Y FE IG M DA S +G +V++GV ++ + + + GR+ G FGGLK
Sbjct: 263 YTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK 322
Query: 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
R D+ L ++L K+ +L + ITH + F I++ F+LL G+S+R ++
Sbjct: 323 SRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVL 371
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 145/345 (42%), Gaps = 11/345 (3%)
Query: 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
E+ +K++ T +CH+D+ +PLP + D V+
Sbjct: 33 EVLVKVVATGMCHTDLIVRDQKY---PVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV- 88
Query: 83 IFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
+ + CG+C C + CS+F GR + + +G V HF SSF Y
Sbjct: 89 LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATY 148
Query: 142 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXX 201
++ + VK+T +P+ + L CG+ TG GA V S+ +
Sbjct: 149 ALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALL 208
Query: 202 XXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261
++ AS II VDI + E+ K+ G T IN T + IKE+TDGG ++ E
Sbjct: 209 AAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT---QDPVAAIKEITDGGVNFALES 265
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSD 320
G ++ ++ GK ++G G+ + + +L G+++ G G P+
Sbjct: 266 TGSPEILKQGVDALGI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKF 324
Query: 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
I L + Y + + + +F +IN+A +G +L+ II
Sbjct: 325 IPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPII 368
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 139/355 (39%), Gaps = 34/355 (9%)
Query: 24 IRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLV--- 80
I ++IL +C SDV ++ P++PLP+I L
Sbjct: 45 ILVEILSAGVCGSDVHMFRGED--PRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGD 102
Query: 81 LPIFHR--DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
L +++R CGEC CK SK + Y N G S + L+G +
Sbjct: 103 LIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINR---GCSEYPHLRG----------CY 149
Query: 139 TEYSVVDI-THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXX 197
+ + V+D T V+K++ L + + C +T A + G TV I
Sbjct: 150 SSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGL 209
Query: 198 XXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GAD 256
R A +I + +P + ++ ++ G +N + + I ++T G GAD
Sbjct: 210 FGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGAD 269
Query: 257 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFGG 314
+ E G + + + R G G + GV + P+ E +LK + G +
Sbjct: 270 FILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV-- 326
Query: 315 LKPRSDIATLAQKYLDKELN---LGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366
SD + + N L + ITH + + NKA +L+ ++L+ I++
Sbjct: 327 ----SDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREALKVILY 377
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 125/341 (36%), Gaps = 44/341 (12%)
Query: 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFXXXXXXXXXXXXXXXXXXXXRDLV- 80
E+ ++I +CH+D + D P P LP+I D V
Sbjct: 27 EVLVRIKACGVCHTD--LHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVG 84
Query: 81 LPIFHRDCGECRDCKSSKSNTCS-KFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 139
+P + CG C C S + C + GY + +
Sbjct: 85 IPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-----------------------GGYA 121
Query: 140 EYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
EY +VVKI ++ A + C GV+T A KV G + G VAI+
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KALKVTGAKPGEWVAIYGIGGLGHV 179
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 258
+ ++ VDI EK E+ K+ G +NP + ++ +KE GG
Sbjct: 180 AVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLK---EDAAKFMKEKV-GGVHAA 234
Query: 259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 318
A+NS R G G V++G+ PI + +L G + G+ G R
Sbjct: 235 VVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFDT-VLNGIKIIGSIVG---TR 289
Query: 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
D+ Q + ++ I IN+ FD +L+G+
Sbjct: 290 KDLQEALQFAAEGKVKT---IIEVQPLEKINEVFDRMLKGQ 327
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 125/341 (36%), Gaps = 44/341 (12%)
Query: 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFXXXXXXXXXXXXXXXXXXXXRDLV- 80
E+ ++I +CH+D + D P P LP+I D V
Sbjct: 27 EVLVRIKACGVCHTD--LHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVG 84
Query: 81 LPIFHRDCGECRDCKSSKSNTCS-KFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 139
+P + CG C C S + C + GY + +
Sbjct: 85 IPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-----------------------GGYA 121
Query: 140 EYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
EY +VVKI ++ A + C GV+T A KV G + G VAI+
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KALKVTGAKPGEWVAIYGIGGFGHV 179
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 258
+ ++ VDI EK E+ K+ G +NP + ++ +KE GG
Sbjct: 180 AVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLK---EDAAKFMKEKV-GGVHAA 234
Query: 259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 318
A+NS R G G V++G+ PI + +L G + G+ G R
Sbjct: 235 VVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFDT-VLNGIKIIGSIVG---TR 289
Query: 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
D+ Q + ++ I IN+ FD +L+G+
Sbjct: 290 KDLQEALQFAAEGKVKT---IIEVQPLEKINEVFDRMLKGQ 327
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
+F +K V F +++ + +++ H+ K IPL A ++ ++TG A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
+E+GS+V + +L A +IIGV P E K +G TD +N
Sbjct: 163 DIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN-- 220
Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
V QV+K G D G + ++ A + G +I + HGS +L
Sbjct: 221 GHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDALLIP 277
Query: 300 EILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAF 352
+ G CG T GGL P R + L K ++ + +TH F +I KAF
Sbjct: 278 RVEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAF 334
Query: 353 DLL 355
L+
Sbjct: 335 MLM 337
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
+F +K V F +++ + +++ H+ K IPL A ++ ++TG A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
+++GS+V + +L A +IIGV P E K +G TD +N
Sbjct: 163 DIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN-- 220
Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
V QV+K G D G + ++ A + + G +I + HGS +L
Sbjct: 221 GHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIP 277
Query: 300 EILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAF 352
+ G CG T GGL P R + L K ++ + +TH F +I KAF
Sbjct: 278 RVEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAF 334
Query: 353 DLL 355
L+
Sbjct: 335 MLM 337
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 130/373 (34%), Gaps = 66/373 (17%)
Query: 3 RIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFXXXXX 61
R GKPL +I++ I + +CH+D + D P P P I
Sbjct: 32 RAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTD--LHAAEGDWPVKPNPPFIPGHEGV 89
Query: 62 XXXXXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTS 119
D V +P + CG CR C C + GY N
Sbjct: 90 GFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVN------- 142
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG-IACLLSCGVSTGVGAAWKV 178
F EY V D V + +I IA +L GV+ V KV
Sbjct: 143 ----------------GGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT--VYKGLKV 184
Query: 179 AGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
+ G V I R + VDI+ K ++ ++ G T +N T
Sbjct: 185 TDTKPGDWVVISGIGGLGHMAVQYARA-MGLNVAAVDIDDRKLDLARRLGATVTVNAKTV 243
Query: 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
D + I++ TDGGA + + +T+V AF + LG+ G +SLN
Sbjct: 244 ADP--AAYIRKETDGGA----QGVLVTAVSPKAFEQA---------LGMVARGGTVSLNG 288
Query: 299 IE-----------ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVS-FH 346
+ +L G +V G+ G R D+ Q+ LD + T +
Sbjct: 289 LPPGDFPLSIFNMVLNGVTVRGSIVG---TRLDL----QESLDFAADGKVKATIQTGKLE 341
Query: 347 DINKAFDLLLEGK 359
DIN FD + +G
Sbjct: 342 DINAIFDDMRQGN 354
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 130/351 (37%), Gaps = 40/351 (11%)
Query: 23 EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
E+ IK+L TS+C +D+ ++ + ++ P I D V
Sbjct: 30 EVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVS 89
Query: 82 PIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
H CG+C C+ + + C FG + DG F
Sbjct: 90 VETHIVCGKCYACRRGQYHVCQNTKIFG------VDTDGV-------------------F 124
Query: 139 TEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
EY+VV ++ K IP A L G +AG G +V I
Sbjct: 125 AEYAVVPAQNIWKNPKSIPPEYATLQE---PLGNAVDTVLAGPISGKSVLITGAGPLGLL 181
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY 257
+ + A +I + + + E+ KK G INP ++ V + + ++TDG G D
Sbjct: 182 GIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPF---EEDVVKEVXDITDGNGVDV 238
Query: 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP 317
E G + + G+ +LG+ I N++ I K ++ G G
Sbjct: 239 FLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKVTIDFNNLIIFKALTIYG--ITGRHL 295
Query: 318 RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLLLEGKSLRCIIWM 367
T+++ +LNL ITH+ F +AF+L GK+ + + +
Sbjct: 296 WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 346
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 130/351 (37%), Gaps = 40/351 (11%)
Query: 23 EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
E+ IK+L TS+C +D+ ++ + ++ P I D V
Sbjct: 31 EVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVS 90
Query: 82 PIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
H CG+C C+ + + C FG + DG F
Sbjct: 91 VETHIVCGKCYACRRGQYHVCQNTKIFG------VDTDGV-------------------F 125
Query: 139 TEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
EY+VV ++ K IP A L G +AG G +V I
Sbjct: 126 AEYAVVPAQNIWKNPKSIPPEYATLQE---PLGNAVDTVLAGPISGKSVLITGAGPLGLL 182
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY 257
+ + A +I + + + E+ KK G INP ++ V + + ++TDG G D
Sbjct: 183 GIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPF---EEDVVKEVXDITDGNGVDV 239
Query: 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP 317
E G + + G+ +LG+ I N++ I K ++ G G
Sbjct: 240 FLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKVTIDFNNLIIFKALTIYG--ITGRHL 296
Query: 318 RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLLLEGKSLRCIIWM 367
T+++ +LNL ITH+ F +AF+L GK+ + + +
Sbjct: 297 WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 347
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
+F +K V F +++ + +++ H+ K IPL A ++ ++TG A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
+E+G+TVA+ +L A +II V P + K +G TD +N
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YK 219
Query: 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
D + I +T+G G D G +M A + G I V G L+
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG---GTIANVNYFGEGEVLDV 276
Query: 299 IEILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKA 351
+ G CG T GGL P R + L K ++ + +TH F +I KA
Sbjct: 277 PRLEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 352 FDLL 355
F L+
Sbjct: 334 FMLM 337
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 25/244 (10%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
+F +K V F +++ + +++ H+ K IPL A ++ ++TG A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
+E+G+TVA+ +L A +II V P + K +G TD +N
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YK 219
Query: 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
D + I +T+G G D G +M A + G I V G L
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG---GTIANVNYFGEGEVLPV 276
Query: 299 IEILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKA 351
+ G CG T GGL P R + L K ++ + +TH F +I KA
Sbjct: 277 PRLEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 352 FDLL 355
F L+
Sbjct: 334 FMLM 337
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 89/252 (35%), Gaps = 25/252 (9%)
Query: 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
EI +K+ LCHSD+ LP+ D V
Sbjct: 27 EILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAV 86
Query: 83 IFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
CG C C + N C++ G P P G+ S EY
Sbjct: 87 YGPWGCGACHACARGRENYCTRAADLGITP--PGLGSP----------------GSMAEY 128
Query: 142 SVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXX 200
+VD H+V I P+ A L G++ + + + GST +
Sbjct: 129 MIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGI 188
Query: 201 XXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF 259
R A+++I VD++ ++ + ++ G + A + I+E+T G GA F
Sbjct: 189 QILRAVSAARVIAVDLDDDRLALAREVG----ADAAVKSGAGAADAIRELTGGQGATAVF 244
Query: 260 ECIGLTSVMNDA 271
+ +G S ++ A
Sbjct: 245 DFVGAQSTIDTA 256
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 18/227 (7%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
F EY V D + I P +PL A +++ ++TG A ++A +++GS+V +
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 255
+L A +IIGV P E K +G TD +N V QV+K G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIVDQVMKLTNGKGV 236
Query: 256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG----TY 311
D G + ++ A + + G +I + HGS +L + G CG T
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWG---CGMAHKTI 290
Query: 312 FGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLL 355
GGL P R L + ++L + +TH F I +A L+
Sbjct: 291 KGGLCPGGRLRAEMLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLM 337
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 18/227 (7%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
F EY V D + I P +PL A +++ ++TG A ++A +++GS+V +
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 255
+L A +IIGV P E K +G TD +N V QV+K G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIVDQVMKLTNGKGV 236
Query: 256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG----TY 311
D G + ++ A + + G +I + HGS +L + G CG T
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWG---CGMAHKTI 290
Query: 312 FGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLL 355
GGL P R L + ++L + +TH F I +A L+
Sbjct: 291 KGGLCPGGRLRAEMLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLM 337
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 37/221 (16%)
Query: 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 147
CG C C++ + N C R L+ IH F EY +V
Sbjct: 111 CGRCPQCQAGRVNLC-------------------RNLRAIGIHRD---GGFAEYVLVPRK 148
Query: 148 HVVKITPHI-PL-GIAC-LLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXR 204
+I + P+ G C L+C + ++G++ GSTVAI R
Sbjct: 149 QAFEIPLTLDPVHGAFCEPLACCLH-----GVDLSGIKAGSTVAILGGGVIGLLTVQLAR 203
Query: 205 LNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIK---EMTDGGADYCFEC 261
L A+ +I K + ++ G T ++P + GD V + I + GG D EC
Sbjct: 204 LAGATTVILSTRQATKRRLAEEVGATATVDP-SAGD--VVEAIAGPVGLVPGGVDVVIEC 260
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL 302
G+ + + ++ G G VILGV G + + +IL
Sbjct: 261 AGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDIL 300
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
F EY V D + I P +PL A +++ ++TG A ++A +E+GS+V +
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 255
+L A +IIGV P E K +G TD +N QV+K G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIEDQVMKLTNGKGV 236
Query: 256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG----TY 311
D G + ++ A + G +I + HGS +L + G CG T
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDALLIPRVEWG---CGMAHKTI 290
Query: 312 FGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLL 355
GGL P R L + ++L + +TH F I +A L+
Sbjct: 291 KGGLCPGGRLRAERLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLM 337
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 130/363 (35%), Gaps = 54/363 (14%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFXXXXXXXX 64
G PL ++ +KI + +CH+D + D P K PLP I
Sbjct: 16 GAPLRIEEVKVPLPGPGQVLVKIEASGVCHTD--LHAAEGDWPVKPPLPFIPGHEGVGYV 73
Query: 65 XXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTSRFR 122
D V +P + CG C C + C S+ GY N
Sbjct: 74 AAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVN---------- 123
Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG-IACLLSCGVSTGVGAAWKVAGV 181
+ EY + D +V + ++ IA +L GV+ G K
Sbjct: 124 -------------GGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKG--LKQTNA 168
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
G VAI R + +DI+ K E+ +K G + +N +
Sbjct: 169 RPGQWVAISGIGGLGHVAVQYAR-AMGLHVAAIDIDDAKLELARKLGASLTVNARQ--ED 225
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNS----SREGWGKTVILGVEMHGSPISLN 297
V + +++ GGA +T+V N AF +R G G ++G+ P +
Sbjct: 226 PVEAIQRDI--GGAHGVL----VTAVSNSAFGQAIGMARRG-GTIALVGLPPGDFPTPIF 278
Query: 298 SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD-KELNLGEFITHEVSFHDINKAFDLLL 356
+ +LKG + G+ G R+D+ Q+ LD L + H DIN+ D +
Sbjct: 279 DV-VLKGLHIAGSIVG---TRADL----QEALDFAGEGLVKATIHPGKLDDINQILDQMR 330
Query: 357 EGK 359
G+
Sbjct: 331 AGQ 333
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 128/353 (36%), Gaps = 40/353 (11%)
Query: 23 EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
E+ IK+L TS+C +D+ ++ + ++ P I D +
Sbjct: 31 EVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGDYIS 90
Query: 82 PIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
H CG+C CK ++ + C FG + DG F
Sbjct: 91 VETHIVCGKCYACKHNRYHVCQNTKIFG------VDMDGV-------------------F 125
Query: 139 TEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
Y++V + K +P A L G +AG G + I
Sbjct: 126 AHYAIVPAKNAWKNPKDMPPEYAALQE---PLGNAVDTVLAGPIAGRSTLITGAGPLGLL 182
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY 257
+ + A +I + + + ++ KK G +NP ++ + + ++TDG G +
Sbjct: 183 GIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPF---EEDPVKFVMDITDGAGVEV 239
Query: 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP 317
E G + + G G+ +LG+ I N++ I K V G G
Sbjct: 240 FLEFSGAPKALEQGLKAVTPG-GRVSLLGLFPREVTIDFNNLIIFKALEVHG--ITGRHL 296
Query: 318 RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLLLEGKSLRCIIWMDK 369
T++ +LNL ITH+ F +AF+L+ GK+ + + + K
Sbjct: 297 WETWYTVSSLIQSGKLNLDPIITHKYKGFDKFEEAFELMRAGKTGKVVFFPHK 349
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/344 (18%), Positives = 119/344 (34%), Gaps = 32/344 (9%)
Query: 23 EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
EI +++ S+C +D+ WK + ++ P++ D V
Sbjct: 27 EILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVS 86
Query: 82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
H C C C++ + C + RDG F EY
Sbjct: 87 LESHIVCHACPACRTGNYHVCLNT---QILGVDRDG-------------------GFAEY 124
Query: 142 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXX 201
VV + +P +A +L V + +GV G +V I
Sbjct: 125 VVVPAENAWVNPKDLPFEVAAILEP-FGNAVHTVYAGSGVS-GKSVLITGAGPIGLMAAM 182
Query: 202 XXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261
R + A I+ D NP + + + +NP ++ + +V++ +T G + E
Sbjct: 183 VVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPL---EEDLLEVVRRVTGSGVEVLLEF 238
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI 321
G + ++ + G G+ ILG+ PI + L R + G +
Sbjct: 239 SGNEAAIHQGLMALIPG-GEARILGIP--SDPIRFDLAGELVMRGITAFGIAGRRLWQTW 295
Query: 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
++L +TH + +AF LL G++++ I+
Sbjct: 296 MQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
F EY V D + I P +PL A +++ ++TG A ++A +E+G+TVA+
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIELGATVAVLGIGPV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-G 254
+L A +II V P + K +G TD +N D + I +T+G G
Sbjct: 179 GLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YKDGPIESQIMNLTEGKG 235
Query: 255 ADYCFECIGLTSVMNDAFNSSREG 278
D G +M A + G
Sbjct: 236 VDAAIIAGGNADIMATAVKIVKPG 259
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 110/290 (37%), Gaps = 38/290 (13%)
Query: 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 143
F CG C C S C RE+K + E ++
Sbjct: 87 FFEGCGHCEYCVSGNETFC-------------------REVKN---AGYSVDGGMAEEAI 124
Query: 144 VDITHVVKITPHI-PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXX 202
V + VK+ + P+ + + GV+T A KV+GV+ G IF
Sbjct: 125 VVADYAVKVPDGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLGNLAIQY 182
Query: 203 XRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 261
+ +K+I VDIN +K + KK G IN GD IK++T G G C
Sbjct: 183 AKNVFGAKVIAVDINQDKLNLAKKIGADVTINS---GDVNPVDEIKKITGGLGVQSAIVC 239
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI 321
+ + + +S + GK V + V +S+ ++ + G V G+ G R D+
Sbjct: 240 -AVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTV-VFDGVEVAGSLVG---TRLDL 294
Query: 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-SLRCIIWMDKL 370
A Q + ++ + I +IN D + GK R +I KL
Sbjct: 295 AEAFQFGAEGKV---KPIVATRKLEEINDIIDEMKAGKIEGRMVIDFTKL 341
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 110/290 (37%), Gaps = 38/290 (13%)
Query: 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 143
F CG C C S C RE+K + E ++
Sbjct: 87 FFEGCGHCEYCVSGNETFC-------------------REVKN---AGYSVDGGMAEEAI 124
Query: 144 VDITHVVKITPHI-PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXX 202
V + VK+ + P+ + + GV+T A KV+GV+ G IF
Sbjct: 125 VVADYAVKVPDGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLGNLAIQY 182
Query: 203 XRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 261
+ +K+I VDIN +K + KK G IN GD IK++T G G C
Sbjct: 183 AKNVFGAKVIAVDINQDKLNLAKKIGADVIINS---GDVNPVDEIKKITGGLGVQSAIVC 239
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI 321
+ + + +S + GK V + + +S+ ++ + G V G+ G R D+
Sbjct: 240 -AVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTV-VFDGVEVAGSLVG---TRLDL 294
Query: 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-SLRCIIWMDKL 370
A Q + ++ + I +IN D + GK R +I KL
Sbjct: 295 AEAFQFGAEGKV---KPIVATRKLEEINDIIDEMKAGKIEGRMVIDFTKL 341
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 132/367 (35%), Gaps = 59/367 (16%)
Query: 7 KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
+PL + E+ I+I +C +D+ WK LP+I
Sbjct: 14 EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVE 73
Query: 67 XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
++V+ D CR C+ K N C K
Sbjct: 74 VGELAKVKKGDNVVVYATWGDL-TCRYCREGKFNIC----------------------KN 110
Query: 127 DVIHHFLNISSFTEYSVVDITH-VVKITPHIPLGIACLLSCGVSTGVGA----------- 174
+I F+EY +V + +VK+ P+ A L G +T +GA
Sbjct: 111 QIIPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTSMGAIRQALPFISKF 169
Query: 175 AWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFIN 234
A V V +A++ L + I+G+ + + + + G D+++
Sbjct: 170 AEPVVIVNGIGGLAVYTIQILKA-------LMKNITIVGISRSKKHRDFALELG-ADYVS 221
Query: 235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 293
K +I ++TDG GA + +G +N + + I+ V M G
Sbjct: 222 EM----KDAESLINKLTDGLGASIAIDLVGTEET---TYNLGKLLAQEGAIILVGMEGKR 274
Query: 294 ISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 352
+SL + + + + + G+ +G L D+ L++ K + +V DINKAF
Sbjct: 275 VSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYII------KVPLDDINKAF 328
Query: 353 DLLLEGK 359
L EG+
Sbjct: 329 TNLDEGR 335
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Query: 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
E+R+++ +L H DV K PKLPLP + D V+
Sbjct: 29 EVRVRLKAAALNHLDVWVRKGVAS-PKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVI 87
Query: 83 IFHRDCGECRDCKSSKSNTCSKF 105
CG C C + + N C ++
Sbjct: 88 NPGLSCGRCERCLAGEDNLCPRY 110
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 126/380 (33%), Gaps = 82/380 (21%)
Query: 3 RIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFXXXXX 61
R G PL ++++KI + +CH+D+ + D P P LP I
Sbjct: 9 RAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLH--AADGDWPVKPTLPFIPGHEGV 66
Query: 62 XXXXXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGTS 119
D V +P + CG C C C K GY N
Sbjct: 67 GYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVN------- 119
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP-LGIACLLSCGVSTGVGAAWKV 178
+ EY V D +V + + + IA +L GV+ V KV
Sbjct: 120 ----------------GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVT--VYKGLKV 161
Query: 179 AGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
G V I R ++ VDI+ K + ++ G +N
Sbjct: 162 TDTRPGQWVVISGIGGLGHVAVQYARA-MGLRVAAVDIDDAKLNLARRLGAEVAVNARDT 220
Query: 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
Q KE+ GGA +T+V AF+ + +G+ G I+LN
Sbjct: 221 DPAAWLQ--KEI--GGAHGVL----VTAVSPKAFSQA---------IGMVRRGGTIALNG 263
Query: 299 IE-----------ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITH------ 341
+ +LKG ++ G+ G RSD+ Q+ LD F H
Sbjct: 264 LPPGDFGTPIFDVVLKGITIRGSIVG---TRSDL----QESLD-------FAAHGDVKAT 309
Query: 342 --EVSFHDINKAFDLLLEGK 359
D+N F L EGK
Sbjct: 310 VSTAKLDDVNDVFGRLREGK 329
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 98/270 (36%), Gaps = 36/270 (13%)
Query: 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGT-SRFRELKGDVIHHFLNISSFTEYSVVDI 146
C C+ CK K N C P P DG +R+ D H + S E ++++
Sbjct: 96 CRRCQFCKEGKYNLCPDLTFCATP--PDDGNLARYYVHAADFCHKLPDNVSLEEGALLE- 152
Query: 147 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLN 206
PL S GV A + AGV++G+TV + +
Sbjct: 153 ----------PL----------SVGVHACRR-AGVQLGTTVLVIGAGPIGLVSVLAAKAY 191
Query: 207 RASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 264
A ++ +P + E+ K G +T ++PA + ++ + I+ + +C G
Sbjct: 192 GAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGN 250
Query: 265 TSVMNDAFNSSREGWGKTVI-LGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIAT 323
+ N +R G ++ +G +M P+ + +SV + +D
Sbjct: 251 EKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSV-------FRYCNDYPI 303
Query: 324 LAQKYLDKELNLGEFITHEVSFHDINKAFD 353
+ N+ + +TH AF+
Sbjct: 304 ALEMVASGRCNVKQLVTHSFKLEQTVDAFE 333
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 175 AWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFIN 234
A + AGV +G+ V + + A++++ D++ + K+ G +
Sbjct: 162 ACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILE 221
Query: 235 PATCGDKTVSQVIKEMTDGGADYCFECIGL-TSVMNDAFNSSREGWGKTVILGVEMHGSP 293
+ + +++ ++ + + EC G+ TS+ + + G V LG EM P
Sbjct: 222 ISNESPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVP 281
Query: 294 I---SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 350
+ + ++I C T+ P + I+ LA K +N+ +TH +
Sbjct: 282 LVHAATREVDIKGVFRYCNTW-----PMA-ISMLA----SKSVNVKPLVTHRFPLEKALE 331
Query: 351 AFDLLLEGKSLRCIIWMD 368
AF+ +G L+ +I D
Sbjct: 332 AFETSKKGLGLKVMIKCD 349
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
+I+I+ + +C +D L LP F DLV+P
Sbjct: 28 KIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEESYHGFSQGDLVMP 87
Query: 83 IFHRDCGECRDCKSSKSNTCS--KFGRG 108
+ R CG CR+C + + C +FG
Sbjct: 88 VNRRGCGICRNCLVGRPDFCETGEFGEA 115
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
+I+I+ + +C +D L LP F DLV+P
Sbjct: 28 KIKIRTIYNGICGTDREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEESYHGFSQGDLVMP 87
Query: 83 IFHRDCGECRDCKSSKSNTCS--KFGRG 108
+ R CG CR+C + + C +FG
Sbjct: 88 VNRRGCGICRNCLVGRPDFCETGEFGEA 115
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 26 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFH 85
+K++ T++C SD ++ +PK + DLV F+
Sbjct: 37 LKVVSTNICGSDQHIYRGRFIVPK---GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFN 93
Query: 86 RDCGECRDCKSSKSNTCSK 104
CG CR+CK ++S+ C
Sbjct: 94 VACGRCRNCKEARSDVCEN 112
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 125/366 (34%), Gaps = 57/366 (15%)
Query: 6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSS-------TDLPKLPLPVIFXX 58
GKPL K ++ IKI +CHSDV + DL + LPV
Sbjct: 10 GKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL-GVKLPVTLGH 68
Query: 59 XXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPR 115
DLV G C C+ + + C G Y
Sbjct: 69 EIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINY------ 122
Query: 116 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 175
DG L + H+ + S V+ A L+C T A
Sbjct: 123 DGAYAEYVL----VPHYKYLYKLRRLSAVE---------------AAPLTCSGVTTYRAV 163
Query: 176 WKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
K + + V I + + IIGVD+ E E K+ G D++
Sbjct: 164 RKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAG-ADYVIN 222
Query: 236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG-----VEM 289
A+ D VS+ I+ +T G GAD + ++ + GK V++G ++
Sbjct: 223 ASSQD-PVSE-IRRITQGKGADAVIDLNNSEKTLS-IYPYVLAKQGKYVMVGLFGADLKY 279
Query: 290 HGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDIN 349
H I+LN ++ + G+ G I +LA+ K + +T + + N
Sbjct: 280 HAPLITLNEVQFI------GSLVGNQSDFLGIMSLAEAGKVKPM-----VTKTMKLEEAN 328
Query: 350 KAFDLL 355
+A D L
Sbjct: 329 EAIDNL 334
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 117/335 (34%), Gaps = 38/335 (11%)
Query: 23 EIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
E+R+KI + LC SD+ +K+ P+ D V
Sbjct: 27 EVRVKIASSGLCGSDLPRIFKNGAHY----YPITLGHEFSGYIDAVGSGVDDLHPGDAVA 82
Query: 82 PIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTE 140
+ C C +C + C+K+ G R RDG F E
Sbjct: 83 CVPLLPCFTCPECLKGFYSQCAKYDFIGSR----RDG-------------------GFAE 119
Query: 141 YSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXX 200
Y VV +V + +P+ + ++ G+ A G E + + I
Sbjct: 120 YIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQ 178
Query: 201 XXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260
L A + +DI+ EK + K FG N + + V++E+ E
Sbjct: 179 CAVALG-AKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFN--QLILE 235
Query: 261 CIGLTSVMNDAFNSSREGWGKTVI--LGVEMHGSPISLNSIEILKGRSVCGTY--FGGLK 316
G+ + A + ++ L ++H + + I + K +V G++ +
Sbjct: 236 TAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI-LRKELTVIGSWMNYSSPW 294
Query: 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKA 351
P + T ++ +++L+L I H SF +A
Sbjct: 295 PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQA 329
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/198 (17%), Positives = 77/198 (38%), Gaps = 14/198 (7%)
Query: 175 AWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFIN 234
A + GV +G V + + A++++ D++ + K+ G +
Sbjct: 163 ACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ 222
Query: 235 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI-LGVEMHGSP 293
+ + +++ ++ + EC G + + ++R G ++ LG EM P
Sbjct: 223 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVP 282
Query: 294 I---SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 350
+ ++ ++I C T+ I+ LA K +N+ +TH +
Sbjct: 283 LLHAAIREVDIKGVFRYCNTW------PVAISMLA----SKSVNVKPLVTHRFPLEKALE 332
Query: 351 AFDLLLEGKSLRCIIWMD 368
AF+ +G L+ ++ D
Sbjct: 333 AFETFKKGLGLKIMLKCD 350
>pdb|2XLQ|A Chain A, Structural And Mechanistic Analysis Of The Magnesium-
Independent Aromatic Prenyltransferase Cloq From The
Clorobiocin Biosynthetic Pathway
pdb|2XLY|A Chain A, Structural And Mechanistic Analysis Of The Magnesium-
Independent Aromatic Prenyltransferase Cloq From The
Clorobiocin Biosynthetic Pathway
Length = 327
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 291 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 340
G+P+ + +G + YFGGL+P DI T+ + L +F+
Sbjct: 107 GAPVQSGDFDAGRGMAKTWLYFGGLRPAEDILTVPALPASVQARLKDFLA 156
>pdb|2XM7|A Chain A, Structural And Mechanistic Analysis Of The Magnesium-
Independent Aromatic Prenyltransferase Cloq From The
Clorobiocin Biosynthetic Pathway
Length = 327
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 291 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 340
G+P+ + +G + YFGGL+P DI T+ + L +F+
Sbjct: 107 GAPVQSGDFDAGRGMAKTWLYFGGLRPAEDILTVPALPASVQARLKDFLA 156
>pdb|2XM5|A Chain A, Structural And Mechanistic Analysis Of The Magnesium-
Independent Aromatic Prenyltransferase Cloq From The
Clorobiocin Biosynthetic Pathway
Length = 327
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 291 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 340
G+P+ + +G + YFGGL+P DI T+ + L +F+
Sbjct: 107 GAPVQSGDFDAGRGMAKTWLYFGGLRPAEDILTVPALPASVQARLKDFLA 156
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Query: 21 AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLV 80
A E+R+K+ +C SD ++ K P + R V
Sbjct: 44 AGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAV 103
Query: 81 LPIFHRDCGECRDCKSSKSNTCSKFG 106
P+ CG C C K N C+
Sbjct: 104 DPVV--SCGHCYPCSIGKPNVCTTLA 127
>pdb|2LPM|A Chain A, Chemical Shift And Structure Assignments For Sma0114
Length = 123
Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 260 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSV---CGTYFG--G 314
E S M +A + +R+G I+ V + G P S +IL R+V T +G G
Sbjct: 34 EVAATASRMQEALDIARKGQFDIAIIDVNLDGEP-SYPVADILAERNVPFIFATGYGSKG 92
Query: 315 LKPR-SDIATLAQKYLDKEL 333
L R S+I L + +LD EL
Sbjct: 93 LDTRYSNIPLLTKPFLDSEL 112
>pdb|1OY5|A Chain A, Crystal Structure Of Trna (M1g37) Methyltransferase From
Aquifex Aeolicus
pdb|1OY5|B Chain B, Crystal Structure Of Trna (M1g37) Methyltransferase From
Aquifex Aeolicus
pdb|1OY5|C Chain C, Crystal Structure Of Trna (M1g37) Methyltransferase From
Aquifex Aeolicus
Length = 257
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 270 DAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS----VCGTYFGGLKPRSDIATLA 325
+A++ E +GK +L E G ++ + L + +CG Y G +
Sbjct: 72 EAYDYVVENYGKPFVLITEPWGEKLNQKLVNELSKKERIMIICGRYEG-------VDERV 124
Query: 326 QKYLDKELNLGEFI 339
+K +D E++LG+FI
Sbjct: 125 KKIVDMEISLGDFI 138
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 14/198 (7%)
Query: 175 AWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFIN 234
A + GV +G V + + A++++ D++ + K+ G +
Sbjct: 163 ACRRGGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQ 222
Query: 235 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI-LGVEMHGSP 293
+ + +++ ++ + EC G + + ++R G ++ LG E P
Sbjct: 223 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVP 282
Query: 294 I---SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 350
+ ++ ++I C T+ I+ LA K +N+ +TH +
Sbjct: 283 LLHAAIREVDIKGVFRYCNTW------PVAISXLA----SKSVNVKPLVTHRFPLEKALE 332
Query: 351 AFDLLLEGKSLRCIIWMD 368
AF+ +G L+ + D
Sbjct: 333 AFETFKKGLGLKIXLKCD 350
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 27/173 (15%)
Query: 23 EIRIKILCTSLCHSDV----TFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRD 78
++ I IL +CHSD+ + WK P+I D
Sbjct: 31 DVLIDILYAGICHSDIHSAYSEWKEGI------YPMIPGHEIAGIIKEVGKGVKKFKIGD 84
Query: 79 LV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS 137
+V + F C C+ CK + C+K Y D F + + ++
Sbjct: 85 VVGVGCFVNSCKACKPCKEHQEQFCTKVVFTY------DCLDSFHDNEP-------HMGG 131
Query: 138 FTEYSVVDITHVVKITPHIPL-GIACLLSCGVSTGVGAAWKVAGVEVGSTVAI 189
++ VVD +V+ + + PL +A LL G++T + K + V G+ V +
Sbjct: 132 YSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT--YSPLKFSKVTKGTKVGV 182
>pdb|3CT2|A Chain A, Crystal Structure Of Muconate Cycloisomerase From
Pseudomonas Fluorescens
pdb|3CT2|B Chain B, Crystal Structure Of Muconate Cycloisomerase From
Pseudomonas Fluorescens
pdb|3DGB|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Pseudomonas Fluorescens Complexed With Muconolactone
pdb|3FJ4|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Pseudomonas Fluorescens Complexed With Muconolactone
pdb|3FJ4|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Pseudomonas Fluorescens Complexed With Muconolactone
Length = 382
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 6/39 (15%)
Query: 255 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 293
AD EC+ DAFN +REG L + +G P
Sbjct: 250 ADESIECV------EDAFNLAREGAASVFALKIAKNGGP 282
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 147
C EC CK+ C+KF Y DG +++ + Y V
Sbjct: 100 CLECDRCKNDNEPYCTKFVTTYSQPY-EDG--------------YVSQGGYANYVRVHEH 144
Query: 148 HVVKITPHIPLGIACLLSCG 167
VV I +IP +A L CG
Sbjct: 145 FVVPIPENIPSHLAAPLLCG 164
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,129,860
Number of Sequences: 62578
Number of extensions: 382001
Number of successful extensions: 855
Number of sequences better than 100.0: 75
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 657
Number of HSP's gapped (non-prelim): 84
length of query: 371
length of database: 14,973,337
effective HSP length: 100
effective length of query: 271
effective length of database: 8,715,537
effective search space: 2361910527
effective search space used: 2361910527
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)